-- dump date 20140619_155447 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 350058000001 SEQ_END SEQ_END NC_008726.1 6491865 6491865 DR NC_008726.1; contig end 6491865..6491865 Mycobacterium vanbaalenii PYR-1 YP_950858.1 CDS dnaA NC_008726.1 249 1733 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 249..1733 Mycobacterium vanbaalenii PYR-1 4645044 YP_950859.1 CDS Mvan_0002 NC_008726.1 2309 3505 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2309..3505 Mycobacterium vanbaalenii PYR-1 4644034 YP_950860.1 CDS Mvan_0003 NC_008726.1 3537 4430 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 3537..4430 Mycobacterium vanbaalenii PYR-1 4643460 YP_950861.1 CDS recF NC_008726.1 4444 5604 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4444..5604 Mycobacterium vanbaalenii PYR-1 4646598 YP_950862.1 CDS Mvan_0005 NC_008726.1 5601 6158 D PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; hypothetical protein 5601..6158 Mycobacterium vanbaalenii PYR-1 4647690 YP_950863.1 CDS gyrB NC_008726.1 6390 8417 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6390..8417 Mycobacterium vanbaalenii PYR-1 4644531 YP_950864.1 CDS Mvan_0007 NC_008726.1 8449 12237 D KEGG: mmc:Mmcs_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain protein; DNA gyrase subunit A 8449..12237 Mycobacterium vanbaalenii PYR-1 4644532 YP_950865.1 CDS Mvan_0008 NC_008726.1 12238 13143 D KEGG: mmc:Mmcs_0008 hypothetical protein; hypothetical protein 12238..13143 Mycobacterium vanbaalenii PYR-1 4644533 YP_950866.1 CDS Mvan_0009 NC_008726.1 13523 13717 R KEGG: mmc:Mmcs_4655 hypothetical protein; hypothetical protein complement(13523..13717) Mycobacterium vanbaalenii PYR-1 4644536 YP_950867.1 CDS Mvan_0010 NC_008726.1 13823 14485 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_4654 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(13823..14485) Mycobacterium vanbaalenii PYR-1 4644537 YP_950868.1 CDS Mvan_0011 NC_008726.1 14567 15862 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_4653 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 14567..15862 Mycobacterium vanbaalenii PYR-1 4644538 YP_950869.1 CDS Mvan_0012 NC_008726.1 16015 17283 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_4652 cytochrome P450; cytochrome P450 16015..17283 Mycobacterium vanbaalenii PYR-1 4644539 YP_950870.1 CDS Mvan_0013 NC_008726.1 17306 18424 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_4651 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 17306..18424 Mycobacterium vanbaalenii PYR-1 4644540 YP_950871.1 CDS Mvan_0014 NC_008726.1 18488 20005 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4650 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 18488..20005 Mycobacterium vanbaalenii PYR-1 4644541 YP_950872.1 CDS Mvan_0015 NC_008726.1 20015 21550 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 20015..21550 Mycobacterium vanbaalenii PYR-1 4644542 YP_950873.1 CDS Mvan_0016 NC_008726.1 21673 22107 R KEGG: mbo:Mb0008c possible membrane protein; hypothetical protein complement(21673..22107) Mycobacterium vanbaalenii PYR-1 4644796 YP_950874.1 CDS Mvan_0017 NC_008726.1 22179 22742 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mmc:Mmcs_0010 peptidylprolyl isomerase; peptidyl-prolyl isomerase 22179..22742 Mycobacterium vanbaalenii PYR-1 4644797 YP_950875.1 CDS Mvan_0018 NC_008726.1 22791 23213 R KEGG: mmc:Mmcs_0011 hypothetical protein; hypothetical protein complement(22791..23213) Mycobacterium vanbaalenii PYR-1 4644798 YP_950876.1 CDS Mvan_0019 NC_008726.1 23369 23650 R integral membrane protein involved in inhibition of the Z-ring formation; putative septation inhibitor protein complement(23369..23650) Mycobacterium vanbaalenii PYR-1 4644799 YP_950877.1 CDS Mvan_0020 NC_008726.1 23716 24534 D PFAM: protein of unknown function DUF881; KEGG: mmc:Mmcs_0013 protein of unknown function DUF881; hypothetical protein 23716..24534 Mycobacterium vanbaalenii PYR-1 4644800 YP_950878.1 CDS Mvan_0021 NC_008726.1 24746 25918 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein; hypothetical protein 24746..25918 Mycobacterium vanbaalenii PYR-1 4644801 YP_950879.1 CDS Mvan_0022 NC_008726.1 25953 26627 D aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 25953..26627 Mycobacterium vanbaalenii PYR-1 4644802 YP_950880.1 CDS Mvan_0023 NC_008726.1 26605 28482 R PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0015 serine/threonine protein kinase; protein kinase complement(26605..28482) Mycobacterium vanbaalenii PYR-1 4644803 YP_950881.1 CDS Mvan_0024 NC_008726.1 28479 29771 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0016 serine/threonine protein kinase; protein kinase complement(28479..29771) Mycobacterium vanbaalenii PYR-1 4644804 YP_950882.1 CDS Mvan_0025 NC_008726.1 29875 31350 R PFAM: penicillin-binding protein, transpeptidase; KEGG: mmc:Mmcs_0017 peptidoglycan glycosyltransferase; penicillin-binding transpeptidase complement(29875..31350) Mycobacterium vanbaalenii PYR-1 4644805 YP_950883.1 CDS Mvan_0026 NC_008726.1 31347 32759 R PFAM: cell cycle protein; KEGG: mmc:Mmcs_0018 cell cycle protein; cell cycle protein complement(31347..32759) Mycobacterium vanbaalenii PYR-1 4644806 YP_950884.1 CDS Mvan_0027 NC_008726.1 32756 34309 R PFAM: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_0019 protein serine/threonine phosphatases; protein phosphatase 2C domain-containing protein complement(32756..34309) Mycobacterium vanbaalenii PYR-1 4644807 YP_950885.1 CDS Mvan_0028 NC_008726.1 34306 34812 R PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_0020 FHA domain containing protein; FHA domain-containing protein complement(34306..34812) Mycobacterium vanbaalenii PYR-1 4644808 YP_950886.1 CDS Mvan_0029 NC_008726.1 34934 36346 R PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_0021 FHA domain containing protein; FHA domain-containing protein complement(34934..36346) Mycobacterium vanbaalenii PYR-1 4644809 YP_950887.1 CDS Mvan_0030 NC_008726.1 36837 37739 R hypothetical protein complement(36837..37739) Mycobacterium vanbaalenii PYR-1 4644811 YP_950888.1 CDS Mvan_0031 NC_008726.1 37736 38185 R hypothetical protein complement(37736..38185) Mycobacterium vanbaalenii PYR-1 4644812 YP_950889.1 CDS Mvan_0032 NC_008726.1 38210 39631 R Fis family transcriptional regulator complement(38210..39631) Mycobacterium vanbaalenii PYR-1 4644813 YP_950890.1 CDS Mvan_0033 NC_008726.1 39801 41663 D KEGG: cdi:DIP2315 hypothetical DNA-binding protein; hypothetical protein 39801..41663 Mycobacterium vanbaalenii PYR-1 4644814 YP_950891.1 CDS Mvan_0034 NC_008726.1 41676 43310 D PFAM: N-6 DNA methylase; KEGG: mbo:Mb2777c possible type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase); N-6 DNA methylase 41676..43310 Mycobacterium vanbaalenii PYR-1 4644815 YP_950892.1 CDS Mvan_0035 NC_008726.1 43303 44505 D KEGG: ana:alr4602 type I site-specific deoxyribonuclease chain S; hypothetical protein 43303..44505 Mycobacterium vanbaalenii PYR-1 4644816 YP_950893.1 CDS Mvan_0036 NC_008726.1 44554 45648 D PFAM: protein of unknown function DUF1016; KEGG: ava:Ava_4508 protein of unknown function DUF1016; hypothetical protein 44554..45648 Mycobacterium vanbaalenii PYR-1 4644817 YP_950894.1 CDS Mvan_0037 NC_008726.1 45645 48830 D KEGG: cef:CE2329 putative type I restriction-modification system subunit R; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 45645..48830 Mycobacterium vanbaalenii PYR-1 4644891 YP_950895.1 CDS Mvan_0038 NC_008726.1 49139 49930 R PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cgb:cg1566 hypothetical protein; excinuclease ABC subunit C complement(49139..49930) Mycobacterium vanbaalenii PYR-1 4644892 YP_950896.1 CDS Mvan_0039 NC_008726.1 50159 50842 R hypothetical protein complement(50159..50842) Mycobacterium vanbaalenii PYR-1 4644893 YP_950897.1 CDS Mvan_0040 NC_008726.1 51521 52831 D PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2471 protein of unknown function DUF222; hypothetical protein 51521..52831 Mycobacterium vanbaalenii PYR-1 4644894 YP_950898.1 CDS Mvan_0041 NC_008726.1 52968 54452 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_2825 PE-PPE-like protein; hypothetical protein complement(52968..54452) Mycobacterium vanbaalenii PYR-1 4644895 YP_950899.1 CDS Mvan_0042 NC_008726.1 54714 56093 R PFAM: purine catabolism PurC domain protein; KEGG: mmc:Mmcs_5287 transcriptional regulator, CdaR; purine catabolism PurC domain-containing protein complement(54714..56093) Mycobacterium vanbaalenii PYR-1 4644896 YP_950900.1 CDS Mvan_0043 NC_008726.1 56236 57687 D PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_5286 amino acid permease-associated region; amino acid permease-associated protein 56236..57687 Mycobacterium vanbaalenii PYR-1 4644897 YP_950901.1 CDS Mvan_0044 NC_008726.1 57680 58372 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_5285 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 57680..58372 Mycobacterium vanbaalenii PYR-1 4644898 YP_950902.1 CDS Mvan_0045 NC_008726.1 58369 59133 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_5284 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 58369..59133 Mycobacterium vanbaalenii PYR-1 4644899 YP_950903.1 CDS Mvan_0046 NC_008726.1 59149 60114 D TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_5283 agmatinase, putative; putative agmatinase 59149..60114 Mycobacterium vanbaalenii PYR-1 4644900 YP_950904.1 CDS Mvan_0047 NC_008726.1 60111 60977 D PFAM: polysaccharide deacetylase; KEGG: mmc:Mmcs_5282 polysaccharide deacetylase; polysaccharide deacetylase 60111..60977 Mycobacterium vanbaalenii PYR-1 4644901 YP_950905.1 CDS Mvan_0048 NC_008726.1 60981 61526 R KEGG: mmc:Mmcs_0776 hypothetical protein; hypothetical protein complement(60981..61526) Mycobacterium vanbaalenii PYR-1 4644902 YP_950906.1 CDS Mvan_0049 NC_008726.1 61510 63393 R PFAM: protein of unknown function DUF1023; KEGG: mmc:Mmcs_0775 protein of unknown function DUF1023; hypothetical protein complement(61510..63393) Mycobacterium vanbaalenii PYR-1 4644903 YP_950907.1 CDS Mvan_0050 NC_008726.1 63451 63675 R hypothetical protein complement(63451..63675) Mycobacterium vanbaalenii PYR-1 4644904 YP_950908.1 CDS Mvan_0051 NC_008726.1 63824 65200 R TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: mtc:MT0378 divalent cation transporter, MgtE family; magnesium transporter complement(63824..65200) Mycobacterium vanbaalenii PYR-1 4644905 YP_950909.1 CDS Mvan_0052 NC_008726.1 65387 66511 D KEGG: mmc:Mmcs_4038 hypothetical protein; hypothetical protein 65387..66511 Mycobacterium vanbaalenii PYR-1 4644906 YP_950910.1 CDS Mvan_0053 NC_008726.1 66641 67330 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nfa:nfa35310 hypothetical protein; hydrolase complement(66641..67330) Mycobacterium vanbaalenii PYR-1 4644907 YP_950911.1 CDS Mvan_0054 NC_008726.1 67327 68442 R PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa35260 hypothetical protein; FAD dependent oxidoreductase complement(67327..68442) Mycobacterium vanbaalenii PYR-1 4644908 YP_950912.1 CDS Mvan_0055 NC_008726.1 68533 69078 D KEGG: cvi:CV1839 hypothetical protein; HD phosphohydrolase-like 68533..69078 Mycobacterium vanbaalenii PYR-1 4644909 YP_950913.1 CDS Mvan_0056 NC_008726.1 69075 69773 D PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rha:RHA1_ro06603 probable transcriptional regulator; UbiC transcription regulator-associated domain-containing protein 69075..69773 Mycobacterium vanbaalenii PYR-1 4644910 YP_950914.1 CDS Mvan_0057 NC_008726.1 69811 70416 D KEGG: sco:SCO6238 hypothetical protein; hypothetical protein 69811..70416 Mycobacterium vanbaalenii PYR-1 4644911 YP_950915.1 CDS Mvan_0058 NC_008726.1 70432 70644 R KEGG: mmc:Mmcs_4434 hypothetical protein; hypothetical protein complement(70432..70644) Mycobacterium vanbaalenii PYR-1 4644912 YP_950916.1 CDS Mvan_0059 NC_008726.1 70740 71237 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_0051 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 70740..71237 Mycobacterium vanbaalenii PYR-1 4644913 YP_950917.1 CDS Mvan_0060 NC_008726.1 71234 72040 R KEGG: mmc:Mmcs_0053 hypothetical protein; hypothetical protein complement(71234..72040) Mycobacterium vanbaalenii PYR-1 4644914 YP_950918.1 CDS Mvan_0061 NC_008726.1 72059 72400 R KEGG: mmc:Mmcs_0054 hypothetical protein; hypothetical protein complement(72059..72400) Mycobacterium vanbaalenii PYR-1 4644915 YP_950919.1 CDS Mvan_0062 NC_008726.1 72409 73374 R PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: mpa:MAP0031c hypothetical protein; pirin domain-containing protein complement(72409..73374) Mycobacterium vanbaalenii PYR-1 4645071 YP_950920.1 CDS Mvan_0063 NC_008726.1 73415 73801 R KEGG: mmu:22376 Wiskott-Aldrich syndrome homolog (human); hypothetical protein complement(73415..73801) Mycobacterium vanbaalenii PYR-1 4645072 YP_950921.1 CDS Mvan_0064 NC_008726.1 73869 74306 R PFAM: protein of unknown function DUF55; KEGG: mmc:Mmcs_0055 protein of unknown function DUF55; hypothetical protein complement(73869..74306) Mycobacterium vanbaalenii PYR-1 4645073 YP_950922.1 CDS Mvan_0065 NC_008726.1 74390 74659 D KEGG: mmc:Mmcs_0056 hypothetical protein; hypothetical protein 74390..74659 Mycobacterium vanbaalenii PYR-1 4645074 YP_950923.1 CDS Mvan_0066 NC_008726.1 74652 76211 D PFAM: carboxyl transferase; KEGG: mmc:Mmcs_2679 propionyl-CoA carboxylase; propionyl-CoA carboxylase 74652..76211 Mycobacterium vanbaalenii PYR-1 4645075 YP_950924.1 CDS Mvan_0067 NC_008726.1 76386 76679 R KEGG: mmc:Mmcs_0057 transcription factor WhiB; transcription factor WhiB complement(76386..76679) Mycobacterium vanbaalenii PYR-1 4645076 YP_950925.1 CDS Mvan_0068 NC_008726.1 77024 77764 D KEGG: mmc:Mmcs_0058 conserved hypothetical alanine rich protein; hypothetical protein 77024..77764 Mycobacterium vanbaalenii PYR-1 4645077 YP_950926.1 CDS Mvan_0069 NC_008726.1 77748 78920 R KEGG: mmc:Mmcs_0061 hypothetical protein; hypothetical protein complement(77748..78920) Mycobacterium vanbaalenii PYR-1 4645078 YP_950927.1 CDS Mvan_0070 NC_008726.1 79338 80189 D KEGG: mmc:Mmcs_0062 hypothetical protein; hypothetical protein 79338..80189 Mycobacterium vanbaalenii PYR-1 4645079 YP_950928.1 CDS Mvan_0071 NC_008726.1 80207 80713 D KEGG: mmc:Mmcs_0063 hypothetical protein; hypothetical protein 80207..80713 Mycobacterium vanbaalenii PYR-1 4645080 YP_950929.1 CDS Mvan_0072 NC_008726.1 80710 82434 D PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_0064 AAA ATPase, central region; ATPase central domain-containing protein 80710..82434 Mycobacterium vanbaalenii PYR-1 4645081 YP_950930.1 CDS Mvan_0073 NC_008726.1 82438 83925 D PFAM: protein of unknown function DUF690; KEGG: mmc:Mmcs_0065 protein of unknown function DUF690; hypothetical protein 82438..83925 Mycobacterium vanbaalenii PYR-1 4645082 YP_950931.1 CDS Mvan_0074 NC_008726.1 83922 86144 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: mmc:Mmcs_0066 cell division FtsK/SpoIIIE; cell division protein FtsK 83922..86144 Mycobacterium vanbaalenii PYR-1 4645083 YP_950932.1 CDS Mvan_0075 NC_008726.1 86144 87904 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: mmc:Mmcs_0067 cell division FtsK/SpoIIIE; cell division protein FtsK 86144..87904 Mycobacterium vanbaalenii PYR-1 4645084 YP_950933.1 CDS Mvan_0076 NC_008726.1 88073 88369 D KEGG: mmc:Mmcs_0068 PE-like protein; PE-like protein 88073..88369 Mycobacterium vanbaalenii PYR-1 4645085 YP_950934.1 CDS Mvan_0077 NC_008726.1 88399 89718 D PFAM: PPE protein; KEGG: mmc:Mmcs_0069 PPE protein; PPE protein 88399..89718 Mycobacterium vanbaalenii PYR-1 4645086 YP_950935.1 CDS Mvan_0078 NC_008726.1 89821 90126 D KEGG: mmc:Mmcs_0070 10 kDa culture filtrate antigen LHP (CFP10); 10 kDa culture filtrate antigen LHP 89821..90126 Mycobacterium vanbaalenii PYR-1 4645087 YP_950936.1 CDS Mvan_0079 NC_008726.1 90169 90450 D KEGG: mmc:Mmcs_0071 6 kDa early secretory antigenic target EsaT6 (EsaT-6); 6 kDa early secretory antigenic target EsaT6 90169..90450 Mycobacterium vanbaalenii PYR-1 4645088 YP_950937.1 CDS Mvan_0080 NC_008726.1 90551 91918 D KEGG: mmc:Mmcs_0072 conserved hypothetical proline and alanine rich protein; hypothetical protein 90551..91918 Mycobacterium vanbaalenii PYR-1 4645089 YP_950938.1 CDS Mvan_0081 NC_008726.1 91915 93441 D PFAM: protein of unknown function DUF571; KEGG: mmc:Mmcs_0073 protein of unknown function DUF571; hypothetical protein 91915..93441 Mycobacterium vanbaalenii PYR-1 4645090 YP_950939.1 CDS Mvan_0082 NC_008726.1 93451 94170 D KEGG: mmc:Mmcs_2468 hypothetical protein; hypothetical protein 93451..94170 Mycobacterium vanbaalenii PYR-1 4645091 YP_950940.1 CDS Mvan_0083 NC_008726.1 94167 94478 D KEGG: mmc:Mmcs_0074 hypothetical protein; hypothetical protein 94167..94478 Mycobacterium vanbaalenii PYR-1 4645092 YP_950941.1 CDS Mvan_0084 NC_008726.1 94479 95549 R KEGG: mmc:Mmcs_2469 hypothetical protein; hypothetical protein complement(94479..95549) Mycobacterium vanbaalenii PYR-1 4644967 YP_950942.1 CDS Mvan_0085 NC_008726.1 95565 97766 R KEGG: mmc:Mmcs_2470 conserved hypothetical alanine and proline rich protein; hypothetical protein complement(95565..97766) Mycobacterium vanbaalenii PYR-1 4644968 YP_950943.1 CDS Mvan_0086 NC_008726.1 97769 98962 R KEGG: mmc:Mmcs_2469 hypothetical protein; hypothetical protein complement(97769..98962) Mycobacterium vanbaalenii PYR-1 4644969 YP_950944.1 CDS Mvan_0087 NC_008726.1 99179 99544 R hypothetical protein complement(99179..99544) Mycobacterium vanbaalenii PYR-1 4644970 YP_950945.1 CDS Mvan_0088 NC_008726.1 99755 101167 R KEGG: mpa:MAP4333 hypothetical protein; hypothetical protein complement(99755..101167) Mycobacterium vanbaalenii PYR-1 4644971 YP_950946.1 CDS Mvan_0089 NC_008726.1 101172 101516 R KEGG: mmc:Mmcs_0075 hypothetical protein; hypothetical protein complement(101172..101516) Mycobacterium vanbaalenii PYR-1 4644972 YP_950947.1 CDS Mvan_0090 NC_008726.1 101516 103141 R KEGG: mmc:Mmcs_0076 hypothetical protein; hypothetical protein complement(101516..103141) Mycobacterium vanbaalenii PYR-1 4644973 YP_950948.1 CDS Mvan_0091 NC_008726.1 103173 104570 R KEGG: mmc:Mmcs_0077 putative conserved membrane protein; hypothetical protein complement(103173..104570) Mycobacterium vanbaalenii PYR-1 4644974 YP_950949.1 CDS Mvan_0092 NC_008726.1 104567 105913 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_0078 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(104567..105913) Mycobacterium vanbaalenii PYR-1 4644975 YP_950950.1 CDS Mvan_0093 NC_008726.1 106149 106406 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mmc:Mmcs_0079 phosphotransferase system, HPr; phosphotransferase system, phosphocarrier protein HPr complement(106149..106406) Mycobacterium vanbaalenii PYR-1 4644976 YP_950951.1 CDS Mvan_0094 NC_008726.1 106439 108409 R TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; PTS system fructose subfamily transporter subunit IIC complement(106439..108409) Mycobacterium vanbaalenii PYR-1 4644977 YP_950952.1 CDS Mvan_0095 NC_008726.1 108433 109410 R PFAM: PfkB domain protein; KEGG: mmc:Mmcs_0081 PfkB; ribokinase-like domain-containing protein complement(108433..109410) Mycobacterium vanbaalenii PYR-1 4644978 YP_950953.1 CDS Mvan_0096 NC_008726.1 109407 110186 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_0082 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(109407..110186) Mycobacterium vanbaalenii PYR-1 4644979 YP_950954.1 CDS Mvan_0097 NC_008726.1 110199 111989 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: mmc:Mmcs_0083 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 110199..111989 Mycobacterium vanbaalenii PYR-1 4644980 YP_950955.1 CDS Mvan_0098 NC_008726.1 111986 112225 R hypothetical protein complement(111986..112225) Mycobacterium vanbaalenii PYR-1 4644981 YP_950956.1 CDS Mvan_0099 NC_008726.1 112316 113290 D PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: mmc:Mmcs_0084 pirin-like protein; pirin domain-containing protein 112316..113290 Mycobacterium vanbaalenii PYR-1 4644982 YP_950957.1 CDS Mvan_0100 NC_008726.1 113294 115441 R KEGG: mmc:Mmcs_0085 membrane protein-like protein; hypothetical protein complement(113294..115441) Mycobacterium vanbaalenii PYR-1 4644983 YP_950958.1 CDS Mvan_0101 NC_008726.1 115441 115962 R KEGG: rha:RHA1_ro00767 hypothetical protein; hypothetical protein complement(115441..115962) Mycobacterium vanbaalenii PYR-1 4644984 YP_950959.1 CDS Mvan_0102 NC_008726.1 115955 116521 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0086 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(115955..116521) Mycobacterium vanbaalenii PYR-1 4644985 YP_950960.1 CDS Mvan_0103 NC_008726.1 116760 117323 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0087 transcriptional regulator, TetR family; TetR family transcriptional regulator 116760..117323 Mycobacterium vanbaalenii PYR-1 4644986 YP_950961.1 CDS Mvan_0104 NC_008726.1 117451 118380 D TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_0088 protein of unknown function Mtu_121; putative methyltransferase 117451..118380 Mycobacterium vanbaalenii PYR-1 4644987 YP_950962.1 CDS Mvan_0105 NC_008726.1 118588 120000 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0090 aldehyde dehydrogenase; aldehyde dehydrogenase 118588..120000 Mycobacterium vanbaalenii PYR-1 4644988 YP_950963.1 CDS Mvan_0106 NC_008726.1 120037 120900 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0091 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 120037..120900 Mycobacterium vanbaalenii PYR-1 4644989 YP_950964.1 CDS Mvan_0107 NC_008726.1 120942 121910 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_0092 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 120942..121910 Mycobacterium vanbaalenii PYR-1 4644990 YP_950965.1 CDS Mvan_0108 NC_008726.1 121979 122698 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_0093 haloacid dehalogenase, type II; haloacid dehalogenase 121979..122698 Mycobacterium vanbaalenii PYR-1 4644991 YP_950966.1 CDS Mvan_0109 NC_008726.1 122721 123431 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0094 methyltransferase type 11; type 11 methyltransferase 122721..123431 Mycobacterium vanbaalenii PYR-1 4648041 YP_950967.1 CDS Mvan_0110 NC_008726.1 123502 124035 D KEGG: mmc:Mmcs_1185 hypothetical protein; hypothetical protein 123502..124035 Mycobacterium vanbaalenii PYR-1 4648042 YP_950968.1 CDS Mvan_0111 NC_008726.1 124120 124743 D KEGG: sma:SAV7466 hypothetical protein; hypothetical protein 124120..124743 Mycobacterium vanbaalenii PYR-1 4648043 YP_950969.1 CDS Mvan_0112 NC_008726.1 124762 125247 D KEGG: mmc:Mmcs_0095 hypothetical protein; hypothetical protein 124762..125247 Mycobacterium vanbaalenii PYR-1 4648044 YP_950970.1 CDS Mvan_0113 NC_008726.1 125363 126295 R PFAM: alpha/beta hydrolase fold; KEGG: sal:Sala_2222 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(125363..126295) Mycobacterium vanbaalenii PYR-1 4648045 YP_950971.1 CDS Mvan_0114 NC_008726.1 126292 126891 R KEGG: bja:bll2019 transcriptional regulatory protein; MerR family transcriptional regulator complement(126292..126891) Mycobacterium vanbaalenii PYR-1 4648046 YP_950972.1 CDS Mvan_0115 NC_008726.1 127120 127920 R KEGG: mmc:Mmcs_0097 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase complement(127120..127920) Mycobacterium vanbaalenii PYR-1 4648047 YP_950973.1 CDS Mvan_0116 NC_008726.1 127920 129263 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0098 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(127920..129263) Mycobacterium vanbaalenii PYR-1 4648048 YP_950974.1 CDS Mvan_0117 NC_008726.1 129341 130897 D PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0400 FAD dependent oxidoreductase; FAD dependent oxidoreductase 129341..130897 Mycobacterium vanbaalenii PYR-1 4648049 YP_950975.1 CDS Mvan_0118 NC_008726.1 130861 131856 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_4344 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(130861..131856) Mycobacterium vanbaalenii PYR-1 4648050 YP_950976.1 CDS Mvan_0119 NC_008726.1 131994 133433 R PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: mmc:Mmcs_0100 NAD(P) transhydrogenase, beta subunit; NAD(P) transhydrogenase subunit beta complement(131994..133433) Mycobacterium vanbaalenii PYR-1 4648051 YP_950977.1 CDS pntA NC_008726.1 133438 134970 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(133438..134970) Mycobacterium vanbaalenii PYR-1 4648052 YP_950978.1 CDS Mvan_0121 NC_008726.1 135213 136091 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_0104 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 135213..136091 Mycobacterium vanbaalenii PYR-1 4648053 YP_950979.1 CDS Mvan_0122 NC_008726.1 136098 137135 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_0105 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 136098..137135 Mycobacterium vanbaalenii PYR-1 4648054 YP_950980.1 CDS Mvan_0123 NC_008726.1 137119 137898 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_0106 ABC transporter related; ABC transporter--like protein 137119..137898 Mycobacterium vanbaalenii PYR-1 4648055 YP_950981.1 CDS Mvan_0124 NC_008726.1 138027 138413 D hypothetical protein 138027..138413 Mycobacterium vanbaalenii PYR-1 4648056 YP_950982.1 CDS Mvan_0125 NC_008726.1 138398 138508 R KEGG: mtc:MT2026 hypothetical protein; hypothetical protein complement(138398..138508) Mycobacterium vanbaalenii PYR-1 4648057 YP_950983.1 CDS Mvan_0126 NC_008726.1 138638 139312 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0108 transcriptional regulator, TetR family; TetR family transcriptional regulator 138638..139312 Mycobacterium vanbaalenii PYR-1 4648058 YP_950984.1 CDS Mvan_0127 NC_008726.1 139343 140083 D PFAM: protein of unknown function DUF72; KEGG: mpa:MAP1580c hypothetical protein; hypothetical protein 139343..140083 Mycobacterium vanbaalenii PYR-1 4648059 YP_950985.1 CDS Mvan_0128 NC_008726.1 140086 140913 D PFAM: MscS Mechanosensitive ion channel; KEGG: mmc:Mmcs_1609 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 140086..140913 Mycobacterium vanbaalenii PYR-1 4648060 YP_950986.1 CDS Mvan_0129 NC_008726.1 140944 141384 D PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_0113 hypothetical protein; cyclase/dehydrase 140944..141384 Mycobacterium vanbaalenii PYR-1 4647023 YP_950987.1 CDS Mvan_0130 NC_008726.1 141608 142294 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_0114 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(141608..142294) Mycobacterium vanbaalenii PYR-1 4647024 YP_950988.1 CDS Mvan_0131 NC_008726.1 142383 144095 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 142383..144095 Mycobacterium vanbaalenii PYR-1 4647025 YP_950989.1 CDS Mvan_0132 NC_008726.1 144309 145106 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_0116 protein of unknown function DUF140; hypothetical protein 144309..145106 Mycobacterium vanbaalenii PYR-1 4647026 YP_950990.1 CDS Mvan_0133 NC_008726.1 145108 145977 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_0117 protein of unknown function DUF140; hypothetical protein 145108..145977 Mycobacterium vanbaalenii PYR-1 4647027 YP_950991.1 CDS Mvan_0134 NC_008726.1 145983 147209 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0118 mammalian cell entry; virulence factor Mce family protein 145983..147209 Mycobacterium vanbaalenii PYR-1 4647028 YP_950992.1 CDS Mvan_0135 NC_008726.1 147206 148237 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0119 mammalian cell entry; virulence factor Mce family protein 147206..148237 Mycobacterium vanbaalenii PYR-1 4647029 YP_950993.1 CDS Mvan_0136 NC_008726.1 148234 149805 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0120 mammalian cell entry; virulence factor Mce family protein 148234..149805 Mycobacterium vanbaalenii PYR-1 4647030 YP_950994.1 CDS Mvan_0137 NC_008726.1 149815 151449 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0121 mammalian cell entry; virulence factor Mce family protein 149815..151449 Mycobacterium vanbaalenii PYR-1 4647031 YP_950995.1 CDS Mvan_0138 NC_008726.1 151455 152600 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0122 mammalian cell entry; virulence factor Mce family protein 151455..152600 Mycobacterium vanbaalenii PYR-1 4647032 YP_950996.1 CDS Mvan_0139 NC_008726.1 152604 154166 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0123 mammalian cell entry; virulence factor Mce family protein 152604..154166 Mycobacterium vanbaalenii PYR-1 4647033 YP_950997.1 CDS Mvan_0140 NC_008726.1 154136 154780 D KEGG: mmc:Mmcs_0124 putative conserved MCE associated membrane protein; putative MCE associated membrane protein 154136..154780 Mycobacterium vanbaalenii PYR-1 4647034 YP_950998.1 CDS Mvan_0141 NC_008726.1 154777 155760 D PFAM: RDD domain containing protein; KEGG: mmc:Mmcs_0125 RDD domain containing protein; RDD domain-containing protein 154777..155760 Mycobacterium vanbaalenii PYR-1 4647035 YP_950999.1 CDS Mvan_0142 NC_008726.1 155757 156329 D KEGG: mmc:Mmcs_0126 hypothetical protein; hypothetical protein 155757..156329 Mycobacterium vanbaalenii PYR-1 4647036 YP_951000.1 CDS Mvan_0143 NC_008726.1 156296 157093 D KEGG: mmc:Mmcs_0127 hypothetical protein; hypothetical protein 156296..157093 Mycobacterium vanbaalenii PYR-1 4647037 YP_951001.1 CDS Mvan_0144 NC_008726.1 157146 158255 R KEGG: mtc:MT0188 hypothetical protein; hypothetical protein complement(157146..158255) Mycobacterium vanbaalenii PYR-1 4647038 YP_951002.1 CDS Mvan_0145 NC_008726.1 158449 158895 D PFAM: carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 158449..158895 Mycobacterium vanbaalenii PYR-1 4647039 YP_951003.1 CDS Mvan_0146 NC_008726.1 158892 160208 R KEGG: mmc:Mmcs_0134 SMP-30/gluconolaconase/LRE-like region; SMP-30/gluconolaconase/LRE-like region complement(158892..160208) Mycobacterium vanbaalenii PYR-1 4647040 YP_951004.1 CDS Mvan_0147 NC_008726.1 160186 160953 R PFAM: Pirin domain protein domain protein; KEGG: mmc:Mmcs_0135 pirin-like protein; pirin domain-containing protein complement(160186..160953) Mycobacterium vanbaalenii PYR-1 4647041 YP_951005.1 CDS Mvan_0148 NC_008726.1 161051 161506 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_0136 transcriptional regulator, MarR family; MarR family transcriptional regulator 161051..161506 Mycobacterium vanbaalenii PYR-1 4647042 YP_951006.1 CDS Mvan_0149 NC_008726.1 161503 162525 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(161503..162525) Mycobacterium vanbaalenii PYR-1 4647043 YP_951007.1 CDS Mvan_0150 NC_008726.1 162600 163439 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0140 acylglycerol lipase; alpha/beta hydrolase fold protein 162600..163439 Mycobacterium vanbaalenii PYR-1 4647044 YP_951008.1 CDS Mvan_0151 NC_008726.1 163436 164431 D KEGG: mmc:Mmcs_0141 putative secreted protein; hypothetical protein 163436..164431 Mycobacterium vanbaalenii PYR-1 4647045 YP_951009.1 CDS Mvan_0152 NC_008726.1 164454 165269 D KEGG: mmc:Mmcs_0142 hypothetical protein; hypothetical protein 164454..165269 Mycobacterium vanbaalenii PYR-1 4647046 YP_951010.1 CDS Mvan_0153 NC_008726.1 165266 165757 D KEGG: mmc:Mmcs_0143 hypothetical protein; hypothetical protein 165266..165757 Mycobacterium vanbaalenii PYR-1 4647047 YP_951011.1 CDS Mvan_0154 NC_008726.1 165768 166430 D PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; O-methyltransferase, family 3; KEGG: mmc:Mmcs_0144 O-methyltransferase, family 3; O-methyltransferase family protein 165768..166430 Mycobacterium vanbaalenii PYR-1 4645170 YP_951012.1 CDS Mvan_0155 NC_008726.1 166423 167154 R PFAM: regulatory proteins, IclR; KEGG: mbo:Mb1802c probable transcriptional regulatory protein; regulatory proteins IclR complement(166423..167154) Mycobacterium vanbaalenii PYR-1 4645171 YP_951013.1 CDS Mvan_0156 NC_008726.1 167223 168557 D PFAM: FAD linked oxidase domain protein; KEGG: mbo:Mb1803 probable oxidoreductase; FAD linked oxidase domain-containing protein 167223..168557 Mycobacterium vanbaalenii PYR-1 4645172 YP_951014.1 CDS Mvan_0157 NC_008726.1 168557 169330 D KEGG: mbo:Mb1804 hypothetical protein; hypothetical protein 168557..169330 Mycobacterium vanbaalenii PYR-1 4645173 YP_951015.1 CDS Mvan_0158 NC_008726.1 169356 169742 D KEGG: mmc:Mmcs_0145 hypothetical protein; hypothetical protein 169356..169742 Mycobacterium vanbaalenii PYR-1 4645174 YP_951016.1 CDS Mvan_0159 NC_008726.1 169744 170643 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: tfu:Tfu_1373 regulatory proteins, AsnC/Lrp; AsnC family transcriptional regulator complement(169744..170643) Mycobacterium vanbaalenii PYR-1 4645175 YP_951017.1 CDS Mvan_0160 NC_008726.1 170871 172457 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: sma:SAV791 transmembrane transport protein; cytosine/purines uracil thiamine allantoin permease 170871..172457 Mycobacterium vanbaalenii PYR-1 4645176 YP_951018.1 CDS Mvan_0161 NC_008726.1 172454 173443 D TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: tfu:Tfu_0058 putative agmatinase; putative agmatinase 172454..173443 Mycobacterium vanbaalenii PYR-1 4645177 YP_951019.1 CDS Mvan_0162 NC_008726.1 173613 174218 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rba:RB6078 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 factor 173613..174218 Mycobacterium vanbaalenii PYR-1 4645178 YP_951020.1 CDS Mvan_0163 NC_008726.1 174240 174704 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa24520 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(174240..174704) Mycobacterium vanbaalenii PYR-1 4645179 YP_951021.1 CDS Mvan_0164 NC_008726.1 174863 175168 D hypothetical protein 174863..175168 Mycobacterium vanbaalenii PYR-1 4645180 YP_951022.1 CDS Mvan_0165 NC_008726.1 175292 175528 D hypothetical protein 175292..175528 Mycobacterium vanbaalenii PYR-1 4645181 YP_951023.1 CDS Mvan_0166 NC_008726.1 175683 176117 D KEGG: mmc:Mmcs_2316 hypothetical protein; hypothetical protein 175683..176117 Mycobacterium vanbaalenii PYR-1 4645182 YP_951024.1 CDS Mvan_0167 NC_008726.1 176310 177698 D KEGG: mmc:Mmcs_5357 hypothetical protein; hypothetical protein 176310..177698 Mycobacterium vanbaalenii PYR-1 4645183 YP_951025.1 CDS Mvan_0168 NC_008726.1 177695 178516 R KEGG: mmc:Mmcs_2579 hypothetical protein; hypothetical protein complement(177695..178516) Mycobacterium vanbaalenii PYR-1 4645184 YP_951026.1 CDS Mvan_0169 NC_008726.1 178656 179477 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0702 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(178656..179477) Mycobacterium vanbaalenii PYR-1 4645185 YP_951027.1 CDS Mvan_0170 NC_008726.1 179603 180181 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0620 transcriptional regulator, TetR family; TetR family transcriptional regulator 179603..180181 Mycobacterium vanbaalenii PYR-1 4645186 YP_951028.1 CDS Mvan_0171 NC_008726.1 180200 180631 R KEGG: mmc:Mmcs_1831 hypothetical protein; hypothetical protein complement(180200..180631) Mycobacterium vanbaalenii PYR-1 4645187 YP_951029.1 CDS Mvan_0172 NC_008726.1 180742 181353 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpc:RPC_2485 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(180742..181353) Mycobacterium vanbaalenii PYR-1 4645188 YP_951030.1 CDS Mvan_0173 NC_008726.1 181363 183060 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(181363..183060) Mycobacterium vanbaalenii PYR-1 4645189 YP_951031.1 CDS Mvan_0174 NC_008726.1 183138 183755 D PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_0147 protein of unknown function DUF305; hypothetical protein 183138..183755 Mycobacterium vanbaalenii PYR-1 4645190 YP_951032.1 CDS Mvan_0175 NC_008726.1 183752 184189 D PFAM: protein of unknown function DUF156; KEGG: mmc:Mmcs_0148 protein of unknown function DUF156; hypothetical protein 183752..184189 Mycobacterium vanbaalenii PYR-1 4645191 YP_951033.1 CDS Mvan_0176 NC_008726.1 184206 184559 R PFAM: protein of unknown function DUF77; KEGG: cgb:cg1374 hypothetical protein; hypothetical protein complement(184206..184559) Mycobacterium vanbaalenii PYR-1 4645192 YP_951034.1 CDS Mvan_0177 NC_008726.1 184774 185799 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_0151 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 184774..185799 Mycobacterium vanbaalenii PYR-1 4645193 YP_951035.1 CDS Mvan_0178 NC_008726.1 185889 186836 D KEGG: mmc:Mmcs_0152 hypothetical protein; hypothetical protein 185889..186836 Mycobacterium vanbaalenii PYR-1 4647816 YP_951036.1 CDS Mvan_0179 NC_008726.1 186833 187315 D KEGG: mmc:Mmcs_0153 hypothetical protein; hypothetical protein 186833..187315 Mycobacterium vanbaalenii PYR-1 4647817 YP_951037.1 CDS Mvan_0180 NC_008726.1 187312 188274 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_0154 ATPase associated with various cellular activities, AAA_3; ATPase 187312..188274 Mycobacterium vanbaalenii PYR-1 4647818 YP_951038.1 CDS Mvan_0181 NC_008726.1 188271 189488 D PFAM: protein of unknown function DUF58; KEGG: mmc:Mmcs_0155 protein of unknown function DUF58; hypothetical protein 188271..189488 Mycobacterium vanbaalenii PYR-1 4647819 YP_951039.1 CDS Mvan_0182 NC_008726.1 189527 189895 D KEGG: mmc:Mmcs_0156 hypothetical protein; hypothetical protein 189527..189895 Mycobacterium vanbaalenii PYR-1 4647820 YP_951040.1 CDS Mvan_0184 NC_008726.1 190402 192423 R PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mmc:Mmcs_0157 neprilysin; neprilysin complement(190402..192423) Mycobacterium vanbaalenii PYR-1 4647822 YP_951041.1 CDS Mvan_0185 NC_008726.1 192464 193060 D KEGG: mmc:Mmcs_0158 hypothetical protein; hypothetical protein 192464..193060 Mycobacterium vanbaalenii PYR-1 4647823 YP_951042.1 CDS Mvan_0186 NC_008726.1 193057 193746 D KEGG: mmc:Mmcs_0159 putative conserved transmembrane protein; putative transmembrane protein 193057..193746 Mycobacterium vanbaalenii PYR-1 4647824 YP_951043.1 CDS Mvan_0187 NC_008726.1 193844 194338 R KEGG: mmc:Mmcs_0161 hypothetical protein; hypothetical protein complement(193844..194338) Mycobacterium vanbaalenii PYR-1 4647825 YP_951044.1 CDS Mvan_0188 NC_008726.1 194338 197244 R KEGG: mmc:Mmcs_0162 MmpL11; MmpL11 complement(194338..197244) Mycobacterium vanbaalenii PYR-1 4647826 YP_951045.1 CDS Mvan_0189 NC_008726.1 197526 197948 D KEGG: mmc:Mmcs_0163 hypothetical protein; Fis family transcriptional regulator 197526..197948 Mycobacterium vanbaalenii PYR-1 4647827 YP_951046.1 CDS Mvan_0190 NC_008726.1 198083 198475 D KEGG: mmc:Mmcs_0164 hypothetical protein; hypothetical protein 198083..198475 Mycobacterium vanbaalenii PYR-1 4647828 YP_951047.1 CDS Mvan_0191 NC_008726.1 198493 199227 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_0165 two component transcriptional regulator, winged helix family; two component transcriptional regulator 198493..199227 Mycobacterium vanbaalenii PYR-1 4647829 YP_951048.1 CDS Mvan_0192 NC_008726.1 199238 200590 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_0166 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 199238..200590 Mycobacterium vanbaalenii PYR-1 4647830 YP_951049.1 CDS Mvan_0193 NC_008726.1 200579 201025 R KEGG: mmc:Mmcs_0167 putative conserved transmembrane protein; putative transmembrane protein complement(200579..201025) Mycobacterium vanbaalenii PYR-1 4647831 YP_951050.1 CDS Mvan_0194 NC_008726.1 200997 202175 R PFAM: conserved hypothetical protein 374; KEGG: mmc:Mmcs_0168 conserved hypothetical protein 374; hypothetical protein complement(200997..202175) Mycobacterium vanbaalenii PYR-1 4647832 YP_951051.1 CDS Mvan_0195 NC_008726.1 202253 203407 D PFAM: protein of unknown function UPF0118; KEGG: mmc:Mmcs_0169 protein of unknown function UPF0118; hypothetical protein 202253..203407 Mycobacterium vanbaalenii PYR-1 4647833 YP_951052.1 CDS Mvan_0196 NC_008726.1 203416 206457 R KEGG: mtu:Rv0206c conserved large membrane protein; large membrane protein complement(203416..206457) Mycobacterium vanbaalenii PYR-1 4647834 YP_951053.1 CDS Mvan_0197 NC_008726.1 206533 207252 R KEGG: mmc:Mmcs_0172 hypothetical protein; hypothetical protein complement(206533..207252) Mycobacterium vanbaalenii PYR-1 4647835 YP_951054.1 CDS trmB NC_008726.1 207249 208049 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(207249..208049) Mycobacterium vanbaalenii PYR-1 4647836 YP_951055.1 CDS Mvan_0199 NC_008726.1 208291 209199 D KEGG: mmc:Mmcs_0174 hypothetical protein; hypothetical protein 208291..209199 Mycobacterium vanbaalenii PYR-1 4647837 YP_951056.1 CDS Mvan_0200 NC_008726.1 209196 210455 D KEGG: mbo:Mb0216 hypothetical protein; hypothetical protein 209196..210455 Mycobacterium vanbaalenii PYR-1 4647838 YP_951057.1 CDS Mvan_0201 NC_008726.1 210603 212432 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 210603..212432 Mycobacterium vanbaalenii PYR-1 4647839 YP_951058.1 CDS Mvan_0202 NC_008726.1 212524 213084 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1490 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(212524..213084) Mycobacterium vanbaalenii PYR-1 4647840 YP_951059.1 CDS Mvan_0203 NC_008726.1 213297 214691 D PFAM: Carotenoid oxygenase; KEGG: mpa:MAP1324 lignostilbene-alpha,beta-dioxygenase; carotenoid oxygenase 213297..214691 Mycobacterium vanbaalenii PYR-1 4647716 YP_951060.1 CDS Mvan_0204 NC_008726.1 214705 215913 R catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase complement(214705..215913) Mycobacterium vanbaalenii PYR-1 4647717 YP_951061.1 CDS Mvan_0205 NC_008726.1 216012 216962 D PFAM: luciferase family protein; KEGG: fra:Francci3_2659 luciferase-like; luciferase family protein 216012..216962 Mycobacterium vanbaalenii PYR-1 4647718 YP_951062.1 CDS Mvan_0206 NC_008726.1 216974 218425 R KEGG: bth:BT1012 hypothetical protein; hypothetical protein complement(216974..218425) Mycobacterium vanbaalenii PYR-1 4647719 YP_951063.1 CDS Mvan_0207 NC_008726.1 218429 220174 R KEGG: rha:RHA1_ro05770 hypothetical protein; hypothetical protein complement(218429..220174) Mycobacterium vanbaalenii PYR-1 4647720 YP_951064.1 CDS Mvan_0208 NC_008726.1 220171 220554 R KEGG: rha:RHA1_ro05770 hypothetical protein; hypothetical protein complement(220171..220554) Mycobacterium vanbaalenii PYR-1 4647721 YP_951065.1 CDS Mvan_0209 NC_008726.1 220551 221291 R PFAM: glycoside hydrolase, family 16; KEGG: bfs:BF4060 putative beta-glucanase; glycoside hydrolase family protein complement(220551..221291) Mycobacterium vanbaalenii PYR-1 4647722 YP_951066.1 CDS Mvan_0210 NC_008726.1 221304 222659 R KEGG: sma:SAV6570 hypothetical protein; hypothetical protein complement(221304..222659) Mycobacterium vanbaalenii PYR-1 4647723 YP_951067.1 CDS Mvan_0211 NC_008726.1 222656 224527 R PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1580 glycosyl transferase, family 2; glycosyl transferase family protein complement(222656..224527) Mycobacterium vanbaalenii PYR-1 4647724 YP_951068.1 CDS Mvan_0212 NC_008726.1 224524 225603 R PFAM: C-methyltransferase; KEGG: nha:Nham_2770 methyltransferase type 12; C-methyltransferase complement(224524..225603) Mycobacterium vanbaalenii PYR-1 4647725 YP_951069.1 CDS Mvan_0213 NC_008726.1 225618 226172 D KEGG: rha:RHA1_ro05744 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 225618..226172 Mycobacterium vanbaalenii PYR-1 4647726 YP_951070.1 CDS Mvan_0214 NC_008726.1 226156 227184 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: sco:SCO0395 epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(226156..227184) Mycobacterium vanbaalenii PYR-1 4647727 YP_951071.1 CDS Mvan_0216 NC_008726.1 228490 229269 R TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: nha:Nham_2767 nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase complement(228490..229269) Mycobacterium vanbaalenii PYR-1 4647729 YP_951072.1 CDS Mvan_0217 NC_008726.1 229453 230304 R PFAM: glycosyl transferase, family 2; KEGG: sma:SAV6573 glycosyltransferase; glycosyl transferase family protein complement(229453..230304) Mycobacterium vanbaalenii PYR-1 4647730 YP_951073.1 CDS Mvan_0218 NC_008726.1 230995 232545 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 230995..232545 Mycobacterium vanbaalenii PYR-1 4647731 YP_951074.1 CDS Mvan_0219 NC_008726.1 232542 233429 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_0178 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 232542..233429 Mycobacterium vanbaalenii PYR-1 4647732 YP_951075.1 CDS Mvan_0220 NC_008726.1 233473 234195 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_0181 UbiC transcription regulator-associated; regulatory protein GntR complement(233473..234195) Mycobacterium vanbaalenii PYR-1 4647733 YP_951076.1 CDS Mvan_0221 NC_008726.1 234195 235352 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0182 butyryl-CoA dehydrogenase; butyryl-CoA dehydrogenase complement(234195..235352) Mycobacterium vanbaalenii PYR-1 4647734 YP_951077.1 CDS Mvan_0222 NC_008726.1 235459 236445 D KEGG: mmc:Mmcs_0183 hypothetical protein; hypothetical protein 235459..236445 Mycobacterium vanbaalenii PYR-1 4647735 YP_951078.1 CDS Mvan_0223 NC_008726.1 236520 237659 D KEGG: mmc:Mmcs_0184 hypothetical protein; hypothetical protein 236520..237659 Mycobacterium vanbaalenii PYR-1 4647736 YP_951079.1 CDS Mvan_0224 NC_008726.1 237653 238939 D PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3; amidohydrolase 3 237653..238939 Mycobacterium vanbaalenii PYR-1 4647737 YP_951080.1 CDS Mvan_0225 NC_008726.1 238944 239885 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0200 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein complement(238944..239885) Mycobacterium vanbaalenii PYR-1 4647738 YP_951081.1 CDS Mvan_0226 NC_008726.1 239889 242090 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0201 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(239889..242090) Mycobacterium vanbaalenii PYR-1 4647739 YP_951082.1 CDS Mvan_0227 NC_008726.1 242257 243480 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0202 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein 242257..243480 Mycobacterium vanbaalenii PYR-1 4647740 YP_951083.1 CDS Mvan_0228 NC_008726.1 243506 244936 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_0203 protein of unknown function UPF0089; hypothetical protein 243506..244936 Mycobacterium vanbaalenii PYR-1 4647966 YP_951084.1 CDS Mvan_0229 NC_008726.1 245021 245392 R hypothetical protein complement(245021..245392) Mycobacterium vanbaalenii PYR-1 4647967 YP_951085.1 CDS Mvan_0230 NC_008726.1 245470 246039 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0857 transcriptional regulator, TetR family; TetR family transcriptional regulator 245470..246039 Mycobacterium vanbaalenii PYR-1 4647968 YP_951086.1 CDS Mvan_0231 NC_008726.1 246036 247274 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0204 LipO; alpha/beta hydrolase domain-containing protein complement(246036..247274) Mycobacterium vanbaalenii PYR-1 4647969 YP_951087.1 CDS Mvan_0232 NC_008726.1 247277 248911 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(247277..248911) Mycobacterium vanbaalenii PYR-1 4647970 YP_951088.1 CDS Mvan_0233 NC_008726.1 248916 249725 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_0205 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(248916..249725) Mycobacterium vanbaalenii PYR-1 4647971 YP_951089.1 CDS Mvan_0234 NC_008726.1 249922 250605 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0499 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(249922..250605) Mycobacterium vanbaalenii PYR-1 4647972 YP_951090.1 CDS Mvan_0235 NC_008726.1 250816 251652 D PFAM: N-acetyltransferase; KEGG: mmc:Mmcs_0211 arylamine N-acetyltransferase; arylamine N-acetyltransferase 250816..251652 Mycobacterium vanbaalenii PYR-1 4647973 YP_951091.1 CDS Mvan_0236 NC_008726.1 251709 252764 D SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_0214 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 251709..252764 Mycobacterium vanbaalenii PYR-1 4647974 YP_951092.1 CDS Mvan_0237 NC_008726.1 252765 253286 D KEGG: mmc:Mmcs_0215 bifunctional deaminase-reductase-like protein; bifunctional deaminase-reductase-like protein 252765..253286 Mycobacterium vanbaalenii PYR-1 4647975 YP_951093.1 CDS Mvan_0238 NC_008726.1 253337 255172 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 253337..255172 Mycobacterium vanbaalenii PYR-1 4647976 YP_951094.1 CDS Mvan_0239 NC_008726.1 255198 255614 D KEGG: mmc:Mmcs_4023 hypothetical protein; hypothetical protein 255198..255614 Mycobacterium vanbaalenii PYR-1 4647977 YP_951095.1 CDS Mvan_0240 NC_008726.1 255701 257176 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0217 aldehyde dehydrogenase; betaine-aldehyde dehydrogenase complement(255701..257176) Mycobacterium vanbaalenii PYR-1 4647978 YP_951096.1 CDS Mvan_0241 NC_008726.1 257231 257998 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0218 methyltransferase type 11; type 11 methyltransferase complement(257231..257998) Mycobacterium vanbaalenii PYR-1 4647979 YP_951097.1 CDS Mvan_0242 NC_008726.1 258037 259197 D PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3664 hypothetical protein; group 1 glycosyl transferase 258037..259197 Mycobacterium vanbaalenii PYR-1 4647980 YP_951098.1 CDS Mvan_0243 NC_008726.1 259305 261959 D PFAM: regulatory protein, LuxR; SMART: AAA ATPase; KEGG: mpa:MAP1875c hypothetical protein; regulatory protein LuxR 259305..261959 Mycobacterium vanbaalenii PYR-1 4647981 YP_951099.1 CDS Mvan_0244 NC_008726.1 261978 264584 R PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: nfa:nfa53720 putative transcriptional regulator; response regulator receiver protein complement(261978..264584) Mycobacterium vanbaalenii PYR-1 4647982 YP_951100.1 CDS Mvan_0245 NC_008726.1 264735 266132 D PFAM: cytochrome P450; KEGG: mpa:MAP1344 hypothetical protein; cytochrome P450 264735..266132 Mycobacterium vanbaalenii PYR-1 4647983 YP_951101.1 CDS Mvan_0246 NC_008726.1 266206 267426 R PFAM: cytochrome P450; KEGG: mpa:MAP3818 hypothetical protein; cytochrome P450 complement(266206..267426) Mycobacterium vanbaalenii PYR-1 4647984 YP_951102.1 CDS Mvan_0247 NC_008726.1 267569 268597 D KEGG: mmc:Mmcs_5145 hypothetical protein; hypothetical protein 267569..268597 Mycobacterium vanbaalenii PYR-1 4647985 YP_951103.1 CDS Mvan_0248 NC_008726.1 268608 268868 D KEGG: mmc:Mmcs_5144 hypothetical protein; hypothetical protein 268608..268868 Mycobacterium vanbaalenii PYR-1 4647986 YP_951104.1 CDS Mvan_0249 NC_008726.1 268809 270512 R KEGG: mmc:Mmcs_0220 hypothetical protein; hypothetical protein complement(268809..270512) Mycobacterium vanbaalenii PYR-1 4647987 YP_951105.1 CDS Mvan_0250 NC_008726.1 270572 271777 R KEGG: mmc:Mmcs_0221 hypothetical protein; hypothetical protein complement(270572..271777) Mycobacterium vanbaalenii PYR-1 4647988 YP_951106.1 CDS Mvan_0251 NC_008726.1 271954 273138 D PFAM: acyltransferase 3; KEGG: mmc:Mmcs_0222 acyltransferase 3; acyltransferase 3 271954..273138 Mycobacterium vanbaalenii PYR-1 4647989 YP_951107.1 CDS Mvan_0252 NC_008726.1 273212 274666 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_0223 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(273212..274666) Mycobacterium vanbaalenii PYR-1 4647990 YP_951108.1 CDS Mvan_0253 NC_008726.1 274668 278894 R KEGG: mmc:Mmcs_0226 putative conserved transmembrane protein; putative transmembrane protein complement(274668..278894) Mycobacterium vanbaalenii PYR-1 4647399 YP_951109.1 CDS Mvan_0254 NC_008726.1 278929 279102 R KEGG: mmc:Mmcs_0227 small secreted protein; small secreted protein complement(278929..279102) Mycobacterium vanbaalenii PYR-1 4647400 YP_951110.1 CDS Mvan_0255 NC_008726.1 279128 279616 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_0228 UspA; UspA domain-containing protein complement(279128..279616) Mycobacterium vanbaalenii PYR-1 4647401 YP_951111.1 CDS Mvan_0256 NC_008726.1 279751 280953 D PFAM: glycoside hydrolase, family 3 domain protein; KEGG: mmc:Mmcs_0229 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 279751..280953 Mycobacterium vanbaalenii PYR-1 4647402 YP_951112.1 CDS Mvan_0257 NC_008726.1 281018 281647 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0236 transcriptional regulator, TetR family; TetR family transcriptional regulator 281018..281647 Mycobacterium vanbaalenii PYR-1 4647403 YP_951113.1 CDS Mvan_0258 NC_008726.1 281634 282488 R PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_0239 MaoC-like dehydratase; dehydratase complement(281634..282488) Mycobacterium vanbaalenii PYR-1 4647404 YP_951114.1 CDS fabG NC_008726.1 282491 283930 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(282491..283930) Mycobacterium vanbaalenii PYR-1 4647405 YP_951115.1 CDS Mvan_0260 NC_008726.1 283966 285306 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 283966..285306 Mycobacterium vanbaalenii PYR-1 4647406 YP_951116.1 CDS Mvan_0261 NC_008726.1 285447 286376 D PFAM: luciferase family protein; KEGG: nfa:nfa26250 hypothetical protein; luciferase family protein 285447..286376 Mycobacterium vanbaalenii PYR-1 4647407 YP_951117.1 CDS Mvan_0262 NC_008726.1 286551 287948 D PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: nfa:nfa22880 putative two-component system sensor kinase; putative signal transduction histidine kinase 286551..287948 Mycobacterium vanbaalenii PYR-1 4647408 YP_951118.1 CDS Mvan_0263 NC_008726.1 287945 288589 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: nfa:nfa22890 putative two-component system response regulator; two component LuxR family transcriptional regulator 287945..288589 Mycobacterium vanbaalenii PYR-1 4647409 YP_951119.1 CDS Mvan_0264 NC_008726.1 288611 288880 D hypothetical protein 288611..288880 Mycobacterium vanbaalenii PYR-1 4647410 YP_951120.1 CDS Mvan_0265 NC_008726.1 288980 290815 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP3694c FadE5; acyl-CoA dehydrogenase domain-containing protein complement(288980..290815) Mycobacterium vanbaalenii PYR-1 4647411 YP_951121.1 CDS Mvan_0266 NC_008726.1 291056 292144 D PFAM: dihydrodipicolinate reductase; KEGG: nfa:nfa27230 hypothetical protein; dihydrodipicolinate reductase 291056..292144 Mycobacterium vanbaalenii PYR-1 4647412 YP_951122.1 CDS Mvan_0267 NC_008726.1 292141 292932 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0271 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(292141..292932) Mycobacterium vanbaalenii PYR-1 4647565 YP_951123.1 CDS Mvan_0268 NC_008726.1 292952 293443 R PFAM: TspO/MBR family protein; KEGG: xcv:XCV1865 putative tryptophan-rich sensory protein; TspO and MBR like proteins complement(292952..293443) Mycobacterium vanbaalenii PYR-1 4647566 YP_951124.1 CDS Mvan_0269 NC_008726.1 293453 304483 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR; KEGG: mmc:Mmcs_0244 beta-ketoacyl synthase; beta-ketoacyl synthase complement(293453..304483) Mycobacterium vanbaalenii PYR-1 4647567 YP_951125.1 CDS Mvan_0270 NC_008726.1 304714 306135 D PFAM: condensation domain protein; KEGG: mmc:Mmcs_0245 PapA3_1; condensation domain-containing protein 304714..306135 Mycobacterium vanbaalenii PYR-1 4647568 YP_951126.1 CDS Mvan_0271 NC_008726.1 306163 309165 D TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_0246 transport protein; transport protein 306163..309165 Mycobacterium vanbaalenii PYR-1 4647569 YP_951127.1 CDS Mvan_0272 NC_008726.1 309258 310979 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 309258..310979 Mycobacterium vanbaalenii PYR-1 4647570 YP_951128.1 CDS Mvan_0273 NC_008726.1 311224 312624 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2471 protein of unknown function DUF222; hypothetical protein complement(311224..312624) Mycobacterium vanbaalenii PYR-1 4647571 YP_951129.1 CDS Mvan_0274 NC_008726.1 313106 313531 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rha:RHA1_ro00170 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 313106..313531 Mycobacterium vanbaalenii PYR-1 4647572 YP_951130.1 CDS Mvan_0275 NC_008726.1 313528 314109 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP3635 hypothetical protein; TetR family transcriptional regulator 313528..314109 Mycobacterium vanbaalenii PYR-1 4647573 YP_951131.1 CDS Mvan_0276 NC_008726.1 314202 315368 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_0248 PE-PPE-like protein; hypothetical protein 314202..315368 Mycobacterium vanbaalenii PYR-1 4647574 YP_951132.1 CDS Mvan_0277 NC_008726.1 315383 316045 R KEGG: mmc:Mmcs_0249 hypothetical protein; hypothetical protein complement(315383..316045) Mycobacterium vanbaalenii PYR-1 4647575 YP_951133.1 CDS Mvan_0278 NC_008726.1 316143 316346 D KEGG: mpa:MAP3695 hypothetical protein; hypothetical protein 316143..316346 Mycobacterium vanbaalenii PYR-1 4647576 YP_951134.1 CDS Mvan_0279 NC_008726.1 316355 316858 D PFAM: flavin reductase domain protein, FMN-binding; KEGG: mmc:Mmcs_0250 flavin reductase-like, FMN-binding protein; flavin reductase domain-containing protein 316355..316858 Mycobacterium vanbaalenii PYR-1 4647577 YP_951135.1 CDS Mvan_0280 NC_008726.1 316880 317041 R KEGG: mmc:Mmcs_0251 hypothetical protein; hypothetical protein complement(316880..317041) Mycobacterium vanbaalenii PYR-1 4647578 YP_951136.1 CDS Mvan_0281 NC_008726.1 317127 318899 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa40720 putative acyl-coA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(317127..318899) Mycobacterium vanbaalenii PYR-1 4647579 YP_951137.1 CDS Mvan_0282 NC_008726.1 318972 319415 R KEGG: mtc:MT1786 hypothetical protein; hypothetical protein complement(318972..319415) Mycobacterium vanbaalenii PYR-1 4647580 YP_951138.1 CDS Mvan_0283 NC_008726.1 319445 320200 R catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source; fumarate reductase iron-sulfur subunit complement(319445..320200) Mycobacterium vanbaalenii PYR-1 4647581 YP_951139.1 CDS sdhA NC_008726.1 320203 322086 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(320203..322086) Mycobacterium vanbaalenii PYR-1 4647582 YP_951140.1 CDS Mvan_0285 NC_008726.1 322104 322658 R PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10114 possible transposase, C-terminal; transposase, IS4 family protein complement(322104..322658) Mycobacterium vanbaalenii PYR-1 4647583 YP_951141.1 CDS Mvan_0286 NC_008726.1 322606 323001 R KEGG: lxx:Lxx02410 transposase; transposase complement(322606..323001) Mycobacterium vanbaalenii PYR-1 4647584 YP_951142.1 CDS Mvan_0287 NC_008726.1 323109 323930 R KEGG: mmc:Mmcs_0254 putative succinate dehydrogenase (membrane anchor subunit) (succinic dehydrogenase); putative succinate dehydrogenase membrane anchor subunit complement(323109..323930) Mycobacterium vanbaalenii PYR-1 4647585 YP_951143.1 CDS Mvan_0288 NC_008726.1 323972 324208 R KEGG: mmc:Mmcs_0255 hypothetical protein; hypothetical protein complement(323972..324208) Mycobacterium vanbaalenii PYR-1 4647586 YP_951144.1 CDS Mvan_0289 NC_008726.1 324383 325141 D KEGG: mmc:Mmcs_0256 hypothetical protein; hypothetical protein 324383..325141 Mycobacterium vanbaalenii PYR-1 4647587 YP_951145.1 CDS Mvan_0290 NC_008726.1 325170 326291 R PFAM: Acetamidase/Formamidase; KEGG: fra:Francci3_3746 conserved hypothetical protein; acetamidase/formamidase complement(325170..326291) Mycobacterium vanbaalenii PYR-1 4647588 YP_951146.1 CDS Mvan_0291 NC_008726.1 326288 326725 R PFAM: Endoribonuclease L-PSP; KEGG: mmc:Mmcs_3521 endoribonuclease L-PSP; endoribonuclease L-PSP complement(326288..326725) Mycobacterium vanbaalenii PYR-1 4647589 YP_951147.1 CDS Mvan_0292 NC_008726.1 326722 328254 R KEGG: bja:blr4464 probable ABC transporter ATP-binding/permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; polar amino acid ABC transporter inner membrane subunit complement(326722..328254) Mycobacterium vanbaalenii PYR-1 4643359 YP_951148.1 CDS Mvan_0293 NC_008726.1 328310 329218 R PFAM: extracellular solute-binding protein, family 3; KEGG: bja:blr4463 probable ABC transporter substrate-binding protein; extracellular solute-binding protein complement(328310..329218) Mycobacterium vanbaalenii PYR-1 4643360 YP_951149.1 CDS Mvan_0294 NC_008726.1 329451 330161 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rso:RSc1078 probable transcriptional regulatory DNA-binding transcription regulator protein; GntR family transcriptional regulator 329451..330161 Mycobacterium vanbaalenii PYR-1 4643361 YP_951150.1 CDS Mvan_0295 NC_008726.1 330200 330661 R KEGG: mpa:MAP0176 hypothetical protein; hypothetical protein complement(330200..330661) Mycobacterium vanbaalenii PYR-1 4643362 YP_951151.1 CDS Mvan_0296 NC_008726.1 330688 331119 R PFAM: heat shock protein Hsp20; KEGG: mpa:MAP3701c Hsp; heat shock protein Hsp20 complement(330688..331119) Mycobacterium vanbaalenii PYR-1 4643363 YP_951152.1 CDS Mvan_0297 NC_008726.1 331318 333873 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_0258 nitrite reductase (NAD(P)H) large subunit, NirB; nitrite reductase (NAD(P)H) large subunit 331318..333873 Mycobacterium vanbaalenii PYR-1 4643364 YP_951153.1 CDS Mvan_0298 NC_008726.1 333881 334228 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: mbo:Mb0259 probable nitrite reductase [NAD(P)H] small subunit NirD; nitrite reductase (NAD(P)H) small subunit 333881..334228 Mycobacterium vanbaalenii PYR-1 4643365 YP_951154.1 CDS Mvan_0299 NC_008726.1 334358 334711 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_2719 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 334358..334711 Mycobacterium vanbaalenii PYR-1 4643366 YP_951155.1 CDS Mvan_0300 NC_008726.1 334715 335455 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mmc:Mmcs_0262 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(334715..335455) Mycobacterium vanbaalenii PYR-1 4643367 YP_951156.1 CDS Mvan_0301 NC_008726.1 335452 336594 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein complement(335452..336594) Mycobacterium vanbaalenii PYR-1 4643368 YP_951157.1 CDS Mvan_0302 NC_008726.1 336722 337264 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_0265 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(336722..337264) Mycobacterium vanbaalenii PYR-1 4643369 YP_951158.1 CDS Mvan_0303 NC_008726.1 337275 338219 R TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: mmc:Mmcs_0267 allophanate hydrolase subunit 2; urea amidolyase -like protein complement(337275..338219) Mycobacterium vanbaalenii PYR-1 4643370 YP_951159.1 CDS Mvan_0304 NC_008726.1 338216 338923 R PFAM: Allophanate hydrolase subunit 1; KEGG: mmc:Mmcs_0268 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(338216..338923) Mycobacterium vanbaalenii PYR-1 4643371 YP_951160.1 CDS Mvan_0305 NC_008726.1 339126 339560 D hypothetical protein 339126..339560 Mycobacterium vanbaalenii PYR-1 4643372 YP_951161.1 CDS Mvan_0306 NC_008726.1 339596 340558 D PFAM: Integrase, catalytic region; KEGG: cgb:cg1716 transposase; integrase catalytic subunit 339596..340558 Mycobacterium vanbaalenii PYR-1 4643373 YP_951162.1 CDS Mvan_0307 NC_008726.1 340595 341287 R TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: mmc:Mmcs_0269 protein of unknown function DUF165; hypothetical protein complement(340595..341287) Mycobacterium vanbaalenii PYR-1 4643374 YP_951163.1 CDS Mvan_0308 NC_008726.1 341300 342250 R PFAM: periplasmic binding protein; KEGG: mmc:Mmcs_0270 twin-arginine translocation pathway signal; periplasmic binding protein complement(341300..342250) Mycobacterium vanbaalenii PYR-1 4643375 YP_951164.1 CDS Mvan_0309 NC_008726.1 342270 342779 R KEGG: mmc:Mmcs_2722 hypothetical protein; hypothetical protein complement(342270..342779) Mycobacterium vanbaalenii PYR-1 4643376 YP_951165.1 CDS Mvan_0310 NC_008726.1 342840 343448 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mmc:Mmcs_0272 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(342840..343448) Mycobacterium vanbaalenii PYR-1 4643377 YP_951166.1 CDS Mvan_0312 NC_008726.1 343879 346965 R PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4841 MmpL; MMPL domain-containing protein complement(343879..346965) Mycobacterium vanbaalenii PYR-1 4643379 YP_951167.1 CDS Mvan_0313 NC_008726.1 347239 347880 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3200 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(347239..347880) Mycobacterium vanbaalenii PYR-1 4643380 YP_951168.1 CDS Mvan_0314 NC_008726.1 347985 348854 D KEGG: mmc:Mmcs_3199 metal-dependent hydrolase; metal-dependent hydrolase 347985..348854 Mycobacterium vanbaalenii PYR-1 4643381 YP_951169.1 CDS Mvan_0315 NC_008726.1 348983 349885 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3221 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(348983..349885) Mycobacterium vanbaalenii PYR-1 4643382 YP_951170.1 CDS Mvan_0316 NC_008726.1 349944 350396 R TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_3222 phenylacetic acid degradation-related protein; hypothetical protein complement(349944..350396) Mycobacterium vanbaalenii PYR-1 4643383 YP_951171.1 CDS Mvan_0317 NC_008726.1 350569 351765 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_4580 cytochrome P450; cytochrome P450 complement(350569..351765) Mycobacterium vanbaalenii PYR-1 4645619 YP_951172.1 CDS Mvan_0318 NC_008726.1 351839 352435 D PFAM: regulatory protein, TetR; KEGG: bpm:BURPS1710b_A0472 putative TetR family transcriptional regulator; TetR family transcriptional regulator 351839..352435 Mycobacterium vanbaalenii PYR-1 4645620 YP_951173.1 CDS Mvan_0319 NC_008726.1 352432 353481 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein; luciferase family protein 352432..353481 Mycobacterium vanbaalenii PYR-1 4645621 YP_951174.1 CDS Mvan_0320 NC_008726.1 353530 354015 R KEGG: mmc:Mmcs_4840 hypothetical protein; hypothetical protein complement(353530..354015) Mycobacterium vanbaalenii PYR-1 4645622 YP_951175.1 CDS Mvan_0321 NC_008726.1 354073 354744 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4839 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(354073..354744) Mycobacterium vanbaalenii PYR-1 4645623 YP_951176.1 CDS Mvan_0322 NC_008726.1 354741 355253 R PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_4838 thioesterase superfamily; thioesterase superfamily protein complement(354741..355253) Mycobacterium vanbaalenii PYR-1 4645624 YP_951177.1 CDS Mvan_0323 NC_008726.1 355357 356040 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4837 transcriptional regulator, TetR family; TetR family transcriptional regulator 355357..356040 Mycobacterium vanbaalenii PYR-1 4645625 YP_951178.1 CDS Mvan_0324 NC_008726.1 356476 357384 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bha:BH2806 carboxylesterase; alpha/beta hydrolase domain-containing protein complement(356476..357384) Mycobacterium vanbaalenii PYR-1 4645626 YP_951179.1 CDS Mvan_0325 NC_008726.1 357642 358457 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO0511 dehydrogenase (secreted protein); short-chain dehydrogenase/reductase SDR complement(357642..358457) Mycobacterium vanbaalenii PYR-1 4645627 YP_951180.1 CDS Mvan_0326 NC_008726.1 358469 359479 R PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20216 putative epoxide hydrolase protein; alpha/beta hydrolase fold protein complement(358469..359479) Mycobacterium vanbaalenii PYR-1 4645628 YP_951181.1 CDS Mvan_0327 NC_008726.1 359476 361044 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpc:RPC_2481 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(359476..361044) Mycobacterium vanbaalenii PYR-1 4645629 YP_951182.1 CDS Mvan_0328 NC_008726.1 361122 362021 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sma:SAV7235 LysR-family transcriptional regulator; LysR family transcriptional regulator 361122..362021 Mycobacterium vanbaalenii PYR-1 4645630 YP_951183.1 CDS Mvan_0329 NC_008726.1 362247 363386 R KEGG: syn:sll1830 hypothetical protein; hypothetical protein complement(362247..363386) Mycobacterium vanbaalenii PYR-1 4645631 YP_951184.1 CDS Mvan_0330 NC_008726.1 363626 363964 R KEGG: mmc:Mmcs_5099 hypothetical protein; hypothetical protein complement(363626..363964) Mycobacterium vanbaalenii PYR-1 4645632 YP_951185.1 CDS Mvan_0331 NC_008726.1 364252 365229 D PFAM: Integral membrane protein TerC; KEGG: mmc:Mmcs_5098 integral membrane protein TerC; integral membrane protein TerC 364252..365229 Mycobacterium vanbaalenii PYR-1 4645633 YP_951186.1 CDS Mvan_0332 NC_008726.1 365319 365759 D hypothetical protein 365319..365759 Mycobacterium vanbaalenii PYR-1 4645634 YP_951187.1 CDS Mvan_0333 NC_008726.1 365868 366140 D hypothetical protein 365868..366140 Mycobacterium vanbaalenii PYR-1 4645635 YP_951188.1 CDS Mvan_0334 NC_008726.1 366211 366615 D PFAM: protein of unknown function DUF1469; KEGG: mmc:Mmcs_2236 protein of unknown function DUF1469; hypothetical protein 366211..366615 Mycobacterium vanbaalenii PYR-1 4645636 YP_951189.1 CDS Mvan_0335 NC_008726.1 366599 366862 D KEGG: mmc:Mmcs_2235 hypothetical protein; hypothetical protein 366599..366862 Mycobacterium vanbaalenii PYR-1 4645637 YP_951190.1 CDS Mvan_0336 NC_008726.1 367163 368116 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_4344 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 367163..368116 Mycobacterium vanbaalenii PYR-1 4645638 YP_951191.1 CDS Mvan_0337 NC_008726.1 368144 368953 D KEGG: mmc:Mmcs_5028 hypothetical protein; hypothetical protein 368144..368953 Mycobacterium vanbaalenii PYR-1 4645639 YP_951192.1 CDS Mvan_0338 NC_008726.1 369067 370044 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_1789 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 369067..370044 Mycobacterium vanbaalenii PYR-1 4645640 YP_951193.1 CDS Mvan_0339 NC_008726.1 370035 370370 R PFAM: small multidrug resistance protein; KEGG: mbo:Mb3092 multidrugs-transport integral membrane protein Mmr; small multidrug resistance protein complement(370035..370370) Mycobacterium vanbaalenii PYR-1 4645641 YP_951194.1 CDS Mvan_0340 NC_008726.1 370372 371136 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1593 putative enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(370372..371136) Mycobacterium vanbaalenii PYR-1 4645642 YP_951195.1 CDS Mvan_0341 NC_008726.1 371152 372288 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: fal:FRAAL1666 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(371152..372288) Mycobacterium vanbaalenii PYR-1 4645643 YP_951196.1 CDS Mvan_0342 NC_008726.1 372288 374051 R PFAM: protein of unknown function DUF1446; KEGG: mmc:Mmcs_3206 protein of unknown function DUF1446; hypothetical protein complement(372288..374051) Mycobacterium vanbaalenii PYR-1 4645220 YP_951197.1 CDS Mvan_0343 NC_008726.1 374048 374842 R KEGG: mmc:Mmcs_3207 hypothetical protein; hypothetical protein complement(374048..374842) Mycobacterium vanbaalenii PYR-1 4645221 YP_951198.1 CDS Mvan_0344 NC_008726.1 374846 375604 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3208 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(374846..375604) Mycobacterium vanbaalenii PYR-1 4645222 YP_951199.1 CDS Mvan_0345 NC_008726.1 375601 377598 R PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_3202 carbamoyl-phosphate synthase L chain, ATP-binding protein; carbamoyl-phosphate synthase ATP-binding subunit L complement(375601..377598) Mycobacterium vanbaalenii PYR-1 4645223 YP_951200.1 CDS Mvan_0346 NC_008726.1 377609 379207 R PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3201 carboxyl transferase; carboxyl transferase complement(377609..379207) Mycobacterium vanbaalenii PYR-1 4645224 YP_951201.1 CDS Mvan_0347 NC_008726.1 379370 380311 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bur:Bcep18194_C6742 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(379370..380311) Mycobacterium vanbaalenii PYR-1 4645225 YP_951202.1 CDS Mvan_0348 NC_008726.1 380532 381557 D PFAM: regulatory protein, LuxR; GAF domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mag:amb1255 response regulator; putative GAF sensor protein 380532..381557 Mycobacterium vanbaalenii PYR-1 4645226 YP_951203.1 CDS Mvan_0349 NC_008726.1 381554 382732 D PFAM: regulatory protein, LuxR; KEGG: gvi:glr4404 two-component response regulator; response regulator receiver protein 381554..382732 Mycobacterium vanbaalenii PYR-1 4645227 YP_951204.1 CDS Mvan_0350 NC_008726.1 382739 383248 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: nfa:nfa3820 putative flavin-dependent oxidoreductase; flavin reductase domain-containing protein complement(382739..383248) Mycobacterium vanbaalenii PYR-1 4645228 YP_951205.1 CDS Mvan_0351 NC_008726.1 383245 383718 R KEGG: rha:RHA1_ro04391 hypothetical protein; hypothetical protein complement(383245..383718) Mycobacterium vanbaalenii PYR-1 4645229 YP_951206.1 CDS Mvan_0352 NC_008726.1 383735 385234 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4650 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase complement(383735..385234) Mycobacterium vanbaalenii PYR-1 4645230 YP_951207.1 CDS Mvan_0353 NC_008726.1 385249 386853 R PFAM: AMP-dependent synthetase and ligase; KEGG: bcn:Bcen_5034 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(385249..386853) Mycobacterium vanbaalenii PYR-1 4645231 YP_951208.1 CDS Mvan_0354 NC_008726.1 386869 387381 R hypothetical protein complement(386869..387381) Mycobacterium vanbaalenii PYR-1 4645232 YP_951209.1 CDS Mvan_0355 NC_008726.1 387396 387848 R PFAM: protein of unknown function DUF1486; hypothetical protein complement(387396..387848) Mycobacterium vanbaalenii PYR-1 4645233 YP_951210.1 CDS Mvan_0356 NC_008726.1 388050 389348 D PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bha:BH2178 short-chain-specific acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 388050..389348 Mycobacterium vanbaalenii PYR-1 4645234 YP_951211.1 CDS Mvan_0357 NC_008726.1 389456 389788 D PFAM: Limonene-1,2-epoxide hydrolase; limonene-1,2-epoxide hydrolase 389456..389788 Mycobacterium vanbaalenii PYR-1 4645235 YP_951212.1 CDS Mvan_0358 NC_008726.1 389785 390831 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_1795 putative oxidoreductase; luciferase family protein complement(389785..390831) Mycobacterium vanbaalenii PYR-1 4645236 YP_951213.1 CDS Mvan_0359 NC_008726.1 390980 391816 D hypothetical protein 390980..391816 Mycobacterium vanbaalenii PYR-1 4645237 YP_951214.1 CDS Mvan_0360 NC_008726.1 391813 392394 R PFAM: regulatory protein, TetR; KEGG: tfu:Tfu_0949 putative TetR-family transcriptional regulator; TetR family transcriptional regulator complement(391813..392394) Mycobacterium vanbaalenii PYR-1 4645238 YP_951215.1 CDS Mvan_0361 NC_008726.1 393026 393796 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140; hypothetical protein 393026..393796 Mycobacterium vanbaalenii PYR-1 4645239 YP_951216.1 CDS Mvan_0362 NC_008726.1 393807 394661 D PFAM: protein of unknown function DUF140; KEGG: mtc:MT2017 conserved hypothetical protein; hypothetical protein 393807..394661 Mycobacterium vanbaalenii PYR-1 4645240 YP_951217.1 CDS Mvan_0363 NC_008726.1 394665 396029 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2018 virulence factor; virulence factor Mce family protein 394665..396029 Mycobacterium vanbaalenii PYR-1 4645241 YP_951218.1 CDS Mvan_0364 NC_008726.1 396026 397054 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2019 virulence factor mce family protein; virulence factor Mce family protein 396026..397054 Mycobacterium vanbaalenii PYR-1 4645242 YP_951219.1 CDS Mvan_0365 NC_008726.1 397051 398364 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2020 virulence factor mce family protein; virulence factor Mce family protein 397051..398364 Mycobacterium vanbaalenii PYR-1 4645243 YP_951220.1 CDS Mvan_0366 NC_008726.1 398361 399680 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2021 virulence factor mce family protein; virulence factor Mce family protein 398361..399680 Mycobacterium vanbaalenii PYR-1 4645919 YP_951221.1 CDS Mvan_0367 NC_008726.1 399677 400813 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2022 virulence factor mce family protein; virulence factor Mce family protein 399677..400813 Mycobacterium vanbaalenii PYR-1 4645920 YP_951222.1 CDS Mvan_0368 NC_008726.1 400814 402259 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry; virulence factor Mce family protein 400814..402259 Mycobacterium vanbaalenii PYR-1 4645921 YP_951223.1 CDS Mvan_0369 NC_008726.1 402299 402871 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3223 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(402299..402871) Mycobacterium vanbaalenii PYR-1 4645922 YP_951224.1 CDS Mvan_0370 NC_008726.1 403066 404802 D KEGG: afm:Afu4g13630 hypothetical protein; hypothetical protein 403066..404802 Mycobacterium vanbaalenii PYR-1 4645923 YP_951225.1 CDS Mvan_0371 NC_008726.1 404897 405631 D PFAM: cutinase; KEGG: mmc:Mmcs_5300 cutinase; cutinase 404897..405631 Mycobacterium vanbaalenii PYR-1 4645924 YP_951226.1 CDS Mvan_0372 NC_008726.1 405612 406247 R PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: mmc:Mmcs_1486 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(405612..406247) Mycobacterium vanbaalenii PYR-1 4645925 YP_951227.1 CDS Mvan_0373 NC_008726.1 406240 407469 R PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein; cytochrome P450 complement(406240..407469) Mycobacterium vanbaalenii PYR-1 4645926 YP_951228.1 CDS Mvan_0374 NC_008726.1 407600 408571 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpa:MAP1683c hypothetical protein; diguanylate cyclase complement(407600..408571) Mycobacterium vanbaalenii PYR-1 4645927 YP_951229.1 CDS Mvan_0375 NC_008726.1 408663 409532 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 408663..409532 Mycobacterium vanbaalenii PYR-1 4645928 YP_951230.1 CDS Mvan_0376 NC_008726.1 409557 410321 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 409557..410321 Mycobacterium vanbaalenii PYR-1 4645929 YP_951231.1 CDS Mvan_0377 NC_008726.1 410318 411790 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 410318..411790 Mycobacterium vanbaalenii PYR-1 4645930 YP_951232.1 CDS Mvan_0378 NC_008726.1 411790 412527 D KEGG: tfu:Tfu_0310 precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 411790..412527 Mycobacterium vanbaalenii PYR-1 4645931 YP_951233.1 CDS Mvan_0379 NC_008726.1 412524 413051 D PFAM: cobalbumin biosynthesis enzyme; KEGG: mbo:Mb0260c putative bifunctional cobalamin biosynthesis protein CobU: cobinamide kinase + cobinamide phosphate guanylyltransferase; cobalbumin biosynthesis protein 412524..413051 Mycobacterium vanbaalenii PYR-1 4645932 YP_951234.1 CDS Mvan_0380 NC_008726.1 413061 413510 R KEGG: sco:SCO2460 hypothetical protein; hypothetical protein complement(413061..413510) Mycobacterium vanbaalenii PYR-1 4645933 YP_951235.1 CDS Mvan_0381 NC_008726.1 413511 414152 R TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: fra:Francci3_2878 Cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase complement(413511..414152) Mycobacterium vanbaalenii PYR-1 4645934 YP_951236.1 CDS Mvan_0382 NC_008726.1 414149 414922 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: nfa:nfa50340 putative methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(414149..414922) Mycobacterium vanbaalenii PYR-1 4645935 YP_951237.1 CDS Mvan_0383 NC_008726.1 414958 416199 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2; amidohydrolase 2 complement(414958..416199) Mycobacterium vanbaalenii PYR-1 4645936 YP_951238.1 CDS Mvan_0384 NC_008726.1 416276 416851 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(416276..416851) Mycobacterium vanbaalenii PYR-1 4645937 YP_951239.1 CDS Mvan_0385 NC_008726.1 416848 417912 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro01362 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator complement(416848..417912) Mycobacterium vanbaalenii PYR-1 4645938 YP_951240.1 CDS Mvan_0386 NC_008726.1 418154 419074 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sma:SAV5337 putative IolE protein; xylose isomerase domain-containing protein 418154..419074 Mycobacterium vanbaalenii PYR-1 4645939 YP_951241.1 CDS Mvan_0387 NC_008726.1 419087 420118 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sma:SAV1234 putative myo-inositol dehydrogenase; inositol 2-dehydrogenase 419087..420118 Mycobacterium vanbaalenii PYR-1 4645940 YP_951242.1 CDS Mvan_0388 NC_008726.1 420123 420995 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rha:RHA1_ro01356 possible myo-inositol catabolism protein; xylose isomerase domain-containing protein 420123..420995 Mycobacterium vanbaalenii PYR-1 4645941 YP_951243.1 CDS Mvan_0389 NC_008726.1 421104 421748 D KEGG: mpa:MAP3331 hypothetical protein; hypothetical protein 421104..421748 Mycobacterium vanbaalenii PYR-1 4645942 YP_951244.1 CDS Mvan_0390 NC_008726.1 421745 422011 R PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa31330 putative DNA-binding protein; helix-turn-helix domain-containing protein complement(421745..422011) Mycobacterium vanbaalenii PYR-1 4645943 YP_951245.1 CDS Mvan_0391 NC_008726.1 422107 422895 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rha:RHA1_ro01746 methionyl aminopeptidase; methionine aminopeptidase 422107..422895 Mycobacterium vanbaalenii PYR-1 4645869 YP_951246.1 CDS Mvan_0392 NC_008726.1 422904 424316 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: mmc:Mmcs_0353 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(422904..424316) Mycobacterium vanbaalenii PYR-1 4645870 YP_951247.1 CDS Mvan_0393 NC_008726.1 424580 425752 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5189 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(424580..425752) Mycobacterium vanbaalenii PYR-1 4645871 YP_951248.1 CDS Mvan_0394 NC_008726.1 425877 427073 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5188 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(425877..427073) Mycobacterium vanbaalenii PYR-1 4645872 YP_951249.1 CDS Mvan_0395 NC_008726.1 427234 427641 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_0359 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(427234..427641) Mycobacterium vanbaalenii PYR-1 4645873 YP_951250.1 CDS Mvan_0396 NC_008726.1 427789 429027 R KEGG: mmc:Mmcs_0360 hypothetical protein; hypothetical protein complement(427789..429027) Mycobacterium vanbaalenii PYR-1 4645874 YP_951251.1 CDS Mvan_0397 NC_008726.1 429083 430777 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 429083..430777 Mycobacterium vanbaalenii PYR-1 4645875 YP_951252.1 CDS Mvan_0398 NC_008726.1 430878 431657 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV1036 dehydrogenase; short-chain dehydrogenase/reductase SDR 430878..431657 Mycobacterium vanbaalenii PYR-1 4645876 YP_951253.1 CDS Mvan_0399 NC_008726.1 432037 432252 D KEGG: mxa:MXAN_4126 ferredoxin reductase; ferredoxin reductase 432037..432252 Mycobacterium vanbaalenii PYR-1 4645877 YP_951254.1 CDS Mvan_0400 NC_008726.1 432249 433643 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mxa:MXAN_4126 ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 432249..433643 Mycobacterium vanbaalenii PYR-1 4645878 YP_951255.1 CDS Mvan_0401 NC_008726.1 433660 434925 D PFAM: cytochrome P450; KEGG: mba:Mbar_A1945 putative cytochrome P450; cytochrome P450 433660..434925 Mycobacterium vanbaalenii PYR-1 4645879 YP_951256.1 CDS Mvan_0402 NC_008726.1 434952 435272 R KEGG: mmc:Mmcs_0362 hypothetical protein; hypothetical protein complement(434952..435272) Mycobacterium vanbaalenii PYR-1 4645880 YP_951257.1 CDS Mvan_0403 NC_008726.1 435313 437526 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0366 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(435313..437526) Mycobacterium vanbaalenii PYR-1 4645881 YP_951258.1 CDS Mvan_0404 NC_008726.1 437584 438540 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: sco:SCO3478 dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(437584..438540) Mycobacterium vanbaalenii PYR-1 4645882 YP_951259.1 CDS Mvan_0405 NC_008726.1 438537 439673 R KEGG: mpa:MAP3717c hypothetical protein; hypothetical protein complement(438537..439673) Mycobacterium vanbaalenii PYR-1 4645883 YP_951260.1 CDS Mvan_0406 NC_008726.1 439670 440308 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP3718c hypothetical protein; TetR family transcriptional regulator complement(439670..440308) Mycobacterium vanbaalenii PYR-1 4645884 YP_951261.1 CDS Mvan_0407 NC_008726.1 440507 441769 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_0130 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein complement(440507..441769) Mycobacterium vanbaalenii PYR-1 4645885 YP_951262.1 CDS Mvan_0408 NC_008726.1 442062 442637 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb0280 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 442062..442637 Mycobacterium vanbaalenii PYR-1 4645886 YP_951263.1 CDS Mvan_0409 NC_008726.1 442634 443131 R KEGG: mpa:MAP3723c FadD27; FadD27 complement(442634..443131) Mycobacterium vanbaalenii PYR-1 4645887 YP_951264.1 CDS Mvan_0410 NC_008726.1 443348 444256 D KEGG: mmc:Mmcs_0368 hypothetical protein; hypothetical protein 443348..444256 Mycobacterium vanbaalenii PYR-1 4645888 YP_951265.1 CDS Mvan_0411 NC_008726.1 444412 446259 D PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_0370 AAA ATPase, central region; ATPase central domain-containing protein 444412..446259 Mycobacterium vanbaalenii PYR-1 4645889 YP_951266.1 CDS Mvan_0412 NC_008726.1 446256 447788 D PFAM: protein of unknown function DUF690; KEGG: mmc:Mmcs_0371 protein of unknown function DUF690; hypothetical protein 446256..447788 Mycobacterium vanbaalenii PYR-1 4645890 YP_951267.1 CDS Mvan_0413 NC_008726.1 447785 451780 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mmc:Mmcs_0372 cell division FtsK/SpoIIIE; cell division protein FtsK 447785..451780 Mycobacterium vanbaalenii PYR-1 4645891 YP_951268.1 CDS Mvan_0414 NC_008726.1 451780 452088 D PFAM: PE domain protein; KEGG: mmc:Mmcs_0373 PE-like protein; PE domain-containing protein 451780..452088 Mycobacterium vanbaalenii PYR-1 4645892 YP_951269.1 CDS Mvan_0415 NC_008726.1 452093 453667 D PFAM: PPE protein; KEGG: mmc:Mmcs_0374 PPE protein; PPE protein 452093..453667 Mycobacterium vanbaalenii PYR-1 4645893 YP_951270.1 CDS Mvan_0416 NC_008726.1 453673 454878 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mmc:Mmcs_4926 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein complement(453673..454878) Mycobacterium vanbaalenii PYR-1 4647791 YP_951271.1 CDS Mvan_0417 NC_008726.1 455125 455418 D KEGG: mmc:Mmcs_0376 hypothetical protein; hypothetical protein 455125..455418 Mycobacterium vanbaalenii PYR-1 4647792 YP_951272.1 CDS Mvan_0418 NC_008726.1 455451 455738 D KEGG: mmc:Mmcs_0377 hypothetical protein; hypothetical protein 455451..455738 Mycobacterium vanbaalenii PYR-1 4647793 YP_951273.1 CDS Mvan_0419 NC_008726.1 455748 456608 D KEGG: mmc:Mmcs_0378 putative DNA-binding protein; putative DNA-binding protein 455748..456608 Mycobacterium vanbaalenii PYR-1 4647794 YP_951274.1 CDS Mvan_0420 NC_008726.1 456596 458053 D PFAM: protein of unknown function DUF571; KEGG: mmc:Mmcs_0379 protein of unknown function DUF571; hypothetical protein 456596..458053 Mycobacterium vanbaalenii PYR-1 4647795 YP_951275.1 CDS Mvan_0421 NC_008726.1 458056 459417 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_0380 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 458056..459417 Mycobacterium vanbaalenii PYR-1 4647796 YP_951276.1 CDS Mvan_0422 NC_008726.1 459414 460301 D KEGG: mmc:Mmcs_0381 putative conserved transmembrane protein; putative transmembrane protein 459414..460301 Mycobacterium vanbaalenii PYR-1 4647797 YP_951277.1 CDS Mvan_0423 NC_008726.1 460288 461481 R KEGG: mmc:Mmcs_0385 hypothetical protein; hypothetical protein complement(460288..461481) Mycobacterium vanbaalenii PYR-1 4647798 YP_951278.1 CDS Mvan_0424 NC_008726.1 461478 462413 R PFAM: amidohydrolase 2; KEGG: nfa:nfa25480 putative amidohydrolase; amidohydrolase 2 complement(461478..462413) Mycobacterium vanbaalenii PYR-1 4647799 YP_951279.1 CDS Mvan_0425 NC_008726.1 462458 463222 D catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 462458..463222 Mycobacterium vanbaalenii PYR-1 4647800 YP_951280.1 CDS Mvan_0426 NC_008726.1 463361 464980 D PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2855 protein of unknown function DUF222; hypothetical protein 463361..464980 Mycobacterium vanbaalenii PYR-1 4647801 YP_951281.1 CDS Mvan_0427 NC_008726.1 464964 465917 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: fra:Francci3_2527 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 464964..465917 Mycobacterium vanbaalenii PYR-1 4647802 YP_951282.1 CDS Mvan_0428 NC_008726.1 465905 466387 R KEGG: mpa:MAP3794c hypothetical protein; hypothetical protein complement(465905..466387) Mycobacterium vanbaalenii PYR-1 4647803 YP_951283.1 CDS Mvan_0429 NC_008726.1 466437 467102 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: mmc:Mmcs_0393 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 466437..467102 Mycobacterium vanbaalenii PYR-1 4647804 YP_951284.1 CDS Mvan_0430 NC_008726.1 467056 468549 R PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase, catalytic region; KEGG: mmc:Mmcs_0394 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(467056..468549) Mycobacterium vanbaalenii PYR-1 4647805 YP_951285.1 CDS Mvan_0431 NC_008726.1 468602 469294 D KEGG: mmc:Mmcs_0397 putative conserved exported protein; hypothetical protein 468602..469294 Mycobacterium vanbaalenii PYR-1 4647806 YP_951286.1 CDS Mvan_0432 NC_008726.1 469298 469777 R KEGG: mmc:Mmcs_0398 hypothetical protein; hypothetical protein complement(469298..469777) Mycobacterium vanbaalenii PYR-1 4647807 YP_951287.1 CDS Mvan_0433 NC_008726.1 469829 471577 D KEGG: mmc:Mmcs_0401 conserved hypothetical proline and threonine rich protein; hypothetical protein 469829..471577 Mycobacterium vanbaalenii PYR-1 4647808 YP_951288.1 CDS Mvan_0434 NC_008726.1 471723 472709 R KEGG: rxy:Rxyl_3024 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(471723..472709) Mycobacterium vanbaalenii PYR-1 4647809 YP_951289.1 CDS Mvan_0435 NC_008726.1 472706 473698 R KEGG: rxy:Rxyl_3025 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(472706..473698) Mycobacterium vanbaalenii PYR-1 4647810 YP_951290.1 CDS Mvan_0436 NC_008726.1 473695 474657 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2176 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(473695..474657) Mycobacterium vanbaalenii PYR-1 4647811 YP_951291.1 CDS Mvan_0437 NC_008726.1 474657 475685 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0598 permease of oligopeptide ABC transporter; binding-protein-dependent transport system inner membrane protein complement(474657..475685) Mycobacterium vanbaalenii PYR-1 4647812 YP_951292.1 CDS Mvan_0438 NC_008726.1 475685 477334 R PFAM: extracellular solute-binding protein, family 5; KEGG: rru:Rru_A2178 extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(475685..477334) Mycobacterium vanbaalenii PYR-1 4647813 YP_951293.1 CDS Mvan_0439 NC_008726.1 477528 478514 D TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: mmc:Mmcs_0382 lactate/malate dehydrogenase; L-lactate dehydrogenase 477528..478514 Mycobacterium vanbaalenii PYR-1 4647814 YP_951294.1 CDS Mvan_0440 NC_008726.1 478503 479246 R hypothetical protein complement(478503..479246) Mycobacterium vanbaalenii PYR-1 4647815 YP_951295.1 CDS Mvan_0441 NC_008726.1 479256 480041 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa54300 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(479256..480041) Mycobacterium vanbaalenii PYR-1 4648236 YP_951296.1 CDS Mvan_0442 NC_008726.1 480051 481328 R PFAM: monooxygenase, FAD-binding; KEGG: mtc:MT1794 hypothetical protein; hypothetical protein complement(480051..481328) Mycobacterium vanbaalenii PYR-1 4648237 YP_951297.1 CDS Mvan_0443 NC_008726.1 481487 484063 D PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: aba:Acid345_0379 iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 481487..484063 Mycobacterium vanbaalenii PYR-1 4648238 YP_951298.1 CDS Mvan_0444 NC_008726.1 484063 485472 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_4258 protein of unknown function UPF0089; hypothetical protein 484063..485472 Mycobacterium vanbaalenii PYR-1 4648239 YP_951299.1 CDS Mvan_0445 NC_008726.1 485463 487352 R PFAM: Lipocalin family protein; KEGG: ccr:CC3478 outer membrane lipoprotein Blc; Lipocalin family protein complement(485463..487352) Mycobacterium vanbaalenii PYR-1 4648240 YP_951300.1 CDS Mvan_0446 NC_008726.1 487428 488291 R PFAM: glycoside hydrolase, family 16; KEGG: mmc:Mmcs_0416 twin-arginine translocation pathway signal; glycoside hydrolase family protein complement(487428..488291) Mycobacterium vanbaalenii PYR-1 4648241 YP_951301.1 CDS Mvan_0447 NC_008726.1 488373 490145 R KEGG: mmc:Mmcs_5335 hypothetical protein; hypothetical protein complement(488373..490145) Mycobacterium vanbaalenii PYR-1 4648242 YP_951302.1 CDS Mvan_0448 NC_008726.1 490327 490887 D hypothetical protein 490327..490887 Mycobacterium vanbaalenii PYR-1 4648243 YP_951303.1 CDS Mvan_0449 NC_008726.1 491039 491533 D KEGG: mmc:Mmcs_0421 hypothetical protein; hypothetical protein 491039..491533 Mycobacterium vanbaalenii PYR-1 4648244 YP_951304.1 CDS Mvan_0450 NC_008726.1 491530 492072 R PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: mpa:MAP1057c hypothetical protein; XRE family transcriptional regulator complement(491530..492072) Mycobacterium vanbaalenii PYR-1 4648245 YP_951305.1 CDS Mvan_0451 NC_008726.1 492162 492947 D PFAM: class II aldolase/adducin family protein; KEGG: mpa:MAP1058 hypothetical protein; class II aldolase/adducin domain-containing protein 492162..492947 Mycobacterium vanbaalenii PYR-1 4648246 YP_951306.1 CDS Mvan_0452 NC_008726.1 492975 493865 D PFAM: dihydrodipicolinate synthetase; KEGG: mpa:MAP1059 probable dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 492975..493865 Mycobacterium vanbaalenii PYR-1 4648247 YP_951307.1 CDS Mvan_0453 NC_008726.1 494420 494668 D KEGG: mmc:Mmcs_0845 transposase IS3/IS911; transposase IS3/IS911 494420..494668 Mycobacterium vanbaalenii PYR-1 4648249 YP_951308.1 CDS Mvan_0454 NC_008726.1 494769 495830 D PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase; transposase, mutator type 494769..495830 Mycobacterium vanbaalenii PYR-1 4648250 YP_951309.1 CDS Mvan_0455 NC_008726.1 495898 496947 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sha:SH1662 hypothetical protein; phage integrase family protein 495898..496947 Mycobacterium vanbaalenii PYR-1 4648251 YP_951310.1 CDS Mvan_0456 NC_008726.1 496944 498887 D PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein 496944..498887 Mycobacterium vanbaalenii PYR-1 4648252 YP_951311.1 CDS Mvan_0458 NC_008726.1 499316 500332 D PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; KEGG: sco:SCO0096 noncomposite transposon transposase; integrase catalytic subunit 499316..500332 Mycobacterium vanbaalenii PYR-1 4648254 YP_951312.1 CDS Mvan_0459 NC_008726.1 500389 502026 D PFAM: transposase, IS4 family protein; KEGG: cdi:DIP0047 putative transposase (pseudogene); transposase, IS4 family protein 500389..502026 Mycobacterium vanbaalenii PYR-1 4648255 YP_951313.1 CDS Mvan_0460 NC_008726.1 502131 503012 D KEGG: sco:SCO0095 hypothetical protein; hypothetical protein 502131..503012 Mycobacterium vanbaalenii PYR-1 4648256 YP_951314.1 CDS Mvan_0461 NC_008726.1 503440 503943 R KEGG: mmc:Mmcs_1620 hypothetical protein; hypothetical protein complement(503440..503943) Mycobacterium vanbaalenii PYR-1 4648257 YP_951315.1 CDS Mvan_0462 NC_008726.1 503943 504749 R PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_1621 transcriptional regulator, IclR family; regulatory proteins IclR complement(503943..504749) Mycobacterium vanbaalenii PYR-1 4648258 YP_951316.1 CDS Mvan_0463 NC_008726.1 505224 506678 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1622 ring hydroxylating dioxygenase, alpha subunit; ring hydroxylating dioxygenase subunit alpha 505224..506678 Mycobacterium vanbaalenii PYR-1 4648259 YP_951317.1 CDS Mvan_0464 NC_008726.1 506675 507271 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1623 aromatic-ring-hydroxylating dioxygenase, beta subunit; 3-phenylpropionate dioxygenase subunit beta 506675..507271 Mycobacterium vanbaalenii PYR-1 4645570 YP_951318.1 CDS Mvan_0465 NC_008726.1 507268 507573 D KEGG: mmc:Mmcs_1691 hypothetical protein; hypothetical protein 507268..507573 Mycobacterium vanbaalenii PYR-1 4645571 YP_951319.1 CDS Mvan_0466 NC_008726.1 507570 508373 D Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 507570..508373 Mycobacterium vanbaalenii PYR-1 4645572 YP_951320.1 CDS Mvan_0467 NC_008726.1 508434 509840 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_1625 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 508434..509840 Mycobacterium vanbaalenii PYR-1 4645573 YP_951321.1 CDS Mvan_0468 NC_008726.1 510393 511478 D PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_1628 cupin 2, conserved barrel; cupin 510393..511478 Mycobacterium vanbaalenii PYR-1 4645574 YP_951322.1 CDS Mvan_0469 NC_008726.1 511503 512501 D PFAM: dihydrodipicolinate synthetase; KEGG: mmc:Mmcs_1629 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 511503..512501 Mycobacterium vanbaalenii PYR-1 4645575 YP_951323.1 CDS Mvan_0470 NC_008726.1 512520 513410 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 512520..513410 Mycobacterium vanbaalenii PYR-1 4645576 YP_951324.1 CDS Mvan_0471 NC_008726.1 513456 513842 D KEGG: mmc:Mmcs_1631 hypothetical protein; hypothetical protein 513456..513842 Mycobacterium vanbaalenii PYR-1 4645577 YP_951325.1 CDS Mvan_0472 NC_008726.1 514011 515036 D PFAM: dihydrodipicolinate synthetase; KEGG: mmc:Mmcs_1632 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 514011..515036 Mycobacterium vanbaalenii PYR-1 4645578 YP_951326.1 CDS Mvan_0474 NC_008726.1 516204 517271 D PFAM: phage integrase family protein; KEGG: nfa:pnf2830 putative recombinase; phage integrase family protein 516204..517271 Mycobacterium vanbaalenii PYR-1 4645580 YP_951327.1 CDS Mvan_0475 NC_008726.1 517268 517582 D KEGG: mmc:Mmcs_2599 hypothetical protein; hypothetical protein 517268..517582 Mycobacterium vanbaalenii PYR-1 4645581 YP_951328.1 CDS Mvan_0476 NC_008726.1 517616 519250 D PFAM: phage integrase family protein; KEGG: rha:RHA1_ro08303 hypothetical protein; phage integrase family protein 517616..519250 Mycobacterium vanbaalenii PYR-1 4645582 YP_951329.1 CDS Mvan_0478 NC_008726.1 519727 520908 D PFAM: phage integrase family protein; KEGG: fra:Francci3_3734 phage integrase-like SAM-like; phage integrase family protein 519727..520908 Mycobacterium vanbaalenii PYR-1 4645584 YP_951330.1 CDS Mvan_0479 NC_008726.1 520905 523079 D PFAM: phage integrase family protein; KEGG: mmc:Mmcs_5578 phage integrase; phage integrase family protein 520905..523079 Mycobacterium vanbaalenii PYR-1 4645585 YP_951331.1 CDS Mvan_0480 NC_008726.1 523076 523519 D KEGG: Tn554-related, transposase C; Tn554-related, transposase C 523076..523519 Mycobacterium vanbaalenii PYR-1 4645586 YP_951332.1 CDS Mvan_0481 NC_008726.1 523499 523939 R KEGG: mbo:Mb2969 possible transposase; DNA replication protein-like complement(523499..523939) Mycobacterium vanbaalenii PYR-1 4645587 YP_951333.1 CDS Mvan_0482 NC_008726.1 523936 525195 R PFAM: Integrase, catalytic region; KEGG: mbo:Mb2968 IS1533 transposase; integrase catalytic subunit complement(523936..525195) Mycobacterium vanbaalenii PYR-1 4645588 YP_951334.1 CDS Mvan_0483 NC_008726.1 525485 525994 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 525485..525994 Mycobacterium vanbaalenii PYR-1 4645589 YP_951335.1 CDS Mvan_0484 NC_008726.1 526117 527889 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1635 fumarate reductase/succinate dehydrogenase flavoprotein-like protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 526117..527889 Mycobacterium vanbaalenii PYR-1 4645590 YP_951336.1 CDS Mvan_0485 NC_008726.1 527886 528176 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_1636 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin 527886..528176 Mycobacterium vanbaalenii PYR-1 4645591 YP_951337.1 CDS Mvan_0486 NC_008726.1 528372 529832 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1637 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 528372..529832 Mycobacterium vanbaalenii PYR-1 4645592 YP_951338.1 CDS Mvan_0487 NC_008726.1 530389 530898 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 530389..530898 Mycobacterium vanbaalenii PYR-1 4645593 YP_951339.1 CDS Mvan_0488 NC_008726.1 530959 532326 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1642 ring hydroxylating dioxygenase, alpha subunit; ring hydroxylating dioxygenase subunit alpha 530959..532326 Mycobacterium vanbaalenii PYR-1 4646748 YP_951340.1 CDS Mvan_0489 NC_008726.1 532346 533173 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1643 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 532346..533173 Mycobacterium vanbaalenii PYR-1 4646749 YP_951341.1 CDS Mvan_0490 NC_008726.1 533231 534256 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1644 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 533231..534256 Mycobacterium vanbaalenii PYR-1 4646750 YP_951342.1 CDS Mvan_0491 NC_008726.1 534271 535356 D KEGG: mmc:Mmcs_1645 hypothetical protein; hypothetical protein 534271..535356 Mycobacterium vanbaalenii PYR-1 4646751 YP_951343.1 CDS Mvan_0492 NC_008726.1 535353 536534 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1646 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 535353..536534 Mycobacterium vanbaalenii PYR-1 4646752 YP_951344.1 CDS Mvan_0493 NC_008726.1 536528 537025 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1647 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 536528..537025 Mycobacterium vanbaalenii PYR-1 4646753 YP_951345.1 CDS Mvan_0494 NC_008726.1 537054 537452 D PFAM: Sterol-binding domain protein; KEGG: mmc:Mmcs_1648 sterol-binding protein; sterol-binding domain-containing protein 537054..537452 Mycobacterium vanbaalenii PYR-1 4646754 YP_951346.1 CDS Mvan_0495 NC_008726.1 537455 537973 D PFAM: intradiol ring-cleavage dioxygenase; KEGG: mmc:Mmcs_1649 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 537455..537973 Mycobacterium vanbaalenii PYR-1 4646755 YP_951347.1 CDS Mvan_0496 NC_008726.1 538064 538618 R PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10114 possible transposase, C-terminal; transposase, IS4 family protein complement(538064..538618) Mycobacterium vanbaalenii PYR-1 4646756 YP_951348.1 CDS Mvan_0497 NC_008726.1 538566 538961 R KEGG: lxx:Lxx02410 transposase; transposase complement(538566..538961) Mycobacterium vanbaalenii PYR-1 4646757 YP_951349.1 CDS Mvan_0498 NC_008726.1 539073 539882 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1650 protein of unknown function DUF140; hypothetical protein 539073..539882 Mycobacterium vanbaalenii PYR-1 4646758 YP_951350.1 CDS Mvan_0499 NC_008726.1 539879 540736 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1523 protein of unknown function DUF140; hypothetical protein 539879..540736 Mycobacterium vanbaalenii PYR-1 4646759 YP_951351.1 CDS Mvan_0500 NC_008726.1 540742 542088 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1654 mammalian cell entry; virulence factor Mce family protein 540742..542088 Mycobacterium vanbaalenii PYR-1 4646760 YP_951352.1 CDS Mvan_0501 NC_008726.1 542146 542982 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1655 mammalian cell entry; virulence factor Mce family protein 542146..542982 Mycobacterium vanbaalenii PYR-1 4646761 YP_951353.1 CDS Mvan_0502 NC_008726.1 543322 543798 D KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein 543322..543798 Mycobacterium vanbaalenii PYR-1 4646762 YP_951354.1 CDS Mvan_0503 NC_008726.1 543872 544240 R hypothetical protein complement(543872..544240) Mycobacterium vanbaalenii PYR-1 4646763 YP_951355.1 CDS Mvan_0504 NC_008726.1 544279 544686 R PFAM: protein of unknown function DUF302; KEGG: mmc:Mmcs_4018 protein of unknown function DUF302; hypothetical protein complement(544279..544686) Mycobacterium vanbaalenii PYR-1 4646764 YP_951356.1 CDS Mvan_0505 NC_008726.1 544704 546686 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mbo:Mb2015c probable metal cation transporter P-type ATPase G CtpG; heavy metal translocating P-type ATPase complement(544704..546686) Mycobacterium vanbaalenii PYR-1 4646765 YP_951357.1 CDS Mvan_0506 NC_008726.1 546679 547116 R PFAM: regulatory protein, ArsR; KEGG: nfa:pnf1320 putative transcriptional regulator; regulatory protein ArsR complement(546679..547116) Mycobacterium vanbaalenii PYR-1 4646766 YP_951358.1 CDS Mvan_0507 NC_008726.1 547211 547474 D KEGG: nfa:pnf1300 hypothetical protein; hypothetical protein 547211..547474 Mycobacterium vanbaalenii PYR-1 4646043 YP_951359.1 CDS Mvan_0508 NC_008726.1 547480 548259 D KEGG: mlo:mlr6585 hypothetical protein; hypothetical protein 547480..548259 Mycobacterium vanbaalenii PYR-1 4646044 YP_951360.1 CDS Mvan_0509 NC_008726.1 548272 548679 D KEGG: sco:SCO3621 serine-threonine protein kinase; hypothetical protein 548272..548679 Mycobacterium vanbaalenii PYR-1 4646045 YP_951361.1 CDS Mvan_0510 NC_008726.1 549102 549824 D hypothetical protein 549102..549824 Mycobacterium vanbaalenii PYR-1 4646046 YP_951362.1 CDS Mvan_0511 NC_008726.1 549874 551118 D PFAM: protein of unknown function DUF955; KEGG: bbr:BB2493 putative phage-related DNA-binding protein; hypothetical protein 549874..551118 Mycobacterium vanbaalenii PYR-1 4646047 YP_951363.1 CDS Mvan_0512 NC_008726.1 551141 552340 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mmc:Mmcs_5577 phage integrase; phage integrase family protein 551141..552340 Mycobacterium vanbaalenii PYR-1 4646767 YP_951364.1 CDS Mvan_0513 NC_008726.1 552349 554574 D PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein 552349..554574 Mycobacterium vanbaalenii PYR-1 4646768 YP_951365.1 CDS Mvan_0515 NC_008726.1 555304 556632 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1656 mammalian cell entry; virulence factor Mce family protein 555304..556632 Mycobacterium vanbaalenii PYR-1 4646770 YP_951366.1 CDS Mvan_0516 NC_008726.1 556629 557975 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1657 mammalian cell entry; virulence factor Mce family protein 556629..557975 Mycobacterium vanbaalenii PYR-1 4646771 YP_951367.1 CDS Mvan_0517 NC_008726.1 557972 559111 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1658 mammalian cell entry; virulence factor Mce family protein 557972..559111 Mycobacterium vanbaalenii PYR-1 4646772 YP_951368.1 CDS Mvan_0518 NC_008726.1 559111 560565 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry; virulence factor Mce family protein 559111..560565 Mycobacterium vanbaalenii PYR-1 4644843 YP_951369.1 CDS Mvan_0519 NC_008726.1 560562 561227 D KEGG: mmc:Mmcs_1660 hypothetical protein; hypothetical protein 560562..561227 Mycobacterium vanbaalenii PYR-1 4644844 YP_951370.1 CDS Mvan_0520 NC_008726.1 561224 561883 D KEGG: mmc:Mmcs_1661 hypothetical protein; hypothetical protein 561224..561883 Mycobacterium vanbaalenii PYR-1 4644845 YP_951371.1 CDS Mvan_0521 NC_008726.1 561951 563093 D PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mmc:Mmcs_1662 epoxide hydrolase-like protein; epocide hydrolase domain-containing protein 561951..563093 Mycobacterium vanbaalenii PYR-1 4644846 YP_951372.1 CDS Mvan_0522 NC_008726.1 563256 564689 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1663 aldehyde dehydrogenase; aldehyde dehydrogenase 563256..564689 Mycobacterium vanbaalenii PYR-1 4644847 YP_951373.1 CDS Mvan_0523 NC_008726.1 565005 566465 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1664 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 565005..566465 Mycobacterium vanbaalenii PYR-1 4644848 YP_951374.1 CDS Mvan_0524 NC_008726.1 566455 566934 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1665 transcriptional regulator, MarR family; MarR family transcriptional regulator 566455..566934 Mycobacterium vanbaalenii PYR-1 4644849 YP_951375.1 CDS Mvan_0525 NC_008726.1 567169 568560 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1666 ring hydroxylating dioxygenase, alpha subunit; ring hydroxylating dioxygenase subunit alpha 567169..568560 Mycobacterium vanbaalenii PYR-1 4644850 YP_951376.1 CDS Mvan_0526 NC_008726.1 568557 569099 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1667 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 568557..569099 Mycobacterium vanbaalenii PYR-1 4644851 YP_951377.1 CDS Mvan_0527 NC_008726.1 569206 570237 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1668 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 569206..570237 Mycobacterium vanbaalenii PYR-1 4644852 YP_951378.1 CDS Mvan_0528 NC_008726.1 570290 571543 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1669 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 570290..571543 Mycobacterium vanbaalenii PYR-1 4644853 YP_951379.1 CDS Mvan_0529 NC_008726.1 571540 572706 D KEGG: mmc:Mmcs_5454 putative nonspecific lipid-transfer protein; putative nonspecific lipid-transfer protein 571540..572706 Mycobacterium vanbaalenii PYR-1 4644854 YP_951380.1 CDS Mvan_0530 NC_008726.1 572743 573201 D PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_1671 protein of unknown function DUF35; hypothetical protein 572743..573201 Mycobacterium vanbaalenii PYR-1 4644855 YP_951381.1 CDS Mvan_0531 NC_008726.1 573188 574234 D KEGG: mmc:Mmcs_1672 hypothetical protein; hypothetical protein 573188..574234 Mycobacterium vanbaalenii PYR-1 4644856 YP_951382.1 CDS Mvan_0532 NC_008726.1 574265 574462 D KEGG: mmc:Mmcs_5451 hypothetical protein; hypothetical protein 574265..574462 Mycobacterium vanbaalenii PYR-1 4644857 YP_951383.1 CDS Mvan_0533 NC_008726.1 574710 576125 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1673 ring hydroxylating dioxygenase, alpha subunit; ring hydroxylating dioxygenase subunit alpha 574710..576125 Mycobacterium vanbaalenii PYR-1 4644858 YP_951384.1 CDS Mvan_0534 NC_008726.1 576122 576676 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1674 aromatic-ring-hydroxylating dioxygenase, beta subunit; 3-phenylpropionate dioxygenase subunit beta 576122..576676 Mycobacterium vanbaalenii PYR-1 4644859 YP_951385.1 CDS Mvan_0535 NC_008726.1 576776 577219 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_1675 cupin 2, conserved barrel; cupin 576776..577219 Mycobacterium vanbaalenii PYR-1 4644860 YP_951386.1 CDS Mvan_0536 NC_008726.1 577309 578202 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1676 6-phosphogluconate dehydrogenase, NAD-binding protein; 6-phosphogluconate dehydrogenase 577309..578202 Mycobacterium vanbaalenii PYR-1 4644861 YP_951387.1 CDS Mvan_0537 NC_008726.1 578353 578871 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1677 transcriptional regulator, MarR family; MarR family transcriptional regulator 578353..578871 Mycobacterium vanbaalenii PYR-1 4644862 YP_951388.1 CDS Mvan_0538 NC_008726.1 579323 580222 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1679 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 579323..580222 Mycobacterium vanbaalenii PYR-1 4644863 YP_951389.1 CDS Mvan_0539 NC_008726.1 580222 581538 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1680 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 580222..581538 Mycobacterium vanbaalenii PYR-1 4644864 YP_951390.1 CDS Mvan_0540 NC_008726.1 581541 582053 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 581541..582053 Mycobacterium vanbaalenii PYR-1 4644865 YP_951391.1 CDS Mvan_0541 NC_008726.1 582090 583319 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1682 oxidoreductase-like protein; oxidoreductase domain-containing protein 582090..583319 Mycobacterium vanbaalenii PYR-1 4644866 YP_951392.1 CDS Mvan_0542 NC_008726.1 583339 584292 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mmc:Mmcs_1683 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase III subunit B 583339..584292 Mycobacterium vanbaalenii PYR-1 4644867 YP_951393.1 CDS Mvan_0543 NC_008726.1 584826 585605 D PFAM: class II aldolase/adducin family protein; KEGG: mmc:Mmcs_1684 class II aldolase/adducin-like protein; class II aldolase/adducin family protein 584826..585605 Mycobacterium vanbaalenii PYR-1 4644279 YP_951394.1 CDS Mvan_0544 NC_008726.1 585788 586693 D Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 585788..586693 Mycobacterium vanbaalenii PYR-1 4644280 YP_951395.1 CDS Mvan_0545 NC_008726.1 586706 587596 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 586706..587596 Mycobacterium vanbaalenii PYR-1 4644281 YP_951396.1 CDS Mvan_0546 NC_008726.1 587669 589069 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1689 ring hydroxylating dioxygenase, alpha subunit; ring hydroxylating dioxygenase subunit alpha 587669..589069 Mycobacterium vanbaalenii PYR-1 4644282 YP_951397.1 CDS Mvan_0547 NC_008726.1 589134 589652 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 589134..589652 Mycobacterium vanbaalenii PYR-1 4644283 YP_951398.1 CDS Mvan_0548 NC_008726.1 589701 589919 D KEGG: mmc:Mmcs_1691 hypothetical protein; hypothetical protein 589701..589919 Mycobacterium vanbaalenii PYR-1 4644284 YP_951399.1 CDS Mvan_0549 NC_008726.1 590085 590294 D KEGG: bxe:Bxe_C0638 ferredoxin; ferredoxin 590085..590294 Mycobacterium vanbaalenii PYR-1 4644285 YP_951400.1 CDS Mvan_0550 NC_008726.1 590939 592171 D PFAM: transposase, mutator type; KEGG: mpa:MAP3759c hypothetical protein; transposase, mutator type 590939..592171 Mycobacterium vanbaalenii PYR-1 4644286 YP_951401.1 CDS Mvan_0551 NC_008726.1 593000 593599 D KEGG: mbo:Mb2834 hypothetical protein; hypothetical protein 593000..593599 Mycobacterium vanbaalenii PYR-1 4644287 YP_951402.1 CDS Mvan_0552 NC_008726.1 593711 594004 D KEGG: mbo:Mb2835 putative transposase [first part]; putative transposase 593711..594004 Mycobacterium vanbaalenii PYR-1 4644288 YP_951403.1 CDS Mvan_0553 NC_008726.1 594059 595606 D PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein; transposase, IS4 family protein 594059..595606 Mycobacterium vanbaalenii PYR-1 4644289 YP_951404.1 CDS Mvan_0555 NC_008726.1 596981 597796 D SMART: AAA ATPase; KEGG: mtc:MT2880 general secretion pathway protein A-related protein; ATPase AAA 596981..597796 Mycobacterium vanbaalenii PYR-1 4644291 YP_951405.1 CDS Mvan_0557 NC_008726.1 599300 600304 R PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: mmc:Mmcs_1695 ketopantoate reductase ApbA/PanE-like protein; ketopantoate reductase ApbA/PanE complement(599300..600304) Mycobacterium vanbaalenii PYR-1 4644293 YP_951406.1 CDS Mvan_0558 NC_008726.1 600304 601281 R PFAM: dihydrodipicolinate synthetase; KEGG: mmc:Mmcs_1696 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(600304..601281) Mycobacterium vanbaalenii PYR-1 4644294 YP_951407.1 CDS Mvan_0559 NC_008726.1 601556 602305 R PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator; regulatory proteins IclR complement(601556..602305) Mycobacterium vanbaalenii PYR-1 4644295 YP_951408.1 CDS Mvan_0560 NC_008726.1 602378 603175 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mmc:Mmcs_1698 protocatechuate 3,4-dioxygenase, beta subunit; protocatechuate 3,4-dioxygenase subunit beta 602378..603175 Mycobacterium vanbaalenii PYR-1 4644296 YP_951409.1 CDS Mvan_0561 NC_008726.1 603175 603744 D TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mmc:Mmcs_1699 protocatechuate 3,4-dioxygenase, alpha subunit; protocatechuate 3,4-dioxygenase subunit alpha 603175..603744 Mycobacterium vanbaalenii PYR-1 4644297 YP_951410.1 CDS Mvan_0562 NC_008726.1 603741 604946 D PFAM: fumarate lyase; KEGG: mmc:Mmcs_1700 fumarate lyase; fumarate lyase 603741..604946 Mycobacterium vanbaalenii PYR-1 4644298 YP_951411.1 CDS Mvan_0563 NC_008726.1 604943 606124 D TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_1701 4-carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase 604943..606124 Mycobacterium vanbaalenii PYR-1 4644299 YP_951412.1 CDS Mvan_0564 NC_008726.1 606121 606819 D KEGG: mmc:Mmcs_1702 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 606121..606819 Mycobacterium vanbaalenii PYR-1 4644300 YP_951413.1 CDS Mvan_0565 NC_008726.1 606816 607538 D KEGG: mmc:Mmcs_1703 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 606816..607538 Mycobacterium vanbaalenii PYR-1 4644301 YP_951414.1 CDS Mvan_0567 NC_008726.1 608329 608919 D KEGG: mmc:Mmcs_1705 hypothetical protein; hypothetical protein 608329..608919 Mycobacterium vanbaalenii PYR-1 4644303 YP_951415.1 CDS Mvan_0568 NC_008726.1 609172 609618 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_1706 cupin 2, conserved barrel; cupin 609172..609618 Mycobacterium vanbaalenii PYR-1 4643785 YP_951416.1 CDS Mvan_0569 NC_008726.1 609630 609968 D KEGG: mmc:Mmcs_1707 protein of unknown function DUF732; hypothetical protein 609630..609968 Mycobacterium vanbaalenii PYR-1 4643786 YP_951417.1 CDS Mvan_0570 NC_008726.1 610160 610759 D KEGG: mbo:Mb2834 hypothetical protein; hypothetical protein 610160..610759 Mycobacterium vanbaalenii PYR-1 4643787 YP_951418.1 CDS Mvan_0571 NC_008726.1 610871 612370 D PFAM: Integrase, catalytic region; KEGG: mtc:MT2879 IS1604, transposase; integrase catalytic subunit 610871..612370 Mycobacterium vanbaalenii PYR-1 4643788 YP_951419.1 CDS Mvan_0572 NC_008726.1 612367 613182 D SMART: AAA ATPase; KEGG: mtc:MT2880 general secretion pathway protein A-related protein; ATPase AAA 612367..613182 Mycobacterium vanbaalenii PYR-1 4643789 YP_951420.1 CDS Mvan_0573 NC_008726.1 613853 615646 D PFAM: Integrase, catalytic region; KEGG: sma:SAV3741 ISmav2-like transposase; integrase catalytic subunit 613853..615646 Mycobacterium vanbaalenii PYR-1 4643790 YP_951421.1 CDS Mvan_0574 NC_008726.1 615842 617479 D PFAM: transposase, IS4 family protein; KEGG: cdi:DIP0047 putative transposase (pseudogene); transposase, IS4 family protein 615842..617479 Mycobacterium vanbaalenii PYR-1 4643791 YP_951422.1 CDS Mvan_0575 NC_008726.1 618110 619009 R PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_3191 integrase, catalytic region; integrase catalytic subunit complement(618110..619009) Mycobacterium vanbaalenii PYR-1 4643792 YP_951423.1 CDS Mvan_0576 NC_008726.1 619006 619338 R PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3190 transposase IS3/IS911; transposase IS3/IS911 family protein complement(619006..619338) Mycobacterium vanbaalenii PYR-1 4643793 YP_951424.1 CDS Mvan_0578 NC_008726.1 620480 620815 D PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_0845 transposase IS3/IS911; transposase IS3/IS911 family protein 620480..620815 Mycobacterium vanbaalenii PYR-1 4643795 YP_951425.1 CDS Mvan_0579 NC_008726.1 620920 622557 D PFAM: transposase, IS4 family protein; KEGG: cdi:DIP0047 putative transposase (pseudogene); transposase, IS4 family protein 620920..622557 Mycobacterium vanbaalenii PYR-1 4643796 YP_951426.1 CDS Mvan_0580 NC_008726.1 622612 622869 D KEGG: mmc:Mmcs_2595 integrase, catalytic region; integrase, catalytic region 622612..622869 Mycobacterium vanbaalenii PYR-1 4643797 YP_951427.1 CDS Mvan_0581 NC_008726.1 623033 624265 R PFAM: transposase, mutator type; KEGG: mpa:MAP3759c hypothetical protein; transposase, mutator type complement(623033..624265) Mycobacterium vanbaalenii PYR-1 4643798 YP_951428.1 CDS Mvan_0582 NC_008726.1 624270 624665 D PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3190 transposase IS3/IS911; transposase IS3/IS911 family protein 624270..624665 Mycobacterium vanbaalenii PYR-1 4643799 YP_951429.1 CDS Mvan_0583 NC_008726.1 624662 625561 D PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_3191 integrase, catalytic region; integrase catalytic subunit 624662..625561 Mycobacterium vanbaalenii PYR-1 4643800 YP_951430.1 CDS Mvan_0585 NC_008726.1 626263 627495 D PFAM: transposase, mutator type; KEGG: mpa:MAP3759c hypothetical protein; transposase, mutator type 626263..627495 Mycobacterium vanbaalenii PYR-1 4643802 YP_951431.1 CDS Mvan_0586 NC_008726.1 627495 628820 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mth:MTH836 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase 627495..628820 Mycobacterium vanbaalenii PYR-1 4643803 YP_951432.1 CDS Mvan_0587 NC_008726.1 628890 629483 R KEGG: fra:Francci3_2381 cytidylate kinase-like; hypothetical protein complement(628890..629483) Mycobacterium vanbaalenii PYR-1 4643804 YP_951433.1 CDS Mvan_0588 NC_008726.1 629902 630423 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_4181 cupin 2, conserved barrel; cupin 2 domain-containing protein 629902..630423 Mycobacterium vanbaalenii PYR-1 4643806 YP_951434.1 CDS dcd NC_008726.1 630452 631024 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 630452..631024 Mycobacterium vanbaalenii PYR-1 4643807 YP_951435.1 CDS Mvan_0590 NC_008726.1 631279 632910 D KEGG: mmc:Mmcs_0431 hypothetical protein; hypothetical protein 631279..632910 Mycobacterium vanbaalenii PYR-1 4643808 YP_951436.1 CDS Mvan_0591 NC_008726.1 632933 633916 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(632933..633916) Mycobacterium vanbaalenii PYR-1 4646048 YP_951437.1 CDS Mvan_0592 NC_008726.1 633913 634779 R PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa4730 putative hydrolase; alpha/beta hydrolase fold protein complement(633913..634779) Mycobacterium vanbaalenii PYR-1 4646049 YP_951438.1 CDS Mvan_0593 NC_008726.1 634776 636338 R PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mxa:MXAN_7320 FAD-binding monooxygenase, PheA/TfdB family; FAD-binding monooxygenase complement(634776..636338) Mycobacterium vanbaalenii PYR-1 4646050 YP_951439.1 CDS Mvan_0594 NC_008726.1 636452 637078 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP1732c hypothetical protein; TetR family transcriptional regulator 636452..637078 Mycobacterium vanbaalenii PYR-1 4646051 YP_951440.1 CDS Mvan_0595 NC_008726.1 637075 637863 D PFAM: Hydratase/decarboxylase; KEGG: mta:Moth_1777 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 637075..637863 Mycobacterium vanbaalenii PYR-1 4646052 YP_951441.1 CDS Mvan_0596 NC_008726.1 637871 638818 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 637871..638818 Mycobacterium vanbaalenii PYR-1 4646053 YP_951442.1 CDS Mvan_0597 NC_008726.1 638815 639831 D catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 638815..639831 Mycobacterium vanbaalenii PYR-1 4646054 YP_951443.1 CDS Mvan_0598 NC_008726.1 639913 641253 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mpa:MAP3825 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 639913..641253 Mycobacterium vanbaalenii PYR-1 4646055 YP_951444.1 CDS Mvan_0599 NC_008726.1 641263 641586 D KEGG: mmc:Mmcs_0432 hypothetical protein; hypothetical protein 641263..641586 Mycobacterium vanbaalenii PYR-1 4646056 YP_951445.1 CDS Mvan_0600 NC_008726.1 641586 642917 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_0433 cytochrome P450; cytochrome P450 641586..642917 Mycobacterium vanbaalenii PYR-1 4646057 YP_951446.1 CDS Mvan_0601 NC_008726.1 642920 643666 D PFAM: protein of unknown function DUF1503; KEGG: mmc:Mmcs_0434 protein of unknown function DUF1503; hypothetical protein 642920..643666 Mycobacterium vanbaalenii PYR-1 4646058 YP_951447.1 CDS Mvan_0602 NC_008726.1 643684 644052 D KEGG: mmc:Mmcs_0435 hypothetical protein; hypothetical protein 643684..644052 Mycobacterium vanbaalenii PYR-1 4646059 YP_951448.1 CDS Mvan_0603 NC_008726.1 644052 644915 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mmc:Mmcs_0436 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 644052..644915 Mycobacterium vanbaalenii PYR-1 4646060 YP_951449.1 CDS Mvan_0604 NC_008726.1 645190 646509 D PFAM: transposase, mutator type; KEGG: mmc:Mmcs_5459 transposase, mutator type; transposase, mutator type 645190..646509 Mycobacterium vanbaalenii PYR-1 4646061 YP_951450.1 CDS Mvan_0605 NC_008726.1 646610 648124 D PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_0199 amino acid permease-associated region; amino acid permease-associated protein 646610..648124 Mycobacterium vanbaalenii PYR-1 4646062 YP_951451.1 CDS Mvan_0606 NC_008726.1 648190 648927 R PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_0508 GntR-like protein; GntR family transcriptional regulator complement(648190..648927) Mycobacterium vanbaalenii PYR-1 4646063 YP_951452.1 CDS Mvan_0607 NC_008726.1 649136 649867 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: tma:TM1724 3-oxoacyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 649136..649867 Mycobacterium vanbaalenii PYR-1 4646064 YP_951453.1 CDS Mvan_0608 NC_008726.1 649861 651147 D PFAM: protein of unknown function DUF1116; KEGG: mta:Moth_2121 protein of unknown function DUF1116; hypothetical protein 649861..651147 Mycobacterium vanbaalenii PYR-1 4646065 YP_951454.1 CDS Mvan_0609 NC_008726.1 651144 651923 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: cvi:CV1482 2,3-dihydroxybenzoate-2,3-dehydrogenase; short-chain dehydrogenase/reductase SDR 651144..651923 Mycobacterium vanbaalenii PYR-1 4646066 YP_951455.1 CDS Mvan_0610 NC_008726.1 651920 652984 D hypothetical protein 651920..652984 Mycobacterium vanbaalenii PYR-1 4646067 YP_951456.1 CDS Mvan_0611 NC_008726.1 652981 654246 D PFAM: glutamine synthetase, catalytic region; KEGG: mxa:MXAN_5630 glutamine synthetase family protein; glutamate--ammonia ligase 652981..654246 Mycobacterium vanbaalenii PYR-1 4646068 YP_951457.1 CDS Mvan_0612 NC_008726.1 654243 655622 D PFAM: glutamine synthetase, catalytic region; KEGG: rxy:Rxyl_3196 glutamate--ammonia ligase; glutamate--ammonia ligase 654243..655622 Mycobacterium vanbaalenii PYR-1 4646069 YP_951458.1 CDS Mvan_0613 NC_008726.1 655679 656617 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: reu:Reut_A1537 lipolytic enzyme; alpha/beta hydrolase domain-containing protein 655679..656617 Mycobacterium vanbaalenii PYR-1 4646070 YP_951459.1 CDS Mvan_0614 NC_008726.1 656614 657342 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO1611 putative dehydrogenase; short-chain dehydrogenase/reductase SDR 656614..657342 Mycobacterium vanbaalenii PYR-1 4646071 YP_951460.1 CDS Mvan_0615 NC_008726.1 657454 658923 D KEGG: mmc:Mmcs_2024 cyclohexanone monooxygenase; cyclohexanone monooxygenase 657454..658923 Mycobacterium vanbaalenii PYR-1 4646072 YP_951461.1 CDS Mvan_0616 NC_008726.1 658949 659686 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: sth:STH2933 putative glutamine amidotransferase; peptidase C26 658949..659686 Mycobacterium vanbaalenii PYR-1 4646498 YP_951462.1 CDS Mvan_0617 NC_008726.1 659688 660923 R PFAM: YibE/F family protein; KEGG: mmc:Mmcs_0440 YibE/F-like protein; YibE/F family protein complement(659688..660923) Mycobacterium vanbaalenii PYR-1 4646499 YP_951463.1 CDS Mvan_0618 NC_008726.1 661194 662474 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(661194..662474) Mycobacterium vanbaalenii PYR-1 4646500 YP_951464.1 CDS Mvan_0619 NC_008726.1 662573 665656 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mmc:Mmcs_0442 protein of unknown function DUF224, cysteine-rich region; hypothetical protein complement(662573..665656) Mycobacterium vanbaalenii PYR-1 4646501 YP_951465.1 CDS Mvan_0620 NC_008726.1 665797 668328 R PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_0443 transcriptional regulator, LuxR family; response regulator receiver protein complement(665797..668328) Mycobacterium vanbaalenii PYR-1 4646502 YP_951466.1 CDS Mvan_0621 NC_008726.1 668337 670169 R KEGG: mmc:Mmcs_0444 conserved hypothetical proline and threonine rich protein; hypothetical protein complement(668337..670169) Mycobacterium vanbaalenii PYR-1 4646503 YP_951467.1 CDS Mvan_0622 NC_008726.1 670341 670856 D KEGG: mmc:Mmcs_0445 hypothetical protein; hypothetical protein 670341..670856 Mycobacterium vanbaalenii PYR-1 4646504 YP_951468.1 CDS Mvan_0623 NC_008726.1 671120 672169 D KEGG: mmc:Mmcs_0446 hypothetical protein; hypothetical protein 671120..672169 Mycobacterium vanbaalenii PYR-1 4646505 YP_951469.1 CDS Mvan_0624 NC_008726.1 672258 674066 D KEGG: mmc:Mmcs_0447 hypothetical protein; hypothetical protein 672258..674066 Mycobacterium vanbaalenii PYR-1 4646506 YP_951470.1 CDS Mvan_0625 NC_008726.1 674136 675626 D KEGG: mmc:Mmcs_0448 isoniazid inductible gene protein IniC; isoniazid inductible gene protein IniC 674136..675626 Mycobacterium vanbaalenii PYR-1 4646507 YP_951471.1 CDS Mvan_0626 NC_008726.1 675657 677486 D KEGG: mmc:Mmcs_0449 conserved hypothetical proline rich protein; hypothetical protein 675657..677486 Mycobacterium vanbaalenii PYR-1 4646508 YP_951472.1 CDS Mvan_0627 NC_008726.1 677483 677998 R KEGG: mmc:Mmcs_0450 hypothetical protein; hypothetical protein complement(677483..677998) Mycobacterium vanbaalenii PYR-1 4646509 YP_951473.1 CDS Mvan_0628 NC_008726.1 678024 678449 R KEGG: lma:LmjF12.0960 surface antigen protein 2, putative; hypothetical protein complement(678024..678449) Mycobacterium vanbaalenii PYR-1 4646510 YP_951474.1 CDS Mvan_0629 NC_008726.1 678484 679443 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_0451 luciferase-like protein; luciferase family protein complement(678484..679443) Mycobacterium vanbaalenii PYR-1 4646511 YP_951475.1 CDS Mvan_0630 NC_008726.1 679452 680075 R KEGG: mpa:MAP2070 hypothetical protein; hypothetical protein complement(679452..680075) Mycobacterium vanbaalenii PYR-1 4646512 YP_951476.1 CDS Mvan_0631 NC_008726.1 680119 680730 R KEGG: mmc:Mmcs_0460 putative lipoprotein LpqJ; putative lipoprotein LpqJ complement(680119..680730) Mycobacterium vanbaalenii PYR-1 4646513 YP_951477.1 CDS Mvan_0632 NC_008726.1 680806 682674 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 680806..682674 Mycobacterium vanbaalenii PYR-1 4646514 YP_951478.1 CDS Mvan_0633 NC_008726.1 682685 683107 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_1083 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 682685..683107 Mycobacterium vanbaalenii PYR-1 4646515 YP_951479.1 CDS dnaK NC_008726.1 683558 685426 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 683558..685426 Mycobacterium vanbaalenii PYR-1 4646516 YP_951480.1 CDS Mvan_0635 NC_008726.1 685423 686052 D PFAM: GrpE protein; KEGG: mmc:Mmcs_0463 GrpE protein; GrpE protein HSP-70 cofactor 685423..686052 Mycobacterium vanbaalenii PYR-1 4646517 YP_951481.1 CDS Mvan_0636 NC_008726.1 686098 687279 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 686098..687279 Mycobacterium vanbaalenii PYR-1 4646518 YP_951482.1 CDS Mvan_0637 NC_008726.1 687279 687653 D PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_0465 transcriptional regulator, MerR family; MerR family transcriptional regulator 687279..687653 Mycobacterium vanbaalenii PYR-1 4646519 YP_951483.1 CDS Mvan_0638 NC_008726.1 687751 688653 R PFAM: Aldose 1-epimerase; KEGG: mmc:Mmcs_0469 aldose 1-epimerase; aldose 1-epimerase complement(687751..688653) Mycobacterium vanbaalenii PYR-1 4646520 YP_951484.1 CDS Mvan_0639 NC_008726.1 688678 689844 R PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_0470 oxidoreductase FAD-binding region; oxidoreductase FAD-binding subunit complement(688678..689844) Mycobacterium vanbaalenii PYR-1 4646521 YP_951485.1 CDS Mvan_0640 NC_008726.1 689861 690874 R KEGG: mmc:Mmcs_0471 hypothetical protein; hypothetical protein complement(689861..690874) Mycobacterium vanbaalenii PYR-1 4646522 YP_951486.1 CDS Mvan_0641 NC_008726.1 690974 691609 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0472 transcriptional regulator, TetR family; TetR family transcriptional regulator 690974..691609 Mycobacterium vanbaalenii PYR-1 4647299 YP_951487.1 CDS Mvan_0642 NC_008726.1 691598 692275 R KEGG: mmc:Mmcs_0473 hypothetical protein; hypothetical protein complement(691598..692275) Mycobacterium vanbaalenii PYR-1 4647300 YP_951488.1 CDS Mvan_0643 NC_008726.1 692327 693283 D KEGG: bja:blr3881 hypothetical protein; hypothetical protein 692327..693283 Mycobacterium vanbaalenii PYR-1 4647301 YP_951489.1 CDS Mvan_0644 NC_008726.1 693335 694333 R PFAM: Acetamidase/Formamidase; KEGG: mmc:Mmcs_2656 acetamidase/formamidase; acetamidase/formamidase complement(693335..694333) Mycobacterium vanbaalenii PYR-1 4647302 YP_951490.1 CDS Mvan_0645 NC_008726.1 694320 695090 R KEGG: mpa:MAP0463 hypothetical protein; hypothetical protein complement(694320..695090) Mycobacterium vanbaalenii PYR-1 4647303 YP_951491.1 CDS Mvan_0646 NC_008726.1 695109 695336 R KEGG: mmc:Mmcs_4755 hypothetical protein; hypothetical protein complement(695109..695336) Mycobacterium vanbaalenii PYR-1 4647304 YP_951492.1 CDS Mvan_0647 NC_008726.1 695588 696280 D KEGG: sme:SMc01423 probable nitrile hydratase subunit beta protein; nitrile hydratase 695588..696280 Mycobacterium vanbaalenii PYR-1 4647305 YP_951493.1 CDS Mvan_0648 NC_008726.1 696322 696918 D KEGG: rpb:RPB_2704 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha 696322..696918 Mycobacterium vanbaalenii PYR-1 4647306 YP_951494.1 CDS Mvan_0649 NC_008726.1 696915 697301 D hypothetical protein 696915..697301 Mycobacterium vanbaalenii PYR-1 4647307 YP_951495.1 CDS Mvan_0650 NC_008726.1 697311 697832 D KEGG: ecj:JW0309 predicted inner membrane protein; hypothetical protein 697311..697832 Mycobacterium vanbaalenii PYR-1 4647308 YP_951496.1 CDS Mvan_0651 NC_008726.1 697902 698354 D PFAM: regulatory protein, MarR; KEGG: sma:SAV1188 MarR-family transcriptional regulator; MarR family transcriptional regulator 697902..698354 Mycobacterium vanbaalenii PYR-1 4647309 YP_951497.1 CDS Mvan_0652 NC_008726.1 698486 699544 D KEGG: sma:SAV1189 regulatory protein; regulatory protein 698486..699544 Mycobacterium vanbaalenii PYR-1 4647310 YP_951498.1 CDS Mvan_0653 NC_008726.1 699658 700119 D PFAM: GtrA family protein; KEGG: nfa:nfa10090 hypothetical protein; GtrA family protein 699658..700119 Mycobacterium vanbaalenii PYR-1 4647311 YP_951499.1 CDS Mvan_0655 NC_008726.1 700536 700868 R KEGG: mmc:Mmcs_0474 hypothetical protein; hypothetical protein complement(700536..700868) Mycobacterium vanbaalenii PYR-1 4647313 YP_951500.1 CDS Mvan_0656 NC_008726.1 700881 701648 R KEGG: mmc:Mmcs_0475 hypothetical protein; hypothetical protein complement(700881..701648) Mycobacterium vanbaalenii PYR-1 4647314 YP_951501.1 CDS Mvan_0657 NC_008726.1 702030 702560 D KEGG: mmc:Mmcs_0476 hypothetical protein; hypothetical protein 702030..702560 Mycobacterium vanbaalenii PYR-1 4647315 YP_951502.1 CDS Mvan_0658 NC_008726.1 702584 703219 R KEGG: blo:BL0349 narrowly conserved hypothetical protein; hypothetical protein complement(702584..703219) Mycobacterium vanbaalenii PYR-1 4647316 YP_951503.1 CDS Mvan_0659 NC_008726.1 703401 705947 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_0478 ATPase AAA-2; ATPase 703401..705947 Mycobacterium vanbaalenii PYR-1 4647317 YP_951504.1 CDS Mvan_0660 NC_008726.1 706162 706941 D KEGG: mmc:Mmcs_0479 hypothetical protein; hypothetical protein 706162..706941 Mycobacterium vanbaalenii PYR-1 4647318 YP_951505.1 CDS Mvan_0661 NC_008726.1 706956 707732 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0480 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 706956..707732 Mycobacterium vanbaalenii PYR-1 4647319 YP_951506.1 CDS Mvan_0662 NC_008726.1 707739 708632 D KEGG: mmc:Mmcs_0481 hypothetical protein; hypothetical protein 707739..708632 Mycobacterium vanbaalenii PYR-1 4647320 YP_951507.1 CDS Mvan_0663 NC_008726.1 708625 709269 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpa:MAP3859 hypothetical protein; tRNA/rRNA methyltransferase SpoU 708625..709269 Mycobacterium vanbaalenii PYR-1 4647321 YP_951508.1 CDS Mvan_0664 NC_008726.1 709153 710760 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0483 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(709153..710760) Mycobacterium vanbaalenii PYR-1 4647322 YP_951509.1 CDS Mvan_0665 NC_008726.1 710757 711296 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0484 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(710757..711296) Mycobacterium vanbaalenii PYR-1 4647323 YP_951510.1 CDS Mvan_0666 NC_008726.1 711370 712482 D PFAM: glycoside hydrolase, family 76; KEGG: mmc:Mmcs_0485 glycoside hydrolase, family 76; glycoside hydrolase family protein 711370..712482 Mycobacterium vanbaalenii PYR-1 4645594 YP_951511.1 CDS Mvan_0667 NC_008726.1 712469 714322 D PFAM: DSBA oxidoreductase; Na+/H+ antiporter NhaA; KEGG: mmc:Mmcs_0486 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 712469..714322 Mycobacterium vanbaalenii PYR-1 4645595 YP_951512.1 CDS Mvan_0668 NC_008726.1 714319 715017 R KEGG: mmc:Mmcs_0501 hypothetical protein; hypothetical protein complement(714319..715017) Mycobacterium vanbaalenii PYR-1 4645596 YP_951513.1 CDS Mvan_0669 NC_008726.1 715052 716065 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_0502 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 715052..716065 Mycobacterium vanbaalenii PYR-1 4645597 YP_951514.1 CDS Mvan_0670 NC_008726.1 716162 717199 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 716162..717199 Mycobacterium vanbaalenii PYR-1 4645598 YP_951515.1 CDS Mvan_0671 NC_008726.1 717264 718052 R KEGG: mmc:Mmcs_0504 hypothetical protein; hypothetical protein complement(717264..718052) Mycobacterium vanbaalenii PYR-1 4645599 YP_951516.1 CDS Mvan_0672 NC_008726.1 718114 718530 D KEGG: mmc:Mmcs_0505 hypothetical protein; hypothetical protein 718114..718530 Mycobacterium vanbaalenii PYR-1 4645600 YP_951517.1 CDS Mvan_0673 NC_008726.1 718544 719443 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmc:Mmcs_0506 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(718544..719443) Mycobacterium vanbaalenii PYR-1 4645601 YP_951518.1 CDS Mvan_0674 NC_008726.1 719484 720263 R PFAM: peptidase M50; KEGG: mmc:Mmcs_0507 peptidase M50; peptidase M50 complement(719484..720263) Mycobacterium vanbaalenii PYR-1 4645602 YP_951519.1 CDS Mvan_0675 NC_008726.1 720299 721660 D PFAM: cytochrome P450; KEGG: mbo:Mb3710c probable cytochrome P450 137 CYP137; cytochrome P450 720299..721660 Mycobacterium vanbaalenii PYR-1 4645603 YP_951520.1 CDS Mvan_0676 NC_008726.1 721602 722204 R KEGG: mmc:Mmcs_0514 hypothetical protein; hypothetical protein complement(721602..722204) Mycobacterium vanbaalenii PYR-1 4645604 YP_951521.1 CDS Mvan_0677 NC_008726.1 722297 723592 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 722297..723592 Mycobacterium vanbaalenii PYR-1 4645605 YP_951522.1 CDS Mvan_0678 NC_008726.1 723589 724233 D PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_0516 thioesterase superfamily; thioesterase superfamily protein 723589..724233 Mycobacterium vanbaalenii PYR-1 4645606 YP_951523.1 CDS Mvan_0679 NC_008726.1 724260 725363 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_4442 diguanylate cyclase; diguanylate cyclase 724260..725363 Mycobacterium vanbaalenii PYR-1 4645607 YP_951524.1 CDS Mvan_0680 NC_008726.1 725389 726042 D KEGG: mmc:Mmcs_0517 hypothetical protein; hypothetical protein 725389..726042 Mycobacterium vanbaalenii PYR-1 4645608 YP_951525.1 CDS Mvan_0681 NC_008726.1 725999 726193 R KEGG: fra:Francci3_1600 putative ferredoxin; putative ferredoxin complement(725999..726193) Mycobacterium vanbaalenii PYR-1 4645609 YP_951526.1 CDS Mvan_0682 NC_008726.1 726194 727414 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_0518 cytochrome P450; cytochrome P450 complement(726194..727414) Mycobacterium vanbaalenii PYR-1 4645610 YP_951527.1 CDS Mvan_0683 NC_008726.1 727424 729463 R PFAM: MMPL domain protein; KEGG: mmc:Mmcs_0519 MmpL; MMPL domain-containing protein complement(727424..729463) Mycobacterium vanbaalenii PYR-1 4645611 YP_951528.1 CDS Mvan_0684 NC_008726.1 729525 730034 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_0520 transcriptional regulator, MarR family; MarR family transcriptional regulator 729525..730034 Mycobacterium vanbaalenii PYR-1 4645612 YP_951529.1 CDS Mvan_0685 NC_008726.1 730046 731185 D PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; KEGG: mmc:Mmcs_0523 ATP-dependent carboxylate-amine ligase-like, ATP-grasp; ATP-dependent carboxylate-amine ligase domain-containing protein 730046..731185 Mycobacterium vanbaalenii PYR-1 4645613 YP_951530.1 CDS Mvan_0686 NC_008726.1 731182 731625 D KEGG: mmc:Mmcs_0524 hypothetical protein; hypothetical protein 731182..731625 Mycobacterium vanbaalenii PYR-1 4645614 YP_951531.1 CDS Mvan_0687 NC_008726.1 731645 732067 D SMART: Rhodanese domain protein; KEGG: mmc:Mmcs_0525 rhodanese-like protein; rhodanese domain-containing protein 731645..732067 Mycobacterium vanbaalenii PYR-1 4645615 YP_951532.1 CDS Mvan_0688 NC_008726.1 732064 733299 D KEGG: mmc:Mmcs_0526 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-succinylhomoserine sulfhydrylase 732064..733299 Mycobacterium vanbaalenii PYR-1 4645616 YP_951533.1 CDS Mvan_0689 NC_008726.1 733300 733710 D KEGG: mmc:Mmcs_0527 hypothetical protein; hypothetical protein 733300..733710 Mycobacterium vanbaalenii PYR-1 4645617 YP_951534.1 CDS Mvan_0690 NC_008726.1 733762 734640 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0528 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(733762..734640) Mycobacterium vanbaalenii PYR-1 4645618 YP_951535.1 CDS Mvan_0691 NC_008726.1 734696 735340 R KEGG: mmc:Mmcs_1143 hypothetical protein; hypothetical protein complement(734696..735340) Mycobacterium vanbaalenii PYR-1 4643634 YP_951536.1 CDS Mvan_0692 NC_008726.1 735327 736052 R PFAM: protein of unknown function DUF899, thioredoxin family protein; KEGG: mmc:Mmcs_1142 protein of unknown function DUF899, thioredoxin-like protein; hypothetical protein complement(735327..736052) Mycobacterium vanbaalenii PYR-1 4643635 YP_951537.1 CDS Mvan_0693 NC_008726.1 736116 736448 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_1141 transcriptional regulator, ArsR family; regulatory protein ArsR 736116..736448 Mycobacterium vanbaalenii PYR-1 4643636 YP_951538.1 CDS Mvan_0694 NC_008726.1 736445 736924 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mmc:Mmcs_1140 activator of HSP90 ATPase 1-like protein; activator of Hsp90 ATPase 1 family protein 736445..736924 Mycobacterium vanbaalenii PYR-1 4643637 YP_951539.1 CDS Mvan_0695 NC_008726.1 736921 737472 D PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_0529 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 736921..737472 Mycobacterium vanbaalenii PYR-1 4643638 YP_951540.1 CDS Mvan_0696 NC_008726.1 737545 737808 D KEGG: mmc:Mmcs_0530 hypothetical protein; hypothetical protein 737545..737808 Mycobacterium vanbaalenii PYR-1 4643639 YP_951541.1 CDS Mvan_0697 NC_008726.1 737836 738576 R PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_0531 beta-lactamase-like protein; beta-lactamase domain-containing protein complement(737836..738576) Mycobacterium vanbaalenii PYR-1 4643640 YP_951542.1 CDS Mvan_0698 NC_008726.1 738600 739610 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_0532 luciferase-like protein; luciferase family protein 738600..739610 Mycobacterium vanbaalenii PYR-1 4643641 YP_951543.1 CDS Mvan_0699 NC_008726.1 739627 740598 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mmc:Mmcs_0928 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 739627..740598 Mycobacterium vanbaalenii PYR-1 4643642 YP_951544.1 CDS Mvan_0700 NC_008726.1 740616 742694 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 740616..742694 Mycobacterium vanbaalenii PYR-1 4643643 YP_951545.1 CDS Mvan_0701 NC_008726.1 742700 743869 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 742700..743869 Mycobacterium vanbaalenii PYR-1 4643644 YP_951546.1 CDS Mvan_0702 NC_008726.1 743789 744247 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2898 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(743789..744247) Mycobacterium vanbaalenii PYR-1 4643645 YP_951547.1 CDS Mvan_0703 NC_008726.1 744534 746801 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0540 serine/threonine protein kinase; protein kinase complement(744534..746801) Mycobacterium vanbaalenii PYR-1 4643646 YP_951548.1 CDS Mvan_0704 NC_008726.1 746801 747799 R PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_0541 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(746801..747799) Mycobacterium vanbaalenii PYR-1 4643647 YP_951549.1 CDS Mvan_0705 NC_008726.1 747799 749118 R KEGG: mmc:Mmcs_0542 putative conserved membrane protein; hypothetical protein complement(747799..749118) Mycobacterium vanbaalenii PYR-1 4643648 YP_951550.1 CDS Mvan_0706 NC_008726.1 749227 749766 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_0543 NUDIX hydrolase; NUDIX hydrolase 749227..749766 Mycobacterium vanbaalenii PYR-1 4643649 YP_951551.1 CDS thiE NC_008726.1 749750 750415 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(749750..750415) Mycobacterium vanbaalenii PYR-1 4643650 YP_951552.1 CDS Mvan_0708 NC_008726.1 750552 751568 D TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0545 glycine oxidase ThiO; glycine oxidase ThiO 750552..751568 Mycobacterium vanbaalenii PYR-1 4643651 YP_951553.1 CDS Mvan_0709 NC_008726.1 751565 751762 D with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 751565..751762 Mycobacterium vanbaalenii PYR-1 4643652 YP_951554.1 CDS thiG NC_008726.1 751755 752552 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 751755..752552 Mycobacterium vanbaalenii PYR-1 4643653 YP_951555.1 CDS Mvan_0711 NC_008726.1 752561 753307 D KEGG: mpa:MAP3901 hypothetical protein; hypothetical protein 752561..753307 Mycobacterium vanbaalenii PYR-1 4643654 YP_951556.1 CDS Mvan_0712 NC_008726.1 753304 754209 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_0549 ABC transporter related; ABC transporter--like protein 753304..754209 Mycobacterium vanbaalenii PYR-1 4643655 YP_951557.1 CDS Mvan_0713 NC_008726.1 754206 754964 D KEGG: mmc:Mmcs_0550 putative ABC transporter membrane protein; putative ABC transporter membrane protein 754206..754964 Mycobacterium vanbaalenii PYR-1 4643656 YP_951558.1 CDS Mvan_0714 NC_008726.1 754966 755886 D PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb1155 probable epoxide hydrolase EphC (epoxide hydratase); alpha/beta hydrolase fold protein 754966..755886 Mycobacterium vanbaalenii PYR-1 4643510 YP_951559.1 CDS Mvan_0715 NC_008726.1 755888 757396 D PFAM: protease-associated PA domain protein; peptidase M28; KEGG: mmc:Mmcs_0553 lysyl aminopeptidase; aminopeptidase Y 755888..757396 Mycobacterium vanbaalenii PYR-1 4643511 YP_951560.1 CDS Mvan_0716 NC_008726.1 757393 758859 D PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; KEGG: mmc:Mmcs_0554 lysyl aminopeptidase; aminopeptidase Y 757393..758859 Mycobacterium vanbaalenii PYR-1 4643512 YP_951561.1 CDS Mvan_0717 NC_008726.1 758856 760100 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mmc:Mmcs_0556 uracil-xanthine permease; uracil-xanthine permease complement(758856..760100) Mycobacterium vanbaalenii PYR-1 4643513 YP_951562.1 CDS Mvan_0718 NC_008726.1 760097 761323 R PFAM: amino acid permease-associated region; Amino acid transporter, transmembrane; KEGG: mmc:Mmcs_0557 amino acid permease-associated region; amino acid permease-associated protein complement(760097..761323) Mycobacterium vanbaalenii PYR-1 4643514 YP_951563.1 CDS Mvan_0719 NC_008726.1 761346 762572 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0559 transcriptional regulator, TetR family; TetR family transcriptional regulator 761346..762572 Mycobacterium vanbaalenii PYR-1 4643515 YP_951564.1 CDS Mvan_0720 NC_008726.1 762539 762805 R KEGG: mmc:Mmcs_0560 hypothetical protein; hypothetical protein complement(762539..762805) Mycobacterium vanbaalenii PYR-1 4643516 YP_951565.1 CDS Mvan_0721 NC_008726.1 762815 764302 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0561 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(762815..764302) Mycobacterium vanbaalenii PYR-1 4643517 YP_951566.1 CDS Mvan_0722 NC_008726.1 764333 764962 R KEGG: mmc:Mmcs_0562 hypothetical protein; hypothetical protein complement(764333..764962) Mycobacterium vanbaalenii PYR-1 4643518 YP_951567.1 CDS Mvan_0723 NC_008726.1 764977 765591 R KEGG: mmc:Mmcs_0563 hypothetical protein; hypothetical protein complement(764977..765591) Mycobacterium vanbaalenii PYR-1 4643519 YP_951568.1 CDS Mvan_0724 NC_008726.1 765588 766424 R catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase complement(765588..766424) Mycobacterium vanbaalenii PYR-1 4643520 YP_951569.1 CDS Mvan_0725 NC_008726.1 766421 767971 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(766421..767971) Mycobacterium vanbaalenii PYR-1 4643521 YP_951570.1 CDS Mvan_0726 NC_008726.1 768189 769919 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0565 major facilitator superfamily MFS_1; major facilitator superfamily transporter 768189..769919 Mycobacterium vanbaalenii PYR-1 4643522 YP_951571.1 CDS Mvan_0727 NC_008726.1 769916 770296 R hypothetical protein complement(769916..770296) Mycobacterium vanbaalenii PYR-1 4643523 YP_951572.1 CDS Mvan_0728 NC_008726.1 770307 771914 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2855 protein of unknown function DUF222; hypothetical protein complement(770307..771914) Mycobacterium vanbaalenii PYR-1 4643524 YP_951573.1 CDS Mvan_0729 NC_008726.1 772124 772423 D KEGG: mmc:Mmcs_5106 hypothetical protein; hypothetical protein 772124..772423 Mycobacterium vanbaalenii PYR-1 4643525 YP_951574.1 CDS Mvan_0730 NC_008726.1 772522 773340 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mmc:Mmcs_0567 exodeoxyribonuclease III (xth); exodeoxyribonuclease III Xth complement(772522..773340) Mycobacterium vanbaalenii PYR-1 4643526 YP_951575.1 CDS Mvan_0731 NC_008726.1 773346 774239 R PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: mmc:Mmcs_0568 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(773346..774239) Mycobacterium vanbaalenii PYR-1 4643527 YP_951576.1 CDS def NC_008726.1 774243 774836 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(774243..774836) Mycobacterium vanbaalenii PYR-1 4643528 YP_951577.1 CDS Mvan_0733 NC_008726.1 774975 775283 D KEGG: mpa:MAP3919 hypothetical protein; Fis family transcriptional regulator 774975..775283 Mycobacterium vanbaalenii PYR-1 4643529 YP_951578.1 CDS Mvan_0734 NC_008726.1 775326 775784 D KEGG: mmc:Mmcs_0571 putative tuberculin related peptide; putative tuberculin related peptide 775326..775784 Mycobacterium vanbaalenii PYR-1 4643530 YP_951579.1 CDS Mvan_0735 NC_008726.1 775795 776502 D PFAM: superoxide dismutase, copper/zinc binding; KEGG: mmc:Mmcs_0572 superoxide dismutase, copper/zinc binding protein; superoxide dismutase, copper/zinc binding 775795..776502 Mycobacterium vanbaalenii PYR-1 4643531 YP_951580.1 CDS Mvan_0736 NC_008726.1 776483 777625 D ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 776483..777625 Mycobacterium vanbaalenii PYR-1 4643532 YP_951581.1 CDS Mvan_0737 NC_008726.1 777629 778261 D PFAM: peptidase S16, lon domain protein; KEGG: mmc:Mmcs_0575 peptidase S16, lon-like protein; peptidase S16, lon domain-containing protein 777629..778261 Mycobacterium vanbaalenii PYR-1 4643533 YP_951582.1 CDS Mvan_0738 NC_008726.1 778262 778999 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_0580 protein of unknown function Mtu_121; putative methyltransferase complement(778262..778999) Mycobacterium vanbaalenii PYR-1 4646773 YP_951583.1 CDS Mvan_0739 NC_008726.1 778980 779348 R subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G complement(778980..779348) Mycobacterium vanbaalenii PYR-1 4646774 YP_951584.1 CDS Mvan_0740 NC_008726.1 779345 779632 R subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit F complement(779345..779632) Mycobacterium vanbaalenii PYR-1 4646775 YP_951585.1 CDS Mvan_0741 NC_008726.1 779629 780168 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E complement(779629..780168) Mycobacterium vanbaalenii PYR-1 4646776 YP_951586.1 CDS Mvan_0742 NC_008726.1 780165 781781 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(780165..781781) Mycobacterium vanbaalenii PYR-1 4646777 YP_951587.1 CDS Mvan_0743 NC_008726.1 781778 782245 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(781778..782245) Mycobacterium vanbaalenii PYR-1 4646778 YP_951588.1 CDS Mvan_0744 NC_008726.1 782242 785151 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit A complement(782242..785151) Mycobacterium vanbaalenii PYR-1 4646779 YP_951589.1 CDS Mvan_0745 NC_008726.1 785240 785935 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: sco:SCO5875 putative potassium uptake protein; TrkA domain-containing protein complement(785240..785935) Mycobacterium vanbaalenii PYR-1 4646780 YP_951590.1 CDS Mvan_0746 NC_008726.1 785990 787486 D the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 785990..787486 Mycobacterium vanbaalenii PYR-1 4646781 YP_951591.1 CDS Mvan_0747 NC_008726.1 787644 789191 R PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein; transposase, IS4 family protein complement(787644..789191) Mycobacterium vanbaalenii PYR-1 4646782 YP_951592.1 CDS Mvan_0748 NC_008726.1 789315 789788 R PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_0591 protein of unknown function DUF1707; hypothetical protein complement(789315..789788) Mycobacterium vanbaalenii PYR-1 4646783 YP_951593.1 CDS Mvan_0749 NC_008726.1 789864 792092 R KEGG: mmc:Mmcs_0592 vesicle-fusing ATPase; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; vesicle-fusing ATPase complement(789864..792092) Mycobacterium vanbaalenii PYR-1 4646784 YP_951594.1 CDS Mvan_0750 NC_008726.1 792094 792945 R KEGG: mmc:Mmcs_0593 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(792094..792945) Mycobacterium vanbaalenii PYR-1 4646785 YP_951595.1 CDS Mvan_0751 NC_008726.1 792942 793643 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(792942..793643) Mycobacterium vanbaalenii PYR-1 4646786 YP_951596.1 CDS Mvan_0752 NC_008726.1 793682 794890 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: mmc:Mmcs_0595 MoeA-like, domain I and II; molybdenum cofactor synthesis domain-containing protein complement(793682..794890) Mycobacterium vanbaalenii PYR-1 4646787 YP_951597.1 CDS Mvan_0753 NC_008726.1 794890 795807 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0447c short chain dehydrogenase; short chain dehydrogenase complement(794890..795807) Mycobacterium vanbaalenii PYR-1 4646788 YP_951598.1 CDS Mvan_0754 NC_008726.1 795874 796356 D PFAM: membrane-flanked domain; KEGG: mmc:Mmcs_0597 membrane-flanked domain protein; hypothetical protein 795874..796356 Mycobacterium vanbaalenii PYR-1 4646789 YP_951599.1 CDS Mvan_0755 NC_008726.1 796353 797795 D PFAM: membrane-flanked domain; KEGG: mmc:Mmcs_0598 membrane-flanked domain protein; hypothetical protein 796353..797795 Mycobacterium vanbaalenii PYR-1 4646790 YP_951600.1 CDS Mvan_0756 NC_008726.1 797841 798656 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_0599 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase 797841..798656 Mycobacterium vanbaalenii PYR-1 4646791 YP_951601.1 CDS Mvan_0757 NC_008726.1 798657 799589 D PFAM: luciferase family protein; KEGG: mbo:Mb2917 possible oxidoreductase; luciferase family protein 798657..799589 Mycobacterium vanbaalenii PYR-1 4646792 YP_951602.1 CDS Mvan_0758 NC_008726.1 799586 800095 D KEGG: mmc:Mmcs_1592 hypothetical protein; hypothetical protein 799586..800095 Mycobacterium vanbaalenii PYR-1 4646793 YP_951603.1 CDS Mvan_0759 NC_008726.1 800100 801800 R PFAM: type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_0602 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(800100..801800) Mycobacterium vanbaalenii PYR-1 4646794 YP_951604.1 CDS Mvan_0760 NC_008726.1 801907 802443 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_0604 cupin 2, conserved barrel; cupin complement(801907..802443) Mycobacterium vanbaalenii PYR-1 4646795 YP_951605.1 CDS Mvan_0761 NC_008726.1 802542 803747 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb3569 PPE family protein; hypothetical protein 802542..803747 Mycobacterium vanbaalenii PYR-1 4646796 YP_951606.1 CDS Mvan_0762 NC_008726.1 803755 804663 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0069 short chain dehydrogenase; short chain dehydrogenase complement(803755..804663) Mycobacterium vanbaalenii PYR-1 4646797 YP_951607.1 CDS Mvan_0763 NC_008726.1 804769 805329 D PFAM: regulatory protein, TetR; KEGG: mbo:Mb0068c possible transcriptional regulatory protein (possibly TetR-family); TetR family transcriptional regulator 804769..805329 Mycobacterium vanbaalenii PYR-1 4643559 YP_951608.1 CDS groEL NC_008726.1 805511 807136 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 805511..807136 Mycobacterium vanbaalenii PYR-1 4643560 YP_951609.1 CDS Mvan_0765 NC_008726.1 807334 808026 D KEGG: mpa:MAP4270 hypothetical protein; hypothetical protein 807334..808026 Mycobacterium vanbaalenii PYR-1 4643561 YP_951610.1 CDS Mvan_0766 NC_008726.1 808111 808485 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3938c hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein complement(808111..808485) Mycobacterium vanbaalenii PYR-1 4643562 YP_951611.1 CDS Mvan_0767 NC_008726.1 808566 810293 R PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: mmc:Mmcs_0609 amidohydrolase 3; amidohydrolase 3 complement(808566..810293) Mycobacterium vanbaalenii PYR-1 4643563 YP_951612.1 CDS Mvan_0768 NC_008726.1 810316 810693 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_0610 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 810316..810693 Mycobacterium vanbaalenii PYR-1 4643564 YP_951613.1 CDS Mvan_0769 NC_008726.1 810695 811216 D KEGG: mtc:MT0459 hypothetical protein; hypothetical protein 810695..811216 Mycobacterium vanbaalenii PYR-1 4643565 YP_951614.1 CDS Mvan_0770 NC_008726.1 811261 811788 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: mmc:Mmcs_0612 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 811261..811788 Mycobacterium vanbaalenii PYR-1 4643566 YP_951615.1 CDS Mvan_0771 NC_008726.1 811790 813328 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0613 aldehyde dehydrogenase; aldehyde dehydrogenase 811790..813328 Mycobacterium vanbaalenii PYR-1 4643567 YP_951616.1 CDS Mvan_0772 NC_008726.1 813391 814302 D PFAM: protein of unknown function DUF344; KEGG: cdi:DIP2016 hypothetical protein; hypothetical protein 813391..814302 Mycobacterium vanbaalenii PYR-1 4643568 YP_951617.1 CDS Mvan_0773 NC_008726.1 814352 815206 D KEGG: mmc:Mmcs_0614 hypothetical protein; hypothetical protein 814352..815206 Mycobacterium vanbaalenii PYR-1 4643569 YP_951618.1 CDS Mvan_0774 NC_008726.1 815292 816047 R KEGG: mmc:Mmcs_2204 putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter; putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter complement(815292..816047) Mycobacterium vanbaalenii PYR-1 4643570 YP_951619.1 CDS Mvan_0775 NC_008726.1 816047 816757 R KEGG: mbo:Mb2706c probable antibiotic-transport integral membrane leucine and valine rich protein ABC transporter; putative antibiotic-transport integral membrane leucine and valine rich protein ABC transporter complement(816047..816757) Mycobacterium vanbaalenii PYR-1 4643571 YP_951620.1 CDS Mvan_0776 NC_008726.1 816754 817626 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2202 ABC transporter related; ABC transporter--like protein complement(816754..817626) Mycobacterium vanbaalenii PYR-1 4643572 YP_951621.1 CDS Mvan_0777 NC_008726.1 817756 818217 D KEGG: mmc:Mmcs_2201 transcriptional regulator, TrmB; transcriptional regulator TrmB 817756..818217 Mycobacterium vanbaalenii PYR-1 4643573 YP_951622.1 CDS Mvan_0778 NC_008726.1 818225 818824 R PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: fra:Francci3_3148 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(818225..818824) Mycobacterium vanbaalenii PYR-1 4643574 YP_951623.1 CDS Mvan_0779 NC_008726.1 818821 820323 R PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mca:MCA0724 monooxygenase, FAD-binding; FAD-binding monooxygenase complement(818821..820323) Mycobacterium vanbaalenii PYR-1 4643575 YP_951624.1 CDS Mvan_0780 NC_008726.1 820363 821265 R catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(820363..821265) Mycobacterium vanbaalenii PYR-1 4643576 YP_951625.1 CDS Mvan_0781 NC_008726.1 821268 821510 R putative transmembrane anti-sigma factor complement(821268..821510) Mycobacterium vanbaalenii PYR-1 4643577 YP_951626.1 CDS Mvan_0782 NC_008726.1 821507 822166 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pfo:Pfl_1422 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 factor complement(821507..822166) Mycobacterium vanbaalenii PYR-1 4643578 YP_951627.1 CDS Mvan_0783 NC_008726.1 822174 822662 R PFAM: protein of unknown function DUF417; KEGG: aba:Acid345_3718 protein of unknown function DUF417; hypothetical protein complement(822174..822662) Mycobacterium vanbaalenii PYR-1 4643579 YP_951628.1 CDS Mvan_0784 NC_008726.1 822736 823053 R KEGG: mpa:MAP3950c hypothetical protein; hypothetical protein complement(822736..823053) Mycobacterium vanbaalenii PYR-1 4643580 YP_951629.1 CDS Mvan_0785 NC_008726.1 823055 825085 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: mmc:Mmcs_0623 prolyl oligopeptidase; prolyl oligopeptidase complement(823055..825085) Mycobacterium vanbaalenii PYR-1 4643581 YP_951630.1 CDS Mvan_0786 NC_008726.1 825114 825401 D KEGG: lin:lin0283 ribosomal protein L12; 50S ribosomal protein L12 825114..825401 Mycobacterium vanbaalenii PYR-1 4643582 YP_951631.1 CDS Mvan_0787 NC_008726.1 825455 827287 R KEGG: mmc:Mmcs_0624 hypothetical protein; hypothetical protein complement(825455..827287) Mycobacterium vanbaalenii PYR-1 4643583 YP_951632.1 CDS Mvan_0788 NC_008726.1 827407 828456 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa30750 putative dehydrogenase; alcohol dehydrogenase 827407..828456 Mycobacterium vanbaalenii PYR-1 4643485 YP_951633.1 CDS Mvan_0789 NC_008726.1 828460 829254 D TIGRFAM: acetoin reductases; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0625 insect alcohol dehydrogenase family; acetoin reductase 828460..829254 Mycobacterium vanbaalenii PYR-1 4643486 YP_951634.1 CDS Mvan_0790 NC_008726.1 829299 830624 D PFAM: GAF domain protein; KEGG: mmc:Mmcs_0626 putative GAF sensor protein; putative GAF sensor protein 829299..830624 Mycobacterium vanbaalenii PYR-1 4643487 YP_951635.1 CDS Mvan_0791 NC_008726.1 830630 831115 D PFAM: protein of unknown function DUF779; KEGG: mmc:Mmcs_0628 protein of unknown function DUF779; hypothetical protein 830630..831115 Mycobacterium vanbaalenii PYR-1 4643488 YP_951636.1 CDS Mvan_0792 NC_008726.1 831168 831500 D KEGG: mmc:Mmcs_0629 hypothetical protein; hypothetical protein 831168..831500 Mycobacterium vanbaalenii PYR-1 4643489 YP_951637.1 CDS Mvan_0793 NC_008726.1 831493 831882 D KEGG: mmc:Mmcs_0630 hypothetical protein; hypothetical protein 831493..831882 Mycobacterium vanbaalenii PYR-1 4643490 YP_951638.1 CDS Mvan_0794 NC_008726.1 831918 833312 D E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; dihydrolipoamide dehydrogenase 831918..833312 Mycobacterium vanbaalenii PYR-1 4643491 YP_951639.1 CDS Mvan_0795 NC_008726.1 833313 833591 D KEGG: mmc:Mmcs_0632 hypothetical protein; hypothetical protein 833313..833591 Mycobacterium vanbaalenii PYR-1 4643492 YP_951640.1 CDS Mvan_0796 NC_008726.1 833667 834752 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_0356 diguanylate cyclase; diguanylate cyclase 833667..834752 Mycobacterium vanbaalenii PYR-1 4643493 YP_951641.1 CDS Mvan_0797 NC_008726.1 834733 835683 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0801 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(834733..835683) Mycobacterium vanbaalenii PYR-1 4643494 YP_951642.1 CDS Mvan_0798 NC_008726.1 835743 836285 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_0633 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(835743..836285) Mycobacterium vanbaalenii PYR-1 4643495 YP_951643.1 CDS Mvan_0799 NC_008726.1 836282 837709 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: mmc:Mmcs_0634 transcriptional regulator, XRE family; hypothetical protein complement(836282..837709) Mycobacterium vanbaalenii PYR-1 4643496 YP_951644.1 CDS Mvan_0800 NC_008726.1 837788 838603 D PFAM: acyl-ACP thioesterase; KEGG: mmc:Mmcs_0635 acyl-ACP thioesterase; acyl-ACP thioesterase 837788..838603 Mycobacterium vanbaalenii PYR-1 4643497 YP_951645.1 CDS Mvan_0801 NC_008726.1 838869 840155 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mmc:Mmcs_0636 isocitrate lyase; isocitrate lyase 838869..840155 Mycobacterium vanbaalenii PYR-1 4643498 YP_951646.1 CDS Mvan_0802 NC_008726.1 840465 841319 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 840465..841319 Mycobacterium vanbaalenii PYR-1 4643499 YP_951647.1 CDS Mvan_0803 NC_008726.1 841526 842401 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP3963 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 841526..842401 Mycobacterium vanbaalenii PYR-1 4643500 YP_951648.1 CDS Mvan_0804 NC_008726.1 842428 843303 R PFAM: protein of unknown function DUF344; KEGG: mmc:Mmcs_0639 protein of unknown function DUF344; hypothetical protein complement(842428..843303) Mycobacterium vanbaalenii PYR-1 4643501 YP_951649.1 CDS Mvan_0805 NC_008726.1 843504 844187 R PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: mmc:Mmcs_0640 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(843504..844187) Mycobacterium vanbaalenii PYR-1 4643502 YP_951650.1 CDS Mvan_0806 NC_008726.1 844294 845637 D PFAM: protein of unknown function DUF445; KEGG: mmc:Mmcs_0641 protein of unknown function DUF445; hypothetical protein 844294..845637 Mycobacterium vanbaalenii PYR-1 4643503 YP_951651.1 CDS Mvan_0807 NC_008726.1 845730 846260 D PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_0642 transcriptional regulator, XRE family; XRE family transcriptional regulator 845730..846260 Mycobacterium vanbaalenii PYR-1 4643504 YP_951652.1 CDS Mvan_0808 NC_008726.1 846253 846903 D KEGG: mmc:Mmcs_0643 hypothetical protein; hypothetical protein 846253..846903 Mycobacterium vanbaalenii PYR-1 4643505 YP_951653.1 CDS Mvan_0809 NC_008726.1 846967 847248 D KEGG: mle:ML2453 conserved membrane protein; hypothetical protein 846967..847248 Mycobacterium vanbaalenii PYR-1 4643506 YP_951654.1 CDS Mvan_0810 NC_008726.1 847248 847658 D KEGG: mmc:Mmcs_0645 hypothetical protein; hypothetical protein 847248..847658 Mycobacterium vanbaalenii PYR-1 4643507 YP_951655.1 CDS Mvan_0811 NC_008726.1 847658 848335 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 847658..848335 Mycobacterium vanbaalenii PYR-1 4643508 YP_951656.1 CDS Mvan_0812 NC_008726.1 848339 849211 R KEGG: mmc:Mmcs_0647 hypothetical protein; hypothetical protein complement(848339..849211) Mycobacterium vanbaalenii PYR-1 4643509 YP_951657.1 CDS Mvan_0813 NC_008726.1 849250 850137 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmc:Mmcs_0648 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(849250..850137) Mycobacterium vanbaalenii PYR-1 4646674 YP_951658.1 CDS Mvan_0814 NC_008726.1 850151 851308 R PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: syw:SYNW1412 putative agmatine ureohydrolase; arginase/agmatinase/formiminoglutamase complement(850151..851308) Mycobacterium vanbaalenii PYR-1 4646675 YP_951659.1 CDS Mvan_0815 NC_008726.1 851640 853163 D PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_0649 Na+/solute symporter; Na+/solute symporter 851640..853163 Mycobacterium vanbaalenii PYR-1 4646676 YP_951660.1 CDS Mvan_0816 NC_008726.1 853173 854237 D KEGG: mbo:Mb3759 hypothetical protein; hypothetical protein 853173..854237 Mycobacterium vanbaalenii PYR-1 4646677 YP_951661.1 CDS Mvan_0817 NC_008726.1 854440 855144 D KEGG: mmc:Mmcs_3793 hypothetical protein; hypothetical protein 854440..855144 Mycobacterium vanbaalenii PYR-1 4646678 YP_951662.1 CDS Mvan_0818 NC_008726.1 855141 855947 D KEGG: mmc:Mmcs_3792 hypothetical protein; hypothetical protein 855141..855947 Mycobacterium vanbaalenii PYR-1 4646679 YP_951663.1 CDS Mvan_0819 NC_008726.1 855944 856555 D PFAM: cytochrome c oxidase, subunit III; KEGG: bpm:BURPS1710b_A2238 cytochrome c oxidase, subunit III family protein; cytochrome c oxidase subunit III 855944..856555 Mycobacterium vanbaalenii PYR-1 4646680 YP_951664.1 CDS Mvan_0820 NC_008726.1 856559 856837 D KEGG: mmc:Mmcs_4375 hypothetical protein; hypothetical protein 856559..856837 Mycobacterium vanbaalenii PYR-1 4646681 YP_951665.1 CDS Mvan_0821 NC_008726.1 856844 857632 R KEGG: mmc:Mmcs_0650 hypothetical protein; hypothetical protein complement(856844..857632) Mycobacterium vanbaalenii PYR-1 4646682 YP_951666.1 CDS Mvan_0822 NC_008726.1 857654 858160 R KEGG: mmc:Mmcs_0652 hypothetical protein; hypothetical protein complement(857654..858160) Mycobacterium vanbaalenii PYR-1 4646683 YP_951667.1 CDS murB NC_008726.1 858199 859236 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 858199..859236 Mycobacterium vanbaalenii PYR-1 4646684 YP_951668.1 CDS Mvan_0824 NC_008726.1 859252 860550 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_0654 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 859252..860550 Mycobacterium vanbaalenii PYR-1 4646685 YP_951669.1 CDS Mvan_0825 NC_008726.1 860626 861384 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0655 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(860626..861384) Mycobacterium vanbaalenii PYR-1 4646686 YP_951670.1 CDS Mvan_0826 NC_008726.1 861610 862923 D PFAM: ROK family protein; KEGG: mmc:Mmcs_0656 ROK domain containing protein; ROK family protein 861610..862923 Mycobacterium vanbaalenii PYR-1 4646687 YP_951671.1 CDS Mvan_0827 NC_008726.1 862960 864312 D PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0657 glycosyl transferase, group 1; group 1 glycosyl transferase 862960..864312 Mycobacterium vanbaalenii PYR-1 4646688 YP_951672.1 CDS Mvan_0828 NC_008726.1 864309 864839 D KEGG: mpa:MAP3980 hypothetical protein; hypothetical protein 864309..864839 Mycobacterium vanbaalenii PYR-1 4646689 YP_951673.1 CDS Mvan_0829 NC_008726.1 864852 865604 D KEGG: mmc:Mmcs_0659 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 864852..865604 Mycobacterium vanbaalenii PYR-1 4646690 YP_951674.1 CDS Mvan_0830 NC_008726.1 865743 866948 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_0660 histidine kinase; histidine kinase 865743..866948 Mycobacterium vanbaalenii PYR-1 4646691 YP_951675.1 CDS Mvan_0831 NC_008726.1 866956 867642 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_0661 two component transcriptional regulator, winged helix family; two component transcriptional regulator 866956..867642 Mycobacterium vanbaalenii PYR-1 4646692 YP_951676.1 CDS Mvan_0832 NC_008726.1 867699 868490 R KEGG: mmc:Mmcs_0663 hypothetical protein; hypothetical protein complement(867699..868490) Mycobacterium vanbaalenii PYR-1 4646693 YP_951677.1 CDS Mvan_0833 NC_008726.1 868515 869582 D PFAM: Ppx/GppA phosphatase; KEGG: mmc:Mmcs_0664 Ppx/GppA phosphatase; Ppx/GppA phosphatase 868515..869582 Mycobacterium vanbaalenii PYR-1 4646694 YP_951678.1 CDS Mvan_0834 NC_008726.1 869609 870742 D KEGG: mmc:Mmcs_0665 hypothetical protein; hypothetical protein 869609..870742 Mycobacterium vanbaalenii PYR-1 4646695 YP_951679.1 CDS Mvan_0835 NC_008726.1 870758 871603 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mmc:Mmcs_0666 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 870758..871603 Mycobacterium vanbaalenii PYR-1 4646696 YP_951680.1 CDS Mvan_0836 NC_008726.1 871618 872466 D KEGG: mmc:Mmcs_0667 hypothetical protein; hypothetical protein 871618..872466 Mycobacterium vanbaalenii PYR-1 4646697 YP_951681.1 CDS Mvan_0837 NC_008726.1 872490 873410 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 872490..873410 Mycobacterium vanbaalenii PYR-1 4646170 YP_951682.1 CDS Mvan_0838 NC_008726.1 873550 873822 D TIGRFAM: DNA binding domain, excisionase family; KEGG: mmc:Mmcs_0669 excisionase/Xis, DNA-binding protein; DNA binding domain-containing protein 873550..873822 Mycobacterium vanbaalenii PYR-1 4646171 YP_951683.1 CDS Mvan_0839 NC_008726.1 873954 874055 D PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein; hypothetical protein 873954..874055 Mycobacterium vanbaalenii PYR-1 4646172 YP_951684.1 CDS Mvan_0840 NC_008726.1 874085 875191 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_0671 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 874085..875191 Mycobacterium vanbaalenii PYR-1 4646173 YP_951685.1 CDS Mvan_0841 NC_008726.1 875242 876312 D PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_0672 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 875242..876312 Mycobacterium vanbaalenii PYR-1 4646174 YP_951686.1 CDS Mvan_0842 NC_008726.1 876322 876864 R KEGG: mmc:Mmcs_0673 MaoC-like dehydratase; MaoC-like dehydratase complement(876322..876864) Mycobacterium vanbaalenii PYR-1 4646175 YP_951687.1 CDS Mvan_0843 NC_008726.1 876978 877883 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_0674 HAD-superfamily subfamily IB, PSPase-like protein; HAD family hydrolase complement(876978..877883) Mycobacterium vanbaalenii PYR-1 4646176 YP_951688.1 CDS hemA NC_008726.1 878324 879694 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 878324..879694 Mycobacterium vanbaalenii PYR-1 4646177 YP_951689.1 CDS hemC NC_008726.1 879720 880658 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 879720..880658 Mycobacterium vanbaalenii PYR-1 4646178 YP_951690.1 CDS Mvan_0846 NC_008726.1 880655 882370 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: mmc:Mmcs_0678 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 880655..882370 Mycobacterium vanbaalenii PYR-1 4646179 YP_951691.1 CDS Mvan_0847 NC_008726.1 882448 883428 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 882448..883428 Mycobacterium vanbaalenii PYR-1 4646180 YP_951692.1 CDS Mvan_0848 NC_008726.1 883425 883838 D KEGG: mmc:Mmcs_0680 hypothetical protein; hypothetical protein 883425..883838 Mycobacterium vanbaalenii PYR-1 4646181 YP_951693.1 CDS Mvan_0849 NC_008726.1 883859 884314 D KEGG: mmc:Mmcs_0681 hypothetical protein; hypothetical protein 883859..884314 Mycobacterium vanbaalenii PYR-1 4646182 YP_951694.1 CDS Mvan_0850 NC_008726.1 884311 884820 D KEGG: mmc:Mmcs_0682 putative conserved transmembrane protein; putative transmembrane protein 884311..884820 Mycobacterium vanbaalenii PYR-1 4646183 YP_951695.1 CDS Mvan_0851 NC_008726.1 884817 885068 D KEGG: mmc:Mmcs_0683 putative transmembrane protein; putative transmembrane protein 884817..885068 Mycobacterium vanbaalenii PYR-1 4646184 YP_951696.1 CDS Mvan_0852 NC_008726.1 885275 886135 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mhu:Mhun_2368 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 885275..886135 Mycobacterium vanbaalenii PYR-1 4646185 YP_951697.1 CDS Mvan_0853 NC_008726.1 886138 886590 D KEGG: mmc:Mmcs_0684 hypothetical protein; hypothetical protein 886138..886590 Mycobacterium vanbaalenii PYR-1 4646186 YP_951698.1 CDS Mvan_0854 NC_008726.1 886578 887507 D KEGG: mmc:Mmcs_0685 hypothetical protein; hypothetical protein 886578..887507 Mycobacterium vanbaalenii PYR-1 4646187 YP_951699.1 CDS Mvan_0855 NC_008726.1 887494 888084 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0686 transcriptional regulator, TetR family; TetR family transcriptional regulator 887494..888084 Mycobacterium vanbaalenii PYR-1 4646188 YP_951700.1 CDS Mvan_0856 NC_008726.1 888098 888397 D KEGG: mmc:Mmcs_0687 hypothetical protein; hypothetical protein 888098..888397 Mycobacterium vanbaalenii PYR-1 4646189 YP_951701.1 CDS Mvan_0857 NC_008726.1 888422 888925 D KEGG: mmc:Mmcs_0688 hypothetical protein; hypothetical protein 888422..888925 Mycobacterium vanbaalenii PYR-1 4646190 YP_951702.1 CDS Mvan_0858 NC_008726.1 888922 890295 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_1717 cytochrome P450; cytochrome P450 888922..890295 Mycobacterium vanbaalenii PYR-1 4646191 YP_951703.1 CDS Mvan_0859 NC_008726.1 890296 890676 R PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mbo:Mb0536c hypothetical protein; hypothetical protein complement(890296..890676) Mycobacterium vanbaalenii PYR-1 4646192 YP_951704.1 CDS Mvan_0860 NC_008726.1 890701 890991 R hypothetical protein complement(890701..890991) Mycobacterium vanbaalenii PYR-1 4646193 YP_951705.1 CDS Mvan_0861 NC_008726.1 891405 892907 R PFAM: helix-turn-helix, Fis-type; purine catabolism PurC domain protein; KEGG: sma:SAV6502 regulatory protein; transcriptional regulator CdaR complement(891405..892907) Mycobacterium vanbaalenii PYR-1 4646194 YP_951706.1 CDS Mvan_0862 NC_008726.1 892982 894505 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: mmc:Mmcs_4185 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 892982..894505 Mycobacterium vanbaalenii PYR-1 4643534 YP_951707.1 CDS Mvan_0863 NC_008726.1 894502 896031 D PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cya:CYA_1640 amidohydrolase family protein; amidohydrolase 894502..896031 Mycobacterium vanbaalenii PYR-1 4643535 YP_951708.1 CDS Mvan_0864 NC_008726.1 896086 897384 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 896086..897384 Mycobacterium vanbaalenii PYR-1 4643536 YP_951709.1 CDS Mvan_0865 NC_008726.1 897381 897983 D PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_0691 phosphoglycerate mutase; phosphoglycerate mutase 897381..897983 Mycobacterium vanbaalenii PYR-1 4643537 YP_951710.1 CDS Mvan_0866 NC_008726.1 897980 898582 D PFAM: Redoxin domain protein; KEGG: mmc:Mmcs_0692 redoxin; redoxin domain-containing protein 897980..898582 Mycobacterium vanbaalenii PYR-1 4643538 YP_951711.1 CDS Mvan_0867 NC_008726.1 898579 899373 D PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mmc:Mmcs_0693 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein 898579..899373 Mycobacterium vanbaalenii PYR-1 4643539 YP_951712.1 CDS Mvan_0868 NC_008726.1 899373 901061 D PFAM: ResB family protein; KEGG: mmc:Mmcs_0694 ResB-like protein; ResB family protein 899373..901061 Mycobacterium vanbaalenii PYR-1 4643540 YP_951713.1 CDS Mvan_0869 NC_008726.1 901058 902041 D PFAM: cytochrome c assembly protein; KEGG: mmc:Mmcs_0695 cytochrome c assembly protein; cytochrome c assembly protein 901058..902041 Mycobacterium vanbaalenii PYR-1 4643541 YP_951714.1 CDS Mvan_0870 NC_008726.1 902091 903179 D KEGG: mmc:Mmcs_0696 hypothetical protein; hypothetical protein 902091..903179 Mycobacterium vanbaalenii PYR-1 4643542 YP_951715.1 CDS Mvan_0871 NC_008726.1 903207 903386 R KEGG: mtc:MT0553 hypothetical protein; hypothetical protein complement(903207..903386) Mycobacterium vanbaalenii PYR-1 4643543 YP_951716.1 CDS Mvan_0872 NC_008726.1 903436 903750 D KEGG: mmc:Mmcs_0697 hypothetical protein; hypothetical protein 903436..903750 Mycobacterium vanbaalenii PYR-1 4643544 YP_951717.1 CDS Mvan_0873 NC_008726.1 903827 904240 D PFAM: protein of unknown function DUF1486; KEGG: mmc:Mmcs_0699 protein of unknown function DUF1486; hypothetical protein 903827..904240 Mycobacterium vanbaalenii PYR-1 4643545 YP_951718.1 CDS Mvan_0874 NC_008726.1 904244 904957 R KEGG: mmc:Mmcs_5160 hypothetical protein; hypothetical protein complement(904244..904957) Mycobacterium vanbaalenii PYR-1 4643546 YP_951719.1 CDS Mvan_0875 NC_008726.1 904954 905862 R KEGG: mmc:Mmcs_5161 hypothetical protein; hypothetical protein complement(904954..905862) Mycobacterium vanbaalenii PYR-1 4643547 YP_951720.1 CDS Mvan_0876 NC_008726.1 905859 906791 R KEGG: mmc:Mmcs_5162 hypothetical protein; hypothetical protein complement(905859..906791) Mycobacterium vanbaalenii PYR-1 4643548 YP_951721.1 CDS Mvan_0877 NC_008726.1 906803 907276 R KEGG: mmc:Mmcs_5163 hypothetical protein; hypothetical protein complement(906803..907276) Mycobacterium vanbaalenii PYR-1 4643549 YP_951722.1 CDS Mvan_0878 NC_008726.1 907266 908126 R PFAM: protein of unknown function DUF58; KEGG: mmc:Mmcs_5164 protein of unknown function DUF58; hypothetical protein complement(907266..908126) Mycobacterium vanbaalenii PYR-1 4643550 YP_951723.1 CDS Mvan_0879 NC_008726.1 908140 909144 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_5165 ATPase associated with various cellular activities, AAA_3; ATPase complement(908140..909144) Mycobacterium vanbaalenii PYR-1 4643551 YP_951724.1 CDS Mvan_0880 NC_008726.1 909259 910128 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(909259..910128) Mycobacterium vanbaalenii PYR-1 4643552 YP_951725.1 CDS Mvan_0881 NC_008726.1 910388 911164 D Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 910388..911164 Mycobacterium vanbaalenii PYR-1 4643553 YP_951726.1 CDS Mvan_0882 NC_008726.1 911161 912207 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mmc:Mmcs_0704 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 911161..912207 Mycobacterium vanbaalenii PYR-1 4643554 YP_951727.1 CDS Mvan_0883 NC_008726.1 912291 913421 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_0706 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 912291..913421 Mycobacterium vanbaalenii PYR-1 4643555 YP_951728.1 CDS Mvan_0884 NC_008726.1 913492 914487 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_0708 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(913492..914487) Mycobacterium vanbaalenii PYR-1 4643556 YP_951729.1 CDS Mvan_0885 NC_008726.1 914501 915175 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_0709 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(914501..915175) Mycobacterium vanbaalenii PYR-1 4643557 YP_951730.1 CDS Mvan_0886 NC_008726.1 915288 915944 D PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_0710 glycosyl transferase, family 2; glycosyl transferase family protein 915288..915944 Mycobacterium vanbaalenii PYR-1 4643558 YP_951731.1 CDS Mvan_0887 NC_008726.1 915941 916606 D KEGG: mmc:Mmcs_0711 hypothetical protein; hypothetical protein 915941..916606 Mycobacterium vanbaalenii PYR-1 4643609 YP_951732.1 CDS Mvan_0888 NC_008726.1 916606 917232 D PFAM: Methyltransferase type 12; KEGG: mmc:Mmcs_0712 methyltransferase type 12; type 12 methyltransferase 916606..917232 Mycobacterium vanbaalenii PYR-1 4643610 YP_951733.1 CDS Mvan_0889 NC_008726.1 917232 918335 D PFAM: oxidoreductase, molybdopterin binding; KEGG: fra:Francci3_0983 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase 917232..918335 Mycobacterium vanbaalenii PYR-1 4643611 YP_951734.1 CDS Mvan_0890 NC_008726.1 918332 918799 D KEGG: fra:Francci3_0982 hypothetical protein; hypothetical protein 918332..918799 Mycobacterium vanbaalenii PYR-1 4643612 YP_951735.1 CDS Mvan_0891 NC_008726.1 918725 920080 R KEGG: mmc:Mmcs_0715 putative conserved integral membrane protein; putative integral membrane protein complement(918725..920080) Mycobacterium vanbaalenii PYR-1 4643613 YP_951736.1 CDS Mvan_0892 NC_008726.1 920127 920483 R hypothetical protein complement(920127..920483) Mycobacterium vanbaalenii PYR-1 4643614 YP_951737.1 CDS Mvan_0893 NC_008726.1 920473 921153 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_C0259 isochorismatase hydrolase family protein; isochorismatase hydrolase complement(920473..921153) Mycobacterium vanbaalenii PYR-1 4643615 YP_951738.1 CDS Mvan_0894 NC_008726.1 921414 922214 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa22660 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(921414..922214) Mycobacterium vanbaalenii PYR-1 4643616 YP_951739.1 CDS Mvan_0895 NC_008726.1 922211 922939 R PFAM: regulatory protein, TetR; KEGG: nha:Nham_3517 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(922211..922939) Mycobacterium vanbaalenii PYR-1 4643617 YP_951740.1 CDS Mvan_0896 NC_008726.1 923088 923363 D KEGG: sco:SCO7618 transcriptional regulator; transcriptional regulator 923088..923363 Mycobacterium vanbaalenii PYR-1 4643618 YP_951741.1 CDS Mvan_0897 NC_008726.1 923367 924146 D PFAM: regulatory proteins, IclR; KEGG: sco:SCO7618 transcriptional regulator; regulatory proteins IclR 923367..924146 Mycobacterium vanbaalenii PYR-1 4643619 YP_951742.1 CDS Mvan_0898 NC_008726.1 924285 925898 D PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_C0592 putative AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 924285..925898 Mycobacterium vanbaalenii PYR-1 4643620 YP_951743.1 CDS Mvan_0899 NC_008726.1 925895 927064 D KEGG: sma:SAV3807 lipid-transfer protein; lipid-transfer protein 925895..927064 Mycobacterium vanbaalenii PYR-1 4643621 YP_951744.1 CDS Mvan_0900 NC_008726.1 927103 928326 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 927103..928326 Mycobacterium vanbaalenii PYR-1 4643622 YP_951745.1 CDS Mvan_0901 NC_008726.1 928442 929653 D PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0606 hypothetical protein; amidohydrolase 2 928442..929653 Mycobacterium vanbaalenii PYR-1 4643623 YP_951746.1 CDS Mvan_0902 NC_008726.1 929656 930078 D PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0582 hypothetical protein; hypothetical protein 929656..930078 Mycobacterium vanbaalenii PYR-1 4643624 YP_951747.1 CDS Mvan_0903 NC_008726.1 930168 930596 D PFAM: Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein; limonene-1,2-epoxide hydrolase 930168..930596 Mycobacterium vanbaalenii PYR-1 4643625 YP_951748.1 CDS Mvan_0904 NC_008726.1 930783 932228 D PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa46630 putative aldehyde dehydrogenase; aldehyde dehydrogenase 930783..932228 Mycobacterium vanbaalenii PYR-1 4643626 YP_951749.1 CDS Mvan_0905 NC_008726.1 932263 933906 D PFAM: AMP-dependent synthetase and ligase; KEGG: gka:GK1318 medium-chain fatty acid-CoA ligase; AMP-dependent synthetase and ligase 932263..933906 Mycobacterium vanbaalenii PYR-1 4643627 YP_951750.1 CDS Mvan_0906 NC_008726.1 933949 935091 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4078 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 933949..935091 Mycobacterium vanbaalenii PYR-1 4643628 YP_951751.1 CDS Mvan_0907 NC_008726.1 935179 936501 D KEGG: mpa:MAP0779 hypothetical protein; hypothetical protein 935179..936501 Mycobacterium vanbaalenii PYR-1 4643629 YP_951752.1 CDS Mvan_0908 NC_008726.1 936696 938021 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP3508 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 936696..938021 Mycobacterium vanbaalenii PYR-1 4643630 YP_951753.1 CDS Mvan_0909 NC_008726.1 938018 938359 D PFAM: ferredoxin; KEGG: bba:Bd0372 hypothetical protein; ferredoxin 938018..938359 Mycobacterium vanbaalenii PYR-1 4643631 YP_951754.1 CDS Mvan_0910 NC_008726.1 938415 939302 D TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP4197c hypothetical protein; putative methyltransferase 938415..939302 Mycobacterium vanbaalenii PYR-1 4643632 YP_951755.1 CDS Mvan_0911 NC_008726.1 939423 940397 D PFAM: dehydrogenase, E1 component; KEGG: tte:TTE0688 Thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit; pyruvate dehydrogenase 939423..940397 Mycobacterium vanbaalenii PYR-1 4643633 YP_951756.1 CDS Mvan_0912 NC_008726.1 940429 941454 D PFAM: Transketolase, central region; Transketolase domain protein; KEGG: tte:TTE0689 Thiamine pyrophosphate-dependent dehydrogenases, E1 component beta subunit; transketolase, central region 940429..941454 Mycobacterium vanbaalenii PYR-1 4645269 YP_951757.1 CDS Mvan_0913 NC_008726.1 941456 941689 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sit:TM1040_1077 dihydrolipoamide acetyltransferase, long form; biotin/lipoyl attachment domain-containing protein 941456..941689 Mycobacterium vanbaalenii PYR-1 4645270 YP_951758.1 CDS Mvan_0914 NC_008726.1 941696 942616 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 941696..942616 Mycobacterium vanbaalenii PYR-1 4645271 YP_951759.1 CDS Mvan_0915 NC_008726.1 942698 944857 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit; 3-hydroxyacyl-CoA dehydrogenase complement(942698..944857) Mycobacterium vanbaalenii PYR-1 4645272 YP_951760.1 CDS Mvan_0916 NC_008726.1 944869 946080 R KEGG: sco:SCO6731 acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(944869..946080) Mycobacterium vanbaalenii PYR-1 4645273 YP_951761.1 CDS Mvan_0917 NC_008726.1 946272 946790 R KEGG: mtc:MT2026 hypothetical protein; hypothetical protein complement(946272..946790) Mycobacterium vanbaalenii PYR-1 4645274 YP_951762.1 CDS Mvan_0918 NC_008726.1 946787 947344 R KEGG: mtc:MT2024.1 hypothetical protein; hypothetical protein complement(946787..947344) Mycobacterium vanbaalenii PYR-1 4645275 YP_951763.1 CDS Mvan_0919 NC_008726.1 947325 947927 R KEGG: mmc:Mmcs_1530 hypothetical protein; hypothetical protein complement(947325..947927) Mycobacterium vanbaalenii PYR-1 4645276 YP_951764.1 CDS Mvan_0920 NC_008726.1 948256 949023 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140; hypothetical protein 948256..949023 Mycobacterium vanbaalenii PYR-1 4645277 YP_951765.1 CDS Mvan_0921 NC_008726.1 949020 949874 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1523 protein of unknown function DUF140; hypothetical protein 949020..949874 Mycobacterium vanbaalenii PYR-1 4645278 YP_951766.1 CDS Mvan_0922 NC_008726.1 949880 951331 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1654 mammalian cell entry; virulence factor Mce family protein 949880..951331 Mycobacterium vanbaalenii PYR-1 4645279 YP_951767.1 CDS Mvan_0923 NC_008726.1 951381 952412 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1655 mammalian cell entry; virulence factor Mce family protein 951381..952412 Mycobacterium vanbaalenii PYR-1 4645280 YP_951768.1 CDS Mvan_0924 NC_008726.1 952409 953725 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1526 mammalian cell entry; virulence factor Mce family protein 952409..953725 Mycobacterium vanbaalenii PYR-1 4645281 YP_951769.1 CDS Mvan_0925 NC_008726.1 953722 955005 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2021 virulence factor mce family protein; virulence factor Mce family protein 953722..955005 Mycobacterium vanbaalenii PYR-1 4645282 YP_951770.1 CDS Mvan_0926 NC_008726.1 955002 956135 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1658 mammalian cell entry; virulence factor Mce family protein 955002..956135 Mycobacterium vanbaalenii PYR-1 4645283 YP_951771.1 CDS Mvan_0927 NC_008726.1 956137 957624 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry; virulence factor Mce family protein 956137..957624 Mycobacterium vanbaalenii PYR-1 4645284 YP_951772.1 CDS Mvan_0928 NC_008726.1 958450 961029 D PFAM: Carboxymuconolactone decarboxylase; KEGG: mtu:Rv1068c PE-PGRS family protein; carboxymuconolactone decarboxylase 958450..961029 Mycobacterium vanbaalenii PYR-1 4645285 YP_951773.1 CDS Mvan_0929 NC_008726.1 961125 961742 R PFAM: regulatory protein, TetR; KEGG: pfl:PFL_1156 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(961125..961742) Mycobacterium vanbaalenii PYR-1 4645286 YP_951774.1 CDS Mvan_0930 NC_008726.1 961831 962724 D SMART: helix-turn-helix domain protein; KEGG: sco:SCO0110 DNA-binding protein; helix-turn-helix domain-containing protein 961831..962724 Mycobacterium vanbaalenii PYR-1 4645287 YP_951775.1 CDS Mvan_0931 NC_008726.1 962931 963659 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4868 transcriptional regulator, GntR family; GntR family transcriptional regulator 962931..963659 Mycobacterium vanbaalenii PYR-1 4645288 YP_951776.1 CDS Mvan_0932 NC_008726.1 963748 965301 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: mmc:Mmcs_4869 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 963748..965301 Mycobacterium vanbaalenii PYR-1 4645289 YP_951777.1 CDS Mvan_0933 NC_008726.1 965298 966002 D PFAM: Asp/Glu racemase; KEGG: bxe:Bxe_A1925 putative hydantoin racemase; Asp/Glu racemase 965298..966002 Mycobacterium vanbaalenii PYR-1 4645290 YP_951778.1 CDS Mvan_0934 NC_008726.1 965993 966919 R PFAM: polysaccharide deacetylase; KEGG: nfa:nfa52360 hypothetical protein; polysaccharide deacetylase complement(965993..966919) Mycobacterium vanbaalenii PYR-1 4645291 YP_951779.1 CDS Mvan_0935 NC_008726.1 966916 967878 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(966916..967878) Mycobacterium vanbaalenii PYR-1 4645292 YP_951780.1 CDS Mvan_0936 NC_008726.1 968176 968790 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_0724 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(968176..968790) Mycobacterium vanbaalenii PYR-1 4645293 YP_951781.1 CDS Mvan_0937 NC_008726.1 968834 969871 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_0726 AMP-dependent synthetase and ligase; O-succinylbenzoic acid--CoA ligase complement(968834..969871) Mycobacterium vanbaalenii PYR-1 4645844 YP_951782.1 CDS Mvan_0938 NC_008726.1 969970 970296 R KEGG: mbo:Mb0557c hypothetical protein; hypothetical protein complement(969970..970296) Mycobacterium vanbaalenii PYR-1 4645845 YP_951783.1 CDS Mvan_0939 NC_008726.1 970509 971792 D PFAM: phosphate transporter; KEGG: mmc:Mmcs_0728 phosphate transporter; phosphate transporter 970509..971792 Mycobacterium vanbaalenii PYR-1 4645846 YP_951784.1 CDS Mvan_0940 NC_008726.1 971807 972094 D KEGG: mmc:Mmcs_0729 hypothetical protein; hypothetical protein 971807..972094 Mycobacterium vanbaalenii PYR-1 4645847 YP_951785.1 CDS Mvan_0941 NC_008726.1 972105 972404 D KEGG: mmc:Mmcs_0730 hypothetical protein; hypothetical protein 972105..972404 Mycobacterium vanbaalenii PYR-1 4645848 YP_951786.1 CDS Mvan_0942 NC_008726.1 972645 973031 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP4042c hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(972645..973031) Mycobacterium vanbaalenii PYR-1 4645849 YP_951787.1 CDS Mvan_0943 NC_008726.1 973054 974589 R PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll2948 acyl-CoA synthase; AMP-dependent synthetase and ligase complement(973054..974589) Mycobacterium vanbaalenii PYR-1 4645850 YP_951788.1 CDS Mvan_0944 NC_008726.1 974596 975480 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0732 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(974596..975480) Mycobacterium vanbaalenii PYR-1 4645851 YP_951789.1 CDS Mvan_0945 NC_008726.1 975569 976555 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV7438 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(975569..976555) Mycobacterium vanbaalenii PYR-1 4645852 YP_951790.1 CDS Mvan_0946 NC_008726.1 976629 977552 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mlo:mlr1976 probable transcriptional regulator; helix-turn-helix domain-containing protein 976629..977552 Mycobacterium vanbaalenii PYR-1 4645853 YP_951791.1 CDS Mvan_0947 NC_008726.1 977601 978524 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(977601..978524) Mycobacterium vanbaalenii PYR-1 4645854 YP_951792.1 CDS Mvan_0948 NC_008726.1 978528 978977 R KEGG: mmc:Mmcs_0736 hypothetical protein; hypothetical protein complement(978528..978977) Mycobacterium vanbaalenii PYR-1 4645855 YP_951793.1 CDS Mvan_0949 NC_008726.1 978988 979695 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_0737 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase complement(978988..979695) Mycobacterium vanbaalenii PYR-1 4645856 YP_951794.1 CDS Mvan_0950 NC_008726.1 979729 980979 R KEGG: mmc:Mmcs_0344 hypothetical protein; hypothetical protein complement(979729..980979) Mycobacterium vanbaalenii PYR-1 4645857 YP_951795.1 CDS Mvan_0951 NC_008726.1 981002 982222 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0340 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(981002..982222) Mycobacterium vanbaalenii PYR-1 4645858 YP_951796.1 CDS Mvan_0952 NC_008726.1 982272 982949 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_0339 regulatory protein GntR, HTH; GntR family transcriptional regulator 982272..982949 Mycobacterium vanbaalenii PYR-1 4645859 YP_951797.1 CDS Mvan_0953 NC_008726.1 983012 984610 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(983012..984610) Mycobacterium vanbaalenii PYR-1 4645860 YP_951798.1 CDS Mvan_0954 NC_008726.1 984893 986122 R KEGG: nfa:nfa30280 hypothetical protein; hypothetical protein complement(984893..986122) Mycobacterium vanbaalenii PYR-1 4645861 YP_951799.1 CDS Mvan_0955 NC_008726.1 986170 986826 D PFAM: regulatory protein, TetR; KEGG: bja:blr4990 transcriptional regulatory protein; TetR family transcriptional regulator 986170..986826 Mycobacterium vanbaalenii PYR-1 4645862 YP_951800.1 CDS Mvan_0956 NC_008726.1 986823 987119 D KEGG: mmc:Mmcs_5144 hypothetical protein; hypothetical protein 986823..987119 Mycobacterium vanbaalenii PYR-1 4645863 YP_951801.1 CDS Mvan_0957 NC_008726.1 987388 988233 D PFAM: protein of unknown function DUF140; KEGG: mpa:MAP1849 hypothetical protein; hypothetical protein 987388..988233 Mycobacterium vanbaalenii PYR-1 4645864 YP_951802.1 CDS Mvan_0958 NC_008726.1 988237 989094 D PFAM: protein of unknown function DUF140; KEGG: mpa:MAP1850 hypothetical protein; hypothetical protein 988237..989094 Mycobacterium vanbaalenii PYR-1 4645865 YP_951803.1 CDS Mvan_0959 NC_008726.1 989095 990684 D PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1851 hypothetical protein; hypothetical protein 989095..990684 Mycobacterium vanbaalenii PYR-1 4645866 YP_951804.1 CDS Mvan_0960 NC_008726.1 990681 991736 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1852 hypothetical protein; virulence factor Mce family protein 990681..991736 Mycobacterium vanbaalenii PYR-1 4645867 YP_951805.1 CDS Mvan_0961 NC_008726.1 991729 992766 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP0110 hypothetical protein; virulence factor Mce family protein 991729..992766 Mycobacterium vanbaalenii PYR-1 4645868 YP_951806.1 CDS Mvan_0962 NC_008726.1 992766 993884 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP0111 hypothetical protein; virulence factor Mce family protein 992766..993884 Mycobacterium vanbaalenii PYR-1 4647941 YP_951807.1 CDS Mvan_0963 NC_008726.1 993884 995104 D PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1855 hypothetical protein; hypothetical protein 993884..995104 Mycobacterium vanbaalenii PYR-1 4647942 YP_951808.1 CDS Mvan_0964 NC_008726.1 995101 996351 D PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1856 hypothetical protein; hypothetical protein 995101..996351 Mycobacterium vanbaalenii PYR-1 4647943 YP_951809.1 CDS Mvan_0965 NC_008726.1 996390 997031 D KEGG: mpa:MAP1857 hypothetical protein; hypothetical protein 996390..997031 Mycobacterium vanbaalenii PYR-1 4647944 YP_951810.1 CDS Mvan_0966 NC_008726.1 997042 997821 D KEGG: mpa:MAP0115 hypothetical protein; hypothetical protein 997042..997821 Mycobacterium vanbaalenii PYR-1 4647945 YP_951811.1 CDS Mvan_0967 NC_008726.1 997824 998405 D KEGG: mpa:MAP0091c hypothetical protein; hypothetical protein 997824..998405 Mycobacterium vanbaalenii PYR-1 4647946 YP_951812.1 CDS Mvan_0968 NC_008726.1 998617 999576 D KEGG: mmc:Mmcs_0745 hypothetical protein; hypothetical protein 998617..999576 Mycobacterium vanbaalenii PYR-1 4647947 YP_951813.1 CDS Mvan_0969 NC_008726.1 999584 1000171 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0746 transcriptional regulator, TetR family; TetR family transcriptional regulator 999584..1000171 Mycobacterium vanbaalenii PYR-1 4647948 YP_951814.1 CDS Mvan_0970 NC_008726.1 1000236 1001798 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_0743 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1000236..1001798 Mycobacterium vanbaalenii PYR-1 4647949 YP_951815.1 CDS Mvan_0971 NC_008726.1 1001824 1002864 D catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 1001824..1002864 Mycobacterium vanbaalenii PYR-1 4647950 YP_951816.1 CDS Mvan_0972 NC_008726.1 1002873 1003883 D PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_0747 transcriptional regulator, AraC family; AraC family transcriptional regulator 1002873..1003883 Mycobacterium vanbaalenii PYR-1 4647951 YP_951817.1 CDS Mvan_0973 NC_008726.1 1003901 1004650 D PFAM: ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_0748 ThiJ/PfpI; ThiJ/PfpI domain-containing protein 1003901..1004650 Mycobacterium vanbaalenii PYR-1 4647952 YP_951818.1 CDS Mvan_0974 NC_008726.1 1004718 1005500 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0750 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1004718..1005500 Mycobacterium vanbaalenii PYR-1 4647953 YP_951819.1 CDS Mvan_0975 NC_008726.1 1005500 1007149 D SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1005500..1007149 Mycobacterium vanbaalenii PYR-1 4647954 YP_951820.1 CDS Mvan_0976 NC_008726.1 1007146 1007658 D KEGG: mmc:Mmcs_0752 putative conserved transmembrane protein; putative transmembrane protein 1007146..1007658 Mycobacterium vanbaalenii PYR-1 4647955 YP_951821.1 CDS Mvan_0977 NC_008726.1 1007655 1008344 R KEGG: mmc:Mmcs_0755 hypothetical protein; hypothetical protein complement(1007655..1008344) Mycobacterium vanbaalenii PYR-1 4647956 YP_951822.1 CDS Mvan_0978 NC_008726.1 1008463 1009590 D PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0761 glycosyl transferase, group 1; group 1 glycosyl transferase 1008463..1009590 Mycobacterium vanbaalenii PYR-1 4647957 YP_951823.1 CDS Mvan_0979 NC_008726.1 1009677 1010510 D PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_5232 O-methyltransferase-like protein; O-methyltransferase domain-containing protein 1009677..1010510 Mycobacterium vanbaalenii PYR-1 4647958 YP_951824.1 CDS Mvan_0980 NC_008726.1 1010526 1011002 D KEGG: mmc:Mmcs_0458 hypothetical protein; hypothetical protein 1010526..1011002 Mycobacterium vanbaalenii PYR-1 4647959 YP_951825.1 CDS Mvan_0981 NC_008726.1 1011016 1011201 R hypothetical protein complement(1011016..1011201) Mycobacterium vanbaalenii PYR-1 4647960 YP_951826.1 CDS Mvan_0982 NC_008726.1 1011211 1012068 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0762 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1011211..1012068) Mycobacterium vanbaalenii PYR-1 4647961 YP_951827.1 CDS ubiE NC_008726.1 1012128 1012814 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1012128..1012814 Mycobacterium vanbaalenii PYR-1 4647962 YP_951828.1 CDS Mvan_0984 NC_008726.1 1012892 1013446 R hypothetical protein complement(1012892..1013446) Mycobacterium vanbaalenii PYR-1 4647963 YP_951829.1 CDS Mvan_0985 NC_008726.1 1013551 1013892 R KEGG: mmc:Mmcs_2715 hypothetical protein; hypothetical protein complement(1013551..1013892) Mycobacterium vanbaalenii PYR-1 4647964 YP_951830.1 CDS Mvan_0986 NC_008726.1 1014089 1015495 R KEGG: mmc:Mmcs_2648 hypothetical protein; hypothetical protein complement(1014089..1015495) Mycobacterium vanbaalenii PYR-1 4647965 YP_951831.1 CDS Mvan_0987 NC_008726.1 1015774 1016832 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL0307 lipase/esterase; alpha/beta hydrolase domain-containing protein 1015774..1016832 Mycobacterium vanbaalenii PYR-1 4645771 YP_951832.1 CDS Mvan_0988 NC_008726.1 1016804 1018390 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_4505 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1016804..1018390) Mycobacterium vanbaalenii PYR-1 4645772 YP_951833.1 CDS Mvan_0989 NC_008726.1 1018469 1019068 D PFAM: regulatory protein, TetR; KEGG: mbo:Mb3860c transcriptional regulatory protein (probably TetR-family); TetR family transcriptional regulator 1018469..1019068 Mycobacterium vanbaalenii PYR-1 4645773 YP_951834.1 CDS Mvan_0990 NC_008726.1 1019061 1019555 R KEGG: mmc:Mmcs_0769 hypothetical protein; hypothetical protein complement(1019061..1019555) Mycobacterium vanbaalenii PYR-1 4645774 YP_951835.1 CDS Mvan_0991 NC_008726.1 1019599 1020855 R TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0770 geranylgeranyl reductase; geranylgeranyl reductase complement(1019599..1020855) Mycobacterium vanbaalenii PYR-1 4645775 YP_951836.1 CDS Mvan_0992 NC_008726.1 1020895 1021884 D PFAM: Polyprenyl synthetase; KEGG: mmc:Mmcs_0771 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase 1020895..1021884 Mycobacterium vanbaalenii PYR-1 4645776 YP_951837.1 CDS Mvan_0993 NC_008726.1 1021963 1022853 D putative metalloprotease; heat shock protein HtpX 1021963..1022853 Mycobacterium vanbaalenii PYR-1 4645777 YP_951838.1 CDS Mvan_0994 NC_008726.1 1022900 1023430 D KEGG: mmc:Mmcs_0773 hypothetical protein; hypothetical protein 1022900..1023430 Mycobacterium vanbaalenii PYR-1 4645778 YP_951839.1 CDS Mvan_0995 NC_008726.1 1023437 1024462 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1023437..1024462) Mycobacterium vanbaalenii PYR-1 4645779 YP_951840.1 CDS Mvan_0996 NC_008726.1 1024573 1025055 D KEGG: mmc:Mmcs_0775 protein of unknown function DUF1023; hypothetical protein 1024573..1025055 Mycobacterium vanbaalenii PYR-1 4645780 YP_951841.1 CDS Mvan_0997 NC_008726.1 1025046 1025537 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(1025046..1025537) Mycobacterium vanbaalenii PYR-1 4645781 YP_951842.1 CDS Mvan_0998 NC_008726.1 1025855 1026913 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mmc:Mmcs_4734 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(1025855..1026913) Mycobacterium vanbaalenii PYR-1 4645783 YP_951843.1 CDS Mvan_0999 NC_008726.1 1027476 1029596 D PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: hch:HCH_02966 polyketide synthase modules and related protein; AMP-dependent synthetase and ligase 1027476..1029596 Mycobacterium vanbaalenii PYR-1 4645784 YP_951844.1 CDS Mvan_1000 NC_008726.1 1029593 1037026 D TIGRFAM: amino acid adenylation domain; PFAM: beta-ketoacyl synthase; AMP-dependent synthetase and ligase; acyl transferase domain protein; condensation domain protein; phosphopantetheine-binding; KEGG: mpa:MAP2230c hypothetical protein; amino acid adenylation domain-containing protein 1029593..1037026 Mycobacterium vanbaalenii PYR-1 4645785 YP_951845.1 CDS Mvan_1001 NC_008726.1 1037042 1038184 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:bll1070 probable dioxygenase; Rieske (2Fe-2S) domain-containing protein 1037042..1038184 Mycobacterium vanbaalenii PYR-1 4645786 YP_951846.1 CDS Mvan_1002 NC_008726.1 1038203 1038538 D PFAM: Sterol-binding domain protein; KEGG: gka:GK2783 hypothetical protein; sterol-binding domain-containing protein 1038203..1038538 Mycobacterium vanbaalenii PYR-1 4645787 YP_951847.1 CDS Mvan_1003 NC_008726.1 1038535 1049625 D PFAM: beta-ketoacyl synthase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR; KEGG: mpa:MAP2230c hypothetical protein; beta-ketoacyl synthase 1038535..1049625 Mycobacterium vanbaalenii PYR-1 4645788 YP_951848.1 CDS Mvan_1004 NC_008726.1 1049639 1050331 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa42490 putative ABC transporter ATP-binding protein; ABC transporter--like protein 1049639..1050331 Mycobacterium vanbaalenii PYR-1 4645789 YP_951849.1 CDS Mvan_1005 NC_008726.1 1050328 1052811 D PFAM: protein of unknown function DUF214; KEGG: nfa:nfa42500 putative transporter permease; hypothetical protein 1050328..1052811 Mycobacterium vanbaalenii PYR-1 4645790 YP_951850.1 CDS Mvan_1006 NC_008726.1 1052827 1054143 D PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: reu:Reut_C6210 acetyl xylan esterase; hypothetical protein 1052827..1054143 Mycobacterium vanbaalenii PYR-1 4645791 YP_951851.1 CDS Mvan_1007 NC_008726.1 1054247 1054669 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein; hypothetical protein 1054247..1054669 Mycobacterium vanbaalenii PYR-1 4645792 YP_951852.1 CDS Mvan_1008 NC_008726.1 1054670 1055521 R PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_4850 acyl-CoA thioesterase; acyl-CoA thioesterase complement(1054670..1055521) Mycobacterium vanbaalenii PYR-1 4645793 YP_951853.1 CDS Mvan_1009 NC_008726.1 1055640 1058048 D TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: tcx:Tcr_0105 VCBS; putative outer membrane adhesin-like protein 1055640..1058048 Mycobacterium vanbaalenii PYR-1 4645794 YP_951854.1 CDS Mvan_1010 NC_008726.1 1058300 1059328 R KEGG: mmc:Mmcs_0779 PKD domain containing protein; PKD domain-containing protein complement(1058300..1059328) Mycobacterium vanbaalenii PYR-1 4644231 YP_951855.1 CDS Mvan_1011 NC_008726.1 1060426 1061709 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mtu:Rv0159c PE family protein; hypothetical protein 1060426..1061709 Mycobacterium vanbaalenii PYR-1 4644232 YP_951856.1 CDS Mvan_1012 NC_008726.1 1061820 1062557 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1038 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1061820..1062557 Mycobacterium vanbaalenii PYR-1 4644233 YP_951857.1 CDS Mvan_1013 NC_008726.1 1062687 1063601 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1039 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 1062687..1063601 Mycobacterium vanbaalenii PYR-1 4644234 YP_951858.1 CDS Mvan_1014 NC_008726.1 1063609 1064508 R PFAM: protein of unknown function DUF88; KEGG: mmc:Mmcs_0898 protein of unknown function DUF88; hypothetical protein complement(1063609..1064508) Mycobacterium vanbaalenii PYR-1 4644235 YP_951859.1 CDS Mvan_1015 NC_008726.1 1064664 1065827 D KEGG: mmc:Mmcs_0413 hypothetical protein; hypothetical protein 1064664..1065827 Mycobacterium vanbaalenii PYR-1 4644236 YP_951860.1 CDS Mvan_1016 NC_008726.1 1065898 1066863 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rha:RHA1_ro02790 probable phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(1065898..1066863) Mycobacterium vanbaalenii PYR-1 4644237 YP_951861.1 CDS Mvan_1017 NC_008726.1 1066865 1068202 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: nfa:nfa35070 putative glucarate dehydratase; glucarate dehydratase complement(1066865..1068202) Mycobacterium vanbaalenii PYR-1 4644238 YP_951862.1 CDS Mvan_1018 NC_008726.1 1068224 1069024 R PFAM: regulatory proteins, IclR; KEGG: sma:SAV5579 IclR-family transcriptional regulator; regulatory proteins IclR complement(1068224..1069024) Mycobacterium vanbaalenii PYR-1 4644239 YP_951863.1 CDS Mvan_1019 NC_008726.1 1069035 1069757 R PFAM: protein of unknown function DUF81; KEGG: cef:CE1187 hypothetical protein; hypothetical protein complement(1069035..1069757) Mycobacterium vanbaalenii PYR-1 4644240 YP_951864.1 CDS Mvan_1020 NC_008726.1 1069919 1070923 R KEGG: pac:PPA2156 putative peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1069919..1070923) Mycobacterium vanbaalenii PYR-1 4644241 YP_951865.1 CDS Mvan_1021 NC_008726.1 1070916 1071983 R KEGG: sma:SAV3146 putative peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1070916..1071983) Mycobacterium vanbaalenii PYR-1 4644242 YP_951866.1 CDS Mvan_1022 NC_008726.1 1071995 1072984 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03930 ABC dipeptide transporter, permease component; binding-protein-dependent transport system inner membrane protein complement(1071995..1072984) Mycobacterium vanbaalenii PYR-1 4644243 YP_951867.1 CDS Mvan_1023 NC_008726.1 1073005 1073934 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1437 probable ABC transporter permease; binding-protein-dependent transport systems inner membrane component complement(1073005..1073934) Mycobacterium vanbaalenii PYR-1 4644244 YP_951868.1 CDS Mvan_1024 NC_008726.1 1073963 1075537 R PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein complement(1073963..1075537) Mycobacterium vanbaalenii PYR-1 4644245 YP_951869.1 CDS Mvan_1025 NC_008726.1 1075847 1076821 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mpa:MAP0129 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase 1075847..1076821 Mycobacterium vanbaalenii PYR-1 4644246 YP_951870.1 CDS Mvan_1026 NC_008726.1 1077123 1078658 D PFAM: Alkaline phosphatase; KEGG: tfu:Tfu_1673 phosphodiesterase/alkaline phosphatase D; alkaline phosphatase 1077123..1078658 Mycobacterium vanbaalenii PYR-1 4644247 YP_951871.1 CDS Mvan_1027 NC_008726.1 1078729 1079628 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rha:RHA1_ro03793 probable transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1078729..1079628) Mycobacterium vanbaalenii PYR-1 4644248 YP_951872.1 CDS Mvan_1028 NC_008726.1 1079628 1080101 R KEGG: mmc:Mmcs_0797 hypothetical protein; hypothetical protein complement(1079628..1080101) Mycobacterium vanbaalenii PYR-1 4644249 YP_951873.1 CDS Mvan_1029 NC_008726.1 1080142 1081401 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: ani:AN0613.2 hypothetical protein; mandelate racemase/muconate lactonizing protein complement(1080142..1081401) Mycobacterium vanbaalenii PYR-1 4644250 YP_951874.1 CDS Mvan_1030 NC_008726.1 1081405 1082346 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(1081405..1082346) Mycobacterium vanbaalenii PYR-1 4644251 YP_951875.1 CDS Mvan_1031 NC_008726.1 1082378 1083976 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4783 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1082378..1083976) Mycobacterium vanbaalenii PYR-1 4644252 YP_951876.1 CDS Mvan_1032 NC_008726.1 1084084 1084767 R PFAM: helix-turn-helix, HxlR type; KEGG: sma:SAV520 transcriptional regulator; HxlR family transcriptional regulator complement(1084084..1084767) Mycobacterium vanbaalenii PYR-1 4644253 YP_951877.1 CDS Mvan_1033 NC_008726.1 1085427 1087187 D PFAM: protein kinase; extracellular solute-binding protein, family 3; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0782 serine/threonine protein kinase; protein kinase 1085427..1087187 Mycobacterium vanbaalenii PYR-1 4644254 YP_951878.1 CDS Mvan_1034 NC_008726.1 1087262 1087816 D KEGG: mmc:Mmcs_3398 CsbD-like protein; CsbD-like protein 1087262..1087816 Mycobacterium vanbaalenii PYR-1 4645345 YP_951879.1 CDS Mvan_1035 NC_008726.1 1087843 1088514 D KEGG: mmc:Mmcs_3399 hypothetical protein; hypothetical protein 1087843..1088514 Mycobacterium vanbaalenii PYR-1 4645346 YP_951880.1 CDS Mvan_1036 NC_008726.1 1088518 1088757 D KEGG: nfa:nfa48420 hypothetical protein; hypothetical protein 1088518..1088757 Mycobacterium vanbaalenii PYR-1 4645347 YP_951881.1 CDS Mvan_1037 NC_008726.1 1088754 1089200 R PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mpa:MAP0130 hypothetical protein; putative anti-sigma regulatory factor complement(1088754..1089200) Mycobacterium vanbaalenii PYR-1 4645348 YP_951882.1 CDS Mvan_1038 NC_008726.1 1089257 1090636 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_0785 cytochrome P450; cytochrome P450 1089257..1090636 Mycobacterium vanbaalenii PYR-1 4645349 YP_951883.1 CDS Mvan_1039 NC_008726.1 1090924 1091412 D KEGG: mpa:MAP1936c hypothetical protein; hypothetical protein 1090924..1091412 Mycobacterium vanbaalenii PYR-1 4645350 YP_951884.1 CDS Mvan_1040 NC_008726.1 1091535 1091738 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mmc:Mmcs_2295 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1091535..1091738 Mycobacterium vanbaalenii PYR-1 4645351 YP_951885.1 CDS Mvan_1041 NC_008726.1 1092142 1094478 D PFAM: peptidase S15; KEGG: sco:SCO2723 putative ABC transporter ATP-binding protein; peptidase S15 1092142..1094478 Mycobacterium vanbaalenii PYR-1 4645352 YP_951886.1 CDS Mvan_1042 NC_008726.1 1094953 1096089 D PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0790 glycosyl transferase, group 1; group 1 glycosyl transferase 1094953..1096089 Mycobacterium vanbaalenii PYR-1 4645353 YP_951887.1 CDS Mvan_1043 NC_008726.1 1096113 1096916 D PFAM: transglutaminase domain protein; KEGG: mmc:Mmcs_1197 transglutaminase-like protein; transglutaminase domain-containing protein 1096113..1096916 Mycobacterium vanbaalenii PYR-1 4645354 YP_951888.1 CDS Mvan_1044 NC_008726.1 1096920 1098092 R PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mmc:Mmcs_0788 alanine dehydrogenase/PNT-like protein; NAD(P) transhydrogenase subunit alpha complement(1096920..1098092) Mycobacterium vanbaalenii PYR-1 4645355 YP_951889.1 CDS Mvan_1045 NC_008726.1 1098363 1099568 D PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_0402 fatty acid desaturase; fatty acid desaturase 1098363..1099568 Mycobacterium vanbaalenii PYR-1 4645356 YP_951890.1 CDS Mvan_1046 NC_008726.1 1099670 1099831 D KEGG: mmc:Mmcs_0791 hypothetical protein; hypothetical protein 1099670..1099831 Mycobacterium vanbaalenii PYR-1 4645357 YP_951891.1 CDS Mvan_1047 NC_008726.1 1099886 1100083 D hypothetical protein 1099886..1100083 Mycobacterium vanbaalenii PYR-1 4645358 YP_951892.1 CDS Mvan_1048 NC_008726.1 1100257 1100880 D PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_5241 ANTAR; ANTAR domain-containing protein 1100257..1100880 Mycobacterium vanbaalenii PYR-1 4645359 YP_951893.1 CDS Mvan_1049 NC_008726.1 1100918 1101676 D PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_5240 response regulator receiver and ANTAR domain protein; putative GAF sensor protein 1100918..1101676 Mycobacterium vanbaalenii PYR-1 4645360 YP_951894.1 CDS Mvan_1050 NC_008726.1 1101673 1102473 R PFAM: GAF domain protein; ANTAR domain protein; KEGG: mpa:MAP3540c hypothetical protein; response regulator receiver/ANTAR domain-containing protein complement(1101673..1102473) Mycobacterium vanbaalenii PYR-1 4645361 YP_951895.1 CDS Mvan_1051 NC_008726.1 1102496 1104130 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1102496..1104130) Mycobacterium vanbaalenii PYR-1 4645362 YP_951896.1 CDS Mvan_1052 NC_008726.1 1104926 1106041 D PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0790 glycosyl transferase, group 1; group 1 glycosyl transferase 1104926..1106041 Mycobacterium vanbaalenii PYR-1 4645363 YP_951897.1 CDS Mvan_1053 NC_008726.1 1106038 1107060 D KEGG: fal:FRAAL1701 hypothetical protein; putative glycosyltransferase; putative glycosyltransferase 1106038..1107060 Mycobacterium vanbaalenii PYR-1 4645364 YP_951898.1 CDS Mvan_1054 NC_008726.1 1107057 1108547 D PFAM: glycosidase, PH1107-related; KEGG: fal:FRAAL1702 hypothetical protein; glycosidase 1107057..1108547 Mycobacterium vanbaalenii PYR-1 4645365 YP_951899.1 CDS Mvan_1055 NC_008726.1 1108694 1109803 D PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_0402 fatty acid desaturase; fatty acid desaturase 1108694..1109803 Mycobacterium vanbaalenii PYR-1 4645366 YP_951900.1 CDS Mvan_1056 NC_008726.1 1109849 1110325 R KEGG: mmc:Mmcs_5070 putative secreted protein; hypothetical protein complement(1109849..1110325) Mycobacterium vanbaalenii PYR-1 4645367 YP_951901.1 CDS Mvan_1057 NC_008726.1 1110322 1113213 R TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein; transporter complement(1110322..1113213) Mycobacterium vanbaalenii PYR-1 4645368 YP_951902.1 CDS Mvan_1058 NC_008726.1 1113210 1113635 R PFAM: Mycobacterium membrane family protein; KEGG: mbo:Mb0696c possible conserved membrane protein MmpS5; hypothetical protein complement(1113210..1113635) Mycobacterium vanbaalenii PYR-1 4645369 YP_951903.1 CDS Mvan_1059 NC_008726.1 1113846 1114499 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa44560 putative transcriptional regulator; TetR family transcriptional regulator 1113846..1114499 Mycobacterium vanbaalenii PYR-1 4648444 YP_951904.1 CDS Mvan_1060 NC_008726.1 1114556 1115239 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa44560 putative transcriptional regulator; TetR family transcriptional regulator 1114556..1115239 Mycobacterium vanbaalenii PYR-1 4648445 YP_951905.1 CDS Mvan_1061 NC_008726.1 1115433 1116395 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO0235 short chain dehydrogenase; short chain dehydrogenase complement(1115433..1116395) Mycobacterium vanbaalenii PYR-1 4648446 YP_951906.1 CDS Mvan_1062 NC_008726.1 1116416 1117285 R PFAM: helix-turn-helix domain protein; KEGG: sco:SCO0233 DNA-binding protein; XRE family transcriptional regulator complement(1116416..1117285) Mycobacterium vanbaalenii PYR-1 4648447 YP_951907.1 CDS Mvan_1063 NC_008726.1 1117580 1118023 D hypothetical protein 1117580..1118023 Mycobacterium vanbaalenii PYR-1 4648448 YP_951908.1 CDS Mvan_1064 NC_008726.1 1118011 1118787 D hypothetical protein 1118011..1118787 Mycobacterium vanbaalenii PYR-1 4648449 YP_951909.1 CDS Mvan_1065 NC_008726.1 1118908 1120278 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_0858 protein of unknown function UPF0089; hypothetical protein 1118908..1120278 Mycobacterium vanbaalenii PYR-1 4648450 YP_951910.1 CDS Mvan_1066 NC_008726.1 1120356 1121816 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_3400 serine/threonine protein kinase; protein kinase 1120356..1121816 Mycobacterium vanbaalenii PYR-1 4648451 YP_951911.1 CDS Mvan_1067 NC_008726.1 1122005 1124332 D PFAM: peptidase S15; KEGG: sma:SAV5344 putative ABC transporter ATP-binding protein; peptidase S15 1122005..1124332 Mycobacterium vanbaalenii PYR-1 4648452 YP_951912.1 CDS Mvan_1068 NC_008726.1 1124429 1126915 R PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; PASTA domain containing protein; KEGG: mmc:Mmcs_1483 glycosyl transferase, family 51; glycosyl transferase family protein complement(1124429..1126915) Mycobacterium vanbaalenii PYR-1 4648453 YP_951913.1 CDS Mvan_1069 NC_008726.1 1127012 1127248 R KEGG: rha:RHA1_ro02952 hypothetical protein; hypothetical protein complement(1127012..1127248) Mycobacterium vanbaalenii PYR-1 4648454 YP_951914.1 CDS Mvan_1070 NC_008726.1 1127362 1127829 D KEGG: mpa:MAP1744 hypothetical protein; hypothetical protein 1127362..1127829 Mycobacterium vanbaalenii PYR-1 4648455 YP_951915.1 CDS Mvan_1071 NC_008726.1 1127967 1128878 D PFAM: band 7 protein; KEGG: mmc:Mmcs_1484 band 7 protein; hypothetical protein 1127967..1128878 Mycobacterium vanbaalenii PYR-1 4648456 YP_951916.1 CDS Mvan_1072 NC_008726.1 1128955 1130187 D PFAM: beta-lactamase; KEGG: rpd:RPD_0253 beta-lactamase; beta-lactamase 1128955..1130187 Mycobacterium vanbaalenii PYR-1 4648457 YP_951917.1 CDS Mvan_1073 NC_008726.1 1130231 1131706 R KEGG: sma:SAV6990 hypothetical protein; hypothetical protein complement(1130231..1131706) Mycobacterium vanbaalenii PYR-1 4648458 YP_951918.1 CDS Mvan_1074 NC_008726.1 1131923 1132369 D KEGG: mmc:Mmcs_4958 hypothetical protein; hypothetical protein 1131923..1132369 Mycobacterium vanbaalenii PYR-1 4648459 YP_951919.1 CDS Mvan_1075 NC_008726.1 1132488 1133105 D PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_4347 FHA domain containing protein; FHA domain-containing protein 1132488..1133105 Mycobacterium vanbaalenii PYR-1 4648460 YP_951920.1 CDS Mvan_1076 NC_008726.1 1133098 1136079 R PFAM: protein kinase; Kelch repeat-containing protein; Kelch repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_4348 serine/threonine protein kinase; protein kinase complement(1133098..1136079) Mycobacterium vanbaalenii PYR-1 4648461 YP_951921.1 CDS Mvan_1077 NC_008726.1 1136163 1138331 R KEGG: mmc:Mmcs_0799 hypothetical protein; hypothetical protein complement(1136163..1138331) Mycobacterium vanbaalenii PYR-1 4648462 YP_951922.1 CDS Mvan_1078 NC_008726.1 1138325 1139398 R KEGG: mmc:Mmcs_0800 hypothetical protein; hypothetical protein complement(1138325..1139398) Mycobacterium vanbaalenii PYR-1 4648463 YP_951923.1 CDS Mvan_1079 NC_008726.1 1139833 1140684 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0403 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1139833..1140684 Mycobacterium vanbaalenii PYR-1 4648464 YP_951924.1 CDS Mvan_1080 NC_008726.1 1140686 1142431 D Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 1140686..1142431 Mycobacterium vanbaalenii PYR-1 4648465 YP_951925.1 CDS Mvan_1082 NC_008726.1 1143370 1144158 R KEGG: mmc:Mmcs_0035 hypothetical protein; hypothetical protein complement(1143370..1144158) Mycobacterium vanbaalenii PYR-1 4648467 YP_951926.1 CDS Mvan_1083 NC_008726.1 1144405 1145925 R PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro01977 possible antibiotic efflux protein; major facilitator superfamily transporter complement(1144405..1145925) Mycobacterium vanbaalenii PYR-1 4648468 YP_951927.1 CDS Mvan_1084 NC_008726.1 1145922 1146929 R PFAM: alpha/beta hydrolase fold; KEGG: nmu:Nmul_A1582 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1145922..1146929) Mycobacterium vanbaalenii PYR-1 4648494 YP_951928.1 CDS Mvan_1085 NC_008726.1 1147069 1147317 D hypothetical protein 1147069..1147317 Mycobacterium vanbaalenii PYR-1 4648495 YP_951929.1 CDS Mvan_1086 NC_008726.1 1147620 1147919 D hypothetical protein 1147620..1147919 Mycobacterium vanbaalenii PYR-1 4648496 YP_951930.1 CDS Mvan_1087 NC_008726.1 1148047 1148541 R PFAM: DNA mismatch endonuclease vsr; KEGG: nfa:nfa2330 putative DNA mismatch endonuclease; DNA mismatch endonuclease vsr complement(1148047..1148541) Mycobacterium vanbaalenii PYR-1 4648497 YP_951931.1 CDS Mvan_1088 NC_008726.1 1148572 1153473 R KEGG: fal:FRAAL2645 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain; yype IV secretory pathway VirB4 components-like protein complement(1148572..1153473) Mycobacterium vanbaalenii PYR-1 4648498 YP_951932.1 CDS Mvan_1089 NC_008726.1 1153470 1154765 R hypothetical protein complement(1153470..1154765) Mycobacterium vanbaalenii PYR-1 4648499 YP_951933.1 CDS Mvan_1090 NC_008726.1 1155333 1155650 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 1155333..1155650 Mycobacterium vanbaalenii PYR-1 4648500 YP_951934.1 CDS Mvan_1091 NC_008726.1 1155647 1156540 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 1155647..1156540 Mycobacterium vanbaalenii PYR-1 4648501 YP_951935.1 CDS Mvan_1092 NC_008726.1 1156521 1158200 R KEGG: son:SO1461 protein kinase, putative; hypothetical protein complement(1156521..1158200) Mycobacterium vanbaalenii PYR-1 4648502 YP_951936.1 CDS Mvan_1093 NC_008726.1 1158197 1159357 R KEGG: ngo:NGO0365 site-specific DNA-methyltransferase M.NgoVII; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(1158197..1159357) Mycobacterium vanbaalenii PYR-1 4648503 YP_951937.1 CDS Mvan_1094 NC_008726.1 1159668 1160525 R PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5589 integrase, catalytic region; integrase catalytic subunit complement(1159668..1160525) Mycobacterium vanbaalenii PYR-1 4648504 YP_951938.1 CDS Mvan_1095 NC_008726.1 1160522 1160830 R PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3179 transposase IS3/IS911; transposase IS3/IS911 family protein complement(1160522..1160830) Mycobacterium vanbaalenii PYR-1 4648505 YP_951939.1 CDS Mvan_1096 NC_008726.1 1160936 1163830 R PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sme:SMc02152 putative helicase protein; helicase domain-containing protein complement(1160936..1163830) Mycobacterium vanbaalenii PYR-1 4648506 YP_951940.1 CDS Mvan_1097 NC_008726.1 1163893 1164831 D hypothetical protein 1163893..1164831 Mycobacterium vanbaalenii PYR-1 4648507 YP_951941.1 CDS Mvan_1098 NC_008726.1 1164835 1167588 D PFAM: SMC domain protein; KEGG: tfu:Tfu_0999 hypothetical protein; SMC domain-containing protein 1164835..1167588 Mycobacterium vanbaalenii PYR-1 4648508 YP_951942.1 CDS Mvan_1099 NC_008726.1 1167590 1168912 R KEGG: mmc:Mmcs_0820 hypothetical protein; hypothetical protein complement(1167590..1168912) Mycobacterium vanbaalenii PYR-1 4648509 YP_951943.1 CDS Mvan_1100 NC_008726.1 1169171 1170622 R PFAM: Dual specificity protein phosphatase; ADP-ribosylation/Crystallin J1; KEGG: mmc:Mmcs_0831 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 complement(1169171..1170622) Mycobacterium vanbaalenii PYR-1 4648510 YP_951944.1 CDS Mvan_1101 NC_008726.1 1170666 1171355 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_0832 NUDIX hydrolase; NUDIX hydrolase 1170666..1171355 Mycobacterium vanbaalenii PYR-1 4648511 YP_951945.1 CDS Mvan_1102 NC_008726.1 1171641 1172060 D hypothetical protein 1171641..1172060 Mycobacterium vanbaalenii PYR-1 4648512 YP_951946.1 CDS Mvan_1103 NC_008726.1 1172430 1173482 D PFAM: metallophosphoesterase; KEGG: hch:HCH_04712 diadenosine tetraphosphatase and related serine/threonine protein phosphatase; metallophosphoesterase 1172430..1173482 Mycobacterium vanbaalenii PYR-1 4648513 YP_951947.1 CDS Mvan_1104 NC_008726.1 1173562 1173939 R hypothetical protein complement(1173562..1173939) Mycobacterium vanbaalenii PYR-1 4648514 YP_951948.1 CDS Mvan_1105 NC_008726.1 1173936 1175390 R PFAM: ADP-ribosylation/Crystallin J1; KEGG: mmc:Mmcs_0831 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 complement(1173936..1175390) Mycobacterium vanbaalenii PYR-1 4648515 YP_951949.1 CDS Mvan_1106 NC_008726.1 1175493 1176002 D hypothetical protein 1175493..1176002 Mycobacterium vanbaalenii PYR-1 4648516 YP_951950.1 CDS Mvan_1107 NC_008726.1 1175999 1179364 D KEGG: bpe:BP1345 hypothetical protein; hypothetical protein 1175999..1179364 Mycobacterium vanbaalenii PYR-1 4648517 YP_951951.1 CDS Mvan_1108 NC_008726.1 1179366 1180133 D hypothetical protein 1179366..1180133 Mycobacterium vanbaalenii PYR-1 4648518 YP_951952.1 CDS Mvan_1109 NC_008726.1 1180390 1180965 D hypothetical protein 1180390..1180965 Mycobacterium vanbaalenii PYR-1 4648544 YP_951953.1 CDS Mvan_1110 NC_008726.1 1181210 1181545 D PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_0845 transposase IS3/IS911; transposase IS3/IS911 family protein 1181210..1181545 Mycobacterium vanbaalenii PYR-1 4648545 YP_951954.1 CDS Mvan_1111 NC_008726.1 1181575 1182396 D PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region; integrase catalytic subunit 1181575..1182396 Mycobacterium vanbaalenii PYR-1 4648546 YP_951955.1 CDS Mvan_1112 NC_008726.1 1182633 1183079 D KEGG: mmc:Mmcs_2595 integrase, catalytic region; integrase, catalytic region 1182633..1183079 Mycobacterium vanbaalenii PYR-1 4648547 YP_951956.1 CDS Mvan_1113 NC_008726.1 1183143 1184237 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase; phage integrase family protein 1183143..1184237 Mycobacterium vanbaalenii PYR-1 4648548 YP_951957.1 CDS Mvan_1114 NC_008726.1 1184203 1186116 D PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein 1184203..1186116 Mycobacterium vanbaalenii PYR-1 4648549 YP_951958.1 CDS Mvan_1115 NC_008726.1 1186113 1186412 D hypothetical protein 1186113..1186412 Mycobacterium vanbaalenii PYR-1 4648550 YP_951959.1 CDS Mvan_1117 NC_008726.1 1186809 1187189 R KEGG: mbo:Mb3166c hypothetical protein; hypothetical protein complement(1186809..1187189) Mycobacterium vanbaalenii PYR-1 4648552 YP_951960.1 CDS Mvan_1118 NC_008726.1 1187189 1188454 R KEGG: nfa:nfa15610 hypothetical protein; hypothetical protein complement(1187189..1188454) Mycobacterium vanbaalenii PYR-1 4648553 YP_951961.1 CDS Mvan_1119 NC_008726.1 1188451 1188735 R KEGG: mpa:MAP3999c hypothetical protein; hypothetical protein complement(1188451..1188735) Mycobacterium vanbaalenii PYR-1 4648554 YP_951962.1 CDS Mvan_1120 NC_008726.1 1188735 1189046 R PFAM: protein of unknown function DUF909; KEGG: nfa:nfa15620 hypothetical protein; Fis family transcriptional regulator complement(1188735..1189046) Mycobacterium vanbaalenii PYR-1 4648555 YP_951963.1 CDS Mvan_1121 NC_008726.1 1189271 1190269 R hypothetical protein complement(1189271..1190269) Mycobacterium vanbaalenii PYR-1 4648556 YP_951964.1 CDS Mvan_1122 NC_008726.1 1190670 1191455 D KEGG: mmc:Mmcs_1478 hypothetical protein; hypothetical protein 1190670..1191455 Mycobacterium vanbaalenii PYR-1 4648557 YP_951965.1 CDS Mvan_1123 NC_008726.1 1191452 1192150 D PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1479 DsbA oxidoreductase; DSBA oxidoreductase 1191452..1192150 Mycobacterium vanbaalenii PYR-1 4648558 YP_951966.1 CDS Mvan_1124 NC_008726.1 1192306 1194054 D PFAM: VanW family protein; KEGG: nfa:nfa54560 hypothetical protein; VanW family protein 1192306..1194054 Mycobacterium vanbaalenii PYR-1 4648559 YP_951967.1 CDS Mvan_1125 NC_008726.1 1194097 1195221 D KEGG: mmc:Mmcs_0846 hypothetical protein; hypothetical protein 1194097..1195221 Mycobacterium vanbaalenii PYR-1 4648560 YP_951968.1 CDS Mvan_1126 NC_008726.1 1195279 1196430 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4403 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1195279..1196430 Mycobacterium vanbaalenii PYR-1 4648561 YP_951969.1 CDS Mvan_1127 NC_008726.1 1196456 1196863 R PFAM: protein of unknown function DUF732; KEGG: mpa:MAP3158c hypothetical protein; hypothetical protein complement(1196456..1196863) Mycobacterium vanbaalenii PYR-1 4648562 YP_951970.1 CDS Mvan_1128 NC_008726.1 1197306 1198403 D KEGG: mbo:Mb0637 possible membrane protein; hypothetical protein 1197306..1198403 Mycobacterium vanbaalenii PYR-1 4648563 YP_951971.1 CDS Mvan_1129 NC_008726.1 1198411 1199352 D KEGG: mbo:Mb0638 possible membrane protein; hypothetical protein 1198411..1199352 Mycobacterium vanbaalenii PYR-1 4648564 YP_951972.1 CDS Mvan_1130 NC_008726.1 1199456 1200481 D PFAM: Patatin; KEGG: mpa:MAP4099 hypothetical protein; patatin 1199456..1200481 Mycobacterium vanbaalenii PYR-1 4648565 YP_951973.1 CDS Mvan_1131 NC_008726.1 1200869 1202338 D KEGG: pca:Pcar_1811 hypothetical protein; hypothetical protein 1200869..1202338 Mycobacterium vanbaalenii PYR-1 4648566 YP_951974.1 CDS Mvan_1132 NC_008726.1 1202335 1202913 D KEGG: pca:Pcar_1810 hypothetical protein; hypothetical protein 1202335..1202913 Mycobacterium vanbaalenii PYR-1 4648567 YP_951975.1 CDS Mvan_1133 NC_008726.1 1202906 1206277 D KEGG: pca:Pcar_1809 hypothetical protein; hypothetical protein 1202906..1206277 Mycobacterium vanbaalenii PYR-1 4648568 YP_951976.1 CDS Mvan_1134 NC_008726.1 1206274 1207428 D KEGG: pca:Pcar_1808 hypothetical protein; hypothetical protein 1206274..1207428 Mycobacterium vanbaalenii PYR-1 4646698 YP_951977.1 CDS Mvan_1135 NC_008726.1 1207886 1208125 D hypothetical protein 1207886..1208125 Mycobacterium vanbaalenii PYR-1 4646699 YP_951978.1 CDS Mvan_1136 NC_008726.1 1208187 1208513 D PFAM: helix-turn-helix domain protein; KEGG: xac:XAC0188 transcriptional regulator; XRE family transcriptional regulator 1208187..1208513 Mycobacterium vanbaalenii PYR-1 4646700 YP_951979.1 CDS Mvan_1137 NC_008726.1 1208513 1209793 D PFAM: HipA domain protein; KEGG: xom:XOO_4246 HipA protein; HipA domain-containing protein 1208513..1209793 Mycobacterium vanbaalenii PYR-1 4646701 YP_951980.1 CDS Mvan_1138 NC_008726.1 1209906 1211234 R PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: cef:CE1215 hypothetical protein; plasmid pRiA4b ORF-3 family protein complement(1209906..1211234) Mycobacterium vanbaalenii PYR-1 4646702 YP_951981.1 CDS Mvan_1139 NC_008726.1 1211328 1212980 D PFAM: zinc finger, SWIM domain protein; KEGG: sma:SAV457 hypothetical protein; zinc finger SWIM domain-containing protein 1211328..1212980 Mycobacterium vanbaalenii PYR-1 4646703 YP_951982.1 CDS Mvan_1141 NC_008726.1 1213479 1213868 R KEGG: mmc:Mmcs_2659 hypothetical protein; hypothetical protein complement(1213479..1213868) Mycobacterium vanbaalenii PYR-1 4646705 YP_951983.1 CDS Mvan_1142 NC_008726.1 1213956 1214879 R PFAM: ribonuclease H; KEGG: nfa:nfa39810 hypothetical protein; ribonuclease H complement(1213956..1214879) Mycobacterium vanbaalenii PYR-1 4646706 YP_951984.1 CDS Mvan_1143 NC_008726.1 1214954 1217548 R PFAM: SEC-C motif domain protein; Tetratricopeptide TPR_4; KEGG: mbo:Mb0630c hypothetical protein; SecC motif-containing protein complement(1214954..1217548) Mycobacterium vanbaalenii PYR-1 4646707 YP_951985.1 CDS Mvan_1144 NC_008726.1 1217632 1217979 R PFAM: PemK family protein; KEGG: mbo:Mb2824c hypothetical protein; transcriptional modulator of MazE/toxin MazF complement(1217632..1217979) Mycobacterium vanbaalenii PYR-1 4646708 YP_951986.1 CDS Mvan_1145 NC_008726.1 1217966 1218196 R CopG family transcriptional regulator complement(1217966..1218196) Mycobacterium vanbaalenii PYR-1 4646709 YP_951987.1 CDS Mvan_1146 NC_008726.1 1218412 1220067 D KEGG: mmc:Mmcs_0827 hypothetical protein; hypothetical protein 1218412..1220067 Mycobacterium vanbaalenii PYR-1 4646710 YP_951988.1 CDS Mvan_1147 NC_008726.1 1220129 1221004 D KEGG: mmc:Mmcs_0848 hypothetical protein; hypothetical protein 1220129..1221004 Mycobacterium vanbaalenii PYR-1 4646711 YP_951989.1 CDS Mvan_1148 NC_008726.1 1221391 1222131 D KEGG: mmc:Mmcs_5487 hypothetical protein; hypothetical protein 1221391..1222131 Mycobacterium vanbaalenii PYR-1 4646712 YP_951990.1 CDS Mvan_1149 NC_008726.1 1222168 1222434 R hypothetical protein complement(1222168..1222434) Mycobacterium vanbaalenii PYR-1 4646713 YP_951991.1 CDS Mvan_1150 NC_008726.1 1222431 1222724 R hypothetical protein complement(1222431..1222724) Mycobacterium vanbaalenii PYR-1 4646714 YP_951992.1 CDS Mvan_1151 NC_008726.1 1222766 1224253 R KEGG: mpa:MAP4333 hypothetical protein; hypothetical protein complement(1222766..1224253) Mycobacterium vanbaalenii PYR-1 4646715 YP_951993.1 CDS Mvan_1152 NC_008726.1 1224531 1226663 D KEGG: rpc:RPC_4174 diguanylate phosphodiesterase (EAL domain) with GAF sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1224531..1226663 Mycobacterium vanbaalenii PYR-1 4646716 YP_951994.1 CDS Mvan_1153 NC_008726.1 1226696 1227451 D KEGG: mmc:Mmcs_0846 hypothetical protein; hypothetical protein 1226696..1227451 Mycobacterium vanbaalenii PYR-1 4646717 YP_951995.1 CDS Mvan_1154 NC_008726.1 1227456 1227719 R hypothetical protein complement(1227456..1227719) Mycobacterium vanbaalenii PYR-1 4646718 YP_951996.1 CDS Mvan_1155 NC_008726.1 1227929 1230259 D KEGG: sco:SCO0324 secreted protein; secreted protein 1227929..1230259 Mycobacterium vanbaalenii PYR-1 4646719 YP_951997.1 CDS Mvan_1156 NC_008726.1 1230261 1230839 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1230261..1230839) Mycobacterium vanbaalenii PYR-1 4646720 YP_951998.1 CDS Mvan_1157 NC_008726.1 1230907 1231554 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1230907..1231554) Mycobacterium vanbaalenii PYR-1 4646721 YP_951999.1 CDS Mvan_1158 NC_008726.1 1231745 1232209 D PFAM: Endoribonuclease L-PSP; KEGG: ade:Adeh_2881 endoribonuclease L-PSP; endoribonuclease L-PSP 1231745..1232209 Mycobacterium vanbaalenii PYR-1 4646722 YP_952000.1 CDS Mvan_1159 NC_008726.1 1232388 1233890 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mmc:Mmcs_0896 sulphate transporter; sulfate transporter 1232388..1233890 Mycobacterium vanbaalenii PYR-1 4646548 YP_952001.1 CDS Mvan_1160 NC_008726.1 1233883 1234284 D PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_0895 transcriptional regulator, MerR family; MerR family transcriptional regulator 1233883..1234284 Mycobacterium vanbaalenii PYR-1 4646549 YP_952002.1 CDS Mvan_1161 NC_008726.1 1234271 1236112 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1234271..1236112) Mycobacterium vanbaalenii PYR-1 4646550 YP_952003.1 CDS Mvan_1162 NC_008726.1 1236190 1237035 D SMART: helix-turn-helix domain protein; KEGG: nfa:nfa23790 putative DNA-binding protein; XRE family transcriptional regulator 1236190..1237035 Mycobacterium vanbaalenii PYR-1 4646551 YP_952004.1 CDS Mvan_1163 NC_008726.1 1237011 1237580 R KEGG: sco:SCO0646 TetR-family transcriptional regulator; TetR family transcriptional regulator complement(1237011..1237580) Mycobacterium vanbaalenii PYR-1 4646552 YP_952005.1 CDS Mvan_1164 NC_008726.1 1237700 1238713 R PFAM: Integral membrane protein TerC; KEGG: nfa:nfa38610 putative transporter membrane protein; integral membrane protein TerC complement(1237700..1238713) Mycobacterium vanbaalenii PYR-1 4646553 YP_952006.1 CDS Mvan_1165 NC_008726.1 1238785 1239798 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5193 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1238785..1239798 Mycobacterium vanbaalenii PYR-1 4646554 YP_952007.1 CDS Mvan_1166 NC_008726.1 1239808 1240347 D KEGG: mbo:Mb1923c hypothetical protein; hypothetical protein 1239808..1240347 Mycobacterium vanbaalenii PYR-1 4646555 YP_952008.1 CDS Mvan_1167 NC_008726.1 1240369 1241958 R PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0225 protein of unknown function DUF894, DitE; hypothetical protein complement(1240369..1241958) Mycobacterium vanbaalenii PYR-1 4646556 YP_952009.1 CDS Mvan_1168 NC_008726.1 1241962 1242975 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_0862 hypothetical protein; luciferase family protein complement(1241962..1242975) Mycobacterium vanbaalenii PYR-1 4646557 YP_952010.1 CDS Mvan_1169 NC_008726.1 1242998 1243606 R PFAM: regulatory protein, TetR; KEGG: nfa:nfa1170 putative transcriptional regulator; TetR family transcriptional regulator complement(1242998..1243606) Mycobacterium vanbaalenii PYR-1 4646558 YP_952011.1 CDS Mvan_1170 NC_008726.1 1243951 1244196 D PFAM: Rv0623 family protein transcription factor; KEGG: mbo:Mb0624 hypothetical protein; transcription factor 1243951..1244196 Mycobacterium vanbaalenii PYR-1 4646559 YP_952012.1 CDS Mvan_1171 NC_008726.1 1244193 1244588 D PFAM: PilT protein domain protein; KEGG: mbo:Mb0625 hypothetical protein; PilT domain-containing protein 1244193..1244588 Mycobacterium vanbaalenii PYR-1 4646560 YP_952013.1 CDS Mvan_1172 NC_008726.1 1244661 1248023 R KEGG: mmc:Mmcs_0863 hypothetical protein; hypothetical protein complement(1244661..1248023) Mycobacterium vanbaalenii PYR-1 4646561 YP_952014.1 CDS Mvan_1173 NC_008726.1 1248016 1248705 R KEGG: mmc:Mmcs_0864 hypothetical protein; hypothetical protein complement(1248016..1248705) Mycobacterium vanbaalenii PYR-1 4646562 YP_952015.1 CDS Mvan_1174 NC_008726.1 1248702 1250159 R KEGG: mmc:Mmcs_0865 hypothetical protein; hypothetical protein complement(1248702..1250159) Mycobacterium vanbaalenii PYR-1 4646563 YP_952016.1 CDS Mvan_1175 NC_008726.1 1250404 1251150 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3728 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1250404..1251150 Mycobacterium vanbaalenii PYR-1 4646564 YP_952017.1 CDS Mvan_1176 NC_008726.1 1251156 1251782 D KEGG: lxx:Lxx09900 hypothetical protein; hypothetical protein 1251156..1251782 Mycobacterium vanbaalenii PYR-1 4646565 YP_952018.1 CDS Mvan_1177 NC_008726.1 1251914 1252591 D KEGG: ade:Adeh_3507 hypothetical protein; hypothetical protein 1251914..1252591 Mycobacterium vanbaalenii PYR-1 4646566 YP_952019.1 CDS Mvan_1178 NC_008726.1 1252815 1254179 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa30780 putative oxidoreductase; amine oxidase complement(1252815..1254179) Mycobacterium vanbaalenii PYR-1 4646567 YP_952020.1 CDS Mvan_1179 NC_008726.1 1254524 1255555 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dde:Dde_1657 threonine aldolase; threonine aldolase complement(1254524..1255555) Mycobacterium vanbaalenii PYR-1 4646568 YP_952021.1 CDS Mvan_1180 NC_008726.1 1255627 1257975 R SMART: AAA ATPase; KEGG: mmc:Mmcs_0861 ATPas; ATPase AAA complement(1255627..1257975) Mycobacterium vanbaalenii PYR-1 4646569 YP_952022.1 CDS Mvan_1181 NC_008726.1 1257972 1258661 R KEGG: mmc:Mmcs_5227 hypothetical protein; hypothetical protein complement(1257972..1258661) Mycobacterium vanbaalenii PYR-1 4646570 YP_952023.1 CDS Mvan_1182 NC_008726.1 1258693 1259310 D KEGG: rpc:RPC_1183 hypothetical protein; hypothetical protein 1258693..1259310 Mycobacterium vanbaalenii PYR-1 4646571 YP_952024.1 CDS Mvan_1183 NC_008726.1 1259310 1262441 D SMART: AAA ATPase; KEGG: rpc:RPC_1184 ATPase; ATPase AAA 1259310..1262441 Mycobacterium vanbaalenii PYR-1 4646572 YP_952025.1 CDS Mvan_1184 NC_008726.1 1262476 1264110 R PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_4369 amidohydrolase 3; amidohydrolase 3 complement(1262476..1264110) Mycobacterium vanbaalenii PYR-1 4646650 YP_952026.1 CDS Mvan_1185 NC_008726.1 1264137 1264865 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2657 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1264137..1264865) Mycobacterium vanbaalenii PYR-1 4646651 YP_952027.1 CDS Mvan_1186 NC_008726.1 1264876 1265889 R PFAM: Acetamidase/Formamidase; KEGG: mmc:Mmcs_2656 acetamidase/formamidase; acetamidase/formamidase complement(1264876..1265889) Mycobacterium vanbaalenii PYR-1 4646652 YP_952028.1 CDS Mvan_1187 NC_008726.1 1265942 1266382 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein; hypothetical protein 1265942..1266382 Mycobacterium vanbaalenii PYR-1 4646653 YP_952029.1 CDS Mvan_1188 NC_008726.1 1266421 1266837 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_2655 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 1266421..1266837 Mycobacterium vanbaalenii PYR-1 4646654 YP_952030.1 CDS Mvan_1189 NC_008726.1 1266901 1267755 D KEGG: mmc:Mmcs_4705 hypothetical protein; hypothetical protein 1266901..1267755 Mycobacterium vanbaalenii PYR-1 4646655 YP_952031.1 CDS Mvan_1190 NC_008726.1 1267756 1268793 R PFAM: putative esterase; KEGG: mmc:Mmcs_4182 putative esterase; putative esterase complement(1267756..1268793) Mycobacterium vanbaalenii PYR-1 4646656 YP_952032.1 CDS Mvan_1191 NC_008726.1 1268882 1269580 R KEGG: mmc:Mmcs_2697 hypothetical protein; hypothetical protein complement(1268882..1269580) Mycobacterium vanbaalenii PYR-1 4646657 YP_952033.1 CDS Mvan_1192 NC_008726.1 1269696 1272218 R KEGG: gvi:glr0998 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase complement(1269696..1272218) Mycobacterium vanbaalenii PYR-1 4646658 YP_952034.1 CDS Mvan_1193 NC_008726.1 1272360 1274312 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-4 domain protein; KEGG: bja:bll6704 hypothetical protein; diguanylate cyclase 1272360..1274312 Mycobacterium vanbaalenii PYR-1 4646659 YP_952035.1 CDS Mvan_1194 NC_008726.1 1274241 1275263 R PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mmc:Mmcs_1061 monooxygenase, FAD-binding protein; FAD dependent oxidoreductase complement(1274241..1275263) Mycobacterium vanbaalenii PYR-1 4646660 YP_952036.1 CDS Mvan_1195 NC_008726.1 1275260 1275766 R PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mmc:Mmcs_1060 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(1275260..1275766) Mycobacterium vanbaalenii PYR-1 4646661 YP_952037.1 CDS Mvan_1196 NC_008726.1 1275771 1276844 R PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: mmc:Mmcs_1059 chalcone and stilbene synthases-like protein; chalcone/stilbene synthase domain-containing protein complement(1275771..1276844) Mycobacterium vanbaalenii PYR-1 4646662 YP_952038.1 CDS Mvan_1197 NC_008726.1 1276841 1279024 R KEGG: mpa:MAP2635c hypothetical protein; hypothetical protein complement(1276841..1279024) Mycobacterium vanbaalenii PYR-1 4646663 YP_952039.1 CDS Mvan_1198 NC_008726.1 1279190 1279918 R KEGG: mmc:Mmcs_2687 hypothetical protein; hypothetical protein complement(1279190..1279918) Mycobacterium vanbaalenii PYR-1 4646664 YP_952040.1 CDS Mvan_1199 NC_008726.1 1280103 1280297 D hypothetical protein 1280103..1280297 Mycobacterium vanbaalenii PYR-1 4646665 YP_952041.1 CDS Mvan_1200 NC_008726.1 1280305 1281558 R KEGG: nfa:nfa12010 putative alkanesulfonate monooxygenase; alkanesulfonate monooxygenase complement(1280305..1281558) Mycobacterium vanbaalenii PYR-1 4646666 YP_952042.1 CDS Mvan_1201 NC_008726.1 1281609 1282952 R PFAM: flavin-containing monooxygenase FMO; KEGG: mlo:mlr7328 hypothetical protein; flavin-containing monooxygenase FMO complement(1281609..1282952) Mycobacterium vanbaalenii PYR-1 4646667 YP_952043.1 CDS Mvan_1202 NC_008726.1 1282972 1285230 R PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: ret:RHE_PE00406 probable aminomethyltransferase protein; glycine cleavage T protein (aminomethyl transferase) complement(1282972..1285230) Mycobacterium vanbaalenii PYR-1 4646668 YP_952044.1 CDS Mvan_1203 NC_008726.1 1285271 1285645 R KEGG: nfa:nfa21060 hypothetical protein; hypothetical protein complement(1285271..1285645) Mycobacterium vanbaalenii PYR-1 4646669 YP_952045.1 CDS Mvan_1204 NC_008726.1 1285863 1288250 R PFAM: conserved hypothetical protein 374; KEGG: mtu:Rv0585c probable conserved integral membrane protein; hypothetical protein complement(1285863..1288250) Mycobacterium vanbaalenii PYR-1 4646670 YP_952046.1 CDS Mvan_1205 NC_008726.1 1288484 1288783 R KEGG: mmc:Mmcs_0410 hypothetical protein; hypothetical protein complement(1288484..1288783) Mycobacterium vanbaalenii PYR-1 4646671 YP_952047.1 CDS Mvan_1206 NC_008726.1 1288906 1289214 R KEGG: mmc:Mmcs_0410 hypothetical protein; hypothetical protein complement(1288906..1289214) Mycobacterium vanbaalenii PYR-1 4646672 YP_952048.1 CDS Mvan_1207 NC_008726.1 1289403 1289657 R KEGG: mmc:Mmcs_0410 hypothetical protein; hypothetical protein complement(1289403..1289657) Mycobacterium vanbaalenii PYR-1 4646673 YP_952049.1 CDS Mvan_1208 NC_008726.1 1289777 1291432 R TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: mmc:Mmcs_0897 exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha complement(1289777..1291432) Mycobacterium vanbaalenii PYR-1 4644255 YP_952050.1 CDS Mvan_1209 NC_008726.1 1291429 1294722 R TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_0900 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta complement(1291429..1294722) Mycobacterium vanbaalenii PYR-1 4644256 YP_952051.1 CDS Mvan_1210 NC_008726.1 1294722 1297976 R TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: mmc:Mmcs_0901 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma complement(1294722..1297976) Mycobacterium vanbaalenii PYR-1 4644257 YP_952052.1 CDS Mvan_1211 NC_008726.1 1297983 1298582 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mmc:Mmcs_0902 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(1297983..1298582) Mycobacterium vanbaalenii PYR-1 4644258 YP_952053.1 CDS Mvan_1212 NC_008726.1 1298688 1299404 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4927 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1298688..1299404) Mycobacterium vanbaalenii PYR-1 4644259 YP_952054.1 CDS Mvan_1213 NC_008726.1 1299462 1300127 R PFAM: nitroreductase; KEGG: ret:RHE_PF00227 probable nitroreductase protein; nitroreductase complement(1299462..1300127) Mycobacterium vanbaalenii PYR-1 4644260 YP_952055.1 CDS Mvan_1214 NC_008726.1 1300244 1303036 R PFAM: regulatory protein, LuxR; KEGG: mmc:Mmcs_4923 transcriptional regulator, LuxR family; regulatory protein LuxR complement(1300244..1303036) Mycobacterium vanbaalenii PYR-1 4644261 YP_952056.1 CDS Mvan_1215 NC_008726.1 1303141 1303842 R KEGG: mmc:Mmcs_0879 putative conserved membrane protein; hypothetical protein complement(1303141..1303842) Mycobacterium vanbaalenii PYR-1 4644262 YP_952057.1 CDS Mvan_1216 NC_008726.1 1303903 1305006 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0905 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1303903..1305006 Mycobacterium vanbaalenii PYR-1 4644263 YP_952058.1 CDS Mvan_1217 NC_008726.1 1304984 1305976 R PFAM: Mg2+ transporter protein, CorA family protein; KEGG: mmc:Mmcs_0906 Mg2+ transporter protein, CorA-like protein; Mg2+ transporter protein, CorA family protein complement(1304984..1305976) Mycobacterium vanbaalenii PYR-1 4644264 YP_952059.1 CDS Mvan_1218 NC_008726.1 1305984 1307078 R PFAM: glycosyl transferase, group 1; KEGG: bxe:Bxe_A1412 putative glycosyl transferases group 1; group 1 glycosyl transferase complement(1305984..1307078) Mycobacterium vanbaalenii PYR-1 4644265 YP_952060.1 CDS Mvan_1219 NC_008726.1 1307081 1307914 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rha:RHA1_ro03335 probable nitrilase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1307081..1307914) Mycobacterium vanbaalenii PYR-1 4644266 YP_952061.1 CDS Mvan_1220 NC_008726.1 1307911 1309326 R PFAM: GCN5-related N-acetyltransferase; AIR synthase related protein domain protein; KEGG: syw:SYNW1422 hypothetical protein; N-acetyltransferase GCN5 complement(1307911..1309326) Mycobacterium vanbaalenii PYR-1 4644267 YP_952062.1 CDS Mvan_1221 NC_008726.1 1309332 1310402 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bxe:Bxe_A1409 hypothetical protein; radical SAM domain-containing protein complement(1309332..1310402) Mycobacterium vanbaalenii PYR-1 4644268 YP_952063.1 CDS Mvan_1222 NC_008726.1 1310407 1311690 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A1414 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1310407..1311690) Mycobacterium vanbaalenii PYR-1 4644269 YP_952064.1 CDS Mvan_1223 NC_008726.1 1311687 1311983 R KEGG: bxe:Bxe_A1413 hypothetical protein; hypothetical protein complement(1311687..1311983) Mycobacterium vanbaalenii PYR-1 4644270 YP_952065.1 CDS Mvan_1224 NC_008726.1 1311976 1312860 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpa:RPA2416 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1311976..1312860) Mycobacterium vanbaalenii PYR-1 4644271 YP_952066.1 CDS Mvan_1225 NC_008726.1 1312881 1313402 R KEGG: bxe:Bxe_A1407 hypothetical protein; hypothetical protein complement(1312881..1313402) Mycobacterium vanbaalenii PYR-1 4644272 YP_952067.1 CDS Mvan_1226 NC_008726.1 1313658 1314359 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1313658..1314359) Mycobacterium vanbaalenii PYR-1 4644273 YP_952068.1 CDS Mvan_1227 NC_008726.1 1314443 1315450 R KEGG: sma:SAV1072 hypothetical protein; hypothetical protein complement(1314443..1315450) Mycobacterium vanbaalenii PYR-1 4644274 YP_952069.1 CDS Mvan_1228 NC_008726.1 1315564 1316352 R PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_0914 beta-lactamase-like protein; beta-lactamase domain-containing protein complement(1315564..1316352) Mycobacterium vanbaalenii PYR-1 4644275 YP_952070.1 CDS rpmG NC_008726.1 1316668 1316835 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 1316668..1316835 Mycobacterium vanbaalenii PYR-1 4644278 YP_952071.1 CDS Mvan_1230 NC_008726.1 1316904 1317383 D functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadA 1316904..1317383 Mycobacterium vanbaalenii PYR-1 4646873 YP_952072.1 CDS Mvan_1231 NC_008726.1 1317370 1317798 D functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadB 1317370..1317798 Mycobacterium vanbaalenii PYR-1 4646874 YP_952073.1 CDS Mvan_1232 NC_008726.1 1317808 1318341 D functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadC 1317808..1318341 Mycobacterium vanbaalenii PYR-1 4646875 YP_952074.1 CDS secE NC_008726.1 1318636 1319079 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1318636..1319079 Mycobacterium vanbaalenii PYR-1 4646877 YP_952075.1 CDS nusG NC_008726.1 1319134 1319934 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1319134..1319934 Mycobacterium vanbaalenii PYR-1 4646878 YP_952076.1 CDS rplK NC_008726.1 1319977 1320405 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1319977..1320405 Mycobacterium vanbaalenii PYR-1 4646879 YP_952077.1 CDS rplA NC_008726.1 1320545 1321252 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1320545..1321252 Mycobacterium vanbaalenii PYR-1 4646880 YP_952078.1 CDS Mvan_1237 NC_008726.1 1321691 1321987 R KEGG: mmc:Mmcs_0778 hypothetical protein; hypothetical protein complement(1321691..1321987) Mycobacterium vanbaalenii PYR-1 4646881 YP_952079.1 CDS Mvan_1238 NC_008726.1 1322129 1323685 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_0949 PE-PPE-like protein; hypothetical protein 1322129..1323685 Mycobacterium vanbaalenii PYR-1 4646882 YP_952080.1 CDS Mvan_1239 NC_008726.1 1323746 1324642 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0951 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(1323746..1324642) Mycobacterium vanbaalenii PYR-1 4646883 YP_952081.1 CDS Mvan_1240 NC_008726.1 1324807 1325709 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0953 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1324807..1325709) Mycobacterium vanbaalenii PYR-1 4646884 YP_952082.1 CDS Mvan_1241 NC_008726.1 1325709 1327064 R PFAM: ABC-1 domain protein; KEGG: mmc:Mmcs_0954 ABC-1; hypothetical protein complement(1325709..1327064) Mycobacterium vanbaalenii PYR-1 4646885 YP_952083.1 CDS Mvan_1242 NC_008726.1 1327109 1327429 R KEGG: mmc:Mmcs_1284 hypothetical protein; hypothetical protein complement(1327109..1327429) Mycobacterium vanbaalenii PYR-1 4646886 YP_952084.1 CDS Mvan_1243 NC_008726.1 1327507 1328517 R KEGG: mpa:MAP3157 hypothetical protein; hypothetical protein complement(1327507..1328517) Mycobacterium vanbaalenii PYR-1 4646887 YP_952085.1 CDS Mvan_1244 NC_008726.1 1328612 1329232 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0957 transcriptional regulator, TetR family; TetR family transcriptional regulator 1328612..1329232 Mycobacterium vanbaalenii PYR-1 4646888 YP_952086.1 CDS Mvan_1245 NC_008726.1 1329312 1329905 R PFAM: protein of unknown function DUF664; KEGG: mmc:Mmcs_0958 protein of unknown function DUF664; hypothetical protein complement(1329312..1329905) Mycobacterium vanbaalenii PYR-1 4646889 YP_952087.1 CDS Mvan_1246 NC_008726.1 1329908 1330447 R KEGG: mmc:Mmcs_0959 hypothetical protein; hypothetical protein complement(1329908..1330447) Mycobacterium vanbaalenii PYR-1 4646890 YP_952088.1 CDS Mvan_1247 NC_008726.1 1330510 1331463 D PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_0960 helix-turn-helix, type 11; helix-turn-helix, type 11 domain-containing protein 1330510..1331463 Mycobacterium vanbaalenii PYR-1 4646891 YP_952089.1 CDS Mvan_1248 NC_008726.1 1331479 1331829 R KEGG: mmc:Mmcs_4285 hypothetical protein; hypothetical protein complement(1331479..1331829) Mycobacterium vanbaalenii PYR-1 4646892 YP_952090.1 CDS Mvan_1249 NC_008726.1 1331991 1336106 D PFAM: glycoside hydrolase, family 38; glycosyl hydrolases 38 domain protein; KEGG: mmc:Mmcs_0963 glycoside hydrolase, family 38; glycoside hydrolase family protein 1331991..1336106 Mycobacterium vanbaalenii PYR-1 4646893 YP_952091.1 CDS Mvan_1250 NC_008726.1 1336103 1336708 D KEGG: mmc:Mmcs_0964 FabD2; FabD2 protein 1336103..1336708 Mycobacterium vanbaalenii PYR-1 4646894 YP_952092.1 CDS Mvan_1251 NC_008726.1 1336708 1337628 D PFAM: ROK family protein; KEGG: mmc:Mmcs_0965 ROK domain containing protein; ROK family protein 1336708..1337628 Mycobacterium vanbaalenii PYR-1 4646895 YP_952093.1 CDS rplJ NC_008726.1 1337879 1338418 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1337879..1338418 Mycobacterium vanbaalenii PYR-1 4646896 YP_952094.1 CDS rplL NC_008726.1 1338461 1338853 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1338461..1338853 Mycobacterium vanbaalenii PYR-1 4648594 YP_952095.1 CDS Mvan_1254 NC_008726.1 1339012 1340085 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_0968 ABC transporter related; ABC transporter--like protein 1339012..1340085 Mycobacterium vanbaalenii PYR-1 4648595 YP_952096.1 CDS Mvan_1255 NC_008726.1 1340530 1342248 D KEGG: syn:slr1753 hypothetical protein; hypothetical protein 1340530..1342248 Mycobacterium vanbaalenii PYR-1 4648596 YP_952097.1 CDS Mvan_1256 NC_008726.1 1342319 1344085 D KEGG: mxa:MXAN_2257 FHA domain protein; hypothetical protein 1342319..1344085 Mycobacterium vanbaalenii PYR-1 4648597 YP_952098.1 CDS rpoB NC_008726.1 1344387 1347872 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1344387..1347872 Mycobacterium vanbaalenii PYR-1 4648598 YP_952099.1 CDS Mvan_1258 NC_008726.1 1347927 1351880 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1347927..1351880 Mycobacterium vanbaalenii PYR-1 4648599 YP_952100.1 CDS Mvan_1260 NC_008726.1 1353061 1353708 D KEGG: sco:SCO3702 DNA-binding protein; DNA-binding protein 1353061..1353708 Mycobacterium vanbaalenii PYR-1 4648601 YP_952101.1 CDS Mvan_1261 NC_008726.1 1353751 1354530 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1353751..1354530 Mycobacterium vanbaalenii PYR-1 4648602 YP_952102.1 CDS Mvan_1262 NC_008726.1 1354637 1355704 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: mxa:MXAN_0451 PAP2 family protein; PA-phosphatase-like phosphoesterase 1354637..1355704 Mycobacterium vanbaalenii PYR-1 4648603 YP_952103.1 CDS Mvan_1263 NC_008726.1 1355680 1356522 R TIGRFAM: methyltransferase FkbM family; KEGG: jan:Jann_2363 methyltransferase FkbM; FkbM family methyltransferase complement(1355680..1356522) Mycobacterium vanbaalenii PYR-1 4648604 YP_952104.1 CDS Mvan_1264 NC_008726.1 1357283 1359673 D PFAM: Collagen triple helix repeat; KEGG: mtc:MT3615.3 PE_PGRS family protein; triple helix repeat-containing collagen 1357283..1359673 Mycobacterium vanbaalenii PYR-1 4648605 YP_952105.1 CDS purU NC_008726.1 1359739 1360626 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1359739..1360626) Mycobacterium vanbaalenii PYR-1 4648606 YP_952106.1 CDS Mvan_1266 NC_008726.1 1360631 1362322 R PFAM: glycosyl transferase, family 2; KEGG: rme:Rmet_5618 glycosyl transferase, family 2; glycosyl transferase family protein complement(1360631..1362322) Mycobacterium vanbaalenii PYR-1 4648607 YP_952107.1 CDS Mvan_1267 NC_008726.1 1362328 1363380 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mbo:Mb2446 hypothetical protein; type 12 methyltransferase complement(1362328..1363380) Mycobacterium vanbaalenii PYR-1 4648608 YP_952108.1 CDS Mvan_1268 NC_008726.1 1363503 1364075 D KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein; hypothetical protein 1363503..1364075 Mycobacterium vanbaalenii PYR-1 4648609 YP_952109.1 CDS Mvan_1269 NC_008726.1 1364125 1365780 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0975 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 1364125..1365780 Mycobacterium vanbaalenii PYR-1 4648610 YP_952110.1 CDS Mvan_1270 NC_008726.1 1365777 1366685 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1365777..1366685 Mycobacterium vanbaalenii PYR-1 4648611 YP_952111.1 CDS Mvan_1271 NC_008726.1 1366708 1367421 D PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: mmc:Mmcs_0977 PaaX-like protein; PaaX domain-containing protein, C- domain 1366708..1367421 Mycobacterium vanbaalenii PYR-1 4648612 YP_952112.1 CDS Mvan_1272 NC_008726.1 1367418 1368215 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1367418..1368215 Mycobacterium vanbaalenii PYR-1 4648613 YP_952113.1 CDS Mvan_1273 NC_008726.1 1368217 1368687 R hypothetical protein complement(1368217..1368687) Mycobacterium vanbaalenii PYR-1 4648614 YP_952114.1 CDS Mvan_1274 NC_008726.1 1368740 1369141 R KEGG: mmc:Mmcs_0979 hypothetical protein; hypothetical protein complement(1368740..1369141) Mycobacterium vanbaalenii PYR-1 4648615 YP_952115.1 CDS Mvan_1275 NC_008726.1 1369144 1369476 R KEGG: mmc:Mmcs_0980 putative conserved transmembrane protein; putative transmembrane protein complement(1369144..1369476) Mycobacterium vanbaalenii PYR-1 4648616 YP_952116.1 CDS Mvan_1276 NC_008726.1 1369589 1370140 D KEGG: mmc:Mmcs_0981 hypothetical protein; hypothetical protein 1369589..1370140 Mycobacterium vanbaalenii PYR-1 4648617 YP_952117.1 CDS Mvan_1277 NC_008726.1 1370140 1370676 D KEGG: mmc:Mmcs_0982 hypothetical protein; hypothetical protein 1370140..1370676 Mycobacterium vanbaalenii PYR-1 4648411 YP_952118.1 CDS Mvan_1278 NC_008726.1 1370736 1371311 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0983 transcriptional regulator, TetR family; TetR family transcriptional regulator 1370736..1371311 Mycobacterium vanbaalenii PYR-1 4648412 YP_952119.1 CDS rpsL NC_008726.1 1371597 1371971 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1371597..1371971 Mycobacterium vanbaalenii PYR-1 4648413 YP_952120.1 CDS Mvan_1280 NC_008726.1 1371971 1372441 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1371971..1372441 Mycobacterium vanbaalenii PYR-1 4648414 YP_952121.1 CDS Mvan_1281 NC_008726.1 1372544 1374646 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1372544..1374646 Mycobacterium vanbaalenii PYR-1 4648415 YP_952122.1 CDS Mvan_1282 NC_008726.1 1374740 1375930 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1374740..1375930 Mycobacterium vanbaalenii PYR-1 4648416 YP_952123.1 CDS Mvan_1283 NC_008726.1 1376099 1376941 D PFAM: cutinase; KEGG: mmc:Mmcs_0988 cutinase; cutinase 1376099..1376941 Mycobacterium vanbaalenii PYR-1 4648417 YP_952124.1 CDS Mvan_1284 NC_008726.1 1376925 1378259 R PFAM: major facilitator superfamily MFS_1; KEGG: cef:CE1964 putative efflux protein; major facilitator superfamily transporter complement(1376925..1378259) Mycobacterium vanbaalenii PYR-1 4648418 YP_952125.1 CDS Mvan_1285 NC_008726.1 1378309 1379136 D KEGG: mmc:Mmcs_0989 hypothetical protein; hypothetical protein 1378309..1379136 Mycobacterium vanbaalenii PYR-1 4648419 YP_952126.1 CDS fabG NC_008726.1 1379179 1380036 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1379179..1380036 Mycobacterium vanbaalenii PYR-1 4648420 YP_952127.1 CDS Mvan_1287 NC_008726.1 1380033 1381244 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0992 ornithine aminotransferase; ornithine aminotransferase complement(1380033..1381244) Mycobacterium vanbaalenii PYR-1 4648421 YP_952128.1 CDS Mvan_1288 NC_008726.1 1381241 1382113 R PFAM: amidinotransferase; KEGG: mmc:Mmcs_0993 amidinotransferase; amidinotransferase complement(1381241..1382113) Mycobacterium vanbaalenii PYR-1 4648422 YP_952129.1 CDS Mvan_1289 NC_008726.1 1382207 1382653 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_0994 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1382207..1382653 Mycobacterium vanbaalenii PYR-1 4648423 YP_952130.1 CDS Mvan_1290 NC_008726.1 1382710 1383894 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0995 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1382710..1383894 Mycobacterium vanbaalenii PYR-1 4648424 YP_952131.1 CDS Mvan_1291 NC_008726.1 1383996 1385744 D PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein 1383996..1385744 Mycobacterium vanbaalenii PYR-1 4648425 YP_952132.1 CDS Mvan_1292 NC_008726.1 1385741 1386874 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_0996 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1385741..1386874) Mycobacterium vanbaalenii PYR-1 4648426 YP_952133.1 CDS Mvan_1293 NC_008726.1 1387018 1387542 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_0997 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(1387018..1387542) Mycobacterium vanbaalenii PYR-1 4648427 YP_952134.1 CDS Mvan_1294 NC_008726.1 1387559 1388173 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0998 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1387559..1388173) Mycobacterium vanbaalenii PYR-1 4648428 YP_952135.1 CDS Mvan_1295 NC_008726.1 1388373 1388663 D KEGG: mmc:Mmcs_1000 hypothetical protein; hypothetical protein 1388373..1388663 Mycobacterium vanbaalenii PYR-1 4648429 YP_952136.1 CDS Mvan_1296 NC_008726.1 1388660 1389847 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmc:Mmcs_1001 radical SAM; radical SAM domain-containing protein 1388660..1389847 Mycobacterium vanbaalenii PYR-1 4648430 YP_952137.1 CDS Mvan_1297 NC_008726.1 1389854 1391029 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mmc:Mmcs_1002 (S)-2-hydroxy-acid oxidase; (S)-2-hydroxy-acid oxidase 1389854..1391029 Mycobacterium vanbaalenii PYR-1 4648431 YP_952138.1 CDS Mvan_1298 NC_008726.1 1391132 1391875 D PFAM: Creatininase; KEGG: mbo:Mb0714 hypothetical protein; creatininase 1391132..1391875 Mycobacterium vanbaalenii PYR-1 4648432 YP_952139.1 CDS Mvan_1299 NC_008726.1 1391872 1393284 D PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_1004 glycosyl transferase, family 2; glycosyl transferase family protein 1391872..1393284 Mycobacterium vanbaalenii PYR-1 4648433 YP_952140.1 CDS Mvan_1300 NC_008726.1 1393285 1394721 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_1005 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1393285..1394721 Mycobacterium vanbaalenii PYR-1 4648434 YP_952141.1 CDS Mvan_1301 NC_008726.1 1394687 1395949 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_1009 cytochrome P450; cytochrome P450 complement(1394687..1395949) Mycobacterium vanbaalenii PYR-1 4648435 YP_952142.1 CDS Mvan_1302 NC_008726.1 1396050 1397312 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_1010 cytochrome P450; cytochrome P450 complement(1396050..1397312) Mycobacterium vanbaalenii PYR-1 4643760 YP_952143.1 CDS Mvan_1303 NC_008726.1 1397385 1398947 D PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_1011 carboxylesterase, type B; carboxylesterase, type B 1397385..1398947 Mycobacterium vanbaalenii PYR-1 4643761 YP_952144.1 CDS rpsJ NC_008726.1 1399250 1399555 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1399250..1399555 Mycobacterium vanbaalenii PYR-1 4643762 YP_952145.1 CDS rplC NC_008726.1 1399570 1400226 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1399570..1400226 Mycobacterium vanbaalenii PYR-1 4643763 YP_952146.1 CDS rplD NC_008726.1 1400226 1400885 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1400226..1400885 Mycobacterium vanbaalenii PYR-1 4643764 YP_952147.1 CDS rplW NC_008726.1 1400885 1401187 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1400885..1401187 Mycobacterium vanbaalenii PYR-1 4643765 YP_952148.1 CDS rplB NC_008726.1 1401241 1402077 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1401241..1402077 Mycobacterium vanbaalenii PYR-1 4643766 YP_952149.1 CDS rpsS NC_008726.1 1402089 1402370 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1402089..1402370 Mycobacterium vanbaalenii PYR-1 4643767 YP_952150.1 CDS rplV NC_008726.1 1402371 1402838 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1402371..1402838 Mycobacterium vanbaalenii PYR-1 4643768 YP_952151.1 CDS rpsC NC_008726.1 1402838 1403680 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1402838..1403680 Mycobacterium vanbaalenii PYR-1 4643769 YP_952152.1 CDS rplP NC_008726.1 1403683 1404099 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1403683..1404099 Mycobacterium vanbaalenii PYR-1 4643770 YP_952153.1 CDS Mvan_1313 NC_008726.1 1404099 1404332 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1404099..1404332 Mycobacterium vanbaalenii PYR-1 4643771 YP_952154.1 CDS Mvan_1314 NC_008726.1 1404332 1404628 D PFAM: ribosomal protein S17; KEGG: mmc:Mmcs_1022 ribosomal protein S17; 30S ribosomal protein S17 1404332..1404628 Mycobacterium vanbaalenii PYR-1 4643772 YP_952155.1 CDS Mvan_1315 NC_008726.1 1404707 1405474 R PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: fal:FRAAL1347 putative TetR family transcriptional regulatory protein; TetR family transcriptional regulator complement(1404707..1405474) Mycobacterium vanbaalenii PYR-1 4643773 YP_952156.1 CDS Mvan_1316 NC_008726.1 1405481 1406143 D KEGG: tfu:Tfu_0101 hypothetical protein; hypothetical protein 1405481..1406143 Mycobacterium vanbaalenii PYR-1 4643774 YP_952157.1 CDS Mvan_1317 NC_008726.1 1406153 1408507 D PFAM: sulfatase; KEGG: mmc:Mmcs_1023 sulfatase; sulfatase 1406153..1408507 Mycobacterium vanbaalenii PYR-1 4643775 YP_952158.1 CDS Mvan_1318 NC_008726.1 1408513 1409184 D hypothetical protein 1408513..1409184 Mycobacterium vanbaalenii PYR-1 4643776 YP_952159.1 CDS Mvan_1319 NC_008726.1 1409190 1410062 D PFAM: protein of unknown function DUF323; KEGG: mmc:Mmcs_1024 protein of unknown function DUF323; hypothetical protein 1409190..1410062 Mycobacterium vanbaalenii PYR-1 4643777 YP_952160.1 CDS Mvan_1320 NC_008726.1 1410078 1410773 R PFAM: protein of unknown function DUF1275; KEGG: sco:SCO5946 hypothetical protein; hypothetical protein complement(1410078..1410773) Mycobacterium vanbaalenii PYR-1 4643778 YP_952161.1 CDS Mvan_1321 NC_008726.1 1410770 1412317 R KEGG: bpe:BP2974 putative integral membrane protein; putative integral membrane protein complement(1410770..1412317) Mycobacterium vanbaalenii PYR-1 4643779 YP_952162.1 CDS Mvan_1322 NC_008726.1 1412596 1413969 D PFAM: major facilitator superfamily MFS_1; KEGG: cef:CE1208 putative multidrug resistance protein; major facilitator superfamily transporter 1412596..1413969 Mycobacterium vanbaalenii PYR-1 4643780 YP_952163.1 CDS Mvan_1323 NC_008726.1 1413980 1415644 R KEGG: mta:Moth_0207 purine catabolism PurC-like; transcriptional regulator CdaR complement(1413980..1415644) Mycobacterium vanbaalenii PYR-1 4643781 YP_952164.1 CDS Mvan_1324 NC_008726.1 1415839 1416291 D PFAM: protein of unknown function DUF336; KEGG: bbr:BB4642 hypothetical protein; hypothetical protein 1415839..1416291 Mycobacterium vanbaalenii PYR-1 4643782 YP_952165.1 CDS Mvan_1325 NC_008726.1 1416464 1417183 D KEGG: rme:Rmet_3633 TenA/THI-4 protein; TenA/THI-4 protein 1416464..1417183 Mycobacterium vanbaalenii PYR-1 4643783 YP_952166.1 CDS Mvan_1326 NC_008726.1 1417262 1417588 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_4275 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1417262..1417588 Mycobacterium vanbaalenii PYR-1 4643784 YP_952167.1 CDS Mvan_1327 NC_008726.1 1417585 1418823 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rxy:Rxyl_2822 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1417585..1418823 Mycobacterium vanbaalenii PYR-1 4643683 YP_952168.1 CDS Mvan_1328 NC_008726.1 1418820 1420271 D PFAM: aldehyde dehydrogenase; KEGG: bpe:BP0360 probable aldehyde dehydrogenase; aldehyde dehydrogenase 1418820..1420271 Mycobacterium vanbaalenii PYR-1 4643684 YP_952169.1 CDS Mvan_1329 NC_008726.1 1420291 1420647 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rxy:Rxyl_0167 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1420291..1420647 Mycobacterium vanbaalenii PYR-1 4643685 YP_952170.1 CDS Mvan_1330 NC_008726.1 1420647 1422200 D PFAM: gamma-glutamyltranspeptidase; KEGG: rxy:Rxyl_0295 gamma-glutamyltransferase; gamma-glutamyltransferase 1420647..1422200 Mycobacterium vanbaalenii PYR-1 4643686 YP_952171.1 CDS Mvan_1331 NC_008726.1 1422190 1422663 D PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_3438 translation initiation inhibitor; endoribonuclease L-PSP 1422190..1422663 Mycobacterium vanbaalenii PYR-1 4643687 YP_952172.1 CDS rplN NC_008726.1 1422850 1423218 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1422850..1423218 Mycobacterium vanbaalenii PYR-1 4643688 YP_952173.1 CDS rplX NC_008726.1 1423219 1423536 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1423219..1423536 Mycobacterium vanbaalenii PYR-1 4643689 YP_952174.1 CDS rplE NC_008726.1 1423538 1424104 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1423538..1424104 Mycobacterium vanbaalenii PYR-1 4643690 YP_952175.1 CDS rpsN NC_008726.1 1424109 1424294 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1424109..1424294 Mycobacterium vanbaalenii PYR-1 4643691 YP_952176.1 CDS rpsH NC_008726.1 1424389 1424787 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1424389..1424787 Mycobacterium vanbaalenii PYR-1 4643692 YP_952177.1 CDS rplF NC_008726.1 1424803 1425342 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1424803..1425342 Mycobacterium vanbaalenii PYR-1 4643693 YP_952178.1 CDS rplR NC_008726.1 1425346 1425759 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1425346..1425759 Mycobacterium vanbaalenii PYR-1 4643694 YP_952179.1 CDS rpsE NC_008726.1 1425791 1426468 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1425791..1426468 Mycobacterium vanbaalenii PYR-1 4643695 YP_952180.1 CDS rpmD NC_008726.1 1426472 1426651 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1426472..1426651 Mycobacterium vanbaalenii PYR-1 4643696 YP_952181.1 CDS rplO NC_008726.1 1426654 1427097 D late assembly protein; 50S ribosomal protein L15 1426654..1427097 Mycobacterium vanbaalenii PYR-1 4643697 YP_952182.1 CDS Mvan_1342 NC_008726.1 1427228 1427575 D PFAM: protein of unknown function DUF732; hypothetical protein 1427228..1427575 Mycobacterium vanbaalenii PYR-1 4643698 YP_952183.1 CDS Mvan_1343 NC_008726.1 1427607 1429391 D TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mmc:Mmcs_1042 signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type 1427607..1429391 Mycobacterium vanbaalenii PYR-1 4643699 YP_952184.1 CDS Mvan_1344 NC_008726.1 1429385 1430302 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP4189c hypothetical protein; putative methyltransferase complement(1429385..1430302) Mycobacterium vanbaalenii PYR-1 4643700 YP_952185.1 CDS Mvan_1345 NC_008726.1 1430307 1431227 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP4190c hypothetical protein; putative methyltransferase complement(1430307..1431227) Mycobacterium vanbaalenii PYR-1 4643701 YP_952186.1 CDS Mvan_1346 NC_008726.1 1431245 1432177 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_1045 protein of unknown function Mtu_121; putative methyltransferase complement(1431245..1432177) Mycobacterium vanbaalenii PYR-1 4643702 YP_952187.1 CDS secY NC_008726.1 1432436 1433773 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1432436..1433773 Mycobacterium vanbaalenii PYR-1 4643703 YP_952188.1 CDS adk NC_008726.1 1433770 1434315 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1433770..1434315 Mycobacterium vanbaalenii PYR-1 4643704 YP_952189.1 CDS Mvan_1349 NC_008726.1 1434316 1435113 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1434316..1435113 Mycobacterium vanbaalenii PYR-1 4643705 YP_952190.1 CDS Mvan_1350 NC_008726.1 1435183 1435698 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins; RNA polymerase sigma factor SigL 1435183..1435698 Mycobacterium vanbaalenii PYR-1 4643706 YP_952191.1 CDS Mvan_1351 NC_008726.1 1435695 1436411 D KEGG: mmc:Mmcs_1050 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 1435695..1436411 Mycobacterium vanbaalenii PYR-1 4643707 YP_952192.1 CDS Mvan_1352 NC_008726.1 1436483 1438141 D PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mpa:MAP4208 hypothetical protein; thiamine pyrophosphate binding domain-containing protein 1436483..1438141 Mycobacterium vanbaalenii PYR-1 4645993 YP_952193.1 CDS Mvan_1353 NC_008726.1 1438122 1438772 D KEGG: mpa:MAP4209 hypothetical protein; hypothetical protein 1438122..1438772 Mycobacterium vanbaalenii PYR-1 4645994 YP_952194.1 CDS Mvan_1354 NC_008726.1 1438780 1439796 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mpa:MAP4210 hypothetical protein; 3-oxoacyl-ACP synthase 1438780..1439796 Mycobacterium vanbaalenii PYR-1 4645995 YP_952195.1 CDS Mvan_1355 NC_008726.1 1439798 1440829 D PFAM: aminotransferase, class I and II; KEGG: mpa:MAP4211 hypothetical protein; class I/II aminotransferase 1439798..1440829 Mycobacterium vanbaalenii PYR-1 4645996 YP_952196.1 CDS Mvan_1356 NC_008726.1 1440838 1441335 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1051 transcriptional regulator, MarR family; MarR family transcriptional regulator 1440838..1441335 Mycobacterium vanbaalenii PYR-1 4645997 YP_952197.1 CDS Mvan_1357 NC_008726.1 1441338 1442549 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_1055 putative signal transduction histidine kinase; GAF sensor signal transduction histidine kinase complement(1441338..1442549) Mycobacterium vanbaalenii PYR-1 4645998 YP_952198.1 CDS Mvan_1358 NC_008726.1 1442546 1443208 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_1056 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(1442546..1443208) Mycobacterium vanbaalenii PYR-1 4645999 YP_952199.1 CDS Mvan_1359 NC_008726.1 1443313 1444080 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_1057 haloacid dehalogenase-like hydrolase; hydrolase 1443313..1444080 Mycobacterium vanbaalenii PYR-1 4646000 YP_952200.1 CDS Mvan_1360 NC_008726.1 1444158 1445030 R TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1062 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(1444158..1445030) Mycobacterium vanbaalenii PYR-1 4646001 YP_952201.1 CDS Mvan_1361 NC_008726.1 1445079 1446242 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1063 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(1445079..1446242) Mycobacterium vanbaalenii PYR-1 4646002 YP_952202.1 CDS Mvan_1362 NC_008726.1 1446251 1447855 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1064 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1446251..1447855) Mycobacterium vanbaalenii PYR-1 4646003 YP_952203.1 CDS Mvan_1363 NC_008726.1 1448128 1449537 D KEGG: ade:Adeh_0244 LigA; LigA protein 1448128..1449537 Mycobacterium vanbaalenii PYR-1 4646004 YP_952204.1 CDS Mvan_1364 NC_008726.1 1449520 1450143 R PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: mmc:Mmcs_1065 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1449520..1450143) Mycobacterium vanbaalenii PYR-1 4646005 YP_952205.1 CDS Mvan_1365 NC_008726.1 1450140 1451147 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mpa:MAP4225c dTDP-glucose-4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(1450140..1451147) Mycobacterium vanbaalenii PYR-1 4646006 YP_952206.1 CDS Mvan_1366 NC_008726.1 1451239 1451955 D KEGG: mmc:Mmcs_4282 LpqN; LpqN 1451239..1451955 Mycobacterium vanbaalenii PYR-1 4646007 YP_952207.1 CDS Mvan_1367 NC_008726.1 1451945 1452802 R KEGG: mmc:Mmcs_1067 hypothetical protein; hypothetical protein complement(1451945..1452802) Mycobacterium vanbaalenii PYR-1 4646008 YP_952208.1 CDS Mvan_1368 NC_008726.1 1452806 1453651 R KEGG: mmc:Mmcs_1068 hypothetical protein; hypothetical protein complement(1452806..1453651) Mycobacterium vanbaalenii PYR-1 4646009 YP_952209.1 CDS Mvan_1369 NC_008726.1 1453681 1455132 R PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_1069 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(1453681..1455132) Mycobacterium vanbaalenii PYR-1 4646010 YP_952210.1 CDS Mvan_1370 NC_008726.1 1455145 1456593 R PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: nfa:nfa52860 putative two-component system sensor kinase; cyclic nucleotide-binding protein complement(1455145..1456593) Mycobacterium vanbaalenii PYR-1 4646011 YP_952211.1 CDS Mvan_1371 NC_008726.1 1456602 1458350 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1070 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver modulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1456602..1458350) Mycobacterium vanbaalenii PYR-1 4646012 YP_952212.1 CDS Mvan_1372 NC_008726.1 1458425 1459276 D PFAM: UspA domain protein; KEGG: mmc:Mmcs_0990 UspA; UspA domain-containing protein 1458425..1459276 Mycobacterium vanbaalenii PYR-1 4646013 YP_952213.1 CDS Mvan_1373 NC_008726.1 1459277 1459990 R KEGG: mmc:Mmcs_1080 hypothetical protein; hypothetical protein complement(1459277..1459990) Mycobacterium vanbaalenii PYR-1 4646014 YP_952214.1 CDS Mvan_1374 NC_008726.1 1460097 1460528 R PFAM: heat shock protein Hsp20; KEGG: mbo:Mb2057c heat shock protein HspX (alpha-crstallin homolog) (14 kDa antigen) (HSP16.3); heat shock protein Hsp20 complement(1460097..1460528) Mycobacterium vanbaalenii PYR-1 4646015 YP_952215.1 CDS Mvan_1375 NC_008726.1 1460673 1463273 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_2259 cation transporting P-type ATPase; P-type HAD superfamily ATPase 1460673..1463273 Mycobacterium vanbaalenii PYR-1 4646016 YP_952216.1 CDS Mvan_1376 NC_008726.1 1463307 1463936 D KEGG: mmc:Mmcs_1082 hypothetical protein; hypothetical protein 1463307..1463936 Mycobacterium vanbaalenii PYR-1 4646017 YP_952217.1 CDS Mvan_1377 NC_008726.1 1464016 1464810 D KEGG: mmc:Mmcs_1095 hypothetical protein; hypothetical protein 1464016..1464810 Mycobacterium vanbaalenii PYR-1 4644593 YP_952218.1 CDS Mvan_1378 NC_008726.1 1464828 1465721 D PFAM: UspA domain protein; KEGG: mmc:Mmcs_1104 UspA; UspA domain-containing protein 1464828..1465721 Mycobacterium vanbaalenii PYR-1 4644594 YP_952219.1 CDS Mvan_1379 NC_008726.1 1465741 1466331 D KEGG: mbo:Mb1762c probable conserved transmembrane protein; putative transmembrane protein 1465741..1466331 Mycobacterium vanbaalenii PYR-1 4644595 YP_952220.1 CDS Mvan_1380 NC_008726.1 1466354 1467400 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1073 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 1466354..1467400 Mycobacterium vanbaalenii PYR-1 4644596 YP_952221.1 CDS Mvan_1381 NC_008726.1 1467400 1468137 D PFAM: UspA domain protein; KEGG: mbo:Mb2657c hypothetical protein; UspA domain-containing protein 1467400..1468137 Mycobacterium vanbaalenii PYR-1 4644597 YP_952222.1 CDS Mvan_1382 NC_008726.1 1468148 1468990 R PFAM: UspA domain protein; KEGG: mbo:Mb2657c hypothetical protein; UspA domain-containing protein complement(1468148..1468990) Mycobacterium vanbaalenii PYR-1 4644598 YP_952223.1 CDS Mvan_1383 NC_008726.1 1468995 1469978 R KEGG: mtc:MT2091 hypothetical protein; hypothetical protein complement(1468995..1469978) Mycobacterium vanbaalenii PYR-1 4644599 YP_952224.1 CDS Mvan_1384 NC_008726.1 1470106 1471578 D KEGG: mmc:Mmcs_1074 hypothetical protein; hypothetical protein 1470106..1471578 Mycobacterium vanbaalenii PYR-1 4644600 YP_952225.1 CDS Mvan_1385 NC_008726.1 1471575 1473902 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_1079 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1471575..1473902) Mycobacterium vanbaalenii PYR-1 4644601 YP_952226.1 CDS Mvan_1386 NC_008726.1 1473902 1474783 R PFAM: UspA domain protein; KEGG: mbo:Mb2051c hypothetical protein; UspA domain-containing protein complement(1473902..1474783) Mycobacterium vanbaalenii PYR-1 4644602 YP_952227.1 CDS Mvan_1387 NC_008726.1 1474811 1475611 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_1087 UspA; UspA domain-containing protein complement(1474811..1475611) Mycobacterium vanbaalenii PYR-1 4644603 YP_952228.1 CDS Mvan_1388 NC_008726.1 1475686 1478280 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: fra:Francci3_2615 magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase complement(1475686..1478280) Mycobacterium vanbaalenii PYR-1 4644604 YP_952229.1 CDS Mvan_1389 NC_008726.1 1478354 1479298 R reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(1478354..1479298) Mycobacterium vanbaalenii PYR-1 4644605 YP_952230.1 CDS Mvan_1390 NC_008726.1 1479304 1480308 R TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: psb:Psyr_2685 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(1479304..1480308) Mycobacterium vanbaalenii PYR-1 4644606 YP_952231.1 CDS Mvan_1391 NC_008726.1 1480323 1481576 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(1480323..1481576) Mycobacterium vanbaalenii PYR-1 4644607 YP_952232.1 CDS Mvan_1392 NC_008726.1 1481576 1483066 R TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_4385 arginine/ornithine antiporter; arginine/ornithine antiporter complement(1481576..1483066) Mycobacterium vanbaalenii PYR-1 4644608 YP_952233.1 CDS Mvan_1393 NC_008726.1 1483421 1485466 D PFAM: phosphoribosyltransferase; Erythromycin esterase; KEGG: mmc:Mmcs_1081 erythromycin esterase; erythromycin esterase 1483421..1485466 Mycobacterium vanbaalenii PYR-1 4644609 YP_952234.1 CDS Mvan_1394 NC_008726.1 1485463 1486407 D PFAM: PfkB domain protein; KEGG: mbo:Mb2054c probable phosphofructokinase PfkB (phosphohexokinase); ribokinase-like domain-containing protein 1485463..1486407 Mycobacterium vanbaalenii PYR-1 4644610 YP_952235.1 CDS Mvan_1395 NC_008726.1 1486501 1488180 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mtc:MT2086 GAF family protein; GAF sensor signal transduction histidine kinase 1486501..1488180 Mycobacterium vanbaalenii PYR-1 4644611 YP_952236.1 CDS Mvan_1396 NC_008726.1 1488090 1488833 R PFAM: regulatory protein, TetR; KEGG: mbo:Mb1251c probable transcriptional regulatory protein; TetR family transcriptional regulator complement(1488090..1488833) Mycobacterium vanbaalenii PYR-1 4644612 YP_952237.1 CDS Mvan_1397 NC_008726.1 1488964 1489221 R KEGG: mpa:MAP2728 hypothetical protein; hypothetical protein complement(1488964..1489221) Mycobacterium vanbaalenii PYR-1 4644613 YP_952238.1 CDS Mvan_1398 NC_008726.1 1489407 1491503 D TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit, N terminal domain protein; KEGG: mtu:Rv0570 ribonucleoside-diphosphate reductase alpha chain; ribonucleoside-diphosphate reductase 1489407..1491503 Mycobacterium vanbaalenii PYR-1 4644614 YP_952239.1 CDS Mvan_1399 NC_008726.1 1491513 1492142 R KEGG: mbo:Mb0586c hypothetical protein; hypothetical protein complement(1491513..1492142) Mycobacterium vanbaalenii PYR-1 4644615 YP_952240.1 CDS Mvan_1400 NC_008726.1 1492166 1492621 R KEGG: mmc:Mmcs_1086 hypothetical protein; hypothetical protein complement(1492166..1492621) Mycobacterium vanbaalenii PYR-1 4644616 YP_952241.1 CDS Mvan_1401 NC_008726.1 1492618 1493046 R PFAM: CBS domain containing protein; KEGG: mbo:Mb2659c hypothetical protein; signal-transduction protein complement(1492618..1493046) Mycobacterium vanbaalenii PYR-1 4644617 YP_952242.1 CDS Mvan_1402 NC_008726.1 1493225 1494052 D PFAM: UspA domain protein; KEGG: mmc:Mmcs_3621 UspA; UspA domain-containing protein 1493225..1494052 Mycobacterium vanbaalenii PYR-1 4646422 YP_952243.1 CDS Mvan_1403 NC_008726.1 1494156 1494581 D KEGG: ttj:TTHA1432 hypothetical protein; hypothetical protein 1494156..1494581 Mycobacterium vanbaalenii PYR-1 4646423 YP_952244.1 CDS Mvan_1404 NC_008726.1 1494568 1495674 R KEGG: mbo:Mb2662 hypothetical protein; hypothetical protein complement(1494568..1495674) Mycobacterium vanbaalenii PYR-1 4646424 YP_952245.1 CDS Mvan_1405 NC_008726.1 1495664 1496095 R KEGG: mmc:Mmcs_1088 hypothetical protein; hypothetical protein complement(1495664..1496095) Mycobacterium vanbaalenii PYR-1 4646425 YP_952246.1 CDS Mvan_1406 NC_008726.1 1496256 1496528 D KEGG: mmc:Mmcs_1089 hypothetical protein; hypothetical protein 1496256..1496528 Mycobacterium vanbaalenii PYR-1 4646426 YP_952247.1 CDS Mvan_1407 NC_008726.1 1496525 1498321 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1496525..1498321 Mycobacterium vanbaalenii PYR-1 4646427 YP_952248.1 CDS Mvan_1408 NC_008726.1 1498321 1499292 D PFAM: dehydrogenase, E1 component; KEGG: mmc:Mmcs_1091 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase 1498321..1499292 Mycobacterium vanbaalenii PYR-1 4646428 YP_952249.1 CDS Mvan_1409 NC_008726.1 1499289 1500266 D PFAM: Transketolase, central region; Transketolase domain protein; KEGG: mmc:Mmcs_1092 transketolase, central region; transketolase, central region 1499289..1500266 Mycobacterium vanbaalenii PYR-1 4646429 YP_952250.1 CDS Mvan_1410 NC_008726.1 1500263 1501606 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mmc:Mmcs_1093 catalytic domain of components of various dehydrogenase complexes; branched-chain alpha-keto acid dehydrogenase subunit E2 1500263..1501606 Mycobacterium vanbaalenii PYR-1 4646430 YP_952251.1 CDS Mvan_1411 NC_008726.1 1501612 1501866 D KEGG: mmc:Mmcs_1094 phosphopantetheine-binding protein; phosphopantetheine-binding protein 1501612..1501866 Mycobacterium vanbaalenii PYR-1 4646431 YP_952252.1 CDS Mvan_1412 NC_008726.1 1501881 1503032 D PFAM: CBS domain containing protein; peptidase M50; KEGG: mbo:Mb2658c probable conserved transmembrane alanine and leucine rich protein; peptidase M50 1501881..1503032 Mycobacterium vanbaalenii PYR-1 4646432 YP_952253.1 CDS Mvan_1413 NC_008726.1 1503128 1504834 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mpa:MAP3270c hypothetical protein; GAF sensor signal transduction histidine kinase 1503128..1504834 Mycobacterium vanbaalenii PYR-1 4646433 YP_952254.1 CDS Mvan_1414 NC_008726.1 1505154 1505432 D KEGG: mbo:Mb1767 hypothetical protein; hypothetical protein 1505154..1505432 Mycobacterium vanbaalenii PYR-1 4646434 YP_952255.1 CDS Mvan_1415 NC_008726.1 1505637 1506524 D PFAM: UspA domain protein; KEGG: mmc:Mmcs_1097 UspA; UspA domain-containing protein 1505637..1506524 Mycobacterium vanbaalenii PYR-1 4646435 YP_952256.1 CDS Mvan_1416 NC_008726.1 1506521 1507039 D KEGG: mmc:Mmcs_1098 hypothetical protein; hypothetical protein 1506521..1507039 Mycobacterium vanbaalenii PYR-1 4646436 YP_952257.1 CDS Mvan_1417 NC_008726.1 1507014 1507979 R PFAM: alpha/beta hydrolase fold; peptidase S15; KEGG: tfu:Tfu_0267 conserved hypothetical protein; peptidase S15 complement(1507014..1507979) Mycobacterium vanbaalenii PYR-1 4646437 YP_952258.1 CDS Mvan_1418 NC_008726.1 1508042 1509274 D KEGG: mmc:Mmcs_4257 hypothetical protein; hypothetical protein 1508042..1509274 Mycobacterium vanbaalenii PYR-1 4646438 YP_952259.1 CDS Mvan_1419 NC_008726.1 1509283 1510017 D PFAM: zinc/iron permease; KEGG: sat:SYN_01162 zinc transporter; zinc/iron permease 1509283..1510017 Mycobacterium vanbaalenii PYR-1 4646439 YP_952260.1 CDS Mvan_1420 NC_008726.1 1510070 1510792 D alkyl hydroperoxidase; catalyze the reduction of hydrogen peroxide to water and the reduction of alkyl hydroperoxides to the corresponding alcohols; peroxiredoxin 1510070..1510792 Mycobacterium vanbaalenii PYR-1 4646440 YP_952261.1 CDS Mvan_1421 NC_008726.1 1510904 1512358 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; CHASE3 domain protein; KEGG: tfu:Tfu_3046 GAF:ATP-binding region, ATPase-like; ATPase domain-containing protein 1510904..1512358 Mycobacterium vanbaalenii PYR-1 4646441 YP_952262.1 CDS Mvan_1422 NC_008726.1 1512362 1513633 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_1099 protein of unknown function DUF21; hypothetical protein 1512362..1513633 Mycobacterium vanbaalenii PYR-1 4646442 YP_952263.1 CDS Mvan_1423 NC_008726.1 1513643 1515295 D KEGG: mmc:Mmcs_1100 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; SMART: AAA ATPase; HAD family hydrolase 1513643..1515295 Mycobacterium vanbaalenii PYR-1 4646443 YP_952264.1 CDS Mvan_1424 NC_008726.1 1515274 1516974 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pca:Pcar_0062 Kef-type K+ transport system predicted NAD-binding component-like; sodium/hydrogen exchanger complement(1515274..1516974) Mycobacterium vanbaalenii PYR-1 4646444 YP_952265.1 CDS Mvan_1425 NC_008726.1 1517023 1517916 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_1102 UspA; UspA domain-containing protein complement(1517023..1517916) Mycobacterium vanbaalenii PYR-1 4646445 YP_952266.1 CDS Mvan_1426 NC_008726.1 1518078 1519079 R PFAM: CBS domain containing protein; MgtE integral membrane region; KEGG: mmc:Mmcs_1103 CBS domain containing protein; MgtE integral membrane protein complement(1518078..1519079) Mycobacterium vanbaalenii PYR-1 4646446 YP_952267.1 CDS Mvan_1427 NC_008726.1 1519263 1519901 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_4126 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1519263..1519901 Mycobacterium vanbaalenii PYR-1 4647098 YP_952268.1 CDS Mvan_1428 NC_008726.1 1519898 1521331 R PFAM: band 7 protein; KEGG: gka:GK0340 epidermal surface antigen; hypothetical protein complement(1519898..1521331) Mycobacterium vanbaalenii PYR-1 4647099 YP_952269.1 CDS Mvan_1429 NC_008726.1 1521336 1521878 R hypothetical protein complement(1521336..1521878) Mycobacterium vanbaalenii PYR-1 4647100 YP_952270.1 CDS Mvan_1430 NC_008726.1 1521953 1523653 D TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mbo:Mb1768c probable sulphate-transport transmembrane protein ABC transporter; sulfate transporter 1521953..1523653 Mycobacterium vanbaalenii PYR-1 4647101 YP_952271.1 CDS infA NC_008726.1 1523864 1524085 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1523864..1524085 Mycobacterium vanbaalenii PYR-1 4647102 YP_952272.1 CDS rpmJ NC_008726.1 1524132 1524245 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1524132..1524245 Mycobacterium vanbaalenii PYR-1 4647103 YP_952273.1 CDS rpsM NC_008726.1 1524428 1524802 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1524428..1524802 Mycobacterium vanbaalenii PYR-1 4647104 YP_952274.1 CDS Mvan_1434 NC_008726.1 1524809 1525222 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1524809..1525222 Mycobacterium vanbaalenii PYR-1 4647105 YP_952275.1 CDS rpsD NC_008726.1 1525241 1525846 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1525241..1525846 Mycobacterium vanbaalenii PYR-1 4647106 YP_952276.1 CDS Mvan_1436 NC_008726.1 1525930 1526982 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1525930..1526982 Mycobacterium vanbaalenii PYR-1 4647107 YP_952277.1 CDS rplQ NC_008726.1 1527069 1527677 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1527069..1527677 Mycobacterium vanbaalenii PYR-1 4647108 YP_952278.1 CDS truA NC_008726.1 1527685 1528584 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1527685..1528584 Mycobacterium vanbaalenii PYR-1 4647109 YP_952279.1 CDS Mvan_1439 NC_008726.1 1528585 1529247 R PFAM: cutinase; KEGG: mmc:Mmcs_1116 cutinase; cutinase complement(1528585..1529247) Mycobacterium vanbaalenii PYR-1 4647110 YP_952280.1 CDS Mvan_1440 NC_008726.1 1529276 1529944 R PFAM: cutinase; KEGG: mmc:Mmcs_1117 cutinase; cutinase complement(1529276..1529944) Mycobacterium vanbaalenii PYR-1 4647111 YP_952281.1 CDS Mvan_1441 NC_008726.1 1529969 1530634 R PFAM: cutinase; KEGG: mbo:Mb3482 probable cutinase precursor CUT4; cutinase complement(1529969..1530634) Mycobacterium vanbaalenii PYR-1 4647112 YP_952282.1 CDS Mvan_1442 NC_008726.1 1530660 1531688 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_1118 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1530660..1531688) Mycobacterium vanbaalenii PYR-1 4647113 YP_952283.1 CDS Mvan_1443 NC_008726.1 1531778 1532329 D PFAM: protein of unknown function DUF1470; KEGG: mmc:Mmcs_1119 protein of unknown function DUF1470; hypothetical protein 1531778..1532329 Mycobacterium vanbaalenii PYR-1 4647114 YP_952284.1 CDS Mvan_1444 NC_008726.1 1532374 1533759 D PFAM: protein of unknown function DUF690; KEGG: mmc:Mmcs_1123 protein of unknown function DUF690; hypothetical protein 1532374..1533759 Mycobacterium vanbaalenii PYR-1 4647115 YP_952285.1 CDS Mvan_1445 NC_008726.1 1533727 1535061 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_1124 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(1533727..1535061) Mycobacterium vanbaalenii PYR-1 4647116 YP_952286.1 CDS Mvan_1446 NC_008726.1 1535058 1536401 R KEGG: mmc:Mmcs_1125 hypothetical protein; hypothetical protein complement(1535058..1536401) Mycobacterium vanbaalenii PYR-1 4647117 YP_952287.1 CDS Mvan_1448 NC_008726.1 1537760 1539163 D PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: mmc:Mmcs_3816 recombinase; recombinase 1537760..1539163 Mycobacterium vanbaalenii PYR-1 4647119 YP_952288.1 CDS Mvan_1449 NC_008726.1 1540101 1540451 D KEGG: mtc:MT2733 hypothetical protein; hypothetical protein 1540101..1540451 Mycobacterium vanbaalenii PYR-1 4647120 YP_952289.1 CDS Mvan_1450 NC_008726.1 1540448 1541779 D KEGG: mtc:MT2732 hypothetical protein; hypothetical protein 1540448..1541779 Mycobacterium vanbaalenii PYR-1 4647121 YP_952290.1 CDS Mvan_1451 NC_008726.1 1541946 1542524 D hypothetical protein 1541946..1542524 Mycobacterium vanbaalenii PYR-1 4647122 YP_952291.1 CDS Mvan_1452 NC_008726.1 1542517 1542807 D hypothetical protein 1542517..1542807 Mycobacterium vanbaalenii PYR-1 4643309 YP_952292.1 CDS Mvan_1453 NC_008726.1 1542788 1543156 D KEGG: nfa:nfa2460 hypothetical protein; hypothetical protein 1542788..1543156 Mycobacterium vanbaalenii PYR-1 4643310 YP_952293.1 CDS Mvan_1454 NC_008726.1 1543143 1543871 D hypothetical protein 1543143..1543871 Mycobacterium vanbaalenii PYR-1 4643311 YP_952294.1 CDS Mvan_1455 NC_008726.1 1544056 1544406 D KEGG: nfa:nfa15200 hypothetical protein; hypothetical protein 1544056..1544406 Mycobacterium vanbaalenii PYR-1 4643312 YP_952295.1 CDS Mvan_1456 NC_008726.1 1544732 1545043 D hypothetical protein 1544732..1545043 Mycobacterium vanbaalenii PYR-1 4643313 YP_952296.1 CDS Mvan_1457 NC_008726.1 1545021 1549250 D TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Transglycosylase domain protein; KEGG: nfa:nfa15380 putative phage tail; TP901 family phage tail tape measure protein 1545021..1549250 Mycobacterium vanbaalenii PYR-1 4643314 YP_952297.1 CDS Mvan_1458 NC_008726.1 1550203 1551081 D hypothetical protein 1550203..1551081 Mycobacterium vanbaalenii PYR-1 4643315 YP_952298.1 CDS Mvan_1459 NC_008726.1 1551557 1551826 D hypothetical protein 1551557..1551826 Mycobacterium vanbaalenii PYR-1 4643316 YP_952299.1 CDS Mvan_1460 NC_008726.1 1551844 1552455 R hypothetical protein complement(1551844..1552455) Mycobacterium vanbaalenii PYR-1 4643317 YP_952300.1 CDS Mvan_1461 NC_008726.1 1552452 1552823 R hypothetical protein complement(1552452..1552823) Mycobacterium vanbaalenii PYR-1 4643318 YP_952301.1 CDS Mvan_1463 NC_008726.1 1555110 1556219 D KEGG: mbo:Mb3476c hypothetical alanine and valine rich protein; hypothetical protein 1555110..1556219 Mycobacterium vanbaalenii PYR-1 4643320 YP_952302.1 CDS Mvan_1464 NC_008726.1 1556300 1556632 D KEGG: mmc:Mmcs_1128 hypothetical protein; hypothetical protein 1556300..1556632 Mycobacterium vanbaalenii PYR-1 4643321 YP_952303.1 CDS Mvan_1465 NC_008726.1 1556645 1556941 D KEGG: mmc:Mmcs_1129 hypothetical protein; hypothetical protein 1556645..1556941 Mycobacterium vanbaalenii PYR-1 4643322 YP_952304.1 CDS Mvan_1466 NC_008726.1 1557041 1558366 D PFAM: transcriptional regulator domain protein; GAF domain protein; KEGG: sma:SAV7178 transcriptional regulator; putative GAF sensor protein 1557041..1558366 Mycobacterium vanbaalenii PYR-1 4643323 YP_952305.1 CDS Mvan_1467 NC_008726.1 1558454 1559365 D KEGG: mmc:Mmcs_5135 lysophospholipase-like protein; lysophospholipase-like protein 1558454..1559365 Mycobacterium vanbaalenii PYR-1 4643324 YP_952306.1 CDS Mvan_1468 NC_008726.1 1559571 1561094 D PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP3952 aldehyde dehydrogenase; aldehyde dehydrogenase 1559571..1561094 Mycobacterium vanbaalenii PYR-1 4643325 YP_952307.1 CDS rplM NC_008726.1 1561408 1561851 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1561408..1561851 Mycobacterium vanbaalenii PYR-1 4643326 YP_952308.1 CDS rpsI NC_008726.1 1561848 1562363 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1561848..1562363 Mycobacterium vanbaalenii PYR-1 4643327 YP_952309.1 CDS Mvan_1471 NC_008726.1 1562642 1563121 D KEGG: mmc:Mmcs_1132 hypothetical protein; hypothetical protein 1562642..1563121 Mycobacterium vanbaalenii PYR-1 4643328 YP_952310.1 CDS glmM NC_008726.1 1563260 1564597 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1563260..1564597 Mycobacterium vanbaalenii PYR-1 4643329 YP_952311.1 CDS Mvan_1473 NC_008726.1 1564640 1564945 D KEGG: mmc:Mmcs_1135 hypothetical protein; hypothetical protein 1564640..1564945 Mycobacterium vanbaalenii PYR-1 4643330 YP_952312.1 CDS Mvan_1474 NC_008726.1 1564953 1566371 D KEGG: mbo:Mb3469c conserved hypothetical alanine and proline rich protein; hypothetical protein 1564953..1566371 Mycobacterium vanbaalenii PYR-1 4643331 YP_952313.1 CDS Mvan_1475 NC_008726.1 1566383 1566997 D hypothetical protein 1566383..1566997 Mycobacterium vanbaalenii PYR-1 4643332 YP_952314.1 CDS Mvan_1476 NC_008726.1 1566972 1568114 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa35480 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1566972..1568114) Mycobacterium vanbaalenii PYR-1 4643333 YP_952315.1 CDS Mvan_1477 NC_008726.1 1568158 1568733 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa35470 putative transcriptional regulator; TetR family transcriptional regulator 1568158..1568733 Mycobacterium vanbaalenii PYR-1 4645370 YP_952316.1 CDS Mvan_1478 NC_008726.1 1568805 1569845 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_1137 luciferase-like protein; luciferase family protein complement(1568805..1569845) Mycobacterium vanbaalenii PYR-1 4645371 YP_952317.1 CDS Mvan_1479 NC_008726.1 1569895 1570740 R KEGG: mmc:Mmcs_1138 hypothetical protein; hypothetical protein complement(1569895..1570740) Mycobacterium vanbaalenii PYR-1 4645372 YP_952318.1 CDS Mvan_1480 NC_008726.1 1570797 1572665 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1570797..1572665 Mycobacterium vanbaalenii PYR-1 4645373 YP_952319.1 CDS Mvan_1481 NC_008726.1 1572818 1573204 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP4309 hypothetical protein; anti-sigma-factor antagonist 1572818..1573204 Mycobacterium vanbaalenii PYR-1 4645374 YP_952320.1 CDS Mvan_1482 NC_008726.1 1573214 1574626 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: mpa:MAP4256 hypothetical protein; carbohydrate kinase 1573214..1574626 Mycobacterium vanbaalenii PYR-1 4645375 YP_952321.1 CDS Mvan_1483 NC_008726.1 1574637 1576028 D KEGG: mmc:Mmcs_1145 glutamate decarboxylase; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; glutamate decarboxylase 1574637..1576028 Mycobacterium vanbaalenii PYR-1 4645376 YP_952322.1 CDS alr NC_008726.1 1576055 1577227 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1576055..1577227 Mycobacterium vanbaalenii PYR-1 4645377 YP_952323.1 CDS Mvan_1485 NC_008726.1 1577224 1578312 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1147 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1577224..1578312 Mycobacterium vanbaalenii PYR-1 4645378 YP_952324.1 CDS Mvan_1486 NC_008726.1 1578305 1578769 D PFAM: protein of unknown function UPF0079; KEGG: mmc:Mmcs_1148 protein of unknown function UPF0079; hypothetical protein 1578305..1578769 Mycobacterium vanbaalenii PYR-1 4645379 YP_952325.1 CDS Mvan_1487 NC_008726.1 1578766 1579398 D PFAM: peptidase M22, glycoprotease; KEGG: mmc:Mmcs_1149 peptidase M22, glycoprotease; peptidase M22, glycoprotease 1578766..1579398 Mycobacterium vanbaalenii PYR-1 4645380 YP_952326.1 CDS Mvan_1488 NC_008726.1 1579395 1579847 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_1150 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 1579395..1579847 Mycobacterium vanbaalenii PYR-1 4645381 YP_952327.1 CDS Mvan_1489 NC_008726.1 1579844 1580866 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1579844..1580866 Mycobacterium vanbaalenii PYR-1 4645382 YP_952328.1 CDS Mvan_1490 NC_008726.1 1580863 1581309 D KEGG: mmc:Mmcs_1152 hypothetical protein; hypothetical protein 1580863..1581309 Mycobacterium vanbaalenii PYR-1 4645383 YP_952329.1 CDS Mvan_1491 NC_008726.1 1581299 1581589 R KEGG: mmc:Mmcs_3307 hypothetical protein; hypothetical protein complement(1581299..1581589) Mycobacterium vanbaalenii PYR-1 4645384 YP_952330.1 CDS Mvan_1492 NC_008726.1 1581753 1582355 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4496 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1581753..1582355) Mycobacterium vanbaalenii PYR-1 4645385 YP_952331.1 CDS Mvan_1493 NC_008726.1 1582464 1583195 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4495 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1582464..1583195 Mycobacterium vanbaalenii PYR-1 4645386 YP_952332.1 CDS groES NC_008726.1 1583612 1583914 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1583612..1583914 Mycobacterium vanbaalenii PYR-1 4645387 YP_952333.1 CDS groEL NC_008726.1 1584003 1585637 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 1584003..1585637 Mycobacterium vanbaalenii PYR-1 4645388 YP_952334.1 CDS Mvan_1496 NC_008726.1 1585858 1586211 D KEGG: ret:RHE_CH03101 hypothetical protein; hypothetical protein 1585858..1586211 Mycobacterium vanbaalenii PYR-1 4645389 YP_952335.1 CDS Mvan_1497 NC_008726.1 1586405 1586737 D KEGG: mmc:Mmcs_1157 hypothetical protein; hypothetical protein 1586405..1586737 Mycobacterium vanbaalenii PYR-1 4645390 YP_952336.1 CDS Mvan_1498 NC_008726.1 1586738 1587238 D PFAM: Lipocalin family protein; KEGG: mmc:Mmcs_1158 lipocalin-like protein; lipocalin family protein 1586738..1587238 Mycobacterium vanbaalenii PYR-1 4645391 YP_952337.1 CDS Mvan_1499 NC_008726.1 1587759 1588127 D KEGG: mpa:MAP2403c hypothetical protein; hypothetical protein 1587759..1588127 Mycobacterium vanbaalenii PYR-1 4645392 YP_952338.1 CDS Mvan_1500 NC_008726.1 1588155 1588772 R KEGG: mmc:Mmcs_1160 hypothetical protein; hypothetical protein complement(1588155..1588772) Mycobacterium vanbaalenii PYR-1 4645393 YP_952339.1 CDS Mvan_1501 NC_008726.1 1588950 1590005 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1588950..1590005 Mycobacterium vanbaalenii PYR-1 4645394 YP_952340.1 CDS Mvan_1502 NC_008726.1 1590088 1591026 D KEGG: nfa:nfa9170 hypothetical protein; hypothetical protein 1590088..1591026 Mycobacterium vanbaalenii PYR-1 4648360 YP_952341.1 CDS Mvan_1503 NC_008726.1 1591004 1591345 R KEGG: mmc:Mmcs_5259 hypothetical protein; hypothetical protein complement(1591004..1591345) Mycobacterium vanbaalenii PYR-1 4648361 YP_952342.1 CDS Mvan_1504 NC_008726.1 1591342 1592046 R PFAM: Nitrile hydratase alpha chain; KEGG: mmc:Mmcs_5258 thiocyanate hydrolase; thiocyanate hydrolase complement(1591342..1592046) Mycobacterium vanbaalenii PYR-1 4648362 YP_952343.1 CDS Mvan_1505 NC_008726.1 1592076 1592915 R KEGG: mmc:Mmcs_5257 hypothetical protein; hypothetical protein complement(1592076..1592915) Mycobacterium vanbaalenii PYR-1 4648363 YP_952344.1 CDS Mvan_1506 NC_008726.1 1593132 1593422 R PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_1162 transcription factor WhiB; transcription factor WhiB complement(1593132..1593422) Mycobacterium vanbaalenii PYR-1 4648364 YP_952345.1 CDS Mvan_1507 NC_008726.1 1593816 1594616 D KEGG: mmc:Mmcs_1163 hypothetical protein; hypothetical protein 1593816..1594616 Mycobacterium vanbaalenii PYR-1 4648365 YP_952346.1 CDS Mvan_1508 NC_008726.1 1594739 1595317 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase; RNA polymerase sigma factor SigD 1594739..1595317 Mycobacterium vanbaalenii PYR-1 4648366 YP_952347.1 CDS Mvan_1509 NC_008726.1 1595310 1596479 D KEGG: mmc:Mmcs_1165 hypothetical protein; hypothetical protein 1595310..1596479 Mycobacterium vanbaalenii PYR-1 4648367 YP_952348.1 CDS Mvan_1510 NC_008726.1 1596583 1596987 R KEGG: mmc:Mmcs_1166 hypothetical protein; hypothetical protein complement(1596583..1596987) Mycobacterium vanbaalenii PYR-1 4648368 YP_952349.1 CDS Mvan_1511 NC_008726.1 1597134 1598687 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1597134..1598687 Mycobacterium vanbaalenii PYR-1 4648369 YP_952350.1 CDS Mvan_1512 NC_008726.1 1598719 1599855 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 1598719..1599855 Mycobacterium vanbaalenii PYR-1 4648370 YP_952351.1 CDS Mvan_1513 NC_008726.1 1599868 1600458 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP1788 hypothetical protein; TetR family transcriptional regulator complement(1599868..1600458) Mycobacterium vanbaalenii PYR-1 4648371 YP_952352.1 CDS Mvan_1514 NC_008726.1 1600613 1602349 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: mbo:Mb3443c probable cholesterol oxidase precursor ChoD (cholesterol-O2 oxidoreductase); FAD dependent oxidoreductase 1600613..1602349 Mycobacterium vanbaalenii PYR-1 4648372 YP_952353.1 CDS Mvan_1515 NC_008726.1 1602615 1603295 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_3350 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1602615..1603295 Mycobacterium vanbaalenii PYR-1 4648373 YP_952354.1 CDS guaA NC_008726.1 1603470 1605038 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1603470..1605038 Mycobacterium vanbaalenii PYR-1 4648374 YP_952355.1 CDS Mvan_1517 NC_008726.1 1605040 1605603 R PFAM: TENA/THI-4 domain protein; KEGG: rxy:Rxyl_2792 transcriptional activator, TenA family; TenA family transcription regulator complement(1605040..1605603) Mycobacterium vanbaalenii PYR-1 4648375 YP_952356.1 CDS Mvan_1518 NC_008726.1 1605622 1606488 R PFAM: regulatory protein, MerR; KEGG: mpa:MAP2201 hypothetical protein; MerR family transcriptional regulator complement(1605622..1606488) Mycobacterium vanbaalenii PYR-1 4648376 YP_952357.1 CDS Mvan_1519 NC_008726.1 1606490 1607941 R PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP2200 hypothetical protein; FAD dependent oxidoreductase complement(1606490..1607941) Mycobacterium vanbaalenii PYR-1 4648377 YP_952358.1 CDS Mvan_1520 NC_008726.1 1607945 1608865 R KEGG: mpa:MAP2199 hypothetical protein; hypothetical protein complement(1607945..1608865) Mycobacterium vanbaalenii PYR-1 4648378 YP_952359.1 CDS Mvan_1521 NC_008726.1 1608877 1609704 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2198 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(1608877..1609704) Mycobacterium vanbaalenii PYR-1 4648379 YP_952360.1 CDS Mvan_1522 NC_008726.1 1609871 1610578 D KEGG: mmc:Mmcs_1174 hypothetical protein; hypothetical protein 1609871..1610578 Mycobacterium vanbaalenii PYR-1 4648380 YP_952361.1 CDS Mvan_1523 NC_008726.1 1610580 1612148 D KEGG: mmc:Mmcs_1175 hypothetical protein; hypothetical protein 1610580..1612148 Mycobacterium vanbaalenii PYR-1 4648381 YP_952362.1 CDS Mvan_1524 NC_008726.1 1612197 1612646 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1176 transcriptional regulator, TrmB; MarR family transcriptional regulator 1612197..1612646 Mycobacterium vanbaalenii PYR-1 4648382 YP_952363.1 CDS Mvan_1525 NC_008726.1 1612639 1613064 D PFAM: OsmC family protein; KEGG: mmc:Mmcs_1177 OsmC-like protein; OsmC family protein 1612639..1613064 Mycobacterium vanbaalenii PYR-1 4648383 YP_952364.1 CDS Mvan_1526 NC_008726.1 1613051 1614100 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: mmc:Mmcs_1178 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase complement(1613051..1614100) Mycobacterium vanbaalenii PYR-1 4648384 YP_952365.1 CDS Mvan_1527 NC_008726.1 1614097 1616058 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: mpa:MAP3482 short chain dehydrogenase; short chain dehydrogenase complement(1614097..1616058) Mycobacterium vanbaalenii PYR-1 4648260 YP_952366.1 CDS Mvan_1528 NC_008726.1 1616162 1617028 D PFAM: MaoC domain protein dehydratase; KEGG: mpa:MAP3479c hypothetical protein; dehydratase 1616162..1617028 Mycobacterium vanbaalenii PYR-1 4648261 YP_952367.1 CDS dnaE2 NC_008726.1 1618327 1621623 D DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 1618327..1621623 Mycobacterium vanbaalenii PYR-1 4648263 YP_952368.1 CDS Mvan_1531 NC_008726.1 1621712 1622911 R PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5; integrase catalytic subunit complement(1621712..1622911) Mycobacterium vanbaalenii PYR-1 4648264 YP_952369.1 CDS Mvan_1532 NC_008726.1 1623019 1623660 D PFAM: nitroreductase; KEGG: mmc:Mmcs_1184 nitroreductase; nitroreductase 1623019..1623660 Mycobacterium vanbaalenii PYR-1 4648265 YP_952370.1 CDS Mvan_1533 NC_008726.1 1623667 1624131 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mmc:Mmcs_1186 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(1623667..1624131) Mycobacterium vanbaalenii PYR-1 4648266 YP_952371.1 CDS Mvan_1534 NC_008726.1 1624149 1624754 D PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1188 methyltransferase type 11; type 12 methyltransferase 1624149..1624754 Mycobacterium vanbaalenii PYR-1 4648267 YP_952372.1 CDS Mvan_1535 NC_008726.1 1624759 1624911 R hypothetical protein complement(1624759..1624911) Mycobacterium vanbaalenii PYR-1 4648268 YP_952373.1 CDS Mvan_1536 NC_008726.1 1625204 1627786 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_1189 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1625204..1627786 Mycobacterium vanbaalenii PYR-1 4648269 YP_952374.1 CDS Mvan_1537 NC_008726.1 1627783 1628172 D PFAM: Roadblock/LC7 family protein; KEGG: mmc:Mmcs_1190 roadblock/LC7; roadblock/LC7 family protein 1627783..1628172 Mycobacterium vanbaalenii PYR-1 4648270 YP_952375.1 CDS Mvan_1538 NC_008726.1 1628180 1628557 D PFAM: protein of unknown function DUF742; KEGG: mmc:Mmcs_1191 protein of unknown function DUF742; hypothetical protein 1628180..1628557 Mycobacterium vanbaalenii PYR-1 4648271 YP_952376.1 CDS Mvan_1539 NC_008726.1 1628538 1629104 D PFAM: protein of unknown function, ATP binding; KEGG: mmc:Mmcs_1192 protein of unknown function, ATP binding protein; hypothetical protein 1628538..1629104 Mycobacterium vanbaalenii PYR-1 4648272 YP_952377.1 CDS Mvan_1540 NC_008726.1 1629105 1629656 D PFAM: pentapeptide repeat protein; KEGG: mmc:Mmcs_1193 pentapeptide repeat; pentapeptide repeat-containing protein 1629105..1629656 Mycobacterium vanbaalenii PYR-1 4648273 YP_952378.1 CDS Mvan_1541 NC_008726.1 1629780 1631003 D PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_0916 oxidoreductase FAD-binding region; 6,7-dihydropteridine reductase 1629780..1631003 Mycobacterium vanbaalenii PYR-1 4648274 YP_952379.1 CDS Mvan_1543 NC_008726.1 1631806 1632885 D KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein 1631806..1632885 Mycobacterium vanbaalenii PYR-1 4648276 YP_952380.1 CDS Mvan_1544 NC_008726.1 1633139 1633438 D KEGG: mmc:Mmcs_0410 hypothetical protein; hypothetical protein 1633139..1633438 Mycobacterium vanbaalenii PYR-1 4648277 YP_952381.1 CDS Mvan_1545 NC_008726.1 1633577 1634137 R KEGG: nfa:nfa52220 putative transcriptional regulator; hypothetical protein complement(1633577..1634137) Mycobacterium vanbaalenii PYR-1 4648278 YP_952382.1 CDS Mvan_1546 NC_008726.1 1634271 1636856 R PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mmc:Mmcs_1201 FHA domain containing protein; ABC transporter--like protein complement(1634271..1636856) Mycobacterium vanbaalenii PYR-1 4648279 YP_952383.1 CDS Mvan_1547 NC_008726.1 1636878 1637309 R KEGG: cvi:CV2861 hypothetical protein; hypothetical protein complement(1636878..1637309) Mycobacterium vanbaalenii PYR-1 4648280 YP_952384.1 CDS Mvan_1548 NC_008726.1 1637358 1637921 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa47790 putative transcriptional regulator; TetR family transcriptional regulator 1637358..1637921 Mycobacterium vanbaalenii PYR-1 4648281 YP_952385.1 CDS Mvan_1549 NC_008726.1 1637905 1639113 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_1203 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1637905..1639113) Mycobacterium vanbaalenii PYR-1 4648282 YP_952386.1 CDS Mvan_1550 NC_008726.1 1639151 1640017 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1639151..1640017 Mycobacterium vanbaalenii PYR-1 4648283 YP_952387.1 CDS Mvan_1551 NC_008726.1 1640014 1640307 D KEGG: mmc:Mmcs_1205 hypothetical protein; hypothetical protein 1640014..1640307 Mycobacterium vanbaalenii PYR-1 4648284 YP_952388.1 CDS Mvan_1552 NC_008726.1 1640389 1641117 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1206 methyltransferase type 11; type 11 methyltransferase complement(1640389..1641117) Mycobacterium vanbaalenii PYR-1 4647691 YP_952389.1 CDS metX NC_008726.1 1641114 1642241 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(1641114..1642241) Mycobacterium vanbaalenii PYR-1 4647692 YP_952390.1 CDS Mvan_1554 NC_008726.1 1642241 1643584 R catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase complement(1642241..1643584) Mycobacterium vanbaalenii PYR-1 4647693 YP_952391.1 CDS Mvan_1555 NC_008726.1 1643804 1644661 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1210 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1643804..1644661) Mycobacterium vanbaalenii PYR-1 4647694 YP_952392.1 CDS Mvan_1556 NC_008726.1 1644735 1645547 D KEGG: mmc:Mmcs_1211 exodeoxyribonuclease III (xth); TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1644735..1645547 Mycobacterium vanbaalenii PYR-1 4647695 YP_952393.1 CDS Mvan_1557 NC_008726.1 1645569 1646600 R hypothetical protein complement(1645569..1646600) Mycobacterium vanbaalenii PYR-1 4647696 YP_952394.1 CDS Mvan_1558 NC_008726.1 1646605 1647207 R KEGG: mmc:Mmcs_2150 hypothetical protein; hypothetical protein complement(1646605..1647207) Mycobacterium vanbaalenii PYR-1 4647697 YP_952395.1 CDS Mvan_1559 NC_008726.1 1647259 1647687 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_2149 transcriptional regulator, MarR family; MarR family transcriptional regulator 1647259..1647687 Mycobacterium vanbaalenii PYR-1 4647698 YP_952396.1 CDS Mvan_1560 NC_008726.1 1647710 1648735 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1647710..1648735 Mycobacterium vanbaalenii PYR-1 4647699 YP_952397.1 CDS Mvan_1561 NC_008726.1 1648749 1649792 D TIGRFAM: putative ribonuclease; PFAM: ribonuclease BN; KEGG: mmc:Mmcs_1213 hypothetical protein; putative ribonuclease 1648749..1649792 Mycobacterium vanbaalenii PYR-1 4647700 YP_952398.1 CDS Mvan_1562 NC_008726.1 1649789 1651000 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1216 serine-type D-Ala-D-Ala carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase complement(1649789..1651000) Mycobacterium vanbaalenii PYR-1 4647701 YP_952399.1 CDS Mvan_1563 NC_008726.1 1651421 1653037 R activates fatty acids by binding to coenzyme A; AMP-binding domain-containing protein complement(1651421..1653037) Mycobacterium vanbaalenii PYR-1 4647702 YP_952400.1 CDS Mvan_1564 NC_008726.1 1653034 1654734 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4438 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1653034..1654734) Mycobacterium vanbaalenii PYR-1 4647703 YP_952401.1 CDS Mvan_1565 NC_008726.1 1654796 1655641 D PFAM: regulatory protein, LuxR; KEGG: mmc:Mmcs_4439 ATP-dependent transcriptional regulator, MalT-like, LuxR family; response regulator receiver protein 1654796..1655641 Mycobacterium vanbaalenii PYR-1 4647704 YP_952402.1 CDS Mvan_1566 NC_008726.1 1655702 1655992 R hypothetical protein complement(1655702..1655992) Mycobacterium vanbaalenii PYR-1 4647705 YP_952403.1 CDS Mvan_1567 NC_008726.1 1656143 1656967 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1286 chloride peroxidase; chloride peroxidase 1656143..1656967 Mycobacterium vanbaalenii PYR-1 4647706 YP_952404.1 CDS Mvan_1568 NC_008726.1 1657043 1658026 R PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_1217 strictosidine synthase; strictosidine synthase complement(1657043..1658026) Mycobacterium vanbaalenii PYR-1 4647707 YP_952405.1 CDS Mvan_1569 NC_008726.1 1658147 1659805 D KEGG: mbo:Mb0545 PE-PGRS family protein [first part]; hypothetical protein 1658147..1659805 Mycobacterium vanbaalenii PYR-1 4647708 YP_952406.1 CDS Mvan_1570 NC_008726.1 1659922 1661307 R PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_1218 aminotransferase class-III; hypothetical protein complement(1659922..1661307) Mycobacterium vanbaalenii PYR-1 4647709 YP_952407.1 CDS Mvan_1571 NC_008726.1 1661304 1661825 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1219 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1661304..1661825) Mycobacterium vanbaalenii PYR-1 4647710 YP_952408.2 CDS Mvan_1572 NC_008726.1 1661972 1663444 D catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1661972..1663444 Mycobacterium vanbaalenii PYR-1 4647711 YP_952409.1 CDS Mvan_1573 NC_008726.1 1663555 1664415 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_1181 UspA; UspA domain-containing protein complement(1663555..1664415) Mycobacterium vanbaalenii PYR-1 4647712 YP_952410.1 CDS Mvan_1574 NC_008726.1 1664432 1665943 R PFAM: amino acid permease-associated region; KEGG: amino acid transporter, putative; amino acid permease-associated protein complement(1664432..1665943) Mycobacterium vanbaalenii PYR-1 4647713 YP_952411.1 CDS Mvan_1575 NC_008726.1 1666057 1666953 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 1666057..1666953 Mycobacterium vanbaalenii PYR-1 4647714 YP_952412.1 CDS Mvan_1576 NC_008726.1 1666931 1667545 R KEGG: mpa:MAP3445 hypothetical protein; hypothetical protein complement(1666931..1667545) Mycobacterium vanbaalenii PYR-1 4647715 YP_952413.1 CDS Mvan_1577 NC_008726.1 1667616 1671083 D PFAM: Polyprenyl synthetase; MMPL domain protein; KEGG: mmc:Mmcs_4064 MmpL; polyprenyl synthetase 1667616..1671083 Mycobacterium vanbaalenii PYR-1 4648618 YP_952414.1 CDS Mvan_1578 NC_008726.1 1671086 1672600 D TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5075 amine oxidase; phytoene dehydrogenase--like protein 1671086..1672600 Mycobacterium vanbaalenii PYR-1 4648619 YP_952415.1 CDS Mvan_1579 NC_008726.1 1672600 1673547 D PFAM: Squalene/phytoene synthase; KEGG: mmc:Mmcs_5076 squalene/phytoene synthase; squalene/phytoene synthase 1672600..1673547 Mycobacterium vanbaalenii PYR-1 4648620 YP_952416.1 CDS Mvan_1580 NC_008726.1 1673675 1675120 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5080 amine oxidase; amine oxidase 1673675..1675120 Mycobacterium vanbaalenii PYR-1 4648621 YP_952417.1 CDS Mvan_1581 NC_008726.1 1675117 1676124 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_5081 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1675117..1676124 Mycobacterium vanbaalenii PYR-1 4648622 YP_952418.1 CDS Mvan_1582 NC_008726.1 1676121 1676666 R catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; isopentenyl-diphosphate delta-isomerase complement(1676121..1676666) Mycobacterium vanbaalenii PYR-1 4648623 YP_952419.1 CDS Mvan_1583 NC_008726.1 1676834 1677244 D PFAM: transposase IS200-family protein; KEGG: tfu:Tfu_1323 transposase-related protein; transposase IS200 family protein 1676834..1677244 Mycobacterium vanbaalenii PYR-1 4648624 YP_952420.1 CDS Mvan_1584 NC_008726.1 1677249 1678502 D PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: tfu:Tfu_1324 transposase, IS605 OrfB; IS891/IS1136/IS1341 family transposase 1677249..1678502 Mycobacterium vanbaalenii PYR-1 4648625 YP_952421.1 CDS sdhB NC_008726.1 1679601 1680371 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(1679601..1680371) Mycobacterium vanbaalenii PYR-1 4648627 YP_952422.1 CDS sdhA NC_008726.1 1680436 1682190 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(1680436..1682190) Mycobacterium vanbaalenii PYR-1 4648628 YP_952423.1 CDS Mvan_1588 NC_008726.1 1682204 1682695 R KEGG: mmc:Mmcs_1229 putative succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase); putative succinate dehydrogenase complement(1682204..1682695) Mycobacterium vanbaalenii PYR-1 4648629 YP_952424.1 CDS Mvan_1589 NC_008726.1 1682692 1683120 R PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mmc:Mmcs_1230 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit complement(1682692..1683120) Mycobacterium vanbaalenii PYR-1 4648630 YP_952425.1 CDS Mvan_1590 NC_008726.1 1683340 1683762 D Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1683340..1683762 Mycobacterium vanbaalenii PYR-1 4648631 YP_952426.1 CDS deoA NC_008726.1 1683759 1685060 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 1683759..1685060 Mycobacterium vanbaalenii PYR-1 4648632 YP_952427.1 CDS Mvan_1592 NC_008726.1 1685070 1686158 D catalyzes the formation of inosine from adenosine; adenosine deaminase 1685070..1686158 Mycobacterium vanbaalenii PYR-1 4648633 YP_952428.1 CDS Mvan_1593 NC_008726.1 1686208 1687494 R KEGG: mmc:Mmcs_1234 hypothetical protein; hypothetical protein complement(1686208..1687494) Mycobacterium vanbaalenii PYR-1 4648634 YP_952429.1 CDS Mvan_1594 NC_008726.1 1687561 1689414 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3602 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1687561..1689414 Mycobacterium vanbaalenii PYR-1 4648635 YP_952430.1 CDS Mvan_1595 NC_008726.1 1689424 1690266 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_4618 protein of unknown function DUF140; hypothetical protein complement(1689424..1690266) Mycobacterium vanbaalenii PYR-1 4648636 YP_952431.1 CDS Mvan_1596 NC_008726.1 1690418 1690801 D hypothetical protein 1690418..1690801 Mycobacterium vanbaalenii PYR-1 4648637 YP_952432.1 CDS Mvan_1597 NC_008726.1 1690814 1693510 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_0415 hypothetical protein; hypothetical protein complement(1690814..1693510) Mycobacterium vanbaalenii PYR-1 4648638 YP_952433.1 CDS Mvan_1598 NC_008726.1 1693713 1696265 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mmc:Mmcs_1353 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 1693713..1696265 Mycobacterium vanbaalenii PYR-1 4648639 YP_952434.1 CDS Mvan_1599 NC_008726.1 1696210 1697316 R PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1239 NLP/P60; NLP/P60 protein complement(1696210..1697316) Mycobacterium vanbaalenii PYR-1 4648640 YP_952435.1 CDS upp NC_008726.1 1697667 1698290 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1697667..1698290 Mycobacterium vanbaalenii PYR-1 4648641 YP_952436.1 CDS Mvan_1601 NC_008726.1 1698307 1699092 R KEGG: atc:AGR_pAT_295 hypothetical protein; hypothetical protein complement(1698307..1699092) Mycobacterium vanbaalenii PYR-1 4648642 YP_952437.1 CDS Mvan_1602 NC_008726.1 1699136 1699879 R PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase; creatininase complement(1699136..1699879) Mycobacterium vanbaalenii PYR-1 4646347 YP_952438.1 CDS Mvan_1603 NC_008726.1 1700151 1701557 D PFAM: glutamine synthetase, catalytic region; KEGG: mxa:MXAN_5630 glutamine synthetase family protein; glutamate--ammonia ligase 1700151..1701557 Mycobacterium vanbaalenii PYR-1 4646348 YP_952439.1 CDS Mvan_1604 NC_008726.1 1701568 1703463 D PFAM: GAF domain protein; KEGG: sco:SCO1011 hypothetical protein; putative GAF sensor protein 1701568..1703463 Mycobacterium vanbaalenii PYR-1 4646349 YP_952440.1 CDS Mvan_1605 NC_008726.1 1703636 1704250 D KEGG: mlo:mll8140 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor 1703636..1704250 Mycobacterium vanbaalenii PYR-1 4646350 YP_952441.1 CDS Mvan_1606 NC_008726.1 1704326 1705945 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpc:RPC_2481 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(1704326..1705945) Mycobacterium vanbaalenii PYR-1 4646351 YP_952442.1 CDS Mvan_1607 NC_008726.1 1706058 1707656 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mmc:Mmcs_1241 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit complement(1706058..1707656) Mycobacterium vanbaalenii PYR-1 4646352 YP_952443.1 CDS Mvan_1608 NC_008726.1 1707710 1708165 R PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1242 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1707710..1708165) Mycobacterium vanbaalenii PYR-1 4646353 YP_952444.1 CDS Mvan_1609 NC_008726.1 1708265 1709371 D PFAM: putative ammonia monooxygenase; KEGG: mmc:Mmcs_1243 putative ammonia monooxygenase; putative ammonia monooxygenase 1708265..1709371 Mycobacterium vanbaalenii PYR-1 4646354 YP_952445.1 CDS Mvan_1610 NC_008726.1 1709317 1710111 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(1709317..1710111) Mycobacterium vanbaalenii PYR-1 4646355 YP_952446.1 CDS Mvan_1611 NC_008726.1 1710159 1711340 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mmc:Mmcs_1245 peptidase M20D, amidohydrolase; amidohydrolase 1710159..1711340 Mycobacterium vanbaalenii PYR-1 4646356 YP_952447.1 CDS Mvan_1612 NC_008726.1 1711337 1712512 D KEGG: mmc:Mmcs_1246 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase 1711337..1712512 Mycobacterium vanbaalenii PYR-1 4646357 YP_952448.1 CDS Mvan_1613 NC_008726.1 1712615 1713184 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3794 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1712615..1713184) Mycobacterium vanbaalenii PYR-1 4646358 YP_952449.1 CDS Mvan_1614 NC_008726.1 1713404 1716310 D TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein; transporter 1713404..1716310 Mycobacterium vanbaalenii PYR-1 4646359 YP_952450.1 CDS Mvan_1615 NC_008726.1 1716326 1716970 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0102 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1716326..1716970) Mycobacterium vanbaalenii PYR-1 4646360 YP_952451.1 CDS Mvan_1616 NC_008726.1 1717085 1717831 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO4304 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(1717085..1717831) Mycobacterium vanbaalenii PYR-1 4646361 YP_952452.1 CDS Mvan_1617 NC_008726.1 1717957 1718565 D PFAM: regulatory protein, TetR; KEGG: sco:SCO4303 transcriptional regulator; TetR family transcriptional regulator 1717957..1718565 Mycobacterium vanbaalenii PYR-1 4646362 YP_952453.1 CDS Mvan_1618 NC_008726.1 1718569 1719042 R KEGG: mmc:Mmcs_1248 hypothetical protein; hypothetical protein complement(1718569..1719042) Mycobacterium vanbaalenii PYR-1 4646363 YP_952454.1 CDS Mvan_1619 NC_008726.1 1719055 1720542 D catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; flavoprotein disulfide reductase 1719055..1720542 Mycobacterium vanbaalenii PYR-1 4646364 YP_952455.1 CDS Mvan_1620 NC_008726.1 1720807 1722564 D PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1250 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1720807..1722564 Mycobacterium vanbaalenii PYR-1 4646365 YP_952456.1 CDS Mvan_1621 NC_008726.1 1722561 1723418 D PFAM: pseudouridine synthase; KEGG: mmc:Mmcs_1251 pseudouridine synthase; pseudouridine synthase 1722561..1723418 Mycobacterium vanbaalenii PYR-1 4646366 YP_952457.1 CDS Mvan_1622 NC_008726.1 1723981 1724367 R TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: mmc:Mmcs_0835 death-on-curing protein; death-on-curing family protein complement(1723981..1724367) Mycobacterium vanbaalenii PYR-1 4646367 YP_952458.1 CDS Mvan_1623 NC_008726.1 1724702 1725130 D KEGG: mmc:Mmcs_1252 hypothetical protein; hypothetical protein 1724702..1725130 Mycobacterium vanbaalenii PYR-1 4646368 YP_952459.1 CDS Mvan_1624 NC_008726.1 1725130 1725900 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1253 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1725130..1725900 Mycobacterium vanbaalenii PYR-1 4646369 YP_952460.1 CDS Mvan_1625 NC_008726.1 1725978 1726757 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1254 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(1725978..1726757) Mycobacterium vanbaalenii PYR-1 4646370 YP_952461.1 CDS Mvan_1626 NC_008726.1 1726768 1727436 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1257 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1726768..1727436) Mycobacterium vanbaalenii PYR-1 4646371 YP_952462.1 CDS Mvan_1627 NC_008726.1 1727506 1728546 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_1258 oxidoreductase FAD-binding region; oxidoreductase FAD-binding subunit 1727506..1728546 Mycobacterium vanbaalenii PYR-1 4648669 YP_952463.1 CDS Mvan_1628 NC_008726.1 1728644 1729777 D PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_1259 fatty acid desaturase; fatty acid desaturase 1728644..1729777 Mycobacterium vanbaalenii PYR-1 4648670 YP_952464.1 CDS Mvan_1629 NC_008726.1 1729924 1730349 D KEGG: nfa:nfa7600 hypothetical protein; hypothetical protein 1729924..1730349 Mycobacterium vanbaalenii PYR-1 4648671 YP_952465.1 CDS Mvan_1630 NC_008726.1 1730380 1731303 R KEGG: mbo:Mb3741c hypothetical protein; hypothetical protein complement(1730380..1731303) Mycobacterium vanbaalenii PYR-1 4648672 YP_952466.1 CDS Mvan_1631 NC_008726.1 1731442 1732194 R PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mpa:MAP3416 probable endonuclease VIII; DNA-formamidopyrimidine glycosylase complement(1731442..1732194) Mycobacterium vanbaalenii PYR-1 4648673 YP_952467.1 CDS Mvan_1632 NC_008726.1 1732194 1736738 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1267 DEAD/H associated; DEAD/DEAH box helicase complement(1732194..1736738) Mycobacterium vanbaalenii PYR-1 4648674 YP_952468.1 CDS Mvan_1633 NC_008726.1 1736831 1739029 D PFAM: regulatory protein, LuxR; KEGG: rha:RHA1_ro05837 probable serine/threonine-protein kinase; regulatory protein LuxR 1736831..1739029 Mycobacterium vanbaalenii PYR-1 4648675 YP_952469.1 CDS Mvan_1634 NC_008726.1 1739033 1740049 R KEGG: mmc:Mmcs_0576 hypothetical protein; hypothetical protein complement(1739033..1740049) Mycobacterium vanbaalenii PYR-1 4648676 YP_952470.1 CDS Mvan_1635 NC_008726.1 1740058 1741380 R TIGRFAM: Dyp-type peroxidase family; KEGG: mmc:Mmcs_0577 Dyp-type peroxidase; Dyp-type peroxidase family protein complement(1740058..1741380) Mycobacterium vanbaalenii PYR-1 4648677 YP_952471.1 CDS Mvan_1636 NC_008726.1 1741442 1742002 R KEGG: mmc:Mmcs_0579 hypothetical protein; hypothetical protein complement(1741442..1742002) Mycobacterium vanbaalenii PYR-1 4648678 YP_952472.1 CDS Mvan_1637 NC_008726.1 1742339 1742692 D KEGG: mmc:Mmcs_1194 hypothetical protein; hypothetical protein 1742339..1742692 Mycobacterium vanbaalenii PYR-1 4648679 YP_952473.1 CDS Mvan_1638 NC_008726.1 1742689 1743036 D KEGG: mmc:Mmcs_1195 hypothetical protein; hypothetical protein 1742689..1743036 Mycobacterium vanbaalenii PYR-1 4648680 YP_952474.1 CDS Mvan_1639 NC_008726.1 1743079 1743387 D KEGG: mmc:Mmcs_0164 hypothetical protein; hypothetical protein 1743079..1743387 Mycobacterium vanbaalenii PYR-1 4648681 YP_952475.1 CDS Mvan_1640 NC_008726.1 1743390 1744040 R PFAM: regulatory protein, TetR; KEGG: mbo:Mb3323 probable transcriptional regulatory protein (probably TetR-family); TetR family transcriptional regulator complement(1743390..1744040) Mycobacterium vanbaalenii PYR-1 4648682 YP_952476.1 CDS Mvan_1641 NC_008726.1 1744273 1744635 D TIGRFAM: alkylhydroperoxidase-like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mbo:Mb1796 hypothetical protein; alkylhydroperoxidase 1744273..1744635 Mycobacterium vanbaalenii PYR-1 4648683 YP_952477.1 CDS Mvan_1642 NC_008726.1 1744642 1745529 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1268 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1744642..1745529) Mycobacterium vanbaalenii PYR-1 4648684 YP_952478.1 CDS Mvan_1643 NC_008726.1 1745541 1747085 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1270 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1745541..1747085) Mycobacterium vanbaalenii PYR-1 4648685 YP_952479.1 CDS Mvan_1644 NC_008726.1 1747082 1748308 R PFAM: protein of unknown function DUF1338; KEGG: mbo:Mb3320 hypothetical protein; hypothetical protein complement(1747082..1748308) Mycobacterium vanbaalenii PYR-1 4648686 YP_952480.1 CDS Mvan_1645 NC_008726.1 1748332 1748802 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1271 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1748332..1748802 Mycobacterium vanbaalenii PYR-1 4648687 YP_952481.1 CDS Mvan_1646 NC_008726.1 1748852 1749511 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_0590 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(1748852..1749511) Mycobacterium vanbaalenii PYR-1 4648688 YP_952482.1 CDS Mvan_1647 NC_008726.1 1749508 1750434 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_0589 putative signal transduction histidine kinase; histidine kinase complement(1749508..1750434) Mycobacterium vanbaalenii PYR-1 4648689 YP_952483.1 CDS Mvan_1648 NC_008726.1 1750632 1753430 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: eba:ebA224 putative cation-transporting P-type ATPase; P-type HAD superfamily ATPase 1750632..1753430 Mycobacterium vanbaalenii PYR-1 4648690 YP_952484.1 CDS Mvan_1649 NC_008726.1 1753427 1754344 D PFAM: UspA domain protein; KEGG: son:SO2355 universal stress protein family; UspA domain-containing protein 1753427..1754344 Mycobacterium vanbaalenii PYR-1 4648691 YP_952485.1 CDS Mvan_1650 NC_008726.1 1754349 1754834 R KEGG: pol:Bpro_1105 histone protein; hypothetical protein complement(1754349..1754834) Mycobacterium vanbaalenii PYR-1 4648692 YP_952486.1 CDS Mvan_1651 NC_008726.1 1754932 1759335 R KEGG: rha:RHA1_ro03146 metal cation transporting ATPase, P-type ATPase superfamily; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase complement(1754932..1759335) Mycobacterium vanbaalenii PYR-1 4648693 YP_952487.1 CDS Mvan_1652 NC_008726.1 1759895 1761250 D catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase 1759895..1761250 Mycobacterium vanbaalenii PYR-1 4645819 YP_952488.1 CDS Mvan_1653 NC_008726.1 1761237 1761773 R PFAM: restriction endonuclease; KEGG: mmc:Mmcs_1273 restriction endonuclease; restriction endonuclease complement(1761237..1761773) Mycobacterium vanbaalenii PYR-1 4645820 YP_952489.1 CDS Mvan_1654 NC_008726.1 1761971 1762345 D KEGG: mmc:Mmcs_1274 hypothetical protein; hypothetical protein 1761971..1762345 Mycobacterium vanbaalenii PYR-1 4645821 YP_952490.1 CDS Mvan_1655 NC_008726.1 1762378 1762686 D KEGG: mmc:Mmcs_1275 putative protein UsfY; hypothetical protein 1762378..1762686 Mycobacterium vanbaalenii PYR-1 4645822 YP_952491.1 CDS Mvan_1656 NC_008726.1 1762872 1763756 D KEGG: mmc:Mmcs_4353 hypothetical protein; hypothetical protein 1762872..1763756 Mycobacterium vanbaalenii PYR-1 4645823 YP_952492.1 CDS Mvan_1657 NC_008726.1 1764128 1764424 R PFAM: CsbD family protein; KEGG: mmc:Mmcs_1276 CsbD-like protein; CsbD family protein complement(1764128..1764424) Mycobacterium vanbaalenii PYR-1 4645824 YP_952493.1 CDS Mvan_1658 NC_008726.1 1764454 1764741 D hypothetical protein 1764454..1764741 Mycobacterium vanbaalenii PYR-1 4645825 YP_952494.1 CDS Mvan_1659 NC_008726.1 1764734 1765225 D KEGG: mmc:Mmcs_1280 putative anti-sigma regulatory factor, serine/threonine protein kinase; putative anti-sigma regulatory factor 1764734..1765225 Mycobacterium vanbaalenii PYR-1 4645826 YP_952495.1 CDS Mvan_1660 NC_008726.1 1765222 1766010 D Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock; RNA polymerase sigma factor SigF 1765222..1766010 Mycobacterium vanbaalenii PYR-1 4645827 YP_952496.1 CDS Mvan_1661 NC_008726.1 1765981 1766424 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_1282 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(1765981..1766424) Mycobacterium vanbaalenii PYR-1 4645828 YP_952497.1 CDS Mvan_1662 NC_008726.1 1766675 1767220 D KEGG: mmc:Mmcs_1283 hypothetical protein; hypothetical protein 1766675..1767220 Mycobacterium vanbaalenii PYR-1 4645829 YP_952498.1 CDS Mvan_1663 NC_008726.1 1767252 1767569 R KEGG: mmc:Mmcs_1285 hypothetical protein; hypothetical protein complement(1767252..1767569) Mycobacterium vanbaalenii PYR-1 4645830 YP_952499.1 CDS Mvan_1664 NC_008726.1 1767777 1769579 R PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_1289 carbamoyl-phosphate synthase L chain, ATP-binding protein; carbamoyl-phosphate synthase ATP-binding subunit L complement(1767777..1769579) Mycobacterium vanbaalenii PYR-1 4645831 YP_952500.1 CDS Mvan_1665 NC_008726.1 1769749 1770867 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_5270 diguanylate cyclase; diguanylate cyclase complement(1769749..1770867) Mycobacterium vanbaalenii PYR-1 4645832 YP_952501.1 CDS Mvan_1666 NC_008726.1 1771013 1771339 R hypothetical protein complement(1771013..1771339) Mycobacterium vanbaalenii PYR-1 4645833 YP_952502.1 CDS Mvan_1667 NC_008726.1 1771471 1772679 R PFAM: EAL domain protein; KEGG: cvi:CV1332 hypothetical protein; diguanylate phosphodiesterase complement(1771471..1772679) Mycobacterium vanbaalenii PYR-1 4645834 YP_952503.1 CDS Mvan_1668 NC_008726.1 1772753 1773166 R PFAM: Fe-S metabolism associated SufE; KEGG: mmc:Mmcs_1290 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE complement(1772753..1773166) Mycobacterium vanbaalenii PYR-1 4645835 YP_952504.1 CDS Mvan_1669 NC_008726.1 1773163 1774101 R PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_1291 rhodanese-like protein; rhodanese domain-containing protein complement(1773163..1774101) Mycobacterium vanbaalenii PYR-1 4645836 YP_952505.1 CDS Mvan_1670 NC_008726.1 1774119 1775435 R PFAM: acyltransferase 3; KEGG: mmc:Mmcs_0955 acyltransferase 3; acyltransferase 3 complement(1774119..1775435) Mycobacterium vanbaalenii PYR-1 4645837 YP_952506.1 CDS Mvan_1671 NC_008726.1 1775667 1776110 D hypothetical protein 1775667..1776110 Mycobacterium vanbaalenii PYR-1 4645838 YP_952507.1 CDS Mvan_1672 NC_008726.1 1776192 1776560 D KEGG: mmc:Mmcs_1284 hypothetical protein; hypothetical protein 1776192..1776560 Mycobacterium vanbaalenii PYR-1 4645839 YP_952508.1 CDS Mvan_1673 NC_008726.1 1777055 1777465 D KEGG: mmc:Mmcs_0948 hypothetical protein; hypothetical protein 1777055..1777465 Mycobacterium vanbaalenii PYR-1 4645840 YP_952509.1 CDS Mvan_1674 NC_008726.1 1777519 1778148 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1777519..1778148) Mycobacterium vanbaalenii PYR-1 4645841 YP_952510.1 CDS Mvan_1675 NC_008726.1 1778518 1778958 D hypothetical protein 1778518..1778958 Mycobacterium vanbaalenii PYR-1 4645842 YP_952511.1 CDS Mvan_1676 NC_008726.1 1779040 1779321 R KEGG: mmc:Mmcs_1293 hypothetical protein; hypothetical protein complement(1779040..1779321) Mycobacterium vanbaalenii PYR-1 4645843 YP_952512.1 CDS Mvan_1677 NC_008726.1 1779361 1780989 R PFAM: carboxyl transferase; KEGG: mmc:Mmcs_1294 carboxyl transferase; carboxyl transferase complement(1779361..1780989) Mycobacterium vanbaalenii PYR-1 4645670 YP_952513.1 CDS Mvan_1678 NC_008726.1 1781140 1782135 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mmc:Mmcs_0928 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1781140..1782135 Mycobacterium vanbaalenii PYR-1 4645671 YP_952514.1 CDS Mvan_1679 NC_008726.1 1782383 1782805 D KEGG: mmc:Mmcs_0948 hypothetical protein; hypothetical protein 1782383..1782805 Mycobacterium vanbaalenii PYR-1 4645672 YP_952515.1 CDS Mvan_1680 NC_008726.1 1782909 1784765 D KEGG: mmc:Mmcs_0947 hypothetical protein; hypothetical protein 1782909..1784765 Mycobacterium vanbaalenii PYR-1 4645673 YP_952516.1 CDS Mvan_1681 NC_008726.1 1784830 1786347 D PFAM: lipopolysaccharide biosynthesis; KEGG: mmc:Mmcs_0946 protein-tyrosine kinase; lipopolysaccharide biosynthesis 1784830..1786347 Mycobacterium vanbaalenii PYR-1 4645674 YP_952517.1 CDS Mvan_1683 NC_008726.1 1787082 1787387 R hypothetical protein complement(1787082..1787387) Mycobacterium vanbaalenii PYR-1 4645676 YP_952518.1 CDS Mvan_1684 NC_008726.1 1787523 1788773 D PFAM: glycosyl transferase, group 1; KEGG: neu:NE1798 glycosyl transferase group 1; group 1 glycosyl transferase 1787523..1788773 Mycobacterium vanbaalenii PYR-1 4645677 YP_952519.1 CDS Mvan_1685 NC_008726.1 1788770 1790944 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mag:amb0040 threonine dehydrogenase; alcohol dehydrogenase 1788770..1790944 Mycobacterium vanbaalenii PYR-1 4645678 YP_952520.1 CDS Mvan_1686 NC_008726.1 1790946 1792730 D PFAM: Heparinase II/III family protein; KEGG: gme:Gmet_1501 heparinase II/III-like; heparinase II/III family protein 1790946..1792730 Mycobacterium vanbaalenii PYR-1 4645679 YP_952521.1 CDS Mvan_1687 NC_008726.1 1792943 1793542 D KEGG: mbo:Mb2834 hypothetical protein; hypothetical protein 1792943..1793542 Mycobacterium vanbaalenii PYR-1 4645680 YP_952522.1 CDS Mvan_1688 NC_008726.1 1793654 1795153 D PFAM: Integrase, catalytic region; KEGG: mtc:MT2879 IS1604, transposase; integrase catalytic subunit 1793654..1795153 Mycobacterium vanbaalenii PYR-1 4645681 YP_952523.1 CDS Mvan_1689 NC_008726.1 1795150 1795965 D SMART: AAA ATPase; KEGG: mtc:MT2880 general secretion pathway protein A-related protein; ATPase AAA 1795150..1795965 Mycobacterium vanbaalenii PYR-1 4645682 YP_952524.1 CDS Mvan_1690 NC_008726.1 1796380 1796592 R hypothetical protein complement(1796380..1796592) Mycobacterium vanbaalenii PYR-1 4645683 YP_952525.1 CDS Mvan_1691 NC_008726.1 1796786 1797103 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 1796786..1797103 Mycobacterium vanbaalenii PYR-1 4645684 YP_952526.1 CDS Mvan_1692 NC_008726.1 1797100 1797993 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 1797100..1797993 Mycobacterium vanbaalenii PYR-1 4645685 YP_952527.1 CDS Mvan_1693 NC_008726.1 1798152 1799777 R hypothetical protein complement(1798152..1799777) Mycobacterium vanbaalenii PYR-1 4645686 YP_952528.1 CDS Mvan_1696 NC_008726.1 1800713 1801855 D PFAM: glycosyl transferase, group 1; KEGG: rme:Rmet_5853 glycosyl transferase, group 1; group 1 glycosyl transferase 1800713..1801855 Mycobacterium vanbaalenii PYR-1 4645689 YP_952529.1 CDS Mvan_1697 NC_008726.1 1801902 1803173 D hypothetical protein 1801902..1803173 Mycobacterium vanbaalenii PYR-1 4645690 YP_952530.1 CDS Mvan_1698 NC_008726.1 1803189 1804430 R KEGG: sme:SMb21244 putative membrane protein, similar to putative polysaccharide transporter; hypothetical protein complement(1803189..1804430) Mycobacterium vanbaalenii PYR-1 4645691 YP_952531.1 CDS Mvan_1699 NC_008726.1 1804473 1805732 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bja:blr6296 probable GDP-mannose 6-dehydrogenase; GDP-mannose 6-dehydrogenase complement(1804473..1805732) Mycobacterium vanbaalenii PYR-1 4645692 YP_952532.1 CDS Mvan_1700 NC_008726.1 1806216 1807040 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase complement(1806216..1807040) Mycobacterium vanbaalenii PYR-1 4645693 YP_952533.1 CDS Mvan_1702 NC_008726.1 1808452 1808916 D SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_0932 protein tyrosine phosphatase; protein tyrosine phosphatase 1808452..1808916 Mycobacterium vanbaalenii PYR-1 4648086 YP_952534.1 CDS Mvan_1703 NC_008726.1 1809111 1810601 D PFAM: sugar transferase; KEGG: mmc:Mmcs_1295 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate galactose phosphotransferase 1809111..1810601 Mycobacterium vanbaalenii PYR-1 4648087 YP_952535.1 CDS Mvan_1705 NC_008726.1 1811155 1811802 D PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: mmc:Mmcs_3583 di-trans-poly-cis-decaprenylcistransferase; di-trans-poly-cis-decaprenylcistransferase 1811155..1811802 Mycobacterium vanbaalenii PYR-1 4648089 YP_952536.1 CDS Mvan_1706 NC_008726.1 1811810 1813207 D PFAM: amine oxidase; KEGG: mmc:Mmcs_3582 amine oxidase; hypothetical protein 1811810..1813207 Mycobacterium vanbaalenii PYR-1 4648090 YP_952537.1 CDS Mvan_1707 NC_008726.1 1813274 1813792 D PFAM: membrane-flanked domain; KEGG: mmc:Mmcs_1296 membrane-flanked domain protein; hypothetical protein 1813274..1813792 Mycobacterium vanbaalenii PYR-1 4648091 YP_952538.1 CDS Mvan_1708 NC_008726.1 1813834 1814406 D PFAM: protein of unknown function DUF218; KEGG: nfa:nfa54230 hypothetical protein; hypothetical protein 1813834..1814406 Mycobacterium vanbaalenii PYR-1 4648092 YP_952539.1 CDS Mvan_1709 NC_008726.1 1814427 1814672 D KEGG: plt:Plut_1877 hypothetical protein; hypothetical protein 1814427..1814672 Mycobacterium vanbaalenii PYR-1 4648093 YP_952540.1 CDS Mvan_1710 NC_008726.1 1814672 1815094 D PFAM: PilT protein domain protein; KEGG: plt:Plut_1876 plasmid stabilization protein StbB-like; PilT domain-containing protein 1814672..1815094 Mycobacterium vanbaalenii PYR-1 4648094 YP_952541.1 CDS Mvan_1711 NC_008726.1 1815467 1815835 R KEGG: mka:MK1211 integral membrane protein possibly involved in chromosome condensation; hypothetical protein complement(1815467..1815835) Mycobacterium vanbaalenii PYR-1 4648095 YP_952542.1 CDS Mvan_1712 NC_008726.1 1815878 1816600 R PFAM: GtrA family protein; KEGG: mmc:Mmcs_1297 GtrA-like protein; GtrA family protein complement(1815878..1816600) Mycobacterium vanbaalenii PYR-1 4648096 YP_952543.1 CDS Mvan_1713 NC_008726.1 1816635 1817840 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1816635..1817840 Mycobacterium vanbaalenii PYR-1 4648097 YP_952544.1 CDS Mvan_1714 NC_008726.1 1817837 1818337 D KEGG: mmc:Mmcs_1299 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1817837..1818337 Mycobacterium vanbaalenii PYR-1 4648098 YP_952545.1 CDS Mvan_1716 NC_008726.1 1819582 1819869 D TIGRFAM: prevent-host-death family protein; KEGG: mbo:Mb3441 hypothetical protein; prevent-host-death family protein 1819582..1819869 Mycobacterium vanbaalenii PYR-1 4648100 YP_952546.1 CDS Mvan_1717 NC_008726.1 1819866 1820270 D PFAM: PilT protein domain protein; KEGG: mbo:Mb3442 hypothetical protein; PilT domain-containing protein 1819866..1820270 Mycobacterium vanbaalenii PYR-1 4648101 YP_952547.1 CDS Mvan_1718 NC_008726.1 1820329 1822662 R KEGG: mag:amb2001 type V secretory pathway, adhesin AidA; TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: SH3, type-5 domain protein; SMART: SH3 domain protein domain protein; putative outer membrane adhesin-like protein complement(1820329..1822662) Mycobacterium vanbaalenii PYR-1 4648102 YP_952548.1 CDS Mvan_1719 NC_008726.1 1823328 1824497 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mpa:MAP3392c acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1823328..1824497 Mycobacterium vanbaalenii PYR-1 4648103 YP_952549.1 CDS Mvan_1720 NC_008726.1 1824570 1830419 R TIGRFAM: putative outer membrane adhesin like proteiin; 40-residue YVTN family beta-propeller repeat protein; KEGG: tcx:Tcr_0105 VCBS; YVTN beta-propeller repeat-containing protein complement(1824570..1830419) Mycobacterium vanbaalenii PYR-1 4648104 YP_952550.1 CDS Mvan_1721 NC_008726.1 1830555 1830878 D KEGG: mtc:MT2625 hypothetical protein; hypothetical protein 1830555..1830878 Mycobacterium vanbaalenii PYR-1 4648105 YP_952551.1 CDS Mvan_1722 NC_008726.1 1830956 1831729 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mmc:Mmcs_1304 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase complement(1830956..1831729) Mycobacterium vanbaalenii PYR-1 4648106 YP_952552.1 CDS Mvan_1723 NC_008726.1 1831765 1832139 R KEGG: mmc:Mmcs_1316 hypothetical protein; hypothetical protein complement(1831765..1832139) Mycobacterium vanbaalenii PYR-1 4648107 YP_952553.1 CDS Mvan_1724 NC_008726.1 1832411 1832740 R KEGG: mmc:Mmcs_1316 hypothetical protein; hypothetical protein complement(1832411..1832740) Mycobacterium vanbaalenii PYR-1 4648108 YP_952554.1 CDS Mvan_1725 NC_008726.1 1832872 1833582 R KEGG: mmc:Mmcs_1317 hypothetical protein; hypothetical protein complement(1832872..1833582) Mycobacterium vanbaalenii PYR-1 4648109 YP_952555.1 CDS Mvan_1726 NC_008726.1 1833584 1835065 R TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mmc:Mmcs_1318 cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator complement(1833584..1835065) Mycobacterium vanbaalenii PYR-1 4648110 YP_952556.1 CDS Mvan_1727 NC_008726.1 1835132 1835986 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_1319 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1835132..1835986 Mycobacterium vanbaalenii PYR-1 4647249 YP_952557.1 CDS Mvan_1728 NC_008726.1 1836021 1836896 D PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_1320 glycosyl transferase, family 2; glycosyl transferase family protein 1836021..1836896 Mycobacterium vanbaalenii PYR-1 4647250 YP_952558.1 CDS Mvan_1729 NC_008726.1 1836924 1838003 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mmc:Mmcs_1321 nucleotidyl transferase; nucleotidyl transferase 1836924..1838003 Mycobacterium vanbaalenii PYR-1 4647251 YP_952559.1 CDS Mvan_1730 NC_008726.1 1838143 1839009 D KEGG: mmc:Mmcs_4275 hypothetical protein; hypothetical protein 1838143..1839009 Mycobacterium vanbaalenii PYR-1 4647252 YP_952560.1 CDS Mvan_1731 NC_008726.1 1839010 1839582 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_1322 NUDIX hydrolase; NUDIX hydrolase complement(1839010..1839582) Mycobacterium vanbaalenii PYR-1 4647253 YP_952561.1 CDS Mvan_1732 NC_008726.1 1839662 1841002 R catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0); F420-0--gamma-glutamyl ligase complement(1839662..1841002) Mycobacterium vanbaalenii PYR-1 4647254 YP_952562.1 CDS Mvan_1733 NC_008726.1 1840999 1842078 R catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase complement(1840999..1842078) Mycobacterium vanbaalenii PYR-1 4647255 YP_952563.1 CDS Mvan_1734 NC_008726.1 1842277 1842678 D PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_1325 transcription factor WhiB; transcription factor WhiB 1842277..1842678 Mycobacterium vanbaalenii PYR-1 4647256 YP_952564.1 CDS Mvan_1735 NC_008726.1 1842711 1843133 R KEGG: mmc:Mmcs_1326 hypothetical protein; hypothetical protein complement(1842711..1843133) Mycobacterium vanbaalenii PYR-1 4647257 YP_952565.1 CDS Mvan_1736 NC_008726.1 1843265 1843681 D KEGG: mmc:Mmcs_1327 hypothetical protein; hypothetical protein 1843265..1843681 Mycobacterium vanbaalenii PYR-1 4647258 YP_952566.1 CDS manB NC_008726.1 1843828 1845222 D converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; phosphomannomutase 1843828..1845222 Mycobacterium vanbaalenii PYR-1 4647259 YP_952567.1 CDS Mvan_1738 NC_008726.1 1845219 1846334 D KEGG: mmc:Mmcs_1329 hypothetical protein; hypothetical protein 1845219..1846334 Mycobacterium vanbaalenii PYR-1 4647260 YP_952568.1 CDS Mvan_1739 NC_008726.1 1846340 1847566 D TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: mmc:Mmcs_1330 mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase 1846340..1847566 Mycobacterium vanbaalenii PYR-1 4647261 YP_952569.1 CDS Mvan_1740 NC_008726.1 1847799 1849280 D PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_1332 amino acid permease-associated region; amino acid permease-associated protein 1847799..1849280 Mycobacterium vanbaalenii PYR-1 4647262 YP_952570.1 CDS Mvan_1741 NC_008726.1 1849514 1849819 D PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_4824 transcription factor WhiB; transcription factor WhiB 1849514..1849819 Mycobacterium vanbaalenii PYR-1 4647263 YP_952571.1 CDS Mvan_1742 NC_008726.1 1850179 1851450 D PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_1333 alkane-1 monooxygenase; alkane 1-monooxygenase 1850179..1851450 Mycobacterium vanbaalenii PYR-1 4647264 YP_952572.1 CDS Mvan_1743 NC_008726.1 1851447 1851620 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: nfa:nfa46170 putative rubredoxin; rubredoxin-type Fe(Cys)4 protein 1851447..1851620 Mycobacterium vanbaalenii PYR-1 4647265 YP_952573.1 CDS Mvan_1744 NC_008726.1 1851617 1851799 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mbo:Mb3278c probable rubredoxin RubB; rubredoxin-type Fe(Cys)4 protein 1851617..1851799 Mycobacterium vanbaalenii PYR-1 4647266 YP_952574.1 CDS Mvan_1745 NC_008726.1 1851831 1852562 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1335 transcriptional regulator, TetR family; TetR family transcriptional regulator 1851831..1852562 Mycobacterium vanbaalenii PYR-1 4647267 YP_952575.1 CDS Mvan_1746 NC_008726.1 1852751 1854208 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1852751..1854208 Mycobacterium vanbaalenii PYR-1 4647268 YP_952576.1 CDS Mvan_1747 NC_008726.1 1854210 1854698 D hypothetical protein 1854210..1854698 Mycobacterium vanbaalenii PYR-1 4647269 YP_952577.1 CDS Mvan_1748 NC_008726.1 1854695 1855165 D hypothetical protein 1854695..1855165 Mycobacterium vanbaalenii PYR-1 4647270 YP_952578.1 CDS Mvan_1749 NC_008726.1 1855191 1857050 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mbo:Mb3124c PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase) (triglyceride lipase) (tributyrase); alpha/beta hydrolase domain-containing protein complement(1855191..1857050) Mycobacterium vanbaalenii PYR-1 4647271 YP_952579.1 CDS Mvan_1750 NC_008726.1 1857705 1858340 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1857705..1858340 Mycobacterium vanbaalenii PYR-1 4647272 YP_952580.1 CDS Mvan_1751 NC_008726.1 1858432 1859085 D KEGG: gme:Gmet_1207 hypothetical protein; hypothetical protein 1858432..1859085 Mycobacterium vanbaalenii PYR-1 4647273 YP_952581.1 CDS Mvan_1752 NC_008726.1 1859149 1859835 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_1347 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1859149..1859835 Mycobacterium vanbaalenii PYR-1 4647048 YP_952582.1 CDS Mvan_1753 NC_008726.1 1859952 1861595 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_1348 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1859952..1861595 Mycobacterium vanbaalenii PYR-1 4647049 YP_952583.1 CDS Mvan_1754 NC_008726.1 1861592 1863349 D KEGG: mmc:Mmcs_1349 LpqB; lipoprotein LpqB 1861592..1863349 Mycobacterium vanbaalenii PYR-1 4647050 YP_952584.1 CDS Mvan_1755 NC_008726.1 1863383 1863769 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3574 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1863383..1863769 Mycobacterium vanbaalenii PYR-1 4647051 YP_952585.1 CDS Mvan_1756 NC_008726.1 1864051 1865160 D KEGG: mmc:Mmcs_2469 hypothetical protein; hypothetical protein 1864051..1865160 Mycobacterium vanbaalenii PYR-1 4647052 YP_952586.1 CDS Mvan_1757 NC_008726.1 1865157 1865708 D KEGG: mmc:Mmcs_4671 PPE family protein; PPE family protein 1865157..1865708 Mycobacterium vanbaalenii PYR-1 4647053 YP_952587.1 CDS Mvan_1758 NC_008726.1 1865724 1867361 R PFAM: transposase, IS4 family protein; KEGG: cdi:DIP0047 putative transposase (pseudogene); transposase, IS4 family protein complement(1865724..1867361) Mycobacterium vanbaalenii PYR-1 4647054 YP_952588.1 CDS Mvan_1760 NC_008726.1 1869635 1870276 D KEGG: mpa:MAP3356c hypothetical protein; hypothetical protein 1869635..1870276 Mycobacterium vanbaalenii PYR-1 4647056 YP_952589.1 CDS Mvan_1761 NC_008726.1 1870502 1871254 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mmc:Mmcs_1352 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 1870502..1871254 Mycobacterium vanbaalenii PYR-1 4647057 YP_952590.1 CDS Mvan_1762 NC_008726.1 1871415 1874231 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1871415..1874231 Mycobacterium vanbaalenii PYR-1 4647058 YP_952591.1 CDS Mvan_1763 NC_008726.1 1874288 1874800 R KEGG: mmc:Mmcs_1354 conserved hypothetical alanine arginine proline rich protein; hypothetical protein complement(1874288..1874800) Mycobacterium vanbaalenii PYR-1 4647059 YP_952592.1 CDS Mvan_1764 NC_008726.1 1874971 1876380 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_1355 protein of unknown function UPF0089; hypothetical protein 1874971..1876380 Mycobacterium vanbaalenii PYR-1 4647060 YP_952593.1 CDS Mvan_1765 NC_008726.1 1876439 1878160 D TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mmc:Mmcs_1356 choline/carnitine/betaine transport; choline/carnitine/betaine transporter 1876439..1878160 Mycobacterium vanbaalenii PYR-1 4647061 YP_952594.1 CDS Mvan_1766 NC_008726.1 1878295 1878801 D KEGG: mbo:Mb3260c hypothetical protein; hypothetical protein 1878295..1878801 Mycobacterium vanbaalenii PYR-1 4647062 YP_952595.1 CDS Mvan_1767 NC_008726.1 1878892 1880031 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpa:MAP3344c hypothetical protein; ferredoxin 1878892..1880031 Mycobacterium vanbaalenii PYR-1 4647063 YP_952596.1 CDS Mvan_1768 NC_008726.1 1880101 1881348 D PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_1359 fatty acid desaturase; fatty acid desaturase 1880101..1881348 Mycobacterium vanbaalenii PYR-1 4647064 YP_952597.1 CDS Mvan_1769 NC_008726.1 1881416 1882261 R PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_1360 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase complement(1881416..1882261) Mycobacterium vanbaalenii PYR-1 4647065 YP_952598.1 CDS Mvan_1770 NC_008726.1 1882349 1883329 R PFAM: GTPase EngC; KEGG: mpa:MAP3335 hypothetical protein; GTPase EngC complement(1882349..1883329) Mycobacterium vanbaalenii PYR-1 4647066 YP_952599.1 CDS Mvan_1771 NC_008726.1 1883326 1884666 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1883326..1884666) Mycobacterium vanbaalenii PYR-1 4647067 YP_952600.1 CDS Mvan_1772 NC_008726.1 1884751 1885509 D PFAM: protein of unknown function DUF159; KEGG: mmc:Mmcs_1363 protein of unknown function DUF159; hypothetical protein 1884751..1885509 Mycobacterium vanbaalenii PYR-1 4647068 YP_952601.1 CDS Mvan_1773 NC_008726.1 1885506 1887023 D PFAM: methyltransferase small; KEGG: mmc:Mmcs_1364 methyltransferase small; methyltransferase small 1885506..1887023 Mycobacterium vanbaalenii PYR-1 4647069 YP_952602.1 CDS Mvan_1774 NC_008726.1 1887028 1887813 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aba:Acid345_1190 UbiE/COQ5 methyltransferase; type 11 methyltransferase complement(1887028..1887813) Mycobacterium vanbaalenii PYR-1 4647070 YP_952603.1 CDS Mvan_1775 NC_008726.1 1887833 1888573 D KEGG: mbo:Mb1962 hypothetical protein; hypothetical protein 1887833..1888573 Mycobacterium vanbaalenii PYR-1 4647071 YP_952604.1 CDS Mvan_1776 NC_008726.1 1888663 1889508 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1365 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1888663..1889508) Mycobacterium vanbaalenii PYR-1 4647072 YP_952605.1 CDS Mvan_1777 NC_008726.1 1889519 1890055 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mmc:Mmcs_1378 hypothetical protein; ybaK/ebsC protein complement(1889519..1890055) Mycobacterium vanbaalenii PYR-1 4647413 YP_952606.1 CDS Mvan_1778 NC_008726.1 1890157 1890903 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1379 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1890157..1890903 Mycobacterium vanbaalenii PYR-1 4647414 YP_952607.1 CDS Mvan_1779 NC_008726.1 1890900 1891232 D KEGG: mmc:Mmcs_1380 hypothetical protein; hypothetical protein 1890900..1891232 Mycobacterium vanbaalenii PYR-1 4647415 YP_952608.1 CDS Mvan_1780 NC_008726.1 1891584 1891799 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mpa:MAP3322c hypothetical protein; putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1891584..1891799 Mycobacterium vanbaalenii PYR-1 4647416 YP_952609.1 CDS Mvan_1781 NC_008726.1 1891870 1893360 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: mmc:Mmcs_1382 signal transduction histidine kinase; signal transduction histidine kinase 1891870..1893360 Mycobacterium vanbaalenii PYR-1 4647417 YP_952610.1 CDS Mvan_1782 NC_008726.1 1893466 1893720 R PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_1383 transcription factor WhiB; transcription factor WhiB complement(1893466..1893720) Mycobacterium vanbaalenii PYR-1 4647418 YP_952611.1 CDS Mvan_1783 NC_008726.1 1893987 1894943 R PFAM: diacylglycerol kinase, catalytic region; KEGG: mmc:Mmcs_1384 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit complement(1893987..1894943) Mycobacterium vanbaalenii PYR-1 4647419 YP_952612.1 CDS Mvan_1784 NC_008726.1 1894993 1895436 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1894993..1895436 Mycobacterium vanbaalenii PYR-1 4647420 YP_952613.1 CDS Mvan_1785 NC_008726.1 1895448 1895849 D KEGG: mmc:Mmcs_1385 putative conserved integral membrane protein; putative integral membrane protein 1895448..1895849 Mycobacterium vanbaalenii PYR-1 4647421 YP_952614.1 CDS Mvan_1786 NC_008726.1 1895795 1896283 R PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: mmc:Mmcs_1386 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1895795..1896283) Mycobacterium vanbaalenii PYR-1 4647422 YP_952615.1 CDS Mvan_1787 NC_008726.1 1896280 1897377 R TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: mmc:Mmcs_1387 isochorismate synthases; isochorismate synthase complement(1896280..1897377) Mycobacterium vanbaalenii PYR-1 4647423 YP_952616.1 CDS Mvan_1788 NC_008726.1 1897374 1897985 R forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily; acid phosphatase complement(1897374..1897985) Mycobacterium vanbaalenii PYR-1 4647424 YP_952617.1 CDS Mvan_1789 NC_008726.1 1898073 1898867 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mpa:MAP3314c chromosome partitioning protein; cobyrinic acid a,c-diamide synthase 1898073..1898867 Mycobacterium vanbaalenii PYR-1 4647425 YP_952618.1 CDS Mvan_1790 NC_008726.1 1898864 1900075 R KEGG: mmc:Mmcs_1392 hypothetical protein; hypothetical protein complement(1898864..1900075) Mycobacterium vanbaalenii PYR-1 4647426 YP_952619.1 CDS Mvan_1791 NC_008726.1 1900095 1901579 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase complement(1900095..1901579) Mycobacterium vanbaalenii PYR-1 4647427 YP_952620.1 CDS Mvan_1792 NC_008726.1 1901830 1902543 D KEGG: mmc:Mmcs_1394 hypothetical protein; hypothetical protein 1901830..1902543 Mycobacterium vanbaalenii PYR-1 4647428 YP_952621.1 CDS Mvan_1793 NC_008726.1 1902619 1903401 R KEGG: mmc:Mmcs_1395 hypothetical protein; hypothetical protein complement(1902619..1903401) Mycobacterium vanbaalenii PYR-1 4647429 YP_952622.1 CDS Mvan_1794 NC_008726.1 1903673 1903924 D KEGG: mtc:MT3304 hypothetical protein; hypothetical protein 1903673..1903924 Mycobacterium vanbaalenii PYR-1 4647430 YP_952623.1 CDS Mvan_1795 NC_008726.1 1903992 1904666 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1397 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1903992..1904666) Mycobacterium vanbaalenii PYR-1 4647431 YP_952624.1 CDS Mvan_1796 NC_008726.1 1904874 1905902 D KEGG: mmc:Mmcs_1398 hypothetical protein; hypothetical protein 1904874..1905902 Mycobacterium vanbaalenii PYR-1 4647432 YP_952625.1 CDS Mvan_1797 NC_008726.1 1906018 1907211 D The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; molybdopterin biosynthesis-like protein MoeZ 1906018..1907211 Mycobacterium vanbaalenii PYR-1 4647433 YP_952626.1 CDS Mvan_1798 NC_008726.1 1907242 1908102 D KEGG: mmc:Mmcs_1400 hypothetical protein; hypothetical protein 1907242..1908102 Mycobacterium vanbaalenii PYR-1 4647434 YP_952627.1 CDS Mvan_1799 NC_008726.1 1908184 1908480 R PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: mmc:Mmcs_1401 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(1908184..1908480) Mycobacterium vanbaalenii PYR-1 4647435 YP_952628.1 CDS Mvan_1800 NC_008726.1 1908483 1909265 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1402 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1908483..1909265) Mycobacterium vanbaalenii PYR-1 4647436 YP_952629.1 CDS Mvan_1801 NC_008726.1 1909344 1912460 D PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_1403 UvrD/REP helicase; UvrD/REP helicase 1909344..1912460 Mycobacterium vanbaalenii PYR-1 4647437 YP_952630.1 CDS Mvan_1802 NC_008726.1 1912457 1915717 D PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_1404 UvrD/REP helicase; UvrD/REP helicase 1912457..1915717 Mycobacterium vanbaalenii PYR-1 4644058 YP_952631.1 CDS Mvan_1803 NC_008726.1 1915721 1916125 R KEGG: mmc:Mmcs_1405 hypothetical protein; hypothetical protein complement(1915721..1916125) Mycobacterium vanbaalenii PYR-1 4644059 YP_952632.1 CDS Mvan_1804 NC_008726.1 1916172 1917251 D PFAM: TrkA-N domain protein; Ion transport 2 domain protein,; KEGG: mmc:Mmcs_1406 TrkA-N; TrkA domain-containing protein 1916172..1917251 Mycobacterium vanbaalenii PYR-1 4644060 YP_952633.1 CDS nudC NC_008726.1 1917248 1918174 D can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 1917248..1918174 Mycobacterium vanbaalenii PYR-1 4644061 YP_952634.1 CDS Mvan_1806 NC_008726.1 1918246 1918497 R TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mmc:Mmcs_1408 glutaredoxin-like protein GlrX; glutaredoxin-like protein complement(1918246..1918497) Mycobacterium vanbaalenii PYR-1 4644062 YP_952635.1 CDS Mvan_1807 NC_008726.1 1918569 1920701 D PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: mmc:Mmcs_1409 UvrD/REP helicase; UvrD/REP helicase 1918569..1920701 Mycobacterium vanbaalenii PYR-1 4644063 YP_952636.1 CDS Mvan_1808 NC_008726.1 1920757 1921089 R hypothetical protein complement(1920757..1921089) Mycobacterium vanbaalenii PYR-1 4644064 YP_952637.1 CDS Mvan_1809 NC_008726.1 1921131 1921406 D PFAM: HMG-I and HMG-Y, DNA-binding domain protein; transcription factor WhiB; KEGG: mmc:Mmcs_1410 transcription factor WhiB; transcription factor WhiB 1921131..1921406 Mycobacterium vanbaalenii PYR-1 4644065 YP_952638.1 CDS Mvan_1810 NC_008726.1 1921426 1922763 R PFAM: ABC-1 domain protein; KEGG: mmc:Mmcs_1411 ABC-1; hypothetical protein complement(1921426..1922763) Mycobacterium vanbaalenii PYR-1 4644066 YP_952639.1 CDS Mvan_1811 NC_008726.1 1922806 1923627 R KEGG: mmc:Mmcs_1412 hypothetical protein; hypothetical protein complement(1922806..1923627) Mycobacterium vanbaalenii PYR-1 4644067 YP_952640.1 CDS Mvan_1812 NC_008726.1 1923803 1925200 R KEGG: mmc:Mmcs_1413 hypothetical protein; hypothetical protein complement(1923803..1925200) Mycobacterium vanbaalenii PYR-1 4644068 YP_952641.1 CDS Mvan_1813 NC_008726.1 1925236 1926315 D KEGG: mmc:Mmcs_1414 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 1925236..1926315 Mycobacterium vanbaalenii PYR-1 4644069 YP_952642.1 CDS Mvan_1814 NC_008726.1 1926410 1929418 D PFAM: protein of unknown function UPF0182; KEGG: mmc:Mmcs_1415 protein of unknown function UPF0182; hypothetical protein 1926410..1929418 Mycobacterium vanbaalenii PYR-1 4644070 YP_952643.1 CDS Mvan_1815 NC_008726.1 1929443 1932868 D PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: mmc:Mmcs_1416 transcriptional regulator, SARP family; transcriptional regulator 1929443..1932868 Mycobacterium vanbaalenii PYR-1 4644071 YP_952644.1 CDS Mvan_1816 NC_008726.1 1933086 1934468 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_1417 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 1933086..1934468 Mycobacterium vanbaalenii PYR-1 4644072 YP_952645.1 CDS Mvan_1817 NC_008726.1 1934745 1936700 D molecular chaperone; heat shock protein 90 1934745..1936700 Mycobacterium vanbaalenii PYR-1 4644073 YP_952646.1 CDS Mvan_1818 NC_008726.1 1937428 1939794 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; KEGG: cel:T21C9.6 Hypothetical protein T21C9.6; pyruvate, water dikinase complement(1937428..1939794) Mycobacterium vanbaalenii PYR-1 4644075 YP_952647.1 CDS Mvan_1819 NC_008726.1 1939799 1940788 R KEGG: mmc:Mmcs_1557 hypothetical protein; hypothetical protein complement(1939799..1940788) Mycobacterium vanbaalenii PYR-1 4644076 YP_952648.1 CDS Mvan_1820 NC_008726.1 1940797 1941912 R KEGG: mpa:MAP3225 hypothetical protein; hypothetical protein complement(1940797..1941912) Mycobacterium vanbaalenii PYR-1 4644077 YP_952649.1 CDS Mvan_1821 NC_008726.1 1941963 1942562 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP3223c hypothetical protein; TetR family transcriptional regulator 1941963..1942562 Mycobacterium vanbaalenii PYR-1 4644078 YP_952650.1 CDS Mvan_1822 NC_008726.1 1942784 1944403 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mbo:Mb3124c PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase) (triglyceride lipase) (tributyrase); alpha/beta hydrolase domain-containing protein 1942784..1944403 Mycobacterium vanbaalenii PYR-1 4644079 YP_952651.1 CDS Mvan_1823 NC_008726.1 1944520 1945914 R PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0347 aminotransferase class-III; hypothetical protein complement(1944520..1945914) Mycobacterium vanbaalenii PYR-1 4644080 YP_952652.1 CDS Mvan_1824 NC_008726.1 1946042 1947547 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0348 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1946042..1947547) Mycobacterium vanbaalenii PYR-1 4644081 YP_952653.1 CDS Mvan_1825 NC_008726.1 1947724 1949295 D PFAM: purine catabolism PurC domain protein; KEGG: mmc:Mmcs_0349 purine catabolism PurC-like protein; purine catabolism PurC domain-containing protein 1947724..1949295 Mycobacterium vanbaalenii PYR-1 4644082 YP_952654.1 CDS Mvan_1826 NC_008726.1 1949301 1949714 R PFAM: protein of unknown function DUF302; KEGG: mpa:MAP3536 hypothetical protein; hypothetical protein complement(1949301..1949714) Mycobacterium vanbaalenii PYR-1 4644206 YP_952655.1 CDS Mvan_1827 NC_008726.1 1949741 1950010 R PFAM: protein of unknown function DUF156; KEGG: mmc:Mmcs_5315 protein of unknown function DUF156; hypothetical protein complement(1949741..1950010) Mycobacterium vanbaalenii PYR-1 4644207 YP_952656.1 CDS Mvan_1828 NC_008726.1 1950073 1950948 R PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_5314 protein of unknown function DUF81; hypothetical protein complement(1950073..1950948) Mycobacterium vanbaalenii PYR-1 4644208 YP_952657.1 CDS Mvan_1829 NC_008726.1 1950954 1951631 R PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_5313 rhodanese-like protein; rhodanese domain-containing protein complement(1950954..1951631) Mycobacterium vanbaalenii PYR-1 4644209 YP_952658.1 CDS Mvan_1830 NC_008726.1 1951828 1953207 D PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: mmc:Mmcs_5312 beta-lactamase-like protein; beta-lactamase domain-containing protein 1951828..1953207 Mycobacterium vanbaalenii PYR-1 4644210 YP_952659.1 CDS Mvan_1831 NC_008726.1 1953238 1954440 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1953238..1954440 Mycobacterium vanbaalenii PYR-1 4644211 YP_952660.1 CDS Mvan_1832 NC_008726.1 1954475 1954852 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_5310 thioredoxin; thioredoxin 1954475..1954852 Mycobacterium vanbaalenii PYR-1 4644212 YP_952661.1 CDS Mvan_1833 NC_008726.1 1954898 1956085 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_1438 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1954898..1956085) Mycobacterium vanbaalenii PYR-1 4644213 YP_952662.1 CDS Mvan_1834 NC_008726.1 1956072 1956827 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_1439 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1956072..1956827) Mycobacterium vanbaalenii PYR-1 4644214 YP_952663.1 CDS Mvan_1836 NC_008726.1 1957383 1958012 D KEGG: mmc:Mmcs_4296 hypothetical protein; hypothetical protein 1957383..1958012 Mycobacterium vanbaalenii PYR-1 4644216 YP_952664.1 CDS Mvan_1837 NC_008726.1 1958053 1958844 R KEGG: mmc:Mmcs_2997 hypothetical protein; hypothetical protein complement(1958053..1958844) Mycobacterium vanbaalenii PYR-1 4644217 YP_952665.1 CDS Mvan_1838 NC_008726.1 1959572 1960879 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein 1959572..1960879 Mycobacterium vanbaalenii PYR-1 4644218 YP_952666.1 CDS Mvan_1839 NC_008726.1 1960912 1961697 R SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:nfa15840 putative transcriptional regulator; helix-turn-helix domain-containing protein complement(1960912..1961697) Mycobacterium vanbaalenii PYR-1 4644219 YP_952667.1 CDS Mvan_1840 NC_008726.1 1961732 1962103 D hypothetical protein 1961732..1962103 Mycobacterium vanbaalenii PYR-1 4644220 YP_952668.1 CDS Mvan_1841 NC_008726.1 1962093 1963118 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP1621 hypothetical protein; alcohol dehydrogenase complement(1962093..1963118) Mycobacterium vanbaalenii PYR-1 4644221 YP_952669.1 CDS Mvan_1842 NC_008726.1 1963120 1965057 R KEGG: mpa:MAP1620 hypothetical protein; hypothetical protein complement(1963120..1965057) Mycobacterium vanbaalenii PYR-1 4644222 YP_952670.1 CDS Mvan_1843 NC_008726.1 1965125 1966114 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: mac:MA4367 5-amino-6-(5-phosphoribosylamino) uracil reductase; deaminase-reductase domain-containing protein 1965125..1966114 Mycobacterium vanbaalenii PYR-1 4644223 YP_952671.1 CDS Mvan_1844 NC_008726.1 1966170 1967531 R PFAM: aldehyde dehydrogenase; KEGG: dra:DRA0343 succinic-semialdehyde dehydrogenase, putative; aldehyde dehydrogenase complement(1966170..1967531) Mycobacterium vanbaalenii PYR-1 4644224 YP_952672.1 CDS Mvan_1845 NC_008726.1 1967542 1969059 R PFAM: amino acid permease-associated region; KEGG: sma:SAV1620 amino acid permease; amino acid permease-associated protein complement(1967542..1969059) Mycobacterium vanbaalenii PYR-1 4644225 YP_952673.1 CDS Mvan_1846 NC_008726.1 1969214 1969969 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV1739 GntR-family transcriptional regulator; regulatory protein GntR 1969214..1969969 Mycobacterium vanbaalenii PYR-1 4644226 YP_952674.1 CDS Mvan_1847 NC_008726.1 1969966 1970718 D KEGG: sma:SAV1124 hypothetical protein; hypothetical protein 1969966..1970718 Mycobacterium vanbaalenii PYR-1 4644227 YP_952675.1 CDS Mvan_1848 NC_008726.1 1970828 1972030 D PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein; cytochrome P450 1970828..1972030 Mycobacterium vanbaalenii PYR-1 4644228 YP_952676.1 CDS Mvan_1849 NC_008726.1 1972043 1972231 D KEGG: mba:Mbar_A1947 hypothetical protein; hypothetical protein 1972043..1972231 Mycobacterium vanbaalenii PYR-1 4644229 YP_952677.1 CDS Mvan_1850 NC_008726.1 1972238 1973623 D PFAM: glutamine synthetase, catalytic region; KEGG: pub:SAR11_1305 GlnT-like protein; glutamate--ammonia ligase 1972238..1973623 Mycobacterium vanbaalenii PYR-1 4644230 YP_952678.1 CDS Mvan_1851 NC_008726.1 1973620 1974336 D PFAM: extracellular solute-binding protein, family 3; KEGG: mxa:MXAN_5503 amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family; extracellular solute-binding protein 1973620..1974336 Mycobacterium vanbaalenii PYR-1 4647866 YP_952679.1 CDS Mvan_1852 NC_008726.1 1974337 1975053 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rxy:Rxyl_1963 peptidase C26; peptidase C26 1974337..1975053 Mycobacterium vanbaalenii PYR-1 4647867 YP_952680.1 CDS Mvan_1853 NC_008726.1 1975050 1975862 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: sth:STH2933 putative glutamine amidotransferase; peptidase C26 1975050..1975862 Mycobacterium vanbaalenii PYR-1 4647868 YP_952681.1 CDS Mvan_1854 NC_008726.1 1975859 1977364 D PFAM: purine catabolism PurC domain protein; KEGG: tfu:Tfu_1795 helix-turn-helix, fis-type; purine catabolism PurC domain-containing protein 1975859..1977364 Mycobacterium vanbaalenii PYR-1 4647869 YP_952682.1 CDS Mvan_1855 NC_008726.1 1977306 1978430 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cjk:jk0193 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F complement(1977306..1978430) Mycobacterium vanbaalenii PYR-1 4647870 YP_952683.1 CDS Mvan_1856 NC_008726.1 1978427 1979893 R PFAM: aldehyde dehydrogenase; KEGG: gka:GK1411 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1978427..1979893) Mycobacterium vanbaalenii PYR-1 4647871 YP_952684.1 CDS Mvan_1857 NC_008726.1 1979890 1981095 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4147 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(1979890..1981095) Mycobacterium vanbaalenii PYR-1 4647872 YP_952685.1 CDS Mvan_1858 NC_008726.1 1981115 1982467 R TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: tfu:Tfu_0690 bacterial 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase complement(1981115..1982467) Mycobacterium vanbaalenii PYR-1 4647873 YP_952686.1 CDS Mvan_1859 NC_008726.1 1982594 1983133 D PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3544 isochorismatase hydrolase; isochorismatase hydrolase 1982594..1983133 Mycobacterium vanbaalenii PYR-1 4647874 YP_952687.1 CDS Mvan_1860 NC_008726.1 1983244 1983597 D KEGG: mmc:Mmcs_5298 hypothetical protein; hypothetical protein 1983244..1983597 Mycobacterium vanbaalenii PYR-1 4647875 YP_952688.1 CDS Mvan_1861 NC_008726.1 1983607 1984413 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR; KEGG: mmc:Mmcs_4213 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1983607..1984413) Mycobacterium vanbaalenii PYR-1 4647876 YP_952689.1 CDS Mvan_1862 NC_008726.1 1984468 1985373 D PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT3579 hydrolase, alpha/beta hydrolase fold family; alpha/beta hydrolase fold protein 1984468..1985373 Mycobacterium vanbaalenii PYR-1 4647877 YP_952690.1 CDS Mvan_1863 NC_008726.1 1985413 1988172 R PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_4; KEGG: mmc:Mmcs_0780 transcriptional regulator, LuxR family; regulatory protein LuxR complement(1985413..1988172) Mycobacterium vanbaalenii PYR-1 4647878 YP_952691.1 CDS Mvan_1864 NC_008726.1 1988258 1989232 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1554 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase complement(1988258..1989232) Mycobacterium vanbaalenii PYR-1 4647879 YP_952692.1 CDS Mvan_1865 NC_008726.1 1989352 1990329 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1555 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1989352..1990329 Mycobacterium vanbaalenii PYR-1 4647880 YP_952693.1 CDS Mvan_1866 NC_008726.1 1990330 1991673 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1556 amine oxidase (flavin-containing); amine oxidase complement(1990330..1991673) Mycobacterium vanbaalenii PYR-1 4647881 YP_952694.1 CDS Mvan_1867 NC_008726.1 1991832 1993361 D PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1558 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1991832..1993361 Mycobacterium vanbaalenii PYR-1 4647882 YP_952695.1 CDS Mvan_1868 NC_008726.1 1993365 1994480 R KEGG: mpa:MAP3225 hypothetical protein; hypothetical protein complement(1993365..1994480) Mycobacterium vanbaalenii PYR-1 4647883 YP_952696.1 CDS Mvan_1869 NC_008726.1 1994480 1995616 R PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP3224 hypothetical protein; aminoglycoside phosphotransferase complement(1994480..1995616) Mycobacterium vanbaalenii PYR-1 4647884 YP_952697.1 CDS Mvan_1870 NC_008726.1 1995682 1996284 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1561 transcriptional regulator, TetR family; TetR family transcriptional regulator 1995682..1996284 Mycobacterium vanbaalenii PYR-1 4647885 YP_952698.1 CDS Mvan_1871 NC_008726.1 1996303 1997079 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1996303..1997079) Mycobacterium vanbaalenii PYR-1 4647886 YP_952699.1 CDS Mvan_1872 NC_008726.1 1997093 1998664 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1997093..1998664) Mycobacterium vanbaalenii PYR-1 4647887 YP_952700.1 CDS Mvan_1873 NC_008726.1 1998661 2000241 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(1998661..2000241) Mycobacterium vanbaalenii PYR-1 4647888 YP_952701.1 CDS Mvan_1874 NC_008726.1 2000235 2002115 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(2000235..2002115) Mycobacterium vanbaalenii PYR-1 4647889 YP_952702.1 CDS Mvan_1875 NC_008726.1 2002123 2002422 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(2002123..2002422) Mycobacterium vanbaalenii PYR-1 4647890 YP_952703.1 CDS Mvan_1876 NC_008726.1 2002419 2003144 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(2002419..2003144) Mycobacterium vanbaalenii PYR-1 4645746 YP_952704.1 CDS Mvan_1877 NC_008726.1 2003154 2003678 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(2003154..2003678) Mycobacterium vanbaalenii PYR-1 4645747 YP_952705.1 CDS Mvan_1878 NC_008726.1 2003671 2004906 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(2003671..2004906) Mycobacterium vanbaalenii PYR-1 4645748 YP_952706.1 CDS Mvan_1879 NC_008726.1 2004903 2007302 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(2004903..2007302) Mycobacterium vanbaalenii PYR-1 4645749 YP_952707.1 CDS Mvan_1880 NC_008726.1 2007397 2008722 R KEGG: mmc:Mmcs_1575 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(2007397..2008722) Mycobacterium vanbaalenii PYR-1 4645750 YP_952708.1 CDS Mvan_1881 NC_008726.1 2008719 2009480 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(2008719..2009480) Mycobacterium vanbaalenii PYR-1 4645751 YP_952709.1 CDS Mvan_1882 NC_008726.1 2009477 2010805 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(2009477..2010805) Mycobacterium vanbaalenii PYR-1 4645752 YP_952710.1 CDS Mvan_1883 NC_008726.1 2010805 2011482 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(2010805..2011482) Mycobacterium vanbaalenii PYR-1 4645753 YP_952711.1 CDS Mvan_1884 NC_008726.1 2011479 2012033 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(2011479..2012033) Mycobacterium vanbaalenii PYR-1 4645754 YP_952712.1 CDS Mvan_1885 NC_008726.1 2012024 2012440 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: mmc:Mmcs_1580 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 complement(2012024..2012440) Mycobacterium vanbaalenii PYR-1 4645755 YP_952713.1 CDS Mvan_1886 NC_008726.1 2012564 2012983 R SMART: response regulator receiver; KEGG: mmc:Mmcs_1581 response regulator receiver protein; response regulator receiver protein complement(2012564..2012983) Mycobacterium vanbaalenii PYR-1 4645756 YP_952714.1 CDS Mvan_1887 NC_008726.1 2013086 2013487 R KEGG: mmc:Mmcs_1582 hypothetical protein; hypothetical protein complement(2013086..2013487) Mycobacterium vanbaalenii PYR-1 4645757 YP_952715.1 CDS Mvan_1888 NC_008726.1 2013529 2014158 D PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1583 methyltransferase type 11; type 11 methyltransferase 2013529..2014158 Mycobacterium vanbaalenii PYR-1 4645758 YP_952716.1 CDS Mvan_1889 NC_008726.1 2014166 2015038 R KEGG: mmc:Mmcs_3858 hydrolase; hydrolase complement(2014166..2015038) Mycobacterium vanbaalenii PYR-1 4645759 YP_952717.1 CDS Mvan_1890 NC_008726.1 2015035 2015364 R KEGG: mmc:Mmcs_1584 hypothetical protein; hypothetical protein complement(2015035..2015364) Mycobacterium vanbaalenii PYR-1 4645760 YP_952718.1 CDS Mvan_1891 NC_008726.1 2015545 2016597 R PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_1585 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2015545..2016597) Mycobacterium vanbaalenii PYR-1 4645761 YP_952719.1 CDS Mvan_1892 NC_008726.1 2016658 2017896 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1586 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2016658..2017896) Mycobacterium vanbaalenii PYR-1 4645762 YP_952720.1 CDS Mvan_1893 NC_008726.1 2017923 2018543 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP3195 hypothetical protein; TetR family transcriptional regulator complement(2017923..2018543) Mycobacterium vanbaalenii PYR-1 4645763 YP_952721.1 CDS Mvan_1894 NC_008726.1 2018550 2019455 R PFAM: pyruvate carboxyltransferase; KEGG: mmc:Mmcs_1588 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(2018550..2019455) Mycobacterium vanbaalenii PYR-1 4645764 YP_952722.1 CDS Mvan_1895 NC_008726.1 2019452 2020654 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1589 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2019452..2020654) Mycobacterium vanbaalenii PYR-1 4645765 YP_952723.1 CDS Mvan_1896 NC_008726.1 2020651 2021889 R KEGG: mpa:MAP3192 hypothetical protein; hypothetical protein complement(2020651..2021889) Mycobacterium vanbaalenii PYR-1 4645766 YP_952724.1 CDS Mvan_1897 NC_008726.1 2021892 2022983 R PFAM: homogentisate 1,2-dioxygenase; KEGG: mpa:MAP3191 hypothetical protein; homogentisate 1,2-dioxygenase complement(2021892..2022983) Mycobacterium vanbaalenii PYR-1 4645767 YP_952725.1 CDS Mvan_1899 NC_008726.1 2024729 2025121 R PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_1593 hypothetical protein; hypothetical protein complement(2024729..2025121) Mycobacterium vanbaalenii PYR-1 4645769 YP_952726.1 CDS Mvan_1900 NC_008726.1 2025137 2026303 R PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1594 acyl-CoA dehydrogenase, type 2-like protein; acyl-CoA dehydrogenase type 2 complement(2025137..2026303) Mycobacterium vanbaalenii PYR-1 4645770 YP_952727.1 CDS Mvan_1901 NC_008726.1 2026339 2026902 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1595 putative transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2026339..2026902) Mycobacterium vanbaalenii PYR-1 4647991 YP_952728.1 CDS Mvan_1902 NC_008726.1 2027291 2028265 D PFAM: putative esterase; KEGG: mmc:Mmcs_1596 putative esterase; putative esterase 2027291..2028265 Mycobacterium vanbaalenii PYR-1 4647992 YP_952729.1 CDS Mvan_1903 NC_008726.1 2028333 2029340 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1597 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 2028333..2029340 Mycobacterium vanbaalenii PYR-1 4647993 YP_952730.1 CDS Mvan_1904 NC_008726.1 2029550 2032594 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_1238 adenylate/guanylate cyclase; adenylyl cyclase class-3/4/guanylyl cyclase 2029550..2032594 Mycobacterium vanbaalenii PYR-1 4647994 YP_952731.1 CDS Mvan_1905 NC_008726.1 2032597 2033820 D KEGG: mmc:Mmcs_1269 glycosyltransferase, MGT family; glycosyl transferase family protein 2032597..2033820 Mycobacterium vanbaalenii PYR-1 4647995 YP_952732.1 CDS Mvan_1906 NC_008726.1 2033857 2035083 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1603 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2033857..2035083) Mycobacterium vanbaalenii PYR-1 4647996 YP_952733.1 CDS Mvan_1907 NC_008726.1 2035090 2036472 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1604 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2035090..2036472) Mycobacterium vanbaalenii PYR-1 4647997 YP_952734.1 CDS Mvan_1908 NC_008726.1 2036647 2037426 R KEGG: nfa:nfa44910 putative monophosphatase; TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; histidinol-phosphate phosphatase complement(2036647..2037426) Mycobacterium vanbaalenii PYR-1 4647998 YP_952735.1 CDS Mvan_1909 NC_008726.1 2037429 2037809 D KEGG: mpa:MAP3186c hypothetical protein; hypothetical protein 2037429..2037809 Mycobacterium vanbaalenii PYR-1 4647999 YP_952736.1 CDS Mvan_1910 NC_008726.1 2037814 2039193 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_1607 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2037814..2039193) Mycobacterium vanbaalenii PYR-1 4648000 YP_952737.1 CDS prfB NC_008726.1 2039390 2040496 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2039390..2040496 Mycobacterium vanbaalenii PYR-1 4648001 YP_952738.1 CDS Mvan_1912 NC_008726.1 2040486 2041463 D PFAM: MscS Mechanosensitive ion channel; KEGG: mmc:Mmcs_1609 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2040486..2041463 Mycobacterium vanbaalenii PYR-1 4648002 YP_952739.1 CDS Mvan_1913 NC_008726.1 2041460 2041978 D KEGG: mmc:Mmcs_1610 hypothetical protein; hypothetical protein 2041460..2041978 Mycobacterium vanbaalenii PYR-1 4648003 YP_952740.1 CDS Mvan_1914 NC_008726.1 2042023 2042712 D KEGG: mmc:Mmcs_1611 cell division protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; PFAM: ABC transporter related; SMART: AAA ATPase; type II secretory pathway family protein 2042023..2042712 Mycobacterium vanbaalenii PYR-1 4648004 YP_952741.1 CDS Mvan_1915 NC_008726.1 2042713 2043609 D PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1612 protein of unknown function DUF214; hypothetical protein 2042713..2043609 Mycobacterium vanbaalenii PYR-1 4648005 YP_952742.1 CDS smpB NC_008726.1 2043612 2044109 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2043612..2044109 Mycobacterium vanbaalenii PYR-1 4648006 YP_952743.1 CDS Mvan_1917 NC_008726.1 2044163 2044942 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_1614 protein of unknown function DUF6, transmembrane; hypothetical protein 2044163..2044942 Mycobacterium vanbaalenii PYR-1 4648007 YP_952744.1 CDS Mvan_1918 NC_008726.1 2044999 2047308 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_1615 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2044999..2047308 Mycobacterium vanbaalenii PYR-1 4648008 YP_952745.1 CDS Mvan_1919 NC_008726.1 2047815 2048621 R PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; KEGG: sma:SAV4657 MerR-family transcriptional regulator; MerR family transcriptional regulator complement(2047815..2048621) Mycobacterium vanbaalenii PYR-1 4648010 YP_952746.1 CDS Mvan_1920 NC_008726.1 2048639 2050141 D KEGG: nfa:nfa25540 putative short chain dehydrogenase; putative short chain dehydrogenase 2048639..2050141 Mycobacterium vanbaalenii PYR-1 4648011 YP_952747.1 CDS Mvan_1921 NC_008726.1 2050179 2050418 R hypothetical protein complement(2050179..2050418) Mycobacterium vanbaalenii PYR-1 4648012 YP_952748.1 CDS Mvan_1922 NC_008726.1 2050502 2051545 R PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: plu:plu2325 putative oxalate decarboxylase; cupin complement(2050502..2051545) Mycobacterium vanbaalenii PYR-1 4648013 YP_952749.1 CDS Mvan_1923 NC_008726.1 2051726 2052712 D KEGG: mmc:Mmcs_0647 hypothetical protein; hypothetical protein 2051726..2052712 Mycobacterium vanbaalenii PYR-1 4648014 YP_952750.1 CDS Mvan_1924 NC_008726.1 2052725 2053396 R PFAM: cutinase; KEGG: mmc:Mmcs_5300 cutinase; cutinase complement(2052725..2053396) Mycobacterium vanbaalenii PYR-1 4648161 YP_952751.1 CDS Mvan_1925 NC_008726.1 2053565 2054728 R PFAM: luciferase family protein; KEGG: mtc:MT3720 luciferase-related protein; luciferase family protein complement(2053565..2054728) Mycobacterium vanbaalenii PYR-1 4648162 YP_952752.1 CDS Mvan_1926 NC_008726.1 2054775 2055668 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_2376 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2054775..2055668) Mycobacterium vanbaalenii PYR-1 4648163 YP_952753.1 CDS Mvan_1927 NC_008726.1 2055711 2056307 D PFAM: regulatory protein, TetR; KEGG: sco:SCO0521 TetR family transcriptional regulator; TetR family transcriptional regulator 2055711..2056307 Mycobacterium vanbaalenii PYR-1 4648164 YP_952754.1 CDS Mvan_1928 NC_008726.1 2056330 2057184 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro07034 methyltransferase; type 11 methyltransferase complement(2056330..2057184) Mycobacterium vanbaalenii PYR-1 4648165 YP_952755.1 CDS Mvan_1929 NC_008726.1 2057305 2059893 R PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_2 repeat protein; KEGG: mlo:mll4526 transcriptional regulatory; regulatory protein LuxR complement(2057305..2059893) Mycobacterium vanbaalenii PYR-1 4648166 YP_952756.1 CDS Mvan_1930 NC_008726.1 2060067 2060348 D KEGG: pfo:Pfl_2091 hypothetical protein; hypothetical protein 2060067..2060348 Mycobacterium vanbaalenii PYR-1 4648167 YP_952757.1 CDS Mvan_1931 NC_008726.1 2060449 2064606 D KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; multi-sensor signal transduction histidine kinase 2060449..2064606 Mycobacterium vanbaalenii PYR-1 4648168 YP_952758.1 CDS Mvan_1932 NC_008726.1 2064603 2064917 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP2077c hypothetical protein; anti-sigma-factor antagonist 2064603..2064917 Mycobacterium vanbaalenii PYR-1 4648169 YP_952759.1 CDS Mvan_1933 NC_008726.1 2064920 2065876 R KEGG: mmc:Mmcs_5228 hypothetical protein; hypothetical protein complement(2064920..2065876) Mycobacterium vanbaalenii PYR-1 4648170 YP_952760.1 CDS Mvan_1934 NC_008726.1 2065980 2068013 D TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH0602 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein 2065980..2068013 Mycobacterium vanbaalenii PYR-1 4648171 YP_952761.1 CDS Mvan_1935 NC_008726.1 2068010 2069029 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bha:BH2947 immunogenic protein; TRAP transporter solute receptor TAXI family protein 2068010..2069029 Mycobacterium vanbaalenii PYR-1 4648172 YP_952762.1 CDS Mvan_1936 NC_008726.1 2069207 2072032 D TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein; transporter 2069207..2072032 Mycobacterium vanbaalenii PYR-1 4648173 YP_952763.1 CDS Mvan_1937 NC_008726.1 2072022 2072726 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpa:MAP0382c hypothetical protein; HAD family hydrolase complement(2072022..2072726) Mycobacterium vanbaalenii PYR-1 4648174 YP_952764.1 CDS Mvan_1938 NC_008726.1 2072770 2073843 R KEGG: mmc:Mmcs_3227 hypothetical protein; hypothetical protein complement(2072770..2073843) Mycobacterium vanbaalenii PYR-1 4648175 YP_952765.1 CDS Mvan_1939 NC_008726.1 2074062 2074997 D PFAM: protein of unknown function DUF808; KEGG: mmc:Mmcs_2667 protein of unknown function DUF808; hypothetical protein 2074062..2074997 Mycobacterium vanbaalenii PYR-1 4648176 YP_952766.1 CDS Mvan_1940 NC_008726.1 2075004 2076986 R KEGG: aor:AO090102000296 predicted protein; hypothetical protein complement(2075004..2076986) Mycobacterium vanbaalenii PYR-1 4648177 YP_952767.1 CDS Mvan_1941 NC_008726.1 2077073 2077267 R hypothetical protein complement(2077073..2077267) Mycobacterium vanbaalenii PYR-1 4648178 YP_952768.1 CDS Mvan_1942 NC_008726.1 2077298 2077720 D KEGG: mmc:Mmcs_1720 hypothetical protein; hypothetical protein 2077298..2077720 Mycobacterium vanbaalenii PYR-1 4648179 YP_952769.1 CDS Mvan_1943 NC_008726.1 2077857 2078456 D KEGG: mmc:Mmcs_1721 hypothetical protein; hypothetical protein 2077857..2078456 Mycobacterium vanbaalenii PYR-1 4648180 YP_952770.1 CDS Mvan_1944 NC_008726.1 2078453 2079631 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_1722 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2078453..2079631) Mycobacterium vanbaalenii PYR-1 4648181 YP_952771.1 CDS Mvan_1945 NC_008726.1 2079628 2081208 R converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis; long-chain-fatty-acid--CoA ligase complement(2079628..2081208) Mycobacterium vanbaalenii PYR-1 4648182 YP_952772.1 CDS Mvan_1946 NC_008726.1 2081205 2081384 R KEGG: mmc:Mmcs_1724 phosphopantetheine-binding protein; phosphopantetheine-binding protein complement(2081205..2081384) Mycobacterium vanbaalenii PYR-1 4648183 YP_952773.1 CDS Mvan_1947 NC_008726.1 2081528 2082553 R PFAM: protein of unknown function DUF190; KEGG: mbo:Mb3098 hypothetical protein; hypothetical protein complement(2081528..2082553) Mycobacterium vanbaalenii PYR-1 4648184 YP_952774.1 CDS Mvan_1948 NC_008726.1 2082550 2082918 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2082550..2082918) Mycobacterium vanbaalenii PYR-1 4648185 YP_952775.1 CDS Mvan_1949 NC_008726.1 2082915 2083310 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2082915..2083310) Mycobacterium vanbaalenii PYR-1 4645795 YP_952776.1 CDS Mvan_1950 NC_008726.1 2083342 2085033 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2083342..2085033 Mycobacterium vanbaalenii PYR-1 4645796 YP_952777.1 CDS Mvan_1951 NC_008726.1 2085047 2086369 D PFAM: General substrate transporter; protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1729 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2085047..2086369 Mycobacterium vanbaalenii PYR-1 4645797 YP_952778.1 CDS Mvan_1952 NC_008726.1 2086598 2086855 D KEGG: mmc:Mmcs_2601 hypothetical protein; hypothetical protein 2086598..2086855 Mycobacterium vanbaalenii PYR-1 4645799 YP_952779.1 CDS Mvan_1954 NC_008726.1 2087720 2088037 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 2087720..2088037 Mycobacterium vanbaalenii PYR-1 4645801 YP_952780.1 CDS Mvan_1955 NC_008726.1 2088034 2088927 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 2088034..2088927 Mycobacterium vanbaalenii PYR-1 4645802 YP_952781.1 CDS Mvan_1956 NC_008726.1 2088930 2089697 D KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein 2088930..2089697 Mycobacterium vanbaalenii PYR-1 4645803 YP_952782.1 CDS Mvan_1957 NC_008726.1 2089959 2090510 R KEGG: sme:SMb20139 hypothetical protein; hypothetical protein complement(2089959..2090510) Mycobacterium vanbaalenii PYR-1 4645804 YP_952783.1 CDS Mvan_1958 NC_008726.1 2090647 2090937 D hypothetical protein 2090647..2090937 Mycobacterium vanbaalenii PYR-1 4645805 YP_952784.1 CDS Mvan_1959 NC_008726.1 2090989 2091708 D KEGG: rfr:Rfer_2239 coenzyme F390 synthetase-like; coenzyme F390 synthetase-like protein 2090989..2091708 Mycobacterium vanbaalenii PYR-1 4645806 YP_952785.1 CDS Mvan_1960 NC_008726.1 2091639 2092928 R KEGG: mpa:MAP3549 hypothetical protein; hypothetical protein complement(2091639..2092928) Mycobacterium vanbaalenii PYR-1 4645807 YP_952786.1 CDS Mvan_1961 NC_008726.1 2092968 2093531 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP3548c hypothetical protein; TetR family transcriptional regulator 2092968..2093531 Mycobacterium vanbaalenii PYR-1 4645808 YP_952787.1 CDS Mvan_1962 NC_008726.1 2093528 2094640 D KEGG: mpa:MAP3547c hypothetical protein; hypothetical protein 2093528..2094640 Mycobacterium vanbaalenii PYR-1 4645809 YP_952788.1 CDS Mvan_1963 NC_008726.1 2094794 2095678 D PFAM: UspA domain protein; KEGG: mmc:Mmcs_0719 UspA; UspA domain-containing protein 2094794..2095678 Mycobacterium vanbaalenii PYR-1 4645810 YP_952789.1 CDS Mvan_1964 NC_008726.1 2095696 2096838 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1742 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2095696..2096838) Mycobacterium vanbaalenii PYR-1 4645811 YP_952790.1 CDS Mvan_1965 NC_008726.1 2096839 2098071 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_1743 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2096839..2098071) Mycobacterium vanbaalenii PYR-1 4645812 YP_952791.1 CDS Mvan_1966 NC_008726.1 2098400 2099242 D KEGG: mmc:Mmcs_1747 hypothetical protein; hypothetical protein 2098400..2099242 Mycobacterium vanbaalenii PYR-1 4645813 YP_952792.1 CDS Mvan_1967 NC_008726.1 2099223 2101076 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: mmc:Mmcs_1748 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2099223..2101076) Mycobacterium vanbaalenii PYR-1 4645814 YP_952793.1 CDS Mvan_1968 NC_008726.1 2101084 2103264 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mmc:Mmcs_1749 UBA/ThiF-type NAD/FAD binding fold; hypothetical protein complement(2101084..2103264) Mycobacterium vanbaalenii PYR-1 4645815 YP_952794.1 CDS Mvan_1969 NC_008726.1 2103261 2104010 R KEGG: mmc:Mmcs_1750 hypothetical protein; hypothetical protein complement(2103261..2104010) Mycobacterium vanbaalenii PYR-1 4645816 YP_952795.1 CDS Mvan_1970 NC_008726.1 2104564 2105070 D PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_1751 MaoC-like dehydratase; dehydratase 2104564..2105070 Mycobacterium vanbaalenii PYR-1 4645817 YP_952796.1 CDS Mvan_1971 NC_008726.1 2105166 2106506 D PFAM: flavin-containing monooxygenase FMO; KEGG: mmc:Mmcs_1752 dimethylaniline monooxygenase (N-oxide forming); dimethylaniline monooxygenase 2105166..2106506 Mycobacterium vanbaalenii PYR-1 4645818 YP_952797.1 CDS Mvan_1972 NC_008726.1 2106503 2107411 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1754 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2106503..2107411 Mycobacterium vanbaalenii PYR-1 4647891 YP_952798.1 CDS Mvan_1973 NC_008726.1 2107382 2108200 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2410 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(2107382..2108200) Mycobacterium vanbaalenii PYR-1 4647892 YP_952799.1 CDS Mvan_1974 NC_008726.1 2108197 2109375 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1756 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2108197..2109375) Mycobacterium vanbaalenii PYR-1 4647893 YP_952800.1 CDS fabG NC_008726.1 2109487 2110245 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2109487..2110245 Mycobacterium vanbaalenii PYR-1 4647894 YP_952801.1 CDS Mvan_1976 NC_008726.1 2110242 2111459 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2110242..2111459 Mycobacterium vanbaalenii PYR-1 4647895 YP_952802.1 CDS Mvan_1977 NC_008726.1 2111490 2112683 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1759 acyl-CoA dehydrogenase-like protein; butyryl-CoA dehydrogenase 2111490..2112683 Mycobacterium vanbaalenii PYR-1 4647896 YP_952803.1 CDS Mvan_1978 NC_008726.1 2112689 2113357 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_1760 transcriptional regulator, GntR family; GntR family transcriptional regulator 2112689..2113357 Mycobacterium vanbaalenii PYR-1 4647897 YP_952804.1 CDS Mvan_1979 NC_008726.1 2113438 2114622 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0617 CaiB/BaiF family protein; L-carnitine dehydratase/bile acid-inducible protein F 2113438..2114622 Mycobacterium vanbaalenii PYR-1 4647898 YP_952805.1 CDS Mvan_1980 NC_008726.1 2114628 2116130 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1761 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2114628..2116130) Mycobacterium vanbaalenii PYR-1 4647899 YP_952806.1 CDS Mvan_1981 NC_008726.1 2116127 2117692 R PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35; AMP-dependent synthetase and ligase complement(2116127..2117692) Mycobacterium vanbaalenii PYR-1 4647900 YP_952807.1 CDS Mvan_1982 NC_008726.1 2117689 2119137 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1763 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2117689..2119137) Mycobacterium vanbaalenii PYR-1 4647901 YP_952808.1 CDS Mvan_1983 NC_008726.1 2119134 2119913 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1764 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2119134..2119913) Mycobacterium vanbaalenii PYR-1 4647902 YP_952809.1 CDS Mvan_1984 NC_008726.1 2119922 2120734 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2398 hypothetical protein; enoyl-CoA hydratase/isomerase complement(2119922..2120734) Mycobacterium vanbaalenii PYR-1 4647903 YP_952810.1 CDS Mvan_1985 NC_008726.1 2120748 2121548 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1766 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2120748..2121548) Mycobacterium vanbaalenii PYR-1 4647904 YP_952811.1 CDS Mvan_1986 NC_008726.1 2121659 2122435 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mpa:MAP2347 hypothetical protein; regulatory protein GntR 2121659..2122435 Mycobacterium vanbaalenii PYR-1 4647905 YP_952812.1 CDS Mvan_1987 NC_008726.1 2122464 2123363 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2395c hypothetical protein; enoyl-CoA hydratase/isomerase 2122464..2123363 Mycobacterium vanbaalenii PYR-1 4647906 YP_952813.1 CDS Mvan_1988 NC_008726.1 2123447 2124622 D KEGG: mmc:Mmcs_1769 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase 2123447..2124622 Mycobacterium vanbaalenii PYR-1 4647907 YP_952814.1 CDS Mvan_1989 NC_008726.1 2124705 2125457 R PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mpa:MAP2394 hypothetical protein; TetR family transcriptional regulator complement(2124705..2125457) Mycobacterium vanbaalenii PYR-1 4647908 YP_952815.1 CDS Mvan_1990 NC_008726.1 2125713 2126474 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2125713..2126474 Mycobacterium vanbaalenii PYR-1 4647909 YP_952816.1 CDS Mvan_1991 NC_008726.1 2126501 2127298 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2393c hypothetical protein; short-chain dehydrogenase/reductase SDR 2126501..2127298 Mycobacterium vanbaalenii PYR-1 4647910 YP_952817.1 CDS Mvan_1993 NC_008726.1 2127875 2128759 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2127875..2128759 Mycobacterium vanbaalenii PYR-1 4647912 YP_952818.1 CDS Mvan_1994 NC_008726.1 2128756 2130003 D PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2; amidohydrolase 2 2128756..2130003 Mycobacterium vanbaalenii PYR-1 4647913 YP_952819.1 CDS Mvan_1995 NC_008726.1 2130007 2131632 D activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 2130007..2131632 Mycobacterium vanbaalenii PYR-1 4647914 YP_952820.1 CDS Mvan_1996 NC_008726.1 2131629 2132468 D PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1776 amidohydrolase 2; amidohydrolase 2 2131629..2132468 Mycobacterium vanbaalenii PYR-1 4647915 YP_952821.1 CDS Mvan_1997 NC_008726.1 2132471 2133511 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP2386c hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 2132471..2133511 Mycobacterium vanbaalenii PYR-1 4645320 YP_952822.1 CDS Mvan_1998 NC_008726.1 2133515 2134699 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_1778 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 2133515..2134699 Mycobacterium vanbaalenii PYR-1 4645321 YP_952823.1 CDS Mvan_1999 NC_008726.1 2134790 2135935 R PFAM: Thiolase; KEGG: mmc:Mmcs_1779 thiolase; thiolase complement(2134790..2135935) Mycobacterium vanbaalenii PYR-1 4645322 YP_952824.1 CDS Mvan_2000 NC_008726.1 2135970 2136812 R KEGG: mmc:Mmcs_2017 hypothetical protein; hypothetical protein complement(2135970..2136812) Mycobacterium vanbaalenii PYR-1 4645323 YP_952825.1 CDS Mvan_2001 NC_008726.1 2136871 2138088 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_3698 cytochrome P450; cytochrome P450 2136871..2138088 Mycobacterium vanbaalenii PYR-1 4645324 YP_952826.1 CDS Mvan_2002 NC_008726.1 2138145 2138519 R KEGG: mtc:MT2028 hypothetical protein; hypothetical protein complement(2138145..2138519) Mycobacterium vanbaalenii PYR-1 4645325 YP_952827.1 CDS Mvan_2003 NC_008726.1 2138564 2140744 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_2009 formate dehydrogenase; molybdopterin oxidoreductase 2138564..2140744 Mycobacterium vanbaalenii PYR-1 4645326 YP_952828.1 CDS Mvan_2005 NC_008726.1 2142160 2143710 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1781 aldehyde dehydrogenase; aldehyde dehydrogenase 2142160..2143710 Mycobacterium vanbaalenii PYR-1 4645328 YP_952829.1 CDS Mvan_2006 NC_008726.1 2143726 2144574 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1489c hypothetical protein; short-chain dehydrogenase/reductase SDR 2143726..2144574 Mycobacterium vanbaalenii PYR-1 4645329 YP_952830.1 CDS Mvan_2007 NC_008726.1 2144549 2145763 R PFAM: cytochrome P450; KEGG: mpa:MAP2382 hypothetical protein; cytochrome P450 complement(2144549..2145763) Mycobacterium vanbaalenii PYR-1 4645330 YP_952831.1 CDS Mvan_2008 NC_008726.1 2145808 2146593 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: xac:XAC0353 3-alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2145808..2146593) Mycobacterium vanbaalenii PYR-1 4645331 YP_952832.1 CDS Mvan_2009 NC_008726.1 2146729 2148210 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1784 aldehyde dehydrogenase; aldehyde dehydrogenase 2146729..2148210 Mycobacterium vanbaalenii PYR-1 4645332 YP_952833.1 CDS Mvan_2010 NC_008726.1 2148197 2149849 R activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase complement(2148197..2149849) Mycobacterium vanbaalenii PYR-1 4645333 YP_952834.1 CDS Mvan_2011 NC_008726.1 2149916 2150530 R PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase; isochorismatase hydrolase complement(2149916..2150530) Mycobacterium vanbaalenii PYR-1 4645334 YP_952835.1 CDS Mvan_2012 NC_008726.1 2150527 2151546 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(2150527..2151546) Mycobacterium vanbaalenii PYR-1 4645335 YP_952836.1 CDS Mvan_2013 NC_008726.1 2151670 2153298 D PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP2376c hypothetical protein; cyclohexanone monooxygenase 2151670..2153298 Mycobacterium vanbaalenii PYR-1 4645336 YP_952837.1 CDS Mvan_2014 NC_008726.1 2153295 2154401 D KEGG: mmc:Mmcs_1791 hypothetical protein; hypothetical protein 2153295..2154401 Mycobacterium vanbaalenii PYR-1 4645337 YP_952838.1 CDS Mvan_2015 NC_008726.1 2154418 2155029 R PFAM: regulatory protein, TetR; KEGG: sma:SAV431 TetR-family transcriptional regulator; TetR family transcriptional regulator complement(2154418..2155029) Mycobacterium vanbaalenii PYR-1 4645338 YP_952839.1 CDS Mvan_2016 NC_008726.1 2155096 2156199 D PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2155096..2156199 Mycobacterium vanbaalenii PYR-1 4645339 YP_952840.1 CDS Mvan_2017 NC_008726.1 2156196 2156570 D KEGG: mmc:Mmcs_1792 protein of unknown function DUF1486; hypothetical protein 2156196..2156570 Mycobacterium vanbaalenii PYR-1 4645340 YP_952841.1 CDS Mvan_2018 NC_008726.1 2156567 2157610 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_1793 luciferase-like protein; luciferase family protein 2156567..2157610 Mycobacterium vanbaalenii PYR-1 4645341 YP_952842.1 CDS Mvan_2019 NC_008726.1 2157666 2159162 R PFAM: carboxyl transferase; KEGG: mpa:MAP2372 AccD4_2; propionyl-CoA carboxylase complement(2157666..2159162) Mycobacterium vanbaalenii PYR-1 4645342 YP_952843.1 CDS Mvan_2020 NC_008726.1 2159241 2160272 D KEGG: mmc:Mmcs_1795 putative oxidoreductase; putative oxidoreductase 2159241..2160272 Mycobacterium vanbaalenii PYR-1 4645343 YP_952844.1 CDS Mvan_2021 NC_008726.1 2160287 2161525 D PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein; cytochrome P450 2160287..2161525 Mycobacterium vanbaalenii PYR-1 4645344 YP_952845.1 CDS Mvan_2022 NC_008726.1 2161615 2162922 R PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein; amidohydrolase 2 complement(2161615..2162922) Mycobacterium vanbaalenii PYR-1 4647223 YP_952846.1 CDS Mvan_2023 NC_008726.1 2162978 2163115 R KEGG: mmc:Mmcs_1797 hypothetical protein; hypothetical protein complement(2162978..2163115) Mycobacterium vanbaalenii PYR-1 4647224 YP_952847.1 CDS Mvan_2024 NC_008726.1 2163115 2165418 R PFAM: carbon starvation protein CstA; KEGG: mmc:Mmcs_1798 carbon starvation protein CstA; carbon starvation protein CstA complement(2163115..2165418) Mycobacterium vanbaalenii PYR-1 4647225 YP_952848.1 CDS ligB NC_008726.1 2165517 2167121 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(2165517..2167121) Mycobacterium vanbaalenii PYR-1 4647226 YP_952849.1 CDS Mvan_2026 NC_008726.1 2167204 2168721 R PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mmc:Mmcs_1801 oxidoreductase, molybdopterin binding protein; molybdopterin binding oxidoreductase complement(2167204..2168721) Mycobacterium vanbaalenii PYR-1 4647227 YP_952850.1 CDS Mvan_2027 NC_008726.1 2168838 2169605 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1802 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2168838..2169605 Mycobacterium vanbaalenii PYR-1 4647228 YP_952851.1 CDS Mvan_2028 NC_008726.1 2169681 2170733 D PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_1805 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2169681..2170733 Mycobacterium vanbaalenii PYR-1 4647229 YP_952852.1 CDS Mvan_2029 NC_008726.1 2170734 2171501 R PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_1806 protein of unknown function DUF81; hypothetical protein complement(2170734..2171501) Mycobacterium vanbaalenii PYR-1 4647230 YP_952853.1 CDS Mvan_2030 NC_008726.1 2171735 2172184 D KEGG: mmc:Mmcs_1807 hypothetical protein; hypothetical protein 2171735..2172184 Mycobacterium vanbaalenii PYR-1 4647231 YP_952854.1 CDS Mvan_2031 NC_008726.1 2172259 2173740 R PFAM: cytochrome P450; KEGG: mpa:MAP3109 probable cytochrome P450 136 CYP136; cytochrome P450 complement(2172259..2173740) Mycobacterium vanbaalenii PYR-1 4647232 YP_952855.1 CDS Mvan_2032 NC_008726.1 2173869 2174510 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1809 transcriptional regulator, TetR family; TetR family transcriptional regulator 2173869..2174510 Mycobacterium vanbaalenii PYR-1 4647233 YP_952856.1 CDS Mvan_2033 NC_008726.1 2174507 2174809 R KEGG: mmc:Mmcs_3829 hypothetical protein; hypothetical protein complement(2174507..2174809) Mycobacterium vanbaalenii PYR-1 4647234 YP_952857.1 CDS Mvan_2034 NC_008726.1 2174861 2175733 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1810 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2174861..2175733 Mycobacterium vanbaalenii PYR-1 4647235 YP_952858.1 CDS Mvan_2035 NC_008726.1 2175738 2176904 R KEGG: mmc:Mmcs_1811 hypothetical protein; hypothetical protein complement(2175738..2176904) Mycobacterium vanbaalenii PYR-1 4647236 YP_952859.1 CDS Mvan_2036 NC_008726.1 2177060 2177764 R PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein; putative GAF sensor protein complement(2177060..2177764) Mycobacterium vanbaalenii PYR-1 4647237 YP_952860.1 CDS Mvan_2037 NC_008726.1 2177831 2178895 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2177831..2178895) Mycobacterium vanbaalenii PYR-1 4647238 YP_952861.1 CDS Mvan_2038 NC_008726.1 2178892 2179518 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP3105 hypothetical protein; TetR family transcriptional regulator complement(2178892..2179518) Mycobacterium vanbaalenii PYR-1 4647239 YP_952862.1 CDS Mvan_2039 NC_008726.1 2179571 2180158 D PFAM: NADPH-dependent FMN reductase; KEGG: mmc:Mmcs_1814 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2179571..2180158 Mycobacterium vanbaalenii PYR-1 4647240 YP_952863.1 CDS Mvan_2040 NC_008726.1 2180908 2181159 D TIGRFAM: Glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: mmc:Mmcs_1815 glutaredoxin-like protein NrdH; glutaredoxin-like protein NrdH 2180908..2181159 Mycobacterium vanbaalenii PYR-1 4647241 YP_952864.1 CDS nrdI NC_008726.1 2181229 2181687 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 2181229..2181687 Mycobacterium vanbaalenii PYR-1 4647242 YP_952865.1 CDS Mvan_2042 NC_008726.1 2181654 2183822 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2181654..2183822 Mycobacterium vanbaalenii PYR-1 4647243 YP_952866.1 CDS Mvan_2043 NC_008726.1 2184966 2185139 D hypothetical protein 2184966..2185139 Mycobacterium vanbaalenii PYR-1 4647244 YP_952867.1 CDS Mvan_2044 NC_008726.1 2185246 2185632 R KEGG: mmc:Mmcs_1819 hypothetical protein; hypothetical protein complement(2185246..2185632) Mycobacterium vanbaalenii PYR-1 4647245 YP_952868.1 CDS Mvan_2045 NC_008726.1 2185674 2186387 D PFAM: LysR, substrate-binding; KEGG: mmc:Mmcs_1820 transcriptional regulator, LysR family; LysR family transcriptional regulator 2185674..2186387 Mycobacterium vanbaalenii PYR-1 4647246 YP_952869.1 CDS Mvan_2046 NC_008726.1 2186606 2187100 D KEGG: nfa:nfa7600 hypothetical protein; hypothetical protein 2186606..2187100 Mycobacterium vanbaalenii PYR-1 4647247 YP_952870.1 CDS Mvan_2047 NC_008726.1 2187097 2187798 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component; ABC transporter--like protein 2187097..2187798 Mycobacterium vanbaalenii PYR-1 4647248 YP_952871.1 CDS Mvan_2048 NC_008726.1 2187810 2188577 D KEGG: cef:CE2583 ABC-2 type transport system permease protein; hypothetical protein 2187810..2188577 Mycobacterium vanbaalenii PYR-1 4646723 YP_952872.1 CDS Mvan_2049 NC_008726.1 2188570 2189370 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP2727 hypothetical protein; type 11 methyltransferase 2188570..2189370 Mycobacterium vanbaalenii PYR-1 4646724 YP_952873.1 CDS Mvan_2050 NC_008726.1 2189383 2190060 D KEGG: nfa:nfa9910 hypothetical protein; putative transcriptional regulator 2189383..2190060 Mycobacterium vanbaalenii PYR-1 4646725 YP_952874.1 CDS Mvan_2051 NC_008726.1 2190086 2190418 D KEGG: mmc:Mmcs_4488 hypothetical protein; hypothetical protein 2190086..2190418 Mycobacterium vanbaalenii PYR-1 4646726 YP_952875.1 CDS Mvan_2052 NC_008726.1 2190423 2190839 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1345 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2190423..2190839) Mycobacterium vanbaalenii PYR-1 4646727 YP_952876.1 CDS Mvan_2053 NC_008726.1 2190842 2191249 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV6424 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2190842..2191249) Mycobacterium vanbaalenii PYR-1 4646728 YP_952877.1 CDS Mvan_2054 NC_008726.1 2191309 2191872 R KEGG: ath:At3g50340 expressed protein; hypothetical protein complement(2191309..2191872) Mycobacterium vanbaalenii PYR-1 4646729 YP_952878.1 CDS Mvan_2055 NC_008726.1 2191889 2193070 R TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1826 geranylgeranyl reductase; geranylgeranyl reductase complement(2191889..2193070) Mycobacterium vanbaalenii PYR-1 4646730 YP_952879.1 CDS Mvan_2056 NC_008726.1 2193213 2193974 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1827 transcriptional regulator, TetR family; TetR family transcriptional regulator 2193213..2193974 Mycobacterium vanbaalenii PYR-1 4646731 YP_952880.1 CDS Mvan_2057 NC_008726.1 2194109 2194855 D KEGG: mpa:MAP3353c hypothetical protein; hypothetical protein 2194109..2194855 Mycobacterium vanbaalenii PYR-1 4646732 YP_952881.1 CDS Mvan_2058 NC_008726.1 2194887 2196452 D PFAM: regulatory protein, LuxR; metal-dependent phosphohydrolase, HD sub domain; Bacterio-opsin activator, HTH domain protein; KEGG: mpa:MAP3352c hypothetical protein; metal dependent phosphohydrolase 2194887..2196452 Mycobacterium vanbaalenii PYR-1 4646733 YP_952882.1 CDS Mvan_2059 NC_008726.1 2196565 2198085 D KEGG: mbo:Mb3075c probable monooxygenase; putative monooxygenase 2196565..2198085 Mycobacterium vanbaalenii PYR-1 4646734 YP_952883.1 CDS nrdF NC_008726.1 2198215 2199189 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 2198215..2199189 Mycobacterium vanbaalenii PYR-1 4646735 YP_952884.1 CDS Mvan_2061 NC_008726.1 2199244 2200104 R hypothetical protein complement(2199244..2200104) Mycobacterium vanbaalenii PYR-1 4646736 YP_952885.1 CDS Mvan_2062 NC_008726.1 2200460 2200741 R hypothetical protein complement(2200460..2200741) Mycobacterium vanbaalenii PYR-1 4646737 YP_952886.1 CDS Mvan_2063 NC_008726.1 2200741 2200983 R hypothetical protein complement(2200741..2200983) Mycobacterium vanbaalenii PYR-1 4646738 YP_952887.1 CDS Mvan_2064 NC_008726.1 2201032 2201322 D hypothetical protein 2201032..2201322 Mycobacterium vanbaalenii PYR-1 4646739 YP_952888.1 CDS Mvan_2066 NC_008726.1 2202181 2203500 R PFAM: transposase, mutator type; KEGG: mmc:Mmcs_5459 transposase, mutator type; transposase, mutator type complement(2202181..2203500) Mycobacterium vanbaalenii PYR-1 4646741 YP_952889.1 CDS Mvan_2068 NC_008726.1 2204862 2206160 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein 2204862..2206160 Mycobacterium vanbaalenii PYR-1 4646743 YP_952890.1 CDS Mvan_2069 NC_008726.1 2206636 2206884 D hypothetical protein 2206636..2206884 Mycobacterium vanbaalenii PYR-1 4646744 YP_952891.1 CDS Mvan_2070 NC_008726.1 2206874 2207218 R KEGG: chu:CHU_3333 short-chain alcohol dehydrogenase/reductase; hypothetical protein complement(2206874..2207218) Mycobacterium vanbaalenii PYR-1 4646745 YP_952892.1 CDS Mvan_2071 NC_008726.1 2207325 2209502 R KEGG: tfu:Tfu_0329 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(2207325..2209502) Mycobacterium vanbaalenii PYR-1 4646746 YP_952893.1 CDS Mvan_2072 NC_008726.1 2209524 2209958 D PFAM: response regulator receiver; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family; response regulator receiver protein 2209524..2209958 Mycobacterium vanbaalenii PYR-1 4646747 YP_952894.1 CDS Mvan_2073 NC_008726.1 2209936 2210589 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sma:SAV4878 two-component system response regulator; two component LuxR family transcriptional regulator complement(2209936..2210589) Mycobacterium vanbaalenii PYR-1 4646573 YP_952895.1 CDS Mvan_2074 NC_008726.1 2210815 2212362 R PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein; transposase, IS4 family protein complement(2210815..2212362) Mycobacterium vanbaalenii PYR-1 4646574 YP_952896.1 CDS Mvan_2075 NC_008726.1 2212496 2214667 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bcn:Bcen_2339 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase 2212496..2214667 Mycobacterium vanbaalenii PYR-1 4646575 YP_952897.1 CDS Mvan_2076 NC_008726.1 2214648 2215214 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ava:Ava_C0128 ferredoxin; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2214648..2215214 Mycobacterium vanbaalenii PYR-1 4646576 YP_952898.1 CDS Mvan_2077 NC_008726.1 2215211 2216197 D PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bcn:Bcen_2340 molybdopterin dehydrogenase, FAD-binding; FAD-binding molybdopterin dehydrogenase 2215211..2216197 Mycobacterium vanbaalenii PYR-1 4646577 YP_952899.1 CDS Mvan_2078 NC_008726.1 2216201 2217784 R PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_0199 amino acid permease-associated region; amino acid permease-associated protein complement(2216201..2217784) Mycobacterium vanbaalenii PYR-1 4646578 YP_952900.1 CDS Mvan_2079 NC_008726.1 2218044 2218364 D KEGG: mpa:MAP3094c hypothetical protein; hypothetical protein 2218044..2218364 Mycobacterium vanbaalenii PYR-1 4646579 YP_952901.1 CDS Mvan_2080 NC_008726.1 2218368 2219414 R PFAM: alanine dehydrogenase/PNT domain protein; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1836 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase complement(2218368..2219414) Mycobacterium vanbaalenii PYR-1 4646580 YP_952902.1 CDS Mvan_2081 NC_008726.1 2219549 2220691 R PFAM: periplasmic binding protein; KEGG: mmc:Mmcs_1851 periplasmic binding protein; periplasmic binding protein complement(2219549..2220691) Mycobacterium vanbaalenii PYR-1 4646581 YP_952903.1 CDS Mvan_2082 NC_008726.1 2220885 2222630 D PFAM: cytochrome c oxidase, subunit I; KEGG: mmc:Mmcs_1852 cytochrome-c oxidase; cytochrome-c oxidase 2220885..2222630 Mycobacterium vanbaalenii PYR-1 4646582 YP_952904.1 CDS Mvan_2083 NC_008726.1 2222656 2223915 D KEGG: mmc:Mmcs_1853 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; phosphoserine phosphatase SerB 2222656..2223915 Mycobacterium vanbaalenii PYR-1 4646583 YP_952905.1 CDS Mvan_2084 NC_008726.1 2223925 2225439 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: mmc:Mmcs_1854 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2223925..2225439) Mycobacterium vanbaalenii PYR-1 4646584 YP_952906.1 CDS Mvan_2085 NC_008726.1 2225583 2226284 D PFAM: protein of unknown function DUF161; KEGG: mmc:Mmcs_1855 protein of unknown function DUF161; hypothetical protein 2225583..2226284 Mycobacterium vanbaalenii PYR-1 4646585 YP_952907.1 CDS frcK NC_008726.1 2226262 2226912 D KEGG: sco:SCO0723 hypothetical protein; putative fructose transport system kinase 2226262..2226912 Mycobacterium vanbaalenii PYR-1 4646586 YP_952908.1 CDS Mvan_2087 NC_008726.1 2226953 2227789 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_1856 ABC transporter related; ABC transporter--like protein 2226953..2227789 Mycobacterium vanbaalenii PYR-1 4646587 YP_952909.1 CDS Mvan_2088 NC_008726.1 2227789 2228622 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_1857 NUDIX hydrolase; NUDIX hydrolase 2227789..2228622 Mycobacterium vanbaalenii PYR-1 4646588 YP_952910.1 CDS Mvan_2089 NC_008726.1 2228619 2229296 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2228619..2229296 Mycobacterium vanbaalenii PYR-1 4646589 YP_952911.1 CDS Mvan_2090 NC_008726.1 2229307 2230332 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1859 methyltransferase type 11; type 11 methyltransferase 2229307..2230332 Mycobacterium vanbaalenii PYR-1 4646590 YP_952912.1 CDS Mvan_2091 NC_008726.1 2230350 2231495 D KEGG: mmc:Mmcs_1860 hypothetical protein; hypothetical protein 2230350..2231495 Mycobacterium vanbaalenii PYR-1 4646591 YP_952913.1 CDS Mvan_2092 NC_008726.1 2231578 2232312 D KEGG: mmc:Mmcs_1861 immunogenic protein MPB64/MPT64 precursor; immunogenic protein MPB64/MPT64 2231578..2232312 Mycobacterium vanbaalenii PYR-1 4646592 YP_952914.1 CDS Mvan_2093 NC_008726.1 2232299 2233852 R TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: mmc:Mmcs_1862 amino acid carrier protein; amino acid carrier protein complement(2232299..2233852) Mycobacterium vanbaalenii PYR-1 4646593 YP_952915.1 CDS Mvan_2094 NC_008726.1 2233971 2235260 R PFAM: Pyrrolo-quinoline quinone; KEGG: mmc:Mmcs_1863 hypothetical protein; Pyrrolo-quinoline quinone complement(2233971..2235260) Mycobacterium vanbaalenii PYR-1 4646594 YP_952916.1 CDS Mvan_2095 NC_008726.1 2235392 2236129 D PFAM: transferase hexapeptide repeat containing protein; KEGG: mmc:Mmcs_1864 putative transferase; hexapaptide repeat-containing transferase 2235392..2236129 Mycobacterium vanbaalenii PYR-1 4646595 YP_952917.1 CDS Mvan_2096 NC_008726.1 2236155 2237387 R PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: mpa:MAP3064 hypothetical protein; group 1 glycosyl transferase complement(2236155..2237387) Mycobacterium vanbaalenii PYR-1 4646596 YP_952918.1 CDS Mvan_2097 NC_008726.1 2237384 2238982 R PFAM: glycoside hydrolase, family 57; KEGG: mmc:Mmcs_1868 glycoside hydrolase, family 57; glycoside hydrolase family protein complement(2237384..2238982) Mycobacterium vanbaalenii PYR-1 4646597 YP_952919.1 CDS Mvan_2098 NC_008726.1 2238979 2239770 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1869 methyltransferase type 11; type 11 methyltransferase complement(2238979..2239770) Mycobacterium vanbaalenii PYR-1 4647274 YP_952920.1 CDS Mvan_2099 NC_008726.1 2239978 2240769 D PFAM: electron transfer flavoprotein beta-subunit; KEGG: mmc:Mmcs_1870 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 2239978..2240769 Mycobacterium vanbaalenii PYR-1 4647275 YP_952921.1 CDS Mvan_2100 NC_008726.1 2240811 2241767 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: mmc:Mmcs_1871 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 2240811..2241767 Mycobacterium vanbaalenii PYR-1 4647276 YP_952922.1 CDS Mvan_2101 NC_008726.1 2241920 2242654 D PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: bbr:BB3700 hypothetical protein; dTDP-4-dehydrorhamnose reductase 2241920..2242654 Mycobacterium vanbaalenii PYR-1 4647277 YP_952923.1 CDS Mvan_2102 NC_008726.1 2242663 2243067 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: sco:SCO7126 hypothetical protein; cupin 2242663..2243067 Mycobacterium vanbaalenii PYR-1 4647278 YP_952924.1 CDS Mvan_2103 NC_008726.1 2243194 2244057 D KEGG: mmc:Mmcs_1873 hypothetical protein; hypothetical protein 2243194..2244057 Mycobacterium vanbaalenii PYR-1 4647279 YP_952925.1 CDS Mvan_2104 NC_008726.1 2244054 2244938 D PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_1874 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2244054..2244938 Mycobacterium vanbaalenii PYR-1 4647280 YP_952926.1 CDS Mvan_2105 NC_008726.1 2244985 2246178 D PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mmc:Mmcs_1875 aminotransferase, class V; class V aminotransferase 2244985..2246178 Mycobacterium vanbaalenii PYR-1 4647281 YP_952927.1 CDS mnmA NC_008726.1 2246181 2247254 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2246181..2247254 Mycobacterium vanbaalenii PYR-1 4647282 YP_952928.1 CDS Mvan_2107 NC_008726.1 2247263 2247901 R KEGG: mmc:Mmcs_1877 LpqA; LpqA complement(2247263..2247901) Mycobacterium vanbaalenii PYR-1 4647283 YP_952929.1 CDS Mvan_2108 NC_008726.1 2247937 2248947 D PFAM: Methionine synthase, vitamin-B12 independent; KEGG: mmc:Mmcs_1878 methionine synthase, vitamin-B12 independent; methionine synthase, vitamin-B12 independent 2247937..2248947 Mycobacterium vanbaalenii PYR-1 4647284 YP_952930.1 CDS Mvan_2109 NC_008726.1 2249015 2250814 D KEGG: xcv:XCV4470 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 2249015..2250814 Mycobacterium vanbaalenii PYR-1 4647285 YP_952931.1 CDS Mvan_2110 NC_008726.1 2250821 2252470 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1879 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2250821..2252470) Mycobacterium vanbaalenii PYR-1 4647286 YP_952932.1 CDS Mvan_2111 NC_008726.1 2252502 2252909 R KEGG: mmc:Mmcs_1880 phosphoribosylglycinamide formyltransferase protein; phosphoribosylglycinamide formyltransferase protein complement(2252502..2252909) Mycobacterium vanbaalenii PYR-1 4647287 YP_952933.1 CDS ligA NC_008726.1 2252981 2255104 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 2252981..2255104 Mycobacterium vanbaalenii PYR-1 4647288 YP_952934.1 CDS Mvan_2113 NC_008726.1 2255152 2255820 R PFAM: amino acid-binding ACT domain protein; KEGG: mmc:Mmcs_1889 amino acid-binding ACT; amino acid-binding ACT domain-containing protein complement(2255152..2255820) Mycobacterium vanbaalenii PYR-1 4647289 YP_952935.1 CDS gatC NC_008726.1 2255918 2256217 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2255918..2256217 Mycobacterium vanbaalenii PYR-1 4647290 YP_952936.1 CDS gatA NC_008726.1 2256214 2257710 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2256214..2257710 Mycobacterium vanbaalenii PYR-1 4647291 YP_952937.1 CDS Mvan_2116 NC_008726.1 2257728 2258759 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 2257728..2258759 Mycobacterium vanbaalenii PYR-1 4647292 YP_952938.1 CDS gatB NC_008726.1 2258861 2260372 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2258861..2260372 Mycobacterium vanbaalenii PYR-1 4647293 YP_952939.1 CDS Mvan_2118 NC_008726.1 2260373 2261737 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_2995 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2260373..2261737 Mycobacterium vanbaalenii PYR-1 4647294 YP_952940.1 CDS Mvan_2119 NC_008726.1 2261793 2262884 R KEGG: mmc:Mmcs_1903 LppZ; LppZ complement(2261793..2262884) Mycobacterium vanbaalenii PYR-1 4647295 YP_952941.1 CDS Mvan_2120 NC_008726.1 2262992 2263882 D PFAM: DoxX family protein; KEGG: mmc:Mmcs_1904 DoxX; DoxX family protein 2262992..2263882 Mycobacterium vanbaalenii PYR-1 4647296 YP_952942.1 CDS Mvan_2121 NC_008726.1 2263890 2264231 R KEGG: mmc:Mmcs_1905 low molecular weight protein antigen 6 (CFP-6); low molecular weight protein antigen 6 complement(2263890..2264231) Mycobacterium vanbaalenii PYR-1 4647297 YP_952943.1 CDS Mvan_2122 NC_008726.1 2264589 2266466 D acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 1 catalytic subunit 2264589..2266466 Mycobacterium vanbaalenii PYR-1 4647298 YP_952944.1 CDS ilvH NC_008726.1 2266498 2266998 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2266498..2266998 Mycobacterium vanbaalenii PYR-1 4648792 YP_952945.1 CDS Mvan_2124 NC_008726.1 2267038 2268051 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2267038..2268051 Mycobacterium vanbaalenii PYR-1 4648793 YP_952946.1 CDS Mvan_2125 NC_008726.1 2268088 2268759 D KEGG: mmc:Mmcs_5226 putative conserved integral membrane alanine and leucine rich protein; hypothetical protein 2268088..2268759 Mycobacterium vanbaalenii PYR-1 4648794 YP_952947.1 CDS Mvan_2126 NC_008726.1 2268756 2269352 R PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: mpa:MAP3035 putative Trp repressor binding protein; flavodoxin/nitric oxide synthase complement(2268756..2269352) Mycobacterium vanbaalenii PYR-1 4648795 YP_952948.1 CDS Mvan_2127 NC_008726.1 2269385 2270833 R KEGG: mpa:MAP3034 hypothetical protein; hypothetical protein complement(2269385..2270833) Mycobacterium vanbaalenii PYR-1 4648796 YP_952949.1 CDS Mvan_2128 NC_008726.1 2270848 2272434 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2270848..2272434 Mycobacterium vanbaalenii PYR-1 4648797 YP_952950.1 CDS Mvan_2129 NC_008726.1 2272431 2273441 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2272431..2273441 Mycobacterium vanbaalenii PYR-1 4648798 YP_952951.1 CDS Mvan_2130 NC_008726.1 2273501 2274031 D KEGG: mmc:Mmcs_1912 hypothetical protein; hypothetical protein 2273501..2274031 Mycobacterium vanbaalenii PYR-1 4648799 YP_952952.1 CDS Mvan_2131 NC_008726.1 2274111 2275382 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1916 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(2274111..2275382) Mycobacterium vanbaalenii PYR-1 4648800 YP_952953.1 CDS Mvan_2132 NC_008726.1 2275440 2276228 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mmc:Mmcs_1918 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 2275440..2276228 Mycobacterium vanbaalenii PYR-1 4648801 YP_952954.1 CDS gltX NC_008726.1 2276225 2277712 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2276225..2277712 Mycobacterium vanbaalenii PYR-1 4648802 YP_952955.1 CDS Mvan_2134 NC_008726.1 2278160 2278861 R PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_1920 transcriptional regulator, IclR family; regulatory proteins IclR complement(2278160..2278861) Mycobacterium vanbaalenii PYR-1 4648805 YP_952956.1 CDS Mvan_2135 NC_008726.1 2278900 2280345 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2278900..2280345 Mycobacterium vanbaalenii PYR-1 4648806 YP_952957.1 CDS leuD NC_008726.1 2280365 2280958 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2280365..2280958 Mycobacterium vanbaalenii PYR-1 4648807 YP_952958.1 CDS Mvan_2137 NC_008726.1 2281160 2281798 D PFAM: histone family protein DNA-binding protein; KEGG: mpa:MAP3024c HupB; histone family protein DNA-binding protein 2281160..2281798 Mycobacterium vanbaalenii PYR-1 4648808 YP_952959.1 CDS Mvan_2138 NC_008726.1 2281888 2282820 R PFAM: NUDIX hydrolase; Phosphoglycerate mutase; KEGG: mmc:Mmcs_1924 NUDIX hydrolase; NUDIX hydrolase complement(2281888..2282820) Mycobacterium vanbaalenii PYR-1 4648809 YP_952960.1 CDS Mvan_2139 NC_008726.1 2282860 2285052 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(2282860..2285052) Mycobacterium vanbaalenii PYR-1 4648810 YP_952961.1 CDS Mvan_2140 NC_008726.1 2285116 2285757 R KEGG: mpa:MAP3021 hypothetical protein; hypothetical protein complement(2285116..2285757) Mycobacterium vanbaalenii PYR-1 4648811 YP_952962.1 CDS gpsA NC_008726.1 2285829 2286806 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2285829..2286806 Mycobacterium vanbaalenii PYR-1 4648812 YP_952963.1 CDS Mvan_2142 NC_008726.1 2286815 2287924 D catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine; cystathionine gamma-lyase 2286815..2287924 Mycobacterium vanbaalenii PYR-1 4648813 YP_952964.1 CDS ddl NC_008726.1 2287954 2289057 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2287954..2289057 Mycobacterium vanbaalenii PYR-1 4648814 YP_952965.1 CDS Mvan_2144 NC_008726.1 2289054 2290835 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein complement(2289054..2290835) Mycobacterium vanbaalenii PYR-1 4649121 YP_952966.1 CDS Mvan_2145 NC_008726.1 2290886 2291293 R KEGG: mmc:Mmcs_5579 Tn554 transposase C; Tn554 transposase C complement(2290886..2291293) Mycobacterium vanbaalenii PYR-1 4649122 YP_952967.1 CDS Mvan_2146 NC_008726.1 2291283 2293274 R PFAM: phage integrase family protein; KEGG: mmc:Mmcs_5578 phage integrase; phage integrase family protein complement(2291283..2293274) Mycobacterium vanbaalenii PYR-1 4649123 YP_952968.1 CDS Mvan_2147 NC_008726.1 2293274 2294377 R PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mmc:Mmcs_5577 phage integrase; phage integrase family protein complement(2293274..2294377) Mycobacterium vanbaalenii PYR-1 4649124 YP_952969.1 CDS Mvan_2148 NC_008726.1 2294583 2295413 D PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2984 hypothetical protein; alpha/beta hydrolase fold protein 2294583..2295413 Mycobacterium vanbaalenii PYR-1 4649125 YP_952970.1 CDS Mvan_2149 NC_008726.1 2295742 2296365 R KEGG: mmc:Mmcs_1930 putative conserved secreted protein; hypothetical protein complement(2295742..2296365) Mycobacterium vanbaalenii PYR-1 4649126 YP_952971.1 CDS Mvan_2150 NC_008726.1 2296375 2296617 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1931 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2296375..2296617) Mycobacterium vanbaalenii PYR-1 4649127 YP_952972.1 CDS Mvan_2151 NC_008726.1 2296718 2297680 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 2296718..2297680 Mycobacterium vanbaalenii PYR-1 4649128 YP_952973.1 CDS Mvan_2152 NC_008726.1 2297709 2298386 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 2297709..2298386 Mycobacterium vanbaalenii PYR-1 4649129 YP_952974.1 CDS rpmB NC_008726.1 2298409 2298603 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(2298409..2298603) Mycobacterium vanbaalenii PYR-1 4649130 YP_952975.1 CDS Mvan_2154 NC_008726.1 2298830 2300485 D PFAM: Dak phosphatase; KEGG: mmc:Mmcs_1935 Dak phosphatase; Dak phosphatase 2298830..2300485 Mycobacterium vanbaalenii PYR-1 4649131 YP_952976.1 CDS Mvan_2155 NC_008726.1 2300488 2302746 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2300488..2302746 Mycobacterium vanbaalenii PYR-1 4649132 YP_952977.1 CDS Mvan_2156 NC_008726.1 2302743 2303450 D KEGG: mmc:Mmcs_1937 hypothetical protein; hypothetical protein 2302743..2303450 Mycobacterium vanbaalenii PYR-1 4649133 YP_952978.1 CDS Mvan_2157 NC_008726.1 2304046 2305242 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mmc:Mmcs_1602 Dyp-type peroxidase; Dyp-type peroxidase family protein complement(2304046..2305242) Mycobacterium vanbaalenii PYR-1 4649134 YP_952979.1 CDS Mvan_2158 NC_008726.1 2305235 2305741 R PFAM: protein of unknown function DUF461; KEGG: mmc:Mmcs_1601 protein of unknown function DUF461; hypothetical protein complement(2305235..2305741) Mycobacterium vanbaalenii PYR-1 4649135 YP_952980.1 CDS Mvan_2159 NC_008726.1 2305734 2307158 R PFAM: Propeptide, PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: mmc:Mmcs_1600 PepSY-associated TM helix; peptidase complement(2305734..2307158) Mycobacterium vanbaalenii PYR-1 4649136 YP_952981.1 CDS Mvan_2160 NC_008726.1 2307290 2307823 R KEGG: mmc:Mmcs_1599 hypothetical protein; hypothetical protein complement(2307290..2307823) Mycobacterium vanbaalenii PYR-1 4649137 YP_952982.1 CDS Mvan_2161 NC_008726.1 2307885 2308724 R PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_1938 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase complement(2307885..2308724) Mycobacterium vanbaalenii PYR-1 4649138 YP_952983.1 CDS Mvan_2162 NC_008726.1 2308816 2309931 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_1940 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein 2308816..2309931 Mycobacterium vanbaalenii PYR-1 4649139 YP_952984.1 CDS Mvan_2163 NC_008726.1 2309964 2310737 D KEGG: mmc:Mmcs_1941 hypothetical protein; hypothetical protein 2309964..2310737 Mycobacterium vanbaalenii PYR-1 4649140 YP_952985.1 CDS Mvan_2164 NC_008726.1 2310734 2311369 D PFAM: Vitamin K epoxide reductase; KEGG: mmc:Mmcs_1942 vitamin K epoxide reductase; vitamin K epoxide reductase 2310734..2311369 Mycobacterium vanbaalenii PYR-1 4649141 YP_952986.1 CDS Mvan_2165 NC_008726.1 2311473 2314910 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 2311473..2314910 Mycobacterium vanbaalenii PYR-1 4649142 YP_952987.1 CDS Mvan_2166 NC_008726.1 2314952 2315476 D TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: mmc:Mmcs_1944 conserved hypothetical protein 95; putative methyltransferase 2314952..2315476 Mycobacterium vanbaalenii PYR-1 4649143 YP_952988.1 CDS coaD NC_008726.1 2315561 2316043 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2315561..2316043 Mycobacterium vanbaalenii PYR-1 4649144 YP_952989.1 CDS Mvan_2168 NC_008726.1 2316128 2316694 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_1946 hemerythrin HHE cation binding region; hemerythrin HHE cation binding domain-containing protein 2316128..2316694 Mycobacterium vanbaalenii PYR-1 4649145 YP_952990.1 CDS Mvan_2169 NC_008726.1 2316817 2317554 D KEGG: mmc:Mmcs_1947 hypothetical protein; hypothetical protein 2316817..2317554 Mycobacterium vanbaalenii PYR-1 4645544 YP_952991.1 CDS Mvan_2170 NC_008726.1 2317585 2318178 D PFAM: protein of unknown function DUF177; KEGG: mmc:Mmcs_1948 protein of unknown function DUF177; hypothetical protein 2317585..2318178 Mycobacterium vanbaalenii PYR-1 4645545 YP_952992.1 CDS rnc NC_008726.1 2318175 2318882 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2318175..2318882 Mycobacterium vanbaalenii PYR-1 4645546 YP_952993.1 CDS Mvan_2172 NC_008726.1 2318889 2319770 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2318889..2319770 Mycobacterium vanbaalenii PYR-1 4645547 YP_952994.1 CDS Mvan_2173 NC_008726.1 2319799 2320224 D PFAM: OsmC family protein; KEGG: mmc:Mmcs_1951 OsmC-like protein; OsmC family protein 2319799..2320224 Mycobacterium vanbaalenii PYR-1 4645548 YP_952995.1 CDS Mvan_2174 NC_008726.1 2320211 2320492 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 2320211..2320492 Mycobacterium vanbaalenii PYR-1 4645549 YP_952996.1 CDS Mvan_2175 NC_008726.1 2320519 2324103 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: mmc:Mmcs_1953 chromosome segregation protein SMC; chromosome segregation protein SMC 2320519..2324103 Mycobacterium vanbaalenii PYR-1 4645550 YP_952997.1 CDS Mvan_2176 NC_008726.1 2324112 2325140 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(2324112..2325140) Mycobacterium vanbaalenii PYR-1 4645551 YP_952998.1 CDS Mvan_2177 NC_008726.1 2325169 2326518 D KEGG: mmc:Mmcs_1955 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 2325169..2326518 Mycobacterium vanbaalenii PYR-1 4645552 YP_952999.1 CDS Mvan_2178 NC_008726.1 2326741 2328093 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mmc:Mmcs_1956 ammonium transporter; ammonium transporter 2326741..2328093 Mycobacterium vanbaalenii PYR-1 4645553 YP_953000.1 CDS Mvan_2179 NC_008726.1 2328127 2328465 D PFAM: nitrogen regulatory protein P-II; KEGG: mmc:Mmcs_1957 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2328127..2328465 Mycobacterium vanbaalenii PYR-1 4645554 YP_953001.1 CDS Mvan_2180 NC_008726.1 2328547 2331015 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK; PII uridylyl-transferase 2328547..2331015 Mycobacterium vanbaalenii PYR-1 4645555 YP_953002.1 CDS Mvan_2181 NC_008726.1 2331067 2332635 D KEGG: mmc:Mmcs_1959 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein 2331067..2332635 Mycobacterium vanbaalenii PYR-1 4645556 YP_953003.1 CDS Mvan_2182 NC_008726.1 2332632 2333714 D PFAM: amidohydrolase; KEGG: mpa:MAP2982c hypothetical protein; amidohydrolase 2332632..2333714 Mycobacterium vanbaalenii PYR-1 4645557 YP_953004.1 CDS Mvan_2183 NC_008726.1 2333875 2334711 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1961 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 complement(2333875..2334711) Mycobacterium vanbaalenii PYR-1 4645558 YP_953005.1 CDS Mvan_2184 NC_008726.1 2334795 2335679 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1962 serine-type D-Ala-D-Ala carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase complement(2334795..2335679) Mycobacterium vanbaalenii PYR-1 4645559 YP_953006.1 CDS Mvan_2185 NC_008726.1 2335685 2336143 D KEGG: mmc:Mmcs_1963 hypothetical protein; hypothetical protein 2335685..2336143 Mycobacterium vanbaalenii PYR-1 4645560 YP_953007.1 CDS Mvan_2186 NC_008726.1 2336149 2336640 R KEGG: mpa:MAP1750 hypothetical protein; hypothetical protein complement(2336149..2336640) Mycobacterium vanbaalenii PYR-1 4645561 YP_953008.1 CDS rpsP NC_008726.1 2336873 2337349 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2336873..2337349 Mycobacterium vanbaalenii PYR-1 4645562 YP_953009.1 CDS Mvan_2188 NC_008726.1 2337346 2337588 D KEGG: mmc:Mmcs_1966 hypothetical protein; hypothetical protein 2337346..2337588 Mycobacterium vanbaalenii PYR-1 4645563 YP_953010.1 CDS rimM NC_008726.1 2337601 2338119 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 2337601..2338119 Mycobacterium vanbaalenii PYR-1 4645564 YP_953011.1 CDS trmD NC_008726.1 2338132 2338818 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2338132..2338818 Mycobacterium vanbaalenii PYR-1 4645565 YP_953012.1 CDS Mvan_2191 NC_008726.1 2338815 2339753 R KEGG: mmc:Mmcs_1969 putative conserved alanine rich lipoprotein LppW; putative alanine rich lipoprotein LppW complement(2338815..2339753) Mycobacterium vanbaalenii PYR-1 4645566 YP_953013.1 CDS rplS NC_008726.1 2340060 2340401 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2340060..2340401 Mycobacterium vanbaalenii PYR-1 4645567 YP_953014.1 CDS Mvan_2193 NC_008726.1 2340450 2341310 D KEGG: mmc:Mmcs_1971 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 2340450..2341310 Mycobacterium vanbaalenii PYR-1 4645568 YP_953015.1 CDS rnhB NC_008726.1 2341327 2342076 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2341327..2342076 Mycobacterium vanbaalenii PYR-1 4645569 YP_953016.1 CDS Mvan_2195 NC_008726.1 2342073 2342378 D KEGG: mmc:Mmcs_1973 hypothetical protein; hypothetical protein 2342073..2342378 Mycobacterium vanbaalenii PYR-1 4646297 YP_953017.1 CDS Mvan_2196 NC_008726.1 2342411 2343226 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_1975 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase 2342411..2343226 Mycobacterium vanbaalenii PYR-1 4646298 YP_953018.1 CDS Mvan_2197 NC_008726.1 2343251 2344459 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1977 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2343251..2344459 Mycobacterium vanbaalenii PYR-1 4646299 YP_953019.1 CDS Mvan_2198 NC_008726.1 2344456 2345277 D PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_1978 acyl-CoA thioesterase; acyl-CoA thioesterase 2344456..2345277 Mycobacterium vanbaalenii PYR-1 4646300 YP_953020.1 CDS Mvan_2199 NC_008726.1 2345146 2347734 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1979 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2345146..2347734) Mycobacterium vanbaalenii PYR-1 4646301 YP_953021.1 CDS Mvan_2200 NC_008726.1 2347775 2348617 R PFAM: protein of unknown function DUF1206; KEGG: mmc:Mmcs_1983 protein of unknown function DUF1206; hypothetical protein complement(2347775..2348617) Mycobacterium vanbaalenii PYR-1 4646302 YP_953022.1 CDS Mvan_2202 NC_008726.1 2349381 2349746 D PFAM: protein of unknown function UPF0102; KEGG: mmc:Mmcs_1985 protein of unknown function UPF0102; hypothetical protein 2349381..2349746 Mycobacterium vanbaalenii PYR-1 4646304 YP_953023.1 CDS Mvan_2203 NC_008726.1 2349746 2351257 D KEGG: mpa:MAP2962c magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 2349746..2351257 Mycobacterium vanbaalenii PYR-1 4646305 YP_953024.1 CDS Mvan_2204 NC_008726.1 2351257 2352396 D TIGRFAM: DNA protecting protein DprA; PFAM: transcriptional regulator TrmB; SMF family protein; KEGG: mpa:MAP2961c DNA processing chain A; transcriptional regulator TrmB 2351257..2352396 Mycobacterium vanbaalenii PYR-1 4646306 YP_953025.1 CDS Mvan_2205 NC_008726.1 2352584 2353429 D PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: mmc:Mmcs_1988 FAD-binding 9, siderophore-interacting; siderophore-interacting protein 2352584..2353429 Mycobacterium vanbaalenii PYR-1 4646307 YP_953026.1 CDS Mvan_2206 NC_008726.1 2353466 2354626 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mmc:Mmcs_1989 FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 2353466..2354626 Mycobacterium vanbaalenii PYR-1 4646308 YP_953027.1 CDS xerC NC_008726.1 2354638 2355597 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2354638..2355597 Mycobacterium vanbaalenii PYR-1 4646309 YP_953028.1 CDS Mvan_2208 NC_008726.1 2355701 2356189 R PFAM: peptidase M23B; KEGG: mmc:Mmcs_1992 peptidase M23B; peptidase M23B complement(2355701..2356189) Mycobacterium vanbaalenii PYR-1 4646310 YP_953029.1 CDS rpsB NC_008726.1 2356486 2357307 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2356486..2357307 Mycobacterium vanbaalenii PYR-1 4646311 YP_953030.1 CDS tsf NC_008726.1 2357338 2358153 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2357338..2358153 Mycobacterium vanbaalenii PYR-1 4646312 YP_953031.1 CDS Mvan_2211 NC_008726.1 2358559 2360067 D PFAM: sugar transferase; KEGG: mmc:Mmcs_3584 undecaprenyl-phosphate galactosephosphotransferase; sugar transferase 2358559..2360067 Mycobacterium vanbaalenii PYR-1 4646313 YP_953032.1 CDS Mvan_2212 NC_008726.1 2360643 2362007 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: rha:RHA1_ro08026 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 2360643..2362007 Mycobacterium vanbaalenii PYR-1 4646314 YP_953033.1 CDS Mvan_2213 NC_008726.1 2362118 2363524 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2362118..2363524 Mycobacterium vanbaalenii PYR-1 4646315 YP_953034.1 CDS Mvan_2214 NC_008726.1 2363644 2364819 D PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1996 protein of unknown function DUF214; hypothetical protein 2363644..2364819 Mycobacterium vanbaalenii PYR-1 4646316 YP_953035.1 CDS Mvan_2215 NC_008726.1 2364820 2365389 D PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1997 protein of unknown function DUF214; hypothetical protein 2364820..2365389 Mycobacterium vanbaalenii PYR-1 4646317 YP_953036.1 CDS Mvan_2216 NC_008726.1 2365392 2366093 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_1998 ABC transporter related; ABC transporter--like protein 2365392..2366093 Mycobacterium vanbaalenii PYR-1 4646318 YP_953037.1 CDS Mvan_2217 NC_008726.1 2366119 2367630 D PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_1999 amino acid permease-associated region; amino acid permease-associated protein 2366119..2367630 Mycobacterium vanbaalenii PYR-1 4646319 YP_953038.1 CDS tynA NC_008726.1 2367627 2369606 D catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; tyramine oxidase 2367627..2369606 Mycobacterium vanbaalenii PYR-1 4646320 YP_953039.1 CDS Mvan_2219 NC_008726.1 2369704 2370147 R TIGRFAM: alkylhydroperoxidase-like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: nmu:Nmul_A0996 alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(2369704..2370147) Mycobacterium vanbaalenii PYR-1 4646321 YP_953040.1 CDS pyrH NC_008726.1 2370377 2371132 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2370377..2371132 Mycobacterium vanbaalenii PYR-1 4644942 YP_953041.1 CDS frr NC_008726.1 2371168 2371725 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2371168..2371725 Mycobacterium vanbaalenii PYR-1 4644943 YP_953042.1 CDS Mvan_2222 NC_008726.1 2371728 2372606 D PFAM: phosphatidate cytidylyltransferase; KEGG: mmc:Mmcs_2005 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2371728..2372606 Mycobacterium vanbaalenii PYR-1 4644944 YP_953043.1 CDS Mvan_2223 NC_008726.1 2372653 2373750 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 2372653..2373750 Mycobacterium vanbaalenii PYR-1 4644945 YP_953044.1 CDS Mvan_2224 NC_008726.1 2373747 2376743 R KEGG: mmc:Mmcs_0859 hypothetical protein; hypothetical protein complement(2373747..2376743) Mycobacterium vanbaalenii PYR-1 4644946 YP_953045.1 CDS Mvan_2225 NC_008726.1 2377265 2377693 R KEGG: mmc:Mmcs_2007 hypothetical protein; hypothetical protein complement(2377265..2377693) Mycobacterium vanbaalenii PYR-1 4644947 YP_953046.1 CDS Mvan_2226 NC_008726.1 2377867 2379354 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2008 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2377867..2379354) Mycobacterium vanbaalenii PYR-1 4644948 YP_953047.1 CDS Mvan_2227 NC_008726.1 2379401 2379943 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2010 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2379401..2379943) Mycobacterium vanbaalenii PYR-1 4644949 YP_953048.1 CDS Mvan_2228 NC_008726.1 2380025 2381167 R KEGG: mmc:Mmcs_2011 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2380025..2381167) Mycobacterium vanbaalenii PYR-1 4644950 YP_953049.1 CDS Mvan_2229 NC_008726.1 2381248 2382438 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_2012 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2381248..2382438 Mycobacterium vanbaalenii PYR-1 4644951 YP_953050.1 CDS Mvan_2230 NC_008726.1 2382414 2383673 R KEGG: mpa:MAP3549 hypothetical protein; hypothetical protein complement(2382414..2383673) Mycobacterium vanbaalenii PYR-1 4644952 YP_953051.1 CDS Mvan_2231 NC_008726.1 2383749 2384903 D KEGG: mpa:MAP3547c hypothetical protein; hypothetical protein 2383749..2384903 Mycobacterium vanbaalenii PYR-1 4644953 YP_953052.1 CDS Mvan_2232 NC_008726.1 2384896 2385510 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4573 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2384896..2385510) Mycobacterium vanbaalenii PYR-1 4644954 YP_953053.1 CDS Mvan_2233 NC_008726.1 2385521 2386084 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2013 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2385521..2386084) Mycobacterium vanbaalenii PYR-1 4644955 YP_953054.1 CDS Mvan_2234 NC_008726.1 2386129 2387382 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_2014 cytochrome P450; cytochrome P450 2386129..2387382 Mycobacterium vanbaalenii PYR-1 4644956 YP_953055.1 CDS Mvan_2235 NC_008726.1 2387399 2387593 D KEGG: mmc:Mmcs_2015 putative ferredoxin; putative ferredoxin 2387399..2387593 Mycobacterium vanbaalenii PYR-1 4644957 YP_953056.1 CDS Mvan_2236 NC_008726.1 2387639 2388469 R KEGG: mmc:Mmcs_2017 hypothetical protein; hypothetical protein complement(2387639..2388469) Mycobacterium vanbaalenii PYR-1 4644958 YP_953057.1 CDS Mvan_2237 NC_008726.1 2388488 2389309 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mpa:MAP3581c hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(2388488..2389309) Mycobacterium vanbaalenii PYR-1 4644959 YP_953058.1 CDS Mvan_2238 NC_008726.1 2389337 2390089 D KEGG: mmc:Mmcs_2019 hypothetical protein; hypothetical protein 2389337..2390089 Mycobacterium vanbaalenii PYR-1 4644960 YP_953059.1 CDS Mvan_2239 NC_008726.1 2390098 2391345 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_2020 cytochrome P450; cytochrome P450 2390098..2391345 Mycobacterium vanbaalenii PYR-1 4644961 YP_953060.1 CDS Mvan_2240 NC_008726.1 2391347 2392315 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2021 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 2391347..2392315 Mycobacterium vanbaalenii PYR-1 4644962 YP_953061.1 CDS Mvan_2241 NC_008726.1 2392317 2393096 D PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_2022 HpcH/HpaI aldolase; HpcH/HpaI aldolase 2392317..2393096 Mycobacterium vanbaalenii PYR-1 4644963 YP_953062.1 CDS Mvan_2242 NC_008726.1 2393096 2393827 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2023 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2393096..2393827 Mycobacterium vanbaalenii PYR-1 4644964 YP_953063.1 CDS Mvan_2243 NC_008726.1 2393824 2395347 D KEGG: mmc:Mmcs_2024 cyclohexanone monooxygenase; cyclohexanone monooxygenase 2393824..2395347 Mycobacterium vanbaalenii PYR-1 4644965 YP_953064.1 CDS Mvan_2244 NC_008726.1 2395344 2396279 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_2028 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein 2395344..2396279 Mycobacterium vanbaalenii PYR-1 4644966 YP_953065.1 CDS Mvan_2245 NC_008726.1 2396256 2396738 R KEGG: mmc:Mmcs_2029 hypothetical protein; hypothetical protein complement(2396256..2396738) Mycobacterium vanbaalenii PYR-1 4649348 YP_953066.1 CDS Mvan_2246 NC_008726.1 2396816 2398000 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_2030 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 2396816..2398000 Mycobacterium vanbaalenii PYR-1 4649349 YP_953067.1 CDS Mvan_2247 NC_008726.1 2398475 2399407 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_2031 luciferase-like protein; luciferase family protein complement(2398475..2399407) Mycobacterium vanbaalenii PYR-1 4649350 YP_953068.1 CDS Mvan_2248 NC_008726.1 2399515 2400435 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_2032 luciferase-like protein; luciferase family protein 2399515..2400435 Mycobacterium vanbaalenii PYR-1 4649351 YP_953069.1 CDS Mvan_2249 NC_008726.1 2400443 2401462 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP3803 hypothetical protein; alcohol dehydrogenase complement(2400443..2401462) Mycobacterium vanbaalenii PYR-1 4649352 YP_953070.1 CDS Mvan_2250 NC_008726.1 2401509 2402303 R PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_4850 acyl-CoA thioesterase; acyl-CoA thioesterase complement(2401509..2402303) Mycobacterium vanbaalenii PYR-1 4649353 YP_953071.1 CDS Mvan_2251 NC_008726.1 2402316 2402816 R KEGG: mbo:Mb2604 hypothetical protein; hypothetical protein complement(2402316..2402816) Mycobacterium vanbaalenii PYR-1 4649354 YP_953072.1 CDS Mvan_2252 NC_008726.1 2402850 2403527 R PFAM: protein of unknown function DUF427; KEGG: mpa:MAP3586c hypothetical protein; hypothetical protein complement(2402850..2403527) Mycobacterium vanbaalenii PYR-1 4649355 YP_953073.1 CDS Mvan_2253 NC_008726.1 2403782 2405212 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_2034 protein of unknown function UPF0089; hypothetical protein 2403782..2405212 Mycobacterium vanbaalenii PYR-1 4649356 YP_953074.1 CDS Mvan_2254 NC_008726.1 2405375 2405947 D KEGG: mpa:MAP0726 hypothetical protein; hypothetical protein 2405375..2405947 Mycobacterium vanbaalenii PYR-1 4649357 YP_953075.1 CDS Mvan_2255 NC_008726.1 2405982 2406236 R KEGG: mmc:Mmcs_2037 putative conserved transmembrane protein; putative transmembrane protein complement(2405982..2406236) Mycobacterium vanbaalenii PYR-1 4649358 YP_953076.1 CDS Mvan_2256 NC_008726.1 2406350 2407186 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2861 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2406350..2407186 Mycobacterium vanbaalenii PYR-1 4649359 YP_953077.1 CDS Mvan_2257 NC_008726.1 2407203 2408531 R PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: mmc:Mmcs_2038 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase complement(2407203..2408531) Mycobacterium vanbaalenii PYR-1 4649360 YP_953078.1 CDS Mvan_2258 NC_008726.1 2408672 2409256 R PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_2040 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(2408672..2409256) Mycobacterium vanbaalenii PYR-1 4649361 YP_953079.1 CDS Mvan_2259 NC_008726.1 2409283 2409966 R PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_2041 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(2409283..2409966) Mycobacterium vanbaalenii PYR-1 4649362 YP_953080.1 CDS Mvan_2260 NC_008726.1 2410125 2411297 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2410125..2411297 Mycobacterium vanbaalenii PYR-1 4649363 YP_953081.1 CDS Mvan_2261 NC_008726.1 2411323 2412561 D PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: mmc:Mmcs_2043 peptidase M50; peptidase M50 2411323..2412561 Mycobacterium vanbaalenii PYR-1 4649364 YP_953082.1 CDS ispG NC_008726.1 2412573 2413751 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2412573..2413751 Mycobacterium vanbaalenii PYR-1 4649365 YP_953083.1 CDS Mvan_2263 NC_008726.1 2413809 2414672 D PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: mmc:Mmcs_2045 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2413809..2414672 Mycobacterium vanbaalenii PYR-1 4649366 YP_953084.1 CDS Mvan_2264 NC_008726.1 2414699 2415421 D KEGG: mmc:Mmcs_2046 hypothetical protein; hypothetical protein 2414699..2415421 Mycobacterium vanbaalenii PYR-1 4649367 YP_953085.1 CDS Mvan_2265 NC_008726.1 2415708 2416970 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_0130 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 2415708..2416970 Mycobacterium vanbaalenii PYR-1 4649368 YP_953086.1 CDS Mvan_2266 NC_008726.1 2417206 2418972 D PFAM: penicillin-binding protein, transpeptidase; NTF2 domain protein N-terminal transpeptidase; KEGG: mmc:Mmcs_2047 penicillin-binding protein, transpeptidase; penicillin-binding transpeptidase 2417206..2418972 Mycobacterium vanbaalenii PYR-1 4649369 YP_953087.1 CDS Mvan_2267 NC_008726.1 2419001 2419636 D PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_2048 protein of unknown function DUF1707; hypothetical protein 2419001..2419636 Mycobacterium vanbaalenii PYR-1 4649370 YP_953088.1 CDS Mvan_2268 NC_008726.1 2419629 2420801 R KEGG: mpa:MAP4306 hypothetical protein; hypothetical protein complement(2419629..2420801) Mycobacterium vanbaalenii PYR-1 4649371 YP_953089.1 CDS Mvan_2269 NC_008726.1 2420798 2421865 R KEGG: mpa:MAP4305 hypothetical protein; hypothetical protein complement(2420798..2421865) Mycobacterium vanbaalenii PYR-1 4649372 YP_953090.1 CDS Mvan_2270 NC_008726.1 2421905 2422507 D PFAM: regulatory protein, TetR; KEGG: fra:Francci3_0716 transcriptional regulator, TetR family; TetR family transcriptional regulator 2421905..2422507 Mycobacterium vanbaalenii PYR-1 4644456 YP_953091.1 CDS Mvan_2271 NC_008726.1 2422504 2422890 R TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2049 phenylacetic acid degradation-related protein; hypothetical protein complement(2422504..2422890) Mycobacterium vanbaalenii PYR-1 4644457 YP_953092.1 CDS Mvan_2272 NC_008726.1 2422913 2423770 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 2422913..2423770 Mycobacterium vanbaalenii PYR-1 4644458 YP_953093.1 CDS Mvan_2273 NC_008726.1 2423792 2424448 D KEGG: mmc:Mmcs_2052 hypothetical protein; hypothetical protein 2423792..2424448 Mycobacterium vanbaalenii PYR-1 4644459 YP_953094.1 CDS Mvan_2274 NC_008726.1 2424523 2425086 D KEGG: mmc:Mmcs_2053 hypothetical protein; hypothetical protein 2424523..2425086 Mycobacterium vanbaalenii PYR-1 4644460 YP_953095.1 CDS Mvan_2275 NC_008726.1 2425092 2426873 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_2054 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2425092..2426873) Mycobacterium vanbaalenii PYR-1 4644461 YP_953096.1 CDS Mvan_2276 NC_008726.1 2426870 2428675 R KEGG: mmc:Mmcs_2055 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase complement(2426870..2428675) Mycobacterium vanbaalenii PYR-1 4644462 YP_953097.1 CDS Mvan_2277 NC_008726.1 2428845 2430413 R PFAM: amino acid permease-associated region; KEGG: sco:SCO4097 amino acid/metabolite permease; amino acid permease-associated protein complement(2428845..2430413) Mycobacterium vanbaalenii PYR-1 4644463 YP_953098.1 CDS Mvan_2278 NC_008726.1 2430605 2431984 D PFAM: glutamine synthetase, catalytic region; KEGG: mmc:Mmcs_2057 glutamate--ammonia ligase; glutamate--ammonia ligase 2430605..2431984 Mycobacterium vanbaalenii PYR-1 4644464 YP_953099.1 CDS Mvan_2279 NC_008726.1 2431971 2432813 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mmc:Mmcs_2058 peptidase C26; peptidase C26 2431971..2432813 Mycobacterium vanbaalenii PYR-1 4644465 YP_953100.1 CDS Mvan_2280 NC_008726.1 2432813 2434189 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2059 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 2432813..2434189 Mycobacterium vanbaalenii PYR-1 4644466 YP_953101.1 CDS Mvan_2281 NC_008726.1 2434189 2434962 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2060 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2434189..2434962 Mycobacterium vanbaalenii PYR-1 4644467 YP_953102.1 CDS Mvan_2282 NC_008726.1 2434971 2435819 D PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_2061 GntR-like protein; regulatory protein GntR 2434971..2435819 Mycobacterium vanbaalenii PYR-1 4644468 YP_953103.1 CDS Mvan_2283 NC_008726.1 2435888 2436277 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2062 transcriptional regulator, ArsR family; regulatory protein ArsR 2435888..2436277 Mycobacterium vanbaalenii PYR-1 4644469 YP_953104.1 CDS Mvan_2284 NC_008726.1 2436327 2439185 D PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: nfa:nfa34460 putative transcriptional regulator; transcriptional regulator 2436327..2439185 Mycobacterium vanbaalenii PYR-1 4644470 YP_953105.1 CDS Mvan_2285 NC_008726.1 2439261 2439620 R hypothetical protein complement(2439261..2439620) Mycobacterium vanbaalenii PYR-1 4644471 YP_953106.1 CDS Mvan_2286 NC_008726.1 2440958 2441488 D KEGG: mbo:Mb1275c PE-PGRS family protein; PE-PGRS family protein 2440958..2441488 Mycobacterium vanbaalenii PYR-1 4644472 YP_953107.1 CDS Mvan_2287 NC_008726.1 2441534 2442382 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1804 methyltransferase type 11; type 11 methyltransferase 2441534..2442382 Mycobacterium vanbaalenii PYR-1 4644473 YP_953108.1 CDS Mvan_2288 NC_008726.1 2442408 2443199 D PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; Helix-turn-helix, type 11 domain protein; KEGG: dra:DRA0211 transcriptional regulator, GntR family; UbiC transcription regulator-associated domain-containing protein 2442408..2443199 Mycobacterium vanbaalenii PYR-1 4644474 YP_953109.1 CDS Mvan_2289 NC_008726.1 2443237 2444160 D PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mlo:mll5367 hypothetical protein; aminoglycoside phosphotransferase 2443237..2444160 Mycobacterium vanbaalenii PYR-1 4644475 YP_953110.1 CDS Mvan_2290 NC_008726.1 2444176 2446647 D PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; FAD dependent oxidoreductase 2444176..2446647 Mycobacterium vanbaalenii PYR-1 4644476 YP_953111.1 CDS Mvan_2291 NC_008726.1 2446702 2447409 D PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mmc:Mmcs_2063 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 2446702..2447409 Mycobacterium vanbaalenii PYR-1 4644477 YP_953112.1 CDS Mvan_2292 NC_008726.1 2447406 2447774 D KEGG: mmc:Mmcs_2064 hypothetical protein; hypothetical protein 2447406..2447774 Mycobacterium vanbaalenii PYR-1 4644478 YP_953113.1 CDS Mvan_2293 NC_008726.1 2447776 2448555 D TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mmc:Mmcs_2065 cobalt ABC transporter CbiQ, permease subunit; cobalt ABC transporter inner membrane subunit CbiQ 2447776..2448555 Mycobacterium vanbaalenii PYR-1 4644479 YP_953114.1 CDS Mvan_2294 NC_008726.1 2448552 2449292 D KEGG: mmc:Mmcs_2066 ABC transporter related; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 2448552..2449292 Mycobacterium vanbaalenii PYR-1 4644480 YP_953115.1 CDS Mvan_2295 NC_008726.1 2449284 2450792 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mpa:MAP1001c sensory histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2449284..2450792) Mycobacterium vanbaalenii PYR-1 4644330 YP_953116.1 CDS Mvan_2296 NC_008726.1 2450792 2451559 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mbo:Mb1062c two component transcriptional regulator TrcR; two component transcriptional regulator complement(2450792..2451559) Mycobacterium vanbaalenii PYR-1 4644331 YP_953117.1 CDS Mvan_2297 NC_008726.1 2451705 2452352 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1379 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 2451705..2452352 Mycobacterium vanbaalenii PYR-1 4644332 YP_953118.1 CDS Mvan_2298 NC_008726.1 2452360 2453769 R catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide; mycothione reductase complement(2452360..2453769) Mycobacterium vanbaalenii PYR-1 4644333 YP_953119.1 CDS Mvan_2299 NC_008726.1 2453762 2454784 R KEGG: mmc:Mmcs_2068 hypothetical protein; hypothetical protein complement(2453762..2454784) Mycobacterium vanbaalenii PYR-1 4644334 YP_953120.1 CDS Mvan_2300 NC_008726.1 2454925 2456481 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2454925..2456481 Mycobacterium vanbaalenii PYR-1 4644335 YP_953121.1 CDS Mvan_2301 NC_008726.1 2456496 2456942 D KEGG: mmc:Mmcs_2070 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2456496..2456942 Mycobacterium vanbaalenii PYR-1 4644336 YP_953122.1 CDS Mvan_2302 NC_008726.1 2456939 2458855 D KEGG: mmc:Mmcs_2071 ATPase associated with various cellular activities, AAA_5; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; magnesium chelatase 2456939..2458855 Mycobacterium vanbaalenii PYR-1 4644337 YP_953123.1 CDS Mvan_2303 NC_008726.1 2458868 2459482 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2458868..2459482 Mycobacterium vanbaalenii PYR-1 4644338 YP_953124.1 CDS Mvan_2304 NC_008726.1 2459733 2461115 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2459733..2461115 Mycobacterium vanbaalenii PYR-1 4644339 YP_953125.1 CDS Mvan_2305 NC_008726.1 2461139 2462347 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmc:Mmcs_2074 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2461139..2462347 Mycobacterium vanbaalenii PYR-1 4644340 YP_953126.1 CDS Mvan_2306 NC_008726.1 2462381 2464012 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2075 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2462381..2464012 Mycobacterium vanbaalenii PYR-1 4644341 YP_953127.1 CDS Mvan_2307 NC_008726.1 2464088 2465614 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2075 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2464088..2465614 Mycobacterium vanbaalenii PYR-1 4644342 YP_953128.1 CDS Mvan_2308 NC_008726.1 2465638 2467395 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2465638..2467395 Mycobacterium vanbaalenii PYR-1 4644343 YP_953129.1 CDS Mvan_2309 NC_008726.1 2467403 2467873 R KEGG: mmc:Mmcs_2077 conserved hypothetical alanine rich protein; hypothetical protein complement(2467403..2467873) Mycobacterium vanbaalenii PYR-1 4644344 YP_953130.1 CDS Mvan_2310 NC_008726.1 2467870 2468397 R KEGG: mmc:Mmcs_2078 hypothetical protein; hypothetical protein complement(2467870..2468397) Mycobacterium vanbaalenii PYR-1 4644345 YP_953131.1 CDS Mvan_2311 NC_008726.1 2468556 2469086 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2468556..2469086 Mycobacterium vanbaalenii PYR-1 4644346 YP_953132.1 CDS nusA NC_008726.1 2469095 2470096 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2469095..2470096 Mycobacterium vanbaalenii PYR-1 4644347 YP_953133.1 CDS Mvan_2313 NC_008726.1 2470165 2470527 D PFAM: protein of unknown function DUF448; KEGG: mmc:Mmcs_2081 protein of unknown function DUF448; hypothetical protein 2470165..2470527 Mycobacterium vanbaalenii PYR-1 4644348 YP_953134.1 CDS infB NC_008726.1 2470630 2473422 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2470630..2473422 Mycobacterium vanbaalenii PYR-1 4644349 YP_953135.1 CDS rbfA NC_008726.1 2473457 2473948 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2473457..2473948 Mycobacterium vanbaalenii PYR-1 4644350 YP_953136.1 CDS Mvan_2316 NC_008726.1 2473923 2474930 D PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: mmc:Mmcs_2084 phosphoesterase, RecJ-like protein; phosphoesterase domain-containing protein 2473923..2474930 Mycobacterium vanbaalenii PYR-1 4644351 YP_953137.1 CDS Mvan_2317 NC_008726.1 2474923 2476251 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mmc:Mmcs_2085 MATE efflux family protein; MATE efflux family protein 2474923..2476251 Mycobacterium vanbaalenii PYR-1 4644352 YP_953138.1 CDS Mvan_2318 NC_008726.1 2476255 2476818 R PFAM: Methyltransferase type 11; Methyltransferase type 12; SMART: ribosomal RNA adenine methylase transferase; KEGG: mtc:MT3940 hypothetical protein; type 11 methyltransferase complement(2476255..2476818) Mycobacterium vanbaalenii PYR-1 4644353 YP_953139.1 CDS Mvan_2319 NC_008726.1 2476829 2477365 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_2086 methyltransferase type 11; type 11 methyltransferase complement(2476829..2477365) Mycobacterium vanbaalenii PYR-1 4644354 YP_953140.1 CDS Mvan_2320 NC_008726.1 2477549 2478361 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2477549..2478361) Mycobacterium vanbaalenii PYR-1 4646097 YP_953141.1 CDS Mvan_2321 NC_008726.1 2478623 2479195 D KEGG: mtc:MT2895.1 hypothetical protein; hypothetical protein 2478623..2479195 Mycobacterium vanbaalenii PYR-1 4646098 YP_953142.1 CDS Mvan_2322 NC_008726.1 2479184 2480821 R PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: mmc:Mmcs_2091 peptidase S15; peptidase S15 complement(2479184..2480821) Mycobacterium vanbaalenii PYR-1 4646099 YP_953143.1 CDS Mvan_2323 NC_008726.1 2480832 2481452 R PFAM: regulatory protein, TetR; KEGG: ret:RHE_PE00380 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator complement(2480832..2481452) Mycobacterium vanbaalenii PYR-1 4646100 YP_953144.1 CDS Mvan_2324 NC_008726.1 2481497 2482648 D KEGG: mpa:MAP1378 hypothetical protein; hypothetical protein 2481497..2482648 Mycobacterium vanbaalenii PYR-1 4646101 YP_953145.1 CDS Mvan_2325 NC_008726.1 2482659 2483717 D KEGG: mpa:MAP1379 hypothetical protein; hypothetical protein 2482659..2483717 Mycobacterium vanbaalenii PYR-1 4646102 YP_953146.1 CDS Mvan_2326 NC_008726.1 2483730 2484314 R KEGG: mmc:Mmcs_2092 hypothetical protein; hypothetical protein complement(2483730..2484314) Mycobacterium vanbaalenii PYR-1 4646103 YP_953147.1 CDS Mvan_2327 NC_008726.1 2484479 2485426 D PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_2093 metallophosphoesterase; metallophosphoesterase 2484479..2485426 Mycobacterium vanbaalenii PYR-1 4646104 YP_953148.1 CDS Mvan_2328 NC_008726.1 2485423 2486109 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: mmc:Mmcs_2094 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2485423..2486109 Mycobacterium vanbaalenii PYR-1 4646105 YP_953149.1 CDS truB NC_008726.1 2486106 2487014 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2486106..2487014 Mycobacterium vanbaalenii PYR-1 4646106 YP_953150.1 CDS Mvan_2330 NC_008726.1 2487033 2487521 D PFAM: CBS domain containing protein; KEGG: mmc:Mmcs_2096 putative signal-transduction protein with CBS domains; signal-transduction protein 2487033..2487521 Mycobacterium vanbaalenii PYR-1 4646107 YP_953151.1 CDS Mvan_2331 NC_008726.1 2487622 2487882 R hypothetical protein complement(2487622..2487882) Mycobacterium vanbaalenii PYR-1 4646108 YP_953152.1 CDS Mvan_2332 NC_008726.1 2487946 2490393 D KEGG: afm:Afu6g14570 hypothetical protein; hypothetical protein 2487946..2490393 Mycobacterium vanbaalenii PYR-1 4646109 YP_953153.1 CDS Mvan_2333 NC_008726.1 2490417 2491715 R PFAM: NLP/P60 protein; KEGG: mpa:MAP1203 hypothetical protein; NLP/P60 protein complement(2490417..2491715) Mycobacterium vanbaalenii PYR-1 4646110 YP_953154.1 CDS Mvan_2334 NC_008726.1 2491792 2493696 R KEGG: aor:AO090009000539 predicted protein; hypothetical protein complement(2491792..2493696) Mycobacterium vanbaalenii PYR-1 4646111 YP_953155.1 CDS Mvan_2335 NC_008726.1 2493837 2495237 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cjk:jk0342 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2493837..2495237) Mycobacterium vanbaalenii PYR-1 4646112 YP_953156.1 CDS Mvan_2336 NC_008726.1 2495234 2495968 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: fra:Francci3_0321 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(2495234..2495968) Mycobacterium vanbaalenii PYR-1 4646113 YP_953157.1 CDS Mvan_2337 NC_008726.1 2496191 2496835 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa9270 putative transcriptional regulator; TetR family transcriptional regulator 2496191..2496835 Mycobacterium vanbaalenii PYR-1 4646114 YP_953158.1 CDS Mvan_2338 NC_008726.1 2497000 2498190 D PFAM: Thiolase; KEGG: mpa:MAP2897c acetyl-CoA acyltransferase; lipid-transfer protein 2497000..2498190 Mycobacterium vanbaalenii PYR-1 4646115 YP_953159.1 CDS Mvan_2339 NC_008726.1 2498235 2498675 D KEGG: nfa:nfa20940 hypothetical protein; hypothetical protein 2498235..2498675 Mycobacterium vanbaalenii PYR-1 4646116 YP_953160.1 CDS Mvan_2340 NC_008726.1 2498677 2499570 D PFAM: MaoC domain protein dehydratase; KEGG: nfa:nfa20930 hypothetical protein; dehydratase 2498677..2499570 Mycobacterium vanbaalenii PYR-1 4646117 YP_953161.1 CDS Mvan_2341 NC_008726.1 2499588 2500463 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa20920 short chain dehydrogenase; short chain dehydrogenase 2499588..2500463 Mycobacterium vanbaalenii PYR-1 4646118 YP_953162.1 CDS Mvan_2342 NC_008726.1 2500466 2501722 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mpa:MAP2896c acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2500466..2501722 Mycobacterium vanbaalenii PYR-1 4646119 YP_953163.1 CDS Mvan_2343 NC_008726.1 2501719 2502558 D PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb3600c 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD; alpha/beta hydrolase fold protein 2501719..2502558 Mycobacterium vanbaalenii PYR-1 4646120 YP_953164.1 CDS Mvan_2344 NC_008726.1 2502555 2504150 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2502555..2504150 Mycobacterium vanbaalenii PYR-1 4646121 YP_953165.1 CDS Mvan_2345 NC_008726.1 2504152 2505045 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1716 short chain dehydrogenase; short chain dehydrogenase 2504152..2505045 Mycobacterium vanbaalenii PYR-1 4648015 YP_953166.1 CDS Mvan_2346 NC_008726.1 2505046 2505477 R KEGG: mmc:Mmcs_2680 hypothetical protein; hypothetical protein complement(2505046..2505477) Mycobacterium vanbaalenii PYR-1 4648016 YP_953167.1 CDS Mvan_2347 NC_008726.1 2505486 2506232 R PFAM: iron dependent repressor; FeoA family protein; KEGG: mmc:Mmcs_2097 iron (metal) dependent repressor, DtxR family; iron dependent repressor complement(2505486..2506232) Mycobacterium vanbaalenii PYR-1 4648017 YP_953168.1 CDS Mvan_2348 NC_008726.1 2506325 2507299 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2506325..2507299 Mycobacterium vanbaalenii PYR-1 4648018 YP_953169.1 CDS rpsO NC_008726.1 2507456 2507725 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2507456..2507725 Mycobacterium vanbaalenii PYR-1 4648019 YP_953170.1 CDS Mvan_2350 NC_008726.1 2508105 2510369 D KEGG: mmc:Mmcs_2100 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 2508105..2510369 Mycobacterium vanbaalenii PYR-1 4648020 YP_953171.1 CDS Mvan_2351 NC_008726.1 2510347 2511702 D PFAM: peptidase M16 domain protein; KEGG: mmc:Mmcs_2101 peptidase M16-like protein; peptidase M16 domain-containing protein 2510347..2511702 Mycobacterium vanbaalenii PYR-1 4648021 YP_953172.1 CDS Mvan_2352 NC_008726.1 2511721 2512614 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_2102 twin-arginine translocation pathway signal; beta-lactamase 2511721..2512614 Mycobacterium vanbaalenii PYR-1 4648022 YP_953173.1 CDS Mvan_2353 NC_008726.1 2512606 2513184 R KEGG: nfa:nfa43510 hypothetical protein; hypothetical protein complement(2512606..2513184) Mycobacterium vanbaalenii PYR-1 4648023 YP_953174.1 CDS Mvan_2354 NC_008726.1 2513210 2513587 D PFAM: SEC-C motif domain protein; KEGG: mmc:Mmcs_2103 sec-C motif containing protein; SecC motif-containing protein 2513210..2513587 Mycobacterium vanbaalenii PYR-1 4648024 YP_953175.1 CDS Mvan_2355 NC_008726.1 2513593 2514708 R KEGG: mmc:Mmcs_2104 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase complement(2513593..2514708) Mycobacterium vanbaalenii PYR-1 4648025 YP_953176.1 CDS Mvan_2356 NC_008726.1 2514842 2515315 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_2105 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2514842..2515315 Mycobacterium vanbaalenii PYR-1 4648026 YP_953177.1 CDS Mvan_2357 NC_008726.1 2515319 2516083 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: cdi:DIP0671 putative hydrogenase nickel incorporation protein; hydrogenase nickel incorporation protein HypB complement(2515319..2516083) Mycobacterium vanbaalenii PYR-1 4648027 YP_953178.1 CDS Mvan_2358 NC_008726.1 2516076 2516474 R PFAM: hydrogenase expression/synthesis, HypA; KEGG: fra:Francci3_1078 putative hydrogenase nickel incorporation protein; hydrogenase expression/synthesis, HypA complement(2516076..2516474) Mycobacterium vanbaalenii PYR-1 4648028 YP_953179.1 CDS Mvan_2359 NC_008726.1 2516637 2518970 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: fra:Francci3_1072 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2516637..2518970 Mycobacterium vanbaalenii PYR-1 4648029 YP_953180.1 CDS Mvan_2360 NC_008726.1 2518967 2519218 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: fra:Francci3_1071 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2518967..2519218 Mycobacterium vanbaalenii PYR-1 4648030 YP_953181.1 CDS Mvan_2361 NC_008726.1 2519215 2520318 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: fra:Francci3_1070 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2519215..2520318 Mycobacterium vanbaalenii PYR-1 4648031 YP_953182.1 CDS Mvan_2362 NC_008726.1 2520311 2521381 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: fra:Francci3_1069 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2520311..2521381 Mycobacterium vanbaalenii PYR-1 4648032 YP_953183.1 CDS Mvan_2363 NC_008726.1 2521385 2522365 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:nfa12460 putative transcriptional regulator; helix-turn-helix domain-containing protein complement(2521385..2522365) Mycobacterium vanbaalenii PYR-1 4648033 YP_953184.1 CDS Mvan_2364 NC_008726.1 2522670 2523194 D KEGG: sru:SRU_0318 hypothetical protein; hypothetical protein 2522670..2523194 Mycobacterium vanbaalenii PYR-1 4648034 YP_953185.1 CDS Mvan_2365 NC_008726.1 2523280 2524245 D PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: fra:Francci3_1077 hydrogenase (NiFe) small subunit (HydA); NADH ubiquinone oxidoreductase, 20 kDa subunit 2523280..2524245 Mycobacterium vanbaalenii PYR-1 4648035 YP_953186.1 CDS Mvan_2366 NC_008726.1 2524270 2525880 D PFAM: nickel-dependent hydrogenase, large subunit; KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase; hydrogen:quinone oxidoreductase 2524270..2525880 Mycobacterium vanbaalenii PYR-1 4648036 YP_953187.1 CDS Mvan_2367 NC_008726.1 2525957 2526730 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_1075 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 2525957..2526730 Mycobacterium vanbaalenii PYR-1 4648037 YP_953188.1 CDS Mvan_2368 NC_008726.1 2526899 2528179 D KEGG: fra:Francci3_1074 hypothetical protein; hypothetical protein 2526899..2528179 Mycobacterium vanbaalenii PYR-1 4648038 YP_953189.1 CDS Mvan_2369 NC_008726.1 2528176 2529033 D PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: sal:Sala_3205 nitrogen-fixing NifU-like; Rieske (2Fe-2S) domain-containing protein 2528176..2529033 Mycobacterium vanbaalenii PYR-1 4648039 YP_953190.1 CDS Mvan_2370 NC_008726.1 2529030 2530223 D PFAM: NHL repeat containing protein; KEGG: fra:Francci3_1073 NHL repeat protein; NHL repeat-containing protein 2529030..2530223 Mycobacterium vanbaalenii PYR-1 4648040 YP_953191.1 CDS Mvan_2371 NC_008726.1 2530220 2531044 D hypothetical protein 2530220..2531044 Mycobacterium vanbaalenii PYR-1 4644568 YP_953192.1 CDS Mvan_2372 NC_008726.1 2531048 2531431 R KEGG: mmc:Mmcs_4453 hypothetical protein; hypothetical protein complement(2531048..2531431) Mycobacterium vanbaalenii PYR-1 4644569 YP_953193.1 CDS Mvan_2373 NC_008726.1 2531592 2533034 D PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2471 protein of unknown function DUF222; hypothetical protein 2531592..2533034 Mycobacterium vanbaalenii PYR-1 4644570 YP_953194.1 CDS Mvan_2374 NC_008726.1 2533151 2533888 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2533151..2533888 Mycobacterium vanbaalenii PYR-1 4644571 YP_953195.1 CDS Mvan_2375 NC_008726.1 2533885 2534352 D KEGG: mmc:Mmcs_2108 tetratricopeptide TPR_2; hypothetical protein 2533885..2534352 Mycobacterium vanbaalenii PYR-1 4644572 YP_953196.1 CDS Mvan_2376 NC_008726.1 2534349 2534804 D KEGG: mpa:MAP2876c hypothetical protein; hypothetical protein 2534349..2534804 Mycobacterium vanbaalenii PYR-1 4644573 YP_953197.1 CDS Mvan_2377 NC_008726.1 2534817 2535278 D KEGG: mmc:Mmcs_2110 hypothetical protein; hypothetical protein 2534817..2535278 Mycobacterium vanbaalenii PYR-1 4644574 YP_953198.1 CDS Mvan_2378 NC_008726.1 2535272 2536192 R PFAM: HpcH/HpaI aldolase; KEGG: mbo:Mb3102c hypothetical protein; HpcH/HpaI aldolase complement(2535272..2536192) Mycobacterium vanbaalenii PYR-1 4644575 YP_953199.1 CDS Mvan_2379 NC_008726.1 2536198 2536935 R PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_2111 dienelactone hydrolase; dienelactone hydrolase complement(2536198..2536935) Mycobacterium vanbaalenii PYR-1 4644576 YP_953200.1 CDS thyA NC_008726.1 2536978 2537778 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2536978..2537778 Mycobacterium vanbaalenii PYR-1 4644577 YP_953201.1 CDS Mvan_2381 NC_008726.1 2537834 2538322 D PFAM: dihydrofolate reductase region; KEGG: mmc:Mmcs_2113 dihydrofolate reductase; dihydrofolate reductase 2537834..2538322 Mycobacterium vanbaalenii PYR-1 4644578 YP_953202.1 CDS Mvan_2382 NC_008726.1 2538444 2539166 D KEGG: bcn:Bcen_3168 hypothetical protein; hypothetical protein 2538444..2539166 Mycobacterium vanbaalenii PYR-1 4644579 YP_953203.1 CDS Mvan_2383 NC_008726.1 2539227 2540462 D PFAM: protein of unknown function DUF1006; KEGG: mmc:Mmcs_2114 protein of unknown function DUF1006; hypothetical protein 2539227..2540462 Mycobacterium vanbaalenii PYR-1 4644580 YP_953204.1 CDS Mvan_2384 NC_008726.1 2540467 2541363 D PFAM: alpha/beta hydrolase fold; KEGG: pcr:Pcryo_1253 alpha/beta hydrolase fold; haloalkane dehalogenase 2540467..2541363 Mycobacterium vanbaalenii PYR-1 4644581 YP_953205.1 CDS Mvan_2385 NC_008726.1 2541476 2542564 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_0356 diguanylate cyclase; diguanylate cyclase 2541476..2542564 Mycobacterium vanbaalenii PYR-1 4644582 YP_953206.1 CDS thyX NC_008726.1 2542627 2543379 D flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 2542627..2543379 Mycobacterium vanbaalenii PYR-1 4644583 YP_953207.1 CDS Mvan_2387 NC_008726.1 2543424 2544335 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2543424..2544335 Mycobacterium vanbaalenii PYR-1 4644584 YP_953208.1 CDS Mvan_2388 NC_008726.1 2544332 2546008 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mmc:Mmcs_2117 beta-lactamase-like protein; beta-lactamase domain-containing protein 2544332..2546008 Mycobacterium vanbaalenii PYR-1 4644585 YP_953209.1 CDS Mvan_2389 NC_008726.1 2546389 2547048 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tfu:Tfu_1330 response regulator receiver; two component transcriptional regulator complement(2546389..2547048) Mycobacterium vanbaalenii PYR-1 4644586 YP_953210.1 CDS Mvan_2390 NC_008726.1 2547203 2548075 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mbo:Mb2772 hypothetical protein; putative methyltransferase complement(2547203..2548075) Mycobacterium vanbaalenii PYR-1 4644587 YP_953211.1 CDS Mvan_2391 NC_008726.1 2548072 2548890 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2548072..2548890) Mycobacterium vanbaalenii PYR-1 4644588 YP_953212.1 CDS Mvan_2392 NC_008726.1 2548901 2549215 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mmc:Mmcs_2120 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2548901..2549215) Mycobacterium vanbaalenii PYR-1 4644589 YP_953213.1 CDS Mvan_2393 NC_008726.1 2549329 2551962 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: mmc:Mmcs_2121 cell division FtsK/SpoIIIE; cell division protein FtsK 2549329..2551962 Mycobacterium vanbaalenii PYR-1 4644590 YP_953214.1 CDS Mvan_2394 NC_008726.1 2551972 2552493 R catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis; N-acetylglutamate synthase complement(2551972..2552493) Mycobacterium vanbaalenii PYR-1 4644591 YP_953215.1 CDS Mvan_2395 NC_008726.1 2552530 2553132 D TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2123 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2552530..2553132 Mycobacterium vanbaalenii PYR-1 4644592 YP_953216.1 CDS Mvan_2396 NC_008726.1 2553110 2553598 D PFAM: CinA domain protein; KEGG: mmc:Mmcs_2124 CinA-like protein; CinA domain-containing protein 2553110..2553598 Mycobacterium vanbaalenii PYR-1 4644818 YP_953217.1 CDS Mvan_2397 NC_008726.1 2553685 2554017 D PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_2125 transcriptional regulator, XRE family; XRE family transcriptional regulator 2553685..2554017 Mycobacterium vanbaalenii PYR-1 4644819 YP_953218.1 CDS Mvan_2398 NC_008726.1 2554127 2554945 D PFAM: PspA/IM30 family protein; KEGG: mmc:Mmcs_2126 phage shock protein A, PspA; phage shock protein A, PspA 2554127..2554945 Mycobacterium vanbaalenii PYR-1 4644820 YP_953219.1 CDS Mvan_2399 NC_008726.1 2554965 2555783 D KEGG: mmc:Mmcs_2127 putative conserved membrane alanine rich protein; putative membrane alanine rich protein 2554965..2555783 Mycobacterium vanbaalenii PYR-1 4644821 YP_953220.1 CDS Mvan_2400 NC_008726.1 2555817 2556371 R PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2128 limonene-1,2-epoxide hydrolase; limonene-1,2-epoxide hydrolase complement(2555817..2556371) Mycobacterium vanbaalenii PYR-1 4644822 YP_953221.1 CDS Mvan_2401 NC_008726.1 2556415 2557587 D KEGG: mmc:Mmcs_2129 UDP-glucuronosyl/UDP-glucosyltransferase; UDP-glucuronosyl/UDP-glucosyltransferase 2556415..2557587 Mycobacterium vanbaalenii PYR-1 4644823 YP_953222.1 CDS Mvan_2402 NC_008726.1 2557597 2557791 D KEGG: mmc:Mmcs_2130 hypothetical protein; hypothetical protein 2557597..2557791 Mycobacterium vanbaalenii PYR-1 4644824 YP_953223.1 CDS Mvan_2403 NC_008726.1 2557795 2558544 R KEGG: mmc:Mmcs_2132 hypothetical protein; hypothetical protein complement(2557795..2558544) Mycobacterium vanbaalenii PYR-1 4644825 YP_953224.1 CDS Mvan_2404 NC_008726.1 2558545 2559624 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mmc:Mmcs_2133 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE complement(2558545..2559624) Mycobacterium vanbaalenii PYR-1 4644826 YP_953225.1 CDS Mvan_2405 NC_008726.1 2559617 2560717 R TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mmc:Mmcs_2134 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD complement(2559617..2560717) Mycobacterium vanbaalenii PYR-1 4644827 YP_953226.1 CDS Mvan_2406 NC_008726.1 2560722 2561030 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mmc:Mmcs_2135 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF complement(2560722..2561030) Mycobacterium vanbaalenii PYR-1 4644828 YP_953227.1 CDS Mvan_2407 NC_008726.1 2561046 2563316 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: mmc:Mmcs_2136 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF complement(2561046..2563316) Mycobacterium vanbaalenii PYR-1 4644829 YP_953228.1 CDS Mvan_2408 NC_008726.1 2563313 2563567 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mmc:Mmcs_2137 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF complement(2563313..2563567) Mycobacterium vanbaalenii PYR-1 4644830 YP_953229.1 CDS Mvan_2409 NC_008726.1 2563570 2564079 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rha:RHA1_ro04609 hydrogenase maturation protease; hydrogenase maturation protease complement(2563570..2564079) Mycobacterium vanbaalenii PYR-1 4644831 YP_953230.1 CDS Mvan_2410 NC_008726.1 2564195 2565514 R KEGG: mmc:Mmcs_2139 hypothetical protein; hypothetical protein complement(2564195..2565514) Mycobacterium vanbaalenii PYR-1 4644832 YP_953231.1 CDS Mvan_2411 NC_008726.1 2565511 2566149 R KEGG: mmc:Mmcs_2140 hypothetical protein; hypothetical protein complement(2565511..2566149) Mycobacterium vanbaalenii PYR-1 4644833 YP_953232.1 CDS Mvan_2412 NC_008726.1 2566146 2566784 R KEGG: mmc:Mmcs_2141 hypothetical protein; hypothetical protein complement(2566146..2566784) Mycobacterium vanbaalenii PYR-1 4644834 YP_953233.1 CDS Mvan_2413 NC_008726.1 2566784 2567677 R PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_2142 nitrogen-fixing NifU-like protein; NifU domain-containing protein complement(2566784..2567677) Mycobacterium vanbaalenii PYR-1 4644835 YP_953234.1 CDS Mvan_2415 NC_008726.1 2569267 2570499 D PFAM: Integrase, catalytic region; KEGG: dsy:DSY1306 hypothetical protein; integrase catalytic subunit 2569267..2570499 Mycobacterium vanbaalenii PYR-1 4644837 YP_953235.1 CDS Mvan_2416 NC_008726.1 2570953 2572008 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmc:Mmcs_2144 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(2570953..2572008) Mycobacterium vanbaalenii PYR-1 4644838 YP_953236.1 CDS Mvan_2417 NC_008726.1 2572094 2572897 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: mmc:Mmcs_2145 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB complement(2572094..2572897) Mycobacterium vanbaalenii PYR-1 4644839 YP_953237.1 CDS Mvan_2418 NC_008726.1 2572899 2573309 R TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: mmc:Mmcs_2146 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA complement(2572899..2573309) Mycobacterium vanbaalenii PYR-1 4644840 YP_953238.1 CDS Mvan_2419 NC_008726.1 2573293 2574180 R PFAM: alpha/beta hydrolase fold; peptidase S15; KEGG: mpa:MAP1727 hypothetical protein; alpha/beta hydrolase fold protein complement(2573293..2574180) Mycobacterium vanbaalenii PYR-1 4644841 YP_953239.1 CDS recA NC_008726.1 2574339 2575391 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2574339..2575391 Mycobacterium vanbaalenii PYR-1 4644842 YP_953240.1 CDS recX NC_008726.1 2575360 2575914 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2575360..2575914 Mycobacterium vanbaalenii PYR-1 4647665 YP_953241.1 CDS Mvan_2422 NC_008726.1 2576008 2577588 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mpa:MAP1685 hypothetical protein; hypothetical protein 2576008..2577588 Mycobacterium vanbaalenii PYR-1 4647666 YP_953242.1 CDS Mvan_2423 NC_008726.1 2577554 2577820 R KEGG: mmc:Mmcs_2151 hypothetical protein; hypothetical protein complement(2577554..2577820) Mycobacterium vanbaalenii PYR-1 4647667 YP_953243.1 CDS Mvan_2424 NC_008726.1 2577817 2578221 R PFAM: protein of unknown function DUF1622; KEGG: mmc:Mmcs_2152 protein of unknown function DUF1622; hypothetical protein complement(2577817..2578221) Mycobacterium vanbaalenii PYR-1 4647668 YP_953244.1 CDS Mvan_2425 NC_008726.1 2578234 2579109 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2153 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit complement(2578234..2579109) Mycobacterium vanbaalenii PYR-1 4647669 YP_953245.1 CDS Mvan_2426 NC_008726.1 2579109 2579789 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2154 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit complement(2579109..2579789) Mycobacterium vanbaalenii PYR-1 4647670 YP_953246.1 CDS Mvan_2427 NC_008726.1 2579817 2580656 R PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_2155 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(2579817..2580656) Mycobacterium vanbaalenii PYR-1 4647671 YP_953247.1 CDS Mvan_2428 NC_008726.1 2580686 2581480 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2156 ABC transporter related; ABC transporter--like protein complement(2580686..2581480) Mycobacterium vanbaalenii PYR-1 4647672 YP_953248.1 CDS Mvan_2429 NC_008726.1 2581661 2583193 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2581661..2583193 Mycobacterium vanbaalenii PYR-1 4647673 YP_953249.1 CDS Mvan_2430 NC_008726.1 2583190 2583789 D KEGG: mmc:Mmcs_2158 putative conserved transmembrane protein; putative transmembrane protein 2583190..2583789 Mycobacterium vanbaalenii PYR-1 4647674 YP_953250.1 CDS Mvan_2431 NC_008726.1 2583793 2585190 R PFAM: protein of unknown function DUF349; KEGG: mmc:Mmcs_2159 protein of unknown function DUF349; hypothetical protein complement(2583793..2585190) Mycobacterium vanbaalenii PYR-1 4647675 YP_953251.1 CDS Mvan_2432 NC_008726.1 2585391 2586269 D KEGG: mmc:Mmcs_2160 hypothetical protein; hypothetical protein 2585391..2586269 Mycobacterium vanbaalenii PYR-1 4647676 YP_953252.1 CDS Mvan_2433 NC_008726.1 2586271 2586966 D KEGG: mbo:Mb2747c conserved hypothetical alanine rich protein; hypothetical protein 2586271..2586966 Mycobacterium vanbaalenii PYR-1 4647677 YP_953253.1 CDS miaA NC_008726.1 2586972 2587898 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2586972..2587898 Mycobacterium vanbaalenii PYR-1 4647678 YP_953254.1 CDS dapF NC_008726.1 2587903 2588772 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2587903..2588772 Mycobacterium vanbaalenii PYR-1 4647679 YP_953255.1 CDS Mvan_2436 NC_008726.1 2588858 2590306 D PFAM: GTP-binding protein, HSR1-related; KEGG: mmc:Mmcs_2164 GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 2588858..2590306 Mycobacterium vanbaalenii PYR-1 4647680 YP_953256.1 CDS Mvan_2437 NC_008726.1 2590521 2591852 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_2165 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 2590521..2591852 Mycobacterium vanbaalenii PYR-1 4647681 YP_953257.1 CDS Mvan_2438 NC_008726.1 2591825 2594152 R TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mmc:Mmcs_2166 molybdopterin guanine dinucleotide-containing S/N-oxide reductase; molybdopterin guanine dinucleotide-containing S/N-oxide reductase complement(2591825..2594152) Mycobacterium vanbaalenii PYR-1 4647682 YP_953258.1 CDS Mvan_2439 NC_008726.1 2594212 2595387 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mtu:Rv2724c probable acyl-CoA dehydrogenase FadE20; long-chain-acyl-CoA dehydrogenase 2594212..2595387 Mycobacterium vanbaalenii PYR-1 4647683 YP_953259.1 CDS Mvan_2440 NC_008726.1 2595563 2597623 D PFAM: LGFP repeat protein; KEGG: mmc:Mmcs_2167 LGFP; LGFP repeat-containing protein 2595563..2597623 Mycobacterium vanbaalenii PYR-1 4647684 YP_953260.1 CDS Mvan_2441 NC_008726.1 2597656 2598354 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(2597656..2598354) Mycobacterium vanbaalenii PYR-1 4647685 YP_953261.1 CDS Mvan_2442 NC_008726.1 2598451 2599059 D PFAM: Peptidoglycan-binding LysM; KEGG: mmc:Mmcs_2169 peptidoglycan-binding LysM; peptidoglycan-binding LysM 2598451..2599059 Mycobacterium vanbaalenii PYR-1 4647686 YP_953262.1 CDS nrdR NC_008726.1 2599222 2599686 D PFAM: ATP-cone domain protein; KEGG: mmc:Mmcs_2170 ribonucleotide reductase regulator NrdR-like protein; transcriptional regulator NrdR 2599222..2599686 Mycobacterium vanbaalenii PYR-1 4647687 YP_953263.1 CDS Mvan_2444 NC_008726.1 2599701 2600390 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mbo:Mb2735 hypothetical protein; PhzF family phenazine biosynthesis protein complement(2599701..2600390) Mycobacterium vanbaalenii PYR-1 4647688 YP_953264.1 CDS Mvan_2445 NC_008726.1 2600420 2601442 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: mmc:Mmcs_2172 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2600420..2601442) Mycobacterium vanbaalenii PYR-1 4647689 YP_953265.1 CDS Mvan_2446 NC_008726.1 2601467 2602456 R PFAM: protein of unknown function DUF75; KEGG: mmc:Mmcs_2173 protein of unknown function DUF75; hypothetical protein complement(2601467..2602456) Mycobacterium vanbaalenii PYR-1 4645494 YP_953266.1 CDS Mvan_2447 NC_008726.1 2602675 2603454 D KEGG: mpa:MAP2830c hypothetical protein; hypothetical protein 2602675..2603454 Mycobacterium vanbaalenii PYR-1 4645495 YP_953267.1 CDS Mvan_2448 NC_008726.1 2603456 2604871 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(2603456..2604871) Mycobacterium vanbaalenii PYR-1 4645496 YP_953268.1 CDS Mvan_2449 NC_008726.1 2605049 2606098 D KEGG: mpa:MAP2828c hypothetical protein; hypothetical protein 2605049..2606098 Mycobacterium vanbaalenii PYR-1 4645497 YP_953269.1 CDS Mvan_2450 NC_008726.1 2606123 2606812 R PFAM: iron dependent repressor; FeoA family protein; KEGG: mmc:Mmcs_2176 iron (metal) dependent repressor, DtxR family; iron dependent repressor complement(2606123..2606812) Mycobacterium vanbaalenii PYR-1 4645498 YP_953270.1 CDS Mvan_2451 NC_008726.1 2606953 2607942 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase; RNA polymerase sigma factor SigB complement(2606953..2607942) Mycobacterium vanbaalenii PYR-1 4645499 YP_953271.1 CDS Mvan_2452 NC_008726.1 2608060 2608497 R KEGG: mmc:Mmcs_2178 hypothetical protein; hypothetical protein complement(2608060..2608497) Mycobacterium vanbaalenii PYR-1 4645500 YP_953272.1 CDS Mvan_2453 NC_008726.1 2608551 2608796 D KEGG: mmc:Mmcs_2179 hypothetical protein; hypothetical protein 2608551..2608796 Mycobacterium vanbaalenii PYR-1 4645501 YP_953273.1 CDS Mvan_2454 NC_008726.1 2608786 2609820 R PFAM: ribonuclease BN; KEGG: mmc:Mmcs_2180 ribonuclease BN; ribonuclease BN complement(2608786..2609820) Mycobacterium vanbaalenii PYR-1 4645502 YP_953274.1 CDS Mvan_2455 NC_008726.1 2609848 2610039 R KEGG: mmc:Mmcs_2181 hypothetical protein; hypothetical protein complement(2609848..2610039) Mycobacterium vanbaalenii PYR-1 4645503 YP_953275.1 CDS Mvan_2456 NC_008726.1 2610173 2610529 D PFAM: protein of unknown function DUF952; KEGG: mmc:Mmcs_2182 protein of unknown function DUF952; hypothetical protein 2610173..2610529 Mycobacterium vanbaalenii PYR-1 4645504 YP_953276.1 CDS Mvan_2457 NC_008726.1 2610526 2610927 R PFAM: Endoribonuclease L-PSP; KEGG: mpa:MAP2821 hypothetical protein; endoribonuclease L-PSP complement(2610526..2610927) Mycobacterium vanbaalenii PYR-1 4645505 YP_953277.1 CDS Mvan_2458 NC_008726.1 2610972 2611754 D KEGG: mmc:Mmcs_2675 hypothetical protein; hypothetical protein 2610972..2611754 Mycobacterium vanbaalenii PYR-1 4645506 YP_953278.1 CDS Mvan_2459 NC_008726.1 2611869 2613542 D KEGG: mtc:MT3615.3 PE_PGRS family protein; PE_PGRS family protein 2611869..2613542 Mycobacterium vanbaalenii PYR-1 4645507 YP_953279.1 CDS Mvan_2460 NC_008726.1 2613546 2614637 R PFAM: O-methyltransferase, family 2; KEGG: mmc:Mmcs_2184 O-methyltransferase, family 2; O-methyltransferase family protein complement(2613546..2614637) Mycobacterium vanbaalenii PYR-1 4645508 YP_953280.1 CDS Mvan_2461 NC_008726.1 2614695 2616131 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor complement(2614695..2616131) Mycobacterium vanbaalenii PYR-1 4645509 YP_953281.1 CDS Mvan_2462 NC_008726.1 2616352 2617170 R PFAM: ROK family protein; KEGG: mmc:Mmcs_2186 polyphosphate-glucose phosphotransferase; polyphosphate--glucose phosphotransferase complement(2616352..2617170) Mycobacterium vanbaalenii PYR-1 4645510 YP_953282.1 CDS Mvan_2463 NC_008726.1 2617276 2618184 D PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_2187 inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 2617276..2618184 Mycobacterium vanbaalenii PYR-1 4645511 YP_953283.1 CDS Mvan_2464 NC_008726.1 2618187 2618852 R KEGG: mmc:Mmcs_2188 hypothetical protein; hypothetical protein complement(2618187..2618852) Mycobacterium vanbaalenii PYR-1 4645512 YP_953284.1 CDS Mvan_2465 NC_008726.1 2619021 2619323 D KEGG: mmc:Mmcs_2189 hypothetical protein; hypothetical protein 2619021..2619323 Mycobacterium vanbaalenii PYR-1 4645513 YP_953285.1 CDS Mvan_2466 NC_008726.1 2619345 2619824 R KEGG: mmc:Mmcs_2190 putative conserved alanine rich transmembrane protein; putative alanine rich transmembrane protein complement(2619345..2619824) Mycobacterium vanbaalenii PYR-1 4645514 YP_953286.1 CDS dut NC_008726.1 2619850 2620314 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2619850..2620314 Mycobacterium vanbaalenii PYR-1 4645515 YP_953287.1 CDS Mvan_2468 NC_008726.1 2620385 2621116 D KEGG: mmc:Mmcs_2192 hypothetical protein; hypothetical protein 2620385..2621116 Mycobacterium vanbaalenii PYR-1 4645516 YP_953288.1 CDS Mvan_2469 NC_008726.1 2621207 2621932 R KEGG: mmc:Mmcs_2193 hypothetical protein; hypothetical protein complement(2621207..2621932) Mycobacterium vanbaalenii PYR-1 4645517 YP_953289.1 CDS Mvan_2470 NC_008726.1 2622053 2622448 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmc:Mmcs_2194 nucleic acid binding, OB-fold, tRNA/helicase-type; nucleic acid-binding protein 2622053..2622448 Mycobacterium vanbaalenii PYR-1 4645518 YP_953290.1 CDS Mvan_2471 NC_008726.1 2622445 2623155 D KEGG: mmc:Mmcs_2195 hypothetical protein; hypothetical protein 2622445..2623155 Mycobacterium vanbaalenii PYR-1 4648111 YP_953291.1 CDS Mvan_2472 NC_008726.1 2623164 2623829 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mmc:Mmcs_2196 TrkA-N; TrkA domain-containing protein complement(2623164..2623829) Mycobacterium vanbaalenii PYR-1 4648112 YP_953292.1 CDS Mvan_2473 NC_008726.1 2623835 2624506 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mmc:Mmcs_2197 TrkA-N; TrkA domain-containing protein complement(2623835..2624506) Mycobacterium vanbaalenii PYR-1 4648113 YP_953293.1 CDS Mvan_2474 NC_008726.1 2624607 2626601 D KEGG: mmc:Mmcs_2198 amino acid permease-associated region; amino acid permease-associated protein 2624607..2626601 Mycobacterium vanbaalenii PYR-1 4648114 YP_953294.1 CDS Mvan_2475 NC_008726.1 2626598 2627785 D PFAM: (Uracil-5)-methyltransferase; KEGG: mmc:Mmcs_2199 deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase 2626598..2627785 Mycobacterium vanbaalenii PYR-1 4648115 YP_953295.1 CDS nhaA NC_008726.1 2627804 2629198 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 2627804..2629198 Mycobacterium vanbaalenii PYR-1 4648116 YP_953296.1 CDS Mvan_2477 NC_008726.1 2629227 2631140 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2629227..2631140 Mycobacterium vanbaalenii PYR-1 4648117 YP_953297.1 CDS Mvan_2478 NC_008726.1 2631202 2632341 D KEGG: mmc:Mmcs_1917 secretory lipase; secretory lipase 2631202..2632341 Mycobacterium vanbaalenii PYR-1 4648118 YP_953298.1 CDS Mvan_2479 NC_008726.1 2632348 2633628 R PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease; 3'-5' exonuclease complement(2632348..2633628) Mycobacterium vanbaalenii PYR-1 4648119 YP_953299.1 CDS Mvan_2480 NC_008726.1 2633634 2634215 R KEGG: mmc:Mmcs_2211 hypothetical protein; hypothetical protein complement(2633634..2634215) Mycobacterium vanbaalenii PYR-1 4648120 YP_953300.1 CDS hemE NC_008726.1 2634301 2635365 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2634301..2635365 Mycobacterium vanbaalenii PYR-1 4648121 YP_953301.1 CDS Mvan_2482 NC_008726.1 2635362 2636723 D catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 2635362..2636723 Mycobacterium vanbaalenii PYR-1 4648122 YP_953302.1 CDS Mvan_2483 NC_008726.1 2636763 2637467 D PFAM: Chlorite dismutase; KEGG: mmc:Mmcs_2214 chlorite dismutase; chlorite dismutase 2636763..2637467 Mycobacterium vanbaalenii PYR-1 4648123 YP_953303.1 CDS Mvan_2484 NC_008726.1 2637581 2638093 R hypothetical protein complement(2637581..2638093) Mycobacterium vanbaalenii PYR-1 4648124 YP_953304.1 CDS Mvan_2486 NC_008726.1 2638539 2639327 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpa:MAP0986c putative diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(2638539..2639327) Mycobacterium vanbaalenii PYR-1 4648126 YP_953305.1 CDS Mvan_2487 NC_008726.1 2639541 2639951 R KEGG: mmc:Mmcs_2216 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(2639541..2639951) Mycobacterium vanbaalenii PYR-1 4648127 YP_953306.1 CDS Mvan_2488 NC_008726.1 2639962 2641227 R KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein; putative integral membrane protein complement(2639962..2641227) Mycobacterium vanbaalenii PYR-1 4648128 YP_953307.1 CDS Mvan_2489 NC_008726.1 2641263 2642822 R PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mmc:Mmcs_2218 TAP-like protein; TAP domain-containing protein complement(2641263..2642822) Mycobacterium vanbaalenii PYR-1 4648129 YP_953308.1 CDS Mvan_2490 NC_008726.1 2642847 2643641 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: mmc:Mmcs_2219 bifunctional deaminase-reductase-like protein; hypothetical protein complement(2642847..2643641) Mycobacterium vanbaalenii PYR-1 4648130 YP_953309.1 CDS Mvan_2491 NC_008726.1 2643676 2644713 D PFAM: AFG1-family ATPase; KEGG: mmc:Mmcs_2220 AFG1-like ATPase; AFG1 family ATPase 2643676..2644713 Mycobacterium vanbaalenii PYR-1 4648131 YP_953310.1 CDS Mvan_2492 NC_008726.1 2644689 2645225 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_2221 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2644689..2645225) Mycobacterium vanbaalenii PYR-1 4648132 YP_953311.1 CDS Mvan_2493 NC_008726.1 2645210 2645713 R KEGG: mmc:Mmcs_2222 hypothetical protein; hypothetical protein complement(2645210..2645713) Mycobacterium vanbaalenii PYR-1 4648133 YP_953312.1 CDS Mvan_2494 NC_008726.1 2645753 2646178 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: fra:Francci3_4252 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein complement(2645753..2646178) Mycobacterium vanbaalenii PYR-1 4648134 YP_953313.1 CDS Mvan_2495 NC_008726.1 2646207 2646809 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein; KEGG: mmc:Mmcs_2223 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(2646207..2646809) Mycobacterium vanbaalenii PYR-1 4648135 YP_953314.1 CDS Mvan_2496 NC_008726.1 2646806 2647327 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_2224 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(2646806..2647327) Mycobacterium vanbaalenii PYR-1 4643907 YP_953315.1 CDS Mvan_2497 NC_008726.1 2647324 2648043 R PFAM: Clp N terminal domain protein; KEGG: mmc:Mmcs_2225 Clp, N terminal; Clp N terminal domain-containing protein complement(2647324..2648043) Mycobacterium vanbaalenii PYR-1 4643908 YP_953316.1 CDS Mvan_2498 NC_008726.1 2648093 2648572 R KEGG: mmc:Mmcs_2226 hypothetical protein; hypothetical protein complement(2648093..2648572) Mycobacterium vanbaalenii PYR-1 4643909 YP_953317.1 CDS Mvan_2499 NC_008726.1 2648649 2648861 D KEGG: mmc:Mmcs_2227 transcriptional regulator, AraC family; hypothetical protein 2648649..2648861 Mycobacterium vanbaalenii PYR-1 4643910 YP_953318.1 CDS Mvan_2500 NC_008726.1 2649009 2649608 D KEGG: mbo:Mb2834 hypothetical protein; hypothetical protein 2649009..2649608 Mycobacterium vanbaalenii PYR-1 4643911 YP_953319.1 CDS Mvan_2501 NC_008726.1 2649720 2651219 D PFAM: Integrase, catalytic region; KEGG: mtc:MT2879 IS1604, transposase; integrase catalytic subunit 2649720..2651219 Mycobacterium vanbaalenii PYR-1 4643912 YP_953320.1 CDS Mvan_2502 NC_008726.1 2651216 2652031 D SMART: AAA ATPase; KEGG: mtc:MT2880 general secretion pathway protein A-related protein; ATPase AAA 2651216..2652031 Mycobacterium vanbaalenii PYR-1 4643913 YP_953321.1 CDS Mvan_2504 NC_008726.1 2652405 2652827 R KEGG: mmc:Mmcs_2890 hypothetical protein; hypothetical protein complement(2652405..2652827) Mycobacterium vanbaalenii PYR-1 4643915 YP_953322.1 CDS Mvan_2505 NC_008726.1 2653070 2653306 R hypothetical protein complement(2653070..2653306) Mycobacterium vanbaalenii PYR-1 4643916 YP_953323.1 CDS Mvan_2506 NC_008726.1 2653401 2653694 R KEGG: mmc:Mmcs_5105 hypothetical protein; hypothetical protein complement(2653401..2653694) Mycobacterium vanbaalenii PYR-1 4643917 YP_953324.1 CDS Mvan_2507 NC_008726.1 2653746 2654747 R KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein complement(2653746..2654747) Mycobacterium vanbaalenii PYR-1 4643918 YP_953325.1 CDS Mvan_2508 NC_008726.1 2655123 2656280 D PFAM: phage integrase family protein; KEGG: mtc:MT2735 integrase; phage integrase family protein 2655123..2656280 Mycobacterium vanbaalenii PYR-1 4643919 YP_953326.1 CDS Mvan_2509 NC_008726.1 2656288 2656476 R TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: mtc:MT2734 gene 36 protein, putative; DNA binding domain-containing protein complement(2656288..2656476) Mycobacterium vanbaalenii PYR-1 4643920 YP_953327.1 CDS Mvan_2510 NC_008726.1 2656542 2656793 D hypothetical protein 2656542..2656793 Mycobacterium vanbaalenii PYR-1 4643921 YP_953328.1 CDS Mvan_2511 NC_008726.1 2657082 2657315 D hypothetical protein 2657082..2657315 Mycobacterium vanbaalenii PYR-1 4643922 YP_953329.1 CDS Mvan_2512 NC_008726.1 2657381 2657680 D KEGG: mmc:Mmcs_2920 hypothetical protein; hypothetical protein 2657381..2657680 Mycobacterium vanbaalenii PYR-1 4643923 YP_953330.1 CDS Mvan_2513 NC_008726.1 2657680 2659290 D KEGG: nfa:nfa2450 hypothetical protein; hypothetical protein 2657680..2659290 Mycobacterium vanbaalenii PYR-1 4643924 YP_953331.1 CDS Mvan_2514 NC_008726.1 2659294 2659758 D hypothetical protein 2659294..2659758 Mycobacterium vanbaalenii PYR-1 4643925 YP_953332.1 CDS Mvan_2515 NC_008726.1 2659755 2660060 D PFAM: transcription factor WhiB; transcription factor WhiB 2659755..2660060 Mycobacterium vanbaalenii PYR-1 4643926 YP_953333.1 CDS Mvan_2516 NC_008726.1 2660057 2660431 D hypothetical protein 2660057..2660431 Mycobacterium vanbaalenii PYR-1 4643927 YP_953334.1 CDS Mvan_2517 NC_008726.1 2660428 2660958 D KEGG: mmc:Mmcs_3807 hypothetical protein; hypothetical protein 2660428..2660958 Mycobacterium vanbaalenii PYR-1 4643928 YP_953335.1 CDS Mvan_2518 NC_008726.1 2661096 2661941 D KEGG: mmc:Mmcs_3805 phage major capsid protein, HK97; phage major capsid protein, HK97 2661096..2661941 Mycobacterium vanbaalenii PYR-1 4643929 YP_953336.1 CDS Mvan_2519 NC_008726.1 2662068 2662394 D hypothetical protein 2662068..2662394 Mycobacterium vanbaalenii PYR-1 4643930 YP_953337.1 CDS Mvan_2520 NC_008726.1 2662786 2663415 D hypothetical protein 2662786..2663415 Mycobacterium vanbaalenii PYR-1 4643931 YP_953338.1 CDS Mvan_2521 NC_008726.1 2663375 2663665 D PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr6149 transposase; transposase IS3/IS911 family protein 2663375..2663665 Mycobacterium vanbaalenii PYR-1 4643885 YP_953339.1 CDS Mvan_2522 NC_008726.1 2663662 2664597 D PFAM: Integrase, catalytic region; KEGG: cgb:cg1950 transposase; integrase catalytic subunit 2663662..2664597 Mycobacterium vanbaalenii PYR-1 4643886 YP_953340.1 CDS Mvan_2523 NC_008726.1 2665066 2665626 R hypothetical protein complement(2665066..2665626) Mycobacterium vanbaalenii PYR-1 4643887 YP_953341.1 CDS Mvan_2524 NC_008726.1 2665630 2666280 R hypothetical protein complement(2665630..2666280) Mycobacterium vanbaalenii PYR-1 4643888 YP_953342.1 CDS Mvan_2525 NC_008726.1 2666747 2667160 R KEGG: bja:bll1412 hypothetical protein; hypothetical protein complement(2666747..2667160) Mycobacterium vanbaalenii PYR-1 4643892 YP_953343.1 CDS Mvan_2526 NC_008726.1 2667586 2667849 R hypothetical protein complement(2667586..2667849) Mycobacterium vanbaalenii PYR-1 4643894 YP_953344.1 CDS Mvan_2527 NC_008726.1 2667912 2668592 R KEGG: mpa:MAP0102 hypothetical protein; hypothetical protein complement(2667912..2668592) Mycobacterium vanbaalenii PYR-1 4643895 YP_953345.1 CDS Mvan_2528 NC_008726.1 2669541 2670386 D KEGG: dar:Daro_2415 hypothetical protein; hypothetical protein 2669541..2670386 Mycobacterium vanbaalenii PYR-1 4643896 YP_953346.1 CDS Mvan_2529 NC_008726.1 2670433 2671641 R PFAM: filamentation induced by cAMP protein Fic; KEGG: cdi:DIP2317 conserved hypothetical DNA-binding protein; filamentation induced by cAMP protein fic complement(2670433..2671641) Mycobacterium vanbaalenii PYR-1 4643897 YP_953347.1 CDS Mvan_2530 NC_008726.1 2671752 2672219 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2898 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(2671752..2672219) Mycobacterium vanbaalenii PYR-1 4643898 YP_953348.1 CDS Mvan_2531 NC_008726.1 2672587 2673315 R PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1281 RNA polymerase, sigma 28 subunit; FliA/WhiG family RNA polymerase sigma factor complement(2672587..2673315) Mycobacterium vanbaalenii PYR-1 4643899 YP_953349.1 CDS Mvan_2532 NC_008726.1 2673872 2674027 R KEGG: sma:SAV2357 hypothetical protein; hypothetical protein complement(2673872..2674027) Mycobacterium vanbaalenii PYR-1 4643900 YP_953350.1 CDS Mvan_2533 NC_008726.1 2674077 2674538 R hypothetical protein complement(2674077..2674538) Mycobacterium vanbaalenii PYR-1 4643901 YP_953351.1 CDS Mvan_2534 NC_008726.1 2674539 2674811 R hypothetical protein complement(2674539..2674811) Mycobacterium vanbaalenii PYR-1 4643902 YP_953352.1 CDS Mvan_2535 NC_008726.1 2674869 2676098 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein 2674869..2676098 Mycobacterium vanbaalenii PYR-1 4643903 YP_953353.1 CDS Mvan_2536 NC_008726.1 2676120 2677199 R PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2797 ABC transporter related; ABC transporter--like protein complement(2676120..2677199) Mycobacterium vanbaalenii PYR-1 4643904 YP_953354.1 CDS Mvan_2537 NC_008726.1 2677196 2678005 R TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03637 probable ABC molybdenum transporter, permease protein; NifC-like ABC-type porter complement(2677196..2678005) Mycobacterium vanbaalenii PYR-1 4643905 YP_953355.1 CDS Mvan_2538 NC_008726.1 2678002 2678769 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rha:RHA1_ro03638 molybdate transporter, molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2678002..2678769) Mycobacterium vanbaalenii PYR-1 4643906 YP_953356.1 CDS Mvan_2539 NC_008726.1 2678766 2679170 R TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: mmc:Mmcs_0046 molybdenum-pterin binding domain protein; DNA binding domain-containing protein complement(2678766..2679170) Mycobacterium vanbaalenii PYR-1 4645420 YP_953357.1 CDS Mvan_2540 NC_008726.1 2679285 2680547 R KEGG: mmc:Mmcs_1247 hypothetical protein; hypothetical protein complement(2679285..2680547) Mycobacterium vanbaalenii PYR-1 4645421 YP_953358.1 CDS Mvan_2541 NC_008726.1 2680566 2681765 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3980 ABC transporter related; ABC transporter--like protein complement(2680566..2681765) Mycobacterium vanbaalenii PYR-1 4645422 YP_953359.1 CDS Mvan_2542 NC_008726.1 2681770 2682597 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2681770..2682597) Mycobacterium vanbaalenii PYR-1 4645423 YP_953360.1 CDS Mvan_2543 NC_008726.1 2682594 2683526 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0281 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2682594..2683526) Mycobacterium vanbaalenii PYR-1 4645424 YP_953361.1 CDS Mvan_2544 NC_008726.1 2683523 2684917 R PFAM: extracellular solute-binding protein, family 1; KEGG: noc:Noc_0282 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2683523..2684917) Mycobacterium vanbaalenii PYR-1 4645425 YP_953362.1 CDS Mvan_2545 NC_008726.1 2684939 2685964 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: fra:Francci3_2164 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator complement(2684939..2685964) Mycobacterium vanbaalenii PYR-1 4645426 YP_953363.1 CDS Mvan_2546 NC_008726.1 2686046 2687731 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: tfu:Tfu_0833 alpha amylase, catalytic subdomain; alpha amylase 2686046..2687731 Mycobacterium vanbaalenii PYR-1 4645427 YP_953364.1 CDS Mvan_2547 NC_008726.1 2687828 2688820 D KEGG: mmc:Mmcs_1078 hypothetical protein; hypothetical protein 2687828..2688820 Mycobacterium vanbaalenii PYR-1 4645428 YP_953365.1 CDS Mvan_2548 NC_008726.1 2688838 2689488 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_4126 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(2688838..2689488) Mycobacterium vanbaalenii PYR-1 4645429 YP_953366.1 CDS Mvan_2549 NC_008726.1 2689525 2690340 R PFAM: UspA domain protein; KEGG: mbo:Mb2053c hypothetical protein; UspA domain-containing protein complement(2689525..2690340) Mycobacterium vanbaalenii PYR-1 4645430 YP_953367.1 CDS Mvan_2550 NC_008726.1 2690334 2691329 R KEGG: mtc:MT2091 hypothetical protein; hypothetical protein complement(2690334..2691329) Mycobacterium vanbaalenii PYR-1 4645431 YP_953368.1 CDS Mvan_2552 NC_008726.1 2691877 2695344 D KEGG: mmc:Mmcs_2996 hypothetical protein; hypothetical protein 2691877..2695344 Mycobacterium vanbaalenii PYR-1 4645433 YP_953369.1 CDS Mvan_2553 NC_008726.1 2695467 2696174 R PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_2237 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(2695467..2696174) Mycobacterium vanbaalenii PYR-1 4645434 YP_953370.1 CDS Mvan_2554 NC_008726.1 2696317 2696814 R KEGG: mmc:Mmcs_2239 hypothetical protein; hypothetical protein complement(2696317..2696814) Mycobacterium vanbaalenii PYR-1 4645435 YP_953371.1 CDS Mvan_2555 NC_008726.1 2696852 2697721 D PFAM: aldo/keto reductase; KEGG: mpa:MAP2720c hypothetical protein; aldo/keto reductase 2696852..2697721 Mycobacterium vanbaalenii PYR-1 4645436 YP_953372.1 CDS Mvan_2556 NC_008726.1 2697743 2698372 D PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2240 thioesterase superfamily; thioesterase superfamily protein 2697743..2698372 Mycobacterium vanbaalenii PYR-1 4645437 YP_953373.1 CDS Mvan_2557 NC_008726.1 2698369 2698800 D KEGG: mmc:Mmcs_2241 hypothetical protein; hypothetical protein 2698369..2698800 Mycobacterium vanbaalenii PYR-1 4645438 YP_953374.1 CDS thrS NC_008726.1 2698875 2700950 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2698875..2700950 Mycobacterium vanbaalenii PYR-1 4645439 YP_953375.1 CDS Mvan_2559 NC_008726.1 2700952 2701500 D PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_2243 histidine triad (HIT) protein; histidine triad (HIT) protein 2700952..2701500 Mycobacterium vanbaalenii PYR-1 4645440 YP_953376.1 CDS Mvan_2560 NC_008726.1 2701497 2702168 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2244 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2701497..2702168 Mycobacterium vanbaalenii PYR-1 4645441 YP_953377.1 CDS Mvan_2561 NC_008726.1 2702165 2703109 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2702165..2703109 Mycobacterium vanbaalenii PYR-1 4645442 YP_953378.1 CDS Mvan_2562 NC_008726.1 2703117 2704271 D PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_2246 phosphatidyl-myo-inositol alpha-mannosyltransferase; phosphatidylinositol alpha-mannosyltransferase 2703117..2704271 Mycobacterium vanbaalenii PYR-1 4645443 YP_953379.1 CDS Mvan_2563 NC_008726.1 2704268 2705311 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_2247 NUDIX hydrolase; NUDIX hydrolase 2704268..2705311 Mycobacterium vanbaalenii PYR-1 4645444 YP_953380.1 CDS Mvan_2564 NC_008726.1 2705377 2706294 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 2705377..2706294 Mycobacterium vanbaalenii PYR-1 4643809 YP_953381.1 CDS Mvan_2565 NC_008726.1 2706295 2707143 D KEGG: mmc:Mmcs_2249 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 2706295..2707143 Mycobacterium vanbaalenii PYR-1 4643810 YP_953382.1 CDS Mvan_2566 NC_008726.1 2707140 2707727 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 2707140..2707727 Mycobacterium vanbaalenii PYR-1 4643811 YP_953383.1 CDS Mvan_2567 NC_008726.1 2707779 2708990 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mpa:MAP0150c putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(2707779..2708990) Mycobacterium vanbaalenii PYR-1 4643812 YP_953384.1 CDS Mvan_2569 NC_008726.1 2710836 2711429 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa19870 putative transcriptional regulator; TetR family transcriptional regulator 2710836..2711429 Mycobacterium vanbaalenii PYR-1 4643814 YP_953385.1 CDS Mvan_2570 NC_008726.1 2711514 2712269 D PFAM: protein of unknown function DUF28; KEGG: mmc:Mmcs_2251 protein of unknown function DUF28; hypothetical protein 2711514..2712269 Mycobacterium vanbaalenii PYR-1 4643815 YP_953386.1 CDS Mvan_2571 NC_008726.1 2712292 2712555 R KEGG: mmc:Mmcs_4365 hypothetical protein; hypothetical protein complement(2712292..2712555) Mycobacterium vanbaalenii PYR-1 4643816 YP_953387.1 CDS Mvan_2572 NC_008726.1 2712740 2713123 D KEGG: mmc:Mmcs_2264 hypothetical protein; hypothetical protein 2712740..2713123 Mycobacterium vanbaalenii PYR-1 4643817 YP_953388.1 CDS ruvC NC_008726.1 2713202 2713786 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2713202..2713786 Mycobacterium vanbaalenii PYR-1 4643818 YP_953389.1 CDS ruvA NC_008726.1 2713783 2714370 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2713783..2714370 Mycobacterium vanbaalenii PYR-1 4643819 YP_953390.1 CDS ruvB NC_008726.1 2714375 2715442 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2714375..2715442 Mycobacterium vanbaalenii PYR-1 4643820 YP_953391.1 CDS Mvan_2576 NC_008726.1 2715457 2715843 D PFAM: protein of unknown function DUF1304; KEGG: cgb:cg3407 hypothetical protein; hypothetical protein 2715457..2715843 Mycobacterium vanbaalenii PYR-1 4643821 YP_953392.1 CDS Mvan_2577 NC_008726.1 2715943 2716584 D KEGG: mmc:Mmcs_2272 hypothetical protein; hypothetical protein 2715943..2716584 Mycobacterium vanbaalenii PYR-1 4643822 YP_953393.1 CDS Mvan_2578 NC_008726.1 2716581 2720069 R TIGRFAM: thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain; KEGG: mpa:MAP1040c FadD9; thioester reductase domain-containing protein complement(2716581..2720069) Mycobacterium vanbaalenii PYR-1 4643823 YP_953394.1 CDS Mvan_2580 NC_008726.1 2720687 2722120 R catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase complement(2720687..2722120) Mycobacterium vanbaalenii PYR-1 4643825 YP_953395.1 CDS Mvan_2581 NC_008726.1 2722139 2723479 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(2722139..2723479) Mycobacterium vanbaalenii PYR-1 4643826 YP_953396.1 CDS yajC NC_008726.1 2723819 2724166 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 2723819..2724166 Mycobacterium vanbaalenii PYR-1 4643827 YP_953397.1 CDS secD NC_008726.1 2724253 2726052 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2724253..2726052 Mycobacterium vanbaalenii PYR-1 4643828 YP_953398.1 CDS secF NC_008726.1 2726056 2727327 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2726056..2727327 Mycobacterium vanbaalenii PYR-1 4643829 YP_953399.1 CDS Mvan_2585 NC_008726.1 2727376 2729022 D PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_2278 extracellular solute-binding protein, family 5; extracellular solute-binding protein 2727376..2729022 Mycobacterium vanbaalenii PYR-1 4643830 YP_953400.1 CDS Mvan_2586 NC_008726.1 2729019 2729543 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2729019..2729543 Mycobacterium vanbaalenii PYR-1 4643831 YP_953401.1 CDS Mvan_2587 NC_008726.1 2729583 2731949 D KEGG: mmc:Mmcs_2280 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 2729583..2731949 Mycobacterium vanbaalenii PYR-1 4643832 YP_953402.1 CDS Mvan_2588 NC_008726.1 2732028 2732984 R PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mmc:Mmcs_2283 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2732028..2732984) Mycobacterium vanbaalenii PYR-1 4643833 YP_953403.1 CDS Mvan_2589 NC_008726.1 2733037 2733714 D PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_2284 beta-lactamase-like protein; beta-lactamase domain-containing protein 2733037..2733714 Mycobacterium vanbaalenii PYR-1 4643860 YP_953404.1 CDS hisS NC_008726.1 2733711 2734979 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2733711..2734979 Mycobacterium vanbaalenii PYR-1 4643861 YP_953405.1 CDS Mvan_2591 NC_008726.1 2735360 2738926 D KEGG: mag:amb1277 RTX toxins and related Ca2+-binding protein; hypothetical protein 2735360..2738926 Mycobacterium vanbaalenii PYR-1 4643862 YP_953406.1 CDS Mvan_2592 NC_008726.1 2739037 2739729 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2287 ABC transporter related; ABC transporter--like protein complement(2739037..2739729) Mycobacterium vanbaalenii PYR-1 4643863 YP_953407.1 CDS Mvan_2593 NC_008726.1 2739729 2740562 R PFAM: ABC transporter related; KEGG: mmc:Mmcs_2288 ABC transporter related; ABC transporter--like protein complement(2739729..2740562) Mycobacterium vanbaalenii PYR-1 4643864 YP_953408.1 CDS Mvan_2594 NC_008726.1 2740559 2741671 R PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_2289 inner-membrane translocator; inner-membrane translocator complement(2740559..2741671) Mycobacterium vanbaalenii PYR-1 4643865 YP_953409.1 CDS Mvan_2595 NC_008726.1 2741668 2742552 R PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_2290 inner-membrane translocator; inner-membrane translocator complement(2741668..2742552) Mycobacterium vanbaalenii PYR-1 4643866 YP_953410.1 CDS Mvan_2596 NC_008726.1 2742560 2743768 R PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_2291 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2742560..2743768) Mycobacterium vanbaalenii PYR-1 4643867 YP_953411.1 CDS Mvan_2597 NC_008726.1 2744093 2744518 D KEGG: mmc:Mmcs_2292 putative conserved membrane protein; hypothetical protein 2744093..2744518 Mycobacterium vanbaalenii PYR-1 4643868 YP_953412.1 CDS Mvan_2598 NC_008726.1 2744509 2746713 R KEGG: nfa:nfa44160 putative helicase; putative helicase complement(2744509..2746713) Mycobacterium vanbaalenii PYR-1 4643869 YP_953413.1 CDS Mvan_2599 NC_008726.1 2746853 2747869 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmc:Mmcs_2296 radical SAM; radical SAM domain-containing protein 2746853..2747869 Mycobacterium vanbaalenii PYR-1 4643870 YP_953414.1 CDS Mvan_2600 NC_008726.1 2747884 2749158 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_2297 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2747884..2749158) Mycobacterium vanbaalenii PYR-1 4643871 YP_953415.1 CDS Mvan_2601 NC_008726.1 2749155 2750288 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2298 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(2749155..2750288) Mycobacterium vanbaalenii PYR-1 4643872 YP_953416.1 CDS Mvan_2602 NC_008726.1 2750322 2751551 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2; amidohydrolase 2 complement(2750322..2751551) Mycobacterium vanbaalenii PYR-1 4643873 YP_953417.1 CDS Mvan_2603 NC_008726.1 2751683 2752309 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2751683..2752309) Mycobacterium vanbaalenii PYR-1 4643874 YP_953418.1 CDS Mvan_2604 NC_008726.1 2752385 2753281 D KEGG: mmc:Mmcs_2301 hypothetical protein; hypothetical protein 2752385..2753281 Mycobacterium vanbaalenii PYR-1 4643875 YP_953419.1 CDS Mvan_2605 NC_008726.1 2753350 2754981 D KEGG: sma:SAV1154 hypothetical protein; hypothetical protein 2753350..2754981 Mycobacterium vanbaalenii PYR-1 4643876 YP_953420.1 CDS Mvan_2606 NC_008726.1 2754978 2755754 R hypothetical protein complement(2754978..2755754) Mycobacterium vanbaalenii PYR-1 4643877 YP_953421.1 CDS Mvan_2607 NC_008726.1 2755785 2757428 R PFAM: protein of unknown function DUF885; KEGG: mmc:Mmcs_2303 protein of unknown function DUF885; hypothetical protein complement(2755785..2757428) Mycobacterium vanbaalenii PYR-1 4643878 YP_953422.1 CDS Mvan_2608 NC_008726.1 2757421 2758317 R PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: mmc:Mmcs_2304 protein of unknown function, zinc metallopeptidase putative; hypothetical protein complement(2757421..2758317) Mycobacterium vanbaalenii PYR-1 4643879 YP_953423.1 CDS Mvan_2609 NC_008726.1 2758420 2759880 D PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2305 carboxylesterase, type B; carboxylesterase 2758420..2759880 Mycobacterium vanbaalenii PYR-1 4643880 YP_953424.1 CDS Mvan_2610 NC_008726.1 2759885 2760658 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1681c hypothetical protein; enoyl-CoA hydratase/isomerase complement(2759885..2760658) Mycobacterium vanbaalenii PYR-1 4643881 YP_953425.1 CDS Mvan_2611 NC_008726.1 2760779 2761186 D PFAM: DGPFAETKE family protein; KEGG: mmc:Mmcs_5295 DGPFAETKE domain containing protein; DGPFAETKE family protein 2760779..2761186 Mycobacterium vanbaalenii PYR-1 4643882 YP_953426.1 CDS Mvan_2612 NC_008726.1 2761183 2762349 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_5294 putative RNA polymerase, sigma-24 subunit, ECF subfamily; RNA polymerase ECF-subfamily sigma factor 2761183..2762349 Mycobacterium vanbaalenii PYR-1 4643883 YP_953427.1 CDS Mvan_2613 NC_008726.1 2762589 2762888 D KEGG: mmc:Mmcs_5106 hypothetical protein; hypothetical protein 2762589..2762888 Mycobacterium vanbaalenii PYR-1 4643884 YP_953428.1 CDS Mvan_2614 NC_008726.1 2763000 2763587 R KEGG: mmc:Mmcs_2306 hypothetical protein; hypothetical protein complement(2763000..2763587) Mycobacterium vanbaalenii PYR-1 4643384 YP_953429.1 CDS aspS NC_008726.1 2763600 2765405 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2763600..2765405 Mycobacterium vanbaalenii PYR-1 4643385 YP_953430.1 CDS Mvan_2616 NC_008726.1 2765402 2765851 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_2315 hypothetical protein; hypothetical protein 2765402..2765851 Mycobacterium vanbaalenii PYR-1 4643386 YP_953431.1 CDS Mvan_2617 NC_008726.1 2765926 2767110 R KEGG: mmc:Mmcs_2317 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(2765926..2767110) Mycobacterium vanbaalenii PYR-1 4643387 YP_953432.1 CDS Mvan_2618 NC_008726.1 2767206 2767694 D PFAM: helix-turn-helix, HxlR type; KEGG: mpa:MAP3336c hypothetical protein; HxlR family transcriptional regulator 2767206..2767694 Mycobacterium vanbaalenii PYR-1 4643388 YP_953433.1 CDS Mvan_2619 NC_008726.1 2767757 2768575 R PFAM: photosystem I assembly BtpA; KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA; photosystem I assembly BtpA complement(2767757..2768575) Mycobacterium vanbaalenii PYR-1 4643389 YP_953434.1 CDS Mvan_2620 NC_008726.1 2768625 2769395 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2421 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2768625..2769395) Mycobacterium vanbaalenii PYR-1 4643390 YP_953435.1 CDS Mvan_2621 NC_008726.1 2769425 2770486 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2417 ABC transporter related; ABC transporter--like protein complement(2769425..2770486) Mycobacterium vanbaalenii PYR-1 4643391 YP_953436.1 CDS Mvan_2622 NC_008726.1 2770509 2771324 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2418 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2770509..2771324) Mycobacterium vanbaalenii PYR-1 4643392 YP_953437.1 CDS Mvan_2623 NC_008726.1 2771321 2772184 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2419 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2771321..2772184) Mycobacterium vanbaalenii PYR-1 4643393 YP_953438.1 CDS Mvan_2624 NC_008726.1 2772249 2773583 R PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2420 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2772249..2773583) Mycobacterium vanbaalenii PYR-1 4643394 YP_953439.1 CDS Mvan_2625 NC_008726.1 2773609 2775126 R PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2422 carbohydrate kinase, FGGY; carbohydrate kinase complement(2773609..2775126) Mycobacterium vanbaalenii PYR-1 4643395 YP_953440.1 CDS Mvan_2626 NC_008726.1 2775123 2775944 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_2425 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(2775123..2775944) Mycobacterium vanbaalenii PYR-1 4643396 YP_953441.1 CDS Mvan_2627 NC_008726.1 2776100 2777029 D PFAM: conserved hypothetical protein 341; KEGG: mmc:Mmcs_2319 conserved hypothetical protein 341; hypothetical protein 2776100..2777029 Mycobacterium vanbaalenii PYR-1 4643397 YP_953442.1 CDS Mvan_2628 NC_008726.1 2777073 2780411 D PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mmc:Mmcs_2320 transglutaminase-like protein; transglutaminase domain-containing protein 2777073..2780411 Mycobacterium vanbaalenii PYR-1 4643398 YP_953443.1 CDS Mvan_2629 NC_008726.1 2780411 2783044 D PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mmc:Mmcs_2321 protein of unknown function DUF404; hypothetical protein 2780411..2783044 Mycobacterium vanbaalenii PYR-1 4643399 YP_953444.1 CDS Mvan_2630 NC_008726.1 2783041 2783973 D PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mmc:Mmcs_2322 transglutaminase-like protein; transglutaminase domain-containing protein 2783041..2783973 Mycobacterium vanbaalenii PYR-1 4643400 YP_953445.1 CDS Mvan_2631 NC_008726.1 2783966 2785057 D KEGG: mmc:Mmcs_2323 hypothetical protein; hypothetical protein 2783966..2785057 Mycobacterium vanbaalenii PYR-1 4643401 YP_953446.1 CDS Mvan_2632 NC_008726.1 2784981 2787641 R PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; KEGG: bld:BLi02241 close homolog to Pps phosphoenolpyruvate synthase; RBL01875; pyruvate, water dikinase complement(2784981..2787641) Mycobacterium vanbaalenii PYR-1 4643402 YP_953447.1 CDS Mvan_2633 NC_008726.1 2787692 2788522 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0294 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2787692..2788522) Mycobacterium vanbaalenii PYR-1 4643403 YP_953448.1 CDS Mvan_2634 NC_008726.1 2788534 2789412 D KEGG: mmc:Mmcs_2324 hypothetical protein; hypothetical protein 2788534..2789412 Mycobacterium vanbaalenii PYR-1 4643404 YP_953449.1 CDS Mvan_2635 NC_008726.1 2789461 2790750 D PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mmc:Mmcs_2325 AAA ATPase, central region; recombination factor protein RarA 2789461..2790750 Mycobacterium vanbaalenii PYR-1 4643405 YP_953450.1 CDS Mvan_2636 NC_008726.1 2790877 2791239 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2326 transcriptional regulator, ArsR family; regulatory protein ArsR 2790877..2791239 Mycobacterium vanbaalenii PYR-1 4643406 YP_953451.1 CDS Mvan_2637 NC_008726.1 2791236 2791715 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mmc:Mmcs_2327 activator of HSP90 ATPase 1-like protein; activator of Hsp90 ATPase 1 family protein 2791236..2791715 Mycobacterium vanbaalenii PYR-1 4643407 YP_953452.1 CDS Mvan_2638 NC_008726.1 2791793 2792098 R KEGG: mmc:Mmcs_2343 putative transglycosylase associated protein; putative transglycosylase associated protein complement(2791793..2792098) Mycobacterium vanbaalenii PYR-1 4643408 YP_953453.1 CDS Mvan_2639 NC_008726.1 2792217 2792606 D PFAM: protein of unknown function UPF0047; KEGG: mmc:Mmcs_2345 protein of unknown function UPF0047; hypothetical protein 2792217..2792606 Mycobacterium vanbaalenii PYR-1 4643409 YP_953454.1 CDS alaS NC_008726.1 2792681 2795377 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2792681..2795377 Mycobacterium vanbaalenii PYR-1 4643983 YP_953455.1 CDS Mvan_2641 NC_008726.1 2795382 2795909 D PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; KEGG: mmc:Mmcs_2347 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 2795382..2795909 Mycobacterium vanbaalenii PYR-1 4643984 YP_953456.1 CDS Mvan_2642 NC_008726.1 2795902 2797149 D PFAM: aminodeoxychorismate lyase; KEGG: mmc:Mmcs_2348 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2795902..2797149 Mycobacterium vanbaalenii PYR-1 4643985 YP_953457.1 CDS aroE NC_008726.1 2797178 2797993 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2797178..2797993 Mycobacterium vanbaalenii PYR-1 4643986 YP_953458.1 CDS Mvan_2644 NC_008726.1 2798003 2798455 D PFAM: peptidase A24A, prepilin type IV; KEGG: mmc:Mmcs_2350 peptidase A24A, prepilin type IV; peptidase A24A, prepilin type IV 2798003..2798455 Mycobacterium vanbaalenii PYR-1 4643987 YP_953459.1 CDS Mvan_2645 NC_008726.1 2798539 2799762 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2798539..2799762 Mycobacterium vanbaalenii PYR-1 4643988 YP_953460.1 CDS aroK NC_008726.1 2799762 2800424 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2799762..2800424 Mycobacterium vanbaalenii PYR-1 4643989 YP_953461.1 CDS aroB NC_008726.1 2800421 2801500 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2800421..2801500 Mycobacterium vanbaalenii PYR-1 4643990 YP_953462.1 CDS Mvan_2648 NC_008726.1 2801497 2802375 R KEGG: mmc:Mmcs_3425 hypothetical protein; hypothetical protein complement(2801497..2802375) Mycobacterium vanbaalenii PYR-1 4643991 YP_953463.1 CDS Mvan_2649 NC_008726.1 2802385 2802993 R KEGG: mmc:Mmcs_2356 hypothetical protein; hypothetical protein complement(2802385..2802993) Mycobacterium vanbaalenii PYR-1 4643992 YP_953464.1 CDS Mvan_2650 NC_008726.1 2803027 2804109 D PFAM: peptidase M24; KEGG: mmc:Mmcs_2357 peptidase M24; peptidase M24 2803027..2804109 Mycobacterium vanbaalenii PYR-1 4643993 YP_953465.1 CDS Mvan_2651 NC_008726.1 2804130 2804693 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2804130..2804693 Mycobacterium vanbaalenii PYR-1 4643994 YP_953466.1 CDS nusB NC_008726.1 2804686 2805177 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2804686..2805177 Mycobacterium vanbaalenii PYR-1 4643995 YP_953467.1 CDS Mvan_2653 NC_008726.1 2805178 2805723 D hypothetical protein 2805178..2805723 Mycobacterium vanbaalenii PYR-1 4643996 YP_953468.1 CDS Mvan_2654 NC_008726.1 2805815 2806618 D PFAM: HpcH/HpaI aldolase; KEGG: mbo:Mb3102c hypothetical protein; HpcH/HpaI aldolase 2805815..2806618 Mycobacterium vanbaalenii PYR-1 4643997 YP_953469.1 CDS Mvan_2656 NC_008726.1 2807053 2808408 D PFAM: transposase, mutator type; KEGG: cjk:jk1787 transposase for IS3508i; transposase, mutator type 2807053..2808408 Mycobacterium vanbaalenii PYR-1 4643999 YP_953470.1 CDS Mvan_2657 NC_008726.1 2808440 2809462 R KEGG: mmc:Mmcs_4699 hypothetical protein; hypothetical protein complement(2808440..2809462) Mycobacterium vanbaalenii PYR-1 4644000 YP_953471.1 CDS Mvan_2658 NC_008726.1 2809500 2810705 R PFAM: beta-lactamase; KEGG: mmc:Mmcs_2361 beta-lactamase; beta-lactamase complement(2809500..2810705) Mycobacterium vanbaalenii PYR-1 4644001 YP_953472.1 CDS Mvan_2659 NC_008726.1 2810857 2811438 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 2810857..2811438 Mycobacterium vanbaalenii PYR-1 4644002 YP_953473.1 CDS pyrB NC_008726.1 2811435 2812382 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2811435..2812382 Mycobacterium vanbaalenii PYR-1 4644003 YP_953474.1 CDS pyrC NC_008726.1 2812379 2813707 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2812379..2813707 Mycobacterium vanbaalenii PYR-1 4644004 YP_953475.1 CDS Mvan_2662 NC_008726.1 2813704 2814207 D KEGG: mmc:Mmcs_2365 putative export or membrane protein; putative export or membrane protein 2813704..2814207 Mycobacterium vanbaalenii PYR-1 4644005 YP_953476.1 CDS Mvan_2663 NC_008726.1 2814204 2815334 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2814204..2815334 Mycobacterium vanbaalenii PYR-1 4644006 YP_953477.1 CDS carB NC_008726.1 2815463 2818801 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2815463..2818801 Mycobacterium vanbaalenii PYR-1 4644007 YP_953478.1 CDS pyrF NC_008726.1 2818804 2819637 D type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2818804..2819637 Mycobacterium vanbaalenii PYR-1 4643584 YP_953479.1 CDS Mvan_2666 NC_008726.1 2820020 2820337 D KEGG: mmc:Mmcs_2369 MihF; protein MihF 2820020..2820337 Mycobacterium vanbaalenii PYR-1 4643585 YP_953480.1 CDS gmk NC_008726.1 2820348 2820959 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2820348..2820959 Mycobacterium vanbaalenii PYR-1 4643586 YP_953481.1 CDS Mvan_2668 NC_008726.1 2821016 2821330 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2821016..2821330 Mycobacterium vanbaalenii PYR-1 4643587 YP_953482.1 CDS Mvan_2669 NC_008726.1 2821348 2822592 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2821348..2822592 Mycobacterium vanbaalenii PYR-1 4643588 YP_953483.1 CDS Mvan_2670 NC_008726.1 2822715 2823923 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2822715..2823923 Mycobacterium vanbaalenii PYR-1 4643589 YP_953484.1 CDS Mvan_2671 NC_008726.1 2823920 2825416 R KEGG: mmc:Mmcs_2374 cyclohexanone monooxygenase; cyclohexanone monooxygenase complement(2823920..2825416) Mycobacterium vanbaalenii PYR-1 4643590 YP_953485.1 CDS Mvan_2672 NC_008726.1 2825482 2826411 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpa:MAP1128c LipI; alpha/beta hydrolase domain-containing protein complement(2825482..2826411) Mycobacterium vanbaalenii PYR-1 4643591 YP_953486.1 CDS Mvan_2673 NC_008726.1 2826506 2827369 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pca:Pcar_2191 hypothetical protein; xylose isomerase domain-containing protein 2826506..2827369 Mycobacterium vanbaalenii PYR-1 4643592 YP_953487.1 CDS Mvan_2674 NC_008726.1 2827401 2828435 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rha:RHA1_ro01165 possible transmembrane protein; endonuclease/exonuclease/phosphatase 2827401..2828435 Mycobacterium vanbaalenii PYR-1 4643593 YP_953488.1 CDS Mvan_2675 NC_008726.1 2828426 2832319 R PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: fra:Francci3_1178 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2828426..2832319) Mycobacterium vanbaalenii PYR-1 4643594 YP_953489.1 CDS Mvan_2676 NC_008726.1 2832565 2833413 D PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_3852 glycosyl transferase, family 2; glycosyl transferase family protein 2832565..2833413 Mycobacterium vanbaalenii PYR-1 4643595 YP_953490.1 CDS Mvan_2677 NC_008726.1 2833410 2834363 D PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1580 glycosyl transferase, family 2; glycosyl transferase family protein 2833410..2834363 Mycobacterium vanbaalenii PYR-1 4643596 YP_953491.1 CDS Mvan_2678 NC_008726.1 2834368 2835024 D hypothetical protein 2834368..2835024 Mycobacterium vanbaalenii PYR-1 4643597 YP_953492.1 CDS Mvan_2679 NC_008726.1 2835069 2835851 D PFAM: glycoside hydrolase, family 16; KEGG: sco:SCO7575 putative secreted hydrolase; glycoside hydrolase family protein 2835069..2835851 Mycobacterium vanbaalenii PYR-1 4643598 YP_953493.1 CDS Mvan_2680 NC_008726.1 2835848 2837128 D PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1586 glycosyl transferase, family 2; glycosyl transferase family protein 2835848..2837128 Mycobacterium vanbaalenii PYR-1 4643599 YP_953494.1 CDS Mvan_2681 NC_008726.1 2837125 2839332 D KEGG: rha:RHA1_ro05770 hypothetical protein; hypothetical protein 2837125..2839332 Mycobacterium vanbaalenii PYR-1 4643600 YP_953495.1 CDS Mvan_2682 NC_008726.1 2839339 2840601 R hypothetical protein complement(2839339..2840601) Mycobacterium vanbaalenii PYR-1 4643601 YP_953496.1 CDS Mvan_2683 NC_008726.1 2840702 2841436 D PFAM: YhhN family protein; KEGG: mmc:Mmcs_2378 YhhN-like protein; YhhN family protein 2840702..2841436 Mycobacterium vanbaalenii PYR-1 4643602 YP_953497.1 CDS Mvan_2684 NC_008726.1 2841433 2843433 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2841433..2843433 Mycobacterium vanbaalenii PYR-1 4643603 YP_953498.1 CDS Mvan_2685 NC_008726.1 2843439 2845262 D KEGG: mmc:Mmcs_2381 hypothetical protein; hypothetical protein 2843439..2845262 Mycobacterium vanbaalenii PYR-1 4643604 YP_953499.1 CDS Mvan_2686 NC_008726.1 2845259 2845792 D PFAM: LemA family protein; KEGG: mmc:Mmcs_2382 LemA; LemA family protein 2845259..2845792 Mycobacterium vanbaalenii PYR-1 4643605 YP_953500.1 CDS fmt NC_008726.1 2845812 2846744 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 2845812..2846744 Mycobacterium vanbaalenii PYR-1 4643606 YP_953501.1 CDS Mvan_2688 NC_008726.1 2846741 2848090 D PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: mmc:Mmcs_2384 Fmu (Sun); Fmu (Sun) domain-containing protein 2846741..2848090 Mycobacterium vanbaalenii PYR-1 4643607 YP_953502.1 CDS Mvan_2689 NC_008726.1 2848111 2848815 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 2848111..2848815 Mycobacterium vanbaalenii PYR-1 4643608 YP_953503.1 CDS Mvan_2690 NC_008726.1 2848812 2849813 D KEGG: mmc:Mmcs_2386 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 2848812..2849813 Mycobacterium vanbaalenii PYR-1 4645445 YP_953504.1 CDS Mvan_2691 NC_008726.1 2850066 2851652 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2387 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(2850066..2851652) Mycobacterium vanbaalenii PYR-1 4645446 YP_953505.1 CDS Mvan_2692 NC_008726.1 2851652 2852356 R PFAM: protein of unknown function DUF1396; KEGG: mmc:Mmcs_2388 protein of unknown function DUF1396; hypothetical protein complement(2851652..2852356) Mycobacterium vanbaalenii PYR-1 4645447 YP_953506.1 CDS Mvan_2693 NC_008726.1 2852521 2853138 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2852521..2853138 Mycobacterium vanbaalenii PYR-1 4645448 YP_953507.1 CDS Mvan_2694 NC_008726.1 2853240 2854511 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 2853240..2854511 Mycobacterium vanbaalenii PYR-1 4645449 YP_953508.1 CDS ribH NC_008726.1 2854508 2854981 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2854508..2854981 Mycobacterium vanbaalenii PYR-1 4645450 YP_953509.1 CDS Mvan_2696 NC_008726.1 2854978 2855442 D KEGG: mmc:Mmcs_2392 hypothetical protein; hypothetical protein 2854978..2855442 Mycobacterium vanbaalenii PYR-1 4645451 YP_953510.1 CDS uvrC NC_008726.1 2855478 2857514 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2855478..2857514 Mycobacterium vanbaalenii PYR-1 4645452 YP_953511.1 CDS Mvan_2698 NC_008726.1 2857511 2858470 D PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: mmc:Mmcs_2396 uncharacterised P-loop ATPase protein UPF0042; hypothetical protein 2857511..2858470 Mycobacterium vanbaalenii PYR-1 4645453 YP_953512.1 CDS Mvan_2699 NC_008726.1 2858525 2859559 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_2397 hypothetical protein; hypothetical protein 2858525..2859559 Mycobacterium vanbaalenii PYR-1 4645454 YP_953513.1 CDS Mvan_2700 NC_008726.1 2859556 2860533 D PFAM: protein of unknown function DUF199; KEGG: mmc:Mmcs_2398 protein of unknown function DUF199; hypothetical protein 2859556..2860533 Mycobacterium vanbaalenii PYR-1 4645455 YP_953514.1 CDS Mvan_2701 NC_008726.1 2860538 2862259 R PFAM: lipase, class 2; KEGG: sco:SCO1735 secreted lipase; lipase, class 2 complement(2860538..2862259) Mycobacterium vanbaalenii PYR-1 4645456 YP_953515.1 CDS Mvan_2702 NC_008726.1 2862375 2863088 D PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: mmc:Mmcs_2403 extracellular solute-binding protein, family 3; extracellular solute-binding protein 2862375..2863088 Mycobacterium vanbaalenii PYR-1 4645457 YP_953516.1 CDS Mvan_2703 NC_008726.1 2863161 2864207 D KEGG: mmc:Mmcs_2404 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2863161..2864207 Mycobacterium vanbaalenii PYR-1 4645458 YP_953517.1 CDS pgk NC_008726.1 2864213 2865436 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2864213..2865436 Mycobacterium vanbaalenii PYR-1 4645459 YP_953518.1 CDS tpiA NC_008726.1 2865466 2866251 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2865466..2866251 Mycobacterium vanbaalenii PYR-1 4645460 YP_953519.1 CDS secG NC_008726.1 2866282 2866515 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mpa:MAP1167 protein-export membrane protein SecG; preprotein translocase subunit SecG 2866282..2866515 Mycobacterium vanbaalenii PYR-1 4645461 YP_953520.1 CDS Mvan_2707 NC_008726.1 2866579 2869389 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2866579..2869389 Mycobacterium vanbaalenii PYR-1 4645462 YP_953521.1 CDS Mvan_2708 NC_008726.1 2869490 2869861 R KEGG: mmc:Mmcs_2409 hypothetical protein; hypothetical protein complement(2869490..2869861) Mycobacterium vanbaalenii PYR-1 4645463 YP_953522.1 CDS Mvan_2709 NC_008726.1 2869909 2870655 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mmc:Mmcs_4385 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 2869909..2870655 Mycobacterium vanbaalenii PYR-1 4645464 YP_953523.1 CDS Mvan_2710 NC_008726.1 2870652 2872112 D TIGRFAM: iron-sulfur cluster binding protein; KEGG: mmc:Mmcs_4386 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 2870652..2872112 Mycobacterium vanbaalenii PYR-1 4645465 YP_953524.1 CDS Mvan_2711 NC_008726.1 2872105 2872725 D PFAM: protein of unknown function DUF162; KEGG: sma:SAV7410 hypothetical protein; hypothetical protein 2872105..2872725 Mycobacterium vanbaalenii PYR-1 4645466 YP_953525.1 CDS Mvan_2712 NC_008726.1 2872774 2873463 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rha:RHA1_ro07106 possible esterase; alpha/beta hydrolase domain-containing protein 2872774..2873463 Mycobacterium vanbaalenii PYR-1 4645467 YP_953526.1 CDS Mvan_2713 NC_008726.1 2873531 2873833 D hypothetical protein 2873531..2873833 Mycobacterium vanbaalenii PYR-1 4645468 YP_953527.1 CDS Mvan_2714 NC_008726.1 2874000 2875805 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein complement(2874000..2875805) Mycobacterium vanbaalenii PYR-1 4645469 YP_953528.1 CDS Mvan_2715 NC_008726.1 2876080 2876478 D KEGG: mmc:Mmcs_4605 hypothetical protein; hypothetical protein 2876080..2876478 Mycobacterium vanbaalenii PYR-1 4648211 YP_953529.1 CDS Mvan_2716 NC_008726.1 2876446 2877180 R TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mmc:Mmcs_2410 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(2876446..2877180) Mycobacterium vanbaalenii PYR-1 4648212 YP_953530.1 CDS Mvan_2717 NC_008726.1 2877177 2878088 R TIGRFAM: OpcA protein; KEGG: mmc:Mmcs_2411 OpcA protein; OpcA protein complement(2877177..2878088) Mycobacterium vanbaalenii PYR-1 4648213 YP_953531.1 CDS Mvan_2718 NC_008726.1 2878088 2879617 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(2878088..2879617) Mycobacterium vanbaalenii PYR-1 4648214 YP_953532.1 CDS Mvan_2719 NC_008726.1 2879628 2880746 R catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase complement(2879628..2880746) Mycobacterium vanbaalenii PYR-1 4648215 YP_953533.1 CDS Mvan_2720 NC_008726.1 2880769 2882862 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(2880769..2882862) Mycobacterium vanbaalenii PYR-1 4648216 YP_953534.1 CDS Mvan_2721 NC_008726.1 2883052 2883993 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 2883052..2883993 Mycobacterium vanbaalenii PYR-1 4648217 YP_953535.1 CDS Mvan_2722 NC_008726.1 2883996 2884952 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B5159 protein of unknown function DUF1214; hypothetical protein 2883996..2884952 Mycobacterium vanbaalenii PYR-1 4648218 YP_953536.1 CDS Mvan_2723 NC_008726.1 2885099 2886514 R KEGG: mmc:Mmcs_3462 hypothetical protein; hypothetical protein complement(2885099..2886514) Mycobacterium vanbaalenii PYR-1 4648219 YP_953537.1 CDS Mvan_2724 NC_008726.1 2886835 2887809 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2427 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase complement(2886835..2887809) Mycobacterium vanbaalenii PYR-1 4648220 YP_953538.1 CDS Mvan_2725 NC_008726.1 2887831 2888769 D KEGG: mmc:Mmcs_2428 hypothetical protein; hypothetical protein 2887831..2888769 Mycobacterium vanbaalenii PYR-1 4648221 YP_953539.1 CDS Mvan_2726 NC_008726.1 2888719 2889675 R PFAM: cytochrome oxidase assembly; KEGG: mmc:Mmcs_2429 cytochrome oxidase assembly; cytochrome oxidase assembly complement(2888719..2889675) Mycobacterium vanbaalenii PYR-1 4648222 YP_953540.1 CDS Mvan_2727 NC_008726.1 2889700 2890278 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2430 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2889700..2890278) Mycobacterium vanbaalenii PYR-1 4648223 YP_953541.1 CDS Mvan_2728 NC_008726.1 2890393 2891079 D KEGG: mmc:Mmcs_2431 hypothetical protein; hypothetical protein 2890393..2891079 Mycobacterium vanbaalenii PYR-1 4648224 YP_953542.1 CDS Mvan_2729 NC_008726.1 2890993 2891772 R TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2432 ABC transporter, DrrB efflux protein; multidrug ABC transporter inner membrane protein complement(2890993..2891772) Mycobacterium vanbaalenii PYR-1 4648225 YP_953543.1 CDS Mvan_2730 NC_008726.1 2891769 2892698 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2433 ABC transporter related; ABC transporter--like protein complement(2891769..2892698) Mycobacterium vanbaalenii PYR-1 4648226 YP_953544.1 CDS Mvan_2731 NC_008726.1 2892695 2894413 R KEGG: mmc:Mmcs_2434 hypothetical protein; hypothetical protein complement(2892695..2894413) Mycobacterium vanbaalenii PYR-1 4648227 YP_953545.1 CDS Mvan_2732 NC_008726.1 2894543 2895205 D PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: mbo:Mb1495 probable transcriptional regulatory protein; putative transcriptional regulator 2894543..2895205 Mycobacterium vanbaalenii PYR-1 4648228 YP_953546.1 CDS Mvan_2733 NC_008726.1 2895285 2896724 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mmc:Mmcs_2436 FeS assembly protein SufB; FeS assembly protein SufB 2895285..2896724 Mycobacterium vanbaalenii PYR-1 4648229 YP_953547.1 CDS Mvan_2734 NC_008726.1 2896724 2897923 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mpa:MAP1188 hypothetical protein; FeS assembly protein SufD 2896724..2897923 Mycobacterium vanbaalenii PYR-1 4648230 YP_953548.1 CDS Mvan_2735 NC_008726.1 2897923 2898693 D KEGG: nfa:nfa35580 putative ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 2897923..2898693 Mycobacterium vanbaalenii PYR-1 4648231 YP_953549.1 CDS Mvan_2736 NC_008726.1 2898695 2899942 D TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: mmc:Mmcs_2439 cysteine desulfurases, SufS subfamily; SufS subfamily cysteine desulfurase 2898695..2899942 Mycobacterium vanbaalenii PYR-1 4648232 YP_953550.1 CDS Mvan_2737 NC_008726.1 2899946 2900407 D TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: mmc:Mmcs_2440 SUF system FeS assembly protein; NifU family SUF system FeS assembly protein 2899946..2900407 Mycobacterium vanbaalenii PYR-1 4648233 YP_953551.1 CDS Mvan_2738 NC_008726.1 2900407 2900754 D PFAM: protein of unknown function DUF59; KEGG: mpa:MAP1192 hypothetical protein; hypothetical protein 2900407..2900754 Mycobacterium vanbaalenii PYR-1 4648234 YP_953552.1 CDS Mvan_2739 NC_008726.1 2901896 2902822 D PFAM: glycoside hydrolase, family 16; KEGG: pfu:PF0076 endo-beta-1,3-glucanase; glycoside hydrolase family protein 2901896..2902822 Mycobacterium vanbaalenii PYR-1 4648235 YP_953553.1 CDS Mvan_2740 NC_008726.1 2902860 2903222 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_2444 thioredoxin; thioredoxin 2902860..2903222 Mycobacterium vanbaalenii PYR-1 4646322 YP_953554.1 CDS Mvan_2741 NC_008726.1 2903238 2904068 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2903238..2904068 Mycobacterium vanbaalenii PYR-1 4646323 YP_953555.1 CDS Mvan_2742 NC_008726.1 2904123 2905814 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2446 ABC transporter related; ABC transporter--like protein 2904123..2905814 Mycobacterium vanbaalenii PYR-1 4646324 YP_953556.1 CDS Mvan_2743 NC_008726.1 2905832 2906095 D KEGG: mmc:Mmcs_2447 hypothetical protein; hypothetical protein 2905832..2906095 Mycobacterium vanbaalenii PYR-1 4646325 YP_953557.1 CDS Mvan_2744 NC_008726.1 2906097 2906660 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2448 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2906097..2906660) Mycobacterium vanbaalenii PYR-1 4646326 YP_953558.1 CDS Mvan_2745 NC_008726.1 2906665 2909529 R TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mmc:Mmcs_2449 aconitate hydratase 1; aconitate hydratase 1 complement(2906665..2909529) Mycobacterium vanbaalenii PYR-1 4646327 YP_953559.1 CDS Mvan_2746 NC_008726.1 2909711 2910322 D KEGG: mmc:Mmcs_2450 hypothetical protein; hypothetical protein 2909711..2910322 Mycobacterium vanbaalenii PYR-1 4646328 YP_953560.1 CDS Mvan_2747 NC_008726.1 2910541 2911977 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2451 NLP/P60; NLP/P60 protein 2910541..2911977 Mycobacterium vanbaalenii PYR-1 4646329 YP_953561.1 CDS Mvan_2748 NC_008726.1 2911974 2912666 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2452 NLP/P60; NLP/P60 protein 2911974..2912666 Mycobacterium vanbaalenii PYR-1 4646330 YP_953562.1 CDS Mvan_2749 NC_008726.1 2912808 2913965 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_2453 ATPase associated with various cellular activities, AAA_3; ATPase 2912808..2913965 Mycobacterium vanbaalenii PYR-1 4646331 YP_953563.1 CDS Mvan_2750 NC_008726.1 2914006 2914914 D KEGG: mmc:Mmcs_2454 hypothetical protein; hypothetical protein 2914006..2914914 Mycobacterium vanbaalenii PYR-1 4646332 YP_953564.1 CDS Mvan_2751 NC_008726.1 2914967 2915974 D PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2455 von Willebrand factor, type A; hypothetical protein 2914967..2915974 Mycobacterium vanbaalenii PYR-1 4646333 YP_953565.1 CDS Mvan_2752 NC_008726.1 2916060 2916827 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2456 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 2916060..2916827 Mycobacterium vanbaalenii PYR-1 4646334 YP_953566.1 CDS Mvan_2753 NC_008726.1 2916870 2917679 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2916870..2917679 Mycobacterium vanbaalenii PYR-1 4646335 YP_953567.1 CDS hemH NC_008726.1 2917689 2918708 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2917689..2918708 Mycobacterium vanbaalenii PYR-1 4646336 YP_953568.1 CDS Mvan_2755 NC_008726.1 2918731 2919192 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(2918731..2919192) Mycobacterium vanbaalenii PYR-1 4646337 YP_953569.1 CDS Mvan_2756 NC_008726.1 2919189 2920043 R PFAM: formate/nitrite transporter; KEGG: mmc:Mmcs_0716 formate/nitrite transporter; formate/nitrite transporter complement(2919189..2920043) Mycobacterium vanbaalenii PYR-1 4646338 YP_953570.1 CDS Mvan_2757 NC_008726.1 2920356 2921225 R KEGG: mmc:Mmcs_3128 hypothetical protein; hypothetical protein complement(2920356..2921225) Mycobacterium vanbaalenii PYR-1 4646339 YP_953571.1 CDS Mvan_2758 NC_008726.1 2921285 2921719 D PFAM: protein of unknown function DUF107; KEGG: mmc:Mmcs_3127 protein of unknown function DUF107; hypothetical protein 2921285..2921719 Mycobacterium vanbaalenii PYR-1 4646340 YP_953572.1 CDS Mvan_2759 NC_008726.1 2921744 2922964 D PFAM: band 7 protein; KEGG: mmc:Mmcs_3126 band 7 protein; hypothetical protein 2921744..2922964 Mycobacterium vanbaalenii PYR-1 4646341 YP_953573.1 CDS Mvan_2760 NC_008726.1 2922961 2923323 D KEGG: mmc:Mmcs_3125 hypothetical protein; hypothetical protein 2922961..2923323 Mycobacterium vanbaalenii PYR-1 4646342 YP_953574.1 CDS Mvan_2761 NC_008726.1 2923310 2924113 R KEGG: mmc:Mmcs_3124 hypothetical protein; hypothetical protein complement(2923310..2924113) Mycobacterium vanbaalenii PYR-1 4646343 YP_953575.1 CDS Mvan_2762 NC_008726.1 2924122 2926002 D KEGG: mmc:Mmcs_3123 methylmalonyl-CoA mutase, small subunit; TIGRFAM: methylmalonyl-CoA mutase, beta subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase subunit beta 2924122..2926002 Mycobacterium vanbaalenii PYR-1 4646344 YP_953576.1 CDS Mvan_2763 NC_008726.1 2926004 2928259 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2926004..2928259 Mycobacterium vanbaalenii PYR-1 4646345 YP_953577.1 CDS Mvan_2764 NC_008726.1 2928260 2929255 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2928260..2929255 Mycobacterium vanbaalenii PYR-1 4646346 YP_953578.1 CDS Mvan_2765 NC_008726.1 2929307 2930599 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_3120 beta-lactamase; beta-lactamase 2929307..2930599 Mycobacterium vanbaalenii PYR-1 4645294 YP_953579.1 CDS Mvan_2766 NC_008726.1 2930621 2931217 R KEGG: mmc:Mmcs_3103 hypothetical protein; hypothetical protein complement(2930621..2931217) Mycobacterium vanbaalenii PYR-1 4645295 YP_953580.1 CDS Mvan_2767 NC_008726.1 2931250 2931468 R KEGG: mmc:Mmcs_3102 hypothetical protein; hypothetical protein complement(2931250..2931468) Mycobacterium vanbaalenii PYR-1 4645296 YP_953581.1 CDS Mvan_2768 NC_008726.1 2931605 2932210 D KEGG: mmc:Mmcs_3101 hypothetical protein; hypothetical protein 2931605..2932210 Mycobacterium vanbaalenii PYR-1 4645297 YP_953582.1 CDS ileS NC_008726.1 2932460 2935708 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 2932460..2935708 Mycobacterium vanbaalenii PYR-1 4645298 YP_953583.1 CDS Mvan_2770 NC_008726.1 2935771 2936007 R PFAM: RNA-binding S4 domain protein; KEGG: mmc:Mmcs_3096 RNA-binding S4; RNA-binding S4 domain-containing protein complement(2935771..2936007) Mycobacterium vanbaalenii PYR-1 4645299 YP_953584.1 CDS Mvan_2771 NC_008726.1 2936016 2937377 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2936016..2937377 Mycobacterium vanbaalenii PYR-1 4645300 YP_953585.1 CDS Mvan_2772 NC_008726.1 2937386 2938285 R PFAM: Asparaginase/glutaminase; KEGG: mle:ML1198 L-asparaginase/L-glutaminase; asparaginase/glutaminase complement(2937386..2938285) Mycobacterium vanbaalenii PYR-1 4645301 YP_953586.1 CDS lspA NC_008726.1 2938328 2939032 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2938328..2939032 Mycobacterium vanbaalenii PYR-1 4645302 YP_953587.1 CDS Mvan_2774 NC_008726.1 2939029 2939958 D KEGG: mmc:Mmcs_3092 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 2939029..2939958 Mycobacterium vanbaalenii PYR-1 4645303 YP_953588.1 CDS Mvan_2775 NC_008726.1 2939955 2940845 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_3091 RarD protein; transporter DMT superfamily protein 2939955..2940845 Mycobacterium vanbaalenii PYR-1 4645304 YP_953589.1 CDS Mvan_2776 NC_008726.1 2940920 2941561 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3088 transcriptional regulator, TetR family; TetR family transcriptional regulator 2940920..2941561 Mycobacterium vanbaalenii PYR-1 4645305 YP_953590.1 CDS dnaE NC_008726.1 2941633 2945181 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 2941633..2945181 Mycobacterium vanbaalenii PYR-1 4645306 YP_953591.1 CDS Mvan_2778 NC_008726.1 2945178 2946374 D PFAM: major facilitator superfamily MFS_1; KEGG: fra:Francci3_2321 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2945178..2946374 Mycobacterium vanbaalenii PYR-1 4645307 YP_953592.1 CDS Mvan_2779 NC_008726.1 2946459 2947292 D hypothetical protein 2946459..2947292 Mycobacterium vanbaalenii PYR-1 4645308 YP_953593.1 CDS Mvan_2780 NC_008726.1 2947292 2947792 D KEGG: nmu:Nmul_A1819 hypothetical protein; hypothetical protein 2947292..2947792 Mycobacterium vanbaalenii PYR-1 4645309 YP_953594.1 CDS Mvan_2781 NC_008726.1 2947802 2948632 D KEGG: nmu:Nmul_A1820 hypothetical protein; hypothetical protein 2947802..2948632 Mycobacterium vanbaalenii PYR-1 4645310 YP_953595.1 CDS Mvan_2782 NC_008726.1 2948654 2948905 R KEGG: mmc:Mmcs_3085 hypothetical protein; hypothetical protein complement(2948654..2948905) Mycobacterium vanbaalenii PYR-1 4645311 YP_953596.1 CDS Mvan_2783 NC_008726.1 2949066 2950355 D catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2949066..2950355 Mycobacterium vanbaalenii PYR-1 4645312 YP_953597.1 CDS Mvan_2784 NC_008726.1 2950723 2952453 R KEGG: mmc:Mmcs_3082 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose trehalohydrolase complement(2950723..2952453) Mycobacterium vanbaalenii PYR-1 4645313 YP_953598.1 CDS Mvan_2785 NC_008726.1 2952446 2954737 R KEGG: mmc:Mmcs_3081 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose synthase complement(2952446..2954737) Mycobacterium vanbaalenii PYR-1 4645314 YP_953599.1 CDS Mvan_2786 NC_008726.1 2954740 2956884 R KEGG: mmc:Mmcs_3080 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(2954740..2956884) Mycobacterium vanbaalenii PYR-1 4645315 YP_953600.1 CDS Mvan_2787 NC_008726.1 2956884 2959079 R PFAM: acyltransferase 3; KEGG: mmc:Mmcs_3079 acyltransferase 3; acyltransferase 3 complement(2956884..2959079) Mycobacterium vanbaalenii PYR-1 4645316 YP_953601.1 CDS Mvan_2788 NC_008726.1 2959103 2960404 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2959103..2960404 Mycobacterium vanbaalenii PYR-1 4645317 YP_953602.1 CDS Mvan_2789 NC_008726.1 2960509 2961651 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2960509..2961651 Mycobacterium vanbaalenii PYR-1 4645318 YP_953603.1 CDS bioD NC_008726.1 2961648 2962328 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2961648..2962328 Mycobacterium vanbaalenii PYR-1 4645319 YP_953604.1 CDS Mvan_2791 NC_008726.1 2962328 2962849 D KEGG: mmc:Mmcs_3075 hypothetical protein; hypothetical protein 2962328..2962849 Mycobacterium vanbaalenii PYR-1 4646523 YP_953605.1 CDS Mvan_2792 NC_008726.1 2962859 2963431 R PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mmc:Mmcs_3074 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2962859..2963431) Mycobacterium vanbaalenii PYR-1 4646524 YP_953606.1 CDS Mvan_2793 NC_008726.1 2963507 2964502 D catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 2963507..2964502 Mycobacterium vanbaalenii PYR-1 4646525 YP_953607.1 CDS Mvan_2794 NC_008726.1 2964512 2964763 D KEGG: mpa:MAP1284 hypothetical protein; hypothetical protein 2964512..2964763 Mycobacterium vanbaalenii PYR-1 4646526 YP_953608.1 CDS Mvan_2795 NC_008726.1 2964760 2965416 D KEGG: mmc:Mmcs_3071 putative transmembrane protein; putative transmembrane protein 2964760..2965416 Mycobacterium vanbaalenii PYR-1 4646527 YP_953609.1 CDS Mvan_2796 NC_008726.1 2965352 2966704 R PFAM: secretory lipase; KEGG: mmc:Mmcs_3070 triacylglycerol lipase; triacylglycerol lipase complement(2965352..2966704) Mycobacterium vanbaalenii PYR-1 4646528 YP_953610.1 CDS Mvan_2797 NC_008726.1 2966747 2967451 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_3069 NUDIX hydrolase; NUDIX hydrolase complement(2966747..2967451) Mycobacterium vanbaalenii PYR-1 4646529 YP_953611.1 CDS Mvan_2798 NC_008726.1 2967499 2968542 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2967499..2968542 Mycobacterium vanbaalenii PYR-1 4646530 YP_953612.1 CDS Mvan_2799 NC_008726.1 2968569 2970113 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2968569..2970113 Mycobacterium vanbaalenii PYR-1 4646531 YP_953613.1 CDS Mvan_2800 NC_008726.1 2970110 2970967 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2970110..2970967 Mycobacterium vanbaalenii PYR-1 4646532 YP_953614.1 CDS Mvan_2801 NC_008726.1 2970971 2971417 D KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein; putative alanine and proline rich membrane protein 2970971..2971417 Mycobacterium vanbaalenii PYR-1 4646533 YP_953615.1 CDS Mvan_2802 NC_008726.1 2971421 2972059 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: transporter, LysE family; lysine exporter protein LysE/YggA complement(2971421..2972059) Mycobacterium vanbaalenii PYR-1 4646534 YP_953616.1 CDS Mvan_2803 NC_008726.1 2972083 2972451 R KEGG: mpa:MAP1292c hypothetical protein; hypothetical protein complement(2972083..2972451) Mycobacterium vanbaalenii PYR-1 4646535 YP_953617.1 CDS hisD NC_008726.1 2972542 2973897 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2972542..2973897 Mycobacterium vanbaalenii PYR-1 4646536 YP_953618.1 CDS Mvan_2805 NC_008726.1 2973894 2975015 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2973894..2975015 Mycobacterium vanbaalenii PYR-1 4646537 YP_953619.1 CDS hisB NC_008726.1 2975012 2975638 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2975012..2975638 Mycobacterium vanbaalenii PYR-1 4646538 YP_953620.1 CDS hisH NC_008726.1 2975635 2976255 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2975635..2976255 Mycobacterium vanbaalenii PYR-1 4646539 YP_953621.1 CDS Mvan_2808 NC_008726.1 2976252 2977019 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A 2976252..2977019 Mycobacterium vanbaalenii PYR-1 4646540 YP_953622.1 CDS Mvan_2809 NC_008726.1 2977016 2977834 D PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_3058 inositol monophosphatase; inositol-phosphate phosphatase 2977016..2977834 Mycobacterium vanbaalenii PYR-1 4646541 YP_953623.1 CDS Mvan_2810 NC_008726.1 2977831 2978616 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2977831..2978616 Mycobacterium vanbaalenii PYR-1 4646542 YP_953624.1 CDS hisI NC_008726.1 2978645 2978995 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 2978645..2978995 Mycobacterium vanbaalenii PYR-1 4646543 YP_953625.1 CDS Mvan_2812 NC_008726.1 2979064 2979858 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa24620 putative ABC transporter ATP-binding protein; ABC transporter--like protein complement(2979064..2979858) Mycobacterium vanbaalenii PYR-1 4646544 YP_953626.1 CDS Mvan_2813 NC_008726.1 2979855 2980301 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpa:MAP1302c bacterioferritin comigratory protein; redoxin domain-containing protein complement(2979855..2980301) Mycobacterium vanbaalenii PYR-1 4646545 YP_953627.1 CDS Mvan_2814 NC_008726.1 2980352 2981878 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2980352..2981878 Mycobacterium vanbaalenii PYR-1 4646546 YP_953628.1 CDS Mvan_2815 NC_008726.1 2981875 2982456 D TIGRFAM: trp region conserved hypothetical membrane protein; KEGG: mmc:Mmcs_3052 Trp region conserved hypothetical membrane protein; hypothetical protein 2981875..2982456 Mycobacterium vanbaalenii PYR-1 4646547 YP_953629.1 CDS trpC NC_008726.1 2982529 2983347 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2982529..2983347 Mycobacterium vanbaalenii PYR-1 4646473 YP_953630.1 CDS Mvan_2817 NC_008726.1 2983348 2984610 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2983348..2984610 Mycobacterium vanbaalenii PYR-1 4646474 YP_953631.1 CDS trpA NC_008726.1 2984607 2985395 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2984607..2985395 Mycobacterium vanbaalenii PYR-1 4646475 YP_953632.1 CDS Mvan_2819 NC_008726.1 2985392 2987854 D PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mmc:Mmcs_3048 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2985392..2987854 Mycobacterium vanbaalenii PYR-1 4646476 YP_953633.1 CDS Mvan_2820 NC_008726.1 2988659 2989090 D PFAM: TM2 domain containing protein+B7201; KEGG: mmc:Mmcs_3046 TM2 domain containing protein; TM2 domain-containing protein 2988659..2989090 Mycobacterium vanbaalenii PYR-1 4646477 YP_953634.1 CDS Mvan_2821 NC_008726.1 2989080 2989493 D KEGG: mmc:Mmcs_3045 hypothetical protein; hypothetical protein 2989080..2989493 Mycobacterium vanbaalenii PYR-1 4646478 YP_953635.1 CDS Mvan_2822 NC_008726.1 2989577 2994133 D PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mmc:Mmcs_3044 glutamate synthase (ferredoxin); glutamate synthase 2989577..2994133 Mycobacterium vanbaalenii PYR-1 4646479 YP_953636.1 CDS Mvan_2823 NC_008726.1 2994126 2995634 D TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3043 glutamate synthases, NADH/NADPH, small subunit; glutamate synthase NADH/NADPH small subunit 2994126..2995634 Mycobacterium vanbaalenii PYR-1 4646480 YP_953637.1 CDS Mvan_2824 NC_008726.1 2995662 2997080 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2995662..2997080 Mycobacterium vanbaalenii PYR-1 4646481 YP_953638.1 CDS Mvan_2825 NC_008726.1 2997104 2997985 D PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_3041 acyl-CoA thioesterase; acyl-CoA thioesterase 2997104..2997985 Mycobacterium vanbaalenii PYR-1 4646482 YP_953639.1 CDS Mvan_2826 NC_008726.1 2997969 2998487 R KEGG: mmc:Mmcs_3040 hypothetical protein; hypothetical protein complement(2997969..2998487) Mycobacterium vanbaalenii PYR-1 4646483 YP_953640.1 CDS Mvan_2827 NC_008726.1 2998484 2999962 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3039 ABC transporter related; ABC transporter--like protein complement(2998484..2999962) Mycobacterium vanbaalenii PYR-1 4646484 YP_953641.1 CDS Mvan_2828 NC_008726.1 2999949 3001511 R KEGG: mmc:Mmcs_3038 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter transmembrane protein complement(2999949..3001511) Mycobacterium vanbaalenii PYR-1 4646485 YP_953642.1 CDS Mvan_2829 NC_008726.1 3001565 3002605 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mmc:Mmcs_3037 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(3001565..3002605) Mycobacterium vanbaalenii PYR-1 4646486 YP_953643.1 CDS Mvan_2830 NC_008726.1 3002615 3004075 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: mmc:Mmcs_3036 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3002615..3004075) Mycobacterium vanbaalenii PYR-1 4646487 YP_953644.1 CDS Mvan_2831 NC_008726.1 3004158 3004751 R PFAM: protein of unknown function DUF308, membrane; KEGG: mpa:MAP1317c hypothetical protein; hypothetical protein complement(3004158..3004751) Mycobacterium vanbaalenii PYR-1 4646488 YP_953645.1 CDS Mvan_2832 NC_008726.1 3004938 3005858 D PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_3034 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3004938..3005858 Mycobacterium vanbaalenii PYR-1 4646489 YP_953646.1 CDS Mvan_2833 NC_008726.1 3005864 3006790 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3033 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3005864..3006790 Mycobacterium vanbaalenii PYR-1 4646490 YP_953647.1 CDS Mvan_2834 NC_008726.1 3006800 3007582 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3032 ABC transporter related; ABC transporter--like protein 3006800..3007582 Mycobacterium vanbaalenii PYR-1 4646491 YP_953648.1 CDS Mvan_2835 NC_008726.1 3007579 3008694 D PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_3031 putative signal transduction histidine kinase; putative signal transduction histidine kinase 3007579..3008694 Mycobacterium vanbaalenii PYR-1 4646492 YP_953649.1 CDS Mvan_2836 NC_008726.1 3008691 3009314 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_3030 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3008691..3009314 Mycobacterium vanbaalenii PYR-1 4646493 YP_953650.1 CDS Mvan_2837 NC_008726.1 3009359 3011203 D KEGG: mmc:Mmcs_3029 hypothetical protein; hypothetical protein 3009359..3011203 Mycobacterium vanbaalenii PYR-1 4646494 YP_953651.1 CDS Mvan_2838 NC_008726.1 3011253 3011756 D PFAM: Ferritin, Dps family protein; KEGG: mmc:Mmcs_3028 ferritin and Dps; Dps family ferritin 3011253..3011756 Mycobacterium vanbaalenii PYR-1 4646495 YP_953652.1 CDS Mvan_2839 NC_008726.1 3011731 3012996 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_3025 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase complement(3011731..3012996) Mycobacterium vanbaalenii PYR-1 4646496 YP_953653.1 CDS Mvan_2840 NC_008726.1 3013229 3013870 D PFAM: response regulator receiver; ANTAR domain protein; KEGG: mmc:Mmcs_3021 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 3013229..3013870 Mycobacterium vanbaalenii PYR-1 4643436 YP_953654.1 CDS Mvan_2841 NC_008726.1 3014080 3015291 D PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_3020 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3014080..3015291 Mycobacterium vanbaalenii PYR-1 4643437 YP_953655.1 CDS Mvan_2842 NC_008726.1 3015394 3016404 D PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_3019 inner-membrane translocator; inner-membrane translocator 3015394..3016404 Mycobacterium vanbaalenii PYR-1 4643438 YP_953656.1 CDS Mvan_2843 NC_008726.1 3016401 3017576 D PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_3018 inner-membrane translocator; inner-membrane translocator 3016401..3017576 Mycobacterium vanbaalenii PYR-1 4643439 YP_953657.1 CDS Mvan_2844 NC_008726.1 3017573 3018454 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3017 ABC transporter related; ABC transporter--like protein 3017573..3018454 Mycobacterium vanbaalenii PYR-1 4643440 YP_953658.1 CDS Mvan_2845 NC_008726.1 3018441 3019202 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3016 ABC transporter related; ABC transporter--like protein 3018441..3019202 Mycobacterium vanbaalenii PYR-1 4643441 YP_953659.1 CDS Mvan_2846 NC_008726.1 3019329 3019556 R PFAM: protein of unknown function DUF167; KEGG: mtc:MT2038 hypothetical protein; hypothetical protein complement(3019329..3019556) Mycobacterium vanbaalenii PYR-1 4643442 YP_953660.1 CDS Mvan_2847 NC_008726.1 3019652 3020101 R KEGG: mmc:Mmcs_0290 hypothetical protein; hypothetical protein complement(3019652..3020101) Mycobacterium vanbaalenii PYR-1 4643443 YP_953661.1 CDS Mvan_2848 NC_008726.1 3020146 3020976 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0292 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3020146..3020976) Mycobacterium vanbaalenii PYR-1 4643444 YP_953662.1 CDS Mvan_2849 NC_008726.1 3021187 3021999 D PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0757 putative ABC transport system permease protein; hypothetical protein 3021187..3021999 Mycobacterium vanbaalenii PYR-1 4643445 YP_953663.1 CDS Mvan_2850 NC_008726.1 3022005 3022853 D PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_0274 protein of unknown function DUF140; hypothetical protein 3022005..3022853 Mycobacterium vanbaalenii PYR-1 4643446 YP_953664.1 CDS Mvan_2851 NC_008726.1 3022868 3024061 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0275 mammalian cell entry; virulence factor Mce family protein 3022868..3024061 Mycobacterium vanbaalenii PYR-1 4643447 YP_953665.1 CDS Mvan_2852 NC_008726.1 3024067 3025089 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0276 mammalian cell entry; virulence factor Mce family protein 3024067..3025089 Mycobacterium vanbaalenii PYR-1 4643448 YP_953666.1 CDS Mvan_2853 NC_008726.1 3025089 3026171 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0277 mammalian cell entry; virulence factor Mce family protein 3025089..3026171 Mycobacterium vanbaalenii PYR-1 4643449 YP_953667.1 CDS Mvan_2854 NC_008726.1 3026168 3027643 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0278 mammalian cell entry; virulence factor Mce family protein 3026168..3027643 Mycobacterium vanbaalenii PYR-1 4643450 YP_953668.1 CDS Mvan_2855 NC_008726.1 3027640 3028839 D TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0279 mammalian cell entry; virulence factor Mce family protein 3027640..3028839 Mycobacterium vanbaalenii PYR-1 4643451 YP_953669.1 CDS Mvan_2857 NC_008726.1 3030379 3030894 R KEGG: mmc:Mmcs_0281 hypothetical protein; hypothetical protein complement(3030379..3030894) Mycobacterium vanbaalenii PYR-1 4643453 YP_953670.1 CDS Mvan_2858 NC_008726.1 3031052 3031414 D KEGG: mmc:Mmcs_0282 hypothetical protein; hypothetical protein 3031052..3031414 Mycobacterium vanbaalenii PYR-1 4643454 YP_953671.1 CDS Mvan_2859 NC_008726.1 3031404 3031820 D KEGG: mmc:Mmcs_0283 hypothetical protein; hypothetical protein 3031404..3031820 Mycobacterium vanbaalenii PYR-1 4643455 YP_953672.1 CDS Mvan_2860 NC_008726.1 3031938 3032615 D KEGG: mmc:Mmcs_0284 hypothetical protein; hypothetical protein 3031938..3032615 Mycobacterium vanbaalenii PYR-1 4643456 YP_953673.1 CDS Mvan_2861 NC_008726.1 3032612 3033148 D KEGG: mmc:Mmcs_0285 hypothetical protein; hypothetical protein 3032612..3033148 Mycobacterium vanbaalenii PYR-1 4643457 YP_953674.1 CDS Mvan_2862 NC_008726.1 3033457 3034656 R KEGG: mmc:Mmcs_3015 lipid-transfer protein; lipid-transfer protein complement(3033457..3034656) Mycobacterium vanbaalenii PYR-1 4643458 YP_953675.1 CDS Mvan_2863 NC_008726.1 3034653 3035171 R PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3014 protein of unknown function DUF35; hypothetical protein complement(3034653..3035171) Mycobacterium vanbaalenii PYR-1 4643459 YP_953676.1 CDS Mvan_2864 NC_008726.1 3035168 3035779 R PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_0286 thioesterase superfamily; thioesterase superfamily protein complement(3035168..3035779) Mycobacterium vanbaalenii PYR-1 4645644 YP_953677.1 CDS Mvan_2865 NC_008726.1 3035776 3037317 R catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase complement(3035776..3037317) Mycobacterium vanbaalenii PYR-1 4645645 YP_953678.1 CDS Mvan_2866 NC_008726.1 3037310 3037837 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: nfa:nfa40950 putative reductase; flavin reductase domain-containing protein complement(3037310..3037837) Mycobacterium vanbaalenii PYR-1 4645646 YP_953679.1 CDS Mvan_2867 NC_008726.1 3038005 3038652 D PFAM: transcriptional regulator PadR family protein; KEGG: mmc:Mmcs_0288 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 3038005..3038652 Mycobacterium vanbaalenii PYR-1 4645647 YP_953680.1 CDS Mvan_2868 NC_008726.1 3038665 3040341 R initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase complement(3038665..3040341) Mycobacterium vanbaalenii PYR-1 4645648 YP_953681.1 CDS Mvan_2869 NC_008726.1 3040477 3041634 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_0296 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 3040477..3041634 Mycobacterium vanbaalenii PYR-1 4645649 YP_953682.1 CDS Mvan_2870 NC_008726.1 3041631 3041912 D KEGG: nfa:nfa33570 hypothetical protein; hypothetical protein 3041631..3041912 Mycobacterium vanbaalenii PYR-1 4645650 YP_953683.1 CDS Mvan_2871 NC_008726.1 3041997 3043073 R KEGG: mmc:Mmcs_0300 hypothetical protein; hypothetical protein complement(3041997..3043073) Mycobacterium vanbaalenii PYR-1 4645651 YP_953684.1 CDS Mvan_2872 NC_008726.1 3043192 3044169 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0301 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein complement(3043192..3044169) Mycobacterium vanbaalenii PYR-1 4645652 YP_953685.1 CDS Mvan_2873 NC_008726.1 3044181 3045047 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0304 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3044181..3045047) Mycobacterium vanbaalenii PYR-1 4645653 YP_953686.1 CDS Mvan_2874 NC_008726.1 3045044 3045523 R KEGG: mmc:Mmcs_0305 hypothetical protein; hypothetical protein complement(3045044..3045523) Mycobacterium vanbaalenii PYR-1 4645654 YP_953687.1 CDS Mvan_2875 NC_008726.1 3045587 3046633 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0212 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(3045587..3046633) Mycobacterium vanbaalenii PYR-1 4645655 YP_953688.1 CDS Mvan_2876 NC_008726.1 3046630 3047781 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0213 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(3046630..3047781) Mycobacterium vanbaalenii PYR-1 4645656 YP_953689.1 CDS Mvan_2877 NC_008726.1 3047781 3048602 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_0306 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(3047781..3048602) Mycobacterium vanbaalenii PYR-1 4645657 YP_953690.1 CDS Mvan_2878 NC_008726.1 3048599 3050020 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0307 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase complement(3048599..3050020) Mycobacterium vanbaalenii PYR-1 4645658 YP_953691.1 CDS Mvan_2879 NC_008726.1 3050045 3051160 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_0308 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase complement(3050045..3051160) Mycobacterium vanbaalenii PYR-1 4645659 YP_953692.1 CDS Mvan_2880 NC_008726.1 3051414 3052001 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa42440 putative transcriptional regulator; TetR family transcriptional regulator 3051414..3052001 Mycobacterium vanbaalenii PYR-1 4645660 YP_953693.1 CDS Mvan_2881 NC_008726.1 3051998 3053230 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: nfa:nfa42430 putative NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 3051998..3053230 Mycobacterium vanbaalenii PYR-1 4645661 YP_953694.1 CDS Mvan_2882 NC_008726.1 3053189 3054862 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3053189..3054862) Mycobacterium vanbaalenii PYR-1 4645662 YP_953695.1 CDS Mvan_2883 NC_008726.1 3054892 3056814 D PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP1441 hypothetical protein; FAD dependent oxidoreductase 3054892..3056814 Mycobacterium vanbaalenii PYR-1 4645663 YP_953696.1 CDS Mvan_2884 NC_008726.1 3056811 3057698 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1442 hypothetical protein; short-chain dehydrogenase/reductase SDR 3056811..3057698 Mycobacterium vanbaalenii PYR-1 4645664 YP_953697.1 CDS Mvan_2885 NC_008726.1 3057711 3058340 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mpa:MAP1443c hypothetical protein; stress responsive alpha-beta barrel domain-containing protein complement(3057711..3058340) Mycobacterium vanbaalenii PYR-1 4645665 YP_953698.1 CDS Mvan_2886 NC_008726.1 3058333 3058680 R KEGG: mmc:Mmcs_0313 hypothetical protein; hypothetical protein complement(3058333..3058680) Mycobacterium vanbaalenii PYR-1 4645666 YP_953699.1 CDS Mvan_2887 NC_008726.1 3058781 3060016 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_0289 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3058781..3060016 Mycobacterium vanbaalenii PYR-1 4645667 YP_953700.1 CDS Mvan_2888 NC_008726.1 3060006 3060953 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpa:MAP1445c hypothetical protein; alpha/beta hydrolase domain-containing protein complement(3060006..3060953) Mycobacterium vanbaalenii PYR-1 4645668 YP_953701.1 CDS Mvan_2889 NC_008726.1 3060950 3061849 R PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_0315 transcriptional regulator, IclR family; regulatory proteins IclR complement(3060950..3061849) Mycobacterium vanbaalenii PYR-1 4645669 YP_953702.1 CDS Mvan_2890 NC_008726.1 3061968 3063428 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0316 fumarate reductase/succinate dehydrogenase flavoprotein-like protein; hypothetical protein complement(3061968..3063428) Mycobacterium vanbaalenii PYR-1 4649096 YP_953703.1 CDS Mvan_2891 NC_008726.1 3063425 3064333 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_0317 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3063425..3064333) Mycobacterium vanbaalenii PYR-1 4649097 YP_953704.1 CDS Mvan_2892 NC_008726.1 3064347 3065528 R PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mpa:MAP1448c hypothetical protein; acyl-CoA dehydrogenase type 2 complement(3064347..3065528) Mycobacterium vanbaalenii PYR-1 4649098 YP_953705.1 CDS Mvan_2893 NC_008726.1 3065610 3066653 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_0319 ferredoxin; ferredoxin complement(3065610..3066653) Mycobacterium vanbaalenii PYR-1 4649099 YP_953706.1 CDS Mvan_2894 NC_008726.1 3066773 3068383 D PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0320 FAD dependent oxidoreductase; cyclohexanone monooxygenase 3066773..3068383 Mycobacterium vanbaalenii PYR-1 4649100 YP_953707.1 CDS Mvan_2895 NC_008726.1 3068383 3069180 D PFAM: short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mmc:Mmcs_0321 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3068383..3069180 Mycobacterium vanbaalenii PYR-1 4649101 YP_953708.1 CDS Mvan_2896 NC_008726.1 3069183 3070022 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0322 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3069183..3070022 Mycobacterium vanbaalenii PYR-1 4649102 YP_953709.1 CDS Mvan_2897 NC_008726.1 3070036 3070908 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0326 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3070036..3070908 Mycobacterium vanbaalenii PYR-1 4649103 YP_953710.1 CDS Mvan_2898 NC_008726.1 3070889 3071764 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0323 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3070889..3071764) Mycobacterium vanbaalenii PYR-1 4649104 YP_953711.1 CDS Mvan_2899 NC_008726.1 3071911 3073203 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0325 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3071911..3073203 Mycobacterium vanbaalenii PYR-1 4649105 YP_953712.1 CDS Mvan_2900 NC_008726.1 3073224 3076235 R PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4841 MmpL; MMPL domain-containing protein complement(3073224..3076235) Mycobacterium vanbaalenii PYR-1 4649106 YP_953713.1 CDS Mvan_2901 NC_008726.1 3076354 3077010 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa25630 putative transcriptional regulator; TetR family transcriptional regulator 3076354..3077010 Mycobacterium vanbaalenii PYR-1 4649107 YP_953714.1 CDS Mvan_2902 NC_008726.1 3077054 3077830 D KEGG: nfa:nfa33480 hypothetical protein; hypothetical protein 3077054..3077830 Mycobacterium vanbaalenii PYR-1 4649108 YP_953715.1 CDS Mvan_2903 NC_008726.1 3077880 3079256 R PFAM: protein of unknown function UPF0089; KEGG: nfa:nfa55790 hypothetical protein; hypothetical protein complement(3077880..3079256) Mycobacterium vanbaalenii PYR-1 4649109 YP_953716.1 CDS Mvan_2904 NC_008726.1 3079639 3080619 D TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: nfa:nfa35300 putative transporter; phosphonate ABC transporter periplasmic phosphonate-binding protein 3079639..3080619 Mycobacterium vanbaalenii PYR-1 4649110 YP_953717.1 CDS Mvan_2905 NC_008726.1 3080637 3081458 D KEGG: nfa:nfa35290 putative ABC transporter ATP-binding protein; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 3080637..3081458 Mycobacterium vanbaalenii PYR-1 4649111 YP_953718.1 CDS Mvan_2906 NC_008726.1 3081518 3083053 D TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa35280 putative transporter; phosphonate ABC transporter inner membrane subunit 3081518..3083053 Mycobacterium vanbaalenii PYR-1 4649112 YP_953719.1 CDS Mvan_2907 NC_008726.1 3083050 3084042 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa35270 putative dehydrogenase; alcohol dehydrogenase 3083050..3084042 Mycobacterium vanbaalenii PYR-1 4649113 YP_953720.1 CDS Mvan_2908 NC_008726.1 3084655 3085188 D KEGG: mac:MA4214 benzodiazepine receptor TspO; hypothetical protein 3084655..3085188 Mycobacterium vanbaalenii PYR-1 4649114 YP_953721.1 CDS Mvan_2909 NC_008726.1 3085362 3086696 R hypothetical protein complement(3085362..3086696) Mycobacterium vanbaalenii PYR-1 4649115 YP_953722.1 CDS Mvan_2910 NC_008726.1 3086686 3088767 R hypothetical protein complement(3086686..3088767) Mycobacterium vanbaalenii PYR-1 4649116 YP_953723.1 CDS Mvan_2911 NC_008726.1 3088861 3089619 D PFAM: ribonuclease T2; KEGG: rru:Rru_A3450 ribonuclease T2; ribonuclease T2 3088861..3089619 Mycobacterium vanbaalenii PYR-1 4649117 YP_953724.1 CDS Mvan_2912 NC_008726.1 3089800 3090687 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0403 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3089800..3090687 Mycobacterium vanbaalenii PYR-1 4649118 YP_953725.1 CDS Mvan_2913 NC_008726.1 3090731 3091090 R KEGG: mbo:Mb0587c hypothetical protein; hypothetical protein complement(3090731..3091090) Mycobacterium vanbaalenii PYR-1 4649119 YP_953726.1 CDS Mvan_2914 NC_008726.1 3091312 3091695 D hypothetical protein 3091312..3091695 Mycobacterium vanbaalenii PYR-1 4649120 YP_953727.1 CDS Mvan_2915 NC_008726.1 3091711 3091932 D hypothetical protein 3091711..3091932 Mycobacterium vanbaalenii PYR-1 4645395 YP_953728.1 CDS Mvan_2916 NC_008726.1 3091970 3093424 R PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mmc:Mmcs_0230 Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, major region complement(3091970..3093424) Mycobacterium vanbaalenii PYR-1 4645396 YP_953729.1 CDS Mvan_2917 NC_008726.1 3093414 3094592 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_0231 amidohydrolase 2; amidohydrolase 2 complement(3093414..3094592) Mycobacterium vanbaalenii PYR-1 4645397 YP_953730.1 CDS Mvan_2918 NC_008726.1 3094579 3095886 R PFAM: aminotransferase class-III; KEGG: sme:SMc02413 putative aminotransferase protein; class III aminotransferase complement(3094579..3095886) Mycobacterium vanbaalenii PYR-1 4645398 YP_953731.1 CDS Mvan_2919 NC_008726.1 3095883 3097406 R PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_0232 amino acid permease-associated region; amino acid permease-associated protein complement(3095883..3097406) Mycobacterium vanbaalenii PYR-1 4645399 YP_953732.1 CDS Mvan_2920 NC_008726.1 3097427 3098755 R PFAM: glutamine synthetase, catalytic region; KEGG: mmc:Mmcs_0233 glutamine synthetase, catalytic region; glutamine synthetase complement(3097427..3098755) Mycobacterium vanbaalenii PYR-1 4645400 YP_953733.1 CDS Mvan_2921 NC_008726.1 3098884 3099678 D KEGG: mmc:Mmcs_0234 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II 3098884..3099678 Mycobacterium vanbaalenii PYR-1 4645401 YP_953734.1 CDS Mvan_2922 NC_008726.1 3099684 3100544 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: mmc:Mmcs_0235 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3099684..3100544 Mycobacterium vanbaalenii PYR-1 4645402 YP_953735.1 CDS Mvan_2923 NC_008726.1 3100673 3101974 D catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 3100673..3101974 Mycobacterium vanbaalenii PYR-1 4645403 YP_953736.1 CDS Mvan_2924 NC_008726.1 3102038 3102586 D KEGG: mmc:Mmcs_2592 hypothetical protein; hypothetical protein 3102038..3102586 Mycobacterium vanbaalenii PYR-1 4645404 YP_953737.1 CDS Mvan_2925 NC_008726.1 3103458 3104009 D PFAM: YaeQ family protein; KEGG: mmc:Mmcs_2602 YaeQ; YaeQ family protein 3103458..3104009 Mycobacterium vanbaalenii PYR-1 4645405 YP_953738.1 CDS Mvan_2926 NC_008726.1 3104028 3104291 R hypothetical protein complement(3104028..3104291) Mycobacterium vanbaalenii PYR-1 4645406 YP_953739.1 CDS Mvan_2927 NC_008726.1 3104442 3105257 R SMART: AAA ATPase; KEGG: mtc:MT2880 general secretion pathway protein A-related protein; ATPase AAA complement(3104442..3105257) Mycobacterium vanbaalenii PYR-1 4645407 YP_953740.1 CDS Mvan_2928 NC_008726.1 3105254 3106753 R PFAM: Integrase, catalytic region; KEGG: mtc:MT2879 IS1604, transposase; integrase catalytic subunit complement(3105254..3106753) Mycobacterium vanbaalenii PYR-1 4645408 YP_953741.1 CDS Mvan_2929 NC_008726.1 3106865 3107464 R KEGG: mbo:Mb2834 hypothetical protein; hypothetical protein complement(3106865..3107464) Mycobacterium vanbaalenii PYR-1 4645409 YP_953742.1 CDS Mvan_2930 NC_008726.1 3107782 3108114 R KEGG: rha:RHA1_ro08517 hypothetical protein; transcriptional modulator of MazE/toxin MazF complement(3107782..3108114) Mycobacterium vanbaalenii PYR-1 4645410 YP_953743.1 CDS Mvan_2931 NC_008726.1 3108111 3108278 R KEGG: lxx:Lxx04115 hypothetical protein; hypothetical protein complement(3108111..3108278) Mycobacterium vanbaalenii PYR-1 4645411 YP_953744.1 CDS Mvan_2932 NC_008726.1 3108637 3109317 R KEGG: sma:SAV2761 hypothetical protein; hypothetical protein complement(3108637..3109317) Mycobacterium vanbaalenii PYR-1 4645412 YP_953745.1 CDS Mvan_2933 NC_008726.1 3109333 3110298 D PFAM: protein of unknown function UPF0074; regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: nfa:nfa19320 putative transcriptional regulator; helix-turn-helix, type 11 domain-containing protein 3109333..3110298 Mycobacterium vanbaalenii PYR-1 4645413 YP_953746.1 CDS Mvan_2934 NC_008726.1 3110429 3111121 R PFAM: Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_2626 helix-turn-helix, type 11; helix-turn-helix, type 11 domain-containing protein complement(3110429..3111121) Mycobacterium vanbaalenii PYR-1 4645414 YP_953747.1 CDS Mvan_2935 NC_008726.1 3111143 3111697 R KEGG: mmc:Mmcs_2627 hypothetical protein; hypothetical protein complement(3111143..3111697) Mycobacterium vanbaalenii PYR-1 4645415 YP_953748.1 CDS Mvan_2936 NC_008726.1 3111776 3112585 D KEGG: mmc:Mmcs_2629 hypothetical protein; hypothetical protein 3111776..3112585 Mycobacterium vanbaalenii PYR-1 4645416 YP_953749.1 CDS Mvan_2937 NC_008726.1 3112748 3113494 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO7213 hypothetical protein; type 12 methyltransferase complement(3112748..3113494) Mycobacterium vanbaalenii PYR-1 4645417 YP_953750.1 CDS Mvan_2938 NC_008726.1 3113754 3115448 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_2628 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 3113754..3115448 Mycobacterium vanbaalenii PYR-1 4645418 YP_953751.1 CDS Mvan_2939 NC_008726.1 3115538 3115777 D TIGRFAM: prevent-host-death family protein; KEGG: ttj:TTHA0488 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 3115538..3115777 Mycobacterium vanbaalenii PYR-1 4645419 YP_953752.1 CDS Mvan_2940 NC_008726.1 3115774 3116163 D PFAM: PilT protein domain protein; KEGG: ttj:TTHA0487 hypothetical protein; PilT domain-containing protein 3115774..3116163 Mycobacterium vanbaalenii PYR-1 4649146 YP_953753.1 CDS Mvan_2941 NC_008726.1 3116147 3116473 R hypothetical protein complement(3116147..3116473) Mycobacterium vanbaalenii PYR-1 4649147 YP_953754.1 CDS Mvan_2942 NC_008726.1 3116686 3117408 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_2727 regulatory protein GntR, HTH; regulatory protein GntR 3116686..3117408 Mycobacterium vanbaalenii PYR-1 4649148 YP_953755.1 CDS Mvan_2943 NC_008726.1 3117405 3118070 D PFAM: fatty acid hydroxylase; KEGG: mmc:Mmcs_2728 fatty acid hydroxylase; fatty acid hydroxylase 3117405..3118070 Mycobacterium vanbaalenii PYR-1 4649149 YP_953756.1 CDS Mvan_2944 NC_008726.1 3118155 3118556 D KEGG: mmc:Mmcs_5425 pyruvate ferredoxin/flavodoxin oxidoreductase; hypothetical protein 3118155..3118556 Mycobacterium vanbaalenii PYR-1 4649150 YP_953757.1 CDS Mvan_2945 NC_008726.1 3118715 3118942 D KEGG: mmc:Mmcs_2632 hypothetical protein; hypothetical protein 3118715..3118942 Mycobacterium vanbaalenii PYR-1 4649151 YP_953758.1 CDS Mvan_2946 NC_008726.1 3119082 3120065 D PFAM: cation efflux protein; KEGG: syw:SYNW0900 putative cation efflux transporter (CDF family); cation efflux protein 3119082..3120065 Mycobacterium vanbaalenii PYR-1 4649152 YP_953759.1 CDS Mvan_2947 NC_008726.1 3120209 3120997 D KEGG: mbo:Mb3266c probable conserved integral membrane protein; putative integral membrane protein 3120209..3120997 Mycobacterium vanbaalenii PYR-1 4649153 YP_953760.1 CDS Mvan_2948 NC_008726.1 3121122 3121760 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rxy:Rxyl_0122 methyltransferase type 11; type 11 methyltransferase 3121122..3121760 Mycobacterium vanbaalenii PYR-1 4649154 YP_953761.1 CDS Mvan_2949 NC_008726.1 3121901 3122815 D PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_4928 beta-lactamase-like protein; beta-lactamase domain-containing protein 3121901..3122815 Mycobacterium vanbaalenii PYR-1 4649155 YP_953762.1 CDS Mvan_2950 NC_008726.1 3122847 3123467 D PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mpa:MAP1693c hypothetical protein; peptidylprolyl isomerase, FKBP-type 3122847..3123467 Mycobacterium vanbaalenii PYR-1 4649156 YP_953763.1 CDS Mvan_2951 NC_008726.1 3123486 3123869 D PFAM: RNA-binding S4 domain protein; KEGG: mmc:Mmcs_2663 RNA-binding S4; RNA-binding S4 domain-containing protein 3123486..3123869 Mycobacterium vanbaalenii PYR-1 4649157 YP_953764.1 CDS Mvan_2952 NC_008726.1 3123853 3124656 D KEGG: mmc:Mmcs_5260 hypothetical protein; hypothetical protein 3123853..3124656 Mycobacterium vanbaalenii PYR-1 4649158 YP_953765.1 CDS Mvan_2953 NC_008726.1 3124663 3126288 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0707 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3124663..3126288) Mycobacterium vanbaalenii PYR-1 4649159 YP_953766.1 CDS Mvan_2954 NC_008726.1 3126463 3127422 D PFAM: putative esterase; KEGG: mmc:Mmcs_1835 putative esterase; putative esterase 3126463..3127422 Mycobacterium vanbaalenii PYR-1 4649160 YP_953767.1 CDS Mvan_2955 NC_008726.1 3127482 3127802 R KEGG: mmc:Mmcs_5071 hypothetical protein; hypothetical protein complement(3127482..3127802) Mycobacterium vanbaalenii PYR-1 4649161 YP_953768.1 CDS Mvan_2956 NC_008726.1 3127831 3128400 D PFAM: Methyltransferase type 12; KEGG: mpa:MAP1480 hypothetical protein; type 12 methyltransferase 3127831..3128400 Mycobacterium vanbaalenii PYR-1 4649162 YP_953769.1 CDS Mvan_2957 NC_008726.1 3128414 3128794 R hypothetical protein complement(3128414..3128794) Mycobacterium vanbaalenii PYR-1 4649163 YP_953770.1 CDS Mvan_2958 NC_008726.1 3128845 3129213 R KEGG: mpa:MAP1745c hypothetical protein; hypothetical protein complement(3128845..3129213) Mycobacterium vanbaalenii PYR-1 4649164 YP_953771.1 CDS Mvan_2959 NC_008726.1 3129282 3129794 R PFAM: protein of unknown function DUF664; KEGG: sma:SAV7014 hypothetical protein; hypothetical protein complement(3129282..3129794) Mycobacterium vanbaalenii PYR-1 4649165 YP_953772.1 CDS Mvan_2960 NC_008726.1 3129859 3131400 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_2666 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3129859..3131400 Mycobacterium vanbaalenii PYR-1 4649166 YP_953773.1 CDS Mvan_2961 NC_008726.1 3131489 3132241 D KEGG: sil:SPO2301 OsmC-like family protein; OsmC-like family protein 3131489..3132241 Mycobacterium vanbaalenii PYR-1 4649167 YP_953774.1 CDS Mvan_2962 NC_008726.1 3132276 3133742 R KEGG: bps:BPSS0587 pyochelin synthetase; hypothetical protein complement(3132276..3133742) Mycobacterium vanbaalenii PYR-1 4649168 YP_953775.1 CDS Mvan_2963 NC_008726.1 3134057 3134569 R KEGG: mmc:Mmcs_5225 hypothetical protein; hypothetical protein complement(3134057..3134569) Mycobacterium vanbaalenii PYR-1 4649169 YP_953776.1 CDS Mvan_2964 NC_008726.1 3134601 3135302 D PFAM: protein of unknown function DUF218; KEGG: mmc:Mmcs_0878 protein of unknown function DUF218; hypothetical protein 3134601..3135302 Mycobacterium vanbaalenii PYR-1 4649170 YP_953777.1 CDS Mvan_2966 NC_008726.1 3136038 3137861 R activates fatty acids by binding to coenzyme A; putative fatty-acid--CoA ligase complement(3136038..3137861) Mycobacterium vanbaalenii PYR-1 4645094 YP_953778.1 CDS Mvan_2967 NC_008726.1 3137947 3139152 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein complement(3137947..3139152) Mycobacterium vanbaalenii PYR-1 4645095 YP_953779.1 CDS Mvan_2968 NC_008726.1 3139506 3140135 R PFAM: regulatory protein, TetR; KEGG: bba:Bd2155 putative transcriptional regulator; TetR family transcriptional regulator complement(3139506..3140135) Mycobacterium vanbaalenii PYR-1 4645096 YP_953780.1 CDS Mvan_2969 NC_008726.1 3140219 3141181 D KEGG: nfa:nfa29690 hypothetical protein; hypothetical protein 3140219..3141181 Mycobacterium vanbaalenii PYR-1 4645097 YP_953781.1 CDS Mvan_2970 NC_008726.1 3141218 3141844 R PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2672 NLP/P60; NLP/P60 protein complement(3141218..3141844) Mycobacterium vanbaalenii PYR-1 4645098 YP_953782.1 CDS tpx NC_008726.1 3142041 3142538 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(3142041..3142538) Mycobacterium vanbaalenii PYR-1 4645099 YP_953783.1 CDS Mvan_2972 NC_008726.1 3142604 3143290 R PFAM: protein of unknown function DUF899, thioredoxin family protein; KEGG: mmc:Mmcs_0337 protein of unknown function DUF899, thioredoxin-like protein; hypothetical protein complement(3142604..3143290) Mycobacterium vanbaalenii PYR-1 4645100 YP_953784.1 CDS Mvan_2973 NC_008726.1 3143378 3144076 D PFAM: TENA/THI-4 domain protein; KEGG: mmc:Mmcs_0357 transcriptional activator, TenA family; TenA family transcription regulator 3143378..3144076 Mycobacterium vanbaalenii PYR-1 4645101 YP_953785.1 CDS Mvan_2974 NC_008726.1 3144156 3145427 D KEGG: mmc:Mmcs_5190 GTP cyclohydrolase II domain protein; hypothetical protein 3144156..3145427 Mycobacterium vanbaalenii PYR-1 4645102 YP_953786.1 CDS Mvan_2975 NC_008726.1 3145424 3146677 D PFAM: protein of unknown function DUF1688; KEGG: mmc:Mmcs_5191 protein of unknown function DUF1688; hypothetical protein 3145424..3146677 Mycobacterium vanbaalenii PYR-1 4645103 YP_953787.1 CDS Mvan_2976 NC_008726.1 3146677 3147321 D TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mmc:Mmcs_5192 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 3146677..3147321 Mycobacterium vanbaalenii PYR-1 4645104 YP_953788.1 CDS Mvan_2977 NC_008726.1 3147365 3149665 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mpa:MAP1643 socitrate lyase; isocitrate lyase 3147365..3149665 Mycobacterium vanbaalenii PYR-1 4645105 YP_953789.1 CDS Mvan_2978 NC_008726.1 3149724 3150500 R KEGG: nfa:nfa55430 O-succinylbenzoate-CoA synthase; O-succinylbenzoate-CoA synthase complement(3149724..3150500) Mycobacterium vanbaalenii PYR-1 4645106 YP_953790.1 CDS Mvan_2979 NC_008726.1 3150544 3151692 D KEGG: mpa:MAP1429 hypothetical protein; hypothetical protein 3150544..3151692 Mycobacterium vanbaalenii PYR-1 4645107 YP_953791.1 CDS Mvan_2980 NC_008726.1 3151717 3152499 D Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3151717..3152499 Mycobacterium vanbaalenii PYR-1 4645108 YP_953792.1 CDS Mvan_2981 NC_008726.1 3152468 3152842 R PFAM: globin; KEGG: fra:Francci3_2581 globin; globin complement(3152468..3152842) Mycobacterium vanbaalenii PYR-1 4645109 YP_953793.1 CDS Mvan_2982 NC_008726.1 3152943 3153236 R PFAM: Stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein complement(3152943..3153236) Mycobacterium vanbaalenii PYR-1 4645110 YP_953794.1 CDS Mvan_2983 NC_008726.1 3153316 3153765 D PFAM: ferric-uptake regulator; KEGG: mmc:Mmcs_2681 ferric uptake regulator, Fur family; ferric uptake regulator family protein 3153316..3153765 Mycobacterium vanbaalenii PYR-1 4645111 YP_953795.1 CDS Mvan_2984 NC_008726.1 3153802 3156015 D KEGG: mbo:Mb1943c catalase-peroxidase-peroxynitritase T KatG; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 3153802..3156015 Mycobacterium vanbaalenii PYR-1 4645112 YP_953796.1 CDS Mvan_2985 NC_008726.1 3156092 3156781 R PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_2685 lipolytic enzyme, G-D-S-L; GDSL family lipase complement(3156092..3156781) Mycobacterium vanbaalenii PYR-1 4645113 YP_953797.1 CDS Mvan_2986 NC_008726.1 3156829 3158043 R PFAM: acyltransferase 3; KEGG: mmc:Mmcs_2686 acyltransferase 3; acyltransferase 3 complement(3156829..3158043) Mycobacterium vanbaalenii PYR-1 4645114 YP_953798.1 CDS Mvan_2987 NC_008726.1 3158315 3159490 D PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_2688 response regulator receiver modulated serine phosphatase; response regulator receiver protein 3158315..3159490 Mycobacterium vanbaalenii PYR-1 4645115 YP_953799.1 CDS Mvan_2988 NC_008726.1 3159487 3161076 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: mmc:Mmcs_2689 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 3159487..3161076 Mycobacterium vanbaalenii PYR-1 4645116 YP_953800.1 CDS Mvan_2989 NC_008726.1 3161073 3161513 D PFAM: response regulator receiver; KEGG: mmc:Mmcs_2690 response regulator receiver protein; response regulator receiver protein 3161073..3161513 Mycobacterium vanbaalenii PYR-1 4645117 YP_953801.1 CDS Mvan_2990 NC_008726.1 3161515 3162648 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: mmc:Mmcs_2694 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 3161515..3162648 Mycobacterium vanbaalenii PYR-1 4645118 YP_953802.1 CDS Mvan_2991 NC_008726.1 3162909 3163490 D KEGG: mmc:Mmcs_2693 hypothetical protein; hypothetical protein 3162909..3163490 Mycobacterium vanbaalenii PYR-1 4648519 YP_953803.1 CDS Mvan_2992 NC_008726.1 3163527 3164273 D PFAM: protein of unknown function DUF328; KEGG: mmc:Mmcs_2696 protein of unknown function DUF328; hypothetical protein 3163527..3164273 Mycobacterium vanbaalenii PYR-1 4648520 YP_953804.1 CDS Mvan_2993 NC_008726.1 3164293 3164796 R KEGG: mmc:Mmcs_2703 hypothetical protein; hypothetical protein complement(3164293..3164796) Mycobacterium vanbaalenii PYR-1 4648521 YP_953805.1 CDS Mvan_2994 NC_008726.1 3164885 3165133 D KEGG: mmc:Mmcs_0989 hypothetical protein; hypothetical protein 3164885..3165133 Mycobacterium vanbaalenii PYR-1 4648522 YP_953806.1 CDS Mvan_2995 NC_008726.1 3165138 3165497 D hypothetical protein 3165138..3165497 Mycobacterium vanbaalenii PYR-1 4648523 YP_953807.1 CDS Mvan_2996 NC_008726.1 3165497 3166357 D KEGG: mmc:Mmcs_2479 hypothetical protein; hypothetical protein 3165497..3166357 Mycobacterium vanbaalenii PYR-1 4648524 YP_953808.1 CDS Mvan_2997 NC_008726.1 3166377 3167297 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_2706 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3166377..3167297 Mycobacterium vanbaalenii PYR-1 4648525 YP_953809.1 CDS Mvan_2998 NC_008726.1 3167305 3167529 R KEGG: mmc:Mmcs_2709 hypothetical protein; hypothetical protein complement(3167305..3167529) Mycobacterium vanbaalenii PYR-1 4648526 YP_953810.1 CDS Mvan_2999 NC_008726.1 3167586 3168854 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mmc:Mmcs_2707 competence-damaged protein; competence damage-inducible protein A complement(3167586..3168854) Mycobacterium vanbaalenii PYR-1 4648527 YP_953811.1 CDS Mvan_3000 NC_008726.1 3168897 3169643 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2711 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3168897..3169643) Mycobacterium vanbaalenii PYR-1 4648528 YP_953812.1 CDS Mvan_3001 NC_008726.1 3169724 3170800 D PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_2712 dihydrodipicolinate reductase; dihydrodipicolinate reductase 3169724..3170800 Mycobacterium vanbaalenii PYR-1 4648529 YP_953813.1 CDS Mvan_3002 NC_008726.1 3170801 3171247 R KEGG: mmc:Mmcs_2713 putative anti-sigma regulatory factor, serine/threonine protein kinase; putative anti-sigma regulatory factor complement(3170801..3171247) Mycobacterium vanbaalenii PYR-1 4648530 YP_953814.1 CDS Mvan_3003 NC_008726.1 3171293 3171685 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2714 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(3171293..3171685) Mycobacterium vanbaalenii PYR-1 4648531 YP_953815.1 CDS Mvan_3004 NC_008726.1 3171893 3172657 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: mmc:Mmcs_2716 HAD-superfamily subfamily IB, PSPase-like protein; HAD family hydrolase 3171893..3172657 Mycobacterium vanbaalenii PYR-1 4648532 YP_953816.1 CDS Mvan_3005 NC_008726.1 3172711 3173841 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_2717 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 3172711..3173841 Mycobacterium vanbaalenii PYR-1 4648533 YP_953817.1 CDS Mvan_3006 NC_008726.1 3173896 3176274 R PFAM: ABC transporter related; KEGG: mmc:Mmcs_1738 ABC transporter related; ABC transporter--like protein complement(3173896..3176274) Mycobacterium vanbaalenii PYR-1 4648534 YP_953818.1 CDS Mvan_3007 NC_008726.1 3176277 3176687 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rxy:Rxyl_2644 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3176277..3176687) Mycobacterium vanbaalenii PYR-1 4648535 YP_953819.1 CDS Mvan_3008 NC_008726.1 3176693 3177142 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:nfa43930 putative transcriptional regulator; helix-turn-helix domain-containing protein complement(3176693..3177142) Mycobacterium vanbaalenii PYR-1 4648536 YP_953820.1 CDS Mvan_3009 NC_008726.1 3177227 3177826 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2720 transcriptional regulator, TetR family; TetR family transcriptional regulator 3177227..3177826 Mycobacterium vanbaalenii PYR-1 4648537 YP_953821.1 CDS Mvan_3010 NC_008726.1 3177823 3180087 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_2721 formate dehydrogenase; formate dehydrogenase 3177823..3180087 Mycobacterium vanbaalenii PYR-1 4648538 YP_953822.1 CDS Mvan_3011 NC_008726.1 3180084 3180611 R KEGG: mmc:Mmcs_2722 hypothetical protein; hypothetical protein complement(3180084..3180611) Mycobacterium vanbaalenii PYR-1 4648539 YP_953823.1 CDS Mvan_3012 NC_008726.1 3180777 3182036 D PFAM: cytochrome P450; KEGG: mpa:MAP1614c putative cytochrome P450; cytochrome P450 3180777..3182036 Mycobacterium vanbaalenii PYR-1 4648540 YP_953824.1 CDS Mvan_3013 NC_008726.1 3182106 3182414 R KEGG: mmc:Mmcs_2724 hypothetical protein; hypothetical protein complement(3182106..3182414) Mycobacterium vanbaalenii PYR-1 4648541 YP_953825.1 CDS Mvan_3014 NC_008726.1 3182488 3183300 D PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_2725 transcriptional regulator, XRE family; XRE family transcriptional regulator 3182488..3183300 Mycobacterium vanbaalenii PYR-1 4648542 YP_953826.1 CDS Mvan_3017 NC_008726.1 3184196 3184825 D TIGRFAM: uncharacterized peroxidase-related enzyme; KEGG: mmc:Mmcs_2585 uncharacterised peroxidase-related; peroxidase-like protein 3184196..3184825 Mycobacterium vanbaalenii PYR-1 4647199 YP_953827.1 CDS Mvan_3018 NC_008726.1 3184837 3185271 D KEGG: mmc:Mmcs_2726 hypothetical protein; hypothetical protein 3184837..3185271 Mycobacterium vanbaalenii PYR-1 4647200 YP_953828.1 CDS Mvan_3019 NC_008726.1 3185283 3186083 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_2729 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(3185283..3186083) Mycobacterium vanbaalenii PYR-1 4647201 YP_953829.1 CDS Mvan_3020 NC_008726.1 3186151 3186774 R KEGG: mmc:Mmcs_2730 hypothetical protein; hypothetical protein complement(3186151..3186774) Mycobacterium vanbaalenii PYR-1 4647202 YP_953830.1 CDS Mvan_3021 NC_008726.1 3186797 3188083 R KEGG: mpa:MAP1611 hypothetical protein; FHA domain-containing protein complement(3186797..3188083) Mycobacterium vanbaalenii PYR-1 4647203 YP_953831.1 CDS Mvan_3022 NC_008726.1 3188162 3189121 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mmc:Mmcs_2731 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta complement(3188162..3189121) Mycobacterium vanbaalenii PYR-1 4647204 YP_953832.1 CDS Mvan_3023 NC_008726.1 3189161 3189583 D PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2733 thioesterase superfamily; thioesterase superfamily protein 3189161..3189583 Mycobacterium vanbaalenii PYR-1 4647205 YP_953833.1 CDS Mvan_3024 NC_008726.1 3189601 3190665 D TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_2734 agmatinase, putative; putative agmatinase 3189601..3190665 Mycobacterium vanbaalenii PYR-1 4647206 YP_953834.1 CDS Mvan_3025 NC_008726.1 3190649 3191530 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_2735 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(3190649..3191530) Mycobacterium vanbaalenii PYR-1 4647207 YP_953835.1 CDS Mvan_3026 NC_008726.1 3191826 3192032 D KEGG: mmc:Mmcs_2736 hypothetical protein; hypothetical protein 3191826..3192032 Mycobacterium vanbaalenii PYR-1 4647208 YP_953836.1 CDS Mvan_3027 NC_008726.1 3192057 3193277 D PFAM: beta-lactamase; KEGG: sma:SAV2663 beta-lactamase; serine-type D-Ala-D-Ala carboxypeptidase 3192057..3193277 Mycobacterium vanbaalenii PYR-1 4647209 YP_953837.1 CDS Mvan_3028 NC_008726.1 3193300 3193728 D KEGG: mmc:Mmcs_2741 hypothetical protein; hypothetical protein 3193300..3193728 Mycobacterium vanbaalenii PYR-1 4647210 YP_953838.1 CDS Mvan_3029 NC_008726.1 3193746 3195047 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_2742 cytochrome P450; cytochrome P450 3193746..3195047 Mycobacterium vanbaalenii PYR-1 4647211 YP_953839.1 CDS Mvan_3030 NC_008726.1 3195183 3196631 R PFAM: transposase, IS4 family protein; KEGG: mmc:Mmcs_5428 TnpC protein; transposase, IS4 family protein complement(3195183..3196631) Mycobacterium vanbaalenii PYR-1 4647212 YP_953840.1 CDS Mvan_3031 NC_008726.1 3196707 3197180 R KEGG: mmc:Mmcs_2747 hypothetical protein; hypothetical protein complement(3196707..3197180) Mycobacterium vanbaalenii PYR-1 4647213 YP_953841.1 CDS Mvan_3032 NC_008726.1 3197271 3197696 R KEGG: mmc:Mmcs_0238 hypothetical protein; hypothetical protein complement(3197271..3197696) Mycobacterium vanbaalenii PYR-1 4647214 YP_953842.1 CDS Mvan_3033 NC_008726.1 3197711 3198817 R PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_2748 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3197711..3198817) Mycobacterium vanbaalenii PYR-1 4647215 YP_953843.1 CDS Mvan_3034 NC_008726.1 3198902 3199858 R PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_2750 dienelactone hydrolase; dienelactone hydrolase complement(3198902..3199858) Mycobacterium vanbaalenii PYR-1 4647216 YP_953844.1 CDS Mvan_3035 NC_008726.1 3199953 3201767 D KEGG: mmc:Mmcs_2752 hypothetical protein; hypothetical protein 3199953..3201767 Mycobacterium vanbaalenii PYR-1 4647217 YP_953845.1 CDS Mvan_3036 NC_008726.1 3201757 3202227 D PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2753 limonene-1,2-epoxide hydrolase; limonene-1,2-epoxide hydrolase 3201757..3202227 Mycobacterium vanbaalenii PYR-1 4647218 YP_953846.1 CDS Mvan_3037 NC_008726.1 3202238 3204001 D PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: mmc:Mmcs_5309 amidohydrolase 3; amidohydrolase 3 3202238..3204001 Mycobacterium vanbaalenii PYR-1 4647219 YP_953847.1 CDS Mvan_3038 NC_008726.1 3204076 3204561 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mmc:Mmcs_5358 activator of HSP90 ATPase 1-like protein; activator of Hsp90 ATPase 1 family protein complement(3204076..3204561) Mycobacterium vanbaalenii PYR-1 4647220 YP_953848.1 CDS Mvan_3039 NC_008726.1 3204564 3204923 R PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_5359 transcriptional regulator, ArsR family; regulatory protein ArsR complement(3204564..3204923) Mycobacterium vanbaalenii PYR-1 4647221 YP_953849.1 CDS Mvan_3041 NC_008726.1 3206517 3206999 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_2755 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(3206517..3206999) Mycobacterium vanbaalenii PYR-1 4643262 YP_953850.1 CDS Mvan_3042 NC_008726.1 3207019 3209076 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2756 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(3207019..3209076) Mycobacterium vanbaalenii PYR-1 4643263 YP_953851.1 CDS Mvan_3043 NC_008726.1 3209182 3209661 R TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: mmc:Mmcs_2757 bacterioferritin; bacterioferritin complement(3209182..3209661) Mycobacterium vanbaalenii PYR-1 4643264 YP_953852.1 CDS Mvan_3044 NC_008726.1 3209926 3210558 D KEGG: mmc:Mmcs_2758 FadD16; FadD16 protein 3209926..3210558 Mycobacterium vanbaalenii PYR-1 4643265 YP_953853.1 CDS Mvan_3045 NC_008726.1 3210568 3210756 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_2759 BFD-like (2Fe-2S)-binding region; BFD/(2Fe-2S)-binding domain-containing protein 3210568..3210756 Mycobacterium vanbaalenii PYR-1 4643266 YP_953854.1 CDS Mvan_3046 NC_008726.1 3210760 3211518 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1593 putative enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(3210760..3211518) Mycobacterium vanbaalenii PYR-1 4643267 YP_953855.1 CDS Mvan_3047 NC_008726.1 3211515 3212252 R KEGG: mmc:Mmcs_2761 hypothetical protein; hypothetical protein complement(3211515..3212252) Mycobacterium vanbaalenii PYR-1 4643268 YP_953856.1 CDS Mvan_3048 NC_008726.1 3212293 3214311 D PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: mmc:Mmcs_2762 membrane protein-like protein; hypothetical protein 3212293..3214311 Mycobacterium vanbaalenii PYR-1 4643269 YP_953857.1 CDS Mvan_3049 NC_008726.1 3214283 3214909 R PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2763 thioesterase superfamily; thioesterase superfamily protein complement(3214283..3214909) Mycobacterium vanbaalenii PYR-1 4643270 YP_953858.1 CDS Mvan_3050 NC_008726.1 3215103 3216590 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein 3215103..3216590 Mycobacterium vanbaalenii PYR-1 4643271 YP_953859.1 CDS Mvan_3051 NC_008726.1 3216672 3217367 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rxy:Rxyl_1028 transcriptional regulator, GntR family; GntR family transcriptional regulator 3216672..3217367 Mycobacterium vanbaalenii PYR-1 4643272 YP_953860.1 CDS Mvan_3052 NC_008726.1 3217431 3218834 D PFAM: Amidase; KEGG: mmc:Mmcs_2764 amidase; amidase 3217431..3218834 Mycobacterium vanbaalenii PYR-1 4643273 YP_953861.1 CDS Mvan_3053 NC_008726.1 3218831 3219523 D PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_2765 isochorismatase hydrolase; isochorismatase hydrolase 3218831..3219523 Mycobacterium vanbaalenii PYR-1 4643274 YP_953862.1 CDS Mvan_3054 NC_008726.1 3219547 3221148 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: mmc:Mmcs_2766 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3219547..3221148 Mycobacterium vanbaalenii PYR-1 4643275 YP_953863.1 CDS Mvan_3055 NC_008726.1 3221245 3221838 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2767 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 3221245..3221838 Mycobacterium vanbaalenii PYR-1 4643276 YP_953864.1 CDS Mvan_3056 NC_008726.1 3221831 3222892 D KEGG: mmc:Mmcs_2768 integral membrane protein; integral membrane protein 3221831..3222892 Mycobacterium vanbaalenii PYR-1 4643277 YP_953865.1 CDS Mvan_3057 NC_008726.1 3222828 3224507 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mmc:Mmcs_2769 tetratricopeptide TPR_2; hypothetical protein 3222828..3224507 Mycobacterium vanbaalenii PYR-1 4643278 YP_953866.1 CDS Mvan_3058 NC_008726.1 3224676 3225155 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mmc:Mmcs_2770 CMP/dCMP deaminase, zinc-binding protein; CMP/dCMP deaminase 3224676..3225155 Mycobacterium vanbaalenii PYR-1 4643279 YP_953867.1 CDS Mvan_3059 NC_008726.1 3225248 3226552 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mmc:Mmcs_2771 alpha amylase, catalytic region; alpha amylase 3225248..3226552 Mycobacterium vanbaalenii PYR-1 4643280 YP_953868.1 CDS Mvan_3060 NC_008726.1 3226557 3226985 R KEGG: mmc:Mmcs_2772 hypothetical protein; hypothetical protein complement(3226557..3226985) Mycobacterium vanbaalenii PYR-1 4643281 YP_953869.1 CDS Mvan_3061 NC_008726.1 3227245 3228249 D PFAM: putative esterase; KEGG: mmc:Mmcs_2773 putative esterase; putative esterase 3227245..3228249 Mycobacterium vanbaalenii PYR-1 4643282 YP_953870.1 CDS Mvan_3062 NC_008726.1 3228313 3229635 R PFAM: GCN5-related N-acetyltransferase; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: fra:Francci3_3406 AAA ATPase, central region; ATPase central domain-containing protein complement(3228313..3229635) Mycobacterium vanbaalenii PYR-1 4643283 YP_953871.1 CDS Mvan_3063 NC_008726.1 3229678 3230424 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1552 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3229678..3230424) Mycobacterium vanbaalenii PYR-1 4643284 YP_953872.1 CDS Mvan_3064 NC_008726.1 3230538 3232868 D KEGG: mmc:Mmcs_2775 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3230538..3232868 Mycobacterium vanbaalenii PYR-1 4643285 YP_953873.1 CDS Mvan_3065 NC_008726.1 3232960 3233292 D KEGG: mmc:Mmcs_2776 hypothetical protein; hypothetical protein 3232960..3233292 Mycobacterium vanbaalenii PYR-1 4643286 YP_953874.1 CDS Mvan_3066 NC_008726.1 3233297 3233917 D KEGG: mmc:Mmcs_2779 hypothetical protein; hypothetical protein 3233297..3233917 Mycobacterium vanbaalenii PYR-1 4643287 YP_953875.1 CDS Mvan_3067 NC_008726.1 3233932 3234930 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 3233932..3234930 Mycobacterium vanbaalenii PYR-1 4646973 YP_953876.1 CDS Mvan_3068 NC_008726.1 3234934 3236409 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(3234934..3236409) Mycobacterium vanbaalenii PYR-1 4646974 YP_953877.1 CDS Mvan_3069 NC_008726.1 3236585 3239083 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: fra:Francci3_3546 fructose-6-phosphate phosphoketolase; putative phosphoketolase 3236585..3239083 Mycobacterium vanbaalenii PYR-1 4646975 YP_953878.1 CDS Mvan_3070 NC_008726.1 3239103 3239864 D PFAM: Abortive infection protein; KEGG: mbo:Mb1894c probable conserved integral membrane protein; abortive infection protein 3239103..3239864 Mycobacterium vanbaalenii PYR-1 4646976 YP_953879.1 CDS Mvan_3071 NC_008726.1 3239811 3240443 R PFAM: protein of unknown function DUF1470; KEGG: sco:SCO3054 hypothetical protein; hypothetical protein complement(3239811..3240443) Mycobacterium vanbaalenii PYR-1 4646977 YP_953880.1 CDS Mvan_3072 NC_008726.1 3240588 3241040 D hypothetical protein 3240588..3241040 Mycobacterium vanbaalenii PYR-1 4646978 YP_953881.1 CDS Mvan_3073 NC_008726.1 3241045 3242046 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP1571 alcohol dehydrogenase; alcohol dehydrogenase complement(3241045..3242046) Mycobacterium vanbaalenii PYR-1 4646979 YP_953882.1 CDS Mvan_3074 NC_008726.1 3242090 3242395 R PFAM: Transglycosylase-associated protein; KEGG: mle:ML2054 integral membrane protein; transglycosylase-associated protein complement(3242090..3242395) Mycobacterium vanbaalenii PYR-1 4646980 YP_953883.1 CDS Mvan_3075 NC_008726.1 3242512 3243528 R PFAM: Fibronectin-attachment family protein; KEGG: mmc:Mmcs_2796 fibronectin-attachment; fibronectin-attachment family protein complement(3242512..3243528) Mycobacterium vanbaalenii PYR-1 4646981 YP_953884.1 CDS Mvan_3076 NC_008726.1 3243860 3244531 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2799 short chain dehydrogenase; short chain dehydrogenase 3243860..3244531 Mycobacterium vanbaalenii PYR-1 4646982 YP_953885.1 CDS Mvan_3077 NC_008726.1 3244631 3245560 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_2800 luciferase-like protein; luciferase family protein 3244631..3245560 Mycobacterium vanbaalenii PYR-1 4646983 YP_953886.1 CDS Mvan_3078 NC_008726.1 3245683 3247056 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_2801 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3245683..3247056 Mycobacterium vanbaalenii PYR-1 4646984 YP_953887.1 CDS Mvan_3079 NC_008726.1 3247053 3247679 R KEGG: mmc:Mmcs_2802 putative urease accessory protein; putative urease accessory protein complement(3247053..3247679) Mycobacterium vanbaalenii PYR-1 4646985 YP_953888.1 CDS Mvan_3080 NC_008726.1 3247679 3248359 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: mmc:Mmcs_2803 urease accessory protein UreG; urease accessory protein UreG complement(3247679..3248359) Mycobacterium vanbaalenii PYR-1 4646986 YP_953889.1 CDS Mvan_3081 NC_008726.1 3248374 3249018 R KEGG: mmc:Mmcs_2804 urease accessory protein UreF; urease accessory protein UreF complement(3248374..3249018) Mycobacterium vanbaalenii PYR-1 4646987 YP_953890.1 CDS ureC NC_008726.1 3249018 3250739 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3249018..3250739) Mycobacterium vanbaalenii PYR-1 4646988 YP_953891.1 CDS Mvan_3083 NC_008726.1 3250736 3251050 R KEGG: mmc:Mmcs_2806 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; urease subunit beta complement(3250736..3251050) Mycobacterium vanbaalenii PYR-1 4646989 YP_953892.1 CDS ureA NC_008726.1 3251093 3251395 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(3251093..3251395) Mycobacterium vanbaalenii PYR-1 4646990 YP_953893.1 CDS Mvan_3085 NC_008726.1 3251623 3252027 R TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2808 phenylacetic acid degradation-related protein; hypothetical protein complement(3251623..3252027) Mycobacterium vanbaalenii PYR-1 4646991 YP_953894.1 CDS Mvan_3086 NC_008726.1 3252216 3252989 R KEGG: mmc:Mmcs_2809 hypothetical protein; hypothetical protein complement(3252216..3252989) Mycobacterium vanbaalenii PYR-1 4646992 YP_953895.1 CDS Mvan_3087 NC_008726.1 3253231 3253647 D PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_2810 transcriptional repressor, CopY family; CopY family transcriptional regulator 3253231..3253647 Mycobacterium vanbaalenii PYR-1 4646993 YP_953896.1 CDS Mvan_3088 NC_008726.1 3253662 3254597 D PFAM: peptidase M48, Ste24p; KEGG: mmc:Mmcs_2811 peptidase M48, Ste24p; peptidase M48, Ste24p 3253662..3254597 Mycobacterium vanbaalenii PYR-1 4646994 YP_953897.1 CDS Mvan_3089 NC_008726.1 3254653 3256122 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 3254653..3256122 Mycobacterium vanbaalenii PYR-1 4646995 YP_953898.1 CDS Mvan_3090 NC_008726.1 3256145 3257581 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 3256145..3257581 Mycobacterium vanbaalenii PYR-1 4646996 YP_953899.1 CDS Mvan_3091 NC_008726.1 3257534 3258628 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fra:Francci3_1590 ABC transporter related; ABC transporter--like protein complement(3257534..3258628) Mycobacterium vanbaalenii PYR-1 4646997 YP_953900.1 CDS Mvan_3092 NC_008726.1 3258606 3260150 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_1174 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3258606..3260150) Mycobacterium vanbaalenii PYR-1 4646848 YP_953901.1 CDS Mvan_3093 NC_008726.1 3260154 3261176 R PFAM: extracellular solute-binding protein, family 1; KEGG: rxy:Rxyl_1175 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(3260154..3261176) Mycobacterium vanbaalenii PYR-1 4646849 YP_953902.1 CDS Mvan_3094 NC_008726.1 3261533 3262888 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_2814 protein of unknown function DUF21; hypothetical protein 3261533..3262888 Mycobacterium vanbaalenii PYR-1 4646850 YP_953903.1 CDS Mvan_3095 NC_008726.1 3262881 3263942 D PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: mmc:Mmcs_2815 protein of unknown function DUF21; hypothetical protein 3262881..3263942 Mycobacterium vanbaalenii PYR-1 4646851 YP_953904.1 CDS Mvan_3096 NC_008726.1 3263920 3264816 D KEGG: mmc:Mmcs_2816 hypothetical protein; hypothetical protein 3263920..3264816 Mycobacterium vanbaalenii PYR-1 4646852 YP_953905.1 CDS Mvan_3097 NC_008726.1 3264890 3267094 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3264890..3267094 Mycobacterium vanbaalenii PYR-1 4646853 YP_953906.1 CDS Mvan_3098 NC_008726.1 3267148 3269070 D PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2818 hypothetical protein; von Willebrand factor, type A 3267148..3269070 Mycobacterium vanbaalenii PYR-1 4646854 YP_953907.1 CDS Mvan_3099 NC_008726.1 3269122 3270708 D PFAM: Animal haem peroxidase; KEGG: neu:NE1240 putative cyclooxygenase-2; prostaglandin-endoperoxide synthase 3269122..3270708 Mycobacterium vanbaalenii PYR-1 4646855 YP_953908.1 CDS Mvan_3100 NC_008726.1 3270943 3272133 D PFAM: fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase; alkane 1-monooxygenase 3270943..3272133 Mycobacterium vanbaalenii PYR-1 4646856 YP_953909.1 CDS Mvan_3101 NC_008726.1 3272113 3272955 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4117 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3272113..3272955) Mycobacterium vanbaalenii PYR-1 4646857 YP_953910.1 CDS Mvan_3102 NC_008726.1 3273016 3274248 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein; hypothetical protein complement(3273016..3274248) Mycobacterium vanbaalenii PYR-1 4646858 YP_953911.1 CDS Mvan_3103 NC_008726.1 3275146 3276387 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein 3275146..3276387 Mycobacterium vanbaalenii PYR-1 4646859 YP_953912.1 CDS Mvan_3104 NC_008726.1 3276547 3278031 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP2018c hypothetical protein; cyclohexanone monooxygenase 3276547..3278031 Mycobacterium vanbaalenii PYR-1 4646860 YP_953913.1 CDS Mvan_3105 NC_008726.1 3278091 3278756 D PFAM: cutinase; KEGG: mpa:MAP1680c hypothetical protein; cutinase 3278091..3278756 Mycobacterium vanbaalenii PYR-1 4646861 YP_953914.1 CDS Mvan_3106 NC_008726.1 3278937 3280172 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1828 PPE family protein; hypothetical protein 3278937..3280172 Mycobacterium vanbaalenii PYR-1 4646862 YP_953915.1 CDS Mvan_3107 NC_008726.1 3280200 3281045 D PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP3216 Omt; O-methyltransferase domain-containing protein 3280200..3281045 Mycobacterium vanbaalenii PYR-1 4646863 YP_953916.1 CDS Mvan_3108 NC_008726.1 3281042 3282406 R PFAM: cytochrome P450; KEGG: mpa:MAP3553 putative cytochrome P450; cytochrome P450 complement(3281042..3282406) Mycobacterium vanbaalenii PYR-1 4646864 YP_953917.1 CDS Mvan_3109 NC_008726.1 3282438 3283922 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2826 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3282438..3283922) Mycobacterium vanbaalenii PYR-1 4646865 YP_953918.1 CDS Mvan_3110 NC_008726.1 3283956 3286262 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein complement(3283956..3286262) Mycobacterium vanbaalenii PYR-1 4646866 YP_953919.1 CDS Mvan_3111 NC_008726.1 3286591 3286890 R hypothetical protein complement(3286591..3286890) Mycobacterium vanbaalenii PYR-1 4646867 YP_953920.1 CDS Mvan_3112 NC_008726.1 3287142 3287924 R PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2984 hypothetical protein; alpha/beta hydrolase fold protein complement(3287142..3287924) Mycobacterium vanbaalenii PYR-1 4646868 YP_953921.1 CDS Mvan_3113 NC_008726.1 3287966 3288754 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP1255 hypothetical protein; short-chain dehydrogenase/reductase SDR 3287966..3288754 Mycobacterium vanbaalenii PYR-1 4646869 YP_953922.1 CDS Mvan_3114 NC_008726.1 3288751 3290166 R KEGG: xla:397995 middle molecular weight neurofilament protein NF-M(2); hypothetical protein complement(3288751..3290166) Mycobacterium vanbaalenii PYR-1 4646870 YP_953923.1 CDS Mvan_3115 NC_008726.1 3290305 3291024 R PFAM: nitroreductase; KEGG: mmc:Mmcs_1184 nitroreductase; nitroreductase complement(3290305..3291024) Mycobacterium vanbaalenii PYR-1 4646871 YP_953924.1 CDS Mvan_3116 NC_008726.1 3291027 3291542 R KEGG: mpa:MAP3164 hypothetical protein; hypothetical protein complement(3291027..3291542) Mycobacterium vanbaalenii PYR-1 4646872 YP_953925.1 CDS Mvan_3117 NC_008726.1 3291547 3292233 R KEGG: dar:Daro_2367 hypothetical protein; hypothetical protein complement(3291547..3292233) Mycobacterium vanbaalenii PYR-1 4646147 YP_953926.1 CDS Mvan_3118 NC_008726.1 3292296 3293123 D PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_5088 O-methyltransferase-like protein; O-methyltransferase domain-containing protein 3292296..3293123 Mycobacterium vanbaalenii PYR-1 4646148 YP_953927.1 CDS Mvan_3119 NC_008726.1 3293128 3294378 R required for PDIM synthesis; phthiocerol and phthiodiolone dimycocerosate esters are scaffolds used for virulence-enhancing lipids; proposed to catalyze diesterification of phthiocerol and phthiodolone with mycocerosate; functions in polyketide synthesis; acyltransferase PapA5 complement(3293128..3294378) Mycobacterium vanbaalenii PYR-1 4646149 YP_953928.1 CDS Mvan_3120 NC_008726.1 3294424 3295278 R TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2829 daunorubicin resistance protein C; multidrug ABC transporter inner membrane protein complement(3294424..3295278) Mycobacterium vanbaalenii PYR-1 4646150 YP_953929.1 CDS Mvan_3121 NC_008726.1 3295275 3296099 R TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2830 ABC transporter, DrrB efflux protein; multidrug ABC transporter inner membrane protein complement(3295275..3296099) Mycobacterium vanbaalenii PYR-1 4646151 YP_953930.1 CDS Mvan_3122 NC_008726.1 3296096 3297100 R KEGG: mmc:Mmcs_2831 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase subunit complement(3296096..3297100) Mycobacterium vanbaalenii PYR-1 4646152 YP_953931.1 CDS Mvan_3123 NC_008726.1 3297119 3301531 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; condensation domain protein; phosphopantetheine-binding; KEGG: mbo:Mb2960 phenolpthiocerol synthesis type-I polyketide synthase PpsE; beta-ketoacyl synthase complement(3297119..3301531) Mycobacterium vanbaalenii PYR-1 4646153 YP_953932.1 CDS Mvan_3124 NC_008726.1 3301528 3306945 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mbo:Mb2959 phenolpthiocerol synthesis type-I polyketide synthase PpsD; beta-ketoacyl synthase complement(3301528..3306945) Mycobacterium vanbaalenii PYR-1 4646154 YP_953933.1 CDS Mvan_3125 NC_008726.1 3306945 3312383 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2833 beta-ketoacyl synthase; beta-ketoacyl synthase complement(3306945..3312383) Mycobacterium vanbaalenii PYR-1 4646155 YP_953934.1 CDS Mvan_3126 NC_008726.1 3312389 3317134 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase; beta-ketoacyl synthase complement(3312389..3317134) Mycobacterium vanbaalenii PYR-1 4646156 YP_953935.1 CDS Mvan_3127 NC_008726.1 3317131 3318861 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3317131..3318861) Mycobacterium vanbaalenii PYR-1 4646157 YP_953936.1 CDS Mvan_3128 NC_008726.1 3318921 3324407 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mtu:Rv2931 phenolpthiocerol synthesis polyketide synthase; beta-ketoacyl synthase complement(3318921..3324407) Mycobacterium vanbaalenii PYR-1 4646158 YP_953937.1 CDS Mvan_3129 NC_008726.1 3324404 3326182 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3324404..3326182) Mycobacterium vanbaalenii PYR-1 4646159 YP_953938.1 CDS Mvan_3130 NC_008726.1 3326737 3327480 R PFAM: Thioesterase; KEGG: mle:ML2359 thioesterase; thioesterase complement(3326737..3327480) Mycobacterium vanbaalenii PYR-1 4646160 YP_953939.1 CDS Mvan_3131 NC_008726.1 3327511 3330363 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(3327511..3330363) Mycobacterium vanbaalenii PYR-1 4646161 YP_953940.1 CDS Mvan_3132 NC_008726.1 3330988 3331611 R SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(3330988..3331611) Mycobacterium vanbaalenii PYR-1 4646162 YP_953941.1 CDS Mvan_3133 NC_008726.1 3331811 3332305 R PFAM: protein of unknown function DUF151; KEGG: mmc:Mmcs_2842 protein of unknown function DUF151; hypothetical protein complement(3331811..3332305) Mycobacterium vanbaalenii PYR-1 4646163 YP_953942.1 CDS Mvan_3134 NC_008726.1 3332353 3333087 R PFAM: regulatory protein, MerR; KEGG: mbo:Mb1859 hypothetical protein; MerR family transcriptional regulator complement(3332353..3333087) Mycobacterium vanbaalenii PYR-1 4646164 YP_953943.1 CDS Mvan_3135 NC_008726.1 3333108 3333581 R PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_2844 FHA domain containing protein; FHA domain-containing protein complement(3333108..3333581) Mycobacterium vanbaalenii PYR-1 4646165 YP_953944.1 CDS Mvan_3136 NC_008726.1 3333738 3334133 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(3333738..3334133) Mycobacterium vanbaalenii PYR-1 4646166 YP_953945.1 CDS Mvan_3137 NC_008726.1 3334154 3334918 R PFAM: protein of unknown function DUF881; KEGG: mmc:Mmcs_2846 protein of unknown function DUF881; hypothetical protein complement(3334154..3334918) Mycobacterium vanbaalenii PYR-1 4646167 YP_953946.1 CDS Mvan_3138 NC_008726.1 3334921 3335274 R PFAM: protein of unknown function DUF1290; KEGG: mmc:Mmcs_2847 protein of unknown function DUF1290; hypothetical protein complement(3334921..3335274) Mycobacterium vanbaalenii PYR-1 4646168 YP_953947.1 CDS Mvan_3139 NC_008726.1 3335285 3336178 R PFAM: protein of unknown function DUF881; KEGG: mmc:Mmcs_2848 protein of unknown function DUF881; hypothetical protein complement(3335285..3336178) Mycobacterium vanbaalenii PYR-1 4646169 YP_953948.1 CDS Mvan_3140 NC_008726.1 3336175 3336759 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2849 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(3336175..3336759) Mycobacterium vanbaalenii PYR-1 4646372 YP_953949.1 CDS Mvan_3141 NC_008726.1 3337004 3337705 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0571 ABC transporter related; ABC transporter--like protein 3337004..3337705 Mycobacterium vanbaalenii PYR-1 4646373 YP_953950.1 CDS Mvan_3142 NC_008726.1 3337702 3338496 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_2832 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 3337702..3338496 Mycobacterium vanbaalenii PYR-1 4646374 YP_953951.1 CDS Mvan_3143 NC_008726.1 3338608 3339759 D KEGG: cyb:CYB_2391 putative secreted protein; hypothetical protein 3338608..3339759 Mycobacterium vanbaalenii PYR-1 4646375 YP_953952.1 CDS Mvan_3144 NC_008726.1 3339777 3340847 D hypothetical protein 3339777..3340847 Mycobacterium vanbaalenii PYR-1 4646376 YP_953953.1 CDS Mvan_3145 NC_008726.1 3340844 3342271 D PFAM: aldehyde dehydrogenase; KEGG: hal:VNG0937G glyceraldehyde-3-phosphate dehydrogenase; aldehyde dehydrogenase 3340844..3342271 Mycobacterium vanbaalenii PYR-1 4646377 YP_953954.1 CDS Mvan_3146 NC_008726.1 3342315 3343541 D PFAM: aminotransferase class-III; KEGG: gsu:GSU0151 acetylornithine aminotransferase; class III aminotransferase 3342315..3343541 Mycobacterium vanbaalenii PYR-1 4646378 YP_953955.1 CDS Mvan_3147 NC_008726.1 3343538 3344962 D PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cvi:CV1032 N-ethylammeline chlorohydrolase; amidohydrolase 3343538..3344962 Mycobacterium vanbaalenii PYR-1 4646379 YP_953956.1 CDS Mvan_3148 NC_008726.1 3344971 3346554 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa17530 putative dehydrogenase; amine oxidase 3344971..3346554 Mycobacterium vanbaalenii PYR-1 4646380 YP_953957.1 CDS Mvan_3149 NC_008726.1 3346551 3347534 D PFAM: O-methyltransferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_1733 O-methyltransferase, family 2; type 12 methyltransferase 3346551..3347534 Mycobacterium vanbaalenii PYR-1 4646381 YP_953958.1 CDS Mvan_3150 NC_008726.1 3347518 3348996 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cyb:CYB_1536 amidohydrolase family protein; amidohydrolase complement(3347518..3348996) Mycobacterium vanbaalenii PYR-1 4646382 YP_953959.1 CDS Mvan_3151 NC_008726.1 3348989 3349876 R PFAM: polysaccharide deacetylase; KEGG: bbr:BB0695 putative polysaccharide deacetylase; polysaccharide deacetylase complement(3348989..3349876) Mycobacterium vanbaalenii PYR-1 4646383 YP_953960.1 CDS Mvan_3152 NC_008726.1 3349873 3351294 R PFAM: FAD dependent oxidoreductase; KEGG: gox:GOX0905 putative oxidoreductase; FAD dependent oxidoreductase complement(3349873..3351294) Mycobacterium vanbaalenii PYR-1 4646384 YP_953961.1 CDS Mvan_3153 NC_008726.1 3351291 3352529 R PFAM: Amidase; KEGG: bbr:BB0694 probable amidase; amidase complement(3351291..3352529) Mycobacterium vanbaalenii PYR-1 4646385 YP_953962.1 CDS Mvan_3154 NC_008726.1 3352526 3353410 R PFAM: polysaccharide deacetylase; KEGG: bbr:BB1148 hypothetical protein; polysaccharide deacetylase complement(3352526..3353410) Mycobacterium vanbaalenii PYR-1 4646386 YP_953963.1 CDS Mvan_3155 NC_008726.1 3353407 3354501 R PFAM: Amidase; KEGG: rpb:RPB_2085 amidase; amidase complement(3353407..3354501) Mycobacterium vanbaalenii PYR-1 4646387 YP_953964.1 CDS Mvan_3156 NC_008726.1 3354582 3355997 R PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: nfa:nfa20870 putative 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase complement(3354582..3355997) Mycobacterium vanbaalenii PYR-1 4646388 YP_953965.1 CDS Mvan_3157 NC_008726.1 3356028 3357002 R KEGG: pol:Bpro_1912 4,5-dihydroxyphthalate decarboxylase; 4,5-dihydroxyphthalate decarboxylase complement(3356028..3357002) Mycobacterium vanbaalenii PYR-1 4646389 YP_953966.1 CDS Mvan_3158 NC_008726.1 3356999 3357931 R PFAM: regulatory protein GntR, HTH; KEGG: rxy:Rxyl_0898 transcriptional regulator, GntR family; regulatory protein GntR complement(3356999..3357931) Mycobacterium vanbaalenii PYR-1 4646390 YP_953967.1 CDS Mvan_3159 NC_008726.1 3357931 3359274 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mma:MM2279 N-ethylammeline chlorohydrolase; amidohydrolase complement(3357931..3359274) Mycobacterium vanbaalenii PYR-1 4646391 YP_953968.1 CDS Mvan_3160 NC_008726.1 3359271 3360122 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xtr:549387 nitrilase family, member 2 Pfam: CN_hydrolase PROSITE: CN_HYDROLASE; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3359271..3360122) Mycobacterium vanbaalenii PYR-1 4646392 YP_953969.1 CDS Mvan_3161 NC_008726.1 3360289 3361320 D PFAM: putative ammonia monooxygenase; KEGG: mmc:Mmcs_1243 putative ammonia monooxygenase; putative ammonia monooxygenase 3360289..3361320 Mycobacterium vanbaalenii PYR-1 4646393 YP_953970.1 CDS Mvan_3162 NC_008726.1 3361325 3363742 R SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3361325..3363742) Mycobacterium vanbaalenii PYR-1 4646394 YP_953971.1 CDS Mvan_3163 NC_008726.1 3363829 3365727 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2853 ABC transporter related; ABC transporter 3363829..3365727 Mycobacterium vanbaalenii PYR-1 4646395 YP_953972.1 CDS Mvan_3164 NC_008726.1 3365774 3367687 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2854 ABC transporter-like protein; ABC transporter 3365774..3367687 Mycobacterium vanbaalenii PYR-1 4646396 YP_953973.1 CDS Mvan_3165 NC_008726.1 3367684 3369261 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2856 fumarate reductase/succinate dehydrogenase flavoprotein-like protein; hypothetical protein complement(3367684..3369261) Mycobacterium vanbaalenii PYR-1 4644155 YP_953974.1 CDS Mvan_3166 NC_008726.1 3369264 3369740 R KEGG: mmc:Mmcs_2857 hypothetical protein; hypothetical protein complement(3369264..3369740) Mycobacterium vanbaalenii PYR-1 4644156 YP_953975.1 CDS Mvan_3167 NC_008726.1 3369786 3370496 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP1528 hypothetical protein; TetR family transcriptional regulator complement(3369786..3370496) Mycobacterium vanbaalenii PYR-1 4644157 YP_953976.1 CDS Mvan_3168 NC_008726.1 3370589 3371026 D KEGG: mmc:Mmcs_2859 hypothetical protein; hypothetical protein 3370589..3371026 Mycobacterium vanbaalenii PYR-1 4644158 YP_953977.1 CDS Mvan_3169 NC_008726.1 3371023 3371724 R KEGG: mmc:Mmcs_2860 hypothetical protein; hypothetical protein complement(3371023..3371724) Mycobacterium vanbaalenii PYR-1 4644159 YP_953978.1 CDS Mvan_3170 NC_008726.1 3371806 3373239 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_2861 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(3371806..3373239) Mycobacterium vanbaalenii PYR-1 4644160 YP_953979.1 CDS Mvan_3171 NC_008726.1 3373226 3374143 R KEGG: mmc:Mmcs_2864 sterol desaturase-related protein; sterol desaturase--like protein complement(3373226..3374143) Mycobacterium vanbaalenii PYR-1 4644161 YP_953980.1 CDS Mvan_3172 NC_008726.1 3374174 3375745 R PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2865 carboxylesterase, type B; carboxylesterase complement(3374174..3375745) Mycobacterium vanbaalenii PYR-1 4644162 YP_953981.1 CDS Mvan_3173 NC_008726.1 3375870 3377117 D PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3488 acyl-CoA dehydrogenase, type 2-like protein; acyl-CoA dehydrogenase type 2 3375870..3377117 Mycobacterium vanbaalenii PYR-1 4644163 YP_953982.1 CDS Mvan_3174 NC_008726.1 3377134 3378324 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2868 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(3377134..3378324) Mycobacterium vanbaalenii PYR-1 4644164 YP_953983.1 CDS Mvan_3175 NC_008726.1 3378354 3380546 D KEGG: mmc:Mmcs_2869 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 3378354..3380546 Mycobacterium vanbaalenii PYR-1 4644165 YP_953984.1 CDS Mvan_3176 NC_008726.1 3380562 3382367 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein complement(3380562..3382367) Mycobacterium vanbaalenii PYR-1 4644166 YP_953985.1 CDS Mvan_3177 NC_008726.1 3382402 3383502 R KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein complement(3382402..3383502) Mycobacterium vanbaalenii PYR-1 4644167 YP_953986.1 CDS Mvan_3178 NC_008726.1 3383655 3384140 D KEGG: mmc:Mmcs_2870 hypothetical protein; hypothetical protein 3383655..3384140 Mycobacterium vanbaalenii PYR-1 4644168 YP_953987.1 CDS Mvan_3179 NC_008726.1 3384224 3385126 D KEGG: mmc:Mmcs_2874 hypothetical protein; hypothetical protein 3384224..3385126 Mycobacterium vanbaalenii PYR-1 4644169 YP_953988.1 CDS Mvan_3180 NC_008726.1 3385123 3386220 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_2875 ferredoxin; ferredoxin 3385123..3386220 Mycobacterium vanbaalenii PYR-1 4644170 YP_953989.1 CDS Mvan_3181 NC_008726.1 3386225 3386785 D KEGG: mmc:Mmcs_2878 hypothetical protein; hypothetical protein 3386225..3386785 Mycobacterium vanbaalenii PYR-1 4644171 YP_953990.1 CDS Mvan_3182 NC_008726.1 3386640 3387131 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_2879 NUDIX hydrolase; NUDIX hydrolase complement(3386640..3387131) Mycobacterium vanbaalenii PYR-1 4644172 YP_953991.1 CDS Mvan_3183 NC_008726.1 3387183 3387953 D PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_2884 lipolytic enzyme, G-D-S-L; GDSL family lipase 3387183..3387953 Mycobacterium vanbaalenii PYR-1 4644173 YP_953992.1 CDS Mvan_3184 NC_008726.1 3387975 3388559 R KEGG: mmc:Mmcs_2886 hypothetical protein; hypothetical protein complement(3387975..3388559) Mycobacterium vanbaalenii PYR-1 4644174 YP_953993.1 CDS Mvan_3185 NC_008726.1 3388638 3389444 R PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_2888 nuclear transport factor 2; nuclear transport factor 2 complement(3388638..3389444) Mycobacterium vanbaalenii PYR-1 4644175 YP_953994.1 CDS Mvan_3186 NC_008726.1 3389511 3389948 D KEGG: mmc:Mmcs_2889 hypothetical protein; hypothetical protein 3389511..3389948 Mycobacterium vanbaalenii PYR-1 4644176 YP_953995.1 CDS Mvan_3187 NC_008726.1 3389928 3391118 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_5154 cytochrome P450; cytochrome P450 complement(3389928..3391118) Mycobacterium vanbaalenii PYR-1 4644177 YP_953996.1 CDS Mvan_3188 NC_008726.1 3391340 3391768 D PFAM: Mycobacterium membrane family protein; KEGG: mmc:Mmcs_5175 Mycobacterium membrane; hypothetical protein 3391340..3391768 Mycobacterium vanbaalenii PYR-1 4644178 YP_953997.1 CDS Mvan_3189 NC_008726.1 3391765 3394671 D TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein; transporter 3391765..3394671 Mycobacterium vanbaalenii PYR-1 4644179 YP_953998.1 CDS Mvan_3190 NC_008726.1 3394668 3394994 D PFAM: protein of unknown function DUF732; KEGG: mmc:Mmcs_5069 protein of unknown function DUF732; hypothetical protein 3394668..3394994 Mycobacterium vanbaalenii PYR-1 4644180 YP_953999.1 CDS Mvan_3191 NC_008726.1 3395098 3395568 R KEGG: mmc:Mmcs_5070 putative secreted protein; hypothetical protein complement(3395098..3395568) Mycobacterium vanbaalenii PYR-1 4648469 YP_954000.1 CDS Mvan_3192 NC_008726.1 3395665 3395940 R KEGG: mmc:Mmcs_5071 hypothetical protein; hypothetical protein complement(3395665..3395940) Mycobacterium vanbaalenii PYR-1 4648470 YP_954001.1 CDS Mvan_3193 NC_008726.1 3396086 3397360 D PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_0508 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3396086..3397360 Mycobacterium vanbaalenii PYR-1 4648471 YP_954002.1 CDS Mvan_3194 NC_008726.1 3397364 3398518 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5211 acyl-CoA dehydrogenase, type 2-like protein; acyl-CoA dehydrogenase type 2 complement(3397364..3398518) Mycobacterium vanbaalenii PYR-1 4648472 YP_954003.1 CDS Mvan_3195 NC_008726.1 3398546 3399388 R KEGG: mmc:Mmcs_0431 hypothetical protein; hypothetical protein complement(3398546..3399388) Mycobacterium vanbaalenii PYR-1 4648473 YP_954004.1 CDS Mvan_3196 NC_008726.1 3399744 3401183 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: nfa:nfa21860 putative ethanolamine permease; ethanolamine transporter 3399744..3401183 Mycobacterium vanbaalenii PYR-1 4648474 YP_954005.1 CDS Mvan_3197 NC_008726.1 3401180 3402589 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: nfa:nfa21870 putative ethanolamine ammonia-lyase large subunit; ethanolamine ammonia lyase large subunit 3401180..3402589 Mycobacterium vanbaalenii PYR-1 4648475 YP_954006.1 CDS Mvan_3198 NC_008726.1 3402586 3403338 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 3402586..3403338 Mycobacterium vanbaalenii PYR-1 4648476 YP_954007.1 CDS Mvan_3199 NC_008726.1 3403304 3403981 R KEGG: ade:Adeh_1681 PE-PGRS family protein; PE-PGRS family protein complement(3403304..3403981) Mycobacterium vanbaalenii PYR-1 4648477 YP_954008.1 CDS Mvan_3200 NC_008726.1 3403998 3406355 R PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: mmc:Mmcs_3402 RNA binding S1; RNA-binding S1 domain-containing protein complement(3403998..3406355) Mycobacterium vanbaalenii PYR-1 4648478 YP_954009.1 CDS Mvan_3201 NC_008726.1 3406538 3408685 D PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: sma:SAV348 putative catalase; catalase 3406538..3408685 Mycobacterium vanbaalenii PYR-1 4648479 YP_954010.1 CDS Mvan_3202 NC_008726.1 3408763 3409416 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mmc:Mmcs_2993 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase--like protein 3408763..3409416 Mycobacterium vanbaalenii PYR-1 4648480 YP_954011.1 CDS Mvan_3204 NC_008726.1 3411630 3412334 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mmc:Mmcs_4514 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 3411630..3412334 Mycobacterium vanbaalenii PYR-1 4648482 YP_954012.1 CDS Mvan_3205 NC_008726.1 3412345 3413490 R PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3246 hypothetical protein; group 1 glycosyl transferase complement(3412345..3413490) Mycobacterium vanbaalenii PYR-1 4648483 YP_954013.1 CDS Mvan_3206 NC_008726.1 3413655 3414431 D PFAM: CheB methylesterase; KEGG: mpa:MAP3235c putative protein-glutamate methyltransferase protein; CheB methylesterase 3413655..3414431 Mycobacterium vanbaalenii PYR-1 4648484 YP_954014.1 CDS Mvan_3207 NC_008726.1 3414571 3415416 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3234c hypothetical protein; anti-sigma-factor antagonist 3414571..3415416 Mycobacterium vanbaalenii PYR-1 4648485 YP_954015.1 CDS Mvan_3208 NC_008726.1 3415427 3417670 R KEGG: mmc:Mmcs_2682 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI complement(3415427..3417670) Mycobacterium vanbaalenii PYR-1 4648486 YP_954016.1 CDS Mvan_3209 NC_008726.1 3417696 3418139 R PFAM: ferric-uptake regulator; KEGG: mbo:Mb1944c ferric uptake regulation protein FurA (fur); ferric uptake regulator family protein complement(3417696..3418139) Mycobacterium vanbaalenii PYR-1 4648487 YP_954017.1 CDS Mvan_3210 NC_008726.1 3418438 3419736 R KEGG: mmc:Mmcs_2903 hypothetical protein; hypothetical protein complement(3418438..3419736) Mycobacterium vanbaalenii PYR-1 4648488 YP_954018.1 CDS Mvan_3211 NC_008726.1 3419789 3420772 R KEGG: bpa:BPP0732 hypothetical protein; hypothetical protein complement(3419789..3420772) Mycobacterium vanbaalenii PYR-1 4648489 YP_954019.1 CDS Mvan_3212 NC_008726.1 3420918 3423158 R KEGG: mmc:Mmcs_1209 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase complement(3420918..3423158) Mycobacterium vanbaalenii PYR-1 4648490 YP_954020.1 CDS Mvan_3213 NC_008726.1 3423694 3424245 D KEGG: mpa:MAP3837c LpqJ; protein LpqJ 3423694..3424245 Mycobacterium vanbaalenii PYR-1 4648491 YP_954021.1 CDS Mvan_3214 NC_008726.1 3424278 3424616 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: sco:SCO4689 hypothetical protein; cupin 3424278..3424616 Mycobacterium vanbaalenii PYR-1 4648492 YP_954022.1 CDS Mvan_3215 NC_008726.1 3424703 3425353 D KEGG: mmc:Mmcs_2904 hypothetical protein; hypothetical protein 3424703..3425353 Mycobacterium vanbaalenii PYR-1 4648493 YP_954023.1 CDS Mvan_3216 NC_008726.1 3425355 3427244 R PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rba:RB8838 probable nucleotide pyrophosphatase homolog; type I phosphodiesterase/nucleotide pyrophosphatase complement(3425355..3427244) Mycobacterium vanbaalenii PYR-1 4647616 YP_954024.1 CDS Mvan_3217 NC_008726.1 3427345 3427632 R PFAM: regulatory protein, ArsR; KEGG: fra:Francci3_3239 transcriptional regulator, ArsR family; regulatory protein ArsR complement(3427345..3427632) Mycobacterium vanbaalenii PYR-1 4647617 YP_954025.1 CDS Mvan_3218 NC_008726.1 3427719 3429044 D KEGG: sco:SCO6811 secreted protein; secreted protein 3427719..3429044 Mycobacterium vanbaalenii PYR-1 4647618 YP_954026.1 CDS Mvan_3219 NC_008726.1 3429037 3430224 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4221 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3429037..3430224 Mycobacterium vanbaalenii PYR-1 4647619 YP_954027.1 CDS Mvan_3220 NC_008726.1 3430199 3430627 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:pnf2260 putative arsenate reductase; protein tyrosine phosphatase complement(3430199..3430627) Mycobacterium vanbaalenii PYR-1 4647620 YP_954028.1 CDS Mvan_3221 NC_008726.1 3430632 3431303 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:pnf2270 putative arsenate reductase; protein tyrosine phosphatase complement(3430632..3431303) Mycobacterium vanbaalenii PYR-1 4647621 YP_954029.1 CDS Mvan_3222 NC_008726.1 3431296 3432399 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mmc:Mmcs_4522 arsenical-resistance protein; arsenical-resistance protein complement(3431296..3432399) Mycobacterium vanbaalenii PYR-1 4647622 YP_954030.1 CDS Mvan_3223 NC_008726.1 3432396 3432764 R PFAM: regulatory protein, ArsR; KEGG: mbo:Mb2675 possible transcriptional regulatory protein (probably arsR-family); regulatory protein ArsR complement(3432396..3432764) Mycobacterium vanbaalenii PYR-1 4647623 YP_954031.1 CDS Mvan_3224 NC_008726.1 3432860 3433270 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_1488 transcriptional regulator, ArsR family; regulatory protein ArsR 3432860..3433270 Mycobacterium vanbaalenii PYR-1 4647624 YP_954032.1 CDS Mvan_3225 NC_008726.1 3433267 3434337 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmc:Mmcs_1489 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 3433267..3434337 Mycobacterium vanbaalenii PYR-1 4647625 YP_954033.1 CDS Mvan_3226 NC_008726.1 3434369 3434971 R PFAM: cobalt transport protein; KEGG: mmc:Mmcs_5279 cobalt transport protein; cobalt transport protein complement(3434369..3434971) Mycobacterium vanbaalenii PYR-1 4647627 YP_954034.1 CDS Mvan_3227 NC_008726.1 3434968 3435663 R PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_5280 ABC transporter related; ABC transporter--like protein complement(3434968..3435663) Mycobacterium vanbaalenii PYR-1 4647628 YP_954035.1 CDS Mvan_3228 NC_008726.1 3435656 3436261 R PFAM: BioY protein; KEGG: mmc:Mmcs_5281 BioY protein; BioY protein complement(3435656..3436261) Mycobacterium vanbaalenii PYR-1 4647629 YP_954036.1 CDS Mvan_3229 NC_008726.1 3436323 3437306 R KEGG: mtc:MT0636 hypothetical protein; hypothetical protein complement(3436323..3437306) Mycobacterium vanbaalenii PYR-1 4647630 YP_954037.1 CDS Mvan_3230 NC_008726.1 3437485 3438555 D KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein 3437485..3438555 Mycobacterium vanbaalenii PYR-1 4647631 YP_954038.1 CDS Mvan_3231 NC_008726.1 3438586 3440118 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_1730 protein of unknown function DUF222; hypothetical protein 3438586..3440118 Mycobacterium vanbaalenii PYR-1 4647632 YP_954039.1 CDS Mvan_3232 NC_008726.1 3441430 3442026 R KEGG: mmc:Mmcs_1159 hypothetical protein; hypothetical protein complement(3441430..3442026) Mycobacterium vanbaalenii PYR-1 4647633 YP_954040.1 CDS Mvan_3233 NC_008726.1 3442200 3442583 R KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein complement(3442200..3442583) Mycobacterium vanbaalenii PYR-1 4647634 YP_954041.1 CDS Mvan_3234 NC_008726.1 3442647 3442928 R KEGG: fra:Francci3_2227 conserved hypothetical protein; hypothetical protein complement(3442647..3442928) Mycobacterium vanbaalenii PYR-1 4647635 YP_954042.1 CDS Mvan_3236 NC_008726.1 3445133 3445459 D KEGG: nfa:pnf2590 putative alkylmercury lyase; putative alkylmercury lyase 3445133..3445459 Mycobacterium vanbaalenii PYR-1 4647637 YP_954043.1 CDS Mvan_3237 NC_008726.1 3445507 3446193 R PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase; DSBA oxidoreductase complement(3445507..3446193) Mycobacterium vanbaalenii PYR-1 4647638 YP_954044.1 CDS Mvan_3238 NC_008726.1 3446218 3446601 D PFAM: regulatory protein, ArsR; KEGG: dra:DRA0071 transcriptional repressor SmtB; Fis family transcriptional regulator 3446218..3446601 Mycobacterium vanbaalenii PYR-1 4647639 YP_954045.1 CDS Mvan_3239 NC_008726.1 3446743 3447087 D KEGG: mmc:Mmcs_1470 hypothetical protein; hypothetical protein 3446743..3447087 Mycobacterium vanbaalenii PYR-1 4644644 YP_954046.1 CDS Mvan_3240 NC_008726.1 3447136 3447732 R PFAM: Redoxin domain protein; KEGG: nfa:nfa51580 putative cytochrome c biogenesis protein; redoxin domain-containing protein complement(3447136..3447732) Mycobacterium vanbaalenii PYR-1 4644645 YP_954047.1 CDS Mvan_3241 NC_008726.1 3447791 3448390 R PFAM: cadmium resistance transporter; KEGG: cgb:cg1033 cadmium resistance transporter; cadmium resistance transporter complement(3447791..3448390) Mycobacterium vanbaalenii PYR-1 4644646 YP_954048.1 CDS Mvan_3242 NC_008726.1 3448458 3450425 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nfa:pnf1330 putative cation-transporting ATPase; heavy metal translocating P-type ATPase complement(3448458..3450425) Mycobacterium vanbaalenii PYR-1 4644647 YP_954049.1 CDS Mvan_3243 NC_008726.1 3450422 3450829 R PFAM: regulatory protein, ArsR; KEGG: nfa:pnf1320 putative transcriptional regulator; regulatory protein ArsR complement(3450422..3450829) Mycobacterium vanbaalenii PYR-1 4644648 YP_954050.1 CDS Mvan_3244 NC_008726.1 3451236 3451862 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1988 hypothetical methyltransferase; type 11 methyltransferase 3451236..3451862 Mycobacterium vanbaalenii PYR-1 4644649 YP_954051.1 CDS Mvan_3245 NC_008726.1 3451859 3452506 D KEGG: nfa:pnf1430 hypothetical protein; hypothetical protein 3451859..3452506 Mycobacterium vanbaalenii PYR-1 4644650 YP_954052.1 CDS Mvan_3246 NC_008726.1 3452796 3452969 R hypothetical protein complement(3452796..3452969) Mycobacterium vanbaalenii PYR-1 4644651 YP_954053.1 CDS Mvan_3247 NC_008726.1 3453438 3453629 D hypothetical protein 3453438..3453629 Mycobacterium vanbaalenii PYR-1 4644652 YP_954054.1 CDS Mvan_3248 NC_008726.1 3453658 3453933 R hypothetical protein complement(3453658..3453933) Mycobacterium vanbaalenii PYR-1 4644653 YP_954055.1 CDS Mvan_3249 NC_008726.1 3453950 3454183 R hypothetical protein complement(3453950..3454183) Mycobacterium vanbaalenii PYR-1 4644654 YP_954056.1 CDS Mvan_3250 NC_008726.1 3454269 3454709 R hypothetical protein complement(3454269..3454709) Mycobacterium vanbaalenii PYR-1 4644655 YP_954057.1 CDS Mvan_3251 NC_008726.1 3454706 3455521 R Fis family transcriptional regulator complement(3454706..3455521) Mycobacterium vanbaalenii PYR-1 4644656 YP_954058.1 CDS Mvan_3253 NC_008726.1 3456784 3457260 R KEGG: mmc:Mmcs_1431 hypothetical protein; hypothetical protein complement(3456784..3457260) Mycobacterium vanbaalenii PYR-1 4644658 YP_954059.1 CDS Mvan_3254 NC_008726.1 3457523 3462112 D KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein; exonuclease V subunit alpha 3457523..3462112 Mycobacterium vanbaalenii PYR-1 4644659 YP_954060.1 CDS Mvan_3255 NC_008726.1 3462197 3462508 D hypothetical protein 3462197..3462508 Mycobacterium vanbaalenii PYR-1 4644660 YP_954061.1 CDS Mvan_3256 NC_008726.1 3462516 3462926 D PFAM: helix-turn-helix domain protein; KEGG: rru:Rru_A3411 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 3462516..3462926 Mycobacterium vanbaalenii PYR-1 4644661 YP_954062.1 CDS Mvan_3257 NC_008726.1 3462936 3463697 R KEGG: mmc:Mmcs_1429 hypothetical protein; hypothetical protein complement(3462936..3463697) Mycobacterium vanbaalenii PYR-1 4644662 YP_954063.1 CDS Mvan_3258 NC_008726.1 3463694 3466129 R KEGG: mmc:Mmcs_1428 hypothetical protein; hypothetical protein complement(3463694..3466129) Mycobacterium vanbaalenii PYR-1 4644663 YP_954064.1 CDS Mvan_3259 NC_008726.1 3466129 3466656 R KEGG: mmc:Mmcs_1427 hypothetical protein; hypothetical protein complement(3466129..3466656) Mycobacterium vanbaalenii PYR-1 4644664 YP_954065.1 CDS Mvan_3260 NC_008726.1 3466821 3467468 R hypothetical protein complement(3466821..3467468) Mycobacterium vanbaalenii PYR-1 4644665 YP_954066.1 CDS Mvan_3261 NC_008726.1 3467468 3468052 R PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: xfa:XF2028 DNA invertase; resolvase domain-containing protein complement(3467468..3468052) Mycobacterium vanbaalenii PYR-1 4644666 YP_954067.1 CDS Mvan_3262 NC_008726.1 3468318 3469076 D PFAM: CopG domain protein DNA-binding domain protein; YfbU family protein; KEGG: blo:BL0816 hypothetical protein; YfbU family protein 3468318..3469076 Mycobacterium vanbaalenii PYR-1 4644667 YP_954068.1 CDS Mvan_3263 NC_008726.1 3469620 3470201 D hypothetical protein 3469620..3470201 Mycobacterium vanbaalenii PYR-1 4644668 YP_954069.1 CDS Mvan_3264 NC_008726.1 3470416 3471945 D KEGG: sth:STH275 transposase; transposase 3470416..3471945 Mycobacterium vanbaalenii PYR-1 4644669 YP_954070.1 CDS Mvan_3265 NC_008726.1 3471942 3472739 D PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pca:Pcar_0791 IS21 family transposase; IstB ATP binding domain-containing protein 3471942..3472739 Mycobacterium vanbaalenii PYR-1 4644481 YP_954071.1 CDS Mvan_3267 NC_008726.1 3474548 3475795 R PFAM: transposase, mutator type; KEGG: mmc:Mmcs_5364 transposase, mutator type; transposase, mutator type complement(3474548..3475795) Mycobacterium vanbaalenii PYR-1 4644483 YP_954072.1 CDS Mvan_3268 NC_008726.1 3475993 3476307 D PFAM: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A4980 transcriptional regulator, XRE family; XRE family transcriptional regulator 3475993..3476307 Mycobacterium vanbaalenii PYR-1 4644484 YP_954073.1 CDS Mvan_3269 NC_008726.1 3476944 3478341 D PFAM: phage integrase family protein; KEGG: fra:Francci3_0114 phage integrase; phage integrase family protein 3476944..3478341 Mycobacterium vanbaalenii PYR-1 4644485 YP_954074.1 CDS Mvan_3270 NC_008726.1 3478632 3480116 D PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: mmc:Mmcs_2924 deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase--like protein 3478632..3480116 Mycobacterium vanbaalenii PYR-1 4644487 YP_954075.1 CDS Mvan_3271 NC_008726.1 3480096 3481010 R PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_2926 protein of unknown function DUF81; hypothetical protein complement(3480096..3481010) Mycobacterium vanbaalenii PYR-1 4644488 YP_954076.1 CDS Mvan_3272 NC_008726.1 3481221 3482003 R PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_2925 protein of unknown function DUF81; hypothetical protein complement(3481221..3482003) Mycobacterium vanbaalenii PYR-1 4644489 YP_954077.1 CDS Mvan_3273 NC_008726.1 3482093 3482407 D KEGG: nfa:nfa20730 hypothetical protein; hypothetical protein 3482093..3482407 Mycobacterium vanbaalenii PYR-1 4644490 YP_954078.1 CDS engA NC_008726.1 3482455 3483867 R synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3482455..3483867) Mycobacterium vanbaalenii PYR-1 4644491 YP_954079.1 CDS cmk NC_008726.1 3483864 3484550 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(3483864..3484550) Mycobacterium vanbaalenii PYR-1 4644492 YP_954080.1 CDS Mvan_3276 NC_008726.1 3484547 3485290 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mmc:Mmcs_2929 pseudouridine synthase, Rsu; pseudouridine synthase complement(3484547..3485290) Mycobacterium vanbaalenii PYR-1 4644493 YP_954081.1 CDS Mvan_3277 NC_008726.1 3485293 3486018 R TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mmc:Mmcs_2930 putative transcriptional regulator; putative transcriptional regulator complement(3485293..3486018) Mycobacterium vanbaalenii PYR-1 4644494 YP_954082.1 CDS Mvan_3278 NC_008726.1 3486027 3486851 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: mmc:Mmcs_2931 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(3486027..3486851) Mycobacterium vanbaalenii PYR-1 4644495 YP_954083.1 CDS Mvan_3279 NC_008726.1 3486848 3487744 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmc:Mmcs_2932 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(3486848..3487744) Mycobacterium vanbaalenii PYR-1 4644496 YP_954084.1 CDS Mvan_3280 NC_008726.1 3487869 3488603 D PFAM: O-methyltransferase, family 3; KEGG: mtc:MT1743 catechol-O-methyltransferase; catechol O-methyltransferase 3487869..3488603 Mycobacterium vanbaalenii PYR-1 4644497 YP_954085.1 CDS xerD NC_008726.1 3488600 3489553 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3488600..3489553) Mycobacterium vanbaalenii PYR-1 4644498 YP_954086.1 CDS Mvan_3282 NC_008726.1 3489550 3490185 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_2943 NUDIX hydrolase; NUDIX hydrolase complement(3489550..3490185) Mycobacterium vanbaalenii PYR-1 4644499 YP_954087.1 CDS pyrG NC_008726.1 3490178 3491929 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3490178..3491929) Mycobacterium vanbaalenii PYR-1 4644500 YP_954088.1 CDS Mvan_3284 NC_008726.1 3492053 3492994 R KEGG: mmc:Mmcs_2945 hypothetical protein; hypothetical protein complement(3492053..3492994) Mycobacterium vanbaalenii PYR-1 4644501 YP_954089.1 CDS Mvan_3285 NC_008726.1 3493005 3494189 R KEGG: mmc:Mmcs_2946 hypothetical protein; hypothetical protein complement(3493005..3494189) Mycobacterium vanbaalenii PYR-1 4644502 YP_954090.1 CDS Mvan_3286 NC_008726.1 3494282 3494665 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_2947 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3494282..3494665) Mycobacterium vanbaalenii PYR-1 4644503 YP_954091.1 CDS Mvan_3287 NC_008726.1 3494698 3495285 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2948 transcriptional regulator, TetR family; TetR family transcriptional regulator 3494698..3495285 Mycobacterium vanbaalenii PYR-1 4644504 YP_954092.1 CDS Mvan_3288 NC_008726.1 3495289 3497064 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mmc:Mmcs_2949 DNA repair protein RecN; DNA repair protein RecN complement(3495289..3497064) Mycobacterium vanbaalenii PYR-1 4644868 YP_954093.1 CDS ppnK NC_008726.1 3497064 3497984 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(3497064..3497984) Mycobacterium vanbaalenii PYR-1 4644869 YP_954094.1 CDS Mvan_3290 NC_008726.1 3497981 3498790 R TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mmc:Mmcs_2951 hemolysin A; hemolysin A complement(3497981..3498790) Mycobacterium vanbaalenii PYR-1 4644870 YP_954095.1 CDS Mvan_3291 NC_008726.1 3498796 3498960 R KEGG: mmc:Mmcs_2952 hypothetical protein; hypothetical protein complement(3498796..3498960) Mycobacterium vanbaalenii PYR-1 4644871 YP_954096.1 CDS Mvan_3292 NC_008726.1 3498962 3499975 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_2953 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase complement(3498962..3499975) Mycobacterium vanbaalenii PYR-1 4644872 YP_954097.1 CDS Mvan_3293 NC_008726.1 3499977 3500834 R KEGG: mmc:Mmcs_2954 hypothetical protein; hypothetical protein complement(3499977..3500834) Mycobacterium vanbaalenii PYR-1 4644873 YP_954098.1 CDS Mvan_3294 NC_008726.1 3506671 3507945 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3506671..3507945) Mycobacterium vanbaalenii PYR-1 4644877 YP_954099.1 CDS Mvan_3295 NC_008726.1 3507964 3508575 R responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase complement(3507964..3508575) Mycobacterium vanbaalenii PYR-1 4644878 YP_954100.1 CDS Mvan_3296 NC_008726.1 3508634 3509398 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2957 ABC transporter related; ABC transporter--like protein 3508634..3509398 Mycobacterium vanbaalenii PYR-1 4644879 YP_954101.1 CDS Mvan_3297 NC_008726.1 3509395 3510150 D TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mpa:MAP1392c ABC-2 type transport system permease protein; multidrug ABC transporter inner membrane protein 3509395..3510150 Mycobacterium vanbaalenii PYR-1 4644880 YP_954102.1 CDS Mvan_3298 NC_008726.1 3510156 3510776 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2959 transcriptional regulator, TetR family; TetR family transcriptional regulator 3510156..3510776 Mycobacterium vanbaalenii PYR-1 4644881 YP_954103.1 CDS Mvan_3299 NC_008726.1 3510758 3510973 R PFAM: protein of unknown function DUF343; KEGG: mmc:Mmcs_2960 protein of unknown function DUF343; hypothetical protein complement(3510758..3510973) Mycobacterium vanbaalenii PYR-1 4644882 YP_954104.1 CDS Mvan_3300 NC_008726.1 3510978 3511508 R KEGG: mmc:Mmcs_2961 hypothetical protein; hypothetical protein complement(3510978..3511508) Mycobacterium vanbaalenii PYR-1 4644883 YP_954105.1 CDS Mvan_3301 NC_008726.1 3511562 3514537 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3511562..3514537) Mycobacterium vanbaalenii PYR-1 4644884 YP_954106.1 CDS Mvan_3302 NC_008726.1 3514698 3516518 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbo:Mb1695c macrolide-transport ATP-binding protein ABC transporter; ABC transporter--like protein 3514698..3516518 Mycobacterium vanbaalenii PYR-1 4644885 YP_954107.1 CDS Mvan_3303 NC_008726.1 3516519 3517805 D KEGG: bbr:BB1601 hypothetical protein; hypothetical protein 3516519..3517805 Mycobacterium vanbaalenii PYR-1 4644886 YP_954108.1 CDS Mvan_3304 NC_008726.1 3517783 3518286 R hypothetical protein complement(3517783..3518286) Mycobacterium vanbaalenii PYR-1 4644887 YP_954109.1 CDS Mvan_3305 NC_008726.1 3518283 3518846 R hypothetical protein complement(3518283..3518846) Mycobacterium vanbaalenii PYR-1 4644888 YP_954110.1 CDS Mvan_3306 NC_008726.1 3518843 3519472 R hypothetical protein complement(3518843..3519472) Mycobacterium vanbaalenii PYR-1 4644889 YP_954111.1 CDS Mvan_3307 NC_008726.1 3519484 3520896 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(3519484..3520896) Mycobacterium vanbaalenii PYR-1 4644890 YP_954112.1 CDS Mvan_3308 NC_008726.1 3520925 3522127 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(3520925..3522127) Mycobacterium vanbaalenii PYR-1 4644505 YP_954113.1 CDS Mvan_3309 NC_008726.1 3522155 3522640 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(3522155..3522640) Mycobacterium vanbaalenii PYR-1 4644506 YP_954114.1 CDS Mvan_3310 NC_008726.1 3522657 3523580 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(3522657..3523580) Mycobacterium vanbaalenii PYR-1 4644507 YP_954115.1 CDS argD NC_008726.1 3523577 3524749 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(3523577..3524749) Mycobacterium vanbaalenii PYR-1 4644508 YP_954116.1 CDS Mvan_3312 NC_008726.1 3524746 3525621 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(3524746..3525621) Mycobacterium vanbaalenii PYR-1 4644509 YP_954117.1 CDS argJ NC_008726.1 3525618 3526814 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3525618..3526814) Mycobacterium vanbaalenii PYR-1 4644510 YP_954118.1 CDS argC NC_008726.1 3526811 3527845 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(3526811..3527845) Mycobacterium vanbaalenii PYR-1 4644511 YP_954119.1 CDS Mvan_3315 NC_008726.1 3527887 3528411 R PFAM: GCN5-related N-acetyltransferase; KEGG: nmu:Nmul_A1215 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3527887..3528411) Mycobacterium vanbaalenii PYR-1 4644512 YP_954120.1 CDS pheT NC_008726.1 3528411 3530897 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3528411..3530897) Mycobacterium vanbaalenii PYR-1 4644513 YP_954121.1 CDS pheS NC_008726.1 3530897 3531940 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3530897..3531940) Mycobacterium vanbaalenii PYR-1 4644514 YP_954122.1 CDS Mvan_3318 NC_008726.1 3532024 3532893 D hypothetical protein 3532024..3532893 Mycobacterium vanbaalenii PYR-1 4644515 YP_954123.1 CDS Mvan_3319 NC_008726.1 3533117 3534364 R PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: tfu:Tfu_1324 transposase, IS605 OrfB; IS891/IS1136/IS1341 family transposase complement(3533117..3534364) Mycobacterium vanbaalenii PYR-1 4644516 YP_954124.1 CDS Mvan_3321 NC_008726.1 3534891 3535703 R SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_2975 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase complement(3534891..3535703) Mycobacterium vanbaalenii PYR-1 4644518 YP_954125.1 CDS Mvan_3322 NC_008726.1 3535913 3536935 D KEGG: mmc:Mmcs_2976 hypothetical protein; hypothetical protein 3535913..3536935 Mycobacterium vanbaalenii PYR-1 4644519 YP_954126.1 CDS Mvan_3323 NC_008726.1 3536940 3538184 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2977 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 3536940..3538184 Mycobacterium vanbaalenii PYR-1 4644520 YP_954127.1 CDS Mvan_3324 NC_008726.1 3538181 3538990 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0188 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3538181..3538990 Mycobacterium vanbaalenii PYR-1 4644521 YP_954128.1 CDS Mvan_3325 NC_008726.1 3539116 3539862 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: mmc:Mmcs_2978 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(3539116..3539862) Mycobacterium vanbaalenii PYR-1 4644522 YP_954129.1 CDS rplT NC_008726.1 3539886 3540275 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3539886..3540275) Mycobacterium vanbaalenii PYR-1 4644523 YP_954130.1 CDS rpmI NC_008726.1 3540324 3540518 R PFAM: ribosomal protein L35; KEGG: mbo:Mb1669 50S ribosomal protein l35 RpmI; 50S ribosomal protein L35 complement(3540324..3540518) Mycobacterium vanbaalenii PYR-1 4644524 YP_954131.1 CDS Mvan_3328 NC_008726.1 3540526 3541257 R TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: mmc:Mmcs_2981 translation initiation factor IF-3; translation initiation factor IF-3 complement(3540526..3541257) Mycobacterium vanbaalenii PYR-1 4644525 YP_954132.1 CDS Mvan_3329 NC_008726.1 3541379 3541795 D KEGG: rha:RHA1_ro00965 hypothetical protein; hypothetical protein 3541379..3541795 Mycobacterium vanbaalenii PYR-1 4644526 YP_954133.1 CDS lysS NC_008726.1 3541858 3545160 D catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 3541858..3545160 Mycobacterium vanbaalenii PYR-1 4644527 YP_954134.1 CDS Mvan_3331 NC_008726.1 3545232 3546542 D PFAM: putative esterase; KEGG: mmc:Mmcs_2984 putative esterase; putative esterase 3545232..3546542 Mycobacterium vanbaalenii PYR-1 4644528 YP_954135.1 CDS Mvan_3332 NC_008726.1 3546553 3546798 D KEGG: mpa:MAP1342c hypothetical protein; hypothetical protein 3546553..3546798 Mycobacterium vanbaalenii PYR-1 4644529 YP_954136.1 CDS Mvan_3333 NC_008726.1 3546792 3547874 R KEGG: mpa:MAP0331 hypothetical protein; hypothetical protein complement(3546792..3547874) Mycobacterium vanbaalenii PYR-1 4644530 YP_954137.1 CDS Mvan_3334 NC_008726.1 3547871 3549157 R KEGG: mpa:MAP0330 hypothetical protein; hypothetical protein complement(3547871..3549157) Mycobacterium vanbaalenii PYR-1 4644380 YP_954138.1 CDS Mvan_3335 NC_008726.1 3549544 3550758 R KEGG: mpa:MAP0328 hypothetical protein; hypothetical protein complement(3549544..3550758) Mycobacterium vanbaalenii PYR-1 4644381 YP_954139.1 CDS Mvan_3336 NC_008726.1 3550755 3552434 R PFAM: Tetratricopeptide TPR_4; KEGG: mpa:MAP0327 hypothetical protein; hypothetical protein complement(3550755..3552434) Mycobacterium vanbaalenii PYR-1 4644382 YP_954140.1 CDS Mvan_3337 NC_008726.1 3552438 3552959 R PFAM: Mycobacterium 19 kDa lipoprotein antigen family protein; KEGG: mpa:MAP0326 hypothetical protein; hypothetical protein complement(3552438..3552959) Mycobacterium vanbaalenii PYR-1 4644383 YP_954141.1 CDS Mvan_3338 NC_008726.1 3553087 3554274 D KEGG: mmc:Mmcs_2986 hypothetical protein; hypothetical protein 3553087..3554274 Mycobacterium vanbaalenii PYR-1 4644384 YP_954142.1 CDS uvrA NC_008726.1 3554264 3557167 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3554264..3557167) Mycobacterium vanbaalenii PYR-1 4644385 YP_954143.1 CDS Mvan_3340 NC_008726.1 3557309 3557986 D PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_2989 beta-lactamase-like protein; beta-lactamase domain-containing protein 3557309..3557986 Mycobacterium vanbaalenii PYR-1 4644386 YP_954144.1 CDS Mvan_3341 NC_008726.1 3557983 3558903 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 3557983..3558903 Mycobacterium vanbaalenii PYR-1 4644387 YP_954145.1 CDS Mvan_3342 NC_008726.1 3558961 3559404 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_2992 UspA; UspA domain-containing protein complement(3558961..3559404) Mycobacterium vanbaalenii PYR-1 4644388 YP_954146.1 CDS Mvan_3343 NC_008726.1 3559622 3560806 R KEGG: mmc:Mmcs_5167 hypothetical protein; FHA domain-containing protein complement(3559622..3560806) Mycobacterium vanbaalenii PYR-1 4644389 YP_954147.1 CDS Mvan_3344 NC_008726.1 3560945 3561622 R PFAM: cutinase; KEGG: mpa:MAP1680c hypothetical protein; cutinase complement(3560945..3561622) Mycobacterium vanbaalenii PYR-1 4644390 YP_954148.1 CDS Mvan_3345 NC_008726.1 3561753 3562073 R PFAM: small multidrug resistance protein; KEGG: mmc:Mmcs_2867 small multidrug resistance protein; small multidrug resistance protein complement(3561753..3562073) Mycobacterium vanbaalenii PYR-1 4644391 YP_954149.1 CDS Mvan_3346 NC_008726.1 3562073 3562399 R PFAM: small multidrug resistance protein; KEGG: mmc:Mmcs_2866 small multidrug resistance protein; small multidrug resistance protein complement(3562073..3562399) Mycobacterium vanbaalenii PYR-1 4644392 YP_954150.1 CDS Mvan_3347 NC_008726.1 3562396 3562959 R PFAM: regulatory protein, TetR; KEGG: cgb:cg2894 bacterial regulatory protein, TetR family; TetR family transcriptional regulator complement(3562396..3562959) Mycobacterium vanbaalenii PYR-1 4644393 YP_954151.1 CDS Mvan_3348 NC_008726.1 3563317 3563814 D KEGG: hsa:1299 collagen, type IX, alpha 3; hypothetical protein 3563317..3563814 Mycobacterium vanbaalenii PYR-1 4644394 YP_954152.1 CDS Mvan_3349 NC_008726.1 3564000 3565421 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3000 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(3564000..3565421) Mycobacterium vanbaalenii PYR-1 4644396 YP_954153.1 CDS Mvan_3350 NC_008726.1 3565461 3567629 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3565461..3567629) Mycobacterium vanbaalenii PYR-1 4644397 YP_954154.1 CDS Mvan_3351 NC_008726.1 3567800 3568252 D PFAM: protein of unknown function DUF402; KEGG: mbo:Mb1658c hypothetical protein; hypothetical protein 3567800..3568252 Mycobacterium vanbaalenii PYR-1 4644398 YP_954155.1 CDS Mvan_3352 NC_008726.1 3568285 3568893 D KEGG: mmc:Mmcs_3003 hypothetical protein; hypothetical protein 3568285..3568893 Mycobacterium vanbaalenii PYR-1 4644399 YP_954156.1 CDS coaE NC_008726.1 3568901 3570109 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain; dephospho-CoA kinase/protein folding accessory domain-containing protein complement(3568901..3570109) Mycobacterium vanbaalenii PYR-1 4644400 YP_954157.1 CDS Mvan_3354 NC_008726.1 3570148 3570930 D PFAM: DGPFAETKE family protein; KEGG: mpa:MAP4115c hypothetical protein; DGPFAETKE family protein 3570148..3570930 Mycobacterium vanbaalenii PYR-1 4644401 YP_954158.1 CDS Mvan_3355 NC_008726.1 3570937 3572157 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: mpa:MAP4114c probable sigma-70 factor, ECF subfamily; RNA polymerase ECF-subfamily sigma factor 3570937..3572157 Mycobacterium vanbaalenii PYR-1 4644402 YP_954159.1 CDS rpsA NC_008726.1 3572216 3573661 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3572216..3573661) Mycobacterium vanbaalenii PYR-1 4644403 YP_954160.1 CDS Mvan_3357 NC_008726.1 3573813 3575012 D KEGG: mmc:Mmcs_3009 hypothetical protein; hypothetical protein 3573813..3575012 Mycobacterium vanbaalenii PYR-1 4647640 YP_954161.1 CDS Mvan_3358 NC_008726.1 3575002 3575811 R KEGG: mpa:MAP1749 hypothetical protein; hypothetical protein complement(3575002..3575811) Mycobacterium vanbaalenii PYR-1 4647641 YP_954162.1 CDS Mvan_3359 NC_008726.1 3575867 3577375 R PFAM: Carotenoid oxygenase; KEGG: mpa:MAP1324 lignostilbene-alpha,beta-dioxygenase; carotenoid oxygenase complement(3575867..3577375) Mycobacterium vanbaalenii PYR-1 4647642 YP_954163.1 CDS Mvan_3360 NC_008726.1 3577393 3578022 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP1323 hypothetical protein; TetR family transcriptional regulator complement(3577393..3578022) Mycobacterium vanbaalenii PYR-1 4647643 YP_954164.1 CDS Mvan_3361 NC_008726.1 3578063 3580792 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3578063..3580792) Mycobacterium vanbaalenii PYR-1 4647644 YP_954165.1 CDS Mvan_3362 NC_008726.1 3580802 3581707 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_3012 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3580802..3581707) Mycobacterium vanbaalenii PYR-1 4647645 YP_954166.1 CDS Mvan_3363 NC_008726.1 3581778 3582455 D KEGG: mmc:Mmcs_3013 hypothetical protein; hypothetical protein 3581778..3582455 Mycobacterium vanbaalenii PYR-1 4647646 YP_954167.1 CDS Mvan_3364 NC_008726.1 3582466 3582813 R hypothetical protein complement(3582466..3582813) Mycobacterium vanbaalenii PYR-1 4647647 YP_954168.1 CDS Mvan_3365 NC_008726.1 3582969 3583487 D PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3014 protein of unknown function DUF35; hypothetical protein 3582969..3583487 Mycobacterium vanbaalenii PYR-1 4647648 YP_954169.1 CDS Mvan_3366 NC_008726.1 3583484 3584683 D KEGG: mmc:Mmcs_3015 lipid-transfer protein; lipid-transfer protein 3583484..3584683 Mycobacterium vanbaalenii PYR-1 4647649 YP_954170.1 CDS Mvan_3367 NC_008726.1 3584735 3585289 R KEGG: mmc:Mmcs_0295 hypothetical protein; hypothetical protein complement(3584735..3585289) Mycobacterium vanbaalenii PYR-1 4647650 YP_954171.1 CDS Mvan_3368 NC_008726.1 3585328 3586164 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_0291 luciferase-like protein; luciferase family protein complement(3585328..3586164) Mycobacterium vanbaalenii PYR-1 4647651 YP_954172.1 CDS Mvan_3369 NC_008726.1 3586228 3587097 R PFAM: transport system permease protein; ABC-3 protein; KEGG: nfa:nfa24360 putative ABC transporter membrane protein; ABC-3 protein complement(3586228..3587097) Mycobacterium vanbaalenii PYR-1 4647652 YP_954173.1 CDS Mvan_3370 NC_008726.1 3587094 3587825 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa24350 putative ABC transporter ATP-binding protein; ABC transporter--like protein complement(3587094..3587825) Mycobacterium vanbaalenii PYR-1 4647653 YP_954174.1 CDS Mvan_3371 NC_008726.1 3587822 3588745 R PFAM: periplasmic solute binding protein; KEGG: nfa:nfa24340 putative ABC transporter substrate-binding protein; periplasmic solute binding protein complement(3587822..3588745) Mycobacterium vanbaalenii PYR-1 4647654 YP_954175.1 CDS Mvan_3372 NC_008726.1 3588850 3589170 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_5264 transcriptional regulator, ArsR family; regulatory protein ArsR 3588850..3589170 Mycobacterium vanbaalenii PYR-1 4647655 YP_954176.1 CDS Mvan_3373 NC_008726.1 3589167 3589556 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_5265 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3589167..3589556 Mycobacterium vanbaalenii PYR-1 4647656 YP_954177.1 CDS Mvan_3374 NC_008726.1 3589564 3591549 R PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2512 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(3589564..3591549) Mycobacterium vanbaalenii PYR-1 4647657 YP_954178.1 CDS Mvan_3375 NC_008726.1 3591700 3592689 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_0877 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3591700..3592689 Mycobacterium vanbaalenii PYR-1 4647658 YP_954179.1 CDS Mvan_3376 NC_008726.1 3592686 3593537 R PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: mmc:Mmcs_4180 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; peptidoglycan binding domain-containing protein complement(3592686..3593537) Mycobacterium vanbaalenii PYR-1 4647659 YP_954180.1 CDS Mvan_3377 NC_008726.1 3593635 3594114 D KEGG: mmc:Mmcs_3027 hypothetical protein; hypothetical protein 3593635..3594114 Mycobacterium vanbaalenii PYR-1 4647660 YP_954181.1 CDS Mvan_3378 NC_008726.1 3594207 3594602 D KEGG: mpa:MAP0140 hypothetical protein; hypothetical protein 3594207..3594602 Mycobacterium vanbaalenii PYR-1 4647661 YP_954182.1 CDS Mvan_3379 NC_008726.1 3594661 3596154 R PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein complement(3594661..3596154) Mycobacterium vanbaalenii PYR-1 4647662 YP_954183.1 CDS Mvan_3380 NC_008726.1 3596622 3597440 D PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: tfu:Tfu_1860 iron-chelator utilization protein; siderophore-interacting protein 3596622..3597440 Mycobacterium vanbaalenii PYR-1 4647663 YP_954184.1 CDS Mvan_3381 NC_008726.1 3597458 3598291 R KEGG: mmc:Mmcs_2528 hypothetical protein; hypothetical protein complement(3597458..3598291) Mycobacterium vanbaalenii PYR-1 4647664 YP_954185.1 CDS Mvan_3382 NC_008726.1 3598343 3598864 R PFAM: TspO/MBR family protein; KEGG: mmc:Mmcs_2570 TspO and MBR like proteins; TspO and MBR like proteins complement(3598343..3598864) Mycobacterium vanbaalenii PYR-1 4644992 YP_954186.1 CDS Mvan_3383 NC_008726.1 3598901 3600292 R PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: sma:SAV7206 cytosine permease; cytosine/purines uracil thiamine allantoin permease complement(3598901..3600292) Mycobacterium vanbaalenii PYR-1 4644993 YP_954187.1 CDS Mvan_3384 NC_008726.1 3600345 3601529 D PFAM: peptidase S58, DmpA; KEGG: mlo:mll6895 D-aminopeptidase; peptidase S58, DmpA 3600345..3601529 Mycobacterium vanbaalenii PYR-1 4644994 YP_954188.1 CDS Mvan_3385 NC_008726.1 3601569 3603038 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2569 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3601569..3603038 Mycobacterium vanbaalenii PYR-1 4644995 YP_954189.1 CDS Mvan_3386 NC_008726.1 3603105 3603536 R KEGG: mmc:Mmcs_2568 hypothetical protein; hypothetical protein complement(3603105..3603536) Mycobacterium vanbaalenii PYR-1 4644996 YP_954190.1 CDS Mvan_3387 NC_008726.1 3603892 3605013 D KEGG: mmc:Mmcs_2567 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 3603892..3605013 Mycobacterium vanbaalenii PYR-1 4644997 YP_954191.1 CDS Mvan_3388 NC_008726.1 3605074 3606255 D PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2566 twin-arginine translocation pathway signal; extracellular solute-binding protein 3605074..3606255 Mycobacterium vanbaalenii PYR-1 4644998 YP_954192.1 CDS Mvan_3389 NC_008726.1 3606260 3607135 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2565 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3606260..3607135 Mycobacterium vanbaalenii PYR-1 4644999 YP_954193.1 CDS Mvan_3390 NC_008726.1 3607132 3607989 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2564 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3607132..3607989 Mycobacterium vanbaalenii PYR-1 4645000 YP_954194.1 CDS Mvan_3391 NC_008726.1 3608000 3608362 R KEGG: nfa:nfa34980 hypothetical protein; hypothetical protein complement(3608000..3608362) Mycobacterium vanbaalenii PYR-1 4645001 YP_954195.1 CDS Mvan_3392 NC_008726.1 3608374 3609207 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_2563 protein of unknown function DUF6, transmembrane; hypothetical protein complement(3608374..3609207) Mycobacterium vanbaalenii PYR-1 4645002 YP_954196.1 CDS Mvan_3393 NC_008726.1 3609333 3609914 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0336 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3609333..3609914) Mycobacterium vanbaalenii PYR-1 4645003 YP_954197.1 CDS Mvan_3394 NC_008726.1 3609993 3610823 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0335 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3609993..3610823 Mycobacterium vanbaalenii PYR-1 4645004 YP_954198.1 CDS Mvan_3395 NC_008726.1 3610820 3611626 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0334 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3610820..3611626 Mycobacterium vanbaalenii PYR-1 4645005 YP_954199.1 CDS Mvan_3396 NC_008726.1 3611649 3612449 D PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_0333 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 3611649..3612449 Mycobacterium vanbaalenii PYR-1 4645006 YP_954200.1 CDS Mvan_3398 NC_008726.1 3613516 3614631 R KEGG: mpa:MAP4311c hypothetical protein; hypothetical protein complement(3613516..3614631) Mycobacterium vanbaalenii PYR-1 4645008 YP_954201.1 CDS Mvan_3399 NC_008726.1 3614701 3615321 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP4312 hypothetical protein; TetR family transcriptional regulator complement(3614701..3615321) Mycobacterium vanbaalenii PYR-1 4645009 YP_954202.1 CDS Mvan_3400 NC_008726.1 3615359 3616168 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP3925 EchA8_2; enoyl-CoA hydratase/isomerase complement(3615359..3616168) Mycobacterium vanbaalenii PYR-1 4645010 YP_954203.1 CDS Mvan_3401 NC_008726.1 3616217 3617146 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tfu:Tfu_1423 putative transcriptional regulator; LysR family transcriptional regulator 3616217..3617146 Mycobacterium vanbaalenii PYR-1 4645011 YP_954204.1 CDS Mvan_3402 NC_008726.1 3617092 3617823 R PFAM: beta-lactamase domain protein; KEGG: mbo:Mb1948 hypothetical protein; beta-lactamase domain-containing protein complement(3617092..3617823) Mycobacterium vanbaalenii PYR-1 4645012 YP_954205.1 CDS Mvan_3403 NC_008726.1 3617897 3618727 D PFAM: DoxX family protein; KEGG: mmc:Mmcs_2517 DoxX; DoxX family protein 3617897..3618727 Mycobacterium vanbaalenii PYR-1 4645013 YP_954206.1 CDS Mvan_3404 NC_008726.1 3618757 3619506 R KEGG: mbo:Mb3059 hypothetical protein; hypothetical protein complement(3618757..3619506) Mycobacterium vanbaalenii PYR-1 4645014 YP_954207.1 CDS Mvan_3405 NC_008726.1 3619583 3620467 D KEGG: mmc:Mmcs_2515 hypothetical protein; hypothetical protein 3619583..3620467 Mycobacterium vanbaalenii PYR-1 4645015 YP_954208.1 CDS Mvan_3406 NC_008726.1 3620547 3620873 R PFAM: protein of unknown function UPF0060; KEGG: mmc:Mmcs_2513 protein of unknown function UPF0060; hypothetical protein complement(3620547..3620873) Mycobacterium vanbaalenii PYR-1 4645016 YP_954209.1 CDS tynA NC_008726.1 3620890 3622902 R catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; tyramine oxidase complement(3620890..3622902) Mycobacterium vanbaalenii PYR-1 4645017 YP_954210.1 CDS Mvan_3408 NC_008726.1 3622954 3624462 R PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2511 carboxylesterase, type B; carboxylesterase complement(3622954..3624462) Mycobacterium vanbaalenii PYR-1 4646018 YP_954211.1 CDS Mvan_3409 NC_008726.1 3624535 3625218 D KEGG: mpa:MAP1781 LppI; LppI 3624535..3625218 Mycobacterium vanbaalenii PYR-1 4646019 YP_954212.1 CDS Mvan_3410 NC_008726.1 3625227 3625805 R KEGG: mmc:Mmcs_2509 hypothetical protein; hypothetical protein complement(3625227..3625805) Mycobacterium vanbaalenii PYR-1 4646020 YP_954213.1 CDS Mvan_3411 NC_008726.1 3626049 3627086 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: mpa:MAP1807c putative sulfonate binding protein precursor; aliphatic sulfonate ABC transporter periplasmic ligand-binding protein complement(3626049..3627086) Mycobacterium vanbaalenii PYR-1 4646021 YP_954214.1 CDS Mvan_3412 NC_008726.1 3627112 3627864 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpa:MAP1808c ABC-type transporter, ATPase component; ABC transporter--like protein complement(3627112..3627864) Mycobacterium vanbaalenii PYR-1 4646022 YP_954215.1 CDS Mvan_3413 NC_008726.1 3627861 3628676 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP1809c ABC-type transporter, permease component; binding-protein-dependent transport system inner membrane protein complement(3627861..3628676) Mycobacterium vanbaalenii PYR-1 4646023 YP_954216.1 CDS Mvan_3414 NC_008726.1 3628746 3629459 R KEGG: mmc:Mmcs_2508 hypothetical protein; hypothetical protein complement(3628746..3629459) Mycobacterium vanbaalenii PYR-1 4646024 YP_954217.1 CDS Mvan_3415 NC_008726.1 3629531 3630841 R PFAM: alpha/beta hydrolase fold; transcriptional regulator domain protein; KEGG: mmc:Mmcs_2507 transcriptional regulator, CadC; transcriptional regulator CadC complement(3629531..3630841) Mycobacterium vanbaalenii PYR-1 4646025 YP_954218.1 CDS Mvan_3416 NC_008726.1 3630819 3631169 R KEGG: mmc:Mmcs_2505 hypothetical protein; hypothetical protein complement(3630819..3631169) Mycobacterium vanbaalenii PYR-1 4646026 YP_954219.1 CDS Mvan_3417 NC_008726.1 3631319 3631654 D KEGG: mmc:Mmcs_2504 hypothetical protein; hypothetical protein 3631319..3631654 Mycobacterium vanbaalenii PYR-1 4646027 YP_954220.1 CDS Mvan_3418 NC_008726.1 3631758 3632546 R PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_2503 dolichyl-phosphate beta-D-mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase complement(3631758..3632546) Mycobacterium vanbaalenii PYR-1 4646028 YP_954221.1 CDS Mvan_3419 NC_008726.1 3632543 3634198 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmc:Mmcs_2502 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(3632543..3634198) Mycobacterium vanbaalenii PYR-1 4646029 YP_954222.1 CDS Mvan_3420 NC_008726.1 3634191 3635771 R PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_2501 amidohydrolase 3; amidohydrolase 3 complement(3634191..3635771) Mycobacterium vanbaalenii PYR-1 4646030 YP_954223.1 CDS fxsA NC_008726.1 3635768 3636244 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein complement(3635768..3636244) Mycobacterium vanbaalenii PYR-1 4646031 YP_954224.1 CDS Mvan_3422 NC_008726.1 3636313 3636705 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_2498 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(3636313..3636705) Mycobacterium vanbaalenii PYR-1 4646032 YP_954225.1 CDS Mvan_3423 NC_008726.1 3636713 3637096 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_2497 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(3636713..3637096) Mycobacterium vanbaalenii PYR-1 4646033 YP_954226.1 CDS Mvan_3425 NC_008726.1 3637538 3638893 D PFAM: transposase, mutator type; KEGG: cjk:jk1787 transposase for IS3508i; transposase, mutator type 3637538..3638893 Mycobacterium vanbaalenii PYR-1 4646035 YP_954227.1 CDS cobN NC_008726.1 3639986 3643603 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(3639986..3643603) Mycobacterium vanbaalenii PYR-1 4646036 YP_954228.1 CDS Mvan_3427 NC_008726.1 3643847 3645298 R KEGG: mbo:Mb0916 probable monooxygenase; putative monooxygenase complement(3643847..3645298) Mycobacterium vanbaalenii PYR-1 4646037 YP_954229.1 CDS Mvan_3428 NC_008726.1 3645395 3645667 R hypothetical protein complement(3645395..3645667) Mycobacterium vanbaalenii PYR-1 4646038 YP_954230.1 CDS Mvan_3429 NC_008726.1 3645855 3646973 D TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; KEGG: mmc:Mmcs_2489 precorrin-3B synthase; precorrin-3B synthase 3645855..3646973 Mycobacterium vanbaalenii PYR-1 4646039 YP_954231.1 CDS cobH NC_008726.1 3646983 3647609 D catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 3646983..3647609 Mycobacterium vanbaalenii PYR-1 4646040 YP_954232.1 CDS Mvan_3431 NC_008726.1 3647606 3649093 D KEGG: mmc:Mmcs_2487 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-3B C(17)-methyltransferase 3647606..3649093 Mycobacterium vanbaalenii PYR-1 4646041 YP_954233.1 CDS Mvan_3432 NC_008726.1 3649178 3649813 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1753 transcriptional regulator, TetR family; TetR family transcriptional regulator 3649178..3649813 Mycobacterium vanbaalenii PYR-1 4646042 YP_954234.1 CDS Mvan_3433 NC_008726.1 3649825 3650904 D PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3649825..3650904 Mycobacterium vanbaalenii PYR-1 4646247 YP_954235.1 CDS Mvan_3434 NC_008726.1 3650867 3652054 R KEGG: mpa:MAP1817c precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6Y C5,15-methyltransferase subunit CbiT complement(3650867..3652054) Mycobacterium vanbaalenii PYR-1 4646248 YP_954236.1 CDS Mvan_3435 NC_008726.1 3652051 3652800 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2482 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3652051..3652800) Mycobacterium vanbaalenii PYR-1 4646249 YP_954237.1 CDS Mvan_3436 NC_008726.1 3652835 3653248 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1820 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 3652835..3653248 Mycobacterium vanbaalenii PYR-1 4646250 YP_954238.1 CDS Mvan_3437 NC_008726.1 3653256 3654386 R PFAM: peptidase M24; KEGG: mmc:Mmcs_2480 peptidase M24; peptidase M24 complement(3653256..3654386) Mycobacterium vanbaalenii PYR-1 4646251 YP_954239.1 CDS Mvan_3438 NC_008726.1 3654438 3655409 D PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: mpa:MAP1825 5'-3'-exonuclease, putative; 5'-3' exonuclease 3654438..3655409 Mycobacterium vanbaalenii PYR-1 4646252 YP_954240.1 CDS Mvan_3439 NC_008726.1 3655418 3656212 R KEGG: mmc:Mmcs_2477 hypothetical protein; hypothetical protein complement(3655418..3656212) Mycobacterium vanbaalenii PYR-1 4646253 YP_954241.1 CDS Mvan_3440 NC_008726.1 3656267 3659056 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; DSH domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_2476 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase complement(3656267..3659056) Mycobacterium vanbaalenii PYR-1 4646254 YP_954242.1 CDS Mvan_3441 NC_008726.1 3659040 3659990 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mmc:Mmcs_2475 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC complement(3659040..3659990) Mycobacterium vanbaalenii PYR-1 4646255 YP_954243.1 CDS tatA NC_008726.1 3660068 3660316 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3660068..3660316) Mycobacterium vanbaalenii PYR-1 4646256 YP_954244.1 CDS Mvan_3443 NC_008726.1 3660347 3661342 R KEGG: mmc:Mmcs_2473 transcriptional regulator-like protein; transcriptional regulator-like protein complement(3660347..3661342) Mycobacterium vanbaalenii PYR-1 4646257 YP_954245.1 CDS Mvan_3444 NC_008726.1 3661339 3662346 R KEGG: mmc:Mmcs_2472 hypothetical protein; hypothetical protein complement(3661339..3662346) Mycobacterium vanbaalenii PYR-1 4646258 YP_954246.1 CDS Mvan_3445 NC_008726.1 3662419 3663807 R PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: mmc:Mmcs_2467 protein of unknown function DUF245-like protein; hypothetical protein complement(3662419..3663807) Mycobacterium vanbaalenii PYR-1 4646259 YP_954247.1 CDS Mvan_3446 NC_008726.1 3663882 3664160 D hypothetical protein 3663882..3664160 Mycobacterium vanbaalenii PYR-1 4646260 YP_954248.1 CDS Mvan_3447 NC_008726.1 3664178 3665794 D PFAM: protein of unknown function DUF1023; KEGG: mmc:Mmcs_0775 protein of unknown function DUF1023; hypothetical protein 3664178..3665794 Mycobacterium vanbaalenii PYR-1 4646261 YP_954249.1 CDS Mvan_3448 NC_008726.1 3665810 3666574 R PFAM: 20S proteasome, A and B subunits; KEGG: mmc:Mmcs_3129 20S proteasome, A and B subunits; 20S proteasome, A and B subunits complement(3665810..3666574) Mycobacterium vanbaalenii PYR-1 4646262 YP_954250.1 CDS Mvan_3449 NC_008726.1 3666571 3667491 R PFAM: 20S proteasome, A and B subunits; KEGG: mmc:Mmcs_3130 20S proteasome, A and B subunits; 20S proteasome, A and B subunits complement(3666571..3667491) Mycobacterium vanbaalenii PYR-1 4646263 YP_954251.1 CDS Mvan_3450 NC_008726.1 3667488 3667682 R PFAM: protein of unknown function DUF797; KEGG: mbo:Mb2135c hypothetical protein; hypothetical protein complement(3667488..3667682) Mycobacterium vanbaalenii PYR-1 4646264 YP_954252.1 CDS Mvan_3451 NC_008726.1 3667791 3669299 R PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: mmc:Mmcs_3131 protein of unknown function DUF245-like protein; hypothetical protein complement(3667791..3669299) Mycobacterium vanbaalenii PYR-1 4646265 YP_954253.1 CDS Mvan_3452 NC_008726.1 3669394 3670539 D KEGG: mtc:MT2173 hypothetical protein; hypothetical protein 3669394..3670539 Mycobacterium vanbaalenii PYR-1 4646266 YP_954254.1 CDS Mvan_3453 NC_008726.1 3670589 3671035 D TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mmc:Mmcs_0915 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3670589..3671035 Mycobacterium vanbaalenii PYR-1 4646267 YP_954255.1 CDS Mvan_3454 NC_008726.1 3671081 3672235 D KEGG: mtc:MT2173 hypothetical protein; hypothetical protein 3671081..3672235 Mycobacterium vanbaalenii PYR-1 4646268 YP_954256.1 CDS Mvan_3455 NC_008726.1 3672260 3672862 D KEGG: mbo:Mb2138 hypothetical protein; hypothetical protein 3672260..3672862 Mycobacterium vanbaalenii PYR-1 4646269 YP_954257.1 CDS Mvan_3456 NC_008726.1 3672872 3673189 R KEGG: mmc:Mmcs_1284 hypothetical protein; hypothetical protein complement(3672872..3673189) Mycobacterium vanbaalenii PYR-1 4646270 YP_954258.1 CDS Mvan_3457 NC_008726.1 3673320 3673817 R PFAM: protein of unknown function DUF355; KEGG: mtc:MT3840 hypothetical protein; hypothetical protein complement(3673320..3673817) Mycobacterium vanbaalenii PYR-1 4646271 YP_954259.1 CDS Mvan_3458 NC_008726.1 3673862 3675709 R KEGG: mmc:Mmcs_3132 vesicle-fusing ATPase; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; vesicle-fusing ATPase complement(3673862..3675709) Mycobacterium vanbaalenii PYR-1 4644746 YP_954260.1 CDS Mvan_3459 NC_008726.1 3675856 3676353 D KEGG: mmc:Mmcs_3133 low molecular weight antigen CFP2 (low molecular weight protein antigen 2) (CFP-2); low molecular weight antigen CFP2 3675856..3676353 Mycobacterium vanbaalenii PYR-1 4644747 YP_954261.1 CDS Mvan_3460 NC_008726.1 3676368 3676892 D KEGG: mbo:Mb2140 probable conserved lipoprotein LppK; putative lipoprotein LppK 3676368..3676892 Mycobacterium vanbaalenii PYR-1 4644748 YP_954262.1 CDS Mvan_3461 NC_008726.1 3676896 3677195 D PFAM: protein of unknown function DUF503; KEGG: mmc:Mmcs_3135 protein of unknown function DUF503; hypothetical protein 3676896..3677195 Mycobacterium vanbaalenii PYR-1 4644749 YP_954263.1 CDS Mvan_3462 NC_008726.1 3677192 3678019 R PFAM: Methyltransferase type 12; KEGG: mmc:Mmcs_3136 tRNA (adenine-N(1)-)-methyltransferase; tRNA (adenine-N(1)-)-methyltransferase complement(3677192..3678019) Mycobacterium vanbaalenii PYR-1 4644750 YP_954264.1 CDS Mvan_3463 NC_008726.1 3678075 3678989 D KEGG: mmc:Mmcs_3137 putative RecB family exonuclease; recombinase B 3678075..3678989 Mycobacterium vanbaalenii PYR-1 4644751 YP_954265.1 CDS Mvan_3464 NC_008726.1 3678986 3679783 D KEGG: mmc:Mmcs_3138 hypothetical protein; hypothetical protein 3678986..3679783 Mycobacterium vanbaalenii PYR-1 4644752 YP_954266.1 CDS Mvan_3465 NC_008726.1 3679780 3680292 D KEGG: mmc:Mmcs_3139 hypothetical protein; hypothetical protein 3679780..3680292 Mycobacterium vanbaalenii PYR-1 4644753 YP_954267.1 CDS Mvan_3466 NC_008726.1 3680304 3681242 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3680304..3681242) Mycobacterium vanbaalenii PYR-1 4644754 YP_954268.1 CDS Mvan_3467 NC_008726.1 3681235 3681921 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4215 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3681235..3681921) Mycobacterium vanbaalenii PYR-1 4644755 YP_954269.1 CDS Mvan_3468 NC_008726.1 3681988 3683361 R Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase complement(3681988..3683361) Mycobacterium vanbaalenii PYR-1 4644756 YP_954270.1 CDS Mvan_3469 NC_008726.1 3683370 3683852 R PFAM: 17 kDa surface antigen; KEGG: mmc:Mmcs_3143 putative conserved integral membrane protein; 17 kDa surface antigen complement(3683370..3683852) Mycobacterium vanbaalenii PYR-1 4644757 YP_954271.1 CDS hisG NC_008726.1 3683920 3684786 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(3683920..3684786) Mycobacterium vanbaalenii PYR-1 4644758 YP_954272.1 CDS hisE NC_008726.1 3684787 3685068 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3684787..3685068) Mycobacterium vanbaalenii PYR-1 4644759 YP_954273.1 CDS Mvan_3472 NC_008726.1 3685114 3686586 R TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3147 sugar transporter; sugar transporter complement(3685114..3686586) Mycobacterium vanbaalenii PYR-1 4644760 YP_954274.1 CDS Mvan_3473 NC_008726.1 3686693 3687424 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_3148 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase complement(3686693..3687424) Mycobacterium vanbaalenii PYR-1 4644761 YP_954275.1 CDS metH NC_008726.1 3687484 3691239 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(3687484..3691239) Mycobacterium vanbaalenii PYR-1 4644762 YP_954276.1 CDS Mvan_3475 NC_008726.1 3691673 3692563 D PFAM: protein of unknown function DUF75; KEGG: mmc:Mmcs_3150 protein of unknown function DUF75; hypothetical protein 3691673..3692563 Mycobacterium vanbaalenii PYR-1 4644763 YP_954277.1 CDS Mvan_3476 NC_008726.1 3692784 3694223 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: mmc:Mmcs_3151 protein of unknown function DUF1214; hypothetical protein complement(3692784..3694223) Mycobacterium vanbaalenii PYR-1 4644764 YP_954278.1 CDS Mvan_3477 NC_008726.1 3694223 3695101 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3152 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(3694223..3695101) Mycobacterium vanbaalenii PYR-1 4644765 YP_954279.1 CDS Mvan_3478 NC_008726.1 3695131 3696420 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3695131..3696420) Mycobacterium vanbaalenii PYR-1 4644766 YP_954280.1 CDS Mvan_3479 NC_008726.1 3696452 3697225 R PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_3154 inositol monophosphatase; inositol monophosphatase complement(3696452..3697225) Mycobacterium vanbaalenii PYR-1 4644767 YP_954281.1 CDS Mvan_3480 NC_008726.1 3697243 3698067 R KEGG: mmc:Mmcs_3155 phosphatidylinositol 3- and 4-kinase, catalytic; phosphatidylinositol 3- and 4-kinase catalytic subunit complement(3697243..3698067) Mycobacterium vanbaalenii PYR-1 4644768 YP_954282.1 CDS Mvan_3481 NC_008726.1 3698054 3698638 R KEGG: mmc:Mmcs_3156 hypothetical protein; hypothetical protein complement(3698054..3698638) Mycobacterium vanbaalenii PYR-1 4644769 YP_954283.1 CDS Mvan_3482 NC_008726.1 3698676 3699380 R PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3157 phosphoglycerate mutase; phosphoglycerate mutase complement(3698676..3699380) Mycobacterium vanbaalenii PYR-1 4644770 YP_954284.1 CDS Mvan_3483 NC_008726.1 3699397 3700227 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3699397..3700227) Mycobacterium vanbaalenii PYR-1 4649298 YP_954285.1 CDS Mvan_3484 NC_008726.1 3700282 3700665 R KEGG: mmc:Mmcs_3159 hypothetical protein; hypothetical protein complement(3700282..3700665) Mycobacterium vanbaalenii PYR-1 4649299 YP_954286.1 CDS Mvan_3485 NC_008726.1 3700716 3701750 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_3160 lipoprotein, putative; SMP-30/gluconolaconase/LRE domain-containing protein 3700716..3701750 Mycobacterium vanbaalenii PYR-1 4649300 YP_954287.1 CDS Mvan_3486 NC_008726.1 3701747 3702013 D KEGG: mmc:Mmcs_3161 hypothetical protein; hypothetical protein 3701747..3702013 Mycobacterium vanbaalenii PYR-1 4649301 YP_954288.1 CDS Mvan_3487 NC_008726.1 3702013 3703074 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 3702013..3703074 Mycobacterium vanbaalenii PYR-1 4649302 YP_954289.1 CDS Mvan_3488 NC_008726.1 3703139 3703675 R PFAM: PEBP family protein; KEGG: mmc:Mmcs_3163 YbhB and YbcL; PEBP family protein complement(3703139..3703675) Mycobacterium vanbaalenii PYR-1 4649303 YP_954290.1 CDS Mvan_3489 NC_008726.1 3703700 3704992 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mmc:Mmcs_3164 peptidase M20; hypothetical protein complement(3703700..3704992) Mycobacterium vanbaalenii PYR-1 4649304 YP_954291.1 CDS Mvan_3490 NC_008726.1 3705263 3706579 D KEGG: mpa:MAP1753 hypothetical protein; hypothetical protein 3705263..3706579 Mycobacterium vanbaalenii PYR-1 4649306 YP_954292.1 CDS Mvan_3491 NC_008726.1 3706589 3710527 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mmc:Mmcs_3229 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(3706589..3710527) Mycobacterium vanbaalenii PYR-1 4649307 YP_954293.1 CDS Mvan_3492 NC_008726.1 3710535 3711938 R TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP3712 nitrite extrusion protein; nitrite transporter complement(3710535..3711938) Mycobacterium vanbaalenii PYR-1 4649308 YP_954294.1 CDS Mvan_3493 NC_008726.1 3712171 3712524 D KEGG: mmc:Mmcs_3230 hypothetical protein; hypothetical protein 3712171..3712524 Mycobacterium vanbaalenii PYR-1 4649309 YP_954295.1 CDS Mvan_3494 NC_008726.1 3712527 3714995 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3231 nitrite reductase (NAD(P)H) large subunit, NirB; nitrite reductase (NAD(P)H) large subunit 3712527..3714995 Mycobacterium vanbaalenii PYR-1 4649310 YP_954296.1 CDS Mvan_3495 NC_008726.1 3715088 3715390 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3232 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 3715088..3715390 Mycobacterium vanbaalenii PYR-1 4649311 YP_954297.1 CDS Mvan_3496 NC_008726.1 3715380 3716042 R PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: mmc:Mmcs_3553 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3715380..3716042) Mycobacterium vanbaalenii PYR-1 4649312 YP_954298.1 CDS Mvan_3497 NC_008726.1 3716094 3717029 D KEGG: mmc:Mmcs_3554 hypothetical protein; hypothetical protein 3716094..3717029 Mycobacterium vanbaalenii PYR-1 4649313 YP_954299.1 CDS Mvan_3498 NC_008726.1 3717022 3718179 D KEGG: mmc:Mmcs_3555 hypothetical protein; hypothetical protein 3717022..3718179 Mycobacterium vanbaalenii PYR-1 4649314 YP_954300.1 CDS Mvan_3499 NC_008726.1 3718160 3718555 R PFAM: UspA domain protein; KEGG: mmc:Mmcs_3234 UspA; UspA domain-containing protein complement(3718160..3718555) Mycobacterium vanbaalenii PYR-1 4649315 YP_954301.1 CDS Mvan_3500 NC_008726.1 3718552 3720093 R PFAM: protein of unknown function DUF112, transmembrane; KEGG: mmc:Mmcs_3235 protein of unknown function DUF112, transmembrane; hypothetical protein complement(3718552..3720093) Mycobacterium vanbaalenii PYR-1 4649316 YP_954302.1 CDS Mvan_3501 NC_008726.1 3720094 3720594 R KEGG: mmc:Mmcs_3236 integral membrane protein; integral membrane protein complement(3720094..3720594) Mycobacterium vanbaalenii PYR-1 4649317 YP_954303.1 CDS Mvan_3502 NC_008726.1 3720591 3721595 R PFAM: Uncharacterized protein UPF0065; KEGG: rha:RHA1_ro06623 hypothetical protein; hypothetical protein complement(3720591..3721595) Mycobacterium vanbaalenii PYR-1 4649318 YP_954304.1 CDS Mvan_3503 NC_008726.1 3721668 3723308 D PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold domain protein; KEGG: mmc:Mmcs_3238 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism 3721668..3723308 Mycobacterium vanbaalenii PYR-1 4649319 YP_954305.1 CDS Mvan_3504 NC_008726.1 3723301 3723966 D PFAM: response regulator receiver; KEGG: mmc:Mmcs_3239 response regulator receiver and unknown domain protein; response regulator receiver/unknown domain-containing protein 3723301..3723966 Mycobacterium vanbaalenii PYR-1 4649320 YP_954306.1 CDS Mvan_3505 NC_008726.1 3723963 3730880 R PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; Na-Ca exchanger/integrin-beta4; KEGG: lxx:Lxx22675 cellulase; chitinase, cellulase complement(3723963..3730880) Mycobacterium vanbaalenii PYR-1 4649321 YP_954307.1 CDS Mvan_3506 NC_008726.1 3731726 3732025 D KEGG: mmc:Mmcs_0410 hypothetical protein; hypothetical protein 3731726..3732025 Mycobacterium vanbaalenii PYR-1 4649322 YP_954308.1 CDS Mvan_3507 NC_008726.1 3732269 3733147 D PFAM: regulatory protein, MerR; transcription activator, effector binding; KEGG: sco:SCO0140 MerR-family transcriptional regulator; MerR family transcriptional regulator 3732269..3733147 Mycobacterium vanbaalenii PYR-1 4649197 YP_954309.1 CDS Mvan_3508 NC_008726.1 3733159 3733995 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: bxe:Bxe_B1950 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3733159..3733995) Mycobacterium vanbaalenii PYR-1 4649198 YP_954310.1 CDS Mvan_3509 NC_008726.1 3733992 3734357 R KEGG: mmc:Mmcs_4664 hypothetical protein; hypothetical protein complement(3733992..3734357) Mycobacterium vanbaalenii PYR-1 4649199 YP_954311.1 CDS Mvan_3510 NC_008726.1 3734424 3735653 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_3243 beta-lactamase; beta-lactamase 3734424..3735653 Mycobacterium vanbaalenii PYR-1 4649200 YP_954312.1 CDS Mvan_3511 NC_008726.1 3735653 3736384 D PFAM: glutamine amidotransferase class-I; KEGG: mmc:Mmcs_3244 glutamine amidotransferase class-I; glutamine amidotransferase 3735653..3736384 Mycobacterium vanbaalenii PYR-1 4649201 YP_954313.1 CDS Mvan_3512 NC_008726.1 3736366 3737715 R PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: mmc:Mmcs_3245 hypothetical protein; hypothetical protein complement(3736366..3737715) Mycobacterium vanbaalenii PYR-1 4649202 YP_954314.1 CDS Mvan_3513 NC_008726.1 3737819 3738481 D PFAM: phosphoribosyltransferase; KEGG: mbo:Mb2167 hypothetical protein; phosphoribosyltransferase 3737819..3738481 Mycobacterium vanbaalenii PYR-1 4649203 YP_954315.1 CDS Mvan_3514 NC_008726.1 3738491 3738847 R KEGG: mpa:MAP1888c hypothetical protein; hypothetical protein complement(3738491..3738847) Mycobacterium vanbaalenii PYR-1 4649204 YP_954316.1 CDS Mvan_3515 NC_008726.1 3738878 3739693 R PFAM: DivIVA family protein; KEGG: mmc:Mmcs_3248 DivIVA; DivIVA family protein complement(3738878..3739693) Mycobacterium vanbaalenii PYR-1 4649205 YP_954317.1 CDS Mvan_3516 NC_008726.1 3739886 3740176 R KEGG: mmc:Mmcs_3249 hypothetical protein; hypothetical protein complement(3739886..3740176) Mycobacterium vanbaalenii PYR-1 4649206 YP_954318.1 CDS Mvan_3517 NC_008726.1 3740296 3740928 R PFAM: protein of unknown function DUF552; KEGG: mmc:Mmcs_3250 protein of unknown function DUF552; hypothetical protein complement(3740296..3740928) Mycobacterium vanbaalenii PYR-1 4649207 YP_954319.1 CDS Mvan_3518 NC_008726.1 3740925 3741752 R PFAM: alanine racemase domain protein; KEGG: mmc:Mmcs_3251 protein of unknown function UPF0001; alanine racemase domain-containing protein complement(3740925..3741752) Mycobacterium vanbaalenii PYR-1 4649208 YP_954320.1 CDS Mvan_3519 NC_008726.1 3741749 3742438 R PFAM: protein of unknown function DUF152; KEGG: mbo:Mb2173c conserved hypothetical protein YfiH; hypothetical protein complement(3741749..3742438) Mycobacterium vanbaalenii PYR-1 4649209 YP_954321.1 CDS Mvan_3520 NC_008726.1 3742474 3743640 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3742474..3743640) Mycobacterium vanbaalenii PYR-1 4649210 YP_954322.1 CDS Mvan_3521 NC_008726.1 3743834 3744733 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: mmc:Mmcs_3254 polypeptide-transport-associated, FtsQ-type; polypeptide-transport-associated domain-containing protein complement(3743834..3744733) Mycobacterium vanbaalenii PYR-1 4649211 YP_954323.1 CDS murC NC_008726.1 3744730 3746166 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3744730..3746166) Mycobacterium vanbaalenii PYR-1 4649212 YP_954324.1 CDS murG NC_008726.1 3746163 3747368 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3746163..3747368) Mycobacterium vanbaalenii PYR-1 4649213 YP_954325.1 CDS Mvan_3524 NC_008726.1 3747365 3748870 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mmc:Mmcs_3257 cell division protein FtsW; cell division protein FtsW complement(3747365..3748870) Mycobacterium vanbaalenii PYR-1 4649214 YP_954326.1 CDS murD NC_008726.1 3748884 3750335 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3748884..3750335) Mycobacterium vanbaalenii PYR-1 4649215 YP_954327.1 CDS mraY NC_008726.1 3750337 3751416 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3750337..3751416) Mycobacterium vanbaalenii PYR-1 4649216 YP_954328.1 CDS Mvan_3527 NC_008726.1 3751413 3752993 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: mmc:Mmcs_3260 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase complement(3751413..3752993) Mycobacterium vanbaalenii PYR-1 4649217 YP_954329.1 CDS murE NC_008726.1 3752990 3754483 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3752990..3754483) Mycobacterium vanbaalenii PYR-1 4649218 YP_954330.1 CDS Mvan_3529 NC_008726.1 3754589 3756547 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: mmc:Mmcs_3262 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(3754589..3756547) Mycobacterium vanbaalenii PYR-1 4649219 YP_954331.1 CDS Mvan_3530 NC_008726.1 3756544 3757551 R KEGG: mmc:Mmcs_3263 FHA domain containing protein; FHA domain-containing protein complement(3756544..3757551) Mycobacterium vanbaalenii PYR-1 4649220 YP_954332.1 CDS mraW NC_008726.1 3757554 3758690 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mpa:MAP1905c S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW complement(3757554..3758690) Mycobacterium vanbaalenii PYR-1 4649221 YP_954333.1 CDS Mvan_3532 NC_008726.1 3758665 3759099 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3758665..3759099) Mycobacterium vanbaalenii PYR-1 4647916 YP_954334.1 CDS Mvan_3533 NC_008726.1 3759403 3759807 R KEGG: mmc:Mmcs_3266 putative conserved transmembrane protein; putative transmembrane protein complement(3759403..3759807) Mycobacterium vanbaalenii PYR-1 4647917 YP_954335.1 CDS Mvan_3534 NC_008726.1 3760049 3760639 D PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_3267 hypothetical protein; N-acetyltransferase GCN5 3760049..3760639 Mycobacterium vanbaalenii PYR-1 4647918 YP_954336.1 CDS Mvan_3535 NC_008726.1 3760681 3761370 D KEGG: mmc:Mmcs_3268 LppM; LppM 3760681..3761370 Mycobacterium vanbaalenii PYR-1 4647919 YP_954337.1 CDS Mvan_3536 NC_008726.1 3761456 3762535 D PFAM: Polyprenyl synthetase; KEGG: mmc:Mmcs_3269 polyprenyl synthetase; polyprenyl synthetase 3761456..3762535 Mycobacterium vanbaalenii PYR-1 4647920 YP_954338.1 CDS Mvan_3537 NC_008726.1 3762540 3764129 D KEGG: mmc:Mmcs_3270 hypothetical protein; hypothetical protein 3762540..3764129 Mycobacterium vanbaalenii PYR-1 4647921 YP_954339.1 CDS Mvan_3538 NC_008726.1 3764050 3764481 R KEGG: mpa:MAP1913c hypothetical protein; hypothetical protein complement(3764050..3764481) Mycobacterium vanbaalenii PYR-1 4647922 YP_954340.1 CDS Mvan_3539 NC_008726.1 3764516 3765727 D PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_3272 serine/threonine protein kinase; protein kinase 3764516..3765727 Mycobacterium vanbaalenii PYR-1 4647923 YP_954341.1 CDS Mvan_3540 NC_008726.1 3765724 3767130 R KEGG: mmc:Mmcs_3273 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3765724..3767130) Mycobacterium vanbaalenii PYR-1 4647924 YP_954342.1 CDS Mvan_3541 NC_008726.1 3767276 3767767 R KEGG: mmc:Mmcs_3274 hypothetical protein; hypothetical protein complement(3767276..3767767) Mycobacterium vanbaalenii PYR-1 4647925 YP_954343.1 CDS Mvan_3542 NC_008726.1 3767769 3768659 R KEGG: mmc:Mmcs_3275 hypothetical protein; hypothetical protein complement(3767769..3768659) Mycobacterium vanbaalenii PYR-1 4647926 YP_954344.1 CDS Mvan_3543 NC_008726.1 3768744 3770030 D KEGG: mmc:Mmcs_3276 putative conserved integral membrane protein; putative integral membrane protein 3768744..3770030 Mycobacterium vanbaalenii PYR-1 4647927 YP_954345.1 CDS Mvan_3544 NC_008726.1 3770091 3770813 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1920c putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(3770091..3770813) Mycobacterium vanbaalenii PYR-1 4647928 YP_954346.1 CDS Mvan_3545 NC_008726.1 3770905 3771324 R KEGG: mmc:Mmcs_3278 hypothetical protein; hypothetical protein complement(3770905..3771324) Mycobacterium vanbaalenii PYR-1 4647929 YP_954347.1 CDS Mvan_3546 NC_008726.1 3771321 3772613 R PFAM: Anion-transporting ATPase; KEGG: mmc:Mmcs_3279 arsenite-transporting ATPase; arsenite-transporting ATPase complement(3771321..3772613) Mycobacterium vanbaalenii PYR-1 4647930 YP_954348.1 CDS Mvan_3547 NC_008726.1 3772600 3773037 R PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_3280 cyclase/dehydrase; cyclase/dehydrase complement(3772600..3773037) Mycobacterium vanbaalenii PYR-1 4647931 YP_954349.1 CDS Mvan_3548 NC_008726.1 3773109 3773498 R KEGG: mmc:Mmcs_3281 hypothetical protein; hypothetical protein complement(3773109..3773498) Mycobacterium vanbaalenii PYR-1 4647932 YP_954350.1 CDS Mvan_3549 NC_008726.1 3773604 3775412 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3282 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3773604..3775412 Mycobacterium vanbaalenii PYR-1 4647933 YP_954351.1 CDS Mvan_3550 NC_008726.1 3775409 3776545 R PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_3285 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3775409..3776545) Mycobacterium vanbaalenii PYR-1 4647934 YP_954352.1 CDS Mvan_3551 NC_008726.1 3776542 3777369 R KEGG: mmc:Mmcs_3286 hypothetical protein; hypothetical protein complement(3776542..3777369) Mycobacterium vanbaalenii PYR-1 4647935 YP_954353.1 CDS Mvan_3552 NC_008726.1 3777338 3778474 R PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_3287 NLP/P60; NLP/P60 protein complement(3777338..3778474) Mycobacterium vanbaalenii PYR-1 4647936 YP_954354.1 CDS Mvan_3553 NC_008726.1 3778808 3780256 R PFAM: transposase, IS4 family protein; KEGG: mmc:Mmcs_5428 TnpC protein; transposase, IS4 family protein complement(3778808..3780256) Mycobacterium vanbaalenii PYR-1 4647937 YP_954355.1 CDS Mvan_3554 NC_008726.1 3780270 3780614 R KEGG: mmc:Mmcs_3288 hypothetical protein; hypothetical protein complement(3780270..3780614) Mycobacterium vanbaalenii PYR-1 4647938 YP_954356.1 CDS trpD NC_008726.1 3782393 3783487 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(3782393..3783487) Mycobacterium vanbaalenii PYR-1 4647940 YP_954357.1 CDS Mvan_3557 NC_008726.1 3783506 3784168 D PFAM: cytochrome c oxidase, subunit III; KEGG: mpa:MAP1932 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 3783506..3784168 Mycobacterium vanbaalenii PYR-1 4644404 YP_954358.1 CDS Mvan_3558 NC_008726.1 3784222 3785043 D PFAM: cytochrome c, class I; KEGG: mmc:Mmcs_3292 cytochrome c, class I; class I cytochrome c 3784222..3785043 Mycobacterium vanbaalenii PYR-1 4644405 YP_954359.1 CDS Mvan_3559 NC_008726.1 3785040 3786248 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3293 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 3785040..3786248 Mycobacterium vanbaalenii PYR-1 4644406 YP_954360.1 CDS Mvan_3560 NC_008726.1 3786245 3787894 D PFAM: Cytochrome b/b6, N-terminal domain; KEGG: mmc:Mmcs_3294 cytochrome b/b6-like protein; cytochrome b/b6 domain-containing protein 3786245..3787894 Mycobacterium vanbaalenii PYR-1 4644407 YP_954361.1 CDS Mvan_3561 NC_008726.1 3788078 3788737 R KEGG: mmc:Mmcs_3295 hypothetical protein; hypothetical protein complement(3788078..3788737) Mycobacterium vanbaalenii PYR-1 4644408 YP_954362.1 CDS Mvan_3562 NC_008726.1 3788753 3789577 R KEGG: mmc:Mmcs_3296 putative conserved membrane protein MmpS3; putative membrane protein MmpS3 complement(3788753..3789577) Mycobacterium vanbaalenii PYR-1 4644409 YP_954363.1 CDS Mvan_3563 NC_008726.1 3789735 3790154 R KEGG: mmc:Mmcs_3297 putative conserved integral membrane protein; putative integral membrane protein complement(3789735..3790154) Mycobacterium vanbaalenii PYR-1 4644410 YP_954364.1 CDS Mvan_3564 NC_008726.1 3790164 3791198 R PFAM: cytochrome c oxidase, subunit II; KEGG: mbo:Mb2223c probable transmembrane cytochrome C oxidase (subunit II) CtaC; cytochrome c oxidase subunit II complement(3790164..3791198) Mycobacterium vanbaalenii PYR-1 4644411 YP_954365.1 CDS Mvan_3565 NC_008726.1 3791334 3793289 D TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: mmc:Mmcs_3299 asparagine synthase, glutamine-hydrolyzing; asparagine synthase 3791334..3793289 Mycobacterium vanbaalenii PYR-1 4644412 YP_954366.1 CDS Mvan_3566 NC_008726.1 3793302 3794273 R PFAM: PfkB domain protein; KEGG: mmc:Mmcs_3300 adenosine kinase; adenosine kinase complement(3793302..3794273) Mycobacterium vanbaalenii PYR-1 4644413 YP_954367.1 CDS Mvan_3567 NC_008726.1 3794463 3795104 D KEGG: mmc:Mmcs_3301 putative conserved membrane protein; hypothetical protein 3794463..3795104 Mycobacterium vanbaalenii PYR-1 4644414 YP_954368.1 CDS Mvan_3568 NC_008726.1 3795128 3795505 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mmc:Mmcs_3302 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein complement(3795128..3795505) Mycobacterium vanbaalenii PYR-1 4644415 YP_954369.1 CDS Mvan_3569 NC_008726.1 3795617 3796678 R PFAM: glycerate kinase; KEGG: mbo:Mb2228c glycerate kinase; glycerate kinase complement(3795617..3796678) Mycobacterium vanbaalenii PYR-1 4644416 YP_954370.1 CDS Mvan_3570 NC_008726.1 3796687 3797439 D KEGG: mmc:Mmcs_3303 hypothetical protein; hypothetical protein 3796687..3797439 Mycobacterium vanbaalenii PYR-1 4644417 YP_954371.1 CDS cobT NC_008726.1 3797448 3798491 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3797448..3798491 Mycobacterium vanbaalenii PYR-1 4644418 YP_954372.1 CDS cobS NC_008726.1 3798509 3799240 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 3798509..3799240 Mycobacterium vanbaalenii PYR-1 4644419 YP_954373.1 CDS Mvan_3573 NC_008726.1 3799237 3800340 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(3799237..3800340) Mycobacterium vanbaalenii PYR-1 4644420 YP_954374.1 CDS gcvT NC_008726.1 3800392 3801501 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(3800392..3801501) Mycobacterium vanbaalenii PYR-1 4644421 YP_954375.1 CDS Mvan_3575 NC_008726.1 3801547 3803079 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3801547..3803079 Mycobacterium vanbaalenii PYR-1 4644422 YP_954376.1 CDS Mvan_3576 NC_008726.1 3803084 3804700 R PFAM: alpha/beta hydrolase fold; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3311 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(3803084..3804700) Mycobacterium vanbaalenii PYR-1 4644423 YP_954377.1 CDS Mvan_3577 NC_008726.1 3804738 3806051 R PFAM: Alkaline phosphatase; KEGG: gka:GK2701 alkaline phosphatase; alkaline phosphatase complement(3804738..3806051) Mycobacterium vanbaalenii PYR-1 4644424 YP_954378.1 CDS Mvan_3578 NC_008726.1 3806134 3806484 R KEGG: mmc:Mmcs_3312 hypothetical protein; hypothetical protein complement(3806134..3806484) Mycobacterium vanbaalenii PYR-1 4644425 YP_954379.1 CDS Mvan_3579 NC_008726.1 3806645 3808387 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mmc:Mmcs_3313 catalytic domain of components of various dehydrogenase complexes; dihydrolipoamide acetyltransferase 3806645..3808387 Mycobacterium vanbaalenii PYR-1 4644426 YP_954380.1 CDS Mvan_3580 NC_008726.1 3808394 3809311 D PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: mmc:Mmcs_3314 hypothetical protein; hypothetical protein 3808394..3809311 Mycobacterium vanbaalenii PYR-1 4644427 YP_954381.1 CDS lipB NC_008726.1 3809304 3810020 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3809304..3810020 Mycobacterium vanbaalenii PYR-1 4644428 YP_954382.1 CDS Mvan_3582 NC_008726.1 3810017 3811015 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3810017..3811015 Mycobacterium vanbaalenii PYR-1 4644429 YP_954383.1 CDS Mvan_3583 NC_008726.1 3811020 3811772 D KEGG: mmc:Mmcs_3317 hypothetical protein; hypothetical protein 3811020..3811772 Mycobacterium vanbaalenii PYR-1 4647148 YP_954384.1 CDS Mvan_3584 NC_008726.1 3811798 3812265 R PFAM: RDD domain containing protein; KEGG: mmc:Mmcs_3319 RDD domain containing protein; RDD domain-containing protein complement(3811798..3812265) Mycobacterium vanbaalenii PYR-1 4647149 YP_954385.1 CDS Mvan_3585 NC_008726.1 3812410 3813846 D KEGG: mmc:Mmcs_3320 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 3812410..3813846 Mycobacterium vanbaalenii PYR-1 4647150 YP_954386.1 CDS Mvan_3588 NC_008726.1 3815463 3817406 R PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein complement(3815463..3817406) Mycobacterium vanbaalenii PYR-1 4647153 YP_954387.1 CDS Mvan_3589 NC_008726.1 3817403 3818452 R PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sha:SH1662 hypothetical protein; phage integrase family protein complement(3817403..3818452) Mycobacterium vanbaalenii PYR-1 4647154 YP_954388.1 CDS Mvan_3590 NC_008726.1 3818520 3819632 R PFAM: transposase, mutator type; KEGG: mtc:MT2587 IS1081, transposase; transposase, mutator type complement(3818520..3819632) Mycobacterium vanbaalenii PYR-1 4647155 YP_954389.1 CDS Mvan_3591 NC_008726.1 3819819 3820112 D hypothetical protein 3819819..3820112 Mycobacterium vanbaalenii PYR-1 4647156 YP_954390.1 CDS Mvan_3592 NC_008726.1 3820404 3821768 R hypothetical protein complement(3820404..3821768) Mycobacterium vanbaalenii PYR-1 4647157 YP_954391.1 CDS Mvan_3593 NC_008726.1 3821919 3822365 D PFAM: DoxX family protein; KEGG: mmc:Mmcs_3322 DoxX; DoxX family protein 3821919..3822365 Mycobacterium vanbaalenii PYR-1 4647158 YP_954392.1 CDS Mvan_3594 NC_008726.1 3822515 3825685 D TIGRFAM: putative outer membrane adhesin like proteiin; 40-residue YVTN family beta-propeller repeat protein; SMART: WD-40 repeat protein; KEGG: mba:Mbar_A3461 hypothetical protein; YVTN beta-propeller repeat-containing protein 3822515..3825685 Mycobacterium vanbaalenii PYR-1 4647159 YP_954393.1 CDS Mvan_3595 NC_008726.1 3825682 3826539 R PFAM: luciferase family protein; KEGG: mpa:MAP1963c hypothetical protein; luciferase family protein complement(3825682..3826539) Mycobacterium vanbaalenii PYR-1 4647160 YP_954394.1 CDS Mvan_3596 NC_008726.1 3826536 3827165 R KEGG: mpa:MAP1964c hypothetical protein; hypothetical protein complement(3826536..3827165) Mycobacterium vanbaalenii PYR-1 4647161 YP_954395.1 CDS Mvan_3597 NC_008726.1 3827216 3830197 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3827216..3830197) Mycobacterium vanbaalenii PYR-1 4647162 YP_954396.1 CDS Mvan_3598 NC_008726.1 3830236 3831576 R KEGG: mmc:Mmcs_3328 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I complement(3830236..3831576) Mycobacterium vanbaalenii PYR-1 4647163 YP_954397.1 CDS Mvan_3599 NC_008726.1 3831622 3833139 R PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mmc:Mmcs_3329 TAP-like protein; TAP domain-containing protein complement(3831622..3833139) Mycobacterium vanbaalenii PYR-1 4647164 YP_954398.1 CDS Mvan_3600 NC_008726.1 3833218 3834768 R PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mmc:Mmcs_3330 TAP-like protein; TAP domain-containing protein complement(3833218..3834768) Mycobacterium vanbaalenii PYR-1 4647165 YP_954399.1 CDS Mvan_3601 NC_008726.1 3834810 3836246 R PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3331 protein of unknown function UPF0089; hypothetical protein complement(3834810..3836246) Mycobacterium vanbaalenii PYR-1 4647166 YP_954400.1 CDS panB NC_008726.1 3836361 3837203 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3836361..3837203 Mycobacterium vanbaalenii PYR-1 4647167 YP_954401.1 CDS Mvan_3603 NC_008726.1 3837318 3838112 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3333 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(3837318..3838112) Mycobacterium vanbaalenii PYR-1 4647168 YP_954402.1 CDS Mvan_3604 NC_008726.1 3838129 3839910 R activates fatty acids by binding to coenzyme A; putative fatty-acid--CoA ligase complement(3838129..3839910) Mycobacterium vanbaalenii PYR-1 4647169 YP_954403.1 CDS Mvan_3605 NC_008726.1 3840020 3841573 D PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mmc:Mmcs_3334 CHAD domain containing protein; CHAD domain-containing protein 3840020..3841573 Mycobacterium vanbaalenii PYR-1 4647170 YP_954404.1 CDS Mvan_3606 NC_008726.1 3841749 3842321 D hypothetical protein 3841749..3842321 Mycobacterium vanbaalenii PYR-1 4647171 YP_954405.1 CDS Mvan_3607 NC_008726.1 3842335 3843492 R hypothetical protein complement(3842335..3843492) Mycobacterium vanbaalenii PYR-1 4647172 YP_954406.1 CDS Mvan_3608 NC_008726.1 3843676 3844062 R KEGG: cef:CE0839 hypothetical protein; hypothetical protein complement(3843676..3844062) Mycobacterium vanbaalenii PYR-1 4647173 YP_954407.1 CDS Mvan_3609 NC_008726.1 3844062 3844307 R hypothetical protein complement(3844062..3844307) Mycobacterium vanbaalenii PYR-1 4647174 YP_954408.1 CDS Mvan_3610 NC_008726.1 3844490 3844963 R hypothetical protein complement(3844490..3844963) Mycobacterium vanbaalenii PYR-1 4647175 YP_954409.1 CDS Mvan_3612 NC_008726.1 3845880 3846314 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_3335 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 3845880..3846314 Mycobacterium vanbaalenii PYR-1 4647178 YP_954410.1 CDS Mvan_3613 NC_008726.1 3846340 3846774 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3336 lyase; glyoxalase/bleomycin resistance protein/dioxygenase 3846340..3846774 Mycobacterium vanbaalenii PYR-1 4647179 YP_954411.1 CDS Mvan_3614 NC_008726.1 3846799 3848199 R KEGG: mmc:Mmcs_4699 hypothetical protein; hypothetical protein complement(3846799..3848199) Mycobacterium vanbaalenii PYR-1 4647180 YP_954412.1 CDS Mvan_3615 NC_008726.1 3848225 3848845 R PFAM: methyltransferase small; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP1977c hypothetical protein; type 11 methyltransferase complement(3848225..3848845) Mycobacterium vanbaalenii PYR-1 4647181 YP_954413.1 CDS Mvan_3616 NC_008726.1 3848842 3849756 R PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3340 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3848842..3849756) Mycobacterium vanbaalenii PYR-1 4647182 YP_954414.1 CDS Mvan_3617 NC_008726.1 3849803 3850390 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: mpa:MAP1978 hypothetical protein; XRE family transcriptional regulator 3849803..3850390 Mycobacterium vanbaalenii PYR-1 4647183 YP_954415.1 CDS Mvan_3618 NC_008726.1 3850381 3851490 R PFAM: ribonuclease H; Phosphoglycerate mutase; KEGG: mmc:Mmcs_3342 phosphoglycerate mutase; bifunctional RNase H/acid phosphatase complement(3850381..3851490) Mycobacterium vanbaalenii PYR-1 4647184 YP_954416.1 CDS Mvan_3619 NC_008726.1 3851487 3852224 R PFAM: protein of unknown function DUF164; KEGG: mmc:Mmcs_3343 protein of unknown function DUF164; hypothetical protein complement(3851487..3852224) Mycobacterium vanbaalenii PYR-1 4647185 YP_954417.1 CDS Mvan_3620 NC_008726.1 3852226 3853350 R PFAM: protein of unknown function DUF34; KEGG: mmc:Mmcs_3344 protein of unknown function DUF34; hypothetical protein complement(3852226..3853350) Mycobacterium vanbaalenii PYR-1 4647186 YP_954418.1 CDS Mvan_3621 NC_008726.1 3853424 3854110 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_3346 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 3853424..3854110 Mycobacterium vanbaalenii PYR-1 4647187 YP_954419.1 CDS Mvan_3622 NC_008726.1 3854103 3854597 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_3347 protein tyrosine phosphatase; protein tyrosine phosphatase 3854103..3854597 Mycobacterium vanbaalenii PYR-1 4647188 YP_954420.1 CDS Mvan_3623 NC_008726.1 3854600 3855442 D KEGG: mmc:Mmcs_3348 putative conserved transmembrane protein; putative transmembrane protein 3854600..3855442 Mycobacterium vanbaalenii PYR-1 4647189 YP_954421.1 CDS cobD NC_008726.1 3855396 3856349 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(3855396..3856349) Mycobacterium vanbaalenii PYR-1 4647190 YP_954422.1 CDS Mvan_3625 NC_008726.1 3856452 3858122 D PFAM: Amidohydrolase 3; KEGG: mpa:MAP4049 hypothetical protein; amidohydrolase 3 3856452..3858122 Mycobacterium vanbaalenii PYR-1 4647191 YP_954423.1 CDS Mvan_3626 NC_008726.1 3858209 3860779 D PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: tfu:Tfu_2794 hypothetical protein; multicopper oxidase, type 3 3858209..3860779 Mycobacterium vanbaalenii PYR-1 4647192 YP_954424.1 CDS Mvan_3627 NC_008726.1 3860776 3861225 D KEGG: tfu:Tfu_2795 hypothetical protein; hypothetical protein 3860776..3861225 Mycobacterium vanbaalenii PYR-1 4647193 YP_954425.1 CDS Mvan_3628 NC_008726.1 3861257 3861856 D PFAM: SOUL heme-binding protein; KEGG: mmc:Mmcs_2896 SOUL heme-binding protein; SOUL heme-binding protein 3861257..3861856 Mycobacterium vanbaalenii PYR-1 4647194 YP_954426.1 CDS Mvan_3629 NC_008726.1 3862007 3864559 D KEGG: pca:Pcar_2558 signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 3862007..3864559 Mycobacterium vanbaalenii PYR-1 4647195 YP_954427.1 CDS Mvan_3630 NC_008726.1 3865057 3865575 D SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3865057..3865575 Mycobacterium vanbaalenii PYR-1 4647196 YP_954428.1 CDS Mvan_3631 NC_008726.1 3865575 3866156 D KEGG: mbo:Mb0764c hypothetical protein; hypothetical protein 3865575..3866156 Mycobacterium vanbaalenii PYR-1 4647197 YP_954429.1 CDS Mvan_3632 NC_008726.1 3866190 3868136 R hypothetical protein complement(3866190..3868136) Mycobacterium vanbaalenii PYR-1 4649323 YP_954430.1 CDS Mvan_3633 NC_008726.1 3868548 3869786 R hypothetical protein complement(3868548..3869786) Mycobacterium vanbaalenii PYR-1 4649324 YP_954431.1 CDS Mvan_3634 NC_008726.1 3870317 3870601 D PFAM: regulatory protein, ArsR; KEGG: tfu:Tfu_1568 regulatory protein, ArsR; regulatory protein ArsR 3870317..3870601 Mycobacterium vanbaalenii PYR-1 4649325 YP_954432.1 CDS Mvan_3635 NC_008726.1 3870598 3871314 D KEGG: mbo:Mb3299c probable conserved integral membrane protein; putative integral membrane protein 3870598..3871314 Mycobacterium vanbaalenii PYR-1 4649326 YP_954433.1 CDS Mvan_3636 NC_008726.1 3871564 3871848 D KEGG: fra:Francci3_2227 conserved hypothetical protein; hypothetical protein 3871564..3871848 Mycobacterium vanbaalenii PYR-1 4649327 YP_954434.1 CDS Mvan_3637 NC_008726.1 3871845 3872471 D KEGG: mlo:mlr6585 hypothetical protein; hypothetical protein 3871845..3872471 Mycobacterium vanbaalenii PYR-1 4649328 YP_954435.1 CDS Mvan_3638 NC_008726.1 3872556 3872984 D PFAM: protein of unknown function DUF302; KEGG: mpa:MAP3536 hypothetical protein; hypothetical protein 3872556..3872984 Mycobacterium vanbaalenii PYR-1 4649329 YP_954436.1 CDS Mvan_3639 NC_008726.1 3873055 3873516 D KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein 3873055..3873516 Mycobacterium vanbaalenii PYR-1 4649330 YP_954437.1 CDS Mvan_3640 NC_008726.1 3874048 3874452 D PFAM: regulatory protein, ArsR; KEGG: nfa:pnf1320 putative transcriptional regulator; regulatory protein ArsR 3874048..3874452 Mycobacterium vanbaalenii PYR-1 4649331 YP_954438.1 CDS Mvan_3641 NC_008726.1 3874452 3876422 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nfa:pnf1330 putative cation-transporting ATPase; heavy metal translocating P-type ATPase 3874452..3876422 Mycobacterium vanbaalenii PYR-1 4649332 YP_954439.1 CDS Mvan_3642 NC_008726.1 3876490 3877098 D PFAM: cadmium resistance transporter; KEGG: cgb:cg1033 cadmium resistance transporter; cadmium resistance transporter 3876490..3877098 Mycobacterium vanbaalenii PYR-1 4649333 YP_954440.1 CDS Mvan_3643 NC_008726.1 3877421 3877615 D KEGG: mbo:Mb3666c hypothetical protein; hypothetical protein 3877421..3877615 Mycobacterium vanbaalenii PYR-1 4649334 YP_954441.1 CDS Mvan_3644 NC_008726.1 3877628 3878266 D PFAM: filamentation induced by cAMP protein Fic; KEGG: mbo:Mb3665c possible cell filamentation protein Fic; filamentation induced by cAMP protein fic 3877628..3878266 Mycobacterium vanbaalenii PYR-1 4649335 YP_954442.1 CDS Mvan_3646 NC_008726.1 3879287 3879748 R KEGG: sma:SAV4430 hypothetical protein; hypothetical protein complement(3879287..3879748) Mycobacterium vanbaalenii PYR-1 4649337 YP_954443.1 CDS Mvan_3648 NC_008726.1 3880351 3881211 D KEGG: mmc:Mmcs_1464 hypothetical protein; hypothetical protein 3880351..3881211 Mycobacterium vanbaalenii PYR-1 4649339 YP_954444.1 CDS Mvan_3649 NC_008726.1 3881783 3882553 D SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1434 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 3881783..3882553 Mycobacterium vanbaalenii PYR-1 4649340 YP_954445.1 CDS Mvan_3651 NC_008726.1 3883913 3885136 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_1448 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 3883913..3885136 Mycobacterium vanbaalenii PYR-1 4649342 YP_954446.1 CDS Mvan_3652 NC_008726.1 3885659 3886432 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1447 NLP/P60; NLP/P60 protein 3885659..3886432 Mycobacterium vanbaalenii PYR-1 4649343 YP_954447.1 CDS Mvan_3653 NC_008726.1 3886496 3887188 R PFAM: transcriptional regulator domain protein; KEGG: mmc:Mmcs_1446 response regulator receiver protein; response regulator receiver protein complement(3886496..3887188) Mycobacterium vanbaalenii PYR-1 4649344 YP_954448.1 CDS Mvan_3654 NC_008726.1 3887618 3888538 R KEGG: mmc:Mmcs_1442 hypothetical protein; hypothetical protein complement(3887618..3888538) Mycobacterium vanbaalenii PYR-1 4649345 YP_954449.1 CDS Mvan_3655 NC_008726.1 3888535 3888900 R PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_1441 transcriptional repressor, CopY family; CopY family transcriptional regulator complement(3888535..3888900) Mycobacterium vanbaalenii PYR-1 4649346 YP_954450.1 CDS Mvan_3656 NC_008726.1 3889281 3890690 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1440 NLP/P60; NLP/P60 protein 3889281..3890690 Mycobacterium vanbaalenii PYR-1 4649347 YP_954451.1 CDS Mvan_3657 NC_008726.1 3891053 3891328 D KEGG: mmc:Mmcs_1439 two component transcriptional regulator, winged helix family; response regulator receiver protein 3891053..3891328 Mycobacterium vanbaalenii PYR-1 4644355 YP_954452.1 CDS Mvan_3658 NC_008726.1 3891677 3891916 D hypothetical protein 3891677..3891916 Mycobacterium vanbaalenii PYR-1 4644356 YP_954453.1 CDS Mvan_3659 NC_008726.1 3892468 3893361 R PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit complement(3892468..3893361) Mycobacterium vanbaalenii PYR-1 4644357 YP_954454.1 CDS Mvan_3660 NC_008726.1 3893358 3893675 R PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein complement(3893358..3893675) Mycobacterium vanbaalenii PYR-1 4644358 YP_954455.1 CDS Mvan_3662 NC_008726.1 3894833 3895060 D KEGG: nfa:pnf1860 hypothetical protein; hypothetical protein 3894833..3895060 Mycobacterium vanbaalenii PYR-1 4644360 YP_954456.1 CDS Mvan_3663 NC_008726.1 3895097 3895858 D KEGG: mmc:Mmcs_1457 hypothetical protein; hypothetical protein 3895097..3895858 Mycobacterium vanbaalenii PYR-1 4644361 YP_954457.1 CDS Mvan_3664 NC_008726.1 3895855 3896586 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_1458 ABC transporter related; ABC transporter--like protein 3895855..3896586 Mycobacterium vanbaalenii PYR-1 4644362 YP_954458.1 CDS Mvan_3665 NC_008726.1 3896567 3898066 D KEGG: mmc:Mmcs_1459 putative ABC transporter membrane protein; putative ABC transporter membrane protein 3896567..3898066 Mycobacterium vanbaalenii PYR-1 4644363 YP_954459.1 CDS Mvan_3666 NC_008726.1 3898066 3898473 D KEGG: mmc:Mmcs_1460 hypothetical protein; hypothetical protein 3898066..3898473 Mycobacterium vanbaalenii PYR-1 4644364 YP_954460.1 CDS Mvan_3667 NC_008726.1 3898625 3899152 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_1462 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 3898625..3899152 Mycobacterium vanbaalenii PYR-1 4644365 YP_954461.1 CDS Mvan_3668 NC_008726.1 3899380 3899673 D PFAM: protein of unknown function DUF156; KEGG: mpa:MAP3746 hypothetical protein; hypothetical protein 3899380..3899673 Mycobacterium vanbaalenii PYR-1 4644366 YP_954462.1 CDS Mvan_3669 NC_008726.1 3899836 3900078 D PFAM: Heavy metal transport/detoxification protein; KEGG: nfa:nfa49020 putative metal-binding protein; heavy metal transport/detoxification protein 3899836..3900078 Mycobacterium vanbaalenii PYR-1 4644367 YP_954463.1 CDS Mvan_3670 NC_008726.1 3900118 3902466 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_3948 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3900118..3902466 Mycobacterium vanbaalenii PYR-1 4644368 YP_954464.1 CDS Mvan_3671 NC_008726.1 3902548 3902802 R KEGG: mmc:Mmcs_1463 hypothetical protein; hypothetical protein complement(3902548..3902802) Mycobacterium vanbaalenii PYR-1 4644369 YP_954465.1 CDS Mvan_3672 NC_008726.1 3902908 3904473 R PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: mtc:MT0869 copper-binding protein, putative; multicopper oxidase, type 2 complement(3902908..3904473) Mycobacterium vanbaalenii PYR-1 4644370 YP_954466.1 CDS Mvan_3673 NC_008726.1 3904470 3904697 R hypothetical protein complement(3904470..3904697) Mycobacterium vanbaalenii PYR-1 4644371 YP_954467.1 CDS Mvan_3674 NC_008726.1 3904824 3905564 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_1439 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3904824..3905564 Mycobacterium vanbaalenii PYR-1 4644372 YP_954468.1 CDS Mvan_3675 NC_008726.1 3905561 3906700 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_1438 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3905561..3906700 Mycobacterium vanbaalenii PYR-1 4644373 YP_954469.1 CDS Mvan_3676 NC_008726.1 3906769 3907500 R PFAM: protein of unknown function DUF305; KEGG: rha:RHA1_ro11207 hypothetical protein; hypothetical protein complement(3906769..3907500) Mycobacterium vanbaalenii PYR-1 4644374 YP_954470.1 CDS Mvan_3677 NC_008726.1 3907721 3908134 D PFAM: protein of unknown function DUF302; KEGG: rha:RHA1_ro11241 hypothetical protein; hypothetical protein 3907721..3908134 Mycobacterium vanbaalenii PYR-1 4644375 YP_954471.1 CDS Mvan_3678 NC_008726.1 3908171 3910561 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1461 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase complement(3908171..3910561) Mycobacterium vanbaalenii PYR-1 4644376 YP_954472.1 CDS Mvan_3679 NC_008726.1 3911346 3911846 R hypothetical protein complement(3911346..3911846) Mycobacterium vanbaalenii PYR-1 4644377 YP_954473.1 CDS Mvan_3680 NC_008726.1 3911924 3912265 R KEGG: mmc:Mmcs_1470 hypothetical protein; hypothetical protein complement(3911924..3912265) Mycobacterium vanbaalenii PYR-1 4644378 YP_954474.1 CDS Mvan_3681 NC_008726.1 3912299 3914431 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1469 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(3912299..3914431) Mycobacterium vanbaalenii PYR-1 4644379 YP_954475.1 CDS Mvan_3682 NC_008726.1 3914424 3914807 R PFAM: regulatory protein, ArsR; KEGG: ttj:TTHA0705 transcriptional repressor SmtB; regulatory protein ArsR complement(3914424..3914807) Mycobacterium vanbaalenii PYR-1 4643734 YP_954476.1 CDS Mvan_3683 NC_008726.1 3914963 3915931 R KEGG: mmc:Mmcs_1433 hypothetical protein; hypothetical protein complement(3914963..3915931) Mycobacterium vanbaalenii PYR-1 4643735 YP_954477.1 CDS Mvan_3684 NC_008726.1 3915979 3916842 R SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1434 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(3915979..3916842) Mycobacterium vanbaalenii PYR-1 4643736 YP_954478.1 CDS Mvan_3685 NC_008726.1 3916922 3917545 R KEGG: nfa:pnf1430 hypothetical protein; hypothetical protein complement(3916922..3917545) Mycobacterium vanbaalenii PYR-1 4643737 YP_954479.1 CDS Mvan_3687 NC_008726.1 3917813 3918292 R KEGG: mpa:MAP2507c hypothetical protein; putative adenylate/guanylate cyclase complement(3917813..3918292) Mycobacterium vanbaalenii PYR-1 4643739 YP_954480.1 CDS Mvan_3688 NC_008726.1 3918844 3919590 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1447 NLP/P60; NLP/P60 protein 3918844..3919590 Mycobacterium vanbaalenii PYR-1 4643740 YP_954481.1 CDS Mvan_3689 NC_008726.1 3919998 3920759 R KEGG: nfa:nfa25430 hypothetical protein; hypothetical protein complement(3919998..3920759) Mycobacterium vanbaalenii PYR-1 4643741 YP_954482.1 CDS Mvan_3690 NC_008726.1 3921193 3921852 D PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase; DSBA oxidoreductase 3921193..3921852 Mycobacterium vanbaalenii PYR-1 4643742 YP_954483.1 CDS Mvan_3691 NC_008726.1 3921923 3922516 R PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_1437 protein of unknown function DUF305; hypothetical protein complement(3921923..3922516) Mycobacterium vanbaalenii PYR-1 4643743 YP_954484.1 CDS Mvan_3692 NC_008726.1 3922513 3924441 R PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_3617 copper resistance D; copper resistance D domain-containing protein complement(3922513..3924441) Mycobacterium vanbaalenii PYR-1 4643744 YP_954485.1 CDS Mvan_3693 NC_008726.1 3924557 3925327 R PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mmc:Mmcs_0693 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein complement(3924557..3925327) Mycobacterium vanbaalenii PYR-1 4643745 YP_954486.1 CDS Mvan_3694 NC_008726.1 3925502 3926458 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_0151 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 3925502..3926458 Mycobacterium vanbaalenii PYR-1 4643746 YP_954487.1 CDS Mvan_3696 NC_008726.1 3927975 3928256 D KEGG: nfa:pnf1300 hypothetical protein; hypothetical protein 3927975..3928256 Mycobacterium vanbaalenii PYR-1 4643748 YP_954488.1 CDS Mvan_3697 NC_008726.1 3928321 3928689 D KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein 3928321..3928689 Mycobacterium vanbaalenii PYR-1 4643749 YP_954489.1 CDS Mvan_3698 NC_008726.1 3928860 3929456 D KEGG: mmc:Mmcs_1159 hypothetical protein; hypothetical protein 3928860..3929456 Mycobacterium vanbaalenii PYR-1 4643750 YP_954490.1 CDS Mvan_3699 NC_008726.1 3930146 3930967 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpa:MAP2507c hypothetical protein; putative adenylate/guanylate cyclase complement(3930146..3930967) Mycobacterium vanbaalenii PYR-1 4643751 YP_954491.1 CDS Mvan_3700 NC_008726.1 3930964 3933522 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sal:Sala_2582 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(3930964..3933522) Mycobacterium vanbaalenii PYR-1 4643752 YP_954492.1 CDS Mvan_3701 NC_008726.1 3934508 3936694 R PFAM: acyltransferase 3; KEGG: mbo:Mb1592c hypothetical protein; acyltransferase 3 complement(3934508..3936694) Mycobacterium vanbaalenii PYR-1 4643753 YP_954493.1 CDS Mvan_3702 NC_008726.1 3936798 3937778 R PFAM: cytochrome c assembly protein; KEGG: mmc:Mmcs_0695 cytochrome c assembly protein; cytochrome c assembly protein complement(3936798..3937778) Mycobacterium vanbaalenii PYR-1 4643754 YP_954494.1 CDS Mvan_3703 NC_008726.1 3937948 3938442 R hypothetical protein complement(3937948..3938442) Mycobacterium vanbaalenii PYR-1 4643755 YP_954495.1 CDS Mvan_3704 NC_008726.1 3938593 3940338 R PFAM: cytochrome c oxidase, subunit I; KEGG: mmc:Mmcs_1852 cytochrome-c oxidase; cytochrome-c oxidase complement(3938593..3940338) Mycobacterium vanbaalenii PYR-1 4643756 YP_954496.1 CDS Mvan_3705 NC_008726.1 3940850 3941872 D PFAM: peptidase M23B; KEGG: mpa:MAP0895c hypothetical protein; peptidase M23B 3940850..3941872 Mycobacterium vanbaalenii PYR-1 4643757 YP_954497.1 CDS Mvan_3706 NC_008726.1 3941932 3942432 D PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_1441 transcriptional repressor, CopY family; CopY family transcriptional regulator 3941932..3942432 Mycobacterium vanbaalenii PYR-1 4643758 YP_954498.1 CDS Mvan_3707 NC_008726.1 3942429 3943373 D PFAM: peptidase M48, Ste24p; KEGG: mmc:Mmcs_1442 hypothetical protein; peptidase M48, Ste24p 3942429..3943373 Mycobacterium vanbaalenii PYR-1 4643759 YP_954499.1 CDS Mvan_3708 NC_008726.1 3943860 3944498 D KEGG: mmc:Mmcs_5320 protein of unknown function DUF305; hypothetical protein 3943860..3944498 Mycobacterium vanbaalenii PYR-1 4643958 YP_954500.1 CDS Mvan_3709 NC_008726.1 3944565 3945545 R KEGG: nfa:pnf1500 putative membrane protein; hypothetical protein complement(3944565..3945545) Mycobacterium vanbaalenii PYR-1 4643959 YP_954501.1 CDS Mvan_3710 NC_008726.1 3945646 3946302 R PFAM: Redoxin domain protein; KEGG: mmc:Mmcs_0692 redoxin; redoxin domain-containing protein complement(3945646..3946302) Mycobacterium vanbaalenii PYR-1 4643960 YP_954502.1 CDS Mvan_3711 NC_008726.1 3946628 3946987 R hypothetical protein complement(3946628..3946987) Mycobacterium vanbaalenii PYR-1 4643961 YP_954503.1 CDS Mvan_3712 NC_008726.1 3946984 3947577 R PFAM: cytochrome c oxidase, subunit III; KEGG: mpa:MAP1932 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III complement(3946984..3947577) Mycobacterium vanbaalenii PYR-1 4643962 YP_954504.1 CDS Mvan_3713 NC_008726.1 3947917 3948963 D PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1435 NLP/P60; NLP/P60 protein 3947917..3948963 Mycobacterium vanbaalenii PYR-1 4643963 YP_954505.1 CDS Mvan_3714 NC_008726.1 3949047 3949727 D PFAM: copper resistance protein CopC; KEGG: fra:Francci3_2794 copper resistance protein CopC; copper resistance protein CopC 3949047..3949727 Mycobacterium vanbaalenii PYR-1 4643964 YP_954506.1 CDS Mvan_3715 NC_008726.1 3949680 3950150 R hypothetical protein complement(3949680..3950150) Mycobacterium vanbaalenii PYR-1 4643965 YP_954507.1 CDS Mvan_3716 NC_008726.1 3950279 3951052 D PFAM: Abortive infection protein; KEGG: mmc:Mmcs_5036 abortive infection protein; abortive infection protein 3950279..3951052 Mycobacterium vanbaalenii PYR-1 4643966 YP_954508.1 CDS Mvan_3717 NC_008726.1 3951620 3952348 D KEGG: mbo:Mb1050 putative conserved lipoprotein LpqU; putative lipoprotein LpqU 3951620..3952348 Mycobacterium vanbaalenii PYR-1 4643967 YP_954509.1 CDS Mvan_3719 NC_008726.1 3952851 3953168 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 3952851..3953168 Mycobacterium vanbaalenii PYR-1 4643969 YP_954510.1 CDS Mvan_3720 NC_008726.1 3953165 3954058 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 3953165..3954058 Mycobacterium vanbaalenii PYR-1 4643970 YP_954511.1 CDS Mvan_3722 NC_008726.1 3955099 3956643 D KEGG: tfu:Tfu_2255 hypothetical protein; hypothetical protein 3955099..3956643 Mycobacterium vanbaalenii PYR-1 4643972 YP_954512.1 CDS Mvan_3723 NC_008726.1 3956675 3957940 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_2281 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(3956675..3957940) Mycobacterium vanbaalenii PYR-1 4643973 YP_954513.1 CDS Mvan_3724 NC_008726.1 3958320 3959681 R KEGG: mmc:Mmcs_5112 hypothetical protein; hypothetical protein complement(3958320..3959681) Mycobacterium vanbaalenii PYR-1 4643974 YP_954514.1 CDS Mvan_3725 NC_008726.1 3959678 3960127 R KEGG: mmc:Mmcs_5111 hypothetical protein; hypothetical protein complement(3959678..3960127) Mycobacterium vanbaalenii PYR-1 4643975 YP_954515.1 CDS Mvan_3726 NC_008726.1 3961200 3962345 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmc:Mmcs_1489 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(3961200..3962345) Mycobacterium vanbaalenii PYR-1 4643976 YP_954516.1 CDS Mvan_3727 NC_008726.1 3962348 3962761 R PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_1488 transcriptional regulator, ArsR family; regulatory protein ArsR complement(3962348..3962761) Mycobacterium vanbaalenii PYR-1 4643977 YP_954517.1 CDS Mvan_3728 NC_008726.1 3962947 3963306 R PFAM: regulatory protein, ArsR; KEGG: mpa:MAP0661c hypothetical protein; regulatory protein ArsR complement(3962947..3963306) Mycobacterium vanbaalenii PYR-1 4643978 YP_954518.1 CDS Mvan_3729 NC_008726.1 3963376 3965403 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nfa:nfa31060 putative cation-transporting ATPase; heavy metal translocating P-type ATPase 3963376..3965403 Mycobacterium vanbaalenii PYR-1 4643979 YP_954519.1 CDS Mvan_3731 NC_008726.1 3965679 3966461 D hypothetical protein 3965679..3966461 Mycobacterium vanbaalenii PYR-1 4643981 YP_954520.1 CDS Mvan_3732 NC_008726.1 3966592 3967095 R KEGG: mmc:Mmcs_1432 hypothetical protein; hypothetical protein complement(3966592..3967095) Mycobacterium vanbaalenii PYR-1 4643982 YP_954521.1 CDS Mvan_3733 NC_008726.1 3967429 3967899 R KEGG: mmc:Mmcs_1431 hypothetical protein; hypothetical protein complement(3967429..3967899) Mycobacterium vanbaalenii PYR-1 4646798 YP_954522.1 CDS Mvan_3734 NC_008726.1 3968222 3974080 D KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein; exonuclease V subunit alpha 3968222..3974080 Mycobacterium vanbaalenii PYR-1 4646799 YP_954523.1 CDS Mvan_3735 NC_008726.1 3974436 3975083 R hypothetical protein complement(3974436..3975083) Mycobacterium vanbaalenii PYR-1 4646800 YP_954524.1 CDS Mvan_3736 NC_008726.1 3975080 3977500 R KEGG: mmc:Mmcs_1428 hypothetical protein; hypothetical protein complement(3975080..3977500) Mycobacterium vanbaalenii PYR-1 4646801 YP_954525.1 CDS Mvan_3737 NC_008726.1 3977500 3978093 R KEGG: mmc:Mmcs_1427 hypothetical protein; hypothetical protein complement(3977500..3978093) Mycobacterium vanbaalenii PYR-1 4646802 YP_954526.1 CDS Mvan_3738 NC_008726.1 3978975 3979325 D hypothetical protein 3978975..3979325 Mycobacterium vanbaalenii PYR-1 4646803 YP_954527.1 CDS Mvan_3739 NC_008726.1 3979710 3980027 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 3979710..3980027 Mycobacterium vanbaalenii PYR-1 4646804 YP_954528.1 CDS Mvan_3740 NC_008726.1 3980024 3980917 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 3980024..3980917 Mycobacterium vanbaalenii PYR-1 4646805 YP_954529.1 CDS Mvan_3741 NC_008726.1 3980932 3981765 R PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_3191 integrase, catalytic region; integrase catalytic subunit complement(3980932..3981765) Mycobacterium vanbaalenii PYR-1 4646806 YP_954530.1 CDS Mvan_3742 NC_008726.1 3981762 3982094 R PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3190 transposase IS3/IS911; transposase IS3/IS911 family protein complement(3981762..3982094) Mycobacterium vanbaalenii PYR-1 4646807 YP_954531.1 CDS Mvan_3743 NC_008726.1 3982550 3982867 R hypothetical protein complement(3982550..3982867) Mycobacterium vanbaalenii PYR-1 4646808 YP_954532.1 CDS Mvan_3744 NC_008726.1 3982952 3983194 R KEGG: mmc:Mmcs_1425 hypothetical protein; hypothetical protein complement(3982952..3983194) Mycobacterium vanbaalenii PYR-1 4646809 YP_954533.1 CDS Mvan_3745 NC_008726.1 3983234 3983962 R KEGG: mmc:Mmcs_1424 hypothetical protein; hypothetical protein complement(3983234..3983962) Mycobacterium vanbaalenii PYR-1 4646810 YP_954534.1 CDS Mvan_3746 NC_008726.1 3984655 3985464 D KEGG: mmc:Mmcs_1423 hypothetical protein; hypothetical protein 3984655..3985464 Mycobacterium vanbaalenii PYR-1 4646811 YP_954535.1 CDS Mvan_3747 NC_008726.1 3985746 3987161 D PFAM: phage integrase family protein; KEGG: sco:SCO3250 integrase; phage integrase family protein 3985746..3987161 Mycobacterium vanbaalenii PYR-1 4646812 YP_954536.1 CDS Mvan_3748 NC_008726.1 3987545 3988402 R hypothetical protein complement(3987545..3988402) Mycobacterium vanbaalenii PYR-1 4646813 YP_954537.1 CDS Mvan_3749 NC_008726.1 3988729 3989193 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mmc:Mmcs_3359 redoxin; redoxin domain-containing protein complement(3988729..3989193) Mycobacterium vanbaalenii PYR-1 4646815 YP_954538.1 CDS Mvan_3750 NC_008726.1 3989258 3989686 R KEGG: mmc:Mmcs_3360 hypothetical protein; hypothetical protein complement(3989258..3989686) Mycobacterium vanbaalenii PYR-1 4646816 YP_954539.1 CDS Mvan_3751 NC_008726.1 3989791 3990339 R KEGG: mmc:Mmcs_3361 hypothetical protein; hypothetical protein complement(3989791..3990339) Mycobacterium vanbaalenii PYR-1 4646817 YP_954540.1 CDS aceE NC_008726.1 3990551 3993325 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 3990551..3993325 Mycobacterium vanbaalenii PYR-1 4646818 YP_954541.1 CDS Mvan_3753 NC_008726.1 3993485 3994771 D KEGG: mmc:Mmcs_3363 hypothetical protein; hypothetical protein 3993485..3994771 Mycobacterium vanbaalenii PYR-1 4646819 YP_954542.1 CDS Mvan_3754 NC_008726.1 3994900 3995844 D KEGG: mmc:Mmcs_3364 (acyl-carrier protein) S-malonyltransferase; (acyl-carrier protein) S-malonyltransferase 3994900..3995844 Mycobacterium vanbaalenii PYR-1 4646820 YP_954543.1 CDS acpP NC_008726.1 3995913 3996212 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3995913..3996212 Mycobacterium vanbaalenii PYR-1 4646821 YP_954544.1 CDS Mvan_3756 NC_008726.1 3996209 3997459 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 3996209..3997459 Mycobacterium vanbaalenii PYR-1 4645119 YP_954545.1 CDS Mvan_3757 NC_008726.1 3997505 3998758 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 3997505..3998758 Mycobacterium vanbaalenii PYR-1 4645120 YP_954546.1 CDS Mvan_3758 NC_008726.1 3998782 4000215 D PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3368 propionyl-CoA carboxylase; propionyl-CoA carboxylase 3998782..4000215 Mycobacterium vanbaalenii PYR-1 4645121 YP_954547.1 CDS Mvan_3759 NC_008726.1 4000251 4001804 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3372 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4000251..4001804) Mycobacterium vanbaalenii PYR-1 4645122 YP_954548.1 CDS Mvan_3760 NC_008726.1 4001801 4002379 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3373 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4001801..4002379) Mycobacterium vanbaalenii PYR-1 4645123 YP_954549.1 CDS Mvan_3761 NC_008726.1 4002397 4003980 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_3374 alkylglycerone-phosphate synthase; alkylglycerone-phosphate synthase 4002397..4003980 Mycobacterium vanbaalenii PYR-1 4645124 YP_954550.1 CDS Mvan_3762 NC_008726.1 4003977 4004879 D involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids; diacylglycerol kinase 4003977..4004879 Mycobacterium vanbaalenii PYR-1 4645125 YP_954551.1 CDS Mvan_3763 NC_008726.1 4004887 4005420 R KEGG: mmc:Mmcs_3376 hypothetical protein; hypothetical protein complement(4004887..4005420) Mycobacterium vanbaalenii PYR-1 4645126 YP_954552.1 CDS Mvan_3764 NC_008726.1 4005533 4006357 R PFAM: beta-lactamase; KEGG: mmc:Mmcs_3377 beta-lactamase; beta-lactamase complement(4005533..4006357) Mycobacterium vanbaalenii PYR-1 4645127 YP_954553.1 CDS Mvan_3765 NC_008726.1 4006392 4007522 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_3378 methyltransferase type 11; type 12 methyltransferase complement(4006392..4007522) Mycobacterium vanbaalenii PYR-1 4645128 YP_954554.1 CDS Mvan_3766 NC_008726.1 4007562 4009181 R PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_2 repeat protein; KEGG: mmc:Mmcs_3379 transcriptional regulator, LuxR family; response regulator receiver protein complement(4007562..4009181) Mycobacterium vanbaalenii PYR-1 4645129 YP_954555.1 CDS Mvan_3767 NC_008726.1 4009329 4010414 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3380 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 4009329..4010414 Mycobacterium vanbaalenii PYR-1 4645130 YP_954556.1 CDS Mvan_3768 NC_008726.1 4010411 4011040 D PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_3381 beta-lactamase-like protein; beta-lactamase domain-containing protein 4010411..4011040 Mycobacterium vanbaalenii PYR-1 4645131 YP_954557.1 CDS Mvan_3769 NC_008726.1 4011056 4011793 R hypothetical protein complement(4011056..4011793) Mycobacterium vanbaalenii PYR-1 4645132 YP_954558.1 CDS Mvan_3770 NC_008726.1 4011860 4012945 D KEGG: mmc:Mmcs_3382 hypothetical protein; hypothetical protein 4011860..4012945 Mycobacterium vanbaalenii PYR-1 4645133 YP_954559.1 CDS Mvan_3771 NC_008726.1 4012942 4014045 R PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2013c hypothetical protein; dihydrodipicolinate reductase complement(4012942..4014045) Mycobacterium vanbaalenii PYR-1 4645134 YP_954560.1 CDS Mvan_3772 NC_008726.1 4014023 4014541 R KEGG: mmc:Mmcs_3390 hypothetical protein; hypothetical protein complement(4014023..4014541) Mycobacterium vanbaalenii PYR-1 4645135 YP_954561.1 CDS Mvan_3773 NC_008726.1 4014686 4016218 D PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_3391 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4014686..4016218 Mycobacterium vanbaalenii PYR-1 4645136 YP_954562.1 CDS Mvan_3774 NC_008726.1 4016221 4017183 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3392 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4016221..4017183 Mycobacterium vanbaalenii PYR-1 4645137 YP_954563.1 CDS Mvan_3775 NC_008726.1 4017180 4018064 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3393 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4017180..4018064 Mycobacterium vanbaalenii PYR-1 4645138 YP_954564.1 CDS Mvan_3776 NC_008726.1 4018061 4019668 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_3394 ABC transporter related; ABC transporter--like protein 4018061..4019668 Mycobacterium vanbaalenii PYR-1 4645139 YP_954565.1 CDS Mvan_3777 NC_008726.1 4019700 4020440 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3395 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4019700..4020440 Mycobacterium vanbaalenii PYR-1 4645140 YP_954566.1 CDS Mvan_3778 NC_008726.1 4020476 4021897 R PFAM: protein of unknown function DUF222; KEGG: mbo:Mb0528 conserved 13E12 repeat family protein; hypothetical protein complement(4020476..4021897) Mycobacterium vanbaalenii PYR-1 4645141 YP_954567.1 CDS Mvan_3779 NC_008726.1 4021932 4022936 R KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein complement(4021932..4022936) Mycobacterium vanbaalenii PYR-1 4645142 YP_954568.1 CDS Mvan_3780 NC_008726.1 4023142 4023678 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP0008c hypothetical protein; TetR family transcriptional regulator complement(4023142..4023678) Mycobacterium vanbaalenii PYR-1 4645143 YP_954569.1 CDS Mvan_3781 NC_008726.1 4023864 4025084 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_3422 cytochrome P450; cytochrome P450 4023864..4025084 Mycobacterium vanbaalenii PYR-1 4645144 YP_954570.1 CDS Mvan_3782 NC_008726.1 4025226 4026233 D KEGG: mmc:Mmcs_3421 hypothetical protein; hypothetical protein 4025226..4026233 Mycobacterium vanbaalenii PYR-1 4645470 YP_954571.1 CDS Mvan_3783 NC_008726.1 4026243 4027316 R PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2881c hypothetical protein; dihydrodipicolinate reductase complement(4026243..4027316) Mycobacterium vanbaalenii PYR-1 4645471 YP_954572.1 CDS Mvan_3784 NC_008726.1 4027333 4028361 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP2882c hypothetical protein; Rieske (2Fe-2S) domain-containing protein complement(4027333..4028361) Mycobacterium vanbaalenii PYR-1 4645472 YP_954573.1 CDS Mvan_3785 NC_008726.1 4028432 4029055 D KEGG: mpa:MAP2883 hypothetical protein; hypothetical protein 4028432..4029055 Mycobacterium vanbaalenii PYR-1 4645473 YP_954574.1 CDS Mvan_3786 NC_008726.1 4029057 4029383 R PFAM: branched-chain amino acid transport; KEGG: cjk:jk2085 branched-chain amino acid transport protein; branched-chain amino acid transport complement(4029057..4029383) Mycobacterium vanbaalenii PYR-1 4645474 YP_954575.1 CDS Mvan_3787 NC_008726.1 4029376 4030077 R PFAM: AzlC family protein; KEGG: cef:CE2926 hypothetical protein; AzlC family protein complement(4029376..4030077) Mycobacterium vanbaalenii PYR-1 4645475 YP_954576.1 CDS Mvan_3788 NC_008726.1 4030122 4031114 D PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2049 hypothetical protein; alpha/beta hydrolase fold protein 4030122..4031114 Mycobacterium vanbaalenii PYR-1 4645476 YP_954577.1 CDS Mvan_3789 NC_008726.1 4031094 4033826 R PFAM: peptidase M4, thermolysin; Propeptide, peptidase M4 and M36; Peptidase M4, thermolysin; KEGG: gka:GK2838 putative neutral protease; peptidase M4, thermolysin complement(4031094..4033826) Mycobacterium vanbaalenii PYR-1 4645477 YP_954578.1 CDS Mvan_3791 NC_008726.1 4036247 4037869 D KEGG: mmc:Mmcs_2209 hypothetical protein; hypothetical protein 4036247..4037869 Mycobacterium vanbaalenii PYR-1 4645479 YP_954579.1 CDS Mvan_3792 NC_008726.1 4037873 4039321 R TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; KEGG: nfa:nfa48510 putative oligopeptide transporter; amino acid/peptide transporter complement(4037873..4039321) Mycobacterium vanbaalenii PYR-1 4645480 YP_954580.1 CDS Mvan_3793 NC_008726.1 4039394 4039885 D PFAM: protein of unknown function DUF427; KEGG: mmc:Mmcs_2990 protein of unknown function DUF427; hypothetical protein 4039394..4039885 Mycobacterium vanbaalenii PYR-1 4645481 YP_954581.1 CDS Mvan_3794 NC_008726.1 4039992 4041170 D KEGG: mmc:Mmcs_3421 hypothetical protein; hypothetical protein 4039992..4041170 Mycobacterium vanbaalenii PYR-1 4645482 YP_954582.1 CDS Mvan_3795 NC_008726.1 4041174 4042115 R PFAM: MscS Mechanosensitive ion channel; KEGG: mmc:Mmcs_0847 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(4041174..4042115) Mycobacterium vanbaalenii PYR-1 4645483 YP_954583.1 CDS Mvan_3796 NC_008726.1 4042174 4042485 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP2077c hypothetical protein; anti-sigma-factor antagonist complement(4042174..4042485) Mycobacterium vanbaalenii PYR-1 4645484 YP_954584.1 CDS Mvan_3797 NC_008726.1 4042485 4044971 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein; putative GAF sensor protein complement(4042485..4044971) Mycobacterium vanbaalenii PYR-1 4645485 YP_954585.1 CDS Mvan_3798 NC_008726.1 4045286 4045582 D KEGG: mmc:Mmcs_3424 hypothetical protein; hypothetical protein 4045286..4045582 Mycobacterium vanbaalenii PYR-1 4645486 YP_954586.1 CDS Mvan_3799 NC_008726.1 4046430 4047164 D KEGG: mag:amb2001 type V secretory pathway, adhesin AidA; hypothetical protein 4046430..4047164 Mycobacterium vanbaalenii PYR-1 4645487 YP_954587.1 CDS Mvan_3800 NC_008726.1 4047927 4048580 D hypothetical protein 4047927..4048580 Mycobacterium vanbaalenii PYR-1 4645488 YP_954588.1 CDS Mvan_3801 NC_008726.1 4048570 4049349 D KEGG: pto:PTO0034 hypothetical protein; hypothetical protein 4048570..4049349 Mycobacterium vanbaalenii PYR-1 4645489 YP_954589.1 CDS Mvan_3802 NC_008726.1 4049465 4050307 R KEGG: mmc:Mmcs_3427 hypothetical protein; hypothetical protein complement(4049465..4050307) Mycobacterium vanbaalenii PYR-1 4645491 YP_954590.1 CDS Mvan_3803 NC_008726.1 4050315 4051688 R KEGG: mmc:Mmcs_3428 hypothetical protein; hypothetical protein complement(4050315..4051688) Mycobacterium vanbaalenii PYR-1 4645492 YP_954591.1 CDS Mvan_3804 NC_008726.1 4051692 4053206 R PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mmc:Mmcs_3429 peptidase U62, modulator of DNA gyrase; C69 family peptidase complement(4051692..4053206) Mycobacterium vanbaalenii PYR-1 4645493 YP_954592.1 CDS Mvan_3805 NC_008726.1 4053226 4054074 R PFAM: cobalt transport protein; KEGG: mmc:Mmcs_3430 cobalt transport protein; cobalt transport protein complement(4053226..4054074) Mycobacterium vanbaalenii PYR-1 4645944 YP_954593.1 CDS Mvan_3806 NC_008726.1 4054071 4056116 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3431 ABC transporter related; ABC transporter--like protein complement(4054071..4056116) Mycobacterium vanbaalenii PYR-1 4645945 YP_954594.1 CDS Mvan_3807 NC_008726.1 4056222 4056653 D PFAM: regulatory protein, MarR; KEGG: mbo:Mb2354 hypothetical protein; MarR family transcriptional regulator 4056222..4056653 Mycobacterium vanbaalenii PYR-1 4645946 YP_954595.1 CDS Mvan_3808 NC_008726.1 4056826 4058835 D PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3435 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4056826..4058835 Mycobacterium vanbaalenii PYR-1 4645947 YP_954596.1 CDS Mvan_3809 NC_008726.1 4058840 4059307 R KEGG: mmc:Mmcs_3436 LppP; LppP complement(4058840..4059307) Mycobacterium vanbaalenii PYR-1 4645948 YP_954597.1 CDS Mvan_3810 NC_008726.1 4059380 4062199 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: pol:Bpro_1191 ATPase, E1-E2 type; P-type HAD superfamily ATPase complement(4059380..4062199) Mycobacterium vanbaalenii PYR-1 4645949 YP_954598.1 CDS Mvan_3811 NC_008726.1 4062347 4062589 R hypothetical protein complement(4062347..4062589) Mycobacterium vanbaalenii PYR-1 4645950 YP_954599.1 CDS Mvan_3812 NC_008726.1 4062980 4063279 D KEGG: mmc:Mmcs_3440 hypothetical protein; hypothetical protein 4062980..4063279 Mycobacterium vanbaalenii PYR-1 4645952 YP_954600.1 CDS Mvan_3813 NC_008726.1 4063276 4063617 R KEGG: mmc:Mmcs_3441 hypothetical protein; hypothetical protein complement(4063276..4063617) Mycobacterium vanbaalenii PYR-1 4645953 YP_954601.1 CDS dnaG NC_008726.1 4063640 4065589 R synthesizes RNA primers at the replication forks; DNA primase complement(4063640..4065589) Mycobacterium vanbaalenii PYR-1 4645954 YP_954602.1 CDS Mvan_3815 NC_008726.1 4065594 4066868 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(4065594..4066868) Mycobacterium vanbaalenii PYR-1 4645955 YP_954603.1 CDS Mvan_3816 NC_008726.1 4066933 4068921 D PFAM: protein of unknown function DUF477; KEGG: mmc:Mmcs_3444 protein of unknown function DUF477; hypothetical protein 4066933..4068921 Mycobacterium vanbaalenii PYR-1 4645956 YP_954604.1 CDS Mvan_3817 NC_008726.1 4069122 4070006 D KEGG: mmc:Mmcs_1169 hypothetical protein; hypothetical protein 4069122..4070006 Mycobacterium vanbaalenii PYR-1 4645957 YP_954605.1 CDS Mvan_3818 NC_008726.1 4070157 4071563 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(4070157..4071563) Mycobacterium vanbaalenii PYR-1 4645958 YP_954606.1 CDS Mvan_3819 NC_008726.1 4071649 4072011 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_3446 transcriptional regulator, ArsR family; regulatory protein ArsR 4071649..4072011 Mycobacterium vanbaalenii PYR-1 4645959 YP_954607.1 CDS Mvan_3820 NC_008726.1 4072008 4072403 D PFAM: ferric-uptake regulator; KEGG: mbo:Mb2380 probable ferric uptake regulation protein FurB; ferric uptake regulator family protein 4072008..4072403 Mycobacterium vanbaalenii PYR-1 4645960 YP_954608.1 CDS Mvan_3821 NC_008726.1 4072612 4073019 R KEGG: mmc:Mmcs_3448 hypothetical protein; hypothetical protein complement(4072612..4073019) Mycobacterium vanbaalenii PYR-1 4645961 YP_954609.1 CDS Mvan_3822 NC_008726.1 4073094 4073789 R KEGG: mmc:Mmcs_3449 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(4073094..4073789) Mycobacterium vanbaalenii PYR-1 4645962 YP_954610.1 CDS recO NC_008726.1 4073926 4074780 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(4073926..4074780) Mycobacterium vanbaalenii PYR-1 4645963 YP_954611.1 CDS Mvan_3824 NC_008726.1 4074822 4076339 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 4074822..4076339 Mycobacterium vanbaalenii PYR-1 4645964 YP_954612.1 CDS Mvan_3825 NC_008726.1 4076350 4076835 D KEGG: mtc:MT2026 hypothetical protein; hypothetical protein 4076350..4076835 Mycobacterium vanbaalenii PYR-1 4645965 YP_954613.1 CDS Mvan_3826 NC_008726.1 4077106 4078266 R hypothetical protein complement(4077106..4078266) Mycobacterium vanbaalenii PYR-1 4645966 YP_954614.1 CDS Mvan_3827 NC_008726.1 4078549 4079949 D KEGG: pol:Bpro_4974 hypothetical protein; hypothetical protein 4078549..4079949 Mycobacterium vanbaalenii PYR-1 4645967 YP_954615.1 CDS era NC_008726.1 4079975 4080892 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(4079975..4080892) Mycobacterium vanbaalenii PYR-1 4645968 YP_954616.1 CDS Mvan_3829 NC_008726.1 4080889 4081206 R KEGG: mbo:Mb2386c hypothetical protein; hypothetical protein complement(4080889..4081206) Mycobacterium vanbaalenii PYR-1 4649248 YP_954617.1 CDS Mvan_3830 NC_008726.1 4081203 4082501 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_3454 protein of unknown function DUF21; CBS domain-containing protein complement(4081203..4082501) Mycobacterium vanbaalenii PYR-1 4649249 YP_954618.1 CDS Mvan_3831 NC_008726.1 4082498 4083052 R PFAM: protein of unknown function UPF0054; KEGG: mmc:Mmcs_3455 protein of unknown function UPF0054; putative metalloprotease complement(4082498..4083052) Mycobacterium vanbaalenii PYR-1 4649250 YP_954619.1 CDS Mvan_3832 NC_008726.1 4083061 4084116 R PFAM: PhoH family protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: mpa:MAP2160c PhoH-related protein; PhoH family protein complement(4083061..4084116) Mycobacterium vanbaalenii PYR-1 4649251 YP_954620.1 CDS Mvan_3833 NC_008726.1 4084194 4087028 R TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mtu:Rv0450c conserved large membrane protein; transport protein complement(4084194..4087028) Mycobacterium vanbaalenii PYR-1 4649252 YP_954621.1 CDS Mvan_3834 NC_008726.1 4087025 4087444 R PFAM: Mycobacterium membrane family protein; KEGG: mbo:Mb0459c probable conserved membrane protein MmpS4; hypothetical protein complement(4087025..4087444) Mycobacterium vanbaalenii PYR-1 4649253 YP_954622.1 CDS Mvan_3835 NC_008726.1 4087554 4088294 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(4087554..4088294) Mycobacterium vanbaalenii PYR-1 4649254 YP_954623.1 CDS Mvan_3836 NC_008726.1 4088313 4089464 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(4088313..4089464) Mycobacterium vanbaalenii PYR-1 4649255 YP_954624.1 CDS hrcA NC_008726.1 4089516 4090547 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(4089516..4090547) Mycobacterium vanbaalenii PYR-1 4649256 YP_954625.1 CDS Mvan_3838 NC_008726.1 4090716 4091030 D KEGG: mbo:Mb2396 hypothetical protein; hypothetical protein 4090716..4091030 Mycobacterium vanbaalenii PYR-1 4649257 YP_954626.1 CDS Mvan_3839 NC_008726.1 4091097 4091741 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO5862 two-component regulator CutR; two component transcriptional regulator 4091097..4091741 Mycobacterium vanbaalenii PYR-1 4649258 YP_954627.1 CDS Mvan_3840 NC_008726.1 4091738 4092925 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: tfu:Tfu_1940 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; integral membrane sensor signal transduction histidine kinase 4091738..4092925 Mycobacterium vanbaalenii PYR-1 4649259 YP_954628.1 CDS Mvan_3841 NC_008726.1 4092919 4093308 R KEGG: nfa:nfa6650 hypothetical protein; hypothetical protein complement(4092919..4093308) Mycobacterium vanbaalenii PYR-1 4649260 YP_954629.1 CDS Mvan_3842 NC_008726.1 4093391 4093621 R PFAM: MbtH domain protein; KEGG: mmc:Mmcs_3463 MbtH-like protein; MbtH domain-containing protein complement(4093391..4093621) Mycobacterium vanbaalenii PYR-1 4649261 YP_954630.1 CDS Mvan_3843 NC_008726.1 4093599 4094906 R KEGG: mmc:Mmcs_3464 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4093599..4094906) Mycobacterium vanbaalenii PYR-1 4649262 YP_954631.1 CDS Mvan_3844 NC_008726.1 4094903 4099384 R TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_3465 amino acid adenylation; amino acid adenylation domain-containing protein complement(4094903..4099384) Mycobacterium vanbaalenii PYR-1 4649263 YP_954632.1 CDS Mvan_3845 NC_008726.1 4099381 4104546 R TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_3466 amino acid adenylation; amino acid adenylation domain-containing protein complement(4099381..4104546) Mycobacterium vanbaalenii PYR-1 4649264 YP_954633.1 CDS Mvan_3846 NC_008726.1 4104539 4107457 R PFAM: acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_3467 acyl transferase region; acyl transferase domain-containing protein complement(4104539..4107457) Mycobacterium vanbaalenii PYR-1 4649265 YP_954634.1 CDS Mvan_3847 NC_008726.1 4107457 4108773 R PFAM: beta-ketoacyl synthase; KEGG: mmc:Mmcs_3468 beta-ketoacyl synthase; beta-ketoacyl synthase complement(4107457..4108773) Mycobacterium vanbaalenii PYR-1 4649266 YP_954635.1 CDS Mvan_3848 NC_008726.1 4108770 4109513 R PFAM: Thioesterase; KEGG: mmc:Mmcs_3469 thioesterase; thioesterase complement(4108770..4109513) Mycobacterium vanbaalenii PYR-1 4649267 YP_954636.1 CDS Mvan_3849 NC_008726.1 4109510 4112959 R TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: mmc:Mmcs_3470 amino acid adenylation; amino acid adenylation domain-containing protein complement(4109510..4112959) Mycobacterium vanbaalenii PYR-1 4649268 YP_954637.1 CDS Mvan_3850 NC_008726.1 4113062 4114714 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3471 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4113062..4114714 Mycobacterium vanbaalenii PYR-1 4649269 YP_954638.1 CDS Mvan_3851 NC_008726.1 4114752 4116293 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein 4114752..4116293 Mycobacterium vanbaalenii PYR-1 4649270 YP_954639.1 CDS Mvan_3852 NC_008726.1 4116304 4121538 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_3472 beta-ketoacyl synthase; beta-ketoacyl synthase complement(4116304..4121538) Mycobacterium vanbaalenii PYR-1 4649271 YP_954640.1 CDS Mvan_3853 NC_008726.1 4121535 4121918 R hypothetical protein complement(4121535..4121918) Mycobacterium vanbaalenii PYR-1 4649272 YP_954641.1 CDS Mvan_3854 NC_008726.1 4121967 4122827 D KEGG: mpa:MAP0792c hypothetical protein; hypothetical protein 4121967..4122827 Mycobacterium vanbaalenii PYR-1 4649171 YP_954642.1 CDS Mvan_3855 NC_008726.1 4122828 4124012 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(4122828..4124012) Mycobacterium vanbaalenii PYR-1 4649172 YP_954643.1 CDS Mvan_3856 NC_008726.1 4124051 4125706 D KEGG: mtc:MT2220 PE_PGRS family protein; hypothetical protein 4124051..4125706 Mycobacterium vanbaalenii PYR-1 4649173 YP_954644.1 CDS Mvan_3857 NC_008726.1 4126049 4127731 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mmc:Mmcs_3474 ferredoxin--nitrite reductase; ferredoxin--nitrite reductase 4126049..4127731 Mycobacterium vanbaalenii PYR-1 4649174 YP_954645.1 CDS Mvan_3858 NC_008726.1 4127737 4128435 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 4127737..4128435 Mycobacterium vanbaalenii PYR-1 4649175 YP_954646.1 CDS Mvan_3859 NC_008726.1 4128443 4129147 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mmc:Mmcs_3476 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 4128443..4129147 Mycobacterium vanbaalenii PYR-1 4649176 YP_954647.1 CDS Mvan_3860 NC_008726.1 4129240 4130601 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_3477 protein of unknown function DUF21; hypothetical protein 4129240..4130601 Mycobacterium vanbaalenii PYR-1 4649177 YP_954648.1 CDS Mvan_3861 NC_008726.1 4130594 4131592 D PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: mmc:Mmcs_3478 protein of unknown function DUF21; hypothetical protein 4130594..4131592 Mycobacterium vanbaalenii PYR-1 4649178 YP_954649.1 CDS Mvan_3862 NC_008726.1 4131706 4132191 D KEGG: sma:SAV6519 hypothetical protein; hypothetical protein 4131706..4132191 Mycobacterium vanbaalenii PYR-1 4649179 YP_954650.1 CDS Mvan_3863 NC_008726.1 4132181 4132738 D KEGG: sma:SAV6518 hypothetical protein; hypothetical protein 4132181..4132738 Mycobacterium vanbaalenii PYR-1 4649180 YP_954651.1 CDS Mvan_3864 NC_008726.1 4132754 4133179 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: sma:SAV6517 iron sulphur protein; Rieske (2Fe-2S) domain-containing protein 4132754..4133179 Mycobacterium vanbaalenii PYR-1 4649181 YP_954652.1 CDS Mvan_3865 NC_008726.1 4133210 4134211 R KEGG: mbo:Mb2186c conserved hypothetical protein, PE_PGRS; hypothetical protein complement(4133210..4134211) Mycobacterium vanbaalenii PYR-1 4649182 YP_954653.1 CDS Mvan_3866 NC_008726.1 4134222 4134551 D hypothetical protein 4134222..4134551 Mycobacterium vanbaalenii PYR-1 4649183 YP_954654.1 CDS Mvan_3867 NC_008726.1 4134747 4136459 R KEGG: mbo:Mb1121 PE-PGRS family protein; PE-PGRS family protein complement(4134747..4136459) Mycobacterium vanbaalenii PYR-1 4649184 YP_954655.1 CDS Mvan_3868 NC_008726.1 4136643 4138226 R PFAM: Glycosyltransferase 28, C-terminal domain; KEGG: dde:Dde_0735 hypothetical protein; glycosyltransferase family 28 protein complement(4136643..4138226) Mycobacterium vanbaalenii PYR-1 4649185 YP_954656.1 CDS Mvan_3869 NC_008726.1 4138223 4138789 R KEGG: bja:bll0839 hypothetical protein; alpha/beta fold family hydrolase/acetyltransferase complement(4138223..4138789) Mycobacterium vanbaalenii PYR-1 4649186 YP_954657.1 CDS Mvan_3870 NC_008726.1 4138807 4139880 R PFAM: O-methyltransferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2993 methyltransferase type 12; type 12 methyltransferase complement(4138807..4139880) Mycobacterium vanbaalenii PYR-1 4649187 YP_954658.1 CDS Mvan_3871 NC_008726.1 4139984 4142725 D PFAM: regulatory protein, LuxR; Bacterio-opsin activator, HTH domain protein; KEGG: sco:SCO0877 transcriptional regulatory protein; regulatory protein LuxR 4139984..4142725 Mycobacterium vanbaalenii PYR-1 4649188 YP_954659.1 CDS Mvan_3872 NC_008726.1 4142727 4143749 R KEGG: mmc:Mmcs_3479 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; sulfate ABC transporter ATPase complement(4142727..4143749) Mycobacterium vanbaalenii PYR-1 4649189 YP_954660.1 CDS Mvan_3873 NC_008726.1 4143771 4144583 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3480 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter permease complement(4143771..4144583) Mycobacterium vanbaalenii PYR-1 4649190 YP_954661.1 CDS Mvan_3874 NC_008726.1 4144580 4145455 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3481 sulfate ABC transporter, permease protein CysT; sulfate ABC transporter permease complement(4144580..4145455) Mycobacterium vanbaalenii PYR-1 4649191 YP_954662.1 CDS Mvan_3875 NC_008726.1 4145470 4146495 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_3482 thiosulphate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein complement(4145470..4146495) Mycobacterium vanbaalenii PYR-1 4649192 YP_954663.1 CDS Mvan_3876 NC_008726.1 4146836 4147042 R KEGG: mpa:MAP2214c hypothetical protein; hypothetical protein complement(4146836..4147042) Mycobacterium vanbaalenii PYR-1 4649193 YP_954664.1 CDS Mvan_3877 NC_008726.1 4147128 4149134 D PFAM: glycoside hydrolase 15-related; KEGG: mmc:Mmcs_3484 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 4147128..4149134 Mycobacterium vanbaalenii PYR-1 4649194 YP_954665.1 CDS Mvan_3878 NC_008726.1 4149160 4149885 R KEGG: mmc:Mmcs_3491 hypothetical protein; hypothetical protein complement(4149160..4149885) Mycobacterium vanbaalenii PYR-1 4649195 YP_954666.1 CDS Mvan_3879 NC_008726.1 4149911 4150654 R KEGG: mmc:Mmcs_3492 LppR; LppR complement(4149911..4150654) Mycobacterium vanbaalenii PYR-1 4649196 YP_954667.1 CDS Mvan_3880 NC_008726.1 4150750 4151436 R KEGG: mmc:Mmcs_3491 hypothetical protein; hypothetical protein complement(4150750..4151436) Mycobacterium vanbaalenii PYR-1 4647349 YP_954668.1 CDS Mvan_3881 NC_008726.1 4151457 4153415 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(4151457..4153415) Mycobacterium vanbaalenii PYR-1 4647350 YP_954669.1 CDS Mvan_3882 NC_008726.1 4153425 4154045 D KEGG: mmc:Mmcs_3494 hypothetical protein; hypothetical protein 4153425..4154045 Mycobacterium vanbaalenii PYR-1 4647351 YP_954670.1 CDS Mvan_3884 NC_008726.1 4155556 4156611 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3500 ABC transporter related; ABC transporter--like protein 4155556..4156611 Mycobacterium vanbaalenii PYR-1 4647353 YP_954671.1 CDS Mvan_3885 NC_008726.1 4156608 4157291 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3501 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4156608..4157291 Mycobacterium vanbaalenii PYR-1 4647354 YP_954672.1 CDS Mvan_3886 NC_008726.1 4157327 4158247 D PFAM: NLPA lipoprotein; KEGG: mmc:Mmcs_3503 NlpA lipoprotein; NLPA lipoprotein 4157327..4158247 Mycobacterium vanbaalenii PYR-1 4647355 YP_954673.1 CDS Mvan_3887 NC_008726.1 4158244 4159650 D KEGG: mmc:Mmcs_3504 putative monooxygenase; putative monooxygenase 4158244..4159650 Mycobacterium vanbaalenii PYR-1 4647356 YP_954674.1 CDS Mvan_3889 NC_008726.1 4160001 4160336 D PFAM: Excalibur domain protein; excalibur domain-containing protein 4160001..4160336 Mycobacterium vanbaalenii PYR-1 4647358 YP_954675.1 CDS Mvan_3890 NC_008726.1 4160366 4160830 D KEGG: mmc:Mmcs_1037 hypothetical protein; hypothetical protein 4160366..4160830 Mycobacterium vanbaalenii PYR-1 4647359 YP_954676.1 CDS Mvan_3891 NC_008726.1 4160827 4161309 D hypothetical protein 4160827..4161309 Mycobacterium vanbaalenii PYR-1 4647360 YP_954677.1 CDS Mvan_3892 NC_008726.1 4161306 4161626 D hypothetical protein 4161306..4161626 Mycobacterium vanbaalenii PYR-1 4647361 YP_954678.1 CDS Mvan_3893 NC_008726.1 4161637 4161972 D KEGG: mmc:Mmcs_1984 hypothetical protein; hypothetical protein 4161637..4161972 Mycobacterium vanbaalenii PYR-1 4647362 YP_954679.1 CDS Mvan_3894 NC_008726.1 4162852 4164348 D PFAM: Integrase, catalytic region; KEGG: rme:Rmet_1264 integrase, catalytic region; integrase catalytic subunit 4162852..4164348 Mycobacterium vanbaalenii PYR-1 4647363 YP_954680.1 CDS Mvan_3895 NC_008726.1 4164345 4164737 D KEGG: sth:STH2698 IS21 family transposase; hypothetical protein 4164345..4164737 Mycobacterium vanbaalenii PYR-1 4647364 YP_954681.1 CDS Mvan_3896 NC_008726.1 4164843 4166024 D PFAM: phage integrase family protein; KEGG: fra:Francci3_3734 phage integrase-like SAM-like; phage integrase family protein 4164843..4166024 Mycobacterium vanbaalenii PYR-1 4647365 YP_954682.1 CDS Mvan_3897 NC_008726.1 4166021 4168195 D PFAM: phage integrase family protein; KEGG: mmc:Mmcs_5578 phage integrase; phage integrase family protein 4166021..4168195 Mycobacterium vanbaalenii PYR-1 4647366 YP_954683.1 CDS Mvan_3898 NC_008726.1 4168192 4168635 D KEGG: Tn554-related, transposase C; Tn554-related, transposase C 4168192..4168635 Mycobacterium vanbaalenii PYR-1 4647367 YP_954684.1 CDS Mvan_3900 NC_008726.1 4169654 4170871 D PFAM: Integrase, catalytic region; KEGG: sma:SAV7547 IS21 family transposase; integrase catalytic subunit 4169654..4170871 Mycobacterium vanbaalenii PYR-1 4647369 YP_954685.1 CDS Mvan_3901 NC_008726.1 4170871 4171212 D hypothetical protein 4170871..4171212 Mycobacterium vanbaalenii PYR-1 4647370 YP_954686.1 CDS Mvan_3902 NC_008726.1 4171272 4171715 R KEGG: Tn554-related, transposase C; Tn554-related, transposase C complement(4171272..4171715) Mycobacterium vanbaalenii PYR-1 4647371 YP_954687.1 CDS Mvan_3903 NC_008726.1 4171712 4173886 R PFAM: phage integrase family protein; KEGG: mmc:Mmcs_5578 phage integrase; phage integrase family protein complement(4171712..4173886) Mycobacterium vanbaalenii PYR-1 4647372 YP_954688.1 CDS Mvan_3904 NC_008726.1 4173883 4175064 R PFAM: phage integrase family protein; KEGG: fra:Francci3_3734 phage integrase-like SAM-like; phage integrase family protein complement(4173883..4175064) Mycobacterium vanbaalenii PYR-1 4647373 YP_954689.1 CDS Mvan_3906 NC_008726.1 4176646 4177254 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_3497 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4176646..4177254) Mycobacterium vanbaalenii PYR-1 4645146 YP_954690.1 CDS Mvan_3907 NC_008726.1 4177260 4177688 R PFAM: CBS domain containing protein; KEGG: mmc:Mmcs_3505 putative signal-transduction protein with CBS domains; signal-transduction protein complement(4177260..4177688) Mycobacterium vanbaalenii PYR-1 4645147 YP_954691.1 CDS Mvan_3908 NC_008726.1 4177845 4178747 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 4177845..4178747 Mycobacterium vanbaalenii PYR-1 4645148 YP_954692.1 CDS Mvan_3909 NC_008726.1 4178731 4179570 R PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mmc:Mmcs_3507 transglutaminase-like protein; transglutaminase domain-containing protein complement(4178731..4179570) Mycobacterium vanbaalenii PYR-1 4645149 YP_954693.1 CDS Mvan_3910 NC_008726.1 4179570 4180544 R PFAM: protein of unknown function DUF403; KEGG: mmc:Mmcs_3508 protein of unknown function DUF403; hypothetical protein complement(4179570..4180544) Mycobacterium vanbaalenii PYR-1 4645150 YP_954694.1 CDS Mvan_3911 NC_008726.1 4180556 4182115 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mmc:Mmcs_3509 protein of unknown function DUF404; hypothetical protein complement(4180556..4182115) Mycobacterium vanbaalenii PYR-1 4645151 YP_954695.1 CDS rpsT NC_008726.1 4182375 4182635 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4182375..4182635 Mycobacterium vanbaalenii PYR-1 4645152 YP_954696.1 CDS Mvan_3913 NC_008726.1 4182730 4183680 R PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit; hypothetical protein complement(4182730..4183680) Mycobacterium vanbaalenii PYR-1 4645153 YP_954697.1 CDS Mvan_3914 NC_008726.1 4183686 4185152 R PFAM: ComEC/Rec2-related protein; KEGG: mtc:MT2487 hypothetical protein; ComEC/Rec2--like protein complement(4183686..4185152) Mycobacterium vanbaalenii PYR-1 4645154 YP_954698.1 CDS Mvan_3915 NC_008726.1 4185156 4185965 R KEGG: mmc:Mmcs_3520 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix repeat-containing competence protein ComEA complement(4185156..4185965) Mycobacterium vanbaalenii PYR-1 4645155 YP_954699.1 CDS Mvan_3916 NC_008726.1 4186079 4186735 D hypothetical protein 4186079..4186735 Mycobacterium vanbaalenii PYR-1 4645156 YP_954700.1 CDS Mvan_3917 NC_008726.1 4186735 4187880 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro06683 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4186735..4187880 Mycobacterium vanbaalenii PYR-1 4645157 YP_954701.1 CDS Mvan_3918 NC_008726.1 4187877 4188869 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0212 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4187877..4188869 Mycobacterium vanbaalenii PYR-1 4645158 YP_954702.1 CDS Mvan_3919 NC_008726.1 4188874 4189680 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0298 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4188874..4189680) Mycobacterium vanbaalenii PYR-1 4645159 YP_954703.1 CDS Mvan_3920 NC_008726.1 4189712 4190767 D PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_3522 dihydrodipicolinate reductase; dihydrodipicolinate reductase 4189712..4190767 Mycobacterium vanbaalenii PYR-1 4645160 YP_954704.1 CDS Mvan_3921 NC_008726.1 4191040 4192302 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_0130 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4191040..4192302 Mycobacterium vanbaalenii PYR-1 4645161 YP_954705.1 CDS Mvan_3922 NC_008726.1 4192439 4193272 R TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: mmc:Mmcs_3526 DegV family protein; degV family protein complement(4192439..4193272) Mycobacterium vanbaalenii PYR-1 4645162 YP_954706.1 CDS Mvan_3923 NC_008726.1 4193282 4194031 R KEGG: mmc:Mmcs_3527 hypothetical protein; hypothetical protein complement(4193282..4194031) Mycobacterium vanbaalenii PYR-1 4645163 YP_954707.1 CDS Mvan_3924 NC_008726.1 4194021 4194698 R PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3528 phosphoglycerate mutase; phosphoglycerate mutase complement(4194021..4194698) Mycobacterium vanbaalenii PYR-1 4645164 YP_954708.1 CDS Mvan_3925 NC_008726.1 4194695 4195060 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mmc:Mmcs_3529 iojap-related protein; iojap family protein complement(4194695..4195060) Mycobacterium vanbaalenii PYR-1 4645165 YP_954709.1 CDS nadD NC_008726.1 4195084 4195728 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(4195084..4195728) Mycobacterium vanbaalenii PYR-1 4645166 YP_954710.1 CDS Mvan_3927 NC_008726.1 4195756 4196484 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_3531 transcriptional regulator, GntR family; UbiC transcription regulator-associated domain-containing protein complement(4195756..4196484) Mycobacterium vanbaalenii PYR-1 4645167 YP_954711.1 CDS Mvan_3928 NC_008726.1 4196629 4198107 D PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_3532 amino acid permease-associated region; amino acid permease-associated protein 4196629..4198107 Mycobacterium vanbaalenii PYR-1 4645168 YP_954712.1 CDS Mvan_3929 NC_008726.1 4198119 4199567 D PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_3533 carbohydrate kinase, FGGY; carbohydrate kinase 4198119..4199567 Mycobacterium vanbaalenii PYR-1 4645169 YP_954713.1 CDS Mvan_3930 NC_008726.1 4199564 4200949 D PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3534 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4199564..4200949 Mycobacterium vanbaalenii PYR-1 4646221 YP_954714.1 CDS Mvan_3931 NC_008726.1 4200946 4202190 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3535 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4200946..4202190 Mycobacterium vanbaalenii PYR-1 4646222 YP_954715.1 CDS Mvan_3932 NC_008726.1 4202265 4203701 R PFAM: VWA containing CoxE family protein; KEGG: mmc:Mmcs_3536 VWA containing CoxE-like protein; VWA containing CoxE family protein complement(4202265..4203701) Mycobacterium vanbaalenii PYR-1 4646223 YP_954716.1 CDS Mvan_3933 NC_008726.1 4203701 4204585 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mmc:Mmcs_3537 ATPase associated with various cellular activities, AAA_5; ATPase complement(4203701..4204585) Mycobacterium vanbaalenii PYR-1 4646224 YP_954717.1 CDS proA NC_008726.1 4204604 4205851 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(4204604..4205851) Mycobacterium vanbaalenii PYR-1 4646225 YP_954718.1 CDS Mvan_3935 NC_008726.1 4205936 4206796 D PFAM: PfkB domain protein; KEGG: mmc:Mmcs_3539 PfkB; ribokinase 4205936..4206796 Mycobacterium vanbaalenii PYR-1 4646226 YP_954719.1 CDS Mvan_3936 NC_008726.1 4206819 4207634 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3540 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4206819..4207634 Mycobacterium vanbaalenii PYR-1 4646227 YP_954720.1 CDS Mvan_3937 NC_008726.1 4207682 4208011 D PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: nfa:nfa26300 putative transcriptional regulator; regulatory protein ArsR 4207682..4208011 Mycobacterium vanbaalenii PYR-1 4646228 YP_954721.1 CDS Mvan_3938 NC_008726.1 4208011 4208619 D KEGG: mmc:Mmcs_4188 cation efflux protein; cation efflux protein 4208011..4208619 Mycobacterium vanbaalenii PYR-1 4646229 YP_954722.1 CDS Mvan_3939 NC_008726.1 4208642 4209244 D KEGG: nfa:pnf1430 hypothetical protein; hypothetical protein 4208642..4209244 Mycobacterium vanbaalenii PYR-1 4646230 YP_954723.1 CDS nadE NC_008726.1 4209234 4211276 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(4209234..4211276) Mycobacterium vanbaalenii PYR-1 4646231 YP_954724.1 CDS Mvan_3941 NC_008726.1 4211498 4212058 D PFAM: heat shock protein Hsp20; KEGG: mbo:Mb2057c heat shock protein HspX (alpha-crstallin homolog) (14 kDa antigen) (HSP16.3); heat shock protein Hsp20 4211498..4212058 Mycobacterium vanbaalenii PYR-1 4646232 YP_954725.1 CDS Mvan_3942 NC_008726.1 4212077 4212955 D PFAM: Silent information regulator protein Sir2; KEGG: mmc:Mmcs_3545 silent information regulator protein Sir2; silent information regulator protein Sir2 4212077..4212955 Mycobacterium vanbaalenii PYR-1 4646233 YP_954726.1 CDS Mvan_3943 NC_008726.1 4212899 4213999 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(4212899..4213999) Mycobacterium vanbaalenii PYR-1 4646234 YP_954727.1 CDS obgE NC_008726.1 4213996 4215438 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(4213996..4215438) Mycobacterium vanbaalenii PYR-1 4646235 YP_954728.1 CDS rpmA NC_008726.1 4215528 4215794 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(4215528..4215794) Mycobacterium vanbaalenii PYR-1 4646236 YP_954729.1 CDS rplU NC_008726.1 4215813 4216136 R PFAM: ribosomal protein L21; KEGG: mpa:MAP2266c 50S ribosomal protein L21; 50S ribosomal protein L21 complement(4215813..4216136) Mycobacterium vanbaalenii PYR-1 4646237 YP_954730.1 CDS Mvan_3947 NC_008726.1 4216293 4219178 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family; ribonuclease complement(4216293..4219178) Mycobacterium vanbaalenii PYR-1 4646238 YP_954731.1 CDS ndk NC_008726.1 4219489 4219899 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(4219489..4219899) Mycobacterium vanbaalenii PYR-1 4646239 YP_954732.1 CDS Mvan_3949 NC_008726.1 4219910 4220296 R KEGG: mmc:Mmcs_3556 hypothetical protein; hypothetical protein complement(4219910..4220296) Mycobacterium vanbaalenii PYR-1 4646240 YP_954733.1 CDS Mvan_3950 NC_008726.1 4220293 4221708 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: mmc:Mmcs_3557 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(4220293..4221708) Mycobacterium vanbaalenii PYR-1 4646241 YP_954734.1 CDS valS NC_008726.1 4221724 4224417 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(4221724..4224417) Mycobacterium vanbaalenii PYR-1 4646242 YP_954735.1 CDS Mvan_3952 NC_008726.1 4224472 4225059 R KEGG: nfa:nfa6090 hypothetical protein; hypothetical protein complement(4224472..4225059) Mycobacterium vanbaalenii PYR-1 4646243 YP_954736.1 CDS Mvan_3953 NC_008726.1 4225104 4226369 R PFAM: Saccharopine dehydrogenase; KEGG: mmc:Mmcs_3559 saccharopine dehydrogenase; saccharopine dehydrogenase complement(4225104..4226369) Mycobacterium vanbaalenii PYR-1 4646244 YP_954737.1 CDS Mvan_3954 NC_008726.1 4226381 4228465 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: mmc:Mmcs_3560 peptidase S9, prolyl oligopeptidase active site region; peptidase S9 prolyl oligopeptidase complement(4226381..4228465) Mycobacterium vanbaalenii PYR-1 4646245 YP_954738.1 CDS Mvan_3955 NC_008726.1 4228605 4229936 D PFAM: Rh family protein/ammonium transporter; KEGG: sil:SPO1578 ammonium transporter family protein; Rh family protein/ammonium transporter 4228605..4229936 Mycobacterium vanbaalenii PYR-1 4646246 YP_954739.1 CDS Mvan_3956 NC_008726.1 4229937 4230155 D hypothetical protein 4229937..4230155 Mycobacterium vanbaalenii PYR-1 4646948 YP_954740.1 CDS Mvan_3957 NC_008726.1 4230246 4231223 R KEGG: rha:RHA1_ro02825 hypothetical protein; hypothetical protein complement(4230246..4231223) Mycobacterium vanbaalenii PYR-1 4646949 YP_954741.1 CDS Mvan_3958 NC_008726.1 4231220 4232173 R PFAM: ferredoxin; KEGG: nfa:nfa21080 putative oxidoreductase; ferredoxin complement(4231220..4232173) Mycobacterium vanbaalenii PYR-1 4646950 YP_954742.1 CDS Mvan_3959 NC_008726.1 4232170 4232715 R KEGG: mfa:Mfla_0440 hypothetical protein; hypothetical protein complement(4232170..4232715) Mycobacterium vanbaalenii PYR-1 4646951 YP_954743.1 CDS Mvan_3960 NC_008726.1 4232833 4233999 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3561 monooxygenase, FAD-binding protein; FAD-binding monooxygenase 4232833..4233999 Mycobacterium vanbaalenii PYR-1 4646952 YP_954744.1 CDS Mvan_3961 NC_008726.1 4234061 4234573 R PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_3563 transglycosylase-like protein; transglycosylase domain-containing protein complement(4234061..4234573) Mycobacterium vanbaalenii PYR-1 4646953 YP_954745.1 CDS Mvan_3962 NC_008726.1 4234804 4235139 R PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_3564 transglycosylase-like protein; transglycosylase domain-containing protein complement(4234804..4235139) Mycobacterium vanbaalenii PYR-1 4646954 YP_954746.1 CDS Mvan_3963 NC_008726.1 4236110 4236763 R MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A complement(4236110..4236763) Mycobacterium vanbaalenii PYR-1 4646955 YP_954747.1 CDS Mvan_3964 NC_008726.1 4236796 4237878 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(4236796..4237878) Mycobacterium vanbaalenii PYR-1 4646956 YP_954748.1 CDS Mvan_3965 NC_008726.1 4237907 4239916 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_3567 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4237907..4239916) Mycobacterium vanbaalenii PYR-1 4646957 YP_954749.1 CDS Mvan_3966 NC_008726.1 4240212 4241222 R SMART: regulatory protein, LacI; KEGG: sma:SAV7191 putative DNA-binding protein; regulatory protein LacI complement(4240212..4241222) Mycobacterium vanbaalenii PYR-1 4646958 YP_954750.1 CDS Mvan_3967 NC_008726.1 4241278 4242480 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: sma:SAV7190 hypothetical protein; phytanoyl-CoA dioxygenase 4241278..4242480 Mycobacterium vanbaalenii PYR-1 4646959 YP_954751.1 CDS Mvan_3968 NC_008726.1 4242477 4243505 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sma:SAV7188 putative oxidoreductase; inositol 2-dehydrogenase 4242477..4243505 Mycobacterium vanbaalenii PYR-1 4646960 YP_954752.1 CDS Mvan_3969 NC_008726.1 4243502 4244374 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pac:PPA0468 putative myo-inositol catabolism protein; xylose isomerase domain-containing protein 4243502..4244374 Mycobacterium vanbaalenii PYR-1 4646961 YP_954753.1 CDS Mvan_3970 NC_008726.1 4244371 4245333 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: atc:AGR_pAT_7 hypothetical protein; oxidoreductase domain-containing protein 4244371..4245333 Mycobacterium vanbaalenii PYR-1 4646962 YP_954754.1 CDS Mvan_3971 NC_008726.1 4245387 4246652 R KEGG: mmc:Mmcs_4038 hypothetical protein; hypothetical protein complement(4245387..4246652) Mycobacterium vanbaalenii PYR-1 4646963 YP_954755.1 CDS Mvan_3972 NC_008726.1 4246831 4247097 R hypothetical protein complement(4246831..4247097) Mycobacterium vanbaalenii PYR-1 4646964 YP_954756.1 CDS Mvan_3973 NC_008726.1 4247187 4248386 R PFAM: regulatory protein, LuxR; GAF domain protein; Bacterio-opsin activator, HTH domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rxy:Rxyl_2511 two component transcriptional regulator, LuxR family; putative GAF sensor protein complement(4247187..4248386) Mycobacterium vanbaalenii PYR-1 4646965 YP_954757.1 CDS Mvan_3974 NC_008726.1 4248516 4249757 D PFAM: cytochrome P450; KEGG: rpd:RPD_0041 cytochrome P450; cytochrome P450 4248516..4249757 Mycobacterium vanbaalenii PYR-1 4646966 YP_954758.1 CDS Mvan_3975 NC_008726.1 4249754 4250167 D KEGG: reu:Reut_A1634 hypothetical protein; hypothetical protein 4249754..4250167 Mycobacterium vanbaalenii PYR-1 4646967 YP_954759.1 CDS Mvan_3976 NC_008726.1 4250164 4250358 D KEGG: fra:Francci3_1600 putative ferredoxin; putative ferredoxin 4250164..4250358 Mycobacterium vanbaalenii PYR-1 4646968 YP_954760.1 CDS Mvan_3977 NC_008726.1 4250369 4251808 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2023 virulence factor mce family protein; virulence factor Mce family protein complement(4250369..4251808) Mycobacterium vanbaalenii PYR-1 4646969 YP_954761.1 CDS Mvan_3978 NC_008726.1 4251809 4252951 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2022 virulence factor mce family protein; virulence factor Mce family protein complement(4251809..4252951) Mycobacterium vanbaalenii PYR-1 4646970 YP_954762.1 CDS Mvan_3979 NC_008726.1 4252948 4254225 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2021 virulence factor mce family protein; virulence factor Mce family protein complement(4252948..4254225) Mycobacterium vanbaalenii PYR-1 4646971 YP_954763.1 CDS Mvan_3980 NC_008726.1 4254222 4255454 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2020 virulence factor mce family protein; virulence factor Mce family protein complement(4254222..4255454) Mycobacterium vanbaalenii PYR-1 4646972 YP_954764.1 CDS Mvan_3981 NC_008726.1 4255451 4256479 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2019 virulence factor mce family protein; virulence factor Mce family protein complement(4255451..4256479) Mycobacterium vanbaalenii PYR-1 4647590 YP_954765.1 CDS Mvan_3982 NC_008726.1 4256511 4257887 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2018 virulence factor; virulence factor Mce family protein complement(4256511..4257887) Mycobacterium vanbaalenii PYR-1 4647591 YP_954766.1 CDS Mvan_3983 NC_008726.1 4257890 4258744 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1523 protein of unknown function DUF140; hypothetical protein complement(4257890..4258744) Mycobacterium vanbaalenii PYR-1 4647592 YP_954767.1 CDS Mvan_3984 NC_008726.1 4258754 4259527 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140; hypothetical protein complement(4258754..4259527) Mycobacterium vanbaalenii PYR-1 4647593 YP_954768.1 CDS Mvan_3985 NC_008726.1 4260005 4261282 R PFAM: regulatory protein, TetR; KEGG: fra:Francci3_2475 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4260005..4261282) Mycobacterium vanbaalenii PYR-1 4647594 YP_954769.1 CDS Mvan_3986 NC_008726.1 4261337 4262521 D PFAM: Thiolase; KEGG: fra:Francci3_2474 thiolase; lipid-transfer protein 4261337..4262521 Mycobacterium vanbaalenii PYR-1 4647595 YP_954770.1 CDS Mvan_3987 NC_008726.1 4262524 4262982 D KEGG: reu:Reut_B4756 hypothetical protein; hypothetical protein 4262524..4262982 Mycobacterium vanbaalenii PYR-1 4647596 YP_954771.1 CDS Mvan_3988 NC_008726.1 4262979 4263389 D PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_1539 MaoC-like dehydratase; dehydratase 4262979..4263389 Mycobacterium vanbaalenii PYR-1 4647597 YP_954772.1 CDS Mvan_3989 NC_008726.1 4263408 4264238 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: reu:Reut_B4754 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4263408..4264238 Mycobacterium vanbaalenii PYR-1 4647598 YP_954773.1 CDS Mvan_3990 NC_008726.1 4264235 4265038 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: tfu:Tfu_0067 probable enoyl-CoA hydratase (unsaturated acyl-CoA hydratase) (crotonase); enoyl-CoA hydratase/isomerase complement(4264235..4265038) Mycobacterium vanbaalenii PYR-1 4647599 YP_954774.1 CDS Mvan_3991 NC_008726.1 4265221 4266126 D PFAM: regulatory protein, LuxR; GAF domain protein; KEGG: tfu:Tfu_2278 regulatory protein, LuxR:response regulator receiver; putative GAF sensor protein 4265221..4266126 Mycobacterium vanbaalenii PYR-1 4647600 YP_954775.1 CDS Mvan_3992 NC_008726.1 4266214 4267503 D KEGG: mpa:MAP2261c hypothetical protein; hypothetical protein 4266214..4267503 Mycobacterium vanbaalenii PYR-1 4647601 YP_954776.1 CDS Mvan_3993 NC_008726.1 4267500 4269074 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1515 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4267500..4269074 Mycobacterium vanbaalenii PYR-1 4647602 YP_954777.1 CDS Mvan_3994 NC_008726.1 4269255 4270430 D PFAM: regulatory protein, TetR; KEGG: mbo:Mb1998c probable transcriptional regulatory protein; TetR family transcriptional regulator 4269255..4270430 Mycobacterium vanbaalenii PYR-1 4647603 YP_954778.1 CDS Mvan_3995 NC_008726.1 4270455 4271837 R KEGG: mxa:MXAN_0689 hypothetical protein; hypothetical protein complement(4270455..4271837) Mycobacterium vanbaalenii PYR-1 4647604 YP_954779.1 CDS Mvan_3996 NC_008726.1 4271939 4272808 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: gvi:gll3227 probable transcriptional regulator; helix-turn-helix domain-containing protein complement(4271939..4272808) Mycobacterium vanbaalenii PYR-1 4647605 YP_954780.1 CDS Mvan_3997 NC_008726.1 4273012 4273773 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mba:Mbar_A0777 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; short-chain dehydrogenase/reductase SDR 4273012..4273773 Mycobacterium vanbaalenii PYR-1 4647606 YP_954781.1 CDS Mvan_3998 NC_008726.1 4273880 4274914 D PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb1973 probable epoxide hydrolase EphB (epoxide hydratase); alpha/beta hydrolase fold protein 4273880..4274914 Mycobacterium vanbaalenii PYR-1 4647607 YP_954782.1 CDS Mvan_3999 NC_008726.1 4274939 4275709 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mbo:Mb1976 probable short-chain type dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(4274939..4275709) Mycobacterium vanbaalenii PYR-1 4647608 YP_954783.1 CDS Mvan_4000 NC_008726.1 4275747 4276826 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mbo:Mb1975 probable riboflavin biosynthesis protein RibA1 (GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(4275747..4276826) Mycobacterium vanbaalenii PYR-1 4647609 YP_954784.1 CDS Mvan_4001 NC_008726.1 4276813 4277331 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: mbo:Mb1974 probable oxidoreductase; flavin reductase domain-containing protein complement(4276813..4277331) Mycobacterium vanbaalenii PYR-1 4647610 YP_954785.1 CDS Mvan_4002 NC_008726.1 4277348 4278403 R PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb1973 probable epoxide hydrolase EphB (epoxide hydratase); alpha/beta hydrolase fold protein complement(4277348..4278403) Mycobacterium vanbaalenii PYR-1 4647611 YP_954786.1 CDS Mvan_4003 NC_008726.1 4278417 4280951 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mbo:Mb1972 possible oxygenase; oxidoreductase FAD-binding subunit complement(4278417..4280951) Mycobacterium vanbaalenii PYR-1 4647612 YP_954787.1 CDS Mvan_4004 NC_008726.1 4280982 4282091 R PFAM: luciferase family protein; KEGG: mbo:Mb1971 possible monooxygenase; luciferase family protein complement(4280982..4282091) Mycobacterium vanbaalenii PYR-1 4647613 YP_954788.1 CDS Mvan_4005 NC_008726.1 4282413 4283321 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4282413..4283321 Mycobacterium vanbaalenii PYR-1 4647614 YP_954789.1 CDS Mvan_4006 NC_008726.1 4283341 4284600 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mbo:Mb1969c probable acyl-CoA dehydrogenase FadE17; acyl-CoA dehydrogenase domain-containing protein 4283341..4284600 Mycobacterium vanbaalenii PYR-1 4647615 YP_954790.1 CDS Mvan_4007 NC_008726.1 4284602 4285699 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mbo:Mb1968c probable acyl-CoA dehydrogenase FadE18; acyl-CoA dehydrogenase domain-containing protein 4284602..4285699 Mycobacterium vanbaalenii PYR-1 4647463 YP_954791.1 CDS Mvan_4008 NC_008726.1 4285723 4288854 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4437 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4285723..4288854 Mycobacterium vanbaalenii PYR-1 4647464 YP_954792.1 CDS Mvan_4009 NC_008726.1 4289127 4289951 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6259 probable ABC sugar transport ATP binding protein; ABC transporter--like protein complement(4289127..4289951) Mycobacterium vanbaalenii PYR-1 4647465 YP_954793.1 CDS Mvan_4010 NC_008726.1 4289956 4291014 R PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro01346 ABC sugar transporter, permease component; inner-membrane translocator complement(4289956..4291014) Mycobacterium vanbaalenii PYR-1 4647466 YP_954794.1 CDS Mvan_4011 NC_008726.1 4291014 4292000 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV7151 putative sugar ABC transporter substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(4291014..4292000) Mycobacterium vanbaalenii PYR-1 4647467 YP_954795.1 CDS Mvan_4012 NC_008726.1 4292328 4293110 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: psp:PSPPH_2335 AP endonuclease, family 2 superfamily; xylose isomerase domain-containing protein 4292328..4293110 Mycobacterium vanbaalenii PYR-1 4647468 YP_954796.1 CDS Mvan_4013 NC_008726.1 4293188 4293943 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: rha:RHA1_ro06865 5-amino-6-(5-phosphoribosylamino)uracil reductase; deaminase-reductase domain-containing protein complement(4293188..4293943) Mycobacterium vanbaalenii PYR-1 4647469 YP_954797.1 CDS Mvan_4014 NC_008726.1 4293940 4295454 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3970 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(4293940..4295454) Mycobacterium vanbaalenii PYR-1 4647470 YP_954798.1 CDS Mvan_4015 NC_008726.1 4295604 4296335 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: sma:SAV1984 GntR-family transcriptional regulator; UbiC transcription regulator-associated domain-containing protein complement(4295604..4296335) Mycobacterium vanbaalenii PYR-1 4647471 YP_954799.1 CDS Mvan_4016 NC_008726.1 4296496 4297464 D PFAM: PfkB domain protein; KEGG: cgb:cg0197 sugar kinase, ribokinase family; ribokinase-like domain-containing protein 4296496..4297464 Mycobacterium vanbaalenii PYR-1 4647472 YP_954800.1 CDS Mvan_4017 NC_008726.1 4297457 4298341 D KEGG: rha:RHA1_ro01351 hypothetical protein; hypothetical protein 4297457..4298341 Mycobacterium vanbaalenii PYR-1 4647473 YP_954801.1 CDS Mvan_4018 NC_008726.1 4298338 4299216 D PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein; myo-inositol catabolism IolB domain-containing protein 4298338..4299216 Mycobacterium vanbaalenii PYR-1 4647474 YP_954802.1 CDS Mvan_4019 NC_008726.1 4299219 4301168 D PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rxy:Rxyl_1718 thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate binding domain-containing protein 4299219..4301168 Mycobacterium vanbaalenii PYR-1 4647475 YP_954803.1 CDS Mvan_4020 NC_008726.1 4301177 4302205 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sma:SAV1234 putative myo-inositol dehydrogenase; inositol 2-dehydrogenase 4301177..4302205 Mycobacterium vanbaalenii PYR-1 4647476 YP_954804.1 CDS Mvan_4021 NC_008726.1 4302263 4302640 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_5310 thioredoxin; thioredoxin complement(4302263..4302640) Mycobacterium vanbaalenii PYR-1 4647477 YP_954805.1 CDS Mvan_4022 NC_008726.1 4302675 4303877 R PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4302675..4303877) Mycobacterium vanbaalenii PYR-1 4647478 YP_954806.1 CDS Mvan_4023 NC_008726.1 4303984 4305363 R PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: mmc:Mmcs_5312 beta-lactamase-like protein; beta-lactamase domain-containing protein complement(4303984..4305363) Mycobacterium vanbaalenii PYR-1 4647479 YP_954807.1 CDS Mvan_4024 NC_008726.1 4305560 4306237 D PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_5313 rhodanese-like protein; rhodanese domain-containing protein 4305560..4306237 Mycobacterium vanbaalenii PYR-1 4647480 YP_954808.1 CDS Mvan_4025 NC_008726.1 4306243 4307118 D PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_5314 protein of unknown function DUF81; hypothetical protein 4306243..4307118 Mycobacterium vanbaalenii PYR-1 4647481 YP_954809.1 CDS Mvan_4026 NC_008726.1 4307180 4307452 D PFAM: protein of unknown function DUF156; KEGG: mmc:Mmcs_5315 protein of unknown function DUF156; hypothetical protein 4307180..4307452 Mycobacterium vanbaalenii PYR-1 4647482 YP_954810.1 CDS Mvan_4027 NC_008726.1 4307498 4308145 D PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_0055 hypothetical protein; type 12 methyltransferase 4307498..4308145 Mycobacterium vanbaalenii PYR-1 4647483 YP_954811.1 CDS Mvan_4028 NC_008726.1 4308244 4308576 D PFAM: Rhodanese domain protein; KEGG: lxx:Lxx10820 thiosulfate sulfurtransferase; rhodanese domain-containing protein 4308244..4308576 Mycobacterium vanbaalenii PYR-1 4647484 YP_954812.1 CDS Mvan_4029 NC_008726.1 4308598 4309218 R PFAM: DSBA oxidoreductase; KEGG: rxy:Rxyl_2566 dithiol-disulfide isomerase involved in polyketide biosynthesis-like protein; DSBA oxidoreductase complement(4308598..4309218) Mycobacterium vanbaalenii PYR-1 4647485 YP_954813.1 CDS Mvan_4030 NC_008726.1 4309324 4311501 R PFAM: glutamine synthetase, catalytic region; KEGG: dde:Dde_0102 glutamine synthetase, type III; glutamine synthetase complement(4309324..4311501) Mycobacterium vanbaalenii PYR-1 4647486 YP_954814.1 CDS Mvan_4031 NC_008726.1 4311598 4312542 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mpa:MAP3522 OxyS_1; LysR family transcriptional regulator complement(4311598..4312542) Mycobacterium vanbaalenii PYR-1 4647487 YP_954815.1 CDS Mvan_4032 NC_008726.1 4312659 4314971 D KEGG: mbo:Mb2924c possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H); TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit 4312659..4314971 Mycobacterium vanbaalenii PYR-1 4643461 YP_954816.1 CDS Mvan_4033 NC_008726.1 4314973 4315836 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4314973..4315836 Mycobacterium vanbaalenii PYR-1 4643462 YP_954817.1 CDS Mvan_4034 NC_008726.1 4315909 4317219 D TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; protein of unknown function DUF1205; KEGG: mmc:Mmcs_3573 glycosyltransferase, MGT family; glycosyl transferase family protein 4315909..4317219 Mycobacterium vanbaalenii PYR-1 4643463 YP_954818.1 CDS Mvan_4035 NC_008726.1 4317230 4318528 D TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mmc:Mmcs_3573 glycosyltransferase, MGT family; glycosyl transferase family protein 4317230..4318528 Mycobacterium vanbaalenii PYR-1 4648436 YP_954819.1 CDS clpX NC_008726.1 4318802 4320082 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(4318802..4320082) Mycobacterium vanbaalenii PYR-1 4648437 YP_954820.1 CDS Mvan_4037 NC_008726.1 4320438 4320773 R hypothetical protein complement(4320438..4320773) Mycobacterium vanbaalenii PYR-1 4648438 YP_954821.1 CDS Mvan_4038 NC_008726.1 4320900 4321343 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1592 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 4320900..4321343 Mycobacterium vanbaalenii PYR-1 4648439 YP_954822.1 CDS Mvan_4039 NC_008726.1 4321349 4321987 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(4321349..4321987) Mycobacterium vanbaalenii PYR-1 4648440 YP_954823.1 CDS clpP NC_008726.1 4321984 4322568 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(4321984..4322568) Mycobacterium vanbaalenii PYR-1 4648441 YP_954824.1 CDS tig NC_008726.1 4322692 4324113 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(4322692..4324113) Mycobacterium vanbaalenii PYR-1 4648442 YP_954825.1 CDS Mvan_4042 NC_008726.1 4324594 4324860 R hypothetical protein complement(4324594..4324860) Mycobacterium vanbaalenii PYR-1 4643465 YP_954826.1 CDS Mvan_4043 NC_008726.1 4325348 4326448 D hypothetical protein 4325348..4326448 Mycobacterium vanbaalenii PYR-1 4643466 YP_954827.1 CDS Mvan_4044 NC_008726.1 4326646 4327032 D KEGG: mtc:MT0066.1 hypothetical protein; hypothetical protein 4326646..4327032 Mycobacterium vanbaalenii PYR-1 4643467 YP_954828.1 CDS Mvan_4045 NC_008726.1 4327029 4327277 R hypothetical protein complement(4327029..4327277) Mycobacterium vanbaalenii PYR-1 4643468 YP_954829.1 CDS Mvan_4046 NC_008726.1 4327697 4328317 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP0074 hypothetical protein; TetR family transcriptional regulator complement(4327697..4328317) Mycobacterium vanbaalenii PYR-1 4643469 YP_954830.1 CDS Mvan_4047 NC_008726.1 4328400 4329278 D PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_1481 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4328400..4329278 Mycobacterium vanbaalenii PYR-1 4643470 YP_954831.1 CDS Mvan_4048 NC_008726.1 4329553 4330983 D PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sma:SAV4081 lipoprotein; FAD linked oxidase domain-containing protein 4329553..4330983 Mycobacterium vanbaalenii PYR-1 4643471 YP_954832.1 CDS Mvan_4049 NC_008726.1 4331060 4331875 D KEGG: mmc:Mmcs_3596 hypothetical protein; hypothetical protein 4331060..4331875 Mycobacterium vanbaalenii PYR-1 4643472 YP_954833.1 CDS Mvan_4050 NC_008726.1 4331872 4333560 R PFAM: sodium/hydrogen exchanger; KEGG: mmc:Mmcs_3597 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(4331872..4333560) Mycobacterium vanbaalenii PYR-1 4643473 YP_954834.1 CDS Mvan_4051 NC_008726.1 4333607 4334413 R PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mbo:Mb2491c possible DNA glycosylase; formamidopyrimidine-DNA glycolase complement(4333607..4334413) Mycobacterium vanbaalenii PYR-1 4643474 YP_954835.1 CDS Mvan_4052 NC_008726.1 4334417 4336039 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(4334417..4336039) Mycobacterium vanbaalenii PYR-1 4643475 YP_954836.1 CDS Mvan_4053 NC_008726.1 4336123 4336596 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(4336123..4336596) Mycobacterium vanbaalenii PYR-1 4643476 YP_954837.1 CDS Mvan_4054 NC_008726.1 4336703 4337662 R PFAM: 2OG-Fe(II) oxygenase; KEGG: mmc:Mmcs_3600 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(4336703..4337662) Mycobacterium vanbaalenii PYR-1 4643477 YP_954838.1 CDS Mvan_4055 NC_008726.1 4337659 4338153 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mmc:Mmcs_3601 CMP/dCMP deaminase, zinc-binding protein; CMP/dCMP deaminase complement(4337659..4338153) Mycobacterium vanbaalenii PYR-1 4643478 YP_954839.1 CDS Mvan_4056 NC_008726.1 4338226 4338846 R KEGG: mmc:Mmcs_3603 DsbA oxidoreductase; DsbA oxidoreductase complement(4338226..4338846) Mycobacterium vanbaalenii PYR-1 4643479 YP_954840.1 CDS Mvan_4057 NC_008726.1 4338932 4341541 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mmc:Mmcs_3605 peptidase M1, aminopeptidase N actinomycete-type; aminopeptidase N 4338932..4341541 Mycobacterium vanbaalenii PYR-1 4643480 YP_954841.1 CDS Mvan_4058 NC_008726.1 4341606 4342055 D SMART: HNH nuclease; KEGG: mmc:Mmcs_3606 HNH nuclease; HNH nuclease 4341606..4342055 Mycobacterium vanbaalenii PYR-1 4643481 YP_954842.1 CDS Mvan_4059 NC_008726.1 4342072 4342554 R hypothetical protein complement(4342072..4342554) Mycobacterium vanbaalenii PYR-1 4643482 YP_954843.1 CDS Mvan_4060 NC_008726.1 4342554 4343684 R KEGG: mmc:Mmcs_4791 hypothetical protein; hypothetical protein complement(4342554..4343684) Mycobacterium vanbaalenii PYR-1 4643483 YP_954844.1 CDS Mvan_4061 NC_008726.1 4343767 4344243 R KEGG: mmc:Mmcs_3607 hypothetical protein; hypothetical protein complement(4343767..4344243) Mycobacterium vanbaalenii PYR-1 4643484 YP_954845.1 CDS Mvan_4062 NC_008726.1 4344230 4344463 R KEGG: mtc:MT2544 hypothetical protein; hypothetical protein complement(4344230..4344463) Mycobacterium vanbaalenii PYR-1 4649273 YP_954846.1 CDS Mvan_4063 NC_008726.1 4344489 4345154 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3609 HNH endonuclease; HNH endonuclease complement(4344489..4345154) Mycobacterium vanbaalenii PYR-1 4649274 YP_954847.1 CDS Mvan_4064 NC_008726.1 4345357 4346523 D KEGG: dra:DRA0146 hypothetical protein; hypothetical protein 4345357..4346523 Mycobacterium vanbaalenii PYR-1 4649275 YP_954848.1 CDS Mvan_4065 NC_008726.1 4346602 4349196 D PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: nfa:nfa53720 putative transcriptional regulator; response regulator receiver protein 4346602..4349196 Mycobacterium vanbaalenii PYR-1 4649276 YP_954849.1 CDS Mvan_4066 NC_008726.1 4349226 4349636 D PFAM: globin; KEGG: mmc:Mmcs_3610 globin; globin 4349226..4349636 Mycobacterium vanbaalenii PYR-1 4649277 YP_954850.1 CDS Mvan_4067 NC_008726.1 4349742 4350410 R KEGG: mmc:Mmcs_3612 hypothetical protein; hypothetical protein complement(4349742..4350410) Mycobacterium vanbaalenii PYR-1 4649278 YP_954851.1 CDS Mvan_4068 NC_008726.1 4350407 4350826 R KEGG: mmc:Mmcs_3613 hypothetical protein; hypothetical protein complement(4350407..4350826) Mycobacterium vanbaalenii PYR-1 4649279 YP_954852.1 CDS Mvan_4069 NC_008726.1 4350823 4355706 R PFAM: NAD-glutamate dehydrogenase; KEGG: mmc:Mmcs_3614 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase complement(4350823..4355706) Mycobacterium vanbaalenii PYR-1 4649280 YP_954853.1 CDS Mvan_4070 NC_008726.1 4355803 4357476 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(4355803..4357476) Mycobacterium vanbaalenii PYR-1 4649281 YP_954854.1 CDS Mvan_4071 NC_008726.1 4357749 4359296 R PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein; transposase, IS4 family protein complement(4357749..4359296) Mycobacterium vanbaalenii PYR-1 4649282 YP_954855.1 CDS Mvan_4072 NC_008726.1 4359362 4359850 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpa:MAP2296c single-strand DNA binding protein; hypothetical protein complement(4359362..4359850) Mycobacterium vanbaalenii PYR-1 4649283 YP_954856.1 CDS Mvan_4073 NC_008726.1 4360159 4362177 R PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_3617 copper resistance D; copper resistance D domain-containing protein complement(4360159..4362177) Mycobacterium vanbaalenii PYR-1 4649284 YP_954857.1 CDS Mvan_4074 NC_008726.1 4362209 4364560 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(4362209..4364560) Mycobacterium vanbaalenii PYR-1 4649285 YP_954858.1 CDS Mvan_4075 NC_008726.1 4364557 4366134 R KEGG: mmc:Mmcs_3619 HAD-superfamily subfamily IB, PSPase-like protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: phospholipid/glycerol acyltransferase; HAD family hydrolase complement(4364557..4366134) Mycobacterium vanbaalenii PYR-1 4649286 YP_954859.1 CDS Mvan_4076 NC_008726.1 4366161 4367648 R PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3620 protein of unknown function UPF0089; hypothetical protein complement(4366161..4367648) Mycobacterium vanbaalenii PYR-1 4649287 YP_954860.1 CDS Mvan_4077 NC_008726.1 4368211 4370775 R PFAM: peptidase S15; KEGG: sma:SAV5344 putative ABC transporter ATP-binding protein; peptidase S15 complement(4368211..4370775) Mycobacterium vanbaalenii PYR-1 4649289 YP_954861.1 CDS Mvan_4078 NC_008726.1 4370871 4371680 R PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: nfa:nfa21420 putative transcriptional regulator; TetR family transcriptional regulator complement(4370871..4371680) Mycobacterium vanbaalenii PYR-1 4649290 YP_954862.1 CDS Mvan_4079 NC_008726.1 4371772 4372173 D hypothetical protein 4371772..4372173 Mycobacterium vanbaalenii PYR-1 4649291 YP_954863.1 CDS Mvan_4080 NC_008726.1 4372306 4373040 D PFAM: dienelactone hydrolase; KEGG: mca:MCA1803 dienelactone hydrolase family protein; dienelactone hydrolase 4372306..4373040 Mycobacterium vanbaalenii PYR-1 4649292 YP_954864.1 CDS Mvan_4081 NC_008726.1 4373101 4374486 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_4312 hypothetical protein; hypothetical protein 4373101..4374486 Mycobacterium vanbaalenii PYR-1 4649293 YP_954865.1 CDS Mvan_4082 NC_008726.1 4374545 4375141 D PFAM: methyltransferase small; NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: cgb:cg2824 SAM-dependent methyltransferase; type 12 methyltransferase 4374545..4375141 Mycobacterium vanbaalenii PYR-1 4649294 YP_954866.1 CDS Mvan_4083 NC_008726.1 4375179 4375931 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4375179..4375931 Mycobacterium vanbaalenii PYR-1 4649295 YP_954867.1 CDS Mvan_4084 NC_008726.1 4375933 4377135 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mmc:Mmcs_3624 catalytic domain of components of various dehydrogenase complexes; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(4375933..4377135) Mycobacterium vanbaalenii PYR-1 4649296 YP_954868.1 CDS Mvan_4085 NC_008726.1 4377132 4378187 R PFAM: Transketolase, central region; Transketolase domain protein; KEGG: mmc:Mmcs_3625 transketolase, central region; transketolase, central region complement(4377132..4378187) Mycobacterium vanbaalenii PYR-1 4649297 YP_954869.1 CDS Mvan_4086 NC_008726.1 4378189 4379274 R PFAM: dehydrogenase, E1 component; KEGG: mmc:Mmcs_3626 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase complement(4378189..4379274) Mycobacterium vanbaalenii PYR-1 4648694 YP_954870.1 CDS Mvan_4087 NC_008726.1 4379375 4380190 R PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_3627 HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(4379375..4380190) Mycobacterium vanbaalenii PYR-1 4648695 YP_954871.1 CDS Mvan_4088 NC_008726.1 4380192 4380686 R PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_3628 MaoC-like dehydratase; dehydratase complement(4380192..4380686) Mycobacterium vanbaalenii PYR-1 4648696 YP_954872.1 CDS Mvan_4089 NC_008726.1 4380686 4381846 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3629 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4380686..4381846) Mycobacterium vanbaalenii PYR-1 4648697 YP_954873.1 CDS Mvan_4090 NC_008726.1 4381843 4383825 R PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_3630 carbamoyl-phosphate synthase L chain, ATP-binding protein; carbamoyl-phosphate synthase ATP-binding subunit L complement(4381843..4383825) Mycobacterium vanbaalenii PYR-1 4648698 YP_954874.1 CDS Mvan_4091 NC_008726.1 4383875 4385425 R PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3631 propionyl-CoA carboxylase; propionyl-CoA carboxylase complement(4383875..4385425) Mycobacterium vanbaalenii PYR-1 4648699 YP_954875.1 CDS Mvan_4092 NC_008726.1 4385519 4386139 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3632 transcriptional regulator, TetR family; TetR family transcriptional regulator 4385519..4386139 Mycobacterium vanbaalenii PYR-1 4648700 YP_954876.1 CDS Mvan_4093 NC_008726.1 4386143 4386298 R KEGG: mpa:MAP0258 hypothetical protein; hypothetical protein complement(4386143..4386298) Mycobacterium vanbaalenii PYR-1 4648701 YP_954877.1 CDS Mvan_4094 NC_008726.1 4386340 4386543 R KEGG: mmc:Mmcs_3634 hypothetical protein; hypothetical protein complement(4386340..4386543) Mycobacterium vanbaalenii PYR-1 4648702 YP_954878.1 CDS Mvan_4095 NC_008726.1 4386633 4388495 R PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: mmc:Mmcs_3635 peptidase S9, prolyl oligopeptidase active site region; peptidase S9 prolyl oligopeptidase complement(4386633..4388495) Mycobacterium vanbaalenii PYR-1 4648703 YP_954879.1 CDS Mvan_4096 NC_008726.1 4388588 4389454 D KEGG: mmc:Mmcs_3636 putative conserved proline rich membrane protein; hypothetical protein 4388588..4389454 Mycobacterium vanbaalenii PYR-1 4648704 YP_954880.1 CDS Mvan_4097 NC_008726.1 4389451 4390782 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3637 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(4389451..4390782) Mycobacterium vanbaalenii PYR-1 4648705 YP_954881.1 CDS Mvan_4098 NC_008726.1 4390808 4391614 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3638 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4390808..4391614 Mycobacterium vanbaalenii PYR-1 4648706 YP_954882.1 CDS Mvan_4099 NC_008726.1 4391622 4393214 R PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: mmc:Mmcs_3639 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein complement(4391622..4393214) Mycobacterium vanbaalenii PYR-1 4648707 YP_954883.1 CDS Mvan_4100 NC_008726.1 4393288 4393932 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4393288..4393932 Mycobacterium vanbaalenii PYR-1 4648708 YP_954884.1 CDS Mvan_4101 NC_008726.1 4394080 4394448 R PFAM: protein of unknown function DUF1486; KEGG: bja:bll3988 hypothetical protein; hypothetical protein complement(4394080..4394448) Mycobacterium vanbaalenii PYR-1 4648710 YP_954885.1 CDS Mvan_4102 NC_008726.1 4394462 4395682 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_3641 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(4394462..4395682) Mycobacterium vanbaalenii PYR-1 4648711 YP_954886.1 CDS Mvan_4103 NC_008726.1 4396021 4397382 R PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3408 protein of unknown function UPF0089; hypothetical protein complement(4396021..4397382) Mycobacterium vanbaalenii PYR-1 4648713 YP_954887.1 CDS Mvan_4104 NC_008726.1 4397379 4398794 R PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3541 protein of unknown function UPF0089; hypothetical protein complement(4397379..4398794) Mycobacterium vanbaalenii PYR-1 4648714 YP_954888.1 CDS Mvan_4105 NC_008726.1 4398987 4399985 D PFAM: PfkB domain protein; KEGG: mbo:Mb2054c probable phosphofructokinase PfkB (phosphohexokinase); ribokinase-like domain-containing protein 4398987..4399985 Mycobacterium vanbaalenii PYR-1 4648715 YP_954889.1 CDS Mvan_4106 NC_008726.1 4400173 4402569 D TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; KEGG: mmc:Mmcs_3406 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 4400173..4402569 Mycobacterium vanbaalenii PYR-1 4648716 YP_954890.1 CDS Mvan_4107 NC_008726.1 4402566 4406243 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mmc:Mmcs_3407 HAD-superfamily hydrolase subfamily IIB; HAD family hydrolase 4402566..4406243 Mycobacterium vanbaalenii PYR-1 4648866 YP_954891.1 CDS Mvan_4108 NC_008726.1 4406247 4407878 D unknown function; putative glutamate synthase (NADPH) small subunit 4406247..4407878 Mycobacterium vanbaalenii PYR-1 4648867 YP_954892.1 CDS Mvan_4109 NC_008726.1 4407878 4411459 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_4865 pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4407878..4411459 Mycobacterium vanbaalenii PYR-1 4648868 YP_954893.1 CDS Mvan_4110 NC_008726.1 4411459 4412469 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 4411459..4412469 Mycobacterium vanbaalenii PYR-1 4648869 YP_954894.1 CDS Mvan_4111 NC_008726.1 4412498 4413343 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_3672 protein of unknown function DUF140; hypothetical protein complement(4412498..4413343) Mycobacterium vanbaalenii PYR-1 4648870 YP_954895.1 CDS Mvan_4112 NC_008726.1 4413473 4414009 R KEGG: rme:Rmet_1526 HoxW protein; HoxW protein complement(4413473..4414009) Mycobacterium vanbaalenii PYR-1 4648871 YP_954896.1 CDS Mvan_4113 NC_008726.1 4414006 4415475 R PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rme:Rmet_1525 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit complement(4414006..4415475) Mycobacterium vanbaalenii PYR-1 4648872 YP_954897.1 CDS Mvan_4114 NC_008726.1 4415491 4416108 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rme:Rmet_1524 NADH ubiquinone oxidoreductase, 20 kDa subunit; hydrogen dehydrogenase complement(4415491..4416108) Mycobacterium vanbaalenii PYR-1 4648873 YP_954898.1 CDS Mvan_4115 NC_008726.1 4416105 4416824 R PFAM: ferredoxin; KEGG: rme:Rmet_1523 ferredoxin; hydrogen dehydrogenase complement(4416105..4416824) Mycobacterium vanbaalenii PYR-1 4648874 YP_954899.1 CDS Mvan_4116 NC_008726.1 4416821 4418632 R PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rme:Rmet_1522 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; hydrogen dehydrogenase complement(4416821..4418632) Mycobacterium vanbaalenii PYR-1 4648875 YP_954900.1 CDS Mvan_4117 NC_008726.1 4419006 4419725 R KEGG: mmc:Mmcs_3857 hypothetical protein; hypothetical protein complement(4419006..4419725) Mycobacterium vanbaalenii PYR-1 4648876 YP_954901.1 CDS Mvan_4118 NC_008726.1 4419833 4420207 R KEGG: mmc:Mmcs_3437 hypothetical protein; hypothetical protein complement(4419833..4420207) Mycobacterium vanbaalenii PYR-1 4648877 YP_954902.1 CDS Mvan_4119 NC_008726.1 4420745 4420972 R KEGG: mpa:MAP2328c hypothetical protein; hypothetical protein complement(4420745..4420972) Mycobacterium vanbaalenii PYR-1 4648878 YP_954903.1 CDS Mvan_4120 NC_008726.1 4421127 4421600 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mmc:Mmcs_3644 redoxin; redoxin domain-containing protein 4421127..4421600 Mycobacterium vanbaalenii PYR-1 4648879 YP_954904.1 CDS Mvan_4121 NC_008726.1 4421654 4423027 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mes:Meso_3879 beta-lactamase-like; beta-lactamase domain-containing protein complement(4421654..4423027) Mycobacterium vanbaalenii PYR-1 4648880 YP_954905.1 CDS Mvan_4122 NC_008726.1 4423155 4424537 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpa:MAP2330c hypothetical protein; hypothetical protein complement(4423155..4424537) Mycobacterium vanbaalenii PYR-1 4648881 YP_954906.1 CDS Mvan_4123 NC_008726.1 4424534 4425472 R KEGG: mmc:Mmcs_3646 formate/nitrite family of transporters-like protein; formate/nitrate transporter complement(4424534..4425472) Mycobacterium vanbaalenii PYR-1 4648882 YP_954907.1 CDS acpS NC_008726.1 4425540 4425941 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(4425540..4425941) Mycobacterium vanbaalenii PYR-1 4648883 YP_954908.1 CDS Mvan_4125 NC_008726.1 4425955 4435248 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase; dehydratase complement(4425955..4435248) Mycobacterium vanbaalenii PYR-1 4648884 YP_954909.1 CDS Mvan_4126 NC_008726.1 4436221 4437006 R PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_3650 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(4436221..4437006) Mycobacterium vanbaalenii PYR-1 4648885 YP_954910.1 CDS Mvan_4127 NC_008726.1 4437290 4438546 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3651 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4437290..4438546 Mycobacterium vanbaalenii PYR-1 4648886 YP_954911.1 CDS Mvan_4128 NC_008726.1 4438543 4439790 R PFAM: low temperature requirement A; KEGG: sma:SAV3683 hypothetical protein; low temperature requirement A complement(4438543..4439790) Mycobacterium vanbaalenii PYR-1 4648887 YP_954912.1 CDS Mvan_4129 NC_008726.1 4439890 4440606 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mta:Moth_2487 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4439890..4440606 Mycobacterium vanbaalenii PYR-1 4648888 YP_954913.1 CDS Mvan_4130 NC_008726.1 4440590 4441249 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: sco:SCO4233 4-diphodphocytidyl-2C-methyl-D-erythriol synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(4440590..4441249) Mycobacterium vanbaalenii PYR-1 4648889 YP_954914.1 CDS Mvan_4131 NC_008726.1 4441270 4441953 R KEGG: mmc:Mmcs_3653 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(4441270..4441953) Mycobacterium vanbaalenii PYR-1 4648890 YP_954915.1 CDS Mvan_4132 NC_008726.1 4441950 4442852 R KEGG: mmc:Mmcs_3654 hypothetical protein; hypothetical protein complement(4441950..4442852) Mycobacterium vanbaalenii PYR-1 4648891 YP_954916.1 CDS Mvan_4133 NC_008726.1 4443005 4444477 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(4443005..4444477) Mycobacterium vanbaalenii PYR-1 4648892 YP_954917.1 CDS Mvan_4134 NC_008726.1 4444474 4445664 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2; amidohydrolase 2 complement(4444474..4445664) Mycobacterium vanbaalenii PYR-1 4648893 YP_954918.1 CDS Mvan_4135 NC_008726.1 4445700 4447298 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3657 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4445700..4447298) Mycobacterium vanbaalenii PYR-1 4648894 YP_954919.1 CDS Mvan_4136 NC_008726.1 4447340 4448107 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3658 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4447340..4448107 Mycobacterium vanbaalenii PYR-1 4648895 YP_954920.1 CDS Mvan_4137 NC_008726.1 4448111 4448638 R KEGG: mmc:Mmcs_3733 hypothetical protein; hypothetical protein complement(4448111..4448638) Mycobacterium vanbaalenii PYR-1 4648896 YP_954921.1 CDS Mvan_4138 NC_008726.1 4448723 4449163 D PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein; hypothetical protein 4448723..4449163 Mycobacterium vanbaalenii PYR-1 4648897 YP_954922.1 CDS Mvan_4139 NC_008726.1 4449174 4450340 D KEGG: mmc:Mmcs_3660 thiolase; thiolase 4449174..4450340 Mycobacterium vanbaalenii PYR-1 4648898 YP_954923.1 CDS Mvan_4140 NC_008726.1 4450393 4451001 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3662 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4450393..4451001) Mycobacterium vanbaalenii PYR-1 4648899 YP_954924.1 CDS Mvan_4141 NC_008726.1 4451186 4452475 D PFAM: cytochrome P450; KEGG: mpa:MAP0774c hypothetical protein; cytochrome P450 4451186..4452475 Mycobacterium vanbaalenii PYR-1 4648900 YP_954925.1 CDS Mvan_4142 NC_008726.1 4452528 4452968 D KEGG: mmc:Mmcs_0283 hypothetical protein; hypothetical protein 4452528..4452968 Mycobacterium vanbaalenii PYR-1 4648901 YP_954926.1 CDS Mvan_4143 NC_008726.1 4452979 4453407 R KEGG: mmc:Mmcs_3664 hypothetical protein; hypothetical protein complement(4452979..4453407) Mycobacterium vanbaalenii PYR-1 4648902 YP_954927.1 CDS Mvan_4144 NC_008726.1 4453485 4454009 D KEGG: mmc:Mmcs_3665 hypothetical protein; hypothetical protein 4453485..4454009 Mycobacterium vanbaalenii PYR-1 4648903 YP_954928.1 CDS Mvan_4145 NC_008726.1 4454055 4455740 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3666 mammalian cell entry; virulence factor Mce family protein complement(4454055..4455740) Mycobacterium vanbaalenii PYR-1 4648904 YP_954929.1 CDS Mvan_4146 NC_008726.1 4455740 4457077 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3667 mammalian cell entry; virulence factor Mce family protein complement(4455740..4457077) Mycobacterium vanbaalenii PYR-1 4648905 YP_954930.1 CDS Mvan_4147 NC_008726.1 4457074 4458597 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3668 mammalian cell entry; virulence factor Mce family protein complement(4457074..4458597) Mycobacterium vanbaalenii PYR-1 4648906 YP_954931.1 CDS Mvan_4148 NC_008726.1 4458581 4459684 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3669 mammalian cell entry; virulence factor Mce family protein complement(4458581..4459684) Mycobacterium vanbaalenii PYR-1 4648907 YP_954932.1 CDS Mvan_4149 NC_008726.1 4459684 4460709 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3670 mammalian cell entry; virulence factor Mce family protein complement(4459684..4460709) Mycobacterium vanbaalenii PYR-1 4648908 YP_954933.1 CDS Mvan_4150 NC_008726.1 4460706 4461989 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3671 mammalian cell entry; virulence factor Mce family protein complement(4460706..4461989) Mycobacterium vanbaalenii PYR-1 4648909 YP_954934.1 CDS Mvan_4151 NC_008726.1 4461999 4462856 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_3672 protein of unknown function DUF140; hypothetical protein complement(4461999..4462856) Mycobacterium vanbaalenii PYR-1 4648910 YP_954935.1 CDS Mvan_4152 NC_008726.1 4462862 4463671 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_3673 protein of unknown function DUF140; hypothetical protein complement(4462862..4463671) Mycobacterium vanbaalenii PYR-1 4648911 YP_954936.1 CDS Mvan_4153 NC_008726.1 4463661 4464824 R KEGG: chy:CHY_1743 thiolase family protein; thiolase family protein complement(4463661..4464824) Mycobacterium vanbaalenii PYR-1 4648912 YP_954937.1 CDS Mvan_4154 NC_008726.1 4464821 4466014 R PFAM: protein of unknown function DUF35; KEGG: nph:NP2608A hydroxymethylglutaryl-CoA synthase 1; hypothetical protein complement(4464821..4466014) Mycobacterium vanbaalenii PYR-1 4648913 YP_954938.1 CDS Mvan_4155 NC_008726.1 4466045 4467253 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3675 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(4466045..4467253) Mycobacterium vanbaalenii PYR-1 4648914 YP_954939.1 CDS Mvan_4156 NC_008726.1 4467250 4468764 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_3676 aldehyde dehydrogenase; aldehyde dehydrogenase complement(4467250..4468764) Mycobacterium vanbaalenii PYR-1 4648915 YP_954940.1 CDS Mvan_4157 NC_008726.1 4469046 4469747 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3677 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4469046..4469747 Mycobacterium vanbaalenii PYR-1 4648916 YP_954941.1 CDS Mvan_4158 NC_008726.1 4469786 4470646 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3678 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4469786..4470646 Mycobacterium vanbaalenii PYR-1 4648186 YP_954942.1 CDS Mvan_4159 NC_008726.1 4470678 4470872 D KEGG: mmc:Mmcs_3679 hypothetical protein; hypothetical protein 4470678..4470872 Mycobacterium vanbaalenii PYR-1 4648187 YP_954943.1 CDS Mvan_4160 NC_008726.1 4470945 4472315 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_3680 cytochrome P450; cytochrome P450 4470945..4472315 Mycobacterium vanbaalenii PYR-1 4648188 YP_954944.1 CDS Mvan_4161 NC_008726.1 4472386 4472823 D KEGG: mmc:Mmcs_3681 hypothetical protein; hypothetical protein 4472386..4472823 Mycobacterium vanbaalenii PYR-1 4648189 YP_954945.1 CDS Mvan_4162 NC_008726.1 4472872 4474059 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3683 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4472872..4474059) Mycobacterium vanbaalenii PYR-1 4648190 YP_954946.1 CDS Mvan_4163 NC_008726.1 4474059 4475066 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3684 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4474059..4475066) Mycobacterium vanbaalenii PYR-1 4648191 YP_954947.1 CDS Mvan_4164 NC_008726.1 4475313 4476446 D PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3685 amidohydrolase 2; amidohydrolase 2 4475313..4476446 Mycobacterium vanbaalenii PYR-1 4648192 YP_954948.1 CDS Mvan_4165 NC_008726.1 4476463 4477605 D PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2; amidohydrolase 2 4476463..4477605 Mycobacterium vanbaalenii PYR-1 4648193 YP_954949.1 CDS Mvan_4166 NC_008726.1 4477609 4477998 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3687 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 4477609..4477998 Mycobacterium vanbaalenii PYR-1 4648194 YP_954950.1 CDS Mvan_4167 NC_008726.1 4478026 4478898 D KEGG: mmc:Mmcs_3688 hypothetical protein; hypothetical protein 4478026..4478898 Mycobacterium vanbaalenii PYR-1 4648195 YP_954951.1 CDS Mvan_4168 NC_008726.1 4478907 4479383 R KEGG: mmc:Mmcs_3689 hypothetical protein; hypothetical protein complement(4478907..4479383) Mycobacterium vanbaalenii PYR-1 4648196 YP_954952.1 CDS Mvan_4169 NC_008726.1 4479404 4480696 D PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mmc:Mmcs_3690 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; respiratory-chain NADH dehydrogenase domain-containing protein 4479404..4480696 Mycobacterium vanbaalenii PYR-1 4648197 YP_954953.1 CDS Mvan_4170 NC_008726.1 4480693 4480998 D KEGG: mmc:Mmcs_3691 hypothetical protein; hypothetical protein 4480693..4480998 Mycobacterium vanbaalenii PYR-1 4648198 YP_954954.1 CDS Mvan_4171 NC_008726.1 4481027 4482673 D PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35; hypothetical protein 4481027..4482673 Mycobacterium vanbaalenii PYR-1 4648199 YP_954955.1 CDS Mvan_4172 NC_008726.1 4482670 4483554 D KEGG: mpa:MAP0732c hypothetical protein; hypothetical protein 4482670..4483554 Mycobacterium vanbaalenii PYR-1 4648200 YP_954956.1 CDS Mvan_4173 NC_008726.1 4483554 4484372 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_3694 6-phosphogluconate dehydrogenase, NAD-binding protein; 6-phosphogluconate dehydrogenase 4483554..4484372 Mycobacterium vanbaalenii PYR-1 4648201 YP_954957.1 CDS Mvan_4174 NC_008726.1 4484402 4485172 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_3695 6-phosphogluconate dehydrogenase, NAD-binding protein; 6-phosphogluconate dehydrogenase 4484402..4485172 Mycobacterium vanbaalenii PYR-1 4648202 YP_954958.1 CDS Mvan_4175 NC_008726.1 4485295 4486497 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_3696 cytochrome P450; cytochrome P450 4485295..4486497 Mycobacterium vanbaalenii PYR-1 4648203 YP_954959.1 CDS Mvan_4176 NC_008726.1 4486494 4486694 D KEGG: mmc:Mmcs_3697 hypothetical protein; hypothetical protein 4486494..4486694 Mycobacterium vanbaalenii PYR-1 4648204 YP_954960.1 CDS Mvan_4177 NC_008726.1 4486705 4487490 D KEGG: mmc:Mmcs_3699 esterase EstC, putative; esterase EstC 4486705..4487490 Mycobacterium vanbaalenii PYR-1 4648205 YP_954961.1 CDS Mvan_4178 NC_008726.1 4487612 4487896 R PFAM: protein of unknown function DUF1330; KEGG: mmc:Mmcs_3704 protein of unknown function DUF1330; hypothetical protein complement(4487612..4487896) Mycobacterium vanbaalenii PYR-1 4648206 YP_954962.1 CDS Mvan_4179 NC_008726.1 4487916 4488107 R KEGG: mmc:Mmcs_3705 ferredoxin 1; ferredoxin 1 complement(4487916..4488107) Mycobacterium vanbaalenii PYR-1 4648207 YP_954963.1 CDS Mvan_4180 NC_008726.1 4488104 4489387 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_3706 cytochrome P450; cytochrome P450 complement(4488104..4489387) Mycobacterium vanbaalenii PYR-1 4648208 YP_954964.1 CDS Mvan_4181 NC_008726.1 4489487 4490008 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3707 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(4489487..4490008) Mycobacterium vanbaalenii PYR-1 4648209 YP_954965.1 CDS Mvan_4182 NC_008726.1 4490030 4490875 R PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: mmc:Mmcs_3708 taurine catabolism dioxygenase TauD/TfdA; taurine catabolism dioxygenase TauD/TfdA complement(4490030..4490875) Mycobacterium vanbaalenii PYR-1 4648210 YP_954966.1 CDS Mvan_4183 NC_008726.1 4490895 4491230 R KEGG: mmc:Mmcs_3709 hypothetical protein; hypothetical protein complement(4490895..4491230) Mycobacterium vanbaalenii PYR-1 4648334 YP_954967.1 CDS Mvan_4184 NC_008726.1 4491233 4492504 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3710 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(4491233..4492504) Mycobacterium vanbaalenii PYR-1 4648335 YP_954968.1 CDS Mvan_4185 NC_008726.1 4492541 4493287 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3711 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4492541..4493287) Mycobacterium vanbaalenii PYR-1 4648336 YP_954969.1 CDS Mvan_4186 NC_008726.1 4493321 4494361 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_3712 ferredoxin; ferredoxin complement(4493321..4494361) Mycobacterium vanbaalenii PYR-1 4648337 YP_954970.1 CDS Mvan_4187 NC_008726.1 4494480 4494956 R PFAM: regulatory protein, MarR; KEGG: mpa:MAP3139c hypothetical protein; MarR family transcriptional regulator complement(4494480..4494956) Mycobacterium vanbaalenii PYR-1 4648338 YP_954971.1 CDS Mvan_4188 NC_008726.1 4494966 4496231 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3715 amidohydrolase; amidohydrolase complement(4494966..4496231) Mycobacterium vanbaalenii PYR-1 4648339 YP_954972.1 CDS Mvan_4189 NC_008726.1 4496228 4496578 R KEGG: mmc:Mmcs_3716 hypothetical protein; hypothetical protein complement(4496228..4496578) Mycobacterium vanbaalenii PYR-1 4648340 YP_954973.1 CDS Mvan_4190 NC_008726.1 4496575 4497840 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3717 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(4496575..4497840) Mycobacterium vanbaalenii PYR-1 4648341 YP_954974.1 CDS Mvan_4191 NC_008726.1 4498210 4499046 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0711c hypothetical protein; short-chain dehydrogenase/reductase SDR complement(4498210..4499046) Mycobacterium vanbaalenii PYR-1 4648342 YP_954975.1 CDS Mvan_4192 NC_008726.1 4499121 4499645 R KEGG: mmc:Mmcs_3701 hypothetical protein; hypothetical protein complement(4499121..4499645) Mycobacterium vanbaalenii PYR-1 4648343 YP_954976.1 CDS Mvan_4193 NC_008726.1 4499807 4500409 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3703 transcriptional regulator, TetR family; TetR family transcriptional regulator 4499807..4500409 Mycobacterium vanbaalenii PYR-1 4648344 YP_954977.1 CDS Mvan_4194 NC_008726.1 4500496 4501101 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3722 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4500496..4501101) Mycobacterium vanbaalenii PYR-1 4648345 YP_954978.1 CDS Mvan_4195 NC_008726.1 4501163 4502404 D KEGG: mmc:Mmcs_3723 hypothetical protein; hypothetical protein 4501163..4502404 Mycobacterium vanbaalenii PYR-1 4648346 YP_954979.1 CDS Mvan_4196 NC_008726.1 4502391 4503212 D PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_3726 ATPase associated with various cellular activities, AAA_5; ATPase 4502391..4503212 Mycobacterium vanbaalenii PYR-1 4648347 YP_954980.1 CDS Mvan_4197 NC_008726.1 4503209 4504921 D PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_3727 von Willebrand factor, type A; von Willebrand factor, type A 4503209..4504921 Mycobacterium vanbaalenii PYR-1 4648348 YP_954981.1 CDS Mvan_4198 NC_008726.1 4504995 4505948 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein; luciferase family protein 4504995..4505948 Mycobacterium vanbaalenii PYR-1 4648349 YP_954982.1 CDS Mvan_4199 NC_008726.1 4506036 4506908 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3734 transcriptional regulator, TetR family; TetR family transcriptional regulator 4506036..4506908 Mycobacterium vanbaalenii PYR-1 4648350 YP_954983.1 CDS Mvan_4200 NC_008726.1 4506883 4508181 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3735 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4506883..4508181 Mycobacterium vanbaalenii PYR-1 4648351 YP_954984.1 CDS Mvan_4201 NC_008726.1 4508178 4509209 D PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_3736 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4508178..4509209 Mycobacterium vanbaalenii PYR-1 4648352 YP_954985.1 CDS Mvan_4202 NC_008726.1 4509217 4510182 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3737 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 4509217..4510182 Mycobacterium vanbaalenii PYR-1 4648353 YP_954986.1 CDS Mvan_4203 NC_008726.1 4510186 4510689 R KEGG: mmc:Mmcs_3738 hypothetical protein; hypothetical protein complement(4510186..4510689) Mycobacterium vanbaalenii PYR-1 4648354 YP_954987.1 CDS Mvan_4204 NC_008726.1 4510686 4511327 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3739 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4510686..4511327) Mycobacterium vanbaalenii PYR-1 4648355 YP_954988.1 CDS Mvan_4205 NC_008726.1 4511482 4512630 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3740 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4511482..4512630) Mycobacterium vanbaalenii PYR-1 4648356 YP_954989.1 CDS Mvan_4206 NC_008726.1 4512650 4513795 R KEGG: mpa:MAP0724 FadA6_2; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(4512650..4513795) Mycobacterium vanbaalenii PYR-1 4648357 YP_954990.1 CDS Mvan_4207 NC_008726.1 4513802 4514614 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02289 possible enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(4513802..4514614) Mycobacterium vanbaalenii PYR-1 4648358 YP_954991.1 CDS Mvan_4208 NC_008726.1 4514607 4515842 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3742 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(4514607..4515842) Mycobacterium vanbaalenii PYR-1 4648359 YP_954992.1 CDS Mvan_4209 NC_008726.1 4515847 4516605 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3743 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4515847..4516605) Mycobacterium vanbaalenii PYR-1 4645894 YP_954993.1 CDS Mvan_4210 NC_008726.1 4516605 4517804 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3744 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4516605..4517804) Mycobacterium vanbaalenii PYR-1 4645895 YP_954994.1 CDS Mvan_4211 NC_008726.1 4517905 4519248 R PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein; amidohydrolase 2 complement(4517905..4519248) Mycobacterium vanbaalenii PYR-1 4645896 YP_954995.1 CDS Mvan_4212 NC_008726.1 4519465 4519995 D PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3746 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4519465..4519995 Mycobacterium vanbaalenii PYR-1 4645897 YP_954996.1 CDS Mvan_4213 NC_008726.1 4520003 4521337 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3747 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 4520003..4521337 Mycobacterium vanbaalenii PYR-1 4645898 YP_954997.1 CDS Mvan_4214 NC_008726.1 4521330 4521683 D KEGG: mmc:Mmcs_3748 hypothetical protein; hypothetical protein 4521330..4521683 Mycobacterium vanbaalenii PYR-1 4645899 YP_954998.1 CDS Mvan_4215 NC_008726.1 4521687 4522925 D PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3749 amidohydrolase; amidohydrolase 4521687..4522925 Mycobacterium vanbaalenii PYR-1 4645900 YP_954999.1 CDS Mvan_4216 NC_008726.1 4522900 4523337 D KEGG: mmc:Mmcs_3750 hypothetical protein; hypothetical protein 4522900..4523337 Mycobacterium vanbaalenii PYR-1 4645901 YP_955000.1 CDS Mvan_4217 NC_008726.1 4523334 4524464 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3751 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4523334..4524464 Mycobacterium vanbaalenii PYR-1 4645902 YP_955001.1 CDS Mvan_4218 NC_008726.1 4524467 4525309 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3752 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4524467..4525309 Mycobacterium vanbaalenii PYR-1 4645903 YP_955002.1 CDS Mvan_4219 NC_008726.1 4525625 4526407 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(4525625..4526407) Mycobacterium vanbaalenii PYR-1 4645904 YP_955003.1 CDS Mvan_4220 NC_008726.1 4526558 4527277 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family; TetR family transcriptional regulator 4526558..4527277 Mycobacterium vanbaalenii PYR-1 4645905 YP_955004.1 CDS Mvan_4221 NC_008726.1 4527516 4528727 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_3834 cytochrome P450; cytochrome P450 4527516..4528727 Mycobacterium vanbaalenii PYR-1 4645906 YP_955005.1 CDS Mvan_4222 NC_008726.1 4528766 4529602 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3756 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4528766..4529602 Mycobacterium vanbaalenii PYR-1 4645907 YP_955006.1 CDS Mvan_4223 NC_008726.1 4529614 4530684 D SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_3833 protein of unknown function DUF227; hypothetical protein 4529614..4530684 Mycobacterium vanbaalenii PYR-1 4645908 YP_955007.1 CDS Mvan_4224 NC_008726.1 4530720 4532177 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3757 protein of unknown function UPF0089; hypothetical protein 4530720..4532177 Mycobacterium vanbaalenii PYR-1 4645909 YP_955008.1 CDS Mvan_4225 NC_008726.1 4532179 4533771 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(4532179..4533771) Mycobacterium vanbaalenii PYR-1 4645910 YP_955009.1 CDS Mvan_4226 NC_008726.1 4533777 4534613 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_3759 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4533777..4534613) Mycobacterium vanbaalenii PYR-1 4645911 YP_955010.1 CDS Mvan_4227 NC_008726.1 4534636 4535706 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_3760 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4534636..4535706 Mycobacterium vanbaalenii PYR-1 4645912 YP_955011.1 CDS Mvan_4228 NC_008726.1 4535710 4536516 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0709 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(4535710..4536516) Mycobacterium vanbaalenii PYR-1 4645913 YP_955012.1 CDS Mvan_4229 NC_008726.1 4536528 4539038 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3762 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(4536528..4539038) Mycobacterium vanbaalenii PYR-1 4645914 YP_955013.1 CDS Mvan_4230 NC_008726.1 4539046 4540029 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3763 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(4539046..4540029) Mycobacterium vanbaalenii PYR-1 4645915 YP_955014.1 CDS Mvan_4231 NC_008726.1 4540022 4541155 R PFAM: peptidase M24; KEGG: mmc:Mmcs_3764 peptidase M24; peptidase M24 complement(4540022..4541155) Mycobacterium vanbaalenii PYR-1 4645916 YP_955015.1 CDS Mvan_4232 NC_008726.1 4541145 4542413 R PFAM: peptidase M24; KEGG: mmc:Mmcs_3765 peptidase M24; peptidase M24 complement(4541145..4542413) Mycobacterium vanbaalenii PYR-1 4645917 YP_955016.1 CDS Mvan_4233 NC_008726.1 4542410 4543627 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2; amidohydrolase 2 complement(4542410..4543627) Mycobacterium vanbaalenii PYR-1 4645918 YP_955017.1 CDS Mvan_4234 NC_008726.1 4543660 4544889 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_3767 cytochrome P450; cytochrome P450 complement(4543660..4544889) Mycobacterium vanbaalenii PYR-1 4648942 YP_955018.1 CDS Mvan_4235 NC_008726.1 4544891 4545085 R KEGG: mmc:Mmcs_3768 putative ferredoxin; putative ferredoxin complement(4544891..4545085) Mycobacterium vanbaalenii PYR-1 4648943 YP_955019.1 CDS Mvan_4236 NC_008726.1 4545087 4545797 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3769 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4545087..4545797) Mycobacterium vanbaalenii PYR-1 4648944 YP_955020.1 CDS Mvan_4237 NC_008726.1 4545794 4546624 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3770 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4545794..4546624) Mycobacterium vanbaalenii PYR-1 4648945 YP_955021.1 CDS Mvan_4238 NC_008726.1 4546621 4547445 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3771 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4546621..4547445) Mycobacterium vanbaalenii PYR-1 4648946 YP_955022.1 CDS Mvan_4239 NC_008726.1 4547450 4548043 R PFAM: NADPH-dependent FMN reductase; KEGG: mmc:Mmcs_3780 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(4547450..4548043) Mycobacterium vanbaalenii PYR-1 4648947 YP_955023.1 CDS Mvan_4240 NC_008726.1 4548052 4549050 R KEGG: mmc:Mmcs_3781 hypothetical protein; hypothetical protein complement(4548052..4549050) Mycobacterium vanbaalenii PYR-1 4648948 YP_955024.1 CDS Mvan_4241 NC_008726.1 4549053 4549808 R catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase complement(4549053..4549808) Mycobacterium vanbaalenii PYR-1 4648949 YP_955025.1 CDS Mvan_4242 NC_008726.1 4549892 4551211 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_3783 luciferase-like protein; luciferase family protein complement(4549892..4551211) Mycobacterium vanbaalenii PYR-1 4648950 YP_955026.1 CDS Mvan_4243 NC_008726.1 4551218 4553023 R initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase complement(4551218..4553023) Mycobacterium vanbaalenii PYR-1 4648951 YP_955027.1 CDS mhpB NC_008726.1 4553020 4553940 R catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; 3-(2,3-dihydroxyphenyl)propionate dioxygenase complement(4553020..4553940) Mycobacterium vanbaalenii PYR-1 4648952 YP_955028.1 CDS mhpA NC_008726.1 4553888 4555597 R catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase complement(4553888..4555597) Mycobacterium vanbaalenii PYR-1 4648953 YP_955029.1 CDS Mvan_4246 NC_008726.1 4555594 4556460 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3787 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4555594..4556460) Mycobacterium vanbaalenii PYR-1 4648954 YP_955030.1 CDS Mvan_4247 NC_008726.1 4556615 4557349 D PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_3788 transcriptional regulator, IclR family; regulatory proteins IclR 4556615..4557349 Mycobacterium vanbaalenii PYR-1 4648955 YP_955031.1 CDS Mvan_4248 NC_008726.1 4557388 4559001 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3789 fumarate reductase/succinate dehydrogenase flavoprotein-like protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 4557388..4559001 Mycobacterium vanbaalenii PYR-1 4648956 YP_955032.1 CDS Mvan_4249 NC_008726.1 4559044 4559619 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3794 transcriptional regulator, TetR family; TetR family transcriptional regulator 4559044..4559619 Mycobacterium vanbaalenii PYR-1 4648957 YP_955033.1 CDS Mvan_4250 NC_008726.1 4559621 4560589 R KEGG: mmc:Mmcs_3795 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase complement(4559621..4560589) Mycobacterium vanbaalenii PYR-1 4648958 YP_955034.1 CDS Mvan_4251 NC_008726.1 4560601 4561365 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3797 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4560601..4561365 Mycobacterium vanbaalenii PYR-1 4648959 YP_955035.1 CDS Mvan_4252 NC_008726.1 4561373 4562113 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3798 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4561373..4562113 Mycobacterium vanbaalenii PYR-1 4648960 YP_955036.1 CDS Mvan_4253 NC_008726.1 4562497 4563261 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0683 hypothetical protein; enoyl-CoA hydratase/isomerase complement(4562497..4563261) Mycobacterium vanbaalenii PYR-1 4648961 YP_955037.1 CDS Mvan_4254 NC_008726.1 4563264 4564352 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3819 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4563264..4564352) Mycobacterium vanbaalenii PYR-1 4648962 YP_955038.1 CDS Mvan_4255 NC_008726.1 4564339 4565157 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3820 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4564339..4565157) Mycobacterium vanbaalenii PYR-1 4648963 YP_955039.1 CDS Mvan_4256 NC_008726.1 4565135 4566574 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3821 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4565135..4566574) Mycobacterium vanbaalenii PYR-1 4648964 YP_955040.1 CDS Mvan_4257 NC_008726.1 4566687 4567022 D PFAM: ferredoxin; KEGG: mmc:Mmcs_3822 ferredoxin; ferredoxin 4566687..4567022 Mycobacterium vanbaalenii PYR-1 4648965 YP_955041.1 CDS Mvan_4258 NC_008726.1 4567010 4568065 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3823 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(4567010..4568065) Mycobacterium vanbaalenii PYR-1 4648966 YP_955042.1 CDS Mvan_4259 NC_008726.1 4568190 4569146 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein; luciferase family protein complement(4568190..4569146) Mycobacterium vanbaalenii PYR-1 4648967 YP_955043.1 CDS Mvan_4260 NC_008726.1 4569143 4569544 R PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_3825 methylmalonyl-CoA mutase C-terminal domain protein; cobalamin B12-binding domain-containing protein complement(4569143..4569544) Mycobacterium vanbaalenii PYR-1 4648310 YP_955044.1 CDS Mvan_4261 NC_008726.1 4569547 4571136 R KEGG: mmc:Mmcs_3826 methylmalonyl-CoA mutase N-terminal domain protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit complement(4569547..4571136) Mycobacterium vanbaalenii PYR-1 4648311 YP_955045.1 CDS Mvan_4262 NC_008726.1 4571310 4572179 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3827 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 4571310..4572179 Mycobacterium vanbaalenii PYR-1 4648312 YP_955046.1 CDS Mvan_4263 NC_008726.1 4572176 4573684 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3828 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4572176..4573684 Mycobacterium vanbaalenii PYR-1 4648313 YP_955047.1 CDS Mvan_4264 NC_008726.1 4573725 4574027 D KEGG: mmc:Mmcs_3829 hypothetical protein; hypothetical protein 4573725..4574027 Mycobacterium vanbaalenii PYR-1 4648314 YP_955048.1 CDS Mvan_4265 NC_008726.1 4574072 4575538 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_3830 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 4574072..4575538 Mycobacterium vanbaalenii PYR-1 4648315 YP_955049.1 CDS Mvan_4266 NC_008726.1 4575594 4576901 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3831 general substrate transporter; general substrate transporter 4575594..4576901 Mycobacterium vanbaalenii PYR-1 4648316 YP_955050.1 CDS Mvan_4267 NC_008726.1 4576898 4577299 R KEGG: mmc:Mmcs_0043 hypothetical protein; hypothetical protein complement(4576898..4577299) Mycobacterium vanbaalenii PYR-1 4648317 YP_955051.1 CDS Mvan_4268 NC_008726.1 4577389 4577811 R PFAM: protein of unknown function DUF35; KEGG: mpa:MAP4301c hypothetical protein; hypothetical protein complement(4577389..4577811) Mycobacterium vanbaalenii PYR-1 4648318 YP_955052.1 CDS Mvan_4269 NC_008726.1 4577814 4579022 R KEGG: mmc:Mmcs_0041 hypothetical protein; hypothetical protein complement(4577814..4579022) Mycobacterium vanbaalenii PYR-1 4648319 YP_955053.1 CDS Mvan_4270 NC_008726.1 4579058 4581280 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0040 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4579058..4581280) Mycobacterium vanbaalenii PYR-1 4648320 YP_955054.1 CDS Mvan_4271 NC_008726.1 4581277 4582290 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_0039 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4581277..4582290) Mycobacterium vanbaalenii PYR-1 4648321 YP_955055.1 CDS Mvan_4272 NC_008726.1 4582401 4582976 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP4304 hypothetical protein; TetR family transcriptional regulator 4582401..4582976 Mycobacterium vanbaalenii PYR-1 4648322 YP_955056.1 CDS Mvan_4273 NC_008726.1 4582988 4583449 D PFAM: cyclase/dehydrase; KEGG: mbo:Mb3103 hypothetical protein; cyclase/dehydrase 4582988..4583449 Mycobacterium vanbaalenii PYR-1 4648323 YP_955057.1 CDS Mvan_4274 NC_008726.1 4583446 4585269 D PFAM: sulfatase; KEGG: mbo:Mb3104 possible hydrolase; sulfatase 4583446..4585269 Mycobacterium vanbaalenii PYR-1 4648324 YP_955058.1 CDS Mvan_4275 NC_008726.1 4585296 4586561 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2699 amidohydrolase 2; amidohydrolase 2 complement(4585296..4586561) Mycobacterium vanbaalenii PYR-1 4648325 YP_955059.1 CDS Mvan_4276 NC_008726.1 4586586 4587449 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_2700 transcriptional regulator, AraC family; AraC family transcriptional regulator 4586586..4587449 Mycobacterium vanbaalenii PYR-1 4648326 YP_955060.1 CDS Mvan_4277 NC_008726.1 4587455 4588081 R PFAM: regulatory protein, TetR; KEGG: mpa:MAP1349c hypothetical protein; TetR family transcriptional regulator complement(4587455..4588081) Mycobacterium vanbaalenii PYR-1 4648327 YP_955061.1 CDS Mvan_4278 NC_008726.1 4588157 4588465 D PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_0057 transcription factor WhiB; transcription factor WhiB 4588157..4588465 Mycobacterium vanbaalenii PYR-1 4648328 YP_955062.1 CDS Mvan_4279 NC_008726.1 4588471 4589343 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0403 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4588471..4589343) Mycobacterium vanbaalenii PYR-1 4648329 YP_955063.1 CDS Mvan_4280 NC_008726.1 4589543 4589794 D KEGG: mmc:Mmcs_5178 hypothetical protein; hypothetical protein 4589543..4589794 Mycobacterium vanbaalenii PYR-1 4648330 YP_955064.1 CDS Mvan_4281 NC_008726.1 4589804 4590787 R KEGG: mtc:MT0636 hypothetical protein; hypothetical protein complement(4589804..4590787) Mycobacterium vanbaalenii PYR-1 4648331 YP_955065.1 CDS Mvan_4282 NC_008726.1 4591095 4591874 D KEGG: mmc:Mmcs_3839 hypothetical protein; hypothetical protein 4591095..4591874 Mycobacterium vanbaalenii PYR-1 4648333 YP_955066.1 CDS Mvan_4283 NC_008726.1 4591855 4592280 D KEGG: mmc:Mmcs_3840 lipoprotein, putative; putative lipoprotein 4591855..4592280 Mycobacterium vanbaalenii PYR-1 4648385 YP_955067.1 CDS Mvan_4284 NC_008726.1 4592277 4592621 D KEGG: mbo:Mb1377c hypothetical protein; hypothetical protein 4592277..4592621 Mycobacterium vanbaalenii PYR-1 4648386 YP_955068.1 CDS Mvan_4285 NC_008726.1 4592663 4593928 D PFAM: acyltransferase 3; KEGG: mmc:Mmcs_1222 acyltransferase 3; acyltransferase 3 4592663..4593928 Mycobacterium vanbaalenii PYR-1 4648387 YP_955069.1 CDS Mvan_4286 NC_008726.1 4593796 4594347 R TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: mmc:Mmcs_3843 Ham1-like protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase complement(4593796..4594347) Mycobacterium vanbaalenii PYR-1 4648388 YP_955070.1 CDS rph NC_008726.1 4594410 4595192 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(4594410..4595192) Mycobacterium vanbaalenii PYR-1 4648389 YP_955071.1 CDS Mvan_4288 NC_008726.1 4595252 4596025 R KEGG: mmc:Mmcs_3845 beta-lactamase-like protein; beta-lactamase-like protein complement(4595252..4596025) Mycobacterium vanbaalenii PYR-1 4648390 YP_955072.1 CDS Mvan_4289 NC_008726.1 4596084 4596929 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(4596084..4596929) Mycobacterium vanbaalenii PYR-1 4648391 YP_955073.1 CDS Mvan_4290 NC_008726.1 4596926 4597603 R PFAM: Rhomboid family protein; KEGG: mmc:Mmcs_3847 rhomboid-like protein; rhomboid family protein complement(4596926..4597603) Mycobacterium vanbaalenii PYR-1 4648392 YP_955074.1 CDS Mvan_4291 NC_008726.1 4597600 4598562 R KEGG: mmc:Mmcs_3848 cysteine synthases; TIGRFAM: cysteine synthases; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase complement(4597600..4598562) Mycobacterium vanbaalenii PYR-1 4648393 YP_955075.1 CDS Mvan_4292 NC_008726.1 4598573 4598845 R PFAM: thiamineS protein; KEGG: mmc:Mmcs_3849 thiamineS; hypothetical protein complement(4598573..4598845) Mycobacterium vanbaalenii PYR-1 4648394 YP_955076.1 CDS Mvan_4293 NC_008726.1 4598868 4599281 R PFAM: Mov34/MPN/PAD-1 family protein; KEGG: nfa:nfa10890 hypothetical protein; Mov34/MPN/PAD-1 family protein complement(4598868..4599281) Mycobacterium vanbaalenii PYR-1 4648395 YP_955077.1 CDS Mvan_4294 NC_008726.1 4599295 4600317 R PFAM: peptidase S58, DmpA; KEGG: mmc:Mmcs_3851 peptidase S58, DmpA; peptidase S58, DmpA complement(4599295..4600317) Mycobacterium vanbaalenii PYR-1 4648396 YP_955078.1 CDS Mvan_4295 NC_008726.1 4600314 4600898 R KEGG: mmc:Mmcs_3852 hypothetical protein; hypothetical protein complement(4600314..4600898) Mycobacterium vanbaalenii PYR-1 4648397 YP_955079.1 CDS clpS NC_008726.1 4600906 4601208 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(4600906..4601208) Mycobacterium vanbaalenii PYR-1 4648398 YP_955080.1 CDS Mvan_4297 NC_008726.1 4601273 4602637 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 4601273..4602637 Mycobacterium vanbaalenii PYR-1 4648399 YP_955081.1 CDS Mvan_4298 NC_008726.1 4602644 4604644 D PFAM: DEAD/DEAH box helicase domain protein; SMART: helicase c2; DEAD-like helicases-like; KEGG: mmc:Mmcs_3855 helicase C2; DEAD/DEAH box helicase 4602644..4604644 Mycobacterium vanbaalenii PYR-1 4648400 YP_955082.1 CDS Mvan_4299 NC_008726.1 4604754 4606211 D KEGG: mmc:Mmcs_3856 LpqM; LpqM 4604754..4606211 Mycobacterium vanbaalenii PYR-1 4648401 YP_955083.1 CDS Mvan_4300 NC_008726.1 4606230 4608875 R KEGG: mmc:Mmcs_3859 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; alpha-glucan phosphorylase complement(4606230..4608875) Mycobacterium vanbaalenii PYR-1 4648402 YP_955084.1 CDS Mvan_4301 NC_008726.1 4609098 4611188 D PFAM: alpha amylase, catalytic region; KEGG: mmc:Mmcs_3860 alpha amylase, catalytic region; alpha amylase 4609098..4611188 Mycobacterium vanbaalenii PYR-1 4648403 YP_955085.1 CDS Mvan_4302 NC_008726.1 4611193 4613406 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 4611193..4613406 Mycobacterium vanbaalenii PYR-1 4648404 YP_955086.1 CDS Mvan_4303 NC_008726.1 4613517 4614410 R PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_3862 thioredoxin domain protein; thioredoxin domain-containing protein complement(4613517..4614410) Mycobacterium vanbaalenii PYR-1 4648405 YP_955087.1 CDS Mvan_4304 NC_008726.1 4614424 4614807 R KEGG: mmc:Mmcs_3863 hypothetical protein; hypothetical protein complement(4614424..4614807) Mycobacterium vanbaalenii PYR-1 4648406 YP_955088.1 CDS Mvan_4305 NC_008726.1 4614861 4616054 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(4614861..4616054) Mycobacterium vanbaalenii PYR-1 4648407 YP_955089.1 CDS Mvan_4306 NC_008726.1 4616148 4616633 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3865 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4616148..4616633 Mycobacterium vanbaalenii PYR-1 4648408 YP_955090.1 CDS Mvan_4307 NC_008726.1 4616630 4616923 R KEGG: mpa:MAP2438c hypothetical protein; hypothetical protein complement(4616630..4616923) Mycobacterium vanbaalenii PYR-1 4648409 YP_955091.1 CDS Mvan_4308 NC_008726.1 4616923 4617594 R PFAM: protein of unknown function DUF91; KEGG: mpa:MAP2439c hypothetical protein; hypothetical protein complement(4616923..4617594) Mycobacterium vanbaalenii PYR-1 4648410 YP_955092.1 CDS Mvan_4309 NC_008726.1 4617640 4619250 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_3868 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 4617640..4619250 Mycobacterium vanbaalenii PYR-1 4644109 YP_955093.1 CDS Mvan_4310 NC_008726.1 4619247 4619642 R KEGG: tfu:Tfu_1485 hypothetical protein; hypothetical protein complement(4619247..4619642) Mycobacterium vanbaalenii PYR-1 4644110 YP_955094.1 CDS Mvan_4311 NC_008726.1 4619663 4620832 R KEGG: tfu:Tfu_1484 hypothetical protein; hypothetical protein complement(4619663..4620832) Mycobacterium vanbaalenii PYR-1 4644111 YP_955095.1 CDS Mvan_4312 NC_008726.1 4621049 4622143 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5275 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4621049..4622143 Mycobacterium vanbaalenii PYR-1 4644112 YP_955096.1 CDS Mvan_4313 NC_008726.1 4622145 4623338 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5276 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4622145..4623338 Mycobacterium vanbaalenii PYR-1 4644113 YP_955097.1 CDS Mvan_4314 NC_008726.1 4623344 4625716 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_5277 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4623344..4625716 Mycobacterium vanbaalenii PYR-1 4644114 YP_955098.1 CDS Mvan_4315 NC_008726.1 4625780 4626712 D PFAM: regulatory protein, LysR; KEGG: mmc:Mmcs_5278 transcriptional regulator, LysR family; LysR family transcriptional regulator 4625780..4626712 Mycobacterium vanbaalenii PYR-1 4644115 YP_955099.1 CDS Mvan_4316 NC_008726.1 4626721 4627410 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3746 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(4626721..4627410) Mycobacterium vanbaalenii PYR-1 4644116 YP_955100.1 CDS Mvan_4317 NC_008726.1 4627425 4628705 R PFAM: cytochrome P450; KEGG: mpa:MAP0727 hypothetical protein; cytochrome P450 complement(4627425..4628705) Mycobacterium vanbaalenii PYR-1 4644117 YP_955101.1 CDS Mvan_4318 NC_008726.1 4628702 4629166 R KEGG: mmc:Mmcs_3700 hypothetical protein; hypothetical protein complement(4628702..4629166) Mycobacterium vanbaalenii PYR-1 4644118 YP_955102.1 CDS Mvan_4319 NC_008726.1 4629181 4630590 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3702 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(4629181..4630590) Mycobacterium vanbaalenii PYR-1 4644119 YP_955103.1 CDS Mvan_4320 NC_008726.1 4630789 4631295 D KEGG: mmc:Mmcs_2036 hypothetical protein; hypothetical protein 4630789..4631295 Mycobacterium vanbaalenii PYR-1 4644120 YP_955104.1 CDS Mvan_4321 NC_008726.1 4631300 4631899 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3703 transcriptional regulator, TetR family; TetR family transcriptional regulator 4631300..4631899 Mycobacterium vanbaalenii PYR-1 4644121 YP_955105.1 CDS Mvan_4322 NC_008726.1 4631984 4633471 D PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: mtc:MT1358 regulatory protein Ada, putative; alcohol dehydrogenase 4631984..4633471 Mycobacterium vanbaalenii PYR-1 4644122 YP_955106.1 CDS Mvan_4323 NC_008726.1 4633471 4633974 D KEGG: mmc:Mmcs_3871 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 4633471..4633974 Mycobacterium vanbaalenii PYR-1 4644123 YP_955107.1 CDS Mvan_4324 NC_008726.1 4639671 4640924 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4639671..4640924) Mycobacterium vanbaalenii PYR-1 4644127 YP_955108.1 CDS Mvan_4325 NC_008726.1 4641007 4641582 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mmc:Mmcs_3873 cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 4641007..4641582 Mycobacterium vanbaalenii PYR-1 4644128 YP_955109.1 CDS Mvan_4326 NC_008726.1 4641628 4642053 R KEGG: mmc:Mmcs_3874 hypothetical protein; hypothetical protein complement(4641628..4642053) Mycobacterium vanbaalenii PYR-1 4644129 YP_955110.1 CDS atpC NC_008726.1 4642081 4642446 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(4642081..4642446) Mycobacterium vanbaalenii PYR-1 4644130 YP_955111.1 CDS Mvan_4328 NC_008726.1 4642609 4644036 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(4642609..4644036) Mycobacterium vanbaalenii PYR-1 4644131 YP_955112.1 CDS Mvan_4329 NC_008726.1 4644062 4644991 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(4644062..4644991) Mycobacterium vanbaalenii PYR-1 4647324 YP_955113.1 CDS Mvan_4330 NC_008726.1 4645016 4646662 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(4645016..4646662) Mycobacterium vanbaalenii PYR-1 4647325 YP_955114.1 CDS Mvan_4331 NC_008726.1 4646714 4648051 R produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(4646714..4648051) Mycobacterium vanbaalenii PYR-1 4647326 YP_955115.1 CDS Mvan_4332 NC_008726.1 4648052 4648552 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(4648052..4648552) Mycobacterium vanbaalenii PYR-1 4647327 YP_955116.1 CDS Mvan_4333 NC_008726.1 4648562 4648822 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(4648562..4648822) Mycobacterium vanbaalenii PYR-1 4647328 YP_955117.1 CDS Mvan_4334 NC_008726.1 4648903 4649673 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(4648903..4649673) Mycobacterium vanbaalenii PYR-1 4647329 YP_955118.1 CDS Mvan_4335 NC_008726.1 4649722 4650168 R KEGG: mpa:MAP2458c hypothetical protein; hypothetical protein complement(4649722..4650168) Mycobacterium vanbaalenii PYR-1 4647330 YP_955119.1 CDS Mvan_4336 NC_008726.1 4650449 4651666 R PFAM: glycosyl transferase, family 4; KEGG: mmc:Mmcs_3884 glycosyl transferase, family 4; glycosyl transferase family protein complement(4650449..4651666) Mycobacterium vanbaalenii PYR-1 4647331 YP_955120.1 CDS Mvan_4337 NC_008726.1 4651678 4652340 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: mmc:Mmcs_3885 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein complement(4651678..4652340) Mycobacterium vanbaalenii PYR-1 4647332 YP_955121.1 CDS Mvan_4338 NC_008726.1 4652354 4653172 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: mmc:Mmcs_3886 modification methylase, HemK family; HemK family modification methylase complement(4652354..4653172) Mycobacterium vanbaalenii PYR-1 4647333 YP_955122.1 CDS prfA NC_008726.1 4653205 4654278 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(4653205..4654278) Mycobacterium vanbaalenii PYR-1 4647334 YP_955123.1 CDS rpmE NC_008726.1 4654373 4654597 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(4654373..4654597) Mycobacterium vanbaalenii PYR-1 4647335 YP_955124.1 CDS Mvan_4341 NC_008726.1 4654733 4656313 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(4654733..4656313) Mycobacterium vanbaalenii PYR-1 4647336 YP_955125.1 CDS Mvan_4342 NC_008726.1 4656416 4657072 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3892 transcriptional regulator, TetR family; TetR family transcriptional regulator 4656416..4657072 Mycobacterium vanbaalenii PYR-1 4647337 YP_955126.1 CDS Mvan_4343 NC_008726.1 4657118 4657696 R KEGG: mmc:Mmcs_3889 hypothetical protein; hypothetical protein complement(4657118..4657696) Mycobacterium vanbaalenii PYR-1 4647338 YP_955127.1 CDS Mvan_4344 NC_008726.1 4657769 4658203 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_3890 transcriptional regulator, MarR family; MarR family transcriptional regulator 4657769..4658203 Mycobacterium vanbaalenii PYR-1 4647339 YP_955128.1 CDS Mvan_4345 NC_008726.1 4658253 4660307 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4658253..4660307) Mycobacterium vanbaalenii PYR-1 4647340 YP_955129.1 CDS Mvan_4346 NC_008726.1 4660605 4661549 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(4660605..4661549) Mycobacterium vanbaalenii PYR-1 4647341 YP_955130.1 CDS Mvan_4347 NC_008726.1 4661561 4662640 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(4661561..4662640) Mycobacterium vanbaalenii PYR-1 4647342 YP_955131.1 CDS Mvan_4348 NC_008726.1 4662637 4663953 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(4662637..4663953) Mycobacterium vanbaalenii PYR-1 4647343 YP_955132.1 CDS Mvan_4349 NC_008726.1 4663950 4665380 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mmc:Mmcs_3897 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(4663950..4665380) Mycobacterium vanbaalenii PYR-1 4647344 YP_955133.1 CDS argS NC_008726.1 4665377 4667029 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(4665377..4667029) Mycobacterium vanbaalenii PYR-1 4647345 YP_955134.1 CDS Mvan_4351 NC_008726.1 4667540 4667794 D hypothetical protein 4667540..4667794 Mycobacterium vanbaalenii PYR-1 4647347 YP_955135.1 CDS Mvan_4352 NC_008726.1 4667794 4668486 D hypothetical protein 4667794..4668486 Mycobacterium vanbaalenii PYR-1 4647348 YP_955136.1 CDS Mvan_4353 NC_008726.1 4668924 4669253 R hypothetical protein complement(4668924..4669253) Mycobacterium vanbaalenii PYR-1 4649373 YP_955137.1 CDS Mvan_4354 NC_008726.1 4669220 4669588 R hypothetical protein complement(4669220..4669588) Mycobacterium vanbaalenii PYR-1 4649374 YP_955138.1 CDS Mvan_4355 NC_008726.1 4669913 4670521 D PFAM: protein of unknown function DUF433; KEGG: cef:CE0818 hypothetical protein; hypothetical protein 4669913..4670521 Mycobacterium vanbaalenii PYR-1 4649375 YP_955139.1 CDS Mvan_4356 NC_008726.1 4670518 4670937 D hypothetical protein 4670518..4670937 Mycobacterium vanbaalenii PYR-1 4649376 YP_955140.1 CDS Mvan_4357 NC_008726.1 4671111 4671452 R hypothetical protein complement(4671111..4671452) Mycobacterium vanbaalenii PYR-1 4649377 YP_955141.1 CDS Mvan_4358 NC_008726.1 4672009 4672368 R KEGG: mmc:Mmcs_4160 hypothetical protein; hypothetical protein complement(4672009..4672368) Mycobacterium vanbaalenii PYR-1 4649378 YP_955142.1 CDS Mvan_4359 NC_008726.1 4672480 4672824 R hypothetical protein complement(4672480..4672824) Mycobacterium vanbaalenii PYR-1 4649379 YP_955143.1 CDS Mvan_4360 NC_008726.1 4672850 4676470 R KEGG: mac:MA3805 hypothetical protein; Phage-related minor tail protein-like complement(4672850..4676470) Mycobacterium vanbaalenii PYR-1 4649380 YP_955144.1 CDS Mvan_4361 NC_008726.1 4676582 4677751 R PFAM: phage major capsid protein, HK97; KEGG: mbo:Mb1602c probable phiRV1 phage protein; phage major capsid protein, HK97 complement(4676582..4677751) Mycobacterium vanbaalenii PYR-1 4649381 YP_955145.1 CDS Mvan_4362 NC_008726.1 4678364 4678660 R hypothetical protein complement(4678364..4678660) Mycobacterium vanbaalenii PYR-1 4649382 YP_955146.1 CDS Mvan_4363 NC_008726.1 4678657 4679109 R KEGG: nfa:nfa170 hypothetical protein; hypothetical protein complement(4678657..4679109) Mycobacterium vanbaalenii PYR-1 4649383 YP_955147.1 CDS Mvan_4364 NC_008726.1 4680971 4682092 R PFAM: phage integrase family protein; KEGG: mtc:MT2735 integrase; phage integrase family protein complement(4680971..4682092) Mycobacterium vanbaalenii PYR-1 4649384 YP_955148.1 CDS Mvan_4365 NC_008726.1 4684270 4684557 R hypothetical protein complement(4684270..4684557) Mycobacterium vanbaalenii PYR-1 4649385 YP_955149.1 CDS Mvan_4366 NC_008726.1 4684914 4685876 R hypothetical protein complement(4684914..4685876) Mycobacterium vanbaalenii PYR-1 4649386 YP_955150.1 CDS Mvan_4367 NC_008726.1 4686771 4687433 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: hch:HCH_01885 predicted flavin-nucleotide-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(4686771..4687433) Mycobacterium vanbaalenii PYR-1 4649387 YP_955151.1 CDS Mvan_4368 NC_008726.1 4687516 4688148 R KEGG: plt:Plut_0837 hypothetical protein; hypothetical protein complement(4687516..4688148) Mycobacterium vanbaalenii PYR-1 4649388 YP_955152.1 CDS Mvan_4369 NC_008726.1 4688345 4689247 D hypothetical protein 4688345..4689247 Mycobacterium vanbaalenii PYR-1 4649389 YP_955153.1 CDS Mvan_4370 NC_008726.1 4689264 4690445 R KEGG: sal:Sala_2007 peptidase S9, prolyl oligopeptidase active site region; hypothetical protein complement(4689264..4690445) Mycobacterium vanbaalenii PYR-1 4649390 YP_955154.1 CDS Mvan_4372 NC_008726.1 4691098 4691472 D hypothetical protein 4691098..4691472 Mycobacterium vanbaalenii PYR-1 4649392 YP_955155.1 CDS Mvan_4373 NC_008726.1 4691515 4693992 R KEGG: mmc:Mmcs_2677 hypothetical protein; hypothetical protein complement(4691515..4693992) Mycobacterium vanbaalenii PYR-1 4649393 YP_955156.1 CDS Mvan_4374 NC_008726.1 4694030 4694797 R KEGG: mmc:Mmcs_2678 hypothetical protein; hypothetical protein complement(4694030..4694797) Mycobacterium vanbaalenii PYR-1 4649394 YP_955157.1 CDS Mvan_4375 NC_008726.1 4695118 4696347 D KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 4695118..4696347 Mycobacterium vanbaalenii PYR-1 4649395 YP_955158.1 CDS Mvan_4376 NC_008726.1 4696251 4697192 R PFAM: Lytic transglycosylase, catalytic; KEGG: mmc:Mmcs_3420 protein of unknown function DUF1460; lytic transglycosylase catalytic subunit complement(4696251..4697192) Mycobacterium vanbaalenii PYR-1 4649396 YP_955159.1 CDS Mvan_4377 NC_008726.1 4697275 4698051 D PFAM: protein of unknown function DUF1460; KEGG: mmc:Mmcs_3420 protein of unknown function DUF1460; hypothetical protein 4697275..4698051 Mycobacterium vanbaalenii PYR-1 4649397 YP_955160.1 CDS Mvan_4378 NC_008726.1 4698056 4698946 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3013c hypothetical protein; short-chain dehydrogenase/reductase SDR complement(4698056..4698946) Mycobacterium vanbaalenii PYR-1 4648717 YP_955161.1 CDS Mvan_4379 NC_008726.1 4699166 4700323 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5118 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4699166..4700323 Mycobacterium vanbaalenii PYR-1 4648718 YP_955162.1 CDS Mvan_4380 NC_008726.1 4700332 4701447 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5119 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4700332..4701447 Mycobacterium vanbaalenii PYR-1 4648719 YP_955163.1 CDS Mvan_4381 NC_008726.1 4701933 4703054 D KEGG: mmc:Mmcs_4038 hypothetical protein; hypothetical protein 4701933..4703054 Mycobacterium vanbaalenii PYR-1 4648720 YP_955164.1 CDS Mvan_4382 NC_008726.1 4702957 4703631 R PFAM: protein of unknown function DUF899, thioredoxin family protein; KEGG: mmc:Mmcs_3906 protein of unknown function DUF899, thioredoxin-like protein; hypothetical protein complement(4702957..4703631) Mycobacterium vanbaalenii PYR-1 4648721 YP_955165.1 CDS Mvan_4383 NC_008726.1 4703654 4704529 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_3907 luciferase-like protein; luciferase family protein complement(4703654..4704529) Mycobacterium vanbaalenii PYR-1 4648722 YP_955166.1 CDS Mvan_4384 NC_008726.1 4704582 4705706 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cps:CPS_3436 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(4704582..4705706) Mycobacterium vanbaalenii PYR-1 4648723 YP_955167.1 CDS Mvan_4385 NC_008726.1 4705868 4707205 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_3908 putative signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4705868..4707205 Mycobacterium vanbaalenii PYR-1 4648724 YP_955168.1 CDS Mvan_4386 NC_008726.1 4707202 4707831 D PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_3909 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4707202..4707831 Mycobacterium vanbaalenii PYR-1 4648725 YP_955169.1 CDS Mvan_4387 NC_008726.1 4707850 4708743 D KEGG: mmc:Mmcs_3910 hypothetical protein; hypothetical protein 4707850..4708743 Mycobacterium vanbaalenii PYR-1 4648726 YP_955170.1 CDS Mvan_4388 NC_008726.1 4708740 4710077 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sil:SPO3597 amine oxidase, flavin-containing; amine oxidase complement(4708740..4710077) Mycobacterium vanbaalenii PYR-1 4648727 YP_955171.1 CDS Mvan_4389 NC_008726.1 4710077 4711099 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mbo:Mb2804c possible alanine rich oxidoreductase; 2-nitropropane dioxygenase complement(4710077..4711099) Mycobacterium vanbaalenii PYR-1 4648728 YP_955172.1 CDS Mvan_4390 NC_008726.1 4711173 4711580 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3912 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4711173..4711580 Mycobacterium vanbaalenii PYR-1 4648729 YP_955173.1 CDS Mvan_4391 NC_008726.1 4711648 4712661 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(4711648..4712661) Mycobacterium vanbaalenii PYR-1 4648730 YP_955174.1 CDS Mvan_4392 NC_008726.1 4712658 4713614 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(4712658..4713614) Mycobacterium vanbaalenii PYR-1 4648731 YP_955175.1 CDS Mvan_4393 NC_008726.1 4713611 4714462 R PFAM: Hydratase/decarboxylase; KEGG: nfa:nfa33180 putative hydratase; hydratase/decarboxylase complement(4713611..4714462) Mycobacterium vanbaalenii PYR-1 4648732 YP_955176.1 CDS Mvan_4394 NC_008726.1 4714568 4716019 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry; virulence factor Mce family protein complement(4714568..4716019) Mycobacterium vanbaalenii PYR-1 4648733 YP_955177.1 CDS Mvan_4395 NC_008726.1 4716020 4717150 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1528 mammalian cell entry; virulence factor Mce family protein complement(4716020..4717150) Mycobacterium vanbaalenii PYR-1 4648734 YP_955178.1 CDS Mvan_4396 NC_008726.1 4717147 4718466 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2021 virulence factor mce family protein; virulence factor Mce family protein complement(4717147..4718466) Mycobacterium vanbaalenii PYR-1 4648735 YP_955179.1 CDS Mvan_4397 NC_008726.1 4718463 4719755 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1656 mammalian cell entry; virulence factor Mce family protein complement(4718463..4719755) Mycobacterium vanbaalenii PYR-1 4648736 YP_955180.1 CDS Mvan_4398 NC_008726.1 4719752 4720780 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2019 virulence factor mce family protein; virulence factor Mce family protein complement(4719752..4720780) Mycobacterium vanbaalenii PYR-1 4648737 YP_955181.1 CDS Mvan_4399 NC_008726.1 4720811 4722223 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1524 mammalian cell entry; virulence factor Mce family protein complement(4720811..4722223) Mycobacterium vanbaalenii PYR-1 4648738 YP_955182.1 CDS Mvan_4400 NC_008726.1 4722227 4723072 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1523 protein of unknown function DUF140; hypothetical protein complement(4722227..4723072) Mycobacterium vanbaalenii PYR-1 4648739 YP_955183.1 CDS Mvan_4401 NC_008726.1 4723069 4723821 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140; hypothetical protein complement(4723069..4723821) Mycobacterium vanbaalenii PYR-1 4648740 YP_955184.1 CDS Mvan_4402 NC_008726.1 4724007 4724690 R TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: mmc:Mmcs_1703 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase subunit B complement(4724007..4724690) Mycobacterium vanbaalenii PYR-1 4648741 YP_955185.1 CDS Mvan_4403 NC_008726.1 4724687 4725385 R KEGG: mmc:Mmcs_1702 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(4724687..4725385) Mycobacterium vanbaalenii PYR-1 4648994 YP_955186.1 CDS Mvan_4404 NC_008726.1 4725389 4726282 R PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase, N-terminal domain protein; KEGG: cgb:cg3385 catechol 1,2-dioxygenase; intradiol ring-cleavage dioxygenase complement(4725389..4726282) Mycobacterium vanbaalenii PYR-1 4648995 YP_955187.1 CDS Mvan_4405 NC_008726.1 4726279 4727334 R PFAM: iron-containing alcohol dehydrogenase; KEGG: cgb:cg3386 maleylacetate reductasetase; iron-containing alcohol dehydrogenase complement(4726279..4727334) Mycobacterium vanbaalenii PYR-1 4648996 YP_955188.1 CDS Mvan_4406 NC_008726.1 4727334 4729127 R PFAM: monooxygenase, FAD-binding; KEGG: cef:CE2219 putative phenol 2-monooxygenase; FAD-binding monooxygenase complement(4727334..4729127) Mycobacterium vanbaalenii PYR-1 4648997 YP_955189.1 CDS Mvan_4407 NC_008726.1 4729356 4731044 R PFAM: GAF domain protein; KEGG: tfu:Tfu_0080 GAF domain protein; putative GAF sensor protein complement(4729356..4731044) Mycobacterium vanbaalenii PYR-1 4648998 YP_955190.1 CDS Mvan_4408 NC_008726.1 4731113 4732804 D PFAM: AMP-dependent synthetase and ligase; KEGG: bbr:BB0455 putative substrate-CoA ligase; AMP-dependent synthetase and ligase 4731113..4732804 Mycobacterium vanbaalenii PYR-1 4648999 YP_955191.1 CDS Mvan_4409 NC_008726.1 4732794 4734011 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: bha:BH1998 hypothetical protein; FAD-binding monooxygenase 4732794..4734011 Mycobacterium vanbaalenii PYR-1 4649000 YP_955192.1 CDS Mvan_4410 NC_008726.1 4734051 4734524 D PFAM: MaoC domain protein dehydratase; KEGG: mbo:Mb0135 hypothetical protein; dehydratase 4734051..4734524 Mycobacterium vanbaalenii PYR-1 4649001 YP_955193.1 CDS Mvan_4411 NC_008726.1 4734561 4735364 D PFAM: regulatory proteins, IclR; KEGG: nfa:nfa22460 putative transcriptional regulator; regulatory proteins IclR 4734561..4735364 Mycobacterium vanbaalenii PYR-1 4649002 YP_955194.1 CDS Mvan_4412 NC_008726.1 4735384 4736214 R Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase complement(4735384..4736214) Mycobacterium vanbaalenii PYR-1 4649003 YP_955195.1 CDS Mvan_4413 NC_008726.1 4736232 4737128 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C1191 2,3-dihydroxybiphenyl-1,2-dioxygenase (BphC); glyoxalase/bleomycin resistance protein/dioxygenase complement(4736232..4737128) Mycobacterium vanbaalenii PYR-1 4649004 YP_955196.1 CDS Mvan_4414 NC_008726.1 4737184 4738017 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_C1186 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BphD); alpha/beta hydrolase fold protein complement(4737184..4738017) Mycobacterium vanbaalenii PYR-1 4649005 YP_955197.1 CDS Mvan_4415 NC_008726.1 4738281 4739621 D PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: sfx:S2757 large terminal subunit of phenylpropionate dioxygenase; ring hydroxylating dioxygenase subunit alpha 4738281..4739621 Mycobacterium vanbaalenii PYR-1 4649006 YP_955198.1 CDS Mvan_4416 NC_008726.1 4739618 4740181 D PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bxe:Bxe_C1196 biphenyl 2,3-dioxygenase small subunit (BphA2); benzene 1,2-dioxygenase 4739618..4740181 Mycobacterium vanbaalenii PYR-1 4649007 YP_955199.1 CDS Mvan_4417 NC_008726.1 4740178 4740561 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: plu:plu2206 3-phenylpropionate dioxygenase ferredoxin subunit (digoxigenin ferredoxin subunit); Rieske (2Fe-2S) domain-containing protein 4740178..4740561 Mycobacterium vanbaalenii PYR-1 4649008 YP_955200.1 CDS Mvan_4418 NC_008726.1 4740902 4741162 D hypothetical protein 4740902..4741162 Mycobacterium vanbaalenii PYR-1 4649009 YP_955201.1 CDS Mvan_4419 NC_008726.1 4741623 4742099 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mmc:Mmcs_3915 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(4741623..4742099) Mycobacterium vanbaalenii PYR-1 4649010 YP_955202.1 CDS Mvan_4420 NC_008726.1 4742126 4742725 R PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3916 isochorismatase hydrolase; isochorismatase hydrolase complement(4742126..4742725) Mycobacterium vanbaalenii PYR-1 4649011 YP_955203.1 CDS Mvan_4421 NC_008726.1 4742824 4743570 R PFAM: inositol monophosphatase; KEGG: mpa:MAP2058c CysQ_2; inositol monophosphatase complement(4742824..4743570) Mycobacterium vanbaalenii PYR-1 4649012 YP_955204.1 CDS Mvan_4422 NC_008726.1 4743567 4745423 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein complement(4743567..4745423) Mycobacterium vanbaalenii PYR-1 4649013 YP_955205.1 CDS Mvan_4423 NC_008726.1 4745487 4746416 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(4745487..4746416) Mycobacterium vanbaalenii PYR-1 4649014 YP_955206.1 CDS Mvan_4424 NC_008726.1 4746572 4747063 R PFAM: carbonic anhydrase; KEGG: mmc:Mmcs_3921 carbonic anhydrase; carbonic anhydrase complement(4746572..4747063) Mycobacterium vanbaalenii PYR-1 4649015 YP_955207.1 CDS Mvan_4425 NC_008726.1 4747193 4749079 R PFAM: glycosyl transferase, family 39; KEGG: mmc:Mmcs_3922 glycosyl transferase, family 39; glycosyl transferase family protein complement(4747193..4749079) Mycobacterium vanbaalenii PYR-1 4649016 YP_955208.1 CDS Mvan_4426 NC_008726.1 4749076 4750389 R PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: mmc:Mmcs_3923 glycosyl transferase, family 2; glycosyl transferase family protein complement(4749076..4750389) Mycobacterium vanbaalenii PYR-1 4649017 YP_955209.1 CDS Mvan_4427 NC_008726.1 4750402 4752282 R PFAM: glycosyl transferase, family 39; KEGG: mmc:Mmcs_3924 glycosyl transferase, family 39; glycosyl transferase family protein complement(4750402..4752282) Mycobacterium vanbaalenii PYR-1 4649018 YP_955210.1 CDS Mvan_4428 NC_008726.1 4752306 4753910 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_3925 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4752306..4753910) Mycobacterium vanbaalenii PYR-1 4649019 YP_955211.1 CDS Mvan_4429 NC_008726.1 4753924 4754676 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_3926 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(4753924..4754676) Mycobacterium vanbaalenii PYR-1 4649045 YP_955212.1 CDS Mvan_4430 NC_008726.1 4755198 4756175 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3928 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4755198..4756175 Mycobacterium vanbaalenii PYR-1 4649046 YP_955213.1 CDS Mvan_4431 NC_008726.1 4756172 4757071 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3929 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4756172..4757071 Mycobacterium vanbaalenii PYR-1 4649047 YP_955214.1 CDS Mvan_4432 NC_008726.1 4757100 4758935 D KEGG: mmc:Mmcs_3930 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 4757100..4758935 Mycobacterium vanbaalenii PYR-1 4649048 YP_955215.1 CDS Mvan_4433 NC_008726.1 4759058 4760710 D PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_3931 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4759058..4760710 Mycobacterium vanbaalenii PYR-1 4649049 YP_955216.1 CDS Mvan_4434 NC_008726.1 4760700 4761959 R PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2492c hypothetical protein; alpha/beta hydrolase fold protein complement(4760700..4761959) Mycobacterium vanbaalenii PYR-1 4649050 YP_955217.1 CDS Mvan_4435 NC_008726.1 4761995 4764652 R KEGG: mmc:Mmcs_3934 hypothetical protein; hypothetical protein complement(4761995..4764652) Mycobacterium vanbaalenii PYR-1 4649051 YP_955218.1 CDS Mvan_4436 NC_008726.1 4764649 4765800 R PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_3935 metallophosphoesterase; metallophosphoesterase complement(4764649..4765800) Mycobacterium vanbaalenii PYR-1 4649052 YP_955219.1 CDS Mvan_4437 NC_008726.1 4765914 4766432 D PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3936 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase, SixA 4765914..4766432 Mycobacterium vanbaalenii PYR-1 4649053 YP_955220.1 CDS Mvan_4438 NC_008726.1 4766446 4766991 R KEGG: mmc:Mmcs_3938 putative lipoprotein LprC; putative lipoprotein LprC complement(4766446..4766991) Mycobacterium vanbaalenii PYR-1 4649054 YP_955221.1 CDS Mvan_4439 NC_008726.1 4766988 4767569 R KEGG: mmc:Mmcs_3939 putative lipoprotein LprB; putative lipoprotein LprB complement(4766988..4767569) Mycobacterium vanbaalenii PYR-1 4649055 YP_955222.1 CDS Mvan_4440 NC_008726.1 4767637 4769421 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3940 ABC transporter related; ABC transporter--like protein 4767637..4769421 Mycobacterium vanbaalenii PYR-1 4649056 YP_955223.1 CDS Mvan_4441 NC_008726.1 4769418 4771346 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3941 ABC transporter, transmembrane region; ABC transporter 4769418..4771346 Mycobacterium vanbaalenii PYR-1 4649057 YP_955224.1 CDS Mvan_4442 NC_008726.1 4771528 4773690 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_3942 formate dehydrogenase; molydopterin dinucleotide-binding region 4771528..4773690 Mycobacterium vanbaalenii PYR-1 4649058 YP_955225.1 CDS Mvan_4443 NC_008726.1 4773687 4774253 R KEGG: mmc:Mmcs_3943 hypothetical protein; hypothetical protein complement(4773687..4774253) Mycobacterium vanbaalenii PYR-1 4649059 YP_955226.1 CDS Mvan_4445 NC_008726.1 4774596 4775501 D PFAM: protein of unknown function DUF124; KEGG: mmc:Mmcs_3945 protein of unknown function DUF124; hypothetical protein 4774596..4775501 Mycobacterium vanbaalenii PYR-1 4649061 YP_955227.1 CDS Mvan_4446 NC_008726.1 4775503 4775934 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(4775503..4775934) Mycobacterium vanbaalenii PYR-1 4649062 YP_955228.1 CDS Mvan_4447 NC_008726.1 4775938 4776579 R PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_1437 protein of unknown function DUF305; hypothetical protein complement(4775938..4776579) Mycobacterium vanbaalenii PYR-1 4649063 YP_955229.1 CDS Mvan_4448 NC_008726.1 4776660 4776863 D PFAM: Heavy metal transport/detoxification protein; KEGG: fra:Francci3_0489 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 4776660..4776863 Mycobacterium vanbaalenii PYR-1 4649064 YP_955230.1 CDS Mvan_4449 NC_008726.1 4777018 4779231 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nfa:nfa1600 putative cation transporter; heavy metal translocating P-type ATPase 4777018..4779231 Mycobacterium vanbaalenii PYR-1 4649065 YP_955231.1 CDS Mvan_4450 NC_008726.1 4779404 4779847 D hypothetical protein 4779404..4779847 Mycobacterium vanbaalenii PYR-1 4649066 YP_955232.1 CDS Mvan_4451 NC_008726.1 4779947 4781503 R PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein complement(4779947..4781503) Mycobacterium vanbaalenii PYR-1 4649067 YP_955233.1 CDS Mvan_4452 NC_008726.1 4781581 4782702 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_3949 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase complement(4781581..4782702) Mycobacterium vanbaalenii PYR-1 4649068 YP_955234.1 CDS Mvan_4453 NC_008726.1 4782734 4783237 D KEGG: mmc:Mmcs_3950 hypothetical protein; hypothetical protein 4782734..4783237 Mycobacterium vanbaalenii PYR-1 4649069 YP_955235.1 CDS Mvan_4454 NC_008726.1 4783215 4784057 R SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_3952 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(4783215..4784057) Mycobacterium vanbaalenii PYR-1 4649070 YP_955236.1 CDS Mvan_4455 NC_008726.1 4784085 4784555 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3953 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4784085..4784555 Mycobacterium vanbaalenii PYR-1 4649071 YP_955237.1 CDS Mvan_4456 NC_008726.1 4784572 4785009 D PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_3954 histidine triad (HIT) protein; histidine triad (HIT) protein 4784572..4785009 Mycobacterium vanbaalenii PYR-1 4649072 YP_955238.1 CDS Mvan_4457 NC_008726.1 4785014 4785472 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_3955 hypothetical protein; hypothetical protein 4785014..4785472 Mycobacterium vanbaalenii PYR-1 4649073 YP_955239.1 CDS Mvan_4458 NC_008726.1 4785469 4786521 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_3956 luciferase-like protein; luciferase family protein complement(4785469..4786521) Mycobacterium vanbaalenii PYR-1 4649074 YP_955240.1 CDS Mvan_4459 NC_008726.1 4786555 4787409 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: mmc:Mmcs_3957 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein complement(4786555..4787409) Mycobacterium vanbaalenii PYR-1 4649075 YP_955241.1 CDS Mvan_4460 NC_008726.1 4787529 4788218 D KEGG: mmc:Mmcs_3233 putative conserved lipoprotein LppH; putative lipoprotein LppH 4787529..4788218 Mycobacterium vanbaalenii PYR-1 4649076 YP_955242.1 CDS Mvan_4461 NC_008726.1 4788296 4789540 D TIGRFAM: H+ Antiporter protein; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3958 drug antiporter protein; H+ antiporter protein 4788296..4789540 Mycobacterium vanbaalenii PYR-1 4649077 YP_955243.1 CDS Mvan_4462 NC_008726.1 4789623 4790510 D hypothetical protein 4789623..4790510 Mycobacterium vanbaalenii PYR-1 4649078 YP_955244.1 CDS Mvan_4463 NC_008726.1 4790515 4790859 R hypothetical protein complement(4790515..4790859) Mycobacterium vanbaalenii PYR-1 4649079 YP_955245.1 CDS Mvan_4464 NC_008726.1 4790922 4792283 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_3961 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein 4790922..4792283 Mycobacterium vanbaalenii PYR-1 4649080 YP_955246.1 CDS Mvan_4465 NC_008726.1 4792329 4793570 D PFAM: cytochrome P450; KEGG: mpa:MAP2518 putative cytochrome P-450; cytochrome P450 4792329..4793570 Mycobacterium vanbaalenii PYR-1 4649081 YP_955247.1 CDS Mvan_4466 NC_008726.1 4793570 4794151 D PFAM: regulatory protein, TetR; KEGG: mtc:MT1294 transcriptional regulator, TetR family; TetR family transcriptional regulator 4793570..4794151 Mycobacterium vanbaalenii PYR-1 4649082 YP_955248.1 CDS Mvan_4467 NC_008726.1 4794156 4796489 R PFAM: sulfatase; KEGG: mmc:Mmcs_3964 sulfatase; sulfatase complement(4794156..4796489) Mycobacterium vanbaalenii PYR-1 4649083 YP_955249.1 CDS Mvan_4468 NC_008726.1 4796664 4797380 R PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: mmc:Mmcs_3965 siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain-containing protein complement(4796664..4797380) Mycobacterium vanbaalenii PYR-1 4649084 YP_955250.1 CDS Mvan_4469 NC_008726.1 4797456 4798619 R PFAM: acyltransferase 3; KEGG: mmc:Mmcs_3966 acyltransferase 3; acyltransferase 3 complement(4797456..4798619) Mycobacterium vanbaalenii PYR-1 4649085 YP_955251.1 CDS Mvan_4470 NC_008726.1 4798616 4800310 R PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_3967 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase complement(4798616..4800310) Mycobacterium vanbaalenii PYR-1 4649086 YP_955252.1 CDS Mvan_4471 NC_008726.1 4800418 4800981 D KEGG: mmc:Mmcs_3968 LprE; LprE 4800418..4800981 Mycobacterium vanbaalenii PYR-1 4649087 YP_955253.1 CDS Mvan_4472 NC_008726.1 4801118 4804573 D KEGG: mmc:Mmcs_3969 nuclease (RecB family)-like protein; recombinase B 4801118..4804573 Mycobacterium vanbaalenii PYR-1 4649088 YP_955254.1 CDS Mvan_4473 NC_008726.1 4804570 4805922 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_2035 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 4804570..4805922 Mycobacterium vanbaalenii PYR-1 4649089 YP_955255.1 CDS Mvan_4474 NC_008726.1 4805925 4807808 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3970 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(4805925..4807808) Mycobacterium vanbaalenii PYR-1 4649090 YP_955256.1 CDS Mvan_4475 NC_008726.1 4807909 4809135 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3971 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(4807909..4809135) Mycobacterium vanbaalenii PYR-1 4649091 YP_955257.1 CDS Mvan_4476 NC_008726.1 4809321 4810064 D KEGG: mmc:Mmcs_3972 hypothetical protein; hypothetical protein 4809321..4810064 Mycobacterium vanbaalenii PYR-1 4649092 YP_955258.1 CDS kgd NC_008726.1 4810214 4814002 D kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase 4810214..4814002 Mycobacterium vanbaalenii PYR-1 4649093 YP_955259.1 CDS Mvan_4478 NC_008726.1 4814048 4814401 R PFAM: protein of unknown function DUF732; KEGG: mmc:Mmcs_3974 protein of unknown function DUF732; hypothetical protein complement(4814048..4814401) Mycobacterium vanbaalenii PYR-1 4649094 YP_955260.1 CDS Mvan_4479 NC_008726.1 4814534 4815364 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3975 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4814534..4815364 Mycobacterium vanbaalenii PYR-1 4649095 YP_955261.1 CDS Mvan_4480 NC_008726.1 4815385 4816206 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_3976 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(4815385..4816206) Mycobacterium vanbaalenii PYR-1 4645519 YP_955262.1 CDS Mvan_4481 NC_008726.1 4816256 4817449 R PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: mmc:Mmcs_3977 malate dehydrogenase (oxaloacetate decarboxylating); malate dehydrogenase complement(4816256..4817449) Mycobacterium vanbaalenii PYR-1 4645520 YP_955263.1 CDS Mvan_4482 NC_008726.1 4817570 4818694 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; KEGG: mmc:Mmcs_3978 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 4817570..4818694 Mycobacterium vanbaalenii PYR-1 4645521 YP_955264.1 CDS Mvan_4483 NC_008726.1 4818805 4819398 R KEGG: mmc:Mmcs_3979 hypothetical protein; hypothetical protein complement(4818805..4819398) Mycobacterium vanbaalenii PYR-1 4645522 YP_955265.1 CDS Mvan_4484 NC_008726.1 4819395 4820570 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpa:MAP2545c probable ABC-transport protein, ATP-binding component; ABC transporter--like protein complement(4819395..4820570) Mycobacterium vanbaalenii PYR-1 4645523 YP_955266.1 CDS Mvan_4485 NC_008726.1 4820690 4821250 R KEGG: mmc:Mmcs_3984 hypothetical protein; hypothetical protein complement(4820690..4821250) Mycobacterium vanbaalenii PYR-1 4645524 YP_955267.1 CDS Mvan_4486 NC_008726.1 4821345 4822001 D KEGG: mbo:Mb1265c hypothetical protein; hypothetical protein 4821345..4822001 Mycobacterium vanbaalenii PYR-1 4645525 YP_955268.1 CDS Mvan_4487 NC_008726.1 4822006 4822962 R PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_3986 citryl-CoA lyase; citrate (pro-3S)-lyase complement(4822006..4822962) Mycobacterium vanbaalenii PYR-1 4645526 YP_955269.1 CDS Mvan_4488 NC_008726.1 4822989 4824284 D PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: mmc:Mmcs_3987 MgtE intracellular region; MgtE integral membrane protein 4822989..4824284 Mycobacterium vanbaalenii PYR-1 4645527 YP_955270.1 CDS Mvan_4489 NC_008726.1 4824281 4824826 D PFAM: protein of unknown function DUF1003; KEGG: mmc:Mmcs_3988 protein of unknown function DUF1003; hypothetical protein 4824281..4824826 Mycobacterium vanbaalenii PYR-1 4645528 YP_955271.1 CDS Mvan_4490 NC_008726.1 4824914 4826257 D PFAM: Lytic transglycosylase, catalytic; KEGG: mmc:Mmcs_3989 hypothetical protein; lytic transglycosylase catalytic subunit 4824914..4826257 Mycobacterium vanbaalenii PYR-1 4645529 YP_955272.1 CDS Mvan_4491 NC_008726.1 4826563 4827774 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mpa:MAP2050 IS1601_B_2 transposase; transposase, IS111A/IS1328/IS1533 4826563..4827774 Mycobacterium vanbaalenii PYR-1 4645530 YP_955273.1 CDS Mvan_4492 NC_008726.1 4827811 4828938 D PFAM: protein of unknown function DUF59; KEGG: mmc:Mmcs_3990 protein of unknown function DUF59; hypothetical protein 4827811..4828938 Mycobacterium vanbaalenii PYR-1 4645531 YP_955274.1 CDS Mvan_4493 NC_008726.1 4828953 4829381 R mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase complement(4828953..4829381) Mycobacterium vanbaalenii PYR-1 4645532 YP_955275.1 CDS Mvan_4494 NC_008726.1 4829384 4830874 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mmc:Mmcs_3992 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap complement(4829384..4830874) Mycobacterium vanbaalenii PYR-1 4645533 YP_955276.1 CDS Mvan_4495 NC_008726.1 4830965 4831363 R KEGG: mmc:Mmcs_3993 hypothetical protein; hypothetical protein complement(4830965..4831363) Mycobacterium vanbaalenii PYR-1 4645534 YP_955277.1 CDS Mvan_4496 NC_008726.1 4831457 4832266 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein is involved in heat shock, oxidative stress and virulence; RNA polymerase sigma factor SigE complement(4831457..4832266) Mycobacterium vanbaalenii PYR-1 4645535 YP_955278.1 CDS Mvan_4497 NC_008726.1 4832366 4833124 D PFAM: O-methyltransferase, family 3; Methyltransferase type 11; KEGG: mmc:Mmcs_3995 O-methyltransferase, family 3; O-methyltransferase family protein 4832366..4833124 Mycobacterium vanbaalenii PYR-1 4645536 YP_955279.1 CDS Mvan_4498 NC_008726.1 4833275 4833937 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3996 transcriptional regulator, TetR family; TetR family transcriptional regulator 4833275..4833937 Mycobacterium vanbaalenii PYR-1 4645537 YP_955280.1 CDS Mvan_4499 NC_008726.1 4833930 4834835 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3997 ABC transporter related; ABC transporter--like protein 4833930..4834835 Mycobacterium vanbaalenii PYR-1 4645538 YP_955281.1 CDS Mvan_4500 NC_008726.1 4834832 4836454 D KEGG: mmc:Mmcs_3998 putative ABC transporter membrane-spanning protein; ABC transporter 4834832..4836454 Mycobacterium vanbaalenii PYR-1 4645539 YP_955282.1 CDS Mvan_4501 NC_008726.1 4836472 4837146 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mmc:Mmcs_3999 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 4836472..4837146 Mycobacterium vanbaalenii PYR-1 4645540 YP_955283.1 CDS Mvan_4502 NC_008726.1 4837166 4837747 D KEGG: tfu:Tfu_0955 hypothetical protein; hypothetical protein 4837166..4837747 Mycobacterium vanbaalenii PYR-1 4645541 YP_955284.1 CDS glgC NC_008726.1 4837842 4839056 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(4837842..4839056) Mycobacterium vanbaalenii PYR-1 4645542 YP_955285.1 CDS Mvan_4504 NC_008726.1 4839219 4840382 D TIGRFAM: glycogen synthase; PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_4001 glycogen synthase; glycogen synthase 4839219..4840382 Mycobacterium vanbaalenii PYR-1 4645543 YP_955286.1 CDS Mvan_4505 NC_008726.1 4840395 4840562 R KEGG: mbo:Mb1243 hypothetical protein; hypothetical protein complement(4840395..4840562) Mycobacterium vanbaalenii PYR-1 4646822 YP_955287.1 CDS Mvan_4506 NC_008726.1 4840753 4841364 R KEGG: mmc:Mmcs_4003 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(4840753..4841364) Mycobacterium vanbaalenii PYR-1 4646823 YP_955288.1 CDS Mvan_4507 NC_008726.1 4841361 4841729 R KEGG: mmc:Mmcs_4004 hypothetical protein; hypothetical protein complement(4841361..4841729) Mycobacterium vanbaalenii PYR-1 4646824 YP_955289.1 CDS Mvan_4508 NC_008726.1 4841781 4842740 R PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_4005 glycosyl transferase, family 2; putative glucosyl-3-phosphoglycerate synthase complement(4841781..4842740) Mycobacterium vanbaalenii PYR-1 4646825 YP_955290.1 CDS Mvan_4509 NC_008726.1 4842737 4843585 R KEGG: mmc:Mmcs_4006 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase complement(4842737..4843585) Mycobacterium vanbaalenii PYR-1 4646826 YP_955291.1 CDS Mvan_4510 NC_008726.1 4843699 4845504 R activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase complement(4843699..4845504) Mycobacterium vanbaalenii PYR-1 4646827 YP_955292.1 CDS Mvan_4511 NC_008726.1 4845544 4846101 R PFAM: conserved hypothetical protein 730; KEGG: mmc:Mmcs_4008 conserved hypothetical protein 730; hypothetical protein complement(4845544..4846101) Mycobacterium vanbaalenii PYR-1 4646828 YP_955293.1 CDS Mvan_4512 NC_008726.1 4846211 4848133 D KEGG: mmc:Mmcs_4009 ATPas; ATPase 4846211..4848133 Mycobacterium vanbaalenii PYR-1 4646829 YP_955294.1 CDS Mvan_4513 NC_008726.1 4848207 4848962 D KEGG: mmc:Mmcs_4010 hypothetical protein; hypothetical protein 4848207..4848962 Mycobacterium vanbaalenii PYR-1 4646830 YP_955295.1 CDS Mvan_4514 NC_008726.1 4848959 4850566 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4011 ABC transporter related; ABC transporter--like protein complement(4848959..4850566) Mycobacterium vanbaalenii PYR-1 4646831 YP_955296.1 CDS Mvan_4515 NC_008726.1 4850694 4851758 R catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase complement(4850694..4851758) Mycobacterium vanbaalenii PYR-1 4646832 YP_955297.1 CDS Mvan_4516 NC_008726.1 4851801 4852814 R PFAM: aminotransferase, class IV; KEGG: afm:Afu7g06900 branched-chain amino acid aminotransferase protein; class IV aminotransferase complement(4851801..4852814) Mycobacterium vanbaalenii PYR-1 4646833 YP_955298.1 CDS Mvan_4517 NC_008726.1 4852875 4854383 R PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_3532 amino acid permease-associated region; amino acid permease-associated protein complement(4852875..4854383) Mycobacterium vanbaalenii PYR-1 4646834 YP_955299.1 CDS Mvan_4518 NC_008726.1 4854489 4855397 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: fal:FRAAL4426 putative LysR family transcriptional regulator; LysR family transcriptional regulator complement(4854489..4855397) Mycobacterium vanbaalenii PYR-1 4646835 YP_955300.1 CDS Mvan_4519 NC_008726.1 4855477 4856433 D KEGG: mmc:Mmcs_4013 putative transferase; putative transferase 4855477..4856433 Mycobacterium vanbaalenii PYR-1 4646836 YP_955301.1 CDS Mvan_4520 NC_008726.1 4856551 4857123 R PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: mmc:Mmcs_0342 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins complement(4856551..4857123) Mycobacterium vanbaalenii PYR-1 4646837 YP_955302.1 CDS Mvan_4521 NC_008726.1 4857246 4857596 R KEGG: mmc:Mmcs_4019 hypothetical protein; hypothetical protein complement(4857246..4857596) Mycobacterium vanbaalenii PYR-1 4646838 YP_955303.1 CDS Mvan_4522 NC_008726.1 4857587 4859005 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(4857587..4859005) Mycobacterium vanbaalenii PYR-1 4646839 YP_955304.1 CDS Mvan_4523 NC_008726.1 4859047 4859583 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4021 NUDIX hydrolase; NUDIX hydrolase 4859047..4859583 Mycobacterium vanbaalenii PYR-1 4646840 YP_955305.1 CDS Mvan_4524 NC_008726.1 4859752 4860252 D KEGG: mmc:Mmcs_4024 hypothetical protein; hypothetical protein 4859752..4860252 Mycobacterium vanbaalenii PYR-1 4646841 YP_955306.1 CDS Mvan_4525 NC_008726.1 4860249 4861211 R PFAM: Proline dehydrogenase; KEGG: mmc:Mmcs_4025 proline dehydrogenase; proline dehydrogenase complement(4860249..4861211) Mycobacterium vanbaalenii PYR-1 4646842 YP_955307.1 CDS Mvan_4526 NC_008726.1 4861215 4862843 R TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4026 delta-1-pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase complement(4861215..4862843) Mycobacterium vanbaalenii PYR-1 4646843 YP_955308.1 CDS Mvan_4527 NC_008726.1 4862937 4864514 D KEGG: mmc:Mmcs_4027 hypothetical protein; hypothetical protein 4862937..4864514 Mycobacterium vanbaalenii PYR-1 4646844 YP_955309.1 CDS Mvan_4528 NC_008726.1 4864542 4865621 R catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase complement(4864542..4865621) Mycobacterium vanbaalenii PYR-1 4646845 YP_955310.1 CDS Mvan_4529 NC_008726.1 4865687 4866010 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_4030 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(4865687..4866010) Mycobacterium vanbaalenii PYR-1 4646846 YP_955311.1 CDS Mvan_4530 NC_008726.1 4866250 4867137 R hypothetical protein complement(4866250..4867137) Mycobacterium vanbaalenii PYR-1 4646847 YP_955312.1 CDS Mvan_4531 NC_008726.1 4867140 4867685 D PFAM: YceI family protein; KEGG: mmc:Mmcs_4031 YceI; hypothetical protein 4867140..4867685 Mycobacterium vanbaalenii PYR-1 4648742 YP_955313.1 CDS Mvan_4532 NC_008726.1 4867716 4868624 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: jan:Jann_2039 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(4867716..4868624) Mycobacterium vanbaalenii PYR-1 4648743 YP_955314.1 CDS fbiC NC_008726.1 4868792 4871371 R 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; FO synthase complement(4868792..4871371) Mycobacterium vanbaalenii PYR-1 4648744 YP_955315.1 CDS Mvan_4534 NC_008726.1 4871468 4871863 R KEGG: mmc:Mmcs_4033 hypothetical protein; hypothetical protein complement(4871468..4871863) Mycobacterium vanbaalenii PYR-1 4648745 YP_955316.1 CDS Mvan_4535 NC_008726.1 4872043 4872897 R PFAM: LmbE family protein; KEGG: mmc:Mmcs_4034 LmbE-like protein; LmbE family protein complement(4872043..4872897) Mycobacterium vanbaalenii PYR-1 4648746 YP_955317.1 CDS Mvan_4536 NC_008726.1 4873354 4874640 D KEGG: mmc:Mmcs_4038 hypothetical protein; hypothetical protein 4873354..4874640 Mycobacterium vanbaalenii PYR-1 4648747 YP_955318.1 CDS Mvan_4537 NC_008726.1 4874686 4875642 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: nfa:nfa30840 putative dioxygenase; 2-nitropropane dioxygenase complement(4874686..4875642) Mycobacterium vanbaalenii PYR-1 4648748 YP_955319.1 CDS Mvan_4538 NC_008726.1 4875829 4877025 D PFAM: Cl- channel, voltage-gated family protein; KEGG: mpa:MAP3690 hypothetical protein; Cl- channel, voltage-gated family protein 4875829..4877025 Mycobacterium vanbaalenii PYR-1 4648749 YP_955320.1 CDS Mvan_4539 NC_008726.1 4877009 4878835 R PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_4039 extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(4877009..4878835) Mycobacterium vanbaalenii PYR-1 4648750 YP_955321.1 CDS Mvan_4540 NC_008726.1 4878964 4880868 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: mmc:Mmcs_4040 GTP-binding protein TypA; GTP-binding protein TypA complement(4878964..4880868) Mycobacterium vanbaalenii PYR-1 4648751 YP_955322.1 CDS Mvan_4541 NC_008726.1 4881222 4881494 D KEGG: mmc:Mmcs_4042 hypothetical protein; hypothetical protein 4881222..4881494 Mycobacterium vanbaalenii PYR-1 4648752 YP_955323.1 CDS Mvan_4542 NC_008726.1 4881504 4882580 R hypothetical protein complement(4881504..4882580) Mycobacterium vanbaalenii PYR-1 4648753 YP_955324.1 CDS Mvan_4543 NC_008726.1 4882642 4883373 R TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma complement(4882642..4883373) Mycobacterium vanbaalenii PYR-1 4648754 YP_955325.1 CDS Mvan_4544 NC_008726.1 4883375 4884055 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: mmc:Mmcs_1261 nitrate reductase molybdenum cofactor assembly chaperone; nitrate reductase molybdenum cofactor assembly chaperone complement(4883375..4884055) Mycobacterium vanbaalenii PYR-1 4648755 YP_955326.1 CDS Mvan_4545 NC_008726.1 4884055 4885707 R TIGRFAM: nitrate reductase, beta subunit; KEGG: mmc:Mmcs_1262 nitrate reductase, beta subunit; nitrate reductase subunit beta complement(4884055..4885707) Mycobacterium vanbaalenii PYR-1 4648756 YP_955327.1 CDS Mvan_4546 NC_008726.1 4885736 4889437 R KEGG: mmc:Mmcs_1263 nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha complement(4885736..4889437) Mycobacterium vanbaalenii PYR-1 4648757 YP_955328.1 CDS Mvan_4547 NC_008726.1 4889434 4890606 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1264 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(4889434..4890606) Mycobacterium vanbaalenii PYR-1 4648758 YP_955329.1 CDS Mvan_4548 NC_008726.1 4890800 4891246 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4043 NUDIX hydrolase; NUDIX hydrolase complement(4890800..4891246) Mycobacterium vanbaalenii PYR-1 4648759 YP_955330.1 CDS phhB NC_008726.1 4891274 4891555 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4891274..4891555 Mycobacterium vanbaalenii PYR-1 4648760 YP_955331.1 CDS pimE NC_008726.1 4891503 4892723 R involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis; mannosyltransferase complement(4891503..4892723) Mycobacterium vanbaalenii PYR-1 4648761 YP_955332.1 CDS Mvan_4551 NC_008726.1 4892863 4893537 D KEGG: mmc:Mmcs_4046 hypothetical protein; hypothetical protein 4892863..4893537 Mycobacterium vanbaalenii PYR-1 4648762 YP_955333.1 CDS Mvan_4552 NC_008726.1 4893588 4894559 D KEGG: mmc:Mmcs_4047 hypothetical protein; hypothetical protein 4893588..4894559 Mycobacterium vanbaalenii PYR-1 4648763 YP_955334.1 CDS Mvan_4553 NC_008726.1 4894639 4894785 R KEGG: mmc:Mmcs_4048 hypothetical protein; hypothetical protein complement(4894639..4894785) Mycobacterium vanbaalenii PYR-1 4648764 YP_955335.1 CDS Mvan_4554 NC_008726.1 4894836 4895495 D PFAM: nitroreductase; KEGG: mpa:MAP0746 hypothetical protein; nitroreductase 4894836..4895495 Mycobacterium vanbaalenii PYR-1 4648765 YP_955336.1 CDS Mvan_4555 NC_008726.1 4895527 4895916 D PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2363 resolvase-like; resolvase domain-containing protein 4895527..4895916 Mycobacterium vanbaalenii PYR-1 4648766 YP_955337.1 CDS Mvan_4556 NC_008726.1 4895906 4896490 R PFAM: HhH-GPD family protein; KEGG: mmc:Mmcs_4049 HhH-GPD; HhH-GPD family protein complement(4895906..4896490) Mycobacterium vanbaalenii PYR-1 4649020 YP_955338.1 CDS Mvan_4557 NC_008726.1 4896670 4896966 D hypothetical protein 4896670..4896966 Mycobacterium vanbaalenii PYR-1 4649021 YP_955339.1 CDS Mvan_4558 NC_008726.1 4897103 4898572 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2471 protein of unknown function DUF222; hypothetical protein complement(4897103..4898572) Mycobacterium vanbaalenii PYR-1 4649022 YP_955340.1 CDS Mvan_4559 NC_008726.1 4898937 4900166 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: mmc:Mmcs_4050 signal transduction histidine kinase, LytS; signal transduction histidine kinase, LytS 4898937..4900166 Mycobacterium vanbaalenii PYR-1 4649023 YP_955341.1 CDS Mvan_4560 NC_008726.1 4900170 4900979 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mmc:Mmcs_4051 response regulator receiver protein; response regulator receiver protein 4900170..4900979 Mycobacterium vanbaalenii PYR-1 4649024 YP_955342.1 CDS Mvan_4561 NC_008726.1 4900966 4901340 D KEGG: mmc:Mmcs_4052 hypothetical protein; hypothetical protein 4900966..4901340 Mycobacterium vanbaalenii PYR-1 4649025 YP_955343.1 CDS Mvan_4562 NC_008726.1 4901337 4903079 D PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_4053 Na+/solute symporter; Na+/solute symporter 4901337..4903079 Mycobacterium vanbaalenii PYR-1 4649026 YP_955344.1 CDS Mvan_4563 NC_008726.1 4903228 4903578 D PFAM: protein of unknown function DUF485; KEGG: nfa:nfa17940 hypothetical protein; hypothetical protein 4903228..4903578 Mycobacterium vanbaalenii PYR-1 4649027 YP_955345.1 CDS Mvan_4564 NC_008726.1 4903575 4905206 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_4055 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 4903575..4905206 Mycobacterium vanbaalenii PYR-1 4649028 YP_955346.1 CDS Mvan_4565 NC_008726.1 4905339 4906637 D KEGG: mpa:MAP3276c hypothetical protein; hypothetical protein 4905339..4906637 Mycobacterium vanbaalenii PYR-1 4649029 YP_955347.1 CDS Mvan_4566 NC_008726.1 4906721 4906903 R KEGG: mpa:MAP2629c hypothetical protein; hypothetical protein complement(4906721..4906903) Mycobacterium vanbaalenii PYR-1 4649030 YP_955348.1 CDS Mvan_4567 NC_008726.1 4907000 4907443 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_4058 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(4907000..4907443) Mycobacterium vanbaalenii PYR-1 4649031 YP_955349.1 CDS Mvan_4568 NC_008726.1 4907527 4908447 D PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_4060 O-methyltransferase-like protein; O-methyltransferase domain-containing protein 4907527..4908447 Mycobacterium vanbaalenii PYR-1 4649032 YP_955350.1 CDS Mvan_4569 NC_008726.1 4908474 4908839 R PFAM: regulatory protein GntR, HTH; KEGG: mmc:Mmcs_4061 transcriptional regulator, GntR family; regulatory protein GntR complement(4908474..4908839) Mycobacterium vanbaalenii PYR-1 4649033 YP_955351.1 CDS Mvan_4570 NC_008726.1 4908883 4909593 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 4908883..4909593 Mycobacterium vanbaalenii PYR-1 4649034 YP_955352.1 CDS Mvan_4571 NC_008726.1 4909590 4910219 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4063 methyltransferase type 12; type 12 methyltransferase complement(4909590..4910219) Mycobacterium vanbaalenii PYR-1 4649035 YP_955353.1 CDS Mvan_4572 NC_008726.1 4910200 4910904 R PFAM: regulatory protein, TetR; KEGG: hch:HCH_05799 transcriptional regulator; TetR family transcriptional regulator complement(4910200..4910904) Mycobacterium vanbaalenii PYR-1 4649036 YP_955354.1 CDS Mvan_4573 NC_008726.1 4910897 4913233 R PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4064 MmpL; MMPL domain-containing protein complement(4910897..4913233) Mycobacterium vanbaalenii PYR-1 4649037 YP_955355.1 CDS Mvan_4574 NC_008726.1 4913337 4913933 D PFAM: TQO small subunit DoxD; DoxX family protein; KEGG: mmc:Mmcs_4065 DoxX; DoxX family protein 4913337..4913933 Mycobacterium vanbaalenii PYR-1 4649038 YP_955356.1 CDS Mvan_4575 NC_008726.1 4914023 4914172 D KEGG: mpa:MAP2636 hypothetical protein; hypothetical protein 4914023..4914172 Mycobacterium vanbaalenii PYR-1 4649039 YP_955357.1 CDS Mvan_4576 NC_008726.1 4914257 4915249 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4067 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(4914257..4915249) Mycobacterium vanbaalenii PYR-1 4649040 YP_955358.1 CDS Mvan_4577 NC_008726.1 4915249 4916001 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4068 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4915249..4916001) Mycobacterium vanbaalenii PYR-1 4649041 YP_955359.1 CDS Mvan_4578 NC_008726.1 4916038 4917132 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4069 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(4916038..4917132) Mycobacterium vanbaalenii PYR-1 4649042 YP_955360.1 CDS Mvan_4579 NC_008726.1 4917238 4918074 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4917238..4918074 Mycobacterium vanbaalenii PYR-1 4649043 YP_955361.1 CDS Mvan_4580 NC_008726.1 4918144 4919475 D TIGRFAM: H+ Antiporter protein; PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO6805 integral membrane efflux protein; H+ antiporter protein 4918144..4919475 Mycobacterium vanbaalenii PYR-1 4649044 YP_955362.1 CDS Mvan_4581 NC_008726.1 4919600 4920814 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sth:STH305 transposase; transposase IS116/IS110/IS902 family protein 4919600..4920814 Mycobacterium vanbaalenii PYR-1 4646922 YP_955363.1 CDS Mvan_4582 NC_008726.1 4921159 4921869 R PFAM: Abortive infection protein; KEGG: mpa:MAP2640c hypothetical protein; abortive infection protein complement(4921159..4921869) Mycobacterium vanbaalenii PYR-1 4646923 YP_955364.1 CDS Mvan_4583 NC_008726.1 4921866 4923014 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: mmc:Mmcs_4073 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4921866..4923014) Mycobacterium vanbaalenii PYR-1 4646924 YP_955365.1 CDS Mvan_4584 NC_008726.1 4923591 4924607 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dra:DR2595 oxidoreductase; short-chain dehydrogenase/reductase SDR 4923591..4924607 Mycobacterium vanbaalenii PYR-1 4646925 YP_955366.1 CDS Mvan_4585 NC_008726.1 4924604 4925191 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4579 transcriptional regulator, TetR family; TetR family transcriptional regulator 4924604..4925191 Mycobacterium vanbaalenii PYR-1 4646926 YP_955367.1 CDS Mvan_4586 NC_008726.1 4925242 4926063 D PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_4077 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 4925242..4926063 Mycobacterium vanbaalenii PYR-1 4646927 YP_955368.1 CDS Mvan_4587 NC_008726.1 4926182 4927324 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4078 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(4926182..4927324) Mycobacterium vanbaalenii PYR-1 4646928 YP_955369.1 CDS Mvan_4588 NC_008726.1 4927333 4928139 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_4079 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(4927333..4928139) Mycobacterium vanbaalenii PYR-1 4646929 YP_955370.1 CDS Mvan_4589 NC_008726.1 4928136 4929293 R KEGG: mmc:Mmcs_4080 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(4928136..4929293) Mycobacterium vanbaalenii PYR-1 4646930 YP_955371.1 CDS Mvan_4590 NC_008726.1 4929491 4930282 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4081 regulatory protein GntR, HTH; GntR family transcriptional regulator 4929491..4930282 Mycobacterium vanbaalenii PYR-1 4646931 YP_955372.1 CDS Mvan_4591 NC_008726.1 4930286 4932010 R KEGG: mmc:Mmcs_4082 hypothetical protein; hypothetical protein complement(4930286..4932010) Mycobacterium vanbaalenii PYR-1 4646932 YP_955373.1 CDS Mvan_4592 NC_008726.1 4932099 4932623 R PFAM: DoxX family protein; KEGG: mmc:Mmcs_4083 DoxX; DoxX family protein complement(4932099..4932623) Mycobacterium vanbaalenii PYR-1 4646933 YP_955374.1 CDS Mvan_4593 NC_008726.1 4932646 4933413 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO0511 dehydrogenase (secreted protein); short-chain dehydrogenase/reductase SDR complement(4932646..4933413) Mycobacterium vanbaalenii PYR-1 4646934 YP_955375.1 CDS Mvan_4594 NC_008726.1 4933439 4934038 D PFAM: regulatory protein, TetR; KEGG: fal:FRAAL4715 putative transcriptional regulator of the TetR family; TetR family transcriptional regulator 4933439..4934038 Mycobacterium vanbaalenii PYR-1 4646935 YP_955376.1 CDS Mvan_4595 NC_008726.1 4934035 4935474 R PFAM: Carotenoid oxygenase; KEGG: mpa:MAP0465 hypothetical protein; carotenoid oxygenase complement(4934035..4935474) Mycobacterium vanbaalenii PYR-1 4646936 YP_955377.1 CDS Mvan_4596 NC_008726.1 4935540 4936796 R KEGG: mmc:Mmcs_4084 protein of unknown function UPF0089; hypothetical protein complement(4935540..4936796) Mycobacterium vanbaalenii PYR-1 4646937 YP_955378.1 CDS Mvan_4597 NC_008726.1 4936826 4937629 R KEGG: mmc:Mmcs_4087 hypothetical protein; hypothetical protein complement(4936826..4937629) Mycobacterium vanbaalenii PYR-1 4646938 YP_955379.1 CDS Mvan_4598 NC_008726.1 4937626 4938360 R KEGG: mmc:Mmcs_4088 hypothetical protein; hypothetical protein complement(4937626..4938360) Mycobacterium vanbaalenii PYR-1 4646939 YP_955380.1 CDS Mvan_4599 NC_008726.1 4938521 4940020 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry; virulence factor Mce family protein complement(4938521..4940020) Mycobacterium vanbaalenii PYR-1 4646940 YP_955381.1 CDS Mvan_4600 NC_008726.1 4940022 4941173 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2022 virulence factor mce family protein; virulence factor Mce family protein complement(4940022..4941173) Mycobacterium vanbaalenii PYR-1 4646941 YP_955382.1 CDS Mvan_4601 NC_008726.1 4941173 4942537 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1657 mammalian cell entry; virulence factor Mce family protein complement(4941173..4942537) Mycobacterium vanbaalenii PYR-1 4646942 YP_955383.1 CDS Mvan_4602 NC_008726.1 4942534 4943886 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1656 mammalian cell entry; virulence factor Mce family protein complement(4942534..4943886) Mycobacterium vanbaalenii PYR-1 4646943 YP_955384.1 CDS Mvan_4603 NC_008726.1 4943883 4944923 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1655 mammalian cell entry; virulence factor Mce family protein complement(4943883..4944923) Mycobacterium vanbaalenii PYR-1 4646944 YP_955385.1 CDS Mvan_4604 NC_008726.1 4944958 4946406 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1524 mammalian cell entry; virulence factor Mce family protein complement(4944958..4946406) Mycobacterium vanbaalenii PYR-1 4646945 YP_955386.1 CDS Mvan_4605 NC_008726.1 4946408 4947262 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1523 protein of unknown function DUF140; hypothetical protein complement(4946408..4947262) Mycobacterium vanbaalenii PYR-1 4646946 YP_955387.1 CDS Mvan_4606 NC_008726.1 4947259 4948026 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140; hypothetical protein complement(4947259..4948026) Mycobacterium vanbaalenii PYR-1 4646947 YP_955388.1 CDS Mvan_4607 NC_008726.1 4948194 4948667 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mmc:Mmcs_4089 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(4948194..4948667) Mycobacterium vanbaalenii PYR-1 4646624 YP_955389.1 CDS Mvan_4608 NC_008726.1 4948821 4949441 R PFAM: regulatory protein, TetR; KEGG: xac:XAC0266 transcriptional regulator AcrR family; TetR family transcriptional regulator complement(4948821..4949441) Mycobacterium vanbaalenii PYR-1 4646625 YP_955390.1 CDS Mvan_4609 NC_008726.1 4949539 4950423 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_4090 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4949539..4950423 Mycobacterium vanbaalenii PYR-1 4646626 YP_955391.1 CDS Mvan_4610 NC_008726.1 4950420 4953353 D PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; KEGG: mmc:Mmcs_4091 aminotransferase class-III; hypothetical protein 4950420..4953353 Mycobacterium vanbaalenii PYR-1 4646627 YP_955392.1 CDS Mvan_4611 NC_008726.1 4953448 4953822 D PFAM: protein of unknown function DUF1486; Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein; limonene-1,2-epoxide hydrolase 4953448..4953822 Mycobacterium vanbaalenii PYR-1 4646628 YP_955393.1 CDS Mvan_4612 NC_008726.1 4953819 4954748 R KEGG: lil:LA1013 hypothetical protein; hypothetical protein complement(4953819..4954748) Mycobacterium vanbaalenii PYR-1 4646629 YP_955394.1 CDS Mvan_4613 NC_008726.1 4954795 4955580 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_4092 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 4954795..4955580 Mycobacterium vanbaalenii PYR-1 4646630 YP_955395.1 CDS Mvan_4614 NC_008726.1 4955751 4956428 D KEGG: mmc:Mmcs_4093 hypothetical protein; hypothetical protein 4955751..4956428 Mycobacterium vanbaalenii PYR-1 4646631 YP_955396.1 CDS Mvan_4615 NC_008726.1 4956544 4957116 D KEGG: mpa:MAP2031c hypothetical protein; hypothetical protein 4956544..4957116 Mycobacterium vanbaalenii PYR-1 4646632 YP_955397.1 CDS Mvan_4616 NC_008726.1 4957143 4957643 R hypothetical protein complement(4957143..4957643) Mycobacterium vanbaalenii PYR-1 4646633 YP_955398.1 CDS Mvan_4617 NC_008726.1 4957807 4958046 D KEGG: mpa:MAP0078 hypothetical protein; hypothetical protein 4957807..4958046 Mycobacterium vanbaalenii PYR-1 4646634 YP_955399.1 CDS Mvan_4618 NC_008726.1 4958090 4958584 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_1829 hypothetical protein; hypothetical protein 4958090..4958584 Mycobacterium vanbaalenii PYR-1 4646635 YP_955400.1 CDS Mvan_4619 NC_008726.1 4958712 4959314 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cef:CE1110 hypothetical protein; type 11 methyltransferase 4958712..4959314 Mycobacterium vanbaalenii PYR-1 4646636 YP_955401.1 CDS Mvan_4620 NC_008726.1 4959375 4960121 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4099 methyltransferase type 11; type 11 methyltransferase complement(4959375..4960121) Mycobacterium vanbaalenii PYR-1 4646637 YP_955402.1 CDS Mvan_4621 NC_008726.1 4960323 4961768 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_2471 protein of unknown function DUF222; hypothetical protein complement(4960323..4961768) Mycobacterium vanbaalenii PYR-1 4646638 YP_955403.1 CDS Mvan_4622 NC_008726.1 4961871 4962212 R KEGG: mmc:Mmcs_4096 hypothetical protein; hypothetical protein complement(4961871..4962212) Mycobacterium vanbaalenii PYR-1 4646639 YP_955404.1 CDS Mvan_4623 NC_008726.1 4962448 4963245 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bat:BAS4042 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(4962448..4963245) Mycobacterium vanbaalenii PYR-1 4646640 YP_955405.1 CDS Mvan_4624 NC_008726.1 4963676 4964041 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; KEGG: cef:CE1113 PhnA protein; alkylphosphonate utilization operon protein PhnA complement(4963676..4964041) Mycobacterium vanbaalenii PYR-1 4646641 YP_955406.1 CDS Mvan_4625 NC_008726.1 4964170 4965252 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(4964170..4965252) Mycobacterium vanbaalenii PYR-1 4646642 YP_955407.1 CDS Mvan_4626 NC_008726.1 4965326 4966429 D KEGG: mmc:Mmcs_4103 hypothetical protein; hypothetical protein 4965326..4966429 Mycobacterium vanbaalenii PYR-1 4646643 YP_955408.1 CDS Mvan_4627 NC_008726.1 4966448 4967125 R KEGG: mmc:Mmcs_0517 hypothetical protein; hypothetical protein complement(4966448..4967125) Mycobacterium vanbaalenii PYR-1 4646644 YP_955409.1 CDS Mvan_4628 NC_008726.1 4967130 4967513 R PFAM: protein of unknown function DUF202; KEGG: syn:sll0847 hypothetical protein; hypothetical protein complement(4967130..4967513) Mycobacterium vanbaalenii PYR-1 4646645 YP_955410.1 CDS Mvan_4629 NC_008726.1 4967651 4969141 D PFAM: sulfatase; KEGG: mac:MA2648 arylsulfatase; sulfatase 4967651..4969141 Mycobacterium vanbaalenii PYR-1 4646646 YP_955411.1 CDS Mvan_4630 NC_008726.1 4969160 4970941 R PFAM: penicillin-binding protein, transpeptidase; KEGG: nfa:nfa18430 putative penicillin-binding protein; penicillin-binding transpeptidase complement(4969160..4970941) Mycobacterium vanbaalenii PYR-1 4646647 YP_955412.1 CDS ispH NC_008726.1 4970975 4971988 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(4970975..4971988) Mycobacterium vanbaalenii PYR-1 4646648 YP_955413.1 CDS Mvan_4632 NC_008726.1 4972084 4972665 D KEGG: mmc:Mmcs_4106 hypothetical protein; hypothetical protein 4972084..4972665 Mycobacterium vanbaalenii PYR-1 4646649 YP_955414.1 CDS xseA NC_008726.1 4972662 4973894 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 4972662..4973894 Mycobacterium vanbaalenii PYR-1 4646998 YP_955415.1 CDS Mvan_4634 NC_008726.1 4973891 4974103 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: mpa:MAP2687 exodeoxyribonuclease small subunit; exodeoxyribonuclease VII small subunit 4973891..4974103 Mycobacterium vanbaalenii PYR-1 4646999 YP_955416.1 CDS Mvan_4635 NC_008726.1 4974165 4975292 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_4109 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase 4974165..4975292 Mycobacterium vanbaalenii PYR-1 4647000 YP_955417.1 CDS Mvan_4636 NC_008726.1 4975336 4976061 D KEGG: sme:SMc02114 hypothetical protein; hypothetical protein 4975336..4976061 Mycobacterium vanbaalenii PYR-1 4647001 YP_955418.1 CDS Mvan_4637 NC_008726.1 4976145 4976612 D KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein 4976145..4976612 Mycobacterium vanbaalenii PYR-1 4647002 YP_955419.1 CDS Mvan_4638 NC_008726.1 4976643 4977536 D KEGG: mmc:Mmcs_4114 putative nonspecific acid phosphatase precursor; putative nonspecific acid phosphatase 4976643..4977536 Mycobacterium vanbaalenii PYR-1 4647003 YP_955420.1 CDS Mvan_4639 NC_008726.1 4977529 4978416 D PFAM: protein of unknown function DUF323; KEGG: mmc:Mmcs_4115 protein of unknown function DUF323; hypothetical protein 4977529..4978416 Mycobacterium vanbaalenii PYR-1 4647004 YP_955421.1 CDS Mvan_4640 NC_008726.1 4978439 4980757 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase complement(4978439..4980757) Mycobacterium vanbaalenii PYR-1 4647005 YP_955422.1 CDS Mvan_4641 NC_008726.1 4980931 4981530 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: rxy:Rxyl_2316 bifunctional deaminase-reductase-like protein; deaminase-reductase domain-containing protein 4980931..4981530 Mycobacterium vanbaalenii PYR-1 4647006 YP_955423.1 CDS Mvan_4642 NC_008726.1 4981545 4981994 R KEGG: mmc:Mmcs_1071 hypothetical protein; hypothetical protein complement(4981545..4981994) Mycobacterium vanbaalenii PYR-1 4647007 YP_955424.1 CDS Mvan_4643 NC_008726.1 4982064 4982888 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4116 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4982064..4982888 Mycobacterium vanbaalenii PYR-1 4647008 YP_955425.1 CDS Mvan_4644 NC_008726.1 4982885 4983724 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4117 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4982885..4983724 Mycobacterium vanbaalenii PYR-1 4647009 YP_955426.1 CDS Mvan_4645 NC_008726.1 4983765 4984955 D PFAM: protein of unknown function UPF0118; KEGG: mmc:Mmcs_4118 protein of unknown function UPF0118; hypothetical protein 4983765..4984955 Mycobacterium vanbaalenii PYR-1 4647010 YP_955427.1 CDS Mvan_4646 NC_008726.1 4984936 4985733 R KEGG: mmc:Mmcs_4119 hypothetical protein; hypothetical protein complement(4984936..4985733) Mycobacterium vanbaalenii PYR-1 4647011 YP_955428.1 CDS Mvan_4647 NC_008726.1 4985747 4986472 R KEGG: mmc:Mmcs_4120 hypothetical protein; hypothetical protein complement(4985747..4986472) Mycobacterium vanbaalenii PYR-1 4647012 YP_955429.1 CDS glpX NC_008726.1 4986527 4987555 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 4986527..4987555 Mycobacterium vanbaalenii PYR-1 4647013 YP_955430.1 CDS fumC NC_008726.1 4987589 4989004 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 4987589..4989004 Mycobacterium vanbaalenii PYR-1 4647014 YP_955431.1 CDS Mvan_4650 NC_008726.1 4989178 4989408 D hypothetical protein 4989178..4989408 Mycobacterium vanbaalenii PYR-1 4647015 YP_955432.1 CDS Mvan_4651 NC_008726.1 4989438 4990181 R PFAM: polysaccharide deacetylase; KEGG: mbo:Mb1126 possible glycosyl hydrolase; polysaccharide deacetylase complement(4989438..4990181) Mycobacterium vanbaalenii PYR-1 4647016 YP_955433.1 CDS Mvan_4652 NC_008726.1 4990184 4991572 R PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: mmc:Mmcs_4129 PhoH-like protein; PhoH family protein complement(4990184..4991572) Mycobacterium vanbaalenii PYR-1 4647017 YP_955434.1 CDS Mvan_4653 NC_008726.1 4991715 4992542 R PFAM: fatty acid desaturase, type 2; KEGG: mmc:Mmcs_4130 fatty acid desaturase, type 2; fatty acid desaturase, type 2 complement(4991715..4992542) Mycobacterium vanbaalenii PYR-1 4647018 YP_955435.1 CDS Mvan_4654 NC_008726.1 4992678 4993877 D PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5; integrase catalytic subunit 4992678..4993877 Mycobacterium vanbaalenii PYR-1 4647019 YP_955436.1 CDS Mvan_4655 NC_008726.1 4994004 4995266 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_0130 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein complement(4994004..4995266) Mycobacterium vanbaalenii PYR-1 4647020 YP_955437.1 CDS glyA NC_008726.1 4995541 4997004 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(4995541..4997004) Mycobacterium vanbaalenii PYR-1 4647021 YP_955438.1 CDS Mvan_4657 NC_008726.1 4997105 4998301 R KEGG: mmc:Mmcs_4132 hypothetical protein; hypothetical protein complement(4997105..4998301) Mycobacterium vanbaalenii PYR-1 4647022 YP_955439.1 CDS Mvan_4658 NC_008726.1 4998332 4999270 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4998332..4999270 Mycobacterium vanbaalenii PYR-1 4649222 YP_955440.1 CDS Mvan_4659 NC_008726.1 4999298 4999708 R KEGG: mmc:Mmcs_4134 hypothetical protein; hypothetical protein complement(4999298..4999708) Mycobacterium vanbaalenii PYR-1 4649223 YP_955441.1 CDS Mvan_4660 NC_008726.1 4999808 5000224 R KEGG: mmc:Mmcs_4135 hypothetical protein; hypothetical protein complement(4999808..5000224) Mycobacterium vanbaalenii PYR-1 4649224 YP_955442.1 CDS Mvan_4661 NC_008726.1 5000378 5001727 R KEGG: mmc:Mmcs_4136 hypothetical protein; hypothetical protein complement(5000378..5001727) Mycobacterium vanbaalenii PYR-1 4649225 YP_955443.1 CDS Mvan_4662 NC_008726.1 5001730 5002527 R KEGG: mbo:Mb1115 short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase) (Z-farnesyl diphosphate synthase) (Z-FPP synthetase) (Z-farnesyl diphosphate synthetase) (geranyltranstransferase) (farnesyl pyrophosphate synthetase); TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(5001730..5002527) Mycobacterium vanbaalenii PYR-1 4649226 YP_955444.1 CDS Mvan_4663 NC_008726.1 5002578 5003309 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: mmc:Mmcs_4138 channel protein, hemolysin III family; hemolysin III family channel protein 5002578..5003309 Mycobacterium vanbaalenii PYR-1 4649227 YP_955445.1 CDS Mvan_4664 NC_008726.1 5003629 5004000 R PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_4139 nuclear transport factor 2; nuclear transport factor 2 complement(5003629..5004000) Mycobacterium vanbaalenii PYR-1 4649228 YP_955446.1 CDS Mvan_4665 NC_008726.1 5004011 5006014 R PFAM: protein of unknown function DUF255; KEGG: mmc:Mmcs_4140 protein of unknown function DUF255; Fis family transcriptional regulator complement(5004011..5006014) Mycobacterium vanbaalenii PYR-1 4649229 YP_955447.1 CDS Mvan_4666 NC_008726.1 5006001 5006297 R KEGG: mmc:Mmcs_4141 hypothetical protein; hypothetical protein complement(5006001..5006297) Mycobacterium vanbaalenii PYR-1 4649230 YP_955448.1 CDS Mvan_4667 NC_008726.1 5006294 5007166 R PFAM: LmbE family protein; KEGG: mmc:Mmcs_4142 LmbE-like protein; LmbE family protein complement(5006294..5007166) Mycobacterium vanbaalenii PYR-1 4649231 YP_955449.1 CDS greA NC_008726.1 5007935 5008429 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 5007935..5008429 Mycobacterium vanbaalenii PYR-1 4649232 YP_955450.1 CDS Mvan_4669 NC_008726.1 5008474 5009145 D KEGG: mmc:Mmcs_4145 hypothetical protein; hypothetical protein 5008474..5009145 Mycobacterium vanbaalenii PYR-1 4649233 YP_955451.1 CDS Mvan_4670 NC_008726.1 5009176 5010357 R catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase complement(5009176..5010357) Mycobacterium vanbaalenii PYR-1 4649234 YP_955452.1 CDS Mvan_4671 NC_008726.1 5010390 5011580 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4147 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5010390..5011580 Mycobacterium vanbaalenii PYR-1 4649235 YP_955453.1 CDS Mvan_4672 NC_008726.1 5011577 5012083 R PFAM: RDD domain containing protein; KEGG: mbo:Mb1107 probable proline-rich antigen homolog pra; RDD domain-containing protein complement(5011577..5012083) Mycobacterium vanbaalenii PYR-1 4649236 YP_955454.1 CDS Mvan_4673 NC_008726.1 5012173 5013144 R KEGG: mmc:Mmcs_4148 hypothetical protein; hypothetical protein complement(5012173..5013144) Mycobacterium vanbaalenii PYR-1 4649237 YP_955455.1 CDS Mvan_4674 NC_008726.1 5013588 5014982 R KEGG: mmc:Mmcs_4149 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cystathionine beta-synthase complement(5013588..5014982) Mycobacterium vanbaalenii PYR-1 4649238 YP_955456.1 CDS Mvan_4675 NC_008726.1 5015081 5016151 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_4150 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein complement(5015081..5016151) Mycobacterium vanbaalenii PYR-1 4649239 YP_955457.1 CDS Mvan_4676 NC_008726.1 5016345 5017307 D PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_4151 lipolytic enzyme, G-D-S-L; GDSL family lipase 5016345..5017307 Mycobacterium vanbaalenii PYR-1 4649240 YP_955458.1 CDS Mvan_4677 NC_008726.1 5017344 5018561 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5017344..5018561 Mycobacterium vanbaalenii PYR-1 4649241 YP_955459.1 CDS purT NC_008726.1 5018585 5019787 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 5018585..5019787 Mycobacterium vanbaalenii PYR-1 4649242 YP_955460.1 CDS Mvan_4679 NC_008726.1 5019919 5020770 R PFAM: protein of unknown function DUF1112; KEGG: mmc:Mmcs_4154 protein of unknown function DUF1112; hypothetical protein complement(5019919..5020770) Mycobacterium vanbaalenii PYR-1 4649243 YP_955461.1 CDS Mvan_4680 NC_008726.1 5020945 5021988 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 5020945..5021988 Mycobacterium vanbaalenii PYR-1 4649244 YP_955462.1 CDS Mvan_4681 NC_008726.1 5021991 5022773 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5021991..5022773 Mycobacterium vanbaalenii PYR-1 4649245 YP_955463.1 CDS Mvan_4682 NC_008726.1 5022783 5024495 D KEGG: mmc:Mmcs_4157 hypothetical protein; hypothetical protein 5022783..5024495 Mycobacterium vanbaalenii PYR-1 4649246 YP_955464.1 CDS Mvan_4683 NC_008726.1 5024492 5024860 R SMART: Rhodanese domain protein; KEGG: mmc:Mmcs_4167 rhodanese-like protein; rhodanese domain-containing protein complement(5024492..5024860) Mycobacterium vanbaalenii PYR-1 4649247 YP_955465.1 CDS Mvan_4684 NC_008726.1 5024860 5025375 R PFAM: cysteine dioxygenase type I; KEGG: mmc:Mmcs_4168 cysteine dioxygenase type I; cysteine dioxygenase type I complement(5024860..5025375) Mycobacterium vanbaalenii PYR-1 4648767 YP_955466.1 CDS Mvan_4685 NC_008726.1 5025490 5025930 D KEGG: mmc:Mmcs_4169 LpqV; LpqV 5025490..5025930 Mycobacterium vanbaalenii PYR-1 4648768 YP_955467.1 CDS Mvan_4686 NC_008726.1 5025980 5026771 R PFAM: regulatory protein, ArsR; Activator of Hsp90 ATPase 1 family protein; KEGG: nfa:nfa55010 putative transcriptional regulator; regulatory protein ArsR complement(5025980..5026771) Mycobacterium vanbaalenii PYR-1 4648769 YP_955468.1 CDS Mvan_4687 NC_008726.1 5026893 5027894 D PFAM: Patatin; KEGG: mmc:Mmcs_4170 patatin; patatin 5026893..5027894 Mycobacterium vanbaalenii PYR-1 4648770 YP_955469.1 CDS Mvan_4688 NC_008726.1 5027883 5028749 R PFAM: Patatin; KEGG: mmc:Mmcs_4171 patatin; patatin complement(5027883..5028749) Mycobacterium vanbaalenii PYR-1 4648771 YP_955470.1 CDS Mvan_4689 NC_008726.1 5028746 5029234 R KEGG: mbo:Mb1089 hypothetical protein; hypothetical protein complement(5028746..5029234) Mycobacterium vanbaalenii PYR-1 4648772 YP_955471.1 CDS Mvan_4690 NC_008726.1 5029306 5030148 R PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_6982 hypothetical protein; type 11 methyltransferase complement(5029306..5030148) Mycobacterium vanbaalenii PYR-1 4648773 YP_955472.1 CDS Mvan_4691 NC_008726.1 5030231 5030710 D PFAM: regulatory protein, MerR; KEGG: pae:PA5116 probable transcriptional regulator; MerR family transcriptional regulator 5030231..5030710 Mycobacterium vanbaalenii PYR-1 4648774 YP_955473.1 CDS Mvan_4692 NC_008726.1 5030726 5031787 R PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4173 dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(5030726..5031787) Mycobacterium vanbaalenii PYR-1 4648775 YP_955474.1 CDS Mvan_4693 NC_008726.1 5031958 5033682 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mtc:MT1304 serine/threonine protein kinase; protein kinase 5031958..5033682 Mycobacterium vanbaalenii PYR-1 4648776 YP_955475.1 CDS Mvan_4694 NC_008726.1 5033729 5034949 D KEGG: mbo:Mb2813c probable lipid-transfer protein Ltp1; lipid-transfer protein 5033729..5034949 Mycobacterium vanbaalenii PYR-1 4648777 YP_955476.1 CDS Mvan_4695 NC_008726.1 5035026 5035337 D KEGG: mmc:Mmcs_4207 hypothetical protein; hypothetical protein 5035026..5035337 Mycobacterium vanbaalenii PYR-1 4648778 YP_955477.1 CDS Mvan_4696 NC_008726.1 5035410 5036795 R PFAM: sodium:dicarboxylate symporter; KEGG: mmc:Mmcs_4176 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(5035410..5036795) Mycobacterium vanbaalenii PYR-1 4648779 YP_955478.1 CDS Mvan_4697 NC_008726.1 5036905 5038488 D PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_4177 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism 5036905..5038488 Mycobacterium vanbaalenii PYR-1 4648780 YP_955479.1 CDS Mvan_4698 NC_008726.1 5038485 5039174 D PFAM: response regulator receiver; KEGG: mmc:Mmcs_4178 response regulator receiver and unknown domain protein; response regulator receiver/unknown domain-containing protein 5038485..5039174 Mycobacterium vanbaalenii PYR-1 4648781 YP_955480.1 CDS Mvan_4699 NC_008726.1 5039192 5040283 R KEGG: mmc:Mmcs_4179 hypothetical protein; hypothetical protein complement(5039192..5040283) Mycobacterium vanbaalenii PYR-1 4648782 YP_955481.1 CDS Mvan_4700 NC_008726.1 5040744 5041151 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3405 hypothetical protein; anti-sigma-factor antagonist complement(5040744..5041151) Mycobacterium vanbaalenii PYR-1 4648783 YP_955482.1 CDS Mvan_4701 NC_008726.1 5041178 5041417 R PFAM: CsbD family protein; KEGG: mmc:Mmcs_2895 hypothetical protein; CsbD family protein complement(5041178..5041417) Mycobacterium vanbaalenii PYR-1 4648784 YP_955483.1 CDS Mvan_4702 NC_008726.1 5041519 5041857 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_5157 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(5041519..5041857) Mycobacterium vanbaalenii PYR-1 4648785 YP_955484.1 CDS Mvan_4703 NC_008726.1 5042086 5043564 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; KEGG: lin:lin0840 similar to Glutamine ABC transporter (binding and transport protein); polar amino acid ABC transporter inner membrane subunit 5042086..5043564 Mycobacterium vanbaalenii PYR-1 4648786 YP_955485.1 CDS Mvan_4704 NC_008726.1 5043561 5044334 D PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: lmf:LMOf2365_0865 glutamine ABC transporter, ATP-binding protein; ABC transporter--like protein 5043561..5044334 Mycobacterium vanbaalenii PYR-1 4648787 YP_955486.1 CDS Mvan_4705 NC_008726.1 5044469 5044765 D KEGG: mmc:Mmcs_4175 hypothetical protein; hypothetical protein 5044469..5044765 Mycobacterium vanbaalenii PYR-1 4648788 YP_955487.1 CDS Mvan_4706 NC_008726.1 5044945 5045295 D hypothetical protein 5044945..5045295 Mycobacterium vanbaalenii PYR-1 4648789 YP_955488.1 CDS Mvan_4707 NC_008726.1 5045401 5045649 D hypothetical protein 5045401..5045649 Mycobacterium vanbaalenii PYR-1 4648790 YP_955489.1 CDS Mvan_4708 NC_008726.1 5045632 5046417 R PFAM: protein of unknown function UPF0016; KEGG: nfa:nfa1160 hypothetical protein; hypothetical protein complement(5045632..5046417) Mycobacterium vanbaalenii PYR-1 4648791 YP_955490.1 CDS Mvan_4709 NC_008726.1 5046731 5047099 R KEGG: sco:SCO4433 integral membrane protein; integral membrane protein complement(5046731..5047099) Mycobacterium vanbaalenii PYR-1 4648968 YP_955491.1 CDS Mvan_4710 NC_008726.1 5047201 5048088 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: nfa:nfa26100 putative sigma factor; ECF subfamily RNA polymerase sigma-24 factor 5047201..5048088 Mycobacterium vanbaalenii PYR-1 4648969 YP_955492.1 CDS Mvan_4711 NC_008726.1 5048230 5048637 D KEGG: mmc:Mmcs_1256 hypothetical protein; hypothetical protein 5048230..5048637 Mycobacterium vanbaalenii PYR-1 4648970 YP_955493.1 CDS Mvan_4712 NC_008726.1 5048691 5049008 D TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO3442 hypothetical protein; glutaredoxin-like protein 5048691..5049008 Mycobacterium vanbaalenii PYR-1 4648971 YP_955494.1 CDS Mvan_4714 NC_008726.1 5049871 5050437 D hypothetical protein 5049871..5050437 Mycobacterium vanbaalenii PYR-1 4648973 YP_955495.1 CDS Mvan_4715 NC_008726.1 5050485 5050994 R KEGG: mbo:Mb1703 hypothetical protein; hypothetical protein complement(5050485..5050994) Mycobacterium vanbaalenii PYR-1 4648974 YP_955496.1 CDS Mvan_4716 NC_008726.1 5051766 5052065 D PFAM: protein of unknown function DUF732; KEGG: mbo:Mb1302c conserved hypothetical secreted protein; hypothetical protein 5051766..5052065 Mycobacterium vanbaalenii PYR-1 4648975 YP_955497.1 CDS Mvan_4717 NC_008726.1 5052093 5052515 R KEGG: mpa:MAP3905 hypothetical protein; hypothetical protein complement(5052093..5052515) Mycobacterium vanbaalenii PYR-1 4648976 YP_955498.1 CDS Mvan_4718 NC_008726.1 5052521 5052889 R KEGG: mpa:MAP3904 hypothetical protein; hypothetical protein complement(5052521..5052889) Mycobacterium vanbaalenii PYR-1 4648977 YP_955499.1 CDS Mvan_4719 NC_008726.1 5053049 5054368 R PFAM: Cl- channel, voltage-gated family protein; KEGG: mmc:Mmcs_4200 Cl-channel, voltage gated; Cl- channel voltage-gated family protein complement(5053049..5054368) Mycobacterium vanbaalenii PYR-1 4648978 YP_955500.1 CDS Mvan_4720 NC_008726.1 5054462 5055238 D PFAM: protein of unknown function DUF427; KEGG: mpa:MAP1006 hypothetical protein; hypothetical protein 5054462..5055238 Mycobacterium vanbaalenii PYR-1 4648979 YP_955501.1 CDS Mvan_4721 NC_008726.1 5055244 5055555 R KEGG: mmc:Mmcs_0054 hypothetical protein; hypothetical protein complement(5055244..5055555) Mycobacterium vanbaalenii PYR-1 4648980 YP_955502.1 CDS Mvan_4722 NC_008726.1 5055686 5057047 D PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3408 protein of unknown function UPF0089; hypothetical protein 5055686..5057047 Mycobacterium vanbaalenii PYR-1 4648981 YP_955503.1 CDS Mvan_4723 NC_008726.1 5057173 5058423 D PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein; hypothetical protein 5057173..5058423 Mycobacterium vanbaalenii PYR-1 4648982 YP_955504.1 CDS Mvan_4724 NC_008726.1 5058420 5059211 D PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: mmc:Mmcs_4186 peptidase M15D, VanX D-ala-D-ala dipeptidase; peptidase M15D, vanX D-ala-D-ala dipeptidase 5058420..5059211 Mycobacterium vanbaalenii PYR-1 4648983 YP_955505.1 CDS Mvan_4725 NC_008726.1 5059240 5060520 R KEGG: mmc:Mmcs_4699 hypothetical protein; hypothetical protein complement(5059240..5060520) Mycobacterium vanbaalenii PYR-1 4648984 YP_955506.1 CDS Mvan_4726 NC_008726.1 5060565 5062145 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_0419 PE-PPE-like protein; hypothetical protein complement(5060565..5062145) Mycobacterium vanbaalenii PYR-1 4648985 YP_955507.1 CDS Mvan_4727 NC_008726.1 5062342 5062632 R KEGG: mmc:Mmcs_1157 hypothetical protein; hypothetical protein complement(5062342..5062632) Mycobacterium vanbaalenii PYR-1 4648986 YP_955508.1 CDS Mvan_4728 NC_008726.1 5062980 5064044 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: sru:SRU_2653 3-beta hydroxysteroid dehydrogenase/isomerase family; hypothetical protein 5062980..5064044 Mycobacterium vanbaalenii PYR-1 4648987 YP_955509.1 CDS Mvan_4729 NC_008726.1 5064090 5064812 R PFAM: regulatory protein, TetR; KEGG: mlo:mlr0908 probable transcriptional regulator; TetR family transcriptional regulator complement(5064090..5064812) Mycobacterium vanbaalenii PYR-1 4648988 YP_955510.1 CDS Mvan_4730 NC_008726.1 5064825 5065262 R KEGG: mpa:MAP1744 hypothetical protein; hypothetical protein complement(5064825..5065262) Mycobacterium vanbaalenii PYR-1 4648989 YP_955511.1 CDS Mvan_4731 NC_008726.1 5065353 5065991 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cps:CPS_3939 pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent; pyridoxamine 5'-phosphate oxidase-like protein complement(5065353..5065991) Mycobacterium vanbaalenii PYR-1 4648990 YP_955512.1 CDS Mvan_4732 NC_008726.1 5066020 5066481 R PFAM: protein of unknown function DUF1348; KEGG: sma:SAV7472 hypothetical protein; hypothetical protein complement(5066020..5066481) Mycobacterium vanbaalenii PYR-1 4648991 YP_955513.1 CDS Mvan_4733 NC_008726.1 5066474 5067358 R PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO0461 hydrolase; alpha/beta hydrolase fold protein complement(5066474..5067358) Mycobacterium vanbaalenii PYR-1 4648992 YP_955514.1 CDS Mvan_4734 NC_008726.1 5067493 5068440 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rha:RHA1_ro04347 transcriptional regulator, LysR family; LysR family transcriptional regulator 5067493..5068440 Mycobacterium vanbaalenii PYR-1 4648993 YP_955515.1 CDS Mvan_4735 NC_008726.1 5068490 5069281 R hypothetical protein complement(5068490..5069281) Mycobacterium vanbaalenii PYR-1 4647741 YP_955516.1 CDS Mvan_4736 NC_008726.1 5069368 5073669 R TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: mag:amb1277 RTX toxins and related Ca2+-binding protein; putative outer membrane adhesin-like protein complement(5069368..5073669) Mycobacterium vanbaalenii PYR-1 4647742 YP_955517.1 CDS Mvan_4737 NC_008726.1 5074072 5074968 R KEGG: mmc:Mmcs_4705 hypothetical protein; hypothetical protein complement(5074072..5074968) Mycobacterium vanbaalenii PYR-1 4647743 YP_955518.1 CDS Mvan_4738 NC_008726.1 5075183 5075920 D KEGG: mmc:Mmcs_3233 putative conserved lipoprotein LppH; putative lipoprotein LppH 5075183..5075920 Mycobacterium vanbaalenii PYR-1 4647744 YP_955519.1 CDS Mvan_4739 NC_008726.1 5076761 5079136 D KEGG: sma:SAV967 glycosyl hydrolase; hypothetical protein 5076761..5079136 Mycobacterium vanbaalenii PYR-1 4647745 YP_955520.1 CDS Mvan_4740 NC_008726.1 5079231 5079551 R hypothetical protein complement(5079231..5079551) Mycobacterium vanbaalenii PYR-1 4647746 YP_955521.1 CDS Mvan_4741 NC_008726.1 5080127 5081446 D PFAM: transposase, mutator type; KEGG: mmc:Mmcs_5459 transposase, mutator type; transposase, mutator type 5080127..5081446 Mycobacterium vanbaalenii PYR-1 4647747 YP_955522.1 CDS Mvan_4743 NC_008726.1 5082095 5083360 D KEGG: mmc:Mmcs_1337 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 5082095..5083360 Mycobacterium vanbaalenii PYR-1 4647750 YP_955523.1 CDS Mvan_4744 NC_008726.1 5083366 5083677 R KEGG: mpa:MAP0383 hypothetical protein; hypothetical protein complement(5083366..5083677) Mycobacterium vanbaalenii PYR-1 4647751 YP_955524.1 CDS Mvan_4745 NC_008726.1 5083704 5084324 R KEGG: mmc:Mmcs_2527 hypothetical protein; hypothetical protein complement(5083704..5084324) Mycobacterium vanbaalenii PYR-1 4647752 YP_955525.1 CDS Mvan_4746 NC_008726.1 5084613 5084981 R KEGG: mpa:MAP0343 hypothetical protein; hypothetical protein complement(5084613..5084981) Mycobacterium vanbaalenii PYR-1 4647753 YP_955526.1 CDS Mvan_4747 NC_008726.1 5084986 5085243 R KEGG: cef:CE2609 hypothetical protein; hypothetical protein complement(5084986..5085243) Mycobacterium vanbaalenii PYR-1 4647754 YP_955527.1 CDS Mvan_4748 NC_008726.1 5085314 5086336 R KEGG: mpa:MAP3244 hypothetical protein; hypothetical protein complement(5085314..5086336) Mycobacterium vanbaalenii PYR-1 4647755 YP_955528.1 CDS Mvan_4749 NC_008726.1 5086415 5087596 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP3263c hypothetical protein; alcohol dehydrogenase complement(5086415..5087596) Mycobacterium vanbaalenii PYR-1 4647756 YP_955529.1 CDS Mvan_4750 NC_008726.1 5087751 5088323 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_1887 hemerythrin HHE cation binding region; hemerythrin HHE cation binding domain-containing protein 5087751..5088323 Mycobacterium vanbaalenii PYR-1 4647757 YP_955530.1 CDS Mvan_4751 NC_008726.1 5088335 5088841 D PFAM: flavin reductase domain protein, FMN-binding; KEGG: mpa:MAP1426c hypothetical protein; flavin reductase domain-containing protein 5088335..5088841 Mycobacterium vanbaalenii PYR-1 4647758 YP_955531.1 CDS Mvan_4752 NC_008726.1 5088847 5089551 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: mpa:MAP1425c hypothetical protein; hypothetical protein 5088847..5089551 Mycobacterium vanbaalenii PYR-1 4647759 YP_955532.1 CDS Mvan_4753 NC_008726.1 5089559 5090413 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1277 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5089559..5090413) Mycobacterium vanbaalenii PYR-1 4647760 YP_955533.1 CDS Mvan_4754 NC_008726.1 5090447 5090962 R KEGG: mpa:MAP0381 hypothetical protein; hypothetical protein complement(5090447..5090962) Mycobacterium vanbaalenii PYR-1 4647761 YP_955534.1 CDS Mvan_4755 NC_008726.1 5091077 5091355 D KEGG: mmc:Mmcs_4342 hypothetical protein; hypothetical protein 5091077..5091355 Mycobacterium vanbaalenii PYR-1 4647762 YP_955535.1 CDS Mvan_4756 NC_008726.1 5091431 5091691 D hypothetical protein 5091431..5091691 Mycobacterium vanbaalenii PYR-1 4647763 YP_955536.1 CDS Mvan_4757 NC_008726.1 5091705 5092376 R KEGG: mpa:MAP0986c putative diaminopimelate decarboxylase; hypothetical protein complement(5091705..5092376) Mycobacterium vanbaalenii PYR-1 4647764 YP_955537.1 CDS Mvan_4758 NC_008726.1 5092492 5092782 D hypothetical protein 5092492..5092782 Mycobacterium vanbaalenii PYR-1 4644083 YP_955538.1 CDS Mvan_4759 NC_008726.1 5092782 5094452 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 5092782..5094452 Mycobacterium vanbaalenii PYR-1 4644084 YP_955539.1 CDS Mvan_4760 NC_008726.1 5094452 5096596 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 5094452..5096596 Mycobacterium vanbaalenii PYR-1 4644085 YP_955540.1 CDS Mvan_4761 NC_008726.1 5096633 5097490 D PFAM: K+ transporting ATPase, KdpC subunit; KEGG: mmc:Mmcs_4228 K+ transporting ATPase, KdpC subunit; K+ transporting ATPase, KdpC subunit 5096633..5097490 Mycobacterium vanbaalenii PYR-1 4644086 YP_955541.1 CDS Mvan_4762 NC_008726.1 5097500 5100052 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: mmc:Mmcs_4229 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 5097500..5100052 Mycobacterium vanbaalenii PYR-1 4644087 YP_955542.1 CDS Mvan_4763 NC_008726.1 5100049 5100741 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4230 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5100049..5100741 Mycobacterium vanbaalenii PYR-1 4644088 YP_955543.1 CDS Mvan_4764 NC_008726.1 5100991 5101893 R PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT0142 epoxide hydrolase; alpha/beta hydrolase fold protein complement(5100991..5101893) Mycobacterium vanbaalenii PYR-1 4644089 YP_955544.1 CDS Mvan_4765 NC_008726.1 5101931 5103802 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4231 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5101931..5103802 Mycobacterium vanbaalenii PYR-1 4644090 YP_955545.1 CDS Mvan_4766 NC_008726.1 5103887 5104354 D KEGG: mmc:Mmcs_4233 hypothetical protein; hypothetical protein 5103887..5104354 Mycobacterium vanbaalenii PYR-1 4644091 YP_955546.1 CDS Mvan_4767 NC_008726.1 5104368 5104988 R KEGG: mbo:Mb2587 hypothetical protein; hypothetical protein complement(5104368..5104988) Mycobacterium vanbaalenii PYR-1 4644092 YP_955547.1 CDS Mvan_4768 NC_008726.1 5105091 5106038 R PFAM: Ppx/GppA phosphatase; KEGG: mmc:Mmcs_4237 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(5105091..5106038) Mycobacterium vanbaalenii PYR-1 4644093 YP_955548.1 CDS Mvan_4769 NC_008726.1 5106035 5106526 R PFAM: protein of unknown function DUF501; KEGG: mmc:Mmcs_4238 protein of unknown function DUF501; hypothetical protein complement(5106035..5106526) Mycobacterium vanbaalenii PYR-1 4644094 YP_955549.1 CDS Mvan_4770 NC_008726.1 5106519 5107274 R PFAM: Septum formation initiator; KEGG: mmc:Mmcs_4239 septum formation initiator; septum formation initiator complement(5106519..5107274) Mycobacterium vanbaalenii PYR-1 4644095 YP_955550.1 CDS eno NC_008726.1 5107278 5108567 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(5107278..5108567) Mycobacterium vanbaalenii PYR-1 4644096 YP_955551.1 CDS Mvan_4772 NC_008726.1 5108640 5109389 R KEGG: mmc:Mmcs_4241 putative conserved lipoprotein LpqU; putative lipoprotein LpqU complement(5108640..5109389) Mycobacterium vanbaalenii PYR-1 4644097 YP_955552.1 CDS Mvan_4773 NC_008726.1 5109570 5110481 D PFAM: iron permease FTR1; KEGG: rha:RHA1_ro05775 possible membrane protein; iron permease FTR1 5109570..5110481 Mycobacterium vanbaalenii PYR-1 4644098 YP_955553.1 CDS Mvan_4774 NC_008726.1 5110478 5111641 D PFAM: protein of unknown function DUF451; KEGG: rha:RHA1_ro05774 hypothetical protein; hypothetical protein 5110478..5111641 Mycobacterium vanbaalenii PYR-1 4644099 YP_955554.1 CDS Mvan_4775 NC_008726.1 5111622 5112935 D TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: sco:SCO2276 putative iron-dependent peroxidase; Dyp-type peroxidase family protein 5111622..5112935 Mycobacterium vanbaalenii PYR-1 4644100 YP_955555.1 CDS Mvan_4776 NC_008726.1 5112945 5113928 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(5112945..5113928) Mycobacterium vanbaalenii PYR-1 4644101 YP_955556.1 CDS Mvan_4777 NC_008726.1 5113925 5117563 R KEGG: mmc:Mmcs_4245 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor complement(5113925..5117563) Mycobacterium vanbaalenii PYR-1 4644102 YP_955557.1 CDS Mvan_4778 NC_008726.1 5117628 5118281 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4247 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5117628..5118281) Mycobacterium vanbaalenii PYR-1 4644103 YP_955558.1 CDS Mvan_4779 NC_008726.1 5118326 5119858 D KEGG: mmc:Mmcs_5234 putative DNA-binding protein; putative DNA-binding protein 5118326..5119858 Mycobacterium vanbaalenii PYR-1 4644104 YP_955559.1 CDS Mvan_4780 NC_008726.1 5119975 5121273 D PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5235 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 5119975..5121273 Mycobacterium vanbaalenii PYR-1 4644105 YP_955560.1 CDS Mvan_4781 NC_008726.1 5121355 5121834 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mmc:Mmcs_5236 GreA/GreB family elongation factor; GreA/GreB family elongation factor 5121355..5121834 Mycobacterium vanbaalenii PYR-1 4644106 YP_955561.1 CDS glmU NC_008726.1 5122092 5123570 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 5122092..5123570 Mycobacterium vanbaalenii PYR-1 4644108 YP_955562.1 CDS Mvan_4783 NC_008726.1 5123674 5124654 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 5123674..5124654 Mycobacterium vanbaalenii PYR-1 4646073 YP_955563.1 CDS Mvan_4784 NC_008726.1 5124655 5124996 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mmc:Mmcs_4250 arsenate reductase; arsenate reductase 5124655..5124996 Mycobacterium vanbaalenii PYR-1 4646074 YP_955564.1 CDS Mvan_4785 NC_008726.1 5124993 5125664 D KEGG: mmc:Mmcs_4251 lipoprotein, putative; putative lipoprotein 5124993..5125664 Mycobacterium vanbaalenii PYR-1 4646075 YP_955565.1 CDS Mvan_4786 NC_008726.1 5125750 5126616 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4252 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5125750..5126616 Mycobacterium vanbaalenii PYR-1 4646076 YP_955566.1 CDS Mvan_4787 NC_008726.1 5126762 5127418 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 5126762..5127418 Mycobacterium vanbaalenii PYR-1 4646077 YP_955567.1 CDS Mvan_4788 NC_008726.1 5127431 5128009 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 5127431..5128009 Mycobacterium vanbaalenii PYR-1 4646078 YP_955568.1 CDS Mvan_4789 NC_008726.1 5128090 5129121 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_4256 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(5128090..5129121) Mycobacterium vanbaalenii PYR-1 4646079 YP_955569.1 CDS Mvan_4790 NC_008726.1 5129454 5130557 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cvi:CV3501 flavoprotein NADH-dependent oxidoreductase; NADH:flavin oxidoreductase 5129454..5130557 Mycobacterium vanbaalenii PYR-1 4646080 YP_955570.1 CDS Mvan_4791 NC_008726.1 5130653 5131216 D PFAM: OsmC family protein; KEGG: gsu:GSU2788 hypothetical protein; OsmC family protein 5130653..5131216 Mycobacterium vanbaalenii PYR-1 4646081 YP_955571.1 CDS Mvan_4792 NC_008726.1 5131518 5132072 D PFAM: regulatory protein, TetR; KEGG: ava:Ava_4037 transcriptional regulator, TetR family; TetR family transcriptional regulator 5131518..5132072 Mycobacterium vanbaalenii PYR-1 4646082 YP_955572.1 CDS Mvan_4793 NC_008726.1 5132149 5132427 R hypothetical protein complement(5132149..5132427) Mycobacterium vanbaalenii PYR-1 4646083 YP_955573.1 CDS Mvan_4794 NC_008726.1 5132424 5132861 R hypothetical protein complement(5132424..5132861) Mycobacterium vanbaalenii PYR-1 4646084 YP_955574.1 CDS Mvan_4795 NC_008726.1 5132993 5133847 R PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_4259 ABC-2 type transporter; ABC-2 type transporter complement(5132993..5133847) Mycobacterium vanbaalenii PYR-1 4646085 YP_955575.1 CDS Mvan_4796 NC_008726.1 5133844 5134863 R KEGG: mmc:Mmcs_4260 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase subunit complement(5133844..5134863) Mycobacterium vanbaalenii PYR-1 4646086 YP_955576.1 CDS Mvan_4797 NC_008726.1 5134893 5136347 D PFAM: protein of unknown function DUF1222; KEGG: mpa:MAP3685c hypothetical protein; hypothetical protein 5134893..5136347 Mycobacterium vanbaalenii PYR-1 4646087 YP_955577.1 CDS Mvan_4798 NC_008726.1 5136458 5138092 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(5136458..5138092) Mycobacterium vanbaalenii PYR-1 4646088 YP_955578.1 CDS Mvan_4799 NC_008726.1 5138411 5139379 R catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(5138411..5139379) Mycobacterium vanbaalenii PYR-1 4646089 YP_955579.1 CDS ksgA NC_008726.1 5139464 5140399 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(5139464..5140399) Mycobacterium vanbaalenii PYR-1 4646090 YP_955580.1 CDS Mvan_4801 NC_008726.1 5140396 5141523 R PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: mmc:Mmcs_4264 transglycosylase-like protein; transglycosylase domain-containing protein complement(5140396..5141523) Mycobacterium vanbaalenii PYR-1 4646091 YP_955581.1 CDS Mvan_4802 NC_008726.1 5141606 5142457 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mpa:MAP0973 putative deoxyribonuclease; TatD family hydrolase complement(5141606..5142457) Mycobacterium vanbaalenii PYR-1 4646092 YP_955582.1 CDS Mvan_4803 NC_008726.1 5142484 5144019 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 5142484..5144019 Mycobacterium vanbaalenii PYR-1 4646093 YP_955583.1 CDS Mvan_4804 NC_008726.1 5144021 5145370 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 5144021..5145370 Mycobacterium vanbaalenii PYR-1 4646094 YP_955584.1 CDS Mvan_4805 NC_008726.1 5145468 5146643 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_4270 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5145468..5146643 Mycobacterium vanbaalenii PYR-1 4646095 YP_955585.1 CDS Mvan_4806 NC_008726.1 5146640 5147521 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_4271 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5146640..5147521 Mycobacterium vanbaalenii PYR-1 4646096 YP_955586.1 CDS Mvan_4807 NC_008726.1 5147529 5148791 D catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase component I 5147529..5148791 Mycobacterium vanbaalenii PYR-1 4646897 YP_955587.1 CDS Mvan_4808 NC_008726.1 5148761 5149597 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmc:Mmcs_4273 protein of unknown function UPF0011; uroporphyrin-III C/tetrapyrrole methyltransferase complement(5148761..5149597) Mycobacterium vanbaalenii PYR-1 4646898 YP_955588.1 CDS Mvan_4809 NC_008726.1 5149622 5151199 D PFAM: glycosyl transferase, family 39; KEGG: mmc:Mmcs_4274 glycosyl transferase, family 39; glycosyl transferase family protein 5149622..5151199 Mycobacterium vanbaalenii PYR-1 4646899 YP_955589.1 CDS Mvan_4810 NC_008726.1 5151276 5152484 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(5151276..5152484) Mycobacterium vanbaalenii PYR-1 4646900 YP_955590.1 CDS Mvan_4811 NC_008726.1 5152531 5152965 D TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_4277 transcriptional regulator, MerR family; MerR family transcriptional regulator 5152531..5152965 Mycobacterium vanbaalenii PYR-1 4646901 YP_955591.1 CDS Mvan_4812 NC_008726.1 5153049 5153657 D KEGG: mmc:Mmcs_4278 hypothetical protein; hypothetical protein 5153049..5153657 Mycobacterium vanbaalenii PYR-1 4646902 YP_955592.1 CDS Mvan_4813 NC_008726.1 5153659 5154333 R KEGG: mmc:Mmcs_4279 hypothetical protein; hypothetical protein complement(5153659..5154333) Mycobacterium vanbaalenii PYR-1 4646903 YP_955593.1 CDS Mvan_4814 NC_008726.1 5154362 5155015 R KEGG: mmc:Mmcs_4280 hypothetical protein; hypothetical protein complement(5154362..5155015) Mycobacterium vanbaalenii PYR-1 4646904 YP_955594.1 CDS Mvan_4815 NC_008726.1 5155059 5156612 R PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_4281 PE-PPE-like protein; hypothetical protein complement(5155059..5156612) Mycobacterium vanbaalenii PYR-1 4646905 YP_955595.1 CDS Mvan_4816 NC_008726.1 5156826 5157515 D KEGG: mmc:Mmcs_4282 LpqN; LpqN 5156826..5157515 Mycobacterium vanbaalenii PYR-1 4646906 YP_955596.1 CDS Mvan_4817 NC_008726.1 5157523 5158344 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(5157523..5158344) Mycobacterium vanbaalenii PYR-1 4646907 YP_955597.1 CDS Mvan_4818 NC_008726.1 5158341 5159339 R PFAM: cyclic nucleotide-binding; KEGG: mmc:Mmcs_4284 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(5158341..5159339) Mycobacterium vanbaalenii PYR-1 4646908 YP_955598.1 CDS Mvan_4819 NC_008726.1 5159502 5160584 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_4442 diguanylate cyclase; diguanylate cyclase 5159502..5160584 Mycobacterium vanbaalenii PYR-1 4646909 YP_955599.1 CDS Mvan_4820 NC_008726.1 5160607 5161032 D KEGG: bur:Bcep18194_B1171 hypothetical protein; hypothetical protein 5160607..5161032 Mycobacterium vanbaalenii PYR-1 4646910 YP_955600.1 CDS Mvan_4821 NC_008726.1 5161059 5161439 D PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0745c putative 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 5161059..5161439 Mycobacterium vanbaalenii PYR-1 4646911 YP_955601.1 CDS Mvan_4822 NC_008726.1 5161443 5162327 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0744c probable oxidoreductase; 3-hydroxyisobutyrate dehydrogenase 5161443..5162327 Mycobacterium vanbaalenii PYR-1 4646912 YP_955602.1 CDS Mvan_4823 NC_008726.1 5162375 5162866 D PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_2578 transcriptional regulator, MarR family; MarR family transcriptional regulator 5162375..5162866 Mycobacterium vanbaalenii PYR-1 4646913 YP_955603.1 CDS Mvan_4824 NC_008726.1 5162911 5163345 D KEGG: mmc:Mmcs_2577 hypothetical protein; hypothetical protein 5162911..5163345 Mycobacterium vanbaalenii PYR-1 4646914 YP_955604.1 CDS Mvan_4825 NC_008726.1 5163594 5163980 R PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2999 transcriptional regulator, ArsR family; regulatory protein ArsR complement(5163594..5163980) Mycobacterium vanbaalenii PYR-1 4646915 YP_955605.1 CDS Mvan_4826 NC_008726.1 5164052 5164531 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_2998 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5164052..5164531 Mycobacterium vanbaalenii PYR-1 4646916 YP_955606.1 CDS Mvan_4827 NC_008726.1 5164964 5166490 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein 5164964..5166490 Mycobacterium vanbaalenii PYR-1 4646917 YP_955607.1 CDS Mvan_4828 NC_008726.1 5166536 5166781 D hypothetical protein 5166536..5166781 Mycobacterium vanbaalenii PYR-1 4646918 YP_955608.1 CDS Mvan_4829 NC_008726.1 5166878 5168071 D KEGG: mbo:Mb3561c hypothetical protein; hypothetical protein 5166878..5168071 Mycobacterium vanbaalenii PYR-1 4646919 YP_955609.1 CDS Mvan_4830 NC_008726.1 5168246 5169346 R KEGG: mmc:Mmcs_4287 hypothetical protein; hypothetical protein complement(5168246..5169346) Mycobacterium vanbaalenii PYR-1 4646921 YP_955610.1 CDS Mvan_4831 NC_008726.1 5169491 5170156 R PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP0926 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 complement(5169491..5170156) Mycobacterium vanbaalenii PYR-1 4646397 YP_955611.1 CDS Mvan_4832 NC_008726.1 5170164 5171450 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: mmc:Mmcs_4289 MoeA-like, domain I and II; molybdenum cofactor synthesis domain-containing protein complement(5170164..5171450) Mycobacterium vanbaalenii PYR-1 4646398 YP_955612.1 CDS Mvan_4833 NC_008726.1 5171525 5172448 R PFAM: Nucleotidyl transferase; KEGG: mmc:Mmcs_4290 nucleotidyl transferase; nucleotidyl transferase complement(5171525..5172448) Mycobacterium vanbaalenii PYR-1 4646399 YP_955613.1 CDS Mvan_4834 NC_008726.1 5172514 5173122 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mmc:Mmcs_4291 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 5172514..5173122 Mycobacterium vanbaalenii PYR-1 4646400 YP_955614.1 CDS Mvan_4835 NC_008726.1 5173196 5173543 D TIGRFAM: putative regulatory protein, FmdB family; KEGG: mmc:Mmcs_4292 putative regulatory protein, FmdB; FmdB family regulatory protein 5173196..5173543 Mycobacterium vanbaalenii PYR-1 4646401 YP_955615.1 CDS Mvan_4836 NC_008726.1 5173617 5174270 D PFAM: SAF domain; KEGG: mtc:MT1019 hypothetical protein; SAF domain-containing protein 5173617..5174270 Mycobacterium vanbaalenii PYR-1 4646402 YP_955616.1 CDS Mvan_4837 NC_008726.1 5174324 5174677 R KEGG: mmc:Mmcs_4285 hypothetical protein; hypothetical protein complement(5174324..5174677) Mycobacterium vanbaalenii PYR-1 4646403 YP_955617.1 CDS mscL NC_008726.1 5175028 5175462 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 5175028..5175462 Mycobacterium vanbaalenii PYR-1 4646404 YP_955618.1 CDS Mvan_4839 NC_008726.1 5175529 5176158 R KEGG: mmc:Mmcs_4296 hypothetical protein; hypothetical protein complement(5175529..5176158) Mycobacterium vanbaalenii PYR-1 4646405 YP_955619.1 CDS Mvan_4840 NC_008726.1 5176277 5176906 R KEGG: mmc:Mmcs_4296 hypothetical protein; hypothetical protein complement(5176277..5176906) Mycobacterium vanbaalenii PYR-1 4646406 YP_955620.1 CDS Mvan_4841 NC_008726.1 5177626 5178153 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mmc:Mmcs_4298 molybdopterin binding domain protein; molybdenum cofactor synthesis domain-containing protein complement(5177626..5178153) Mycobacterium vanbaalenii PYR-1 4646407 YP_955621.1 CDS Mvan_4842 NC_008726.1 5178231 5179601 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mmc:Mmcs_4299 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap complement(5178231..5179601) Mycobacterium vanbaalenii PYR-1 4646408 YP_955622.1 CDS Mvan_4843 NC_008726.1 5179841 5181295 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_4300 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(5179841..5181295) Mycobacterium vanbaalenii PYR-1 4646409 YP_955623.1 CDS Mvan_4844 NC_008726.1 5181295 5181990 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4301 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(5181295..5181990) Mycobacterium vanbaalenii PYR-1 4646410 YP_955624.1 CDS rpmF NC_008726.1 5182057 5182230 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(5182057..5182230) Mycobacterium vanbaalenii PYR-1 4646411 YP_955625.1 CDS Mvan_4846 NC_008726.1 5182527 5184239 D PFAM: protein of unknown function DUF1446; KEGG: mmc:Mmcs_4304 protein of unknown function DUF1446; hypothetical protein 5182527..5184239 Mycobacterium vanbaalenii PYR-1 4646412 YP_955626.1 CDS Mvan_4847 NC_008726.1 5184236 5185396 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4305 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5184236..5185396 Mycobacterium vanbaalenii PYR-1 4646413 YP_955627.1 CDS Mvan_4848 NC_008726.1 5185393 5187042 D PFAM: carboxyl transferase; KEGG: mmc:Mmcs_4306 propionyl-CoA carboxylase; propionyl-CoA carboxylase 5185393..5187042 Mycobacterium vanbaalenii PYR-1 4646414 YP_955628.1 CDS Mvan_4849 NC_008726.1 5187134 5189104 D PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_4307 pyruvate carboxylase; carbamoyl-phosphate synthase ATP-binding subunit L 5187134..5189104 Mycobacterium vanbaalenii PYR-1 4646415 YP_955629.1 CDS Mvan_4850 NC_008726.1 5189101 5190258 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4308 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5189101..5190258 Mycobacterium vanbaalenii PYR-1 4646416 YP_955630.1 CDS Mvan_4851 NC_008726.1 5190260 5191081 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5190260..5191081 Mycobacterium vanbaalenii PYR-1 4646417 YP_955631.1 CDS Mvan_4852 NC_008726.1 5191206 5191802 D PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_4310 protein of unknown function DUF1707; hypothetical protein 5191206..5191802 Mycobacterium vanbaalenii PYR-1 4646418 YP_955632.1 CDS Mvan_4853 NC_008726.1 5191799 5193805 R SMART: von Willebrand factor, type A; KEGG: mmc:Mmcs_4313 von Willebrand factor, type A; von Willebrand factor, type A complement(5191799..5193805) Mycobacterium vanbaalenii PYR-1 4646419 YP_955633.1 CDS Mvan_4854 NC_008726.1 5193798 5195189 R KEGG: mmc:Mmcs_4314 putative magnesium chelatase; putative magnesium chelatase complement(5193798..5195189) Mycobacterium vanbaalenii PYR-1 4646420 YP_955634.1 CDS Mvan_4855 NC_008726.1 5195233 5195907 R hypothetical protein complement(5195233..5195907) Mycobacterium vanbaalenii PYR-1 4646421 YP_955635.1 CDS purH NC_008726.1 5195923 5197506 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(5195923..5197506) Mycobacterium vanbaalenii PYR-1 4643834 YP_955636.1 CDS purN NC_008726.1 5197503 5198159 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(5197503..5198159) Mycobacterium vanbaalenii PYR-1 4643835 YP_955637.1 CDS Mvan_4858 NC_008726.1 5198169 5199689 R KEGG: mmc:Mmcs_4321 hypothetical protein; hypothetical protein complement(5198169..5199689) Mycobacterium vanbaalenii PYR-1 4643836 YP_955638.1 CDS Mvan_4859 NC_008726.1 5199750 5200595 R KEGG: mmc:Mmcs_4322 hypothetical protein; hypothetical protein complement(5199750..5200595) Mycobacterium vanbaalenii PYR-1 4643837 YP_955639.1 CDS Mvan_4860 NC_008726.1 5200764 5201915 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_4323 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase complement(5200764..5201915) Mycobacterium vanbaalenii PYR-1 4643838 YP_955640.1 CDS Mvan_4861 NC_008726.1 5201959 5203089 R PFAM: glycoside hydrolase, family 8; KEGG: ade:Adeh_2031 glycosyl transferase, family 2; glycoside hydrolase family protein complement(5201959..5203089) Mycobacterium vanbaalenii PYR-1 4643839 YP_955641.1 CDS Mvan_4862 NC_008726.1 5203070 5205766 R PFAM: glycosyl transferase, family 39; KEGG: sma:SAV3294 hypothetical protein; glycosyl transferase family protein complement(5203070..5205766) Mycobacterium vanbaalenii PYR-1 4643840 YP_955642.1 CDS Mvan_4863 NC_008726.1 5205763 5207148 R PFAM: glycosyl transferase, family 2; KEGG: sma:SAV3295 glycosyl transferase; glycosyl transferase family protein complement(5205763..5207148) Mycobacterium vanbaalenii PYR-1 4643841 YP_955643.1 CDS Mvan_4864 NC_008726.1 5207653 5208501 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_4324 luciferase-like protein; luciferase family protein 5207653..5208501 Mycobacterium vanbaalenii PYR-1 4643842 YP_955644.1 CDS Mvan_4865 NC_008726.1 5208522 5209070 D KEGG: mpa:MAP0283c hypothetical protein; hypothetical protein 5208522..5209070 Mycobacterium vanbaalenii PYR-1 4643843 YP_955645.1 CDS Mvan_4866 NC_008726.1 5209067 5210596 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(5209067..5210596) Mycobacterium vanbaalenii PYR-1 4643844 YP_955646.1 CDS Mvan_4867 NC_008726.1 5210746 5211876 D KEGG: gvi:gll1120 unknown protein; hypothetical protein 5210746..5211876 Mycobacterium vanbaalenii PYR-1 4643845 YP_955647.1 CDS Mvan_4868 NC_008726.1 5211873 5212964 D PFAM: regulatory protein, MarR; PaaX domain protein; KEGG: gvi:gll1119 unknown protein; MarR family transcriptional regulator 5211873..5212964 Mycobacterium vanbaalenii PYR-1 4643846 YP_955648.1 CDS Mvan_4869 NC_008726.1 5213061 5213963 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(5213061..5213963) Mycobacterium vanbaalenii PYR-1 4643847 YP_955649.1 CDS sucC NC_008726.1 5213976 5215139 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(5213976..5215139) Mycobacterium vanbaalenii PYR-1 4643848 YP_955650.1 CDS Mvan_4871 NC_008726.1 5215391 5216437 D PFAM: peptidase M23B; KEGG: mmc:Mmcs_4328 peptidase M23B; peptidase M23B 5215391..5216437 Mycobacterium vanbaalenii PYR-1 4643849 YP_955651.1 CDS Mvan_4872 NC_008726.1 5216438 5216965 D KEGG: mmc:Mmcs_4329 hypothetical protein; hypothetical protein 5216438..5216965 Mycobacterium vanbaalenii PYR-1 4643850 YP_955652.1 CDS Mvan_4873 NC_008726.1 5216962 5219289 R TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_4330 ATP-dependent DNA helicase PcrA; ATP-dependent DNA helicase PcrA complement(5216962..5219289) Mycobacterium vanbaalenii PYR-1 4643851 YP_955653.1 CDS Mvan_4874 NC_008726.1 5219566 5219850 D TIGRFAM: chorismate mutase; KEGG: mmc:Mmcs_4331 chorismate mutase; chorismate mutase 5219566..5219850 Mycobacterium vanbaalenii PYR-1 4643852 YP_955654.1 CDS Mvan_4875 NC_008726.1 5219899 5221914 R PFAM: acyltransferase 3; KEGG: mmc:Mmcs_4332 acyltransferase 3; acyltransferase 3 complement(5219899..5221914) Mycobacterium vanbaalenii PYR-1 4643853 YP_955655.1 CDS Mvan_4876 NC_008726.1 5222083 5223531 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4333 succinate-semialdehyde dehydrogenase (NAD(P)+); succinate-semialdehyde dehydrogenase (NAD(P)(+)) complement(5222083..5223531) Mycobacterium vanbaalenii PYR-1 4643854 YP_955656.1 CDS pgi NC_008726.1 5223582 5225243 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 5223582..5225243 Mycobacterium vanbaalenii PYR-1 4643855 YP_955657.1 CDS Mvan_4878 NC_008726.1 5225293 5225820 R KEGG: nfa:nfa35340 hypothetical protein; hypothetical protein complement(5225293..5225820) Mycobacterium vanbaalenii PYR-1 4643856 YP_955658.1 CDS Mvan_4879 NC_008726.1 5225813 5226106 R PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa35330 putative DNA-binding protein; XRE family transcriptional regulator complement(5225813..5226106) Mycobacterium vanbaalenii PYR-1 4643857 YP_955659.1 CDS Mvan_4880 NC_008726.1 5226204 5227556 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_4936 cytochrome P450; cytochrome P450 complement(5226204..5227556) Mycobacterium vanbaalenii PYR-1 4643858 YP_955660.1 CDS Mvan_4881 NC_008726.1 5227617 5228366 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0890 putative short-chain type dehydrogenase/reductase; short chain dehydrogenase complement(5227617..5228366) Mycobacterium vanbaalenii PYR-1 4643859 YP_955661.1 CDS Mvan_4882 NC_008726.1 5228534 5229796 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_0130 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein complement(5228534..5229796) Mycobacterium vanbaalenii PYR-1 4648815 YP_955662.1 CDS Mvan_4883 NC_008726.1 5230078 5230971 R PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mmc:Mmcs_4336 DNA-formamidopyrimidine glycosylase; DNA-formamidopyrimidine glycosylase complement(5230078..5230971) Mycobacterium vanbaalenii PYR-1 4648816 YP_955663.1 CDS Mvan_4884 NC_008726.1 5230975 5231358 R PFAM: membrane protein of unknown function; KEGG: mpa:MAP1628 hypothetical protein; hypothetical protein complement(5230975..5231358) Mycobacterium vanbaalenii PYR-1 4648817 YP_955664.1 CDS Mvan_4885 NC_008726.1 5231455 5232327 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_4343 hypothetical protein; luciferase family protein 5231455..5232327 Mycobacterium vanbaalenii PYR-1 4648818 YP_955665.1 CDS Mvan_4886 NC_008726.1 5232328 5233563 R PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mmc:Mmcs_3573 glycosyltransferase, MGT family; UDP-glucuronosyl/UDP-glucosyltransferase complement(5232328..5233563) Mycobacterium vanbaalenii PYR-1 4648819 YP_955666.1 CDS Mvan_4887 NC_008726.1 5233793 5234503 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_5079 methyltransferase type 12; type 11 methyltransferase 5233793..5234503 Mycobacterium vanbaalenii PYR-1 4648820 YP_955667.1 CDS Mvan_4888 NC_008726.1 5234513 5235691 R PFAM: ROK family protein; KEGG: rxy:Rxyl_0399 ROK domain containing protein; ROK family protein complement(5234513..5235691) Mycobacterium vanbaalenii PYR-1 4648821 YP_955668.1 CDS Mvan_4889 NC_008726.1 5235769 5236431 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: sco:SCO2298 KHG/KDPG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 5235769..5236431 Mycobacterium vanbaalenii PYR-1 4648822 YP_955669.1 CDS Mvan_4890 NC_008726.1 5236428 5237639 D PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06239 probable sugar efflux transporter, MFS superfamily; major facilitator superfamily transporter 5236428..5237639 Mycobacterium vanbaalenii PYR-1 4648823 YP_955670.1 CDS Mvan_4891 NC_008726.1 5237674 5238852 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(5237674..5238852) Mycobacterium vanbaalenii PYR-1 4648824 YP_955671.1 CDS Mvan_4892 NC_008726.1 5238852 5239508 R KEGG: sco:SCO6702 putative 3-oxoadipate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(5238852..5239508) Mycobacterium vanbaalenii PYR-1 4648825 YP_955672.1 CDS Mvan_4893 NC_008726.1 5239508 5240272 R KEGG: mbo:Mb2532c probable succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA (3-oxo acid:CoA transferase) (OXCT A) (succinyl-CoA:3-oxoacid-coenzyme A transferase); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(5239508..5240272) Mycobacterium vanbaalenii PYR-1 4648826 YP_955673.1 CDS Mvan_4894 NC_008726.1 5240442 5241203 D PFAM: regulatory proteins, IclR; KEGG: sme:SMc00263 putative transcription regulator protein; regulatory proteins IclR 5240442..5241203 Mycobacterium vanbaalenii PYR-1 4648827 YP_955674.1 CDS Mvan_4895 NC_008726.1 5241381 5243228 R PFAM: helix-turn-helix, Fis-type; GAF domain protein; KEGG: fra:Francci3_2510 putative transcriptional regulator, fis family; Fis family transcriptional regulator complement(5241381..5243228) Mycobacterium vanbaalenii PYR-1 4648828 YP_955675.1 CDS Mvan_4896 NC_008726.1 5243417 5245321 D PFAM: Hydantoinase/oxoprolinase; KEGG: fra:Francci3_2509 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 5243417..5245321 Mycobacterium vanbaalenii PYR-1 4648829 YP_955676.1 CDS Mvan_4897 NC_008726.1 5245352 5245780 D KEGG: fra:Francci3_2508 putative acetone carboxylase gamma subunit; putative acetone carboxylase subunit gamma 5245352..5245780 Mycobacterium vanbaalenii PYR-1 4648830 YP_955677.1 CDS Mvan_4898 NC_008726.1 5245815 5247944 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: fra:Francci3_2507 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 5245815..5247944 Mycobacterium vanbaalenii PYR-1 4648831 YP_955678.1 CDS Mvan_4899 NC_008726.1 5247973 5250285 D PFAM: Hydantoinase B/oxoprolinase; KEGG: fra:Francci3_2506 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 5247973..5250285 Mycobacterium vanbaalenii PYR-1 4648832 YP_955679.1 CDS Mvan_4900 NC_008726.1 5250344 5251138 D KEGG: fra:Francci3_2505 conserved hypothetical protein; hypothetical protein 5250344..5251138 Mycobacterium vanbaalenii PYR-1 4648833 YP_955680.1 CDS Mvan_4901 NC_008726.1 5251231 5252313 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1073 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 5251231..5252313 Mycobacterium vanbaalenii PYR-1 4648834 YP_955681.1 CDS Mvan_4902 NC_008726.1 5252375 5253181 R KEGG: bja:blr7741 hypothetical protein; hypothetical protein complement(5252375..5253181) Mycobacterium vanbaalenii PYR-1 4648835 YP_955682.1 CDS Mvan_4903 NC_008726.1 5253284 5253934 R hypothetical protein complement(5253284..5253934) Mycobacterium vanbaalenii PYR-1 4648836 YP_955683.1 CDS Mvan_4904 NC_008726.1 5254003 5254647 D KEGG: mmc:Mmcs_4349 hypothetical protein; hypothetical protein 5254003..5254647 Mycobacterium vanbaalenii PYR-1 4648837 YP_955684.1 CDS rnhA NC_008726.1 5254644 5255108 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 5254644..5255108 Mycobacterium vanbaalenii PYR-1 4648838 YP_955685.1 CDS mhpA NC_008726.1 5255128 5256663 R catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase complement(5255128..5256663) Mycobacterium vanbaalenii PYR-1 4648839 YP_955686.1 CDS Mvan_4907 NC_008726.1 5256740 5257678 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sma:SAV564 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; fumarylacetoacetate (FAA) hydrolase complement(5256740..5257678) Mycobacterium vanbaalenii PYR-1 4648840 YP_955687.1 CDS Mvan_4908 NC_008726.1 5257675 5258808 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV565 2,3-dihydroxybiphenyl-1,2-dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(5257675..5258808) Mycobacterium vanbaalenii PYR-1 4648841 YP_955688.1 CDS Mvan_4909 NC_008726.1 5258930 5259643 D PFAM: regulatory protein, TetR; KEGG: sma:SAV566 TetR-family transcriptional regulator; TetR family transcriptional regulator 5258930..5259643 Mycobacterium vanbaalenii PYR-1 4648842 YP_955689.1 CDS Mvan_4910 NC_008726.1 5259680 5260852 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP0933 hypothetical protein; Rieske (2Fe-2S) domain-containing protein complement(5259680..5260852) Mycobacterium vanbaalenii PYR-1 4648843 YP_955690.1 CDS Mvan_4911 NC_008726.1 5260967 5261587 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP0932c hypothetical protein; TetR family transcriptional regulator 5260967..5261587 Mycobacterium vanbaalenii PYR-1 4648844 YP_955691.1 CDS Mvan_4912 NC_008726.1 5261671 5263197 R PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein complement(5261671..5263197) Mycobacterium vanbaalenii PYR-1 4648845 YP_955692.1 CDS Mvan_4913 NC_008726.1 5263449 5263907 R PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_5323 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(5263449..5263907) Mycobacterium vanbaalenii PYR-1 4648846 YP_955693.1 CDS Mvan_4914 NC_008726.1 5263992 5264984 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mxa:MXAN_5850 NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 5263992..5264984 Mycobacterium vanbaalenii PYR-1 4648847 YP_955694.1 CDS Mvan_4915 NC_008726.1 5264986 5267277 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; ATP-dependent DNA ligase complement(5264986..5267277) Mycobacterium vanbaalenii PYR-1 4648848 YP_955695.1 CDS Mvan_4916 NC_008726.1 5267319 5268248 D PFAM: PfkB domain protein; KEGG: mmc:Mmcs_4360 PfkB; ribokinase-like domain-containing protein 5267319..5268248 Mycobacterium vanbaalenii PYR-1 4648849 YP_955696.1 CDS Mvan_4917 NC_008726.1 5268248 5269168 D PFAM: Ku domain protein; KEGG: mmc:Mmcs_4361 Ku domain containing protein; Ku domain-containing protein 5268248..5269168 Mycobacterium vanbaalenii PYR-1 4648850 YP_955697.1 CDS Mvan_4918 NC_008726.1 5269501 5269785 D hypothetical protein 5269501..5269785 Mycobacterium vanbaalenii PYR-1 4648851 YP_955698.1 CDS Mvan_4919 NC_008726.1 5269924 5270304 D KEGG: mmc:Mmcs_4594 hypothetical protein; hypothetical protein 5269924..5270304 Mycobacterium vanbaalenii PYR-1 4648852 YP_955699.1 CDS Mvan_4920 NC_008726.1 5270458 5270829 D KEGG: mmc:Mmcs_4595 hypothetical protein; hypothetical protein 5270458..5270829 Mycobacterium vanbaalenii PYR-1 4648853 YP_955700.1 CDS Mvan_4921 NC_008726.1 5270948 5271769 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0871c 7-alpha-hydroxysteroid dehydrogenase; short chain dehydrogenase 5270948..5271769 Mycobacterium vanbaalenii PYR-1 4648854 YP_955701.1 CDS Mvan_4922 NC_008726.1 5271781 5272857 D PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase, NAD-binding; KEGG: mpa:MAP0870c hypothetical protein; dihydrodipicolinate reductase 5271781..5272857 Mycobacterium vanbaalenii PYR-1 4648855 YP_955702.1 CDS Mvan_4923 NC_008726.1 5272882 5273130 D KEGG: mmc:Mmcs_4365 hypothetical protein; hypothetical protein 5272882..5273130 Mycobacterium vanbaalenii PYR-1 4648856 YP_955703.1 CDS Mvan_4924 NC_008726.1 5273143 5273382 D hypothetical protein 5273143..5273382 Mycobacterium vanbaalenii PYR-1 4648857 YP_955704.1 CDS Mvan_4925 NC_008726.1 5273413 5274489 D PFAM: protein of unknown function DUF867; KEGG: mmc:Mmcs_4367 protein of unknown function DUF867; hypothetical protein 5273413..5274489 Mycobacterium vanbaalenii PYR-1 4648858 YP_955705.1 CDS Mvan_4926 NC_008726.1 5274611 5275420 D PFAM: protein of unknown function DUF1365; KEGG: mmc:Mmcs_4370 protein of unknown function DUF1365; hypothetical protein 5274611..5275420 Mycobacterium vanbaalenii PYR-1 4648859 YP_955706.1 CDS Mvan_4927 NC_008726.1 5275417 5276007 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins; RNA polymerase sigma factor SigK 5275417..5276007 Mycobacterium vanbaalenii PYR-1 4648860 YP_955707.1 CDS Mvan_4928 NC_008726.1 5276004 5276720 D KEGG: mmc:Mmcs_4372 hypothetical protein; hypothetical protein 5276004..5276720 Mycobacterium vanbaalenii PYR-1 4648861 YP_955708.1 CDS Mvan_4929 NC_008726.1 5276717 5277814 R ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase complement(5276717..5277814) Mycobacterium vanbaalenii PYR-1 4648862 YP_955709.1 CDS Mvan_4930 NC_008726.1 5277953 5278777 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_4374 luciferase-like protein; luciferase family protein 5277953..5278777 Mycobacterium vanbaalenii PYR-1 4648863 YP_955710.1 CDS Mvan_4931 NC_008726.1 5278800 5279069 R KEGG: mmc:Mmcs_4375 hypothetical protein; hypothetical protein complement(5278800..5279069) Mycobacterium vanbaalenii PYR-1 4648864 YP_955711.1 CDS Mvan_4932 NC_008726.1 5279070 5279651 R PFAM: cytochrome c oxidase, subunit III; KEGG: mmc:Mmcs_4376 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(5279070..5279651) Mycobacterium vanbaalenii PYR-1 4648865 YP_955712.1 CDS Mvan_4933 NC_008726.1 5279648 5280472 R KEGG: mmc:Mmcs_4377 hypothetical protein; hypothetical protein complement(5279648..5280472) Mycobacterium vanbaalenii PYR-1 4648917 YP_955713.1 CDS Mvan_4934 NC_008726.1 5280645 5281097 R PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV6757 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(5280645..5281097) Mycobacterium vanbaalenii PYR-1 4648919 YP_955714.1 CDS Mvan_4935 NC_008726.1 5281094 5281513 R PFAM: regulatory protein, MerR; KEGG: bam:Bamb_1782 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(5281094..5281513) Mycobacterium vanbaalenii PYR-1 4648920 YP_955715.1 CDS Mvan_4936 NC_008726.1 5282055 5282417 D KEGG: mmc:Mmcs_4595 hypothetical protein; hypothetical protein 5282055..5282417 Mycobacterium vanbaalenii PYR-1 4648921 YP_955716.1 CDS Mvan_4938 NC_008726.1 5282892 5283578 R PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_4379 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(5282892..5283578) Mycobacterium vanbaalenii PYR-1 4648923 YP_955717.1 CDS Mvan_4939 NC_008726.1 5283769 5284986 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5283769..5284986 Mycobacterium vanbaalenii PYR-1 4648924 YP_955718.1 CDS Mvan_4940 NC_008726.1 5284983 5286596 D PFAM: Carotenoid oxygenase; KEGG: mtc:MT0938 dioxygenase, putative; carotenoid oxygenase 5284983..5286596 Mycobacterium vanbaalenii PYR-1 4648925 YP_955719.1 CDS Mvan_4941 NC_008726.1 5286597 5287484 D PFAM: helix-turn-helix, HxlR type; KEGG: mmc:Mmcs_3097 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 5286597..5287484 Mycobacterium vanbaalenii PYR-1 4648926 YP_955720.1 CDS Mvan_4942 NC_008726.1 5287505 5288065 D PFAM: isochorismatase hydrolase; KEGG: cvi:CV4239 probable amidase from nicotinamidase family; isochorismatase hydrolase 5287505..5288065 Mycobacterium vanbaalenii PYR-1 4648927 YP_955721.1 CDS Mvan_4943 NC_008726.1 5288167 5288616 D PFAM: heat shock protein Hsp20; KEGG: mmc:Mmcs_4380 heat shock protein HSP20; heat shock protein Hsp20 5288167..5288616 Mycobacterium vanbaalenii PYR-1 4648928 YP_955722.1 CDS Mvan_4944 NC_008726.1 5288626 5289222 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc0997 hypothetical protein; N-acetyltransferase GCN5 complement(5288626..5289222) Mycobacterium vanbaalenii PYR-1 4648929 YP_955723.1 CDS Mvan_4945 NC_008726.1 5289219 5289650 R KEGG: mmc:Mmcs_4381 hypothetical protein; hypothetical protein complement(5289219..5289650) Mycobacterium vanbaalenii PYR-1 4648930 YP_955724.1 CDS Mvan_4946 NC_008726.1 5289676 5290122 D PFAM: protein of unknown function DUF985; KEGG: mmc:Mmcs_4382 protein of unknown function DUF985; hypothetical protein 5289676..5290122 Mycobacterium vanbaalenii PYR-1 4648931 YP_955725.1 CDS Mvan_4947 NC_008726.1 5290112 5290918 R PFAM: protein of unknown function DUF849; KEGG: mmc:Mmcs_4383 protein of unknown function DUF849; hypothetical protein complement(5290112..5290918) Mycobacterium vanbaalenii PYR-1 4648932 YP_955726.1 CDS Mvan_4948 NC_008726.1 5290992 5291930 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 12; KEGG: mmc:Mmcs_0787 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5290992..5291930 Mycobacterium vanbaalenii PYR-1 4648933 YP_955727.1 CDS Mvan_4949 NC_008726.1 5292009 5292905 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0786 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5292009..5292905 Mycobacterium vanbaalenii PYR-1 4648934 YP_955728.1 CDS Mvan_4950 NC_008726.1 5292915 5294150 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(5292915..5294150) Mycobacterium vanbaalenii PYR-1 4648935 YP_955729.1 CDS Mvan_4951 NC_008726.1 5294319 5295161 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb0935 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(5294319..5295161) Mycobacterium vanbaalenii PYR-1 4648936 YP_955730.1 CDS Mvan_4952 NC_008726.1 5295231 5296133 R PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_4394 amidohydrolase 2; amidohydrolase 2 complement(5295231..5296133) Mycobacterium vanbaalenii PYR-1 4648937 YP_955731.1 CDS Mvan_4953 NC_008726.1 5296202 5297626 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4395 aldehyde dehydrogenase; aldehyde dehydrogenase complement(5296202..5297626) Mycobacterium vanbaalenii PYR-1 4648938 YP_955732.1 CDS Mvan_4954 NC_008726.1 5297654 5299375 R PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mmc:Mmcs_4396 thiamine pyrophosphate enzyme-like TPP-binding protein; thiamine pyrophosphate binding domain-containing protein complement(5297654..5299375) Mycobacterium vanbaalenii PYR-1 4648939 YP_955733.1 CDS Mvan_4955 NC_008726.1 5299372 5300367 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4397 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5299372..5300367) Mycobacterium vanbaalenii PYR-1 4648940 YP_955734.1 CDS Mvan_4956 NC_008726.1 5300364 5301578 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4398 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5300364..5301578) Mycobacterium vanbaalenii PYR-1 4648941 YP_955735.1 CDS Mvan_4957 NC_008726.1 5301613 5302530 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4401 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5301613..5302530) Mycobacterium vanbaalenii PYR-1 4648285 YP_955736.1 CDS Mvan_4958 NC_008726.1 5302527 5303705 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4402 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5302527..5303705) Mycobacterium vanbaalenii PYR-1 4648286 YP_955737.1 CDS Mvan_4959 NC_008726.1 5303715 5304860 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4403 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(5303715..5304860) Mycobacterium vanbaalenii PYR-1 4648287 YP_955738.1 CDS Mvan_4960 NC_008726.1 5304897 5305844 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4404 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5304897..5305844) Mycobacterium vanbaalenii PYR-1 4648288 YP_955739.1 CDS Mvan_4961 NC_008726.1 5305837 5307678 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_4405 cyclohexanone monooxygenase; FAD dependent oxidoreductase complement(5305837..5307678) Mycobacterium vanbaalenii PYR-1 4648289 YP_955740.1 CDS Mvan_4962 NC_008726.1 5307748 5309121 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4406 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(5307748..5309121) Mycobacterium vanbaalenii PYR-1 4648290 YP_955741.1 CDS Mvan_4963 NC_008726.1 5309121 5309975 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4407 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5309121..5309975) Mycobacterium vanbaalenii PYR-1 4648291 YP_955742.1 CDS Mvan_4964 NC_008726.1 5310115 5311704 D PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat; SMP-30/gluconolaconase/LRE domain-containing protein 5310115..5311704 Mycobacterium vanbaalenii PYR-1 4648292 YP_955743.1 CDS Mvan_4965 NC_008726.1 5311701 5312444 D PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_4409 transcriptional regulator, GntR family; regulatory protein GntR 5311701..5312444 Mycobacterium vanbaalenii PYR-1 4648293 YP_955744.1 CDS Mvan_4966 NC_008726.1 5312441 5313952 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4410 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5312441..5313952 Mycobacterium vanbaalenii PYR-1 4648294 YP_955745.1 CDS Mvan_4967 NC_008726.1 5313954 5314718 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4411 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5313954..5314718 Mycobacterium vanbaalenii PYR-1 4648295 YP_955746.1 CDS Mvan_4968 NC_008726.1 5314715 5316184 D PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4412 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5314715..5316184 Mycobacterium vanbaalenii PYR-1 4648296 YP_955747.1 CDS Mvan_4969 NC_008726.1 5316190 5316597 R KEGG: xac:XAC2195 hypothetical protein; hypothetical protein complement(5316190..5316597) Mycobacterium vanbaalenii PYR-1 4648297 YP_955748.1 CDS Mvan_4970 NC_008726.1 5316672 5317745 R PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4413 hypothetical protein; dihydrodipicolinate reductase complement(5316672..5317745) Mycobacterium vanbaalenii PYR-1 4648298 YP_955749.1 CDS Mvan_4971 NC_008726.1 5317764 5318552 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4414 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5317764..5318552) Mycobacterium vanbaalenii PYR-1 4648299 YP_955750.1 CDS Mvan_4972 NC_008726.1 5318764 5319486 D KEGG: mmc:Mmcs_4415 hypothetical protein; hypothetical protein 5318764..5319486 Mycobacterium vanbaalenii PYR-1 4648300 YP_955751.1 CDS Mvan_4973 NC_008726.1 5319538 5320143 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4416 transcriptional regulator, TetR family; TetR family transcriptional regulator 5319538..5320143 Mycobacterium vanbaalenii PYR-1 4648301 YP_955752.1 CDS Mvan_4974 NC_008726.1 5320292 5321824 D KEGG: mmc:Mmcs_4417 MorD; MorD protein 5320292..5321824 Mycobacterium vanbaalenii PYR-1 4648302 YP_955753.1 CDS Mvan_4975 NC_008726.1 5321821 5322624 D PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_4418 ATPase associated with various cellular activities, AAA_5; ATPase 5321821..5322624 Mycobacterium vanbaalenii PYR-1 4648303 YP_955754.1 CDS Mvan_4976 NC_008726.1 5322639 5322770 D hypothetical protein 5322639..5322770 Mycobacterium vanbaalenii PYR-1 4648304 YP_955755.1 CDS Mvan_4977 NC_008726.1 5322767 5323501 D KEGG: mmc:Mmcs_4419 hypothetical protein; hypothetical protein 5322767..5323501 Mycobacterium vanbaalenii PYR-1 4648305 YP_955756.1 CDS Mvan_4978 NC_008726.1 5323514 5323942 D KEGG: mmc:Mmcs_4420 hypothetical protein; hypothetical protein 5323514..5323942 Mycobacterium vanbaalenii PYR-1 4648306 YP_955757.1 CDS Mvan_4979 NC_008726.1 5323939 5325159 D PFAM: cytochrome P450; KEGG: tfu:Tfu_1274 hypothetical protein; cytochrome P450 5323939..5325159 Mycobacterium vanbaalenii PYR-1 4648307 YP_955758.1 CDS Mvan_4980 NC_008726.1 5325156 5326208 D PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP0332 hypothetical protein; dihydrodipicolinate reductase 5325156..5326208 Mycobacterium vanbaalenii PYR-1 4648308 YP_955759.1 CDS Mvan_4981 NC_008726.1 5326220 5327278 D PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4421 dihydrodipicolinate reductase; dihydrodipicolinate reductase 5326220..5327278 Mycobacterium vanbaalenii PYR-1 4648309 YP_955760.1 CDS Mvan_4982 NC_008726.1 5327275 5327691 D hypothetical protein 5327275..5327691 Mycobacterium vanbaalenii PYR-1 4645045 YP_955761.1 CDS Mvan_4983 NC_008726.1 5327688 5328851 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_4422 cytochrome P450; cytochrome P450 5327688..5328851 Mycobacterium vanbaalenii PYR-1 4645046 YP_955762.1 CDS Mvan_4984 NC_008726.1 5328848 5330077 D PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein; cytochrome P450 5328848..5330077 Mycobacterium vanbaalenii PYR-1 4645047 YP_955763.1 CDS Mvan_4985 NC_008726.1 5330074 5330640 D KEGG: ddi:DDB0190993 hypothetical protein; hypothetical protein 5330074..5330640 Mycobacterium vanbaalenii PYR-1 4645048 YP_955764.1 CDS Mvan_4986 NC_008726.1 5330646 5331305 D KEGG: mmc:Mmcs_4424 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5330646..5331305 Mycobacterium vanbaalenii PYR-1 4645049 YP_955765.1 CDS Mvan_4987 NC_008726.1 5331327 5331773 R KEGG: mmc:Mmcs_4426 hypothetical protein; hypothetical protein complement(5331327..5331773) Mycobacterium vanbaalenii PYR-1 4645050 YP_955766.1 CDS Mvan_4988 NC_008726.1 5331786 5332058 R KEGG: mpa:MAP0844 hypothetical protein; hypothetical protein complement(5331786..5332058) Mycobacterium vanbaalenii PYR-1 4645051 YP_955767.1 CDS Mvan_4989 NC_008726.1 5332069 5334504 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_4428 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; P-type HAD superfamily ATPase complement(5332069..5334504) Mycobacterium vanbaalenii PYR-1 4645052 YP_955768.1 CDS Mvan_4990 NC_008726.1 5334501 5336096 R PFAM: beta-lactamase; KEGG: mmc:Mmcs_4429 beta-lactamase; beta-lactamase complement(5334501..5336096) Mycobacterium vanbaalenii PYR-1 4645053 YP_955769.1 CDS Mvan_4991 NC_008726.1 5336125 5337240 R KEGG: mmc:Mmcs_4430 hypothetical protein; hypothetical protein complement(5336125..5337240) Mycobacterium vanbaalenii PYR-1 4645054 YP_955770.1 CDS Mvan_4992 NC_008726.1 5337240 5337980 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(5337240..5337980) Mycobacterium vanbaalenii PYR-1 4645055 YP_955771.1 CDS Mvan_4993 NC_008726.1 5338001 5339473 D PFAM: carboxyl transferase; KEGG: mmc:Mmcs_4432 carboxyl transferase; carboxyl transferase 5338001..5339473 Mycobacterium vanbaalenii PYR-1 4645056 YP_955772.1 CDS Mvan_4994 NC_008726.1 5339487 5341160 R KEGG: mmc:Mmcs_2671 hypothetical protein; hypothetical protein complement(5339487..5341160) Mycobacterium vanbaalenii PYR-1 4645057 YP_955773.1 CDS Mvan_4995 NC_008726.1 5341248 5343257 R PFAM: ABC-2 type transporter; KEGG: mpa:MAP2367c hypothetical protein; ABC-2 type transporter complement(5341248..5343257) Mycobacterium vanbaalenii PYR-1 4645058 YP_955774.1 CDS Mvan_4996 NC_008726.1 5343257 5343958 R KEGG: cjk:jk0688 hypothetical protein; hypothetical protein complement(5343257..5343958) Mycobacterium vanbaalenii PYR-1 4645059 YP_955775.1 CDS Mvan_4997 NC_008726.1 5344202 5344648 R KEGG: mmc:Mmcs_4435 hypothetical protein; hypothetical protein complement(5344202..5344648) Mycobacterium vanbaalenii PYR-1 4645060 YP_955776.1 CDS Mvan_4998 NC_008726.1 5344681 5345784 D PFAM: Epoxide hydrolase domain protein; KEGG: mpa:MAP1989c hypothetical protein; epocide hydrolase domain-containing protein 5344681..5345784 Mycobacterium vanbaalenii PYR-1 4645061 YP_955777.1 CDS Mvan_4999 NC_008726.1 5345798 5346751 R PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO7112 putative ECF-family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(5345798..5346751) Mycobacterium vanbaalenii PYR-1 4645062 YP_955778.1 CDS Mvan_5000 NC_008726.1 5346789 5347538 R KEGG: sco:SCO7104 RNA polymerase sigma factor; RNA polymerase sigma factor complement(5346789..5347538) Mycobacterium vanbaalenii PYR-1 4645063 YP_955779.1 CDS Mvan_5001 NC_008726.1 5347665 5348423 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sco:SCO7108 hypothetical protein; NmrA family protein 5347665..5348423 Mycobacterium vanbaalenii PYR-1 4645064 YP_955780.1 CDS Mvan_5002 NC_008726.1 5348524 5351346 D PFAM: regulatory protein, LuxR; KEGG: mmc:Mmcs_4923 transcriptional regulator, LuxR family; regulatory protein LuxR 5348524..5351346 Mycobacterium vanbaalenii PYR-1 4645065 YP_955781.1 CDS Mvan_5003 NC_008726.1 5351487 5352116 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_4922 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 5351487..5352116 Mycobacterium vanbaalenii PYR-1 4645066 YP_955782.1 CDS Mvan_5004 NC_008726.1 5352121 5355240 R KEGG: mmc:Mmcs_2671 hypothetical protein; hypothetical protein complement(5352121..5355240) Mycobacterium vanbaalenii PYR-1 4645067 YP_955783.1 CDS Mvan_5005 NC_008726.1 5355331 5357151 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4444 ABC transporter related; ABC transporter--like protein complement(5355331..5357151) Mycobacterium vanbaalenii PYR-1 4645068 YP_955784.1 CDS Mvan_5006 NC_008726.1 5357148 5359052 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4445 ABC transporter related; ABC transporter--like protein complement(5357148..5359052) Mycobacterium vanbaalenii PYR-1 4645069 YP_955785.1 CDS Mvan_5007 NC_008726.1 5359045 5361036 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4446 ABC transporter related; ABC transporter--like protein complement(5359045..5361036) Mycobacterium vanbaalenii PYR-1 4645070 YP_955786.1 CDS Mvan_5008 NC_008726.1 5361162 5361917 D PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: mmc:Mmcs_4447 ion transport 2; Ion transport 2 domain-containing protein 5361162..5361917 Mycobacterium vanbaalenii PYR-1 4644618 YP_955787.1 CDS Mvan_5009 NC_008726.1 5361967 5362668 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4448 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5361967..5362668 Mycobacterium vanbaalenii PYR-1 4644619 YP_955788.1 CDS Mvan_5010 NC_008726.1 5362678 5364018 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_4449 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 5362678..5364018 Mycobacterium vanbaalenii PYR-1 4644620 YP_955789.1 CDS Mvan_5011 NC_008726.1 5364110 5364472 R PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mmc:Mmcs_4450 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type complement(5364110..5364472) Mycobacterium vanbaalenii PYR-1 4644621 YP_955790.1 CDS Mvan_5012 NC_008726.1 5364526 5364792 D KEGG: mmc:Mmcs_4451 hypothetical protein; hypothetical protein 5364526..5364792 Mycobacterium vanbaalenii PYR-1 4644622 YP_955791.1 CDS Mvan_5013 NC_008726.1 5364796 5365086 R hypothetical protein complement(5364796..5365086) Mycobacterium vanbaalenii PYR-1 4644623 YP_955792.1 CDS Mvan_5014 NC_008726.1 5365122 5365961 R KEGG: sab:SAB0744 truncated clumping factor; hypothetical protein complement(5365122..5365961) Mycobacterium vanbaalenii PYR-1 4644624 YP_955793.1 CDS Mvan_5015 NC_008726.1 5365969 5366466 R hypothetical protein complement(5365969..5366466) Mycobacterium vanbaalenii PYR-1 4644625 YP_955794.1 CDS Mvan_5016 NC_008726.1 5366468 5367184 R KEGG: mpa:MAP3123c hypothetical protein; hypothetical protein complement(5366468..5367184) Mycobacterium vanbaalenii PYR-1 4644626 YP_955795.1 CDS Mvan_5017 NC_008726.1 5367186 5367869 R KEGG: mmc:Mmcs_3857 hypothetical protein; hypothetical protein complement(5367186..5367869) Mycobacterium vanbaalenii PYR-1 4644627 YP_955796.1 CDS Mvan_5018 NC_008726.1 5368091 5368558 D hypothetical protein 5368091..5368558 Mycobacterium vanbaalenii PYR-1 4644628 YP_955797.1 CDS Mvan_5019 NC_008726.1 5368579 5370129 D KEGG: mmc:Mmcs_4452 hypothetical protein; hypothetical protein 5368579..5370129 Mycobacterium vanbaalenii PYR-1 4644629 YP_955798.1 CDS Mvan_5020 NC_008726.1 5370126 5370545 R PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_4454 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(5370126..5370545) Mycobacterium vanbaalenii PYR-1 4644630 YP_955799.1 CDS Mvan_5021 NC_008726.1 5370535 5371971 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4455 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(5370535..5371971) Mycobacterium vanbaalenii PYR-1 4644631 YP_955800.1 CDS gltA NC_008726.1 5372184 5373488 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(5372184..5373488) Mycobacterium vanbaalenii PYR-1 4644632 YP_955801.1 CDS Mvan_5023 NC_008726.1 5373594 5374202 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4457 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5373594..5374202) Mycobacterium vanbaalenii PYR-1 4644633 YP_955802.1 CDS Mvan_5024 NC_008726.1 5374381 5375049 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(5374381..5375049) Mycobacterium vanbaalenii PYR-1 4644634 YP_955803.1 CDS Mvan_5025 NC_008726.1 5375117 5376232 D forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle; citrate synthase 2 5375117..5376232 Mycobacterium vanbaalenii PYR-1 4644635 YP_955804.1 CDS Mvan_5026 NC_008726.1 5376250 5376846 D KEGG: mmc:Mmcs_4460 hypothetical protein; hypothetical protein 5376250..5376846 Mycobacterium vanbaalenii PYR-1 4644636 YP_955805.1 CDS Mvan_5027 NC_008726.1 5376927 5377388 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4461 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5376927..5377388 Mycobacterium vanbaalenii PYR-1 4644637 YP_955806.1 CDS Mvan_5028 NC_008726.1 5377606 5380437 D hypothetical protein 5377606..5380437 Mycobacterium vanbaalenii PYR-1 4644638 YP_955807.1 CDS Mvan_5029 NC_008726.1 5380444 5382480 D KEGG: csa:Csal_2651 hypothetical protein; hypothetical protein 5380444..5382480 Mycobacterium vanbaalenii PYR-1 4644639 YP_955808.1 CDS Mvan_5030 NC_008726.1 5382544 5385201 R PFAM: glycoside hydrolase, family 1; KEGG: tko:TK1761 beta-glycosidase, GH1 family; glycoside hydrolase family protein complement(5382544..5385201) Mycobacterium vanbaalenii PYR-1 4644640 YP_955809.1 CDS Mvan_5031 NC_008726.1 5385282 5386961 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_4462 4Fe-4S ferredoxin, iron-sulfur binding protein; 4Fe-4S ferredoxin complement(5385282..5386961) Mycobacterium vanbaalenii PYR-1 4644641 YP_955810.1 CDS Mvan_5032 NC_008726.1 5386981 5388018 R KEGG: mmc:Mmcs_4463 hypothetical protein; hypothetical protein complement(5386981..5388018) Mycobacterium vanbaalenii PYR-1 4644642 YP_955811.1 CDS Mvan_5033 NC_008726.1 5388238 5389353 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 5388238..5389353 Mycobacterium vanbaalenii PYR-1 4644643 YP_955812.1 CDS Mvan_5034 NC_008726.1 5389445 5390257 D KEGG: mmc:Mmcs_4465 hypothetical protein; hypothetical protein 5389445..5390257 Mycobacterium vanbaalenii PYR-1 4644771 YP_955813.1 CDS Mvan_5035 NC_008726.1 5390279 5390551 R KEGG: mpa:MAP0821 hypothetical protein; hypothetical protein complement(5390279..5390551) Mycobacterium vanbaalenii PYR-1 4644772 YP_955814.1 CDS Mvan_5036 NC_008726.1 5390548 5391375 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mmc:Mmcs_4467 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(5390548..5391375) Mycobacterium vanbaalenii PYR-1 4644773 YP_955815.1 CDS Mvan_5037 NC_008726.1 5391453 5391704 D KEGG: mmc:Mmcs_4469 hypothetical protein; hypothetical protein 5391453..5391704 Mycobacterium vanbaalenii PYR-1 4644774 YP_955816.1 CDS Mvan_5038 NC_008726.1 5391715 5392167 D PFAM: cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: mmc:Mmcs_4470 hypothetical protein; activator of Hsp90 ATPase 1 family protein 5391715..5392167 Mycobacterium vanbaalenii PYR-1 4644775 YP_955817.1 CDS Mvan_5039 NC_008726.1 5392164 5392991 R KEGG: mmc:Mmcs_4471 hypothetical protein; hypothetical protein complement(5392164..5392991) Mycobacterium vanbaalenii PYR-1 4644776 YP_955818.1 CDS Mvan_5040 NC_008726.1 5393090 5394775 D KEGG: mmc:Mmcs_4472 major facilitator superfamily MFS_1; major facilitator superfamily transporter 5393090..5394775 Mycobacterium vanbaalenii PYR-1 4644777 YP_955819.1 CDS Mvan_5041 NC_008726.1 5394772 5395260 D KEGG: mmc:Mmcs_4473 putative conserved exported protein; hypothetical protein 5394772..5395260 Mycobacterium vanbaalenii PYR-1 4644778 YP_955820.1 CDS Mvan_5042 NC_008726.1 5395300 5398020 D KEGG: mmc:Mmcs_5378 hypothetical protein; hypothetical protein 5395300..5398020 Mycobacterium vanbaalenii PYR-1 4644779 YP_955821.1 CDS Mvan_5043 NC_008726.1 5398058 5399089 R KEGG: mmc:Mmcs_4474 putative glutathione S-transferase; putative glutathione S-transferase complement(5398058..5399089) Mycobacterium vanbaalenii PYR-1 4644780 YP_955822.1 CDS Mvan_5044 NC_008726.1 5399216 5400091 D KEGG: mpa:MAP0813c hypothetical protein; hypothetical protein 5399216..5400091 Mycobacterium vanbaalenii PYR-1 4644781 YP_955823.1 CDS Mvan_5045 NC_008726.1 5400151 5400561 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mmc:Mmcs_4475 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(5400151..5400561) Mycobacterium vanbaalenii PYR-1 4644782 YP_955824.1 CDS Mvan_5046 NC_008726.1 5400743 5401153 D PFAM: protein of unknown function DUF307; KEGG: mmc:Mmcs_4476 protein of unknown function DUF307; hypothetical protein 5400743..5401153 Mycobacterium vanbaalenii PYR-1 4644783 YP_955825.1 CDS moaA NC_008726.1 5401150 5402211 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 5401150..5402211 Mycobacterium vanbaalenii PYR-1 4644784 YP_955826.1 CDS Mvan_5048 NC_008726.1 5402214 5402480 D PFAM: thiamineS protein; KEGG: mbo:Mb0892c putative molybdenum cofactor biosynthesis protein D 2 MoaD2 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor, subunit 1); hypothetical protein 5402214..5402480 Mycobacterium vanbaalenii PYR-1 4644785 YP_955827.1 CDS Mvan_5049 NC_008726.1 5402950 5404284 D PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_4479 transglycosylase-like protein; FHA domain-containing protein 5402950..5404284 Mycobacterium vanbaalenii PYR-1 4644786 YP_955828.1 CDS Mvan_5050 NC_008726.1 5404289 5404714 R PFAM: molybdopterin biosynthesis MoaE; KEGG: mmc:Mmcs_4480 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE complement(5404289..5404714) Mycobacterium vanbaalenii PYR-1 4644787 YP_955829.1 CDS Mvan_5051 NC_008726.1 5404711 5405190 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mmc:Mmcs_4481 molybdopterin binding domain protein; molybdenum cofactor synthesis domain-containing protein complement(5404711..5405190) Mycobacterium vanbaalenii PYR-1 4644788 YP_955830.1 CDS moaC NC_008726.1 5405187 5405669 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(5405187..5405669) Mycobacterium vanbaalenii PYR-1 4644789 YP_955831.1 CDS Mvan_5053 NC_008726.1 5405672 5405857 R KEGG: mpa:MAP0801 hypothetical protein; hypothetical protein complement(5405672..5405857) Mycobacterium vanbaalenii PYR-1 4644790 YP_955832.1 CDS Mvan_5054 NC_008726.1 5405923 5408178 D KEGG: mmc:Mmcs_4484 hypothetical protein; hypothetical protein 5405923..5408178 Mycobacterium vanbaalenii PYR-1 4644791 YP_955833.1 CDS Mvan_5056 NC_008726.1 5411709 5413358 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_4485 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 5411709..5413358 Mycobacterium vanbaalenii PYR-1 4644793 YP_955834.1 CDS Mvan_5057 NC_008726.1 5413374 5423510 R KEGG: bja:bll3563 hypothetical protein; hypothetical protein complement(5413374..5423510) Mycobacterium vanbaalenii PYR-1 4644794 YP_955835.1 CDS Mvan_5058 NC_008726.1 5423648 5426431 R KEGG: syw:SYNW0985 hypothetical protein; hypothetical protein complement(5423648..5426431) Mycobacterium vanbaalenii PYR-1 4644795 YP_955836.1 CDS Mvan_5059 NC_008726.1 5426499 5426816 D PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase; transposase IS3/IS911 family protein 5426499..5426816 Mycobacterium vanbaalenii PYR-1 4644695 YP_955837.1 CDS Mvan_5060 NC_008726.1 5426813 5427706 D PFAM: Integrase, catalytic region; KEGG: bxe:Bxe_B0131 putative transposase; integrase catalytic subunit 5426813..5427706 Mycobacterium vanbaalenii PYR-1 4644696 YP_955838.1 CDS Mvan_5061 NC_008726.1 5427698 5428552 R KEGG: mmc:Mmcs_0779 PKD domain containing protein; hypothetical protein complement(5427698..5428552) Mycobacterium vanbaalenii PYR-1 4644697 YP_955839.1 CDS Mvan_5062 NC_008726.1 5429265 5430257 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_4489 luciferase-like protein; luciferase family protein complement(5429265..5430257) Mycobacterium vanbaalenii PYR-1 4644698 YP_955840.1 CDS Mvan_5063 NC_008726.1 5430325 5430750 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_4490 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 5430325..5430750 Mycobacterium vanbaalenii PYR-1 4644699 YP_955841.1 CDS Mvan_5064 NC_008726.1 5430754 5432262 R PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4491 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5430754..5432262) Mycobacterium vanbaalenii PYR-1 4644700 YP_955842.1 CDS Mvan_5065 NC_008726.1 5432303 5433424 R PFAM: beta-lactamase; KEGG: mtc:MT1414 transesterase; beta-lactamase complement(5432303..5433424) Mycobacterium vanbaalenii PYR-1 4644701 YP_955843.1 CDS Mvan_5066 NC_008726.1 5433513 5435672 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein; 3-hydroxyacyl-CoA dehydrogenase complement(5433513..5435672) Mycobacterium vanbaalenii PYR-1 4644702 YP_955844.1 CDS Mvan_5067 NC_008726.1 5435688 5436899 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(5435688..5436899) Mycobacterium vanbaalenii PYR-1 4644703 YP_955845.1 CDS Mvan_5068 NC_008726.1 5437099 5437287 R KEGG: mpa:MAP0247c hypothetical protein; hypothetical protein complement(5437099..5437287) Mycobacterium vanbaalenii PYR-1 4644704 YP_955846.1 CDS Mvan_5069 NC_008726.1 5437335 5438441 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_4494 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(5437335..5438441) Mycobacterium vanbaalenii PYR-1 4644705 YP_955847.1 CDS Mvan_5070 NC_008726.1 5438578 5439753 D PFAM: aminotransferase, class I and II; KEGG: mmc:Mmcs_4497 aminotransferase, class I and II; aminotransferase 5438578..5439753 Mycobacterium vanbaalenii PYR-1 4644706 YP_955848.1 CDS Mvan_5071 NC_008726.1 5439750 5440196 R PFAM: cyclase/dehydrase; KEGG: mpa:MAP0786 hypothetical protein; cyclase/dehydrase complement(5439750..5440196) Mycobacterium vanbaalenii PYR-1 4644707 YP_955849.1 CDS Mvan_5072 NC_008726.1 5440205 5440645 R PFAM: cyclase/dehydrase; KEGG: mpa:MAP0787 hypothetical protein; cyclase/dehydrase complement(5440205..5440645) Mycobacterium vanbaalenii PYR-1 4644708 YP_955850.1 CDS Mvan_5073 NC_008726.1 5440773 5441243 R PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_4500 cyclase/dehydrase; cyclase/dehydrase complement(5440773..5441243) Mycobacterium vanbaalenii PYR-1 4644709 YP_955851.1 CDS Mvan_5074 NC_008726.1 5441285 5441650 D KEGG: mmc:Mmcs_4502 hypothetical protein; hypothetical protein 5441285..5441650 Mycobacterium vanbaalenii PYR-1 4644710 YP_955852.1 CDS Mvan_5075 NC_008726.1 5441684 5441833 D hypothetical protein 5441684..5441833 Mycobacterium vanbaalenii PYR-1 4644711 YP_955853.1 CDS Mvan_5076 NC_008726.1 5441836 5443398 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_4505 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(5441836..5443398) Mycobacterium vanbaalenii PYR-1 4644712 YP_955854.1 CDS Mvan_5077 NC_008726.1 5443449 5444057 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4506 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5443449..5444057) Mycobacterium vanbaalenii PYR-1 4644713 YP_955855.1 CDS Mvan_5078 NC_008726.1 5444160 5444954 D PFAM: beta-lactamase domain protein; KEGG: mbo:Mb2322c hypothetical protein; beta-lactamase domain-containing protein 5444160..5444954 Mycobacterium vanbaalenii PYR-1 4644714 YP_955856.1 CDS Mvan_5079 NC_008726.1 5445003 5445575 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4507 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5445003..5445575) Mycobacterium vanbaalenii PYR-1 4644715 YP_955857.1 CDS Mvan_5080 NC_008726.1 5445598 5446125 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(5445598..5446125) Mycobacterium vanbaalenii PYR-1 4644716 YP_955858.1 CDS Mvan_5081 NC_008726.1 5446738 5447436 R KEGG: mbo:Mb0328 possible conserved exported protein; hypothetical protein complement(5446738..5447436) Mycobacterium vanbaalenii PYR-1 4644133 YP_955859.1 CDS Mvan_5082 NC_008726.1 5447559 5448455 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_5395 serine/threonine protein kinase; protein kinase complement(5447559..5448455) Mycobacterium vanbaalenii PYR-1 4644134 YP_955860.1 CDS Mvan_5083 NC_008726.1 5448522 5449541 R KEGG: mmc:Mmcs_4509 hypothetical protein; hypothetical protein complement(5448522..5449541) Mycobacterium vanbaalenii PYR-1 4644135 YP_955861.1 CDS Mvan_5084 NC_008726.1 5449621 5450202 D KEGG: mmc:Mmcs_4510 transcriptional regulator, TetR family; TetR family transcriptional regulator 5449621..5450202 Mycobacterium vanbaalenii PYR-1 4644136 YP_955862.1 CDS Mvan_5085 NC_008726.1 5450308 5451315 D PFAM: fatty acid desaturase, type 2; KEGG: mmc:Mmcs_4511 fatty acid desaturase, type 2; fatty acid desaturase, type 2 5450308..5451315 Mycobacterium vanbaalenii PYR-1 4644137 YP_955863.1 CDS Mvan_5086 NC_008726.1 5451345 5452478 D TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: mmc:Mmcs_4512 dihydrouridine synthase TIM-barrel protein nifR3; nifR3 family TIM-barrel protein 5451345..5452478 Mycobacterium vanbaalenii PYR-1 4644138 YP_955864.1 CDS Mvan_5087 NC_008726.1 5452715 5454778 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mmc:Mmcs_4513 cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 5452715..5454778 Mycobacterium vanbaalenii PYR-1 4644139 YP_955865.1 CDS Mvan_5088 NC_008726.1 5454866 5455534 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mpa:MAP0655c phosphate transport system regulator; phosphate uptake regulator PhoU 5454866..5455534 Mycobacterium vanbaalenii PYR-1 4644140 YP_955866.1 CDS Mvan_5089 NC_008726.1 5455611 5456381 R KEGG: mmc:Mmcs_4516 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(5455611..5456381) Mycobacterium vanbaalenii PYR-1 4644141 YP_955867.1 CDS Mvan_5090 NC_008726.1 5456389 5457291 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4517 phosphate transport system permease protein 2; phosphate ABC transporter permease complement(5456389..5457291) Mycobacterium vanbaalenii PYR-1 4644142 YP_955868.1 CDS Mvan_5091 NC_008726.1 5457288 5458256 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4518 phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease complement(5457288..5458256) Mycobacterium vanbaalenii PYR-1 4644143 YP_955869.1 CDS Mvan_5092 NC_008726.1 5458350 5459483 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_4519 periplasmic phosphate binding protein; phosphate ABC transporter periplasmic phosphate-binding protein complement(5458350..5459483) Mycobacterium vanbaalenii PYR-1 4644144 YP_955870.1 CDS Mvan_5093 NC_008726.1 5459686 5460363 D PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; KEGG: mmc:Mmcs_4520 transcriptional regulator, ArsR family; protein tyrosine phosphatase 5459686..5460363 Mycobacterium vanbaalenii PYR-1 4644145 YP_955871.1 CDS Mvan_5094 NC_008726.1 5460377 5461054 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_4521 protein tyrosine phosphatase; protein tyrosine phosphatase 5460377..5461054 Mycobacterium vanbaalenii PYR-1 4644146 YP_955872.1 CDS Mvan_5095 NC_008726.1 5461251 5463440 D KEGG: dar:Daro_2637 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; Arsenical resistance operon trans-acting repressor ArsD; SMART: AAA ATPase; arsenite-activated ATPase ArsA 5461251..5463440 Mycobacterium vanbaalenii PYR-1 4644147 YP_955873.1 CDS Mvan_5096 NC_008726.1 5463461 5464366 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_4524 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5463461..5464366) Mycobacterium vanbaalenii PYR-1 4644148 YP_955874.1 CDS Mvan_5097 NC_008726.1 5464363 5465166 R PFAM: transcriptional regulator domain protein; KEGG: mmc:Mmcs_4525 response regulator receiver protein; response regulator receiver protein complement(5464363..5465166) Mycobacterium vanbaalenii PYR-1 4644149 YP_955875.1 CDS Mvan_5098 NC_008726.1 5465352 5466149 D KEGG: mmc:Mmcs_4526 hypothetical protein; hypothetical protein 5465352..5466149 Mycobacterium vanbaalenii PYR-1 4644150 YP_955876.1 CDS Mvan_5099 NC_008726.1 5466146 5466577 D PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_4527 thioredoxin domain protein; thioredoxin domain-containing protein 5466146..5466577 Mycobacterium vanbaalenii PYR-1 4644151 YP_955877.1 CDS Mvan_5100 NC_008726.1 5466792 5467253 D KEGG: mmc:Mmcs_4528 hypothetical protein; hypothetical protein 5466792..5467253 Mycobacterium vanbaalenii PYR-1 4644152 YP_955878.1 CDS Mvan_5101 NC_008726.1 5467273 5468106 D PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_4529 thiosulfate sulfurtransferase; thiosulfate sulfurtransferase 5467273..5468106 Mycobacterium vanbaalenii PYR-1 4644153 YP_955879.1 CDS Mvan_5102 NC_008726.1 5468108 5468410 D PFAM: protein of unknown function DUF1416; KEGG: mmc:Mmcs_4530 protein of unknown function DUF1416; hypothetical protein 5468108..5468410 Mycobacterium vanbaalenii PYR-1 4644154 YP_955880.1 CDS Mvan_5103 NC_008726.1 5468677 5468997 D PFAM: protein of unknown function DUF732; KEGG: mmc:Mmcs_4531 protein of unknown function DUF732; hypothetical protein 5468677..5468997 Mycobacterium vanbaalenii PYR-1 4647540 YP_955881.1 CDS Mvan_5104 NC_008726.1 5469057 5469155 D KEGG: mmc:Mmcs_4532 hypothetical protein; hypothetical protein 5469057..5469155 Mycobacterium vanbaalenii PYR-1 4647541 YP_955882.1 CDS Mvan_5105 NC_008726.1 5469152 5469781 D KEGG: mmc:Mmcs_4533 hypothetical protein; hypothetical protein 5469152..5469781 Mycobacterium vanbaalenii PYR-1 4647542 YP_955883.1 CDS Mvan_5106 NC_008726.1 5469781 5470044 D KEGG: mmc:Mmcs_4534 hypothetical protein; hypothetical protein 5469781..5470044 Mycobacterium vanbaalenii PYR-1 4647543 YP_955884.1 CDS Mvan_5107 NC_008726.1 5470041 5470901 R PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: sma:SAV6283 putative amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein complement(5470041..5470901) Mycobacterium vanbaalenii PYR-1 4647544 YP_955885.1 CDS Mvan_5108 NC_008726.1 5471174 5472055 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(5471174..5472055) Mycobacterium vanbaalenii PYR-1 4647545 YP_955886.1 CDS Mvan_5109 NC_008726.1 5472107 5473192 D KEGG: mmc:Mmcs_4536 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 5472107..5473192 Mycobacterium vanbaalenii PYR-1 4647546 YP_955887.1 CDS Mvan_5110 NC_008726.1 5473328 5473513 D KEGG: mbo:Mb0833c hypothetical protein; hypothetical protein 5473328..5473513 Mycobacterium vanbaalenii PYR-1 4647547 YP_955888.1 CDS Mvan_5111 NC_008726.1 5473538 5474692 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(5473538..5474692) Mycobacterium vanbaalenii PYR-1 4647548 YP_955889.1 CDS Mvan_5112 NC_008726.1 5474755 5475231 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_4539 cupin 2, conserved barrel; cupin 2 domain-containing protein 5474755..5475231 Mycobacterium vanbaalenii PYR-1 4647549 YP_955890.1 CDS Mvan_5113 NC_008726.1 5475310 5476293 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4540 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5475310..5476293 Mycobacterium vanbaalenii PYR-1 4647550 YP_955891.1 CDS Mvan_5114 NC_008726.1 5476349 5477881 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(5476349..5477881) Mycobacterium vanbaalenii PYR-1 4647551 YP_955892.1 CDS Mvan_5115 NC_008726.1 5478005 5478454 R KEGG: mmc:Mmcs_4542 hypothetical protein; hypothetical protein complement(5478005..5478454) Mycobacterium vanbaalenii PYR-1 4647552 YP_955893.1 CDS Mvan_5116 NC_008726.1 5478492 5479004 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sco:SCO5077 protein involved in polyketide synthesis; pyridoxamine 5'-phosphate oxidase-like protein 5478492..5479004 Mycobacterium vanbaalenii PYR-1 4647553 YP_955894.1 CDS Mvan_5117 NC_008726.1 5478898 5479569 R PFAM: Abortive infection protein; KEGG: mmc:Mmcs_4544 abortive infection protein; abortive infection protein complement(5478898..5479569) Mycobacterium vanbaalenii PYR-1 4647554 YP_955895.1 CDS Mvan_5118 NC_008726.1 5479569 5481290 R KEGG: mmc:Mmcs_4545 hypothetical protein; hypothetical protein complement(5479569..5481290) Mycobacterium vanbaalenii PYR-1 4647555 YP_955896.1 CDS Mvan_5119 NC_008726.1 5481287 5483581 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II complement(5481287..5483581) Mycobacterium vanbaalenii PYR-1 4647556 YP_955897.1 CDS Mvan_5120 NC_008726.1 5483625 5483966 R KEGG: mmc:Mmcs_4549 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(5483625..5483966) Mycobacterium vanbaalenii PYR-1 4647557 YP_955898.1 CDS Mvan_5121 NC_008726.1 5483981 5485243 R catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase 2 complement(5483981..5485243) Mycobacterium vanbaalenii PYR-1 4647558 YP_955899.1 CDS Mvan_5122 NC_008726.1 5485294 5486319 D TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mbo:Mb0822c putative iron-dependent peroxidase; Dyp-type peroxidase family protein 5485294..5486319 Mycobacterium vanbaalenii PYR-1 4647559 YP_955900.1 CDS Mvan_5123 NC_008726.1 5486316 5487113 D PFAM: Linocin_M18 bacteriocin protein; KEGG: mbo:Mb0821c 29 KDa antigen CFP29; Linocin_M18 bacteriocin protein 5486316..5487113 Mycobacterium vanbaalenii PYR-1 4647560 YP_955901.1 CDS Mvan_5124 NC_008726.1 5487491 5488813 R hypothetical protein complement(5487491..5488813) Mycobacterium vanbaalenii PYR-1 4647561 YP_955902.1 CDS Mvan_5125 NC_008726.1 5488810 5489541 R hypothetical protein complement(5488810..5489541) Mycobacterium vanbaalenii PYR-1 4647562 YP_955903.1 CDS Mvan_5126 NC_008726.1 5489538 5490872 R hypothetical protein complement(5489538..5490872) Mycobacterium vanbaalenii PYR-1 4647563 YP_955904.1 CDS Mvan_5127 NC_008726.1 5490876 5491160 R KEGG: mmc:Mmcs_0802 hypothetical protein; hypothetical protein complement(5490876..5491160) Mycobacterium vanbaalenii PYR-1 4647564 YP_955905.1 CDS Mvan_5128 NC_008726.1 5491216 5491890 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(5491216..5491890) Mycobacterium vanbaalenii PYR-1 4647488 YP_955906.1 CDS Mvan_5129 NC_008726.1 5491887 5492129 R With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS complement(5491887..5492129) Mycobacterium vanbaalenii PYR-1 4647489 YP_955907.1 CDS Mvan_5130 NC_008726.1 5492165 5492836 R KEGG: mmc:Mmcs_4554 hypothetical protein; hypothetical protein complement(5492165..5492836) Mycobacterium vanbaalenii PYR-1 4647490 YP_955908.1 CDS Mvan_5131 NC_008726.1 5492876 5493532 D PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_4555 beta-lactamase-like protein; beta-lactamase domain-containing protein 5492876..5493532 Mycobacterium vanbaalenii PYR-1 4647491 YP_955909.1 CDS Mvan_5132 NC_008726.1 5493609 5495276 R proposed role in polysaccahride synthesis; putative FAD-binding dehydrogenase complement(5493609..5495276) Mycobacterium vanbaalenii PYR-1 4647492 YP_955910.1 CDS Mvan_5133 NC_008726.1 5495303 5496013 R KEGG: mmc:Mmcs_4556 hypothetical protein; hypothetical protein complement(5495303..5496013) Mycobacterium vanbaalenii PYR-1 4647493 YP_955911.1 CDS Mvan_5134 NC_008726.1 5496075 5496572 R PFAM: glutathione peroxidase; KEGG: mmc:Mmcs_4557 glutathione peroxidase; glutathione peroxidase complement(5496075..5496572) Mycobacterium vanbaalenii PYR-1 4647494 YP_955912.1 CDS Mvan_5135 NC_008726.1 5496569 5497147 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4558 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5496569..5497147) Mycobacterium vanbaalenii PYR-1 4647495 YP_955913.1 CDS Mvan_5136 NC_008726.1 5497232 5497690 D KEGG: mpa:MAP0616c hypothetical protein; hypothetical protein 5497232..5497690 Mycobacterium vanbaalenii PYR-1 4647496 YP_955914.1 CDS Mvan_5137 NC_008726.1 5497649 5499787 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: mmc:Mmcs_4559 oligopeptidase B; oligopeptidase B complement(5497649..5499787) Mycobacterium vanbaalenii PYR-1 4647497 YP_955915.1 CDS Mvan_5138 NC_008726.1 5499784 5500689 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(5499784..5500689) Mycobacterium vanbaalenii PYR-1 4647498 YP_955916.1 CDS Mvan_5139 NC_008726.1 5500742 5501374 D KEGG: mmc:Mmcs_4561 putative conserved transmembrane protein; putative transmembrane protein 5500742..5501374 Mycobacterium vanbaalenii PYR-1 4647499 YP_955917.1 CDS Mvan_5140 NC_008726.1 5501500 5502075 R PFAM: protein of unknown function DUF1707; KEGG: nfa:nfa54900 hypothetical protein; hypothetical protein complement(5501500..5502075) Mycobacterium vanbaalenii PYR-1 4647500 YP_955918.1 CDS Mvan_5141 NC_008726.1 5502146 5504062 R PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_4562 glycosyl transferase, family 2; glycosyl transferase family protein complement(5502146..5504062) Mycobacterium vanbaalenii PYR-1 4647501 YP_955919.1 CDS Mvan_5142 NC_008726.1 5504059 5505930 R KEGG: mmc:Mmcs_4563 hypothetical protein; hypothetical protein complement(5504059..5505930) Mycobacterium vanbaalenii PYR-1 4647502 YP_955920.1 CDS Mvan_5143 NC_008726.1 5505927 5507123 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: mmc:Mmcs_4564 UDP-sulfoquinovose synthase; NAD-dependent epimerase/dehydratase complement(5505927..5507123) Mycobacterium vanbaalenii PYR-1 4647503 YP_955921.1 CDS Mvan_5144 NC_008726.1 5507203 5508432 R PFAM: cytochrome P450; KEGG: mpa:MAP0612 putative cytochrome p-450; cytochrome P450 complement(5507203..5508432) Mycobacterium vanbaalenii PYR-1 4647504 YP_955922.1 CDS Mvan_5145 NC_008726.1 5508429 5509904 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(5508429..5509904) Mycobacterium vanbaalenii PYR-1 4647505 YP_955923.1 CDS Mvan_5146 NC_008726.1 5509915 5511639 D PFAM: RelA/SpoT domain protein; KEGG: mbo:Mb0799c hypothetical protein; RelA/SpoT domain-containing protein 5509915..5511639 Mycobacterium vanbaalenii PYR-1 4647506 YP_955924.1 CDS Mvan_5147 NC_008726.1 5511636 5513072 R PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_4568 amino acid permease-associated region; amino acid permease-associated protein complement(5511636..5513072) Mycobacterium vanbaalenii PYR-1 4647507 YP_955925.1 CDS Mvan_5148 NC_008726.1 5513256 5513855 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4569 putative transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5513256..5513855) Mycobacterium vanbaalenii PYR-1 4647508 YP_955926.1 CDS Mvan_5149 NC_008726.1 5513960 5514787 D KEGG: mmc:Mmcs_4570 putative esterase; putative esterase 5513960..5514787 Mycobacterium vanbaalenii PYR-1 4647509 YP_955927.1 CDS Mvan_5150 NC_008726.1 5514784 5516076 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(5514784..5516076) Mycobacterium vanbaalenii PYR-1 4647510 YP_955928.1 CDS Mvan_5151 NC_008726.1 5516172 5517404 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_4572 cytochrome P450; cytochrome P450 5516172..5517404 Mycobacterium vanbaalenii PYR-1 4647511 YP_955929.1 CDS Mvan_5152 NC_008726.1 5517544 5518164 D PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: mmc:Mmcs_4573 transcriptional regulator, TetR family; TetR family transcriptional regulator 5517544..5518164 Mycobacterium vanbaalenii PYR-1 4647512 YP_955930.1 CDS Mvan_5153 NC_008726.1 5518195 5519430 R KEGG: mmc:Mmcs_4574 hypothetical protein; hypothetical protein complement(5518195..5519430) Mycobacterium vanbaalenii PYR-1 4647513 YP_955931.1 CDS Mvan_5154 NC_008726.1 5519411 5519869 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0605 hypothetical protein; carboxymuconolactone decarboxylase complement(5519411..5519869) Mycobacterium vanbaalenii PYR-1 4647438 YP_955932.1 CDS Mvan_5155 NC_008726.1 5519875 5520747 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4576 6-phosphogluconate dehydrogenase, NAD-binding protein; 6-phosphogluconate dehydrogenase complement(5519875..5520747) Mycobacterium vanbaalenii PYR-1 4647439 YP_955933.1 CDS Mvan_5156 NC_008726.1 5520744 5521508 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4577 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5520744..5521508) Mycobacterium vanbaalenii PYR-1 4647440 YP_955934.1 CDS Mvan_5157 NC_008726.1 5521520 5522989 R PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4578 aldehyde dehydrogenase; aldehyde dehydrogenase complement(5521520..5522989) Mycobacterium vanbaalenii PYR-1 4647441 YP_955935.1 CDS Mvan_5158 NC_008726.1 5523165 5523761 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4579 transcriptional regulator, TetR family; TetR family transcriptional regulator 5523165..5523761 Mycobacterium vanbaalenii PYR-1 4647442 YP_955936.1 CDS Mvan_5159 NC_008726.1 5523784 5524992 D PFAM: cytochrome P450; KEGG: mpa:MAP0600c putative cytochrome P450; cytochrome P450 5523784..5524992 Mycobacterium vanbaalenii PYR-1 4647443 YP_955937.1 CDS Mvan_5160 NC_008726.1 5524992 5525816 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4581 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 5524992..5525816 Mycobacterium vanbaalenii PYR-1 4647444 YP_955938.1 CDS Mvan_5161 NC_008726.1 5525813 5527171 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_4582 cytochrome P450; cytochrome P450 5525813..5527171 Mycobacterium vanbaalenii PYR-1 4647445 YP_955939.1 CDS Mvan_5162 NC_008726.1 5527176 5527391 D KEGG: mmc:Mmcs_4583 hypothetical protein; hypothetical protein 5527176..5527391 Mycobacterium vanbaalenii PYR-1 4647446 YP_955940.1 CDS Mvan_5163 NC_008726.1 5527394 5527933 D KEGG: mmc:Mmcs_4584 hypothetical protein; hypothetical protein 5527394..5527933 Mycobacterium vanbaalenii PYR-1 4647447 YP_955941.1 CDS Mvan_5164 NC_008726.1 5528027 5529157 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_4585 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 5528027..5529157 Mycobacterium vanbaalenii PYR-1 4647448 YP_955942.1 CDS Mvan_5165 NC_008726.1 5529246 5529677 D PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_4586 nuclear transport factor 2; nuclear transport factor 2 5529246..5529677 Mycobacterium vanbaalenii PYR-1 4647449 YP_955943.1 CDS Mvan_5166 NC_008726.1 5529703 5530527 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4587 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5529703..5530527 Mycobacterium vanbaalenii PYR-1 4647450 YP_955944.1 CDS Mvan_5167 NC_008726.1 5530528 5531448 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_0329 luciferase-like protein; luciferase family protein complement(5530528..5531448) Mycobacterium vanbaalenii PYR-1 4647451 YP_955945.1 CDS Mvan_5168 NC_008726.1 5531455 5532294 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0330 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5531455..5532294) Mycobacterium vanbaalenii PYR-1 4647452 YP_955946.1 CDS Mvan_5169 NC_008726.1 5532370 5532960 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0331 putative transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5532370..5532960) Mycobacterium vanbaalenii PYR-1 4647453 YP_955947.1 CDS Mvan_5170 NC_008726.1 5533075 5534355 D PFAM: cytochrome P450; KEGG: mmc:Mmcs_0332 cytochrome P450; cytochrome P450 5533075..5534355 Mycobacterium vanbaalenii PYR-1 4647454 YP_955948.1 CDS Mvan_5171 NC_008726.1 5534352 5535116 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6740 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5534352..5535116 Mycobacterium vanbaalenii PYR-1 4647455 YP_955949.1 CDS Mvan_5172 NC_008726.1 5535102 5536751 R PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_1006 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5535102..5536751) Mycobacterium vanbaalenii PYR-1 4647456 YP_955950.1 CDS Mvan_5173 NC_008726.1 5536828 5537244 D PFAM: histidine triad (HIT) protein; KEGG: mpa:MAP0593c hypothetical protein; histidine triad (HIT) protein 5536828..5537244 Mycobacterium vanbaalenii PYR-1 4647457 YP_955951.1 CDS Mvan_5174 NC_008726.1 5537227 5538738 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mmc:Mmcs_4589 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(5537227..5538738) Mycobacterium vanbaalenii PYR-1 4647458 YP_955952.1 CDS Mvan_5175 NC_008726.1 5538821 5539531 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4590 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(5538821..5539531) Mycobacterium vanbaalenii PYR-1 4647459 YP_955953.1 CDS Mvan_5176 NC_008726.1 5539634 5540368 D KEGG: mmc:Mmcs_4591 hypothetical protein; hypothetical protein 5539634..5540368 Mycobacterium vanbaalenii PYR-1 4647460 YP_955954.1 CDS Mvan_5177 NC_008726.1 5540375 5540782 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_4592 hypothetical protein; HNH endonuclease complement(5540375..5540782) Mycobacterium vanbaalenii PYR-1 4647461 YP_955955.1 CDS Mvan_5178 NC_008726.1 5541150 5543408 D TIGRFAM: trehalose synthase; PFAM: alpha amylase, catalytic region; KEGG: mmc:Mmcs_0346 trehalose synthase; trehalose synthase 5541150..5543408 Mycobacterium vanbaalenii PYR-1 4645695 YP_955956.1 CDS Mvan_5179 NC_008726.1 5543418 5543774 D hypothetical protein 5543418..5543774 Mycobacterium vanbaalenii PYR-1 4645696 YP_955957.1 CDS Mvan_5180 NC_008726.1 5543953 5546031 D KEGG: mmc:Mmcs_0411 hypothetical protein; hypothetical protein 5543953..5546031 Mycobacterium vanbaalenii PYR-1 4645697 YP_955958.1 CDS Mvan_5181 NC_008726.1 5546051 5546716 R PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: mtc:MT0860 D-alanyl-D-alanine dipeptidase; peptidase M15D, vanX D-ala-D-ala dipeptidase complement(5546051..5546716) Mycobacterium vanbaalenii PYR-1 4645698 YP_955959.1 CDS Mvan_5182 NC_008726.1 5546745 5547866 D PFAM: protein of unknown function DUF182; KEGG: mmc:Mmcs_0488 protein of unknown function DUF182; hypothetical protein 5546745..5547866 Mycobacterium vanbaalenii PYR-1 4645699 YP_955960.1 CDS Mvan_5183 NC_008726.1 5547962 5550334 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mmc:Mmcs_4600 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 5547962..5550334 Mycobacterium vanbaalenii PYR-1 4645700 YP_955961.1 CDS Mvan_5184 NC_008726.1 5550337 5551035 D PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mmc:Mmcs_4601 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 5550337..5551035 Mycobacterium vanbaalenii PYR-1 4645701 YP_955962.1 CDS Mvan_5185 NC_008726.1 5551032 5551925 D PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_4602 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 5551032..5551925 Mycobacterium vanbaalenii PYR-1 4645702 YP_955963.1 CDS Mvan_5186 NC_008726.1 5551918 5552391 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_4603 (2Fe-2S)-binding protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 5551918..5552391 Mycobacterium vanbaalenii PYR-1 4645703 YP_955964.1 CDS Mvan_5187 NC_008726.1 5552475 5553368 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mmc:Mmcs_4604 6-phosphogluconate dehydrogenase, NAD-binding protein; 6-phosphogluconate dehydrogenase 5552475..5553368 Mycobacterium vanbaalenii PYR-1 4645704 YP_955965.1 CDS Mvan_5188 NC_008726.1 5553490 5555250 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein 5553490..5555250 Mycobacterium vanbaalenii PYR-1 4645705 YP_955966.1 CDS Mvan_5189 NC_008726.1 5555262 5556104 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4606 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5555262..5556104) Mycobacterium vanbaalenii PYR-1 4645706 YP_955967.1 CDS Mvan_5190 NC_008726.1 5556159 5557064 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(5556159..5557064) Mycobacterium vanbaalenii PYR-1 4645707 YP_955968.1 CDS Mvan_5191 NC_008726.1 5557123 5557287 D KEGG: mmc:Mmcs_4608 hypothetical protein; hypothetical protein 5557123..5557287 Mycobacterium vanbaalenii PYR-1 4645708 YP_955969.1 CDS Mvan_5192 NC_008726.1 5557287 5558762 D PFAM: glycosyl transferase, family 20; KEGG: mmc:Mmcs_4609 alpha,alpha-trehalose-phosphate synthase (UDP-forming); alpha,alpha-trehalose-phosphate synthase 5557287..5558762 Mycobacterium vanbaalenii PYR-1 4645709 YP_955970.1 CDS Mvan_5193 NC_008726.1 5558833 5559678 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mmc:Mmcs_0326 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5558833..5559678 Mycobacterium vanbaalenii PYR-1 4645710 YP_955971.1 CDS Mvan_5194 NC_008726.1 5559683 5560633 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_5247 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(5559683..5560633) Mycobacterium vanbaalenii PYR-1 4645711 YP_955972.1 CDS Mvan_5195 NC_008726.1 5560698 5561192 R KEGG: mmc:Mmcs_4610 hypothetical protein; hypothetical protein complement(5560698..5561192) Mycobacterium vanbaalenii PYR-1 4645712 YP_955973.1 CDS Mvan_5196 NC_008726.1 5561192 5561869 R KEGG: mmc:Mmcs_4611 hypothetical protein; hypothetical protein complement(5561192..5561869) Mycobacterium vanbaalenii PYR-1 4645713 YP_955974.1 CDS Mvan_5197 NC_008726.1 5561873 5563567 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4612 mammalian cell entry; virulence factor Mce family protein complement(5561873..5563567) Mycobacterium vanbaalenii PYR-1 4645714 YP_955975.1 CDS Mvan_5198 NC_008726.1 5563567 5564727 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4613 mammalian cell entry; virulence factor Mce family protein complement(5563567..5564727) Mycobacterium vanbaalenii PYR-1 4645715 YP_955976.1 CDS Mvan_5199 NC_008726.1 5564724 5566085 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4614 mammalian cell entry; virulence factor Mce family protein complement(5564724..5566085) Mycobacterium vanbaalenii PYR-1 4645716 YP_955977.1 CDS Mvan_5200 NC_008726.1 5566100 5567167 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4615 mammalian cell entry; virulence factor Mce family protein complement(5566100..5567167) Mycobacterium vanbaalenii PYR-1 4645717 YP_955978.1 CDS Mvan_5201 NC_008726.1 5567151 5568176 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4616 mammalian cell entry; virulence factor Mce family protein complement(5567151..5568176) Mycobacterium vanbaalenii PYR-1 4645718 YP_955979.1 CDS Mvan_5202 NC_008726.1 5568176 5569378 R TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4617 mammalian cell entry; virulence factor Mce family protein complement(5568176..5569378) Mycobacterium vanbaalenii PYR-1 4645719 YP_955980.1 CDS Mvan_5203 NC_008726.1 5569391 5570233 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_4618 protein of unknown function DUF140; hypothetical protein complement(5569391..5570233) Mycobacterium vanbaalenii PYR-1 4644304 YP_955981.1 CDS Mvan_5204 NC_008726.1 5570230 5570943 R PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_4619 protein of unknown function DUF140; hypothetical protein complement(5570230..5570943) Mycobacterium vanbaalenii PYR-1 4644305 YP_955982.1 CDS fabG NC_008726.1 5571265 5572188 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(5571265..5572188) Mycobacterium vanbaalenii PYR-1 4644306 YP_955983.1 CDS Mvan_5206 NC_008726.1 5572529 5573710 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4622 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5572529..5573710 Mycobacterium vanbaalenii PYR-1 4644307 YP_955984.1 CDS Mvan_5207 NC_008726.1 5573719 5574828 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4623 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5573719..5574828 Mycobacterium vanbaalenii PYR-1 4644308 YP_955985.1 CDS Mvan_5208 NC_008726.1 5574842 5576353 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5574842..5576353 Mycobacterium vanbaalenii PYR-1 4644309 YP_955986.1 CDS Mvan_5209 NC_008726.1 5576350 5578014 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5576350..5578014 Mycobacterium vanbaalenii PYR-1 4644310 YP_955987.1 CDS Mvan_5210 NC_008726.1 5578001 5579554 D catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 5578001..5579554 Mycobacterium vanbaalenii PYR-1 4644311 YP_955988.1 CDS Mvan_5211 NC_008726.1 5579551 5580681 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4640 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 5579551..5580681 Mycobacterium vanbaalenii PYR-1 4644312 YP_955989.1 CDS Mvan_5212 NC_008726.1 5580766 5581503 D KEGG: mmc:Mmcs_4282 LpqN; LpqN 5580766..5581503 Mycobacterium vanbaalenii PYR-1 4644313 YP_955990.1 CDS Mvan_5213 NC_008726.1 5581560 5583119 R thiamine-pyrophosphate requiring enzyme; hypothetical protein complement(5581560..5583119) Mycobacterium vanbaalenii PYR-1 4644314 YP_955991.1 CDS Mvan_5214 NC_008726.1 5583157 5584278 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4626 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(5583157..5584278) Mycobacterium vanbaalenii PYR-1 4644315 YP_955992.1 CDS Mvan_5215 NC_008726.1 5584279 5585928 R activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase complement(5584279..5585928) Mycobacterium vanbaalenii PYR-1 4644316 YP_955993.1 CDS Mvan_5216 NC_008726.1 5585997 5586797 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5585997..5586797 Mycobacterium vanbaalenii PYR-1 4644317 YP_955994.1 CDS Mvan_5217 NC_008726.1 5586867 5588075 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_4631 cytochrome P450; cytochrome P450 complement(5586867..5588075) Mycobacterium vanbaalenii PYR-1 4644318 YP_955995.1 CDS Mvan_5218 NC_008726.1 5588072 5588812 R KEGG: mpa:MAP0546c hypothetical protein; hypothetical protein complement(5588072..5588812) Mycobacterium vanbaalenii PYR-1 4644319 YP_955996.1 CDS Mvan_5219 NC_008726.1 5588869 5589900 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_4633 luciferase-like protein; luciferase family protein complement(5588869..5589900) Mycobacterium vanbaalenii PYR-1 4644320 YP_955997.1 CDS Mvan_5220 NC_008726.1 5589997 5590989 D PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4634 protein of unknown function DUF35; hypothetical protein 5589997..5590989 Mycobacterium vanbaalenii PYR-1 4644321 YP_955998.1 CDS Mvan_5221 NC_008726.1 5591002 5592060 D KEGG: mmc:Mmcs_4635 lipid-transfer protein; lipid-transfer protein 5591002..5592060 Mycobacterium vanbaalenii PYR-1 4644322 YP_955999.1 CDS Mvan_5222 NC_008726.1 5592060 5593235 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5592060..5593235 Mycobacterium vanbaalenii PYR-1 4644323 YP_956000.1 CDS Mvan_5223 NC_008726.1 5593247 5593840 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5207 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5593247..5593840) Mycobacterium vanbaalenii PYR-1 4644324 YP_956001.1 CDS Mvan_5224 NC_008726.1 5593845 5595071 R PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa48440 putative transporter; major facilitator superfamily transporter complement(5593845..5595071) Mycobacterium vanbaalenii PYR-1 4644325 YP_956002.1 CDS Mvan_5225 NC_008726.1 5595250 5596404 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4640 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 5595250..5596404 Mycobacterium vanbaalenii PYR-1 4644326 YP_956003.1 CDS Mvan_5226 NC_008726.1 5596436 5596894 D KEGG: mmc:Mmcs_4641 hypothetical protein; hypothetical protein 5596436..5596894 Mycobacterium vanbaalenii PYR-1 4644327 YP_956004.1 CDS Mvan_5227 NC_008726.1 5596964 5598109 R KEGG: mmc:Mmcs_4645 hypothetical protein; hypothetical protein complement(5596964..5598109) Mycobacterium vanbaalenii PYR-1 4644328 YP_956005.1 CDS Mvan_5228 NC_008726.1 5598106 5598891 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4646 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5598106..5598891) Mycobacterium vanbaalenii PYR-1 4644329 YP_956006.1 CDS Mvan_5229 NC_008726.1 5598893 5600056 R KEGG: mmc:Mmcs_4647 hypothetical protein; hypothetical protein complement(5598893..5600056) Mycobacterium vanbaalenii PYR-1 4645244 YP_956007.1 CDS Mvan_5230 NC_008726.1 5600105 5601055 D SMART: regulatory proteins, IclR; KEGG: mmc:Mmcs_4648 transcriptional regulator, IclR family; regulatory proteins IclR 5600105..5601055 Mycobacterium vanbaalenii PYR-1 4645245 YP_956008.1 CDS Mvan_5231 NC_008726.1 5601052 5602026 R KEGG: mxa:MXAN_2257 FHA domain protein; hypothetical protein complement(5601052..5602026) Mycobacterium vanbaalenii PYR-1 4645246 YP_956009.1 CDS Mvan_5232 NC_008726.1 5602217 5602609 R KEGG: mmc:Mmcs_5179 hypothetical protein; hypothetical protein complement(5602217..5602609) Mycobacterium vanbaalenii PYR-1 4645247 YP_956010.1 CDS Mvan_5233 NC_008726.1 5602781 5604895 R KEGG: mmc:Mmcs_4657 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ complement(5602781..5604895) Mycobacterium vanbaalenii PYR-1 4645248 YP_956011.1 CDS Mvan_5234 NC_008726.1 5604926 5605978 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(5604926..5605978) Mycobacterium vanbaalenii PYR-1 4645249 YP_956012.1 CDS Mvan_5235 NC_008726.1 5605975 5606895 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(5605975..5606895) Mycobacterium vanbaalenii PYR-1 4645250 YP_956013.1 CDS Mvan_5236 NC_008726.1 5606905 5607690 R PFAM: Hydratase/decarboxylase; KEGG: mmc:Mmcs_4661 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase complement(5606905..5607690) Mycobacterium vanbaalenii PYR-1 4645251 YP_956014.2 CDS Mvan_5237 NC_008726.1 5607763 5609445 D initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 5607763..5609445 Mycobacterium vanbaalenii PYR-1 4645252 YP_956015.1 CDS Mvan_5238 NC_008726.1 5609451 5610311 D PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4663 MaoC-like dehydratase; dehydratase 5609451..5610311 Mycobacterium vanbaalenii PYR-1 4645253 YP_956016.1 CDS Mvan_5239 NC_008726.1 5610318 5610833 R KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein; putative alanine and proline rich membrane protein complement(5610318..5610833) Mycobacterium vanbaalenii PYR-1 4645254 YP_956017.1 CDS Mvan_5240 NC_008726.1 5610912 5612363 R KEGG: mbo:Mb3402 PE-PGRS family protein; PE-PGRS family protein complement(5610912..5612363) Mycobacterium vanbaalenii PYR-1 4645255 YP_956018.1 CDS Mvan_5241 NC_008726.1 5612945 5613835 D KEGG: mmc:Mmcs_0060 FHA domain containing protein; FHA domain-containing protein 5612945..5613835 Mycobacterium vanbaalenii PYR-1 4645256 YP_956019.1 CDS Mvan_5242 NC_008726.1 5613890 5614603 R KEGG: mmc:Mmcs_0059 hypothetical protein; hypothetical protein complement(5613890..5614603) Mycobacterium vanbaalenii PYR-1 4645257 YP_956020.1 CDS Mvan_5243 NC_008726.1 5614797 5616878 D KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 5614797..5616878 Mycobacterium vanbaalenii PYR-1 4645258 YP_956021.1 CDS Mvan_5244 NC_008726.1 5617137 5619014 D KEGG: mpa:MAP0970 hypothetical protein; hypothetical protein 5617137..5619014 Mycobacterium vanbaalenii PYR-1 4645259 YP_956022.1 CDS Mvan_5245 NC_008726.1 5619011 5620243 R PFAM: glycosyl transferase, group 1; KEGG: sil:SPO1536 glycosyltransferase, group 1; group 1 glycosyl transferase complement(5619011..5620243) Mycobacterium vanbaalenii PYR-1 4645260 YP_956023.1 CDS Mvan_5246 NC_008726.1 5620240 5621388 R PFAM: glycosyl transferase, group 1; KEGG: rxy:Rxyl_0689 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5620240..5621388) Mycobacterium vanbaalenii PYR-1 4645261 YP_956024.1 CDS Mvan_5247 NC_008726.1 5621399 5622355 R KEGG: aba:Acid345_0535 hypothetical protein; hypothetical protein complement(5621399..5622355) Mycobacterium vanbaalenii PYR-1 4645262 YP_956025.1 CDS Mvan_5248 NC_008726.1 5622355 5623536 R PFAM: glycosyl transferase, group 1; KEGG: sru:SRU_2402 glycosyl transferase; group 1 glycosyl transferase complement(5622355..5623536) Mycobacterium vanbaalenii PYR-1 4645263 YP_956026.1 CDS Mvan_5249 NC_008726.1 5623536 5625551 R PFAM: O-antigen polymerase; KEGG: mxa:MXAN_3026 O-antigen polymerase family protein; O-antigen polymerase complement(5623536..5625551) Mycobacterium vanbaalenii PYR-1 4645264 YP_956027.1 CDS Mvan_5250 NC_008726.1 5625548 5626168 R hypothetical protein complement(5625548..5626168) Mycobacterium vanbaalenii PYR-1 4645265 YP_956028.1 CDS Mvan_5251 NC_008726.1 5626165 5627637 R PFAM: polysaccharide biosynthesis protein; KEGG: hma:pNG7214 probable export protein; polysaccharide biosynthesis protein complement(5626165..5627637) Mycobacterium vanbaalenii PYR-1 4645266 YP_956029.1 CDS Mvan_5252 NC_008726.1 5627689 5629095 D PFAM: glycosyl transferase, group 1; KEGG: cac:CAC3057 glycosyltransferase; group 1 glycosyl transferase 5627689..5629095 Mycobacterium vanbaalenii PYR-1 4645267 YP_956030.1 CDS Mvan_5253 NC_008726.1 5629099 5630256 R KEGG: mmc:Mmcs_4672 lipid-transfer protein; lipid-transfer protein complement(5629099..5630256) Mycobacterium vanbaalenii PYR-1 4645268 YP_956031.1 CDS Mvan_5254 NC_008726.1 5630256 5630657 R KEGG: mmc:Mmcs_4673 MaoC-like dehydratase; MaoC-like dehydratase complement(5630256..5630657) Mycobacterium vanbaalenii PYR-1 4644720 YP_956032.1 CDS Mvan_5255 NC_008726.1 5630654 5631628 R PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4674 protein of unknown function DUF35; hypothetical protein complement(5630654..5631628) Mycobacterium vanbaalenii PYR-1 4644721 YP_956033.1 CDS Mvan_5256 NC_008726.1 5631732 5632895 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4675 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5631732..5632895) Mycobacterium vanbaalenii PYR-1 4644722 YP_956034.1 CDS Mvan_5257 NC_008726.1 5632895 5633896 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4676 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5632895..5633896) Mycobacterium vanbaalenii PYR-1 4644723 YP_956035.1 CDS Mvan_5258 NC_008726.1 5633932 5635191 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_4677 cytochrome P450; cytochrome P450 complement(5633932..5635191) Mycobacterium vanbaalenii PYR-1 4644724 YP_956036.1 CDS Mvan_5259 NC_008726.1 5635313 5636476 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5635313..5636476 Mycobacterium vanbaalenii PYR-1 4644725 YP_956037.1 CDS Mvan_5260 NC_008726.1 5636487 5636870 D KEGG: mpa:MAP0520c hypothetical protein; hypothetical protein 5636487..5636870 Mycobacterium vanbaalenii PYR-1 4644726 YP_956038.1 CDS Mvan_5261 NC_008726.1 5636881 5637387 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0519c hypothetical protein; hypothetical protein 5636881..5637387 Mycobacterium vanbaalenii PYR-1 4644727 YP_956039.1 CDS Mvan_5262 NC_008726.1 5637419 5638684 D PFAM: Phosphoglycerate mutase; KEGG: mbo:Mb0776 PE-PGRS family protein; phosphoglycerate mutase 5637419..5638684 Mycobacterium vanbaalenii PYR-1 4644728 YP_956040.1 CDS Mvan_5263 NC_008726.1 5638789 5639505 D PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein; putative GAF sensor protein 5638789..5639505 Mycobacterium vanbaalenii PYR-1 4644729 YP_956041.1 CDS Mvan_5264 NC_008726.1 5639493 5640398 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4681 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5639493..5640398) Mycobacterium vanbaalenii PYR-1 4644730 YP_956042.1 CDS Mvan_5265 NC_008726.1 5640419 5641216 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4682 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5640419..5641216) Mycobacterium vanbaalenii PYR-1 4644731 YP_956043.1 CDS Mvan_5266 NC_008726.1 5641269 5642024 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5641269..5642024 Mycobacterium vanbaalenii PYR-1 4644732 YP_956044.1 CDS Mvan_5267 NC_008726.1 5642021 5642908 D PFAM: coenzyme A transferase; KEGG: mmc:Mmcs_4684 coenzyme A transferase; coenzyme A transferase 5642021..5642908 Mycobacterium vanbaalenii PYR-1 4644733 YP_956045.1 CDS Mvan_5268 NC_008726.1 5642905 5643654 D KEGG: mmc:Mmcs_4685 putative CoA transferase beta subunit; putative CoA transferase subunit beta 5642905..5643654 Mycobacterium vanbaalenii PYR-1 4644734 YP_956046.1 CDS Mvan_5269 NC_008726.1 5643651 5644721 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4686 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 5643651..5644721 Mycobacterium vanbaalenii PYR-1 4644735 YP_956047.1 CDS Mvan_5270 NC_008726.1 5644789 5645901 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_4689 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 5644789..5645901 Mycobacterium vanbaalenii PYR-1 4644736 YP_956048.1 CDS Mvan_5271 NC_008726.1 5645971 5646885 R TIGRFAM: ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; KEGG: mmc:Mmcs_4193 ectoine hydroxylase; ectoine hydroxylase complement(5645971..5646885) Mycobacterium vanbaalenii PYR-1 4644737 YP_956049.1 CDS ectC NC_008726.1 5646882 5647274 R N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase complement(5646882..5647274) Mycobacterium vanbaalenii PYR-1 4644738 YP_956050.1 CDS Mvan_5273 NC_008726.1 5647315 5648604 R catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase complement(5647315..5648604) Mycobacterium vanbaalenii PYR-1 4644739 YP_956051.1 CDS Mvan_5274 NC_008726.1 5648623 5649207 R TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_4190 L-2,4-diaminobutyric acid acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase complement(5648623..5649207) Mycobacterium vanbaalenii PYR-1 4644740 YP_956052.1 CDS Mvan_5275 NC_008726.1 5649665 5651566 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cef:CE2267 putative purine permease; uracil-xanthine permease 5649665..5651566 Mycobacterium vanbaalenii PYR-1 4644741 YP_956053.1 CDS Mvan_5276 NC_008726.1 5651563 5652060 D KEGG: nfa:nfa52440 hypothetical protein; putative OHCU decarboxylase 5651563..5652060 Mycobacterium vanbaalenii PYR-1 4644742 YP_956054.1 CDS Mvan_5277 NC_008726.1 5652133 5652450 D PFAM: Transthyretin; KEGG: nfa:nfa52430 hypothetical protein; transthyretin 5652133..5652450 Mycobacterium vanbaalenii PYR-1 4644743 YP_956055.1 CDS Mvan_5278 NC_008726.1 5652453 5653640 D PFAM: monooxygenase, FAD-binding; KEGG: aci:ACIAD3540 putative flavoprotein monooxygenase acting on aromatic compound; FAD-binding monooxygenase 5652453..5653640 Mycobacterium vanbaalenii PYR-1 4644744 YP_956056.1 CDS Mvan_5279 NC_008726.1 5653627 5654970 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gad; guanine aminohydrolase; amidohydrolase complement(5653627..5654970) Mycobacterium vanbaalenii PYR-1 4644745 YP_956057.1 CDS Mvan_5280 NC_008726.1 5655057 5655884 D PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bja:blr6160 hypothetical protein; FAD-binding molybdopterin dehydrogenase 5655057..5655884 Mycobacterium vanbaalenii PYR-1 4644670 YP_956058.1 CDS Mvan_5281 NC_008726.1 5655881 5658580 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: nfa:nfa52390 putative oxidoreductase; aldehyde oxidase and xanthine dehydrogenase 5655881..5658580 Mycobacterium vanbaalenii PYR-1 4644671 YP_956059.1 CDS Mvan_5282 NC_008726.1 5658564 5659712 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(5658564..5659712) Mycobacterium vanbaalenii PYR-1 4644672 YP_956060.1 CDS Mvan_5283 NC_008726.1 5659705 5660331 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4691 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(5659705..5660331) Mycobacterium vanbaalenii PYR-1 4644673 YP_956061.1 CDS Mvan_5284 NC_008726.1 5660328 5661119 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4692 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(5660328..5661119) Mycobacterium vanbaalenii PYR-1 4644674 YP_956062.1 CDS Mvan_5285 NC_008726.1 5661148 5662302 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4693 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5661148..5662302) Mycobacterium vanbaalenii PYR-1 4644675 YP_956063.1 CDS Mvan_5286 NC_008726.1 5662361 5663932 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 5662361..5663932 Mycobacterium vanbaalenii PYR-1 4644676 YP_956064.1 CDS Mvan_5287 NC_008726.1 5663934 5665058 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4695 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5663934..5665058 Mycobacterium vanbaalenii PYR-1 4644677 YP_956065.1 CDS Mvan_5288 NC_008726.1 5665065 5666024 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5665065..5666024 Mycobacterium vanbaalenii PYR-1 4644678 YP_956066.1 CDS Mvan_5289 NC_008726.1 5666021 5666962 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4697 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 5666021..5666962 Mycobacterium vanbaalenii PYR-1 4644679 YP_956067.1 CDS Mvan_5290 NC_008726.1 5666972 5668126 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 5666972..5668126 Mycobacterium vanbaalenii PYR-1 4644680 YP_956068.1 CDS Mvan_5291 NC_008726.1 5668136 5669413 R PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1920 putative ABC transporter transmembrane transport protein; inner-membrane translocator complement(5668136..5669413) Mycobacterium vanbaalenii PYR-1 4644681 YP_956069.1 CDS Mvan_5292 NC_008726.1 5669455 5670237 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV2246 putative ABC transporter ATP-binding protein; ABC transporter--like protein complement(5669455..5670237) Mycobacterium vanbaalenii PYR-1 4644682 YP_956070.1 CDS Mvan_5293 NC_008726.1 5670237 5671307 R KEGG: tfu:Tfu_1922 solute-binding protein; solute-binding protein complement(5670237..5671307) Mycobacterium vanbaalenii PYR-1 4644683 YP_956071.1 CDS Mvan_5294 NC_008726.1 5671390 5672613 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(5671390..5672613) Mycobacterium vanbaalenii PYR-1 4644684 YP_956072.1 CDS Mvan_5295 NC_008726.1 5672669 5673883 D PFAM: ROK family protein; KEGG: sma:SAV7180 xylose repressor, ROK-family transcriptional regulator; ROK family protein 5672669..5673883 Mycobacterium vanbaalenii PYR-1 4644685 YP_956073.1 CDS Mvan_5296 NC_008726.1 5673885 5675279 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2519 xylulokinase; xylulokinase 5673885..5675279 Mycobacterium vanbaalenii PYR-1 4644686 YP_956074.1 CDS Mvan_5297 NC_008726.1 5675448 5676740 D KEGG: mmc:Mmcs_4699 hypothetical protein; hypothetical protein 5675448..5676740 Mycobacterium vanbaalenii PYR-1 4644687 YP_956075.1 CDS Mvan_5298 NC_008726.1 5676754 5678652 R AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase complement(5676754..5678652) Mycobacterium vanbaalenii PYR-1 4644688 YP_956076.1 CDS Mvan_5299 NC_008726.1 5678649 5679407 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4701 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5678649..5679407) Mycobacterium vanbaalenii PYR-1 4644689 YP_956077.1 CDS Mvan_5300 NC_008726.1 5679404 5680774 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4702 general substrate transporter; major facilitator superfamily transporter complement(5679404..5680774) Mycobacterium vanbaalenii PYR-1 4644690 YP_956078.1 CDS Mvan_5301 NC_008726.1 5680823 5681794 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_4703 transcriptional regulator, LysR family; LysR family transcriptional regulator 5680823..5681794 Mycobacterium vanbaalenii PYR-1 4644691 YP_956079.1 CDS Mvan_5302 NC_008726.1 5681804 5682571 D PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa46770 hypothetical protein; alpha/beta hydrolase fold protein 5681804..5682571 Mycobacterium vanbaalenii PYR-1 4644692 YP_956080.1 CDS Mvan_5303 NC_008726.1 5682585 5683148 R PFAM: regulatory protein, TetR; KEGG: nfa:nfa27450 putative transcriptional regulator; TetR family transcriptional regulator complement(5682585..5683148) Mycobacterium vanbaalenii PYR-1 4644693 YP_956081.1 CDS Mvan_5304 NC_008726.1 5683233 5683712 D KEGG: sco:SCO3806 hypothetical protein; hypothetical protein 5683233..5683712 Mycobacterium vanbaalenii PYR-1 4644694 YP_956082.1 CDS Mvan_5305 NC_008726.1 5683709 5684275 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: mmc:Mmcs_4706 flavin reductase-like, FMN-binding protein; flavin reductase domain-containing protein complement(5683709..5684275) Mycobacterium vanbaalenii PYR-1 4644430 YP_956083.1 CDS Mvan_5306 NC_008726.1 5684287 5685189 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4707 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(5684287..5685189) Mycobacterium vanbaalenii PYR-1 4644431 YP_956084.1 CDS Mvan_5307 NC_008726.1 5685193 5686080 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_4708 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5685193..5686080) Mycobacterium vanbaalenii PYR-1 4644432 YP_956085.1 CDS Mvan_5308 NC_008726.1 5686081 5687265 R PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4709 acyl-CoA dehydrogenase, type 2-like protein; acyl-CoA dehydrogenase type 2 complement(5686081..5687265) Mycobacterium vanbaalenii PYR-1 4644433 YP_956086.1 CDS Mvan_5309 NC_008726.1 5687427 5688497 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_4710 ferredoxin; ferredoxin 5687427..5688497 Mycobacterium vanbaalenii PYR-1 4644434 YP_956087.1 CDS Mvan_5310 NC_008726.1 5688487 5689104 D KEGG: mmc:Mmcs_4711 hypothetical protein; hypothetical protein 5688487..5689104 Mycobacterium vanbaalenii PYR-1 4644435 YP_956088.1 CDS Mvan_5311 NC_008726.1 5689111 5691261 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4712 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(5689111..5691261) Mycobacterium vanbaalenii PYR-1 4644436 YP_956089.1 CDS Mvan_5312 NC_008726.1 5691458 5692165 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4713 transcriptional regulator, TetR family; TetR family transcriptional regulator 5691458..5692165 Mycobacterium vanbaalenii PYR-1 4644437 YP_956090.1 CDS Mvan_5313 NC_008726.1 5692169 5692927 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: mmc:Mmcs_4714 HAD-superfamily hydrolase subfamily IIB; HAD family hydrolase 5692169..5692927 Mycobacterium vanbaalenii PYR-1 4644438 YP_956091.1 CDS Mvan_5314 NC_008726.1 5692937 5693602 D PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP3730 hypothetical protein; type 11 methyltransferase 5692937..5693602 Mycobacterium vanbaalenii PYR-1 4644439 YP_956092.1 CDS Mvan_5315 NC_008726.1 5693636 5693872 R TIGRFAM: redox-active disulfide protein 2; KEGG: det:DET1007 redox-active disulfide protein 2; redox-active disulfide protein 2 complement(5693636..5693872) Mycobacterium vanbaalenii PYR-1 4644440 YP_956093.1 CDS Mvan_5316 NC_008726.1 5693911 5694975 R PFAM: permease; KEGG: chy:CHY_1097 permease family protein; permease complement(5693911..5694975) Mycobacterium vanbaalenii PYR-1 4644441 YP_956094.1 CDS Mvan_5317 NC_008726.1 5695062 5696162 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: mmc:Mmcs_4716 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator complement(5695062..5696162) Mycobacterium vanbaalenii PYR-1 4644442 YP_956095.1 CDS Mvan_5318 NC_008726.1 5696212 5697069 R PFAM: ABC-3 protein; KEGG: mmc:Mmcs_4717 ABC-3; ABC-3 protein complement(5696212..5697069) Mycobacterium vanbaalenii PYR-1 4644443 YP_956096.1 CDS Mvan_5319 NC_008726.1 5697066 5697854 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4718 ABC transporter related; ABC transporter--like protein complement(5697066..5697854) Mycobacterium vanbaalenii PYR-1 4644444 YP_956097.1 CDS Mvan_5320 NC_008726.1 5697841 5698872 R PFAM: periplasmic solute binding protein; KEGG: mmc:Mmcs_4719 periplasmic solute binding protein; periplasmic solute binding protein complement(5697841..5698872) Mycobacterium vanbaalenii PYR-1 4644445 YP_956098.1 CDS Mvan_5321 NC_008726.1 5698941 5700107 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: nfa:nfa53180 putative GTPase; cobalamin synthesis protein, P47K 5698941..5700107 Mycobacterium vanbaalenii PYR-1 4644446 YP_956099.1 CDS Mvan_5322 NC_008726.1 5700115 5700960 R PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_4720 thiosulfate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase complement(5700115..5700960) Mycobacterium vanbaalenii PYR-1 4644447 YP_956100.1 CDS Mvan_5323 NC_008726.1 5700981 5702174 R KEGG: mmc:Mmcs_4722 hypothetical protein; hypothetical protein complement(5700981..5702174) Mycobacterium vanbaalenii PYR-1 4644448 YP_956101.1 CDS Mvan_5324 NC_008726.1 5702213 5703121 R PFAM: periplasmic solute binding protein; KEGG: nfa:nfa23270 putative transporter; periplasmic solute binding protein complement(5702213..5703121) Mycobacterium vanbaalenii PYR-1 4644449 YP_956102.1 CDS Mvan_5325 NC_008726.1 5703118 5705112 R PFAM: ABC-3 protein; KEGG: nfa:nfa23260 putative ABC transporter; ABC-3 protein complement(5703118..5705112) Mycobacterium vanbaalenii PYR-1 4644450 YP_956103.1 CDS Mvan_5326 NC_008726.1 5705133 5705789 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4726 ABC transporter related; ABC transporter--like protein 5705133..5705789 Mycobacterium vanbaalenii PYR-1 4644451 YP_956104.1 CDS Mvan_5327 NC_008726.1 5705800 5706564 D PFAM: LamB/YcsF family protein; KEGG: mmc:Mmcs_4727 LamB/YcsF; LamB/YcsF family protein 5705800..5706564 Mycobacterium vanbaalenii PYR-1 4644452 YP_956105.1 CDS Mvan_5328 NC_008726.1 5706557 5706892 R SMART: regulatory protein, ArsR; KEGG: mmc:Mmcs_4728 putative transcriptional regulator, ArsR family; regulatory protein ArsR complement(5706557..5706892) Mycobacterium vanbaalenii PYR-1 4644453 YP_956106.1 CDS Mvan_5329 NC_008726.1 5706996 5708192 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4729 major facilitator superfamily MFS_1; major facilitator superfamily transporter 5706996..5708192 Mycobacterium vanbaalenii PYR-1 4644454 YP_956107.1 CDS Mvan_5330 NC_008726.1 5708363 5709361 D PFAM: permease; KEGG: mpa:MAP3766 hypothetical protein; permease 5708363..5709361 Mycobacterium vanbaalenii PYR-1 4644455 YP_956108.1 CDS Mvan_5331 NC_008726.1 5709358 5710074 D KEGG: nfa:nfa40590 hypothetical protein; hypothetical protein 5709358..5710074 Mycobacterium vanbaalenii PYR-1 4647765 YP_956109.1 CDS Mvan_5332 NC_008726.1 5710158 5711375 D PFAM: cobalamin synthesis CobW domain protein; KEGG: mmc:Mmcs_4732 cobalamin synthesis CobW-like protein; cobalamin synthesis protein CobW 5710158..5711375 Mycobacterium vanbaalenii PYR-1 4647766 YP_956110.1 CDS rpmE2 NC_008726.1 5711362 5711637 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(5711362..5711637) Mycobacterium vanbaalenii PYR-1 4647767 YP_956111.1 CDS Mvan_5334 NC_008726.1 5711761 5712021 D PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_3485 ANTAR; response regulator receiver/ANTAR domain-containing protein 5711761..5712021 Mycobacterium vanbaalenii PYR-1 4647768 YP_956112.1 CDS Mvan_5335 NC_008726.1 5712077 5712991 D KEGG: mmc:Mmcs_4733 hypothetical protein; hypothetical protein 5712077..5712991 Mycobacterium vanbaalenii PYR-1 4647769 YP_956113.1 CDS Mvan_5336 NC_008726.1 5712982 5714223 D PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mmc:Mmcs_4735 arsenical pump membrane protein; arsenical pump membrane protein 5712982..5714223 Mycobacterium vanbaalenii PYR-1 4647770 YP_956114.1 CDS Mvan_5337 NC_008726.1 5714220 5715164 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: mmc:Mmcs_4736 RNA methyltransferase TrmH, group 3; RNA methyltransferase complement(5714220..5715164) Mycobacterium vanbaalenii PYR-1 4647771 YP_956115.1 CDS cysS NC_008726.1 5715165 5716556 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(5715165..5716556) Mycobacterium vanbaalenii PYR-1 4647772 YP_956116.1 CDS ispF NC_008726.1 5716604 5717092 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(5716604..5717092) Mycobacterium vanbaalenii PYR-1 4647773 YP_956117.1 CDS Mvan_5340 NC_008726.1 5717116 5717604 R PFAM: transcription factor CarD; KEGG: mpa:MAP0475 CarD family transcriptional regulator; CarD family transcriptional regulator complement(5717116..5717604) Mycobacterium vanbaalenii PYR-1 4647774 YP_956118.1 CDS Mvan_5341 NC_008726.1 5717877 5718464 D KEGG: mmc:Mmcs_4741 hypothetical protein; hypothetical protein 5717877..5718464 Mycobacterium vanbaalenii PYR-1 4647775 YP_956119.1 CDS Mvan_5342 NC_008726.1 5718534 5719922 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 5718534..5719922 Mycobacterium vanbaalenii PYR-1 4647776 YP_956120.1 CDS Mvan_5343 NC_008726.1 5719950 5721071 D non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 5719950..5721071 Mycobacterium vanbaalenii PYR-1 4647777 YP_956121.1 CDS Mvan_5344 NC_008726.1 5721074 5721850 R KEGG: mmc:Mmcs_4744 hypothetical protein; hypothetical protein complement(5721074..5721850) Mycobacterium vanbaalenii PYR-1 4647778 YP_956122.1 CDS Mvan_5345 NC_008726.1 5721909 5722529 R PFAM: carbonic anhydrase; KEGG: mtc:MT3694 carbonic anhydrase; carbonic anhydrase complement(5721909..5722529) Mycobacterium vanbaalenii PYR-1 4647779 YP_956123.1 CDS Mvan_5346 NC_008726.1 5722558 5723430 D PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mpa:MAP0469c A/G-specific adenine glycosylase; HhH-GPD family protein 5722558..5723430 Mycobacterium vanbaalenii PYR-1 4647780 YP_956124.1 CDS Mvan_5347 NC_008726.1 5723431 5724333 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_4269 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(5723431..5724333) Mycobacterium vanbaalenii PYR-1 4647781 YP_956125.1 CDS Mvan_5348 NC_008726.1 5724330 5725517 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_4268 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5724330..5725517) Mycobacterium vanbaalenii PYR-1 4647782 YP_956126.1 CDS Mvan_5349 NC_008726.1 5725578 5726555 R PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_4748 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(5725578..5726555) Mycobacterium vanbaalenii PYR-1 4647783 YP_956127.1 CDS Mvan_5350 NC_008726.1 5726628 5726879 D KEGG: mmc:Mmcs_4749 hypothetical protein; hypothetical protein 5726628..5726879 Mycobacterium vanbaalenii PYR-1 4647784 YP_956128.1 CDS Mvan_5351 NC_008726.1 5726853 5727617 R PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb3622c putative hydrolase; alpha/beta hydrolase fold protein complement(5726853..5727617) Mycobacterium vanbaalenii PYR-1 4647785 YP_956129.1 CDS Mvan_5352 NC_008726.1 5727627 5727980 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mmc:Mmcs_4751 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 5727627..5727980 Mycobacterium vanbaalenii PYR-1 4647786 YP_956130.1 CDS Mvan_5353 NC_008726.1 5727961 5729325 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_4752 putative conserved lipoprotein LpqF; beta-lactamase 5727961..5729325 Mycobacterium vanbaalenii PYR-1 4647787 YP_956131.1 CDS Mvan_5354 NC_008726.1 5729326 5729883 R PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_4753 phosphoglycerate mutase; phosphoglycerate mutase complement(5729326..5729883) Mycobacterium vanbaalenii PYR-1 4647788 YP_956132.1 CDS Mvan_5355 NC_008726.1 5729890 5730690 R KEGG: mmc:Mmcs_4754 hypothetical protein; hypothetical protein complement(5729890..5730690) Mycobacterium vanbaalenii PYR-1 4647789 YP_956133.1 CDS Mvan_5356 NC_008726.1 5730718 5730933 R KEGG: mmc:Mmcs_4755 hypothetical protein; hypothetical protein complement(5730718..5730933) Mycobacterium vanbaalenii PYR-1 4647790 YP_956134.1 CDS Mvan_5357 NC_008726.1 5731104 5732741 R PFAM: transposase, IS4 family protein; KEGG: cdi:DIP0047 putative transposase (pseudogene); transposase, IS4 family protein complement(5731104..5732741) Mycobacterium vanbaalenii PYR-1 4647073 YP_956135.1 CDS Mvan_5358 NC_008726.1 5732997 5735540 R PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_4756 ATPase AAA-2; ATPase complement(5732997..5735540) Mycobacterium vanbaalenii PYR-1 4647074 YP_956136.1 CDS Mvan_5359 NC_008726.1 5735836 5736243 R KEGG: mmc:Mmcs_4757 Lsr2; hypothetical protein complement(5735836..5736243) Mycobacterium vanbaalenii PYR-1 4647075 YP_956137.1 CDS lysS NC_008726.1 5736285 5737814 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(5736285..5737814) Mycobacterium vanbaalenii PYR-1 4647076 YP_956138.1 CDS Mvan_5361 NC_008726.1 5737814 5739091 D KEGG: mmc:Mmcs_4759 hypothetical protein; hypothetical protein 5737814..5739091 Mycobacterium vanbaalenii PYR-1 4647077 YP_956139.1 CDS Mvan_5362 NC_008726.1 5739092 5739907 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(5739092..5739907) Mycobacterium vanbaalenii PYR-1 4647078 YP_956140.1 CDS Mvan_5363 NC_008726.1 5739912 5740319 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(5739912..5740319) Mycobacterium vanbaalenii PYR-1 4647079 YP_956141.1 CDS panC NC_008726.1 5740319 5741254 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(5740319..5741254) Mycobacterium vanbaalenii PYR-1 4647080 YP_956142.1 CDS Mvan_5365 NC_008726.1 5741251 5742198 R KEGG: mmc:Mmcs_4763 NAD-dependent glycerol-3-phosphate dehydrogenase-like protein; NAD-dependent glycerol-3-phosphate dehydrogenase-like protein complement(5741251..5742198) Mycobacterium vanbaalenii PYR-1 4647081 YP_956143.1 CDS Mvan_5366 NC_008726.1 5742278 5743468 R KEGG: mmc:Mmcs_4764 hypothetical protein; hypothetical protein complement(5742278..5743468) Mycobacterium vanbaalenii PYR-1 4647082 YP_956144.1 CDS Mvan_5367 NC_008726.1 5743546 5744022 R KEGG: mpa:MAP0453 hypothetical protein; hypothetical protein complement(5743546..5744022) Mycobacterium vanbaalenii PYR-1 4647083 YP_956145.1 CDS Mvan_5368 NC_008726.1 5744022 5744549 R KEGG: mmc:Mmcs_4766 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(5744022..5744549) Mycobacterium vanbaalenii PYR-1 4647084 YP_956146.1 CDS Mvan_5369 NC_008726.1 5744546 5744920 R TIGRFAM: dihydroneopterin aldolase; KEGG: mmc:Mmcs_4767 dihydroneopterin aldolase; dihydroneopterin aldolase complement(5744546..5744920) Mycobacterium vanbaalenii PYR-1 4647085 YP_956147.1 CDS Mvan_5370 NC_008726.1 5744913 5745719 R KEGG: mmc:Mmcs_4768 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase complement(5744913..5745719) Mycobacterium vanbaalenii PYR-1 4647086 YP_956148.1 CDS folE NC_008726.1 5745764 5746372 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(5745764..5746372) Mycobacterium vanbaalenii PYR-1 4647087 YP_956149.1 CDS Mvan_5372 NC_008726.1 5746392 5748737 R KEGG: mmc:Mmcs_4770 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(5746392..5748737) Mycobacterium vanbaalenii PYR-1 4647088 YP_956150.1 CDS Mvan_5373 NC_008726.1 5749083 5750096 D PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT3719 epoxide hydrolase; alpha/beta hydrolase fold protein 5749083..5750096 Mycobacterium vanbaalenii PYR-1 4647089 YP_956151.1 CDS Mvan_5374 NC_008726.1 5750177 5751586 D PFAM: regulatory protein, TetR; PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein; TetR family transcriptional regulator 5750177..5751586 Mycobacterium vanbaalenii PYR-1 4647090 YP_956152.1 CDS Mvan_5375 NC_008726.1 5751653 5752390 D PFAM: protein of unknown function DUF541; KEGG: mmc:Mmcs_4774 protein of unknown function DUF541; hypothetical protein 5751653..5752390 Mycobacterium vanbaalenii PYR-1 4647091 YP_956153.1 CDS Mvan_5376 NC_008726.1 5752387 5754606 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sma:SAV6590 dehydrogenase; molydopterin dinucleotide-binding region complement(5752387..5754606) Mycobacterium vanbaalenii PYR-1 4647092 YP_956154.1 CDS Mvan_5377 NC_008726.1 5754622 5755206 R KEGG: mmc:Mmcs_4775 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(5754622..5755206) Mycobacterium vanbaalenii PYR-1 4647093 YP_956155.1 CDS Mvan_5378 NC_008726.1 5755210 5756181 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mbo:Mb3649c possible cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase complement(5755210..5756181) Mycobacterium vanbaalenii PYR-1 4647094 YP_956156.1 CDS Mvan_5379 NC_008726.1 5756160 5757230 R KEGG: mmc:Mmcs_4777 hypothetical protein; hypothetical protein complement(5756160..5757230) Mycobacterium vanbaalenii PYR-1 4647095 YP_956157.1 CDS Mvan_5380 NC_008726.1 5757230 5758603 R TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: mmc:Mmcs_4778 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(5757230..5758603) Mycobacterium vanbaalenii PYR-1 4647096 YP_956158.1 CDS Mvan_5381 NC_008726.1 5758751 5759236 D PFAM: Inorganic pyrophosphatase; KEGG: mpa:MAP0435c inorganic pyrophosphatase; inorganic diphosphatase 5758751..5759236 Mycobacterium vanbaalenii PYR-1 4647097 YP_956159.1 CDS Mvan_5382 NC_008726.1 5759363 5759881 D KEGG: mmc:Mmcs_4780 hypothetical protein; putative OHCU decarboxylase 5759363..5759881 Mycobacterium vanbaalenii PYR-1 4648061 YP_956160.1 CDS Mvan_5383 NC_008726.1 5759897 5761069 D PFAM: beta-lactamase; KEGG: afm:Afu5g09790 beta-lactamase; beta-lactamase 5759897..5761069 Mycobacterium vanbaalenii PYR-1 4648062 YP_956161.1 CDS Mvan_5384 NC_008726.1 5761051 5761434 R KEGG: mmc:Mmcs_4784 hypothetical protein; hypothetical protein complement(5761051..5761434) Mycobacterium vanbaalenii PYR-1 4648063 YP_956162.1 CDS Mvan_5385 NC_008726.1 5761517 5762542 R PFAM: Integral membrane protein TerC; KEGG: mmc:Mmcs_4785 integral membrane protein TerC; integral membrane protein TerC complement(5761517..5762542) Mycobacterium vanbaalenii PYR-1 4648064 YP_956163.1 CDS Mvan_5386 NC_008726.1 5762762 5766718 D TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_4786 non-ribosomal peptide synthetase-like protein; non-ribosomal peptide synthetase 5762762..5766718 Mycobacterium vanbaalenii PYR-1 4648065 YP_956164.1 CDS Mvan_5387 NC_008726.1 5766715 5768061 D PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mmc:Mmcs_4787 peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 5766715..5768061 Mycobacterium vanbaalenii PYR-1 4648066 YP_956165.1 CDS Mvan_5388 NC_008726.1 5768058 5769341 D KEGG: mmc:Mmcs_4788 putative conserved integral membrane protein; putative integral membrane protein 5768058..5769341 Mycobacterium vanbaalenii PYR-1 4648067 YP_956166.1 CDS Mvan_5389 NC_008726.1 5769338 5770318 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4789 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 5769338..5770318 Mycobacterium vanbaalenii PYR-1 4648068 YP_956167.1 CDS Mvan_5390 NC_008726.1 5770327 5772090 D KEGG: mmc:Mmcs_4790 hypothetical protein; hypothetical protein 5770327..5772090 Mycobacterium vanbaalenii PYR-1 4648069 YP_956168.1 CDS Mvan_5391 NC_008726.1 5772196 5772699 D KEGG: mbo:Mb2062 hypothetical protein; hypothetical protein 5772196..5772699 Mycobacterium vanbaalenii PYR-1 4648070 YP_956169.1 CDS Mvan_5392 NC_008726.1 5772774 5773172 R KEGG: mbo:Mb2042 hypothetical protein; hypothetical protein complement(5772774..5773172) Mycobacterium vanbaalenii PYR-1 4648071 YP_956170.1 CDS Mvan_5393 NC_008726.1 5773150 5773815 R KEGG: fra:Francci3_0955 conserved hypothetical protein; hypothetical protein complement(5773150..5773815) Mycobacterium vanbaalenii PYR-1 4648072 YP_956171.1 CDS Mvan_5394 NC_008726.1 5774207 5775430 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(5774207..5775430) Mycobacterium vanbaalenii PYR-1 4648074 YP_956172.1 CDS Mvan_5395 NC_008726.1 5775513 5777111 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_4795 adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 5775513..5777111 Mycobacterium vanbaalenii PYR-1 4648075 YP_956173.1 CDS Mvan_5396 NC_008726.1 5777114 5779981 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(5777114..5779981) Mycobacterium vanbaalenii PYR-1 4648076 YP_956174.1 CDS Mvan_5397 NC_008726.1 5780117 5780785 R KEGG: mmc:Mmcs_4797 hypothetical protein; hypothetical protein complement(5780117..5780785) Mycobacterium vanbaalenii PYR-1 4648077 YP_956175.1 CDS Mvan_5398 NC_008726.1 5780840 5781043 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mmc:Mmcs_4798 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(5780840..5781043) Mycobacterium vanbaalenii PYR-1 4648078 YP_956176.1 CDS Mvan_5399 NC_008726.1 5781323 5783671 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_4799 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 5781323..5783671 Mycobacterium vanbaalenii PYR-1 4648079 YP_956177.1 CDS Mvan_5400 NC_008726.1 5783713 5784795 D KEGG: mmc:Mmcs_4800 hypothetical protein; hypothetical protein 5783713..5784795 Mycobacterium vanbaalenii PYR-1 4648080 YP_956178.1 CDS Mvan_5401 NC_008726.1 5784807 5786027 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_5395 serine/threonine protein kinase; protein kinase complement(5784807..5786027) Mycobacterium vanbaalenii PYR-1 4648081 YP_956179.1 CDS Mvan_5402 NC_008726.1 5786147 5786446 R KEGG: mmc:Mmcs_4801 hypothetical protein; hypothetical protein complement(5786147..5786446) Mycobacterium vanbaalenii PYR-1 4648082 YP_956180.1 CDS Mvan_5403 NC_008726.1 5786493 5786774 R KEGG: mbo:Mb3679c hypothetical protein; hypothetical protein complement(5786493..5786774) Mycobacterium vanbaalenii PYR-1 4648083 YP_956181.1 CDS Mvan_5404 NC_008726.1 5786819 5787019 R KEGG: mmc:Mmcs_4802 hypothetical protein; hypothetical protein complement(5786819..5787019) Mycobacterium vanbaalenii PYR-1 4648084 YP_956182.1 CDS Mvan_5405 NC_008726.1 5787041 5787616 R PFAM: type II secretion system protein; KEGG: mmc:Mmcs_4803 type II secretion system protein; type II secretion system protein complement(5787041..5787616) Mycobacterium vanbaalenii PYR-1 4648085 YP_956183.1 CDS Mvan_5406 NC_008726.1 5787613 5788395 R KEGG: mmc:Mmcs_4804 type II secretion system protein; type II secretion system protein complement(5787613..5788395) Mycobacterium vanbaalenii PYR-1 4646599 YP_956184.1 CDS Mvan_5408 NC_008726.1 5788927 5789403 D KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein 5788927..5789403 Mycobacterium vanbaalenii PYR-1 4646601 YP_956185.1 CDS Mvan_5409 NC_008726.1 5789477 5789845 R hypothetical protein complement(5789477..5789845) Mycobacterium vanbaalenii PYR-1 4646602 YP_956186.1 CDS Mvan_5410 NC_008726.1 5789884 5790291 R PFAM: protein of unknown function DUF302; KEGG: mmc:Mmcs_4018 protein of unknown function DUF302; hypothetical protein complement(5789884..5790291) Mycobacterium vanbaalenii PYR-1 4646603 YP_956187.1 CDS Mvan_5411 NC_008726.1 5790309 5792291 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mbo:Mb2015c probable metal cation transporter P-type ATPase G CtpG; heavy metal translocating P-type ATPase complement(5790309..5792291) Mycobacterium vanbaalenii PYR-1 4646604 YP_956188.1 CDS Mvan_5412 NC_008726.1 5792284 5792661 R PFAM: regulatory protein, ArsR; KEGG: nfa:pnf1320 putative transcriptional regulator; regulatory protein ArsR complement(5792284..5792661) Mycobacterium vanbaalenii PYR-1 4646605 YP_956189.1 CDS Mvan_5413 NC_008726.1 5792816 5793079 D KEGG: nfa:pnf1300 hypothetical protein; hypothetical protein 5792816..5793079 Mycobacterium vanbaalenii PYR-1 4646606 YP_956190.1 CDS Mvan_5414 NC_008726.1 5793085 5793864 D KEGG: mlo:mlr6585 hypothetical protein; hypothetical protein 5793085..5793864 Mycobacterium vanbaalenii PYR-1 4646607 YP_956191.1 CDS Mvan_5415 NC_008726.1 5793877 5794284 D KEGG: sco:SCO3621 serine-threonine protein kinase; hypothetical protein 5793877..5794284 Mycobacterium vanbaalenii PYR-1 4646608 YP_956192.1 CDS Mvan_5416 NC_008726.1 5794707 5795429 D hypothetical protein 5794707..5795429 Mycobacterium vanbaalenii PYR-1 4646609 YP_956193.1 CDS Mvan_5417 NC_008726.1 5795479 5796723 D PFAM: protein of unknown function DUF955; KEGG: bbr:BB2493 putative phage-related DNA-binding protein; hypothetical protein 5795479..5796723 Mycobacterium vanbaalenii PYR-1 4646610 YP_956194.1 CDS Mvan_5418 NC_008726.1 5796746 5797945 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mmc:Mmcs_5577 phage integrase; phage integrase family protein 5796746..5797945 Mycobacterium vanbaalenii PYR-1 4646611 YP_956195.1 CDS Mvan_5419 NC_008726.1 5797954 5800179 D PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein 5797954..5800179 Mycobacterium vanbaalenii PYR-1 4646612 YP_956196.1 CDS Mvan_5420 NC_008726.1 5800176 5800610 D KEGG: mmc:Mmcs_5579 Tn554 transposase C; Tn554 transposase C 5800176..5800610 Mycobacterium vanbaalenii PYR-1 4646613 YP_956197.1 CDS Mvan_5421 NC_008726.1 5800507 5801703 R PFAM: type II secretion system protein E; KEGG: mmc:Mmcs_4805 type II secretion system protein E; type II secretion system protein E complement(5800507..5801703) Mycobacterium vanbaalenii PYR-1 4646614 YP_956198.1 CDS Mvan_5422 NC_008726.1 5801700 5802797 R KEGG: mmc:Mmcs_4806 hypothetical protein; hypothetical protein complement(5801700..5802797) Mycobacterium vanbaalenii PYR-1 4646615 YP_956199.1 CDS Mvan_5423 NC_008726.1 5803131 5804072 D TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_4807 HAD-superfamily subfamily IB, PSPase-like protein; HAD family hydrolase 5803131..5804072 Mycobacterium vanbaalenii PYR-1 4646616 YP_956200.1 CDS Mvan_5424 NC_008726.1 5804535 5805326 R KEGG: mmc:Mmcs_4808 hypothetical protein; hypothetical protein complement(5804535..5805326) Mycobacterium vanbaalenii PYR-1 4646617 YP_956201.1 CDS Mvan_5425 NC_008726.1 5805435 5807426 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 5805435..5807426 Mycobacterium vanbaalenii PYR-1 4646618 YP_956202.1 CDS Mvan_5426 NC_008726.1 5807427 5807831 D KEGG: mpa:MAP0633 hypothetical protein; hypothetical protein 5807427..5807831 Mycobacterium vanbaalenii PYR-1 4646619 YP_956203.1 CDS Mvan_5427 NC_008726.1 5807833 5808540 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: mmc:Mmcs_4810 putative protease; peptidase S1 and S6, chymotrypsin/Hap complement(5807833..5808540) Mycobacterium vanbaalenii PYR-1 4646620 YP_956204.1 CDS Mvan_5428 NC_008726.1 5808658 5809185 D PFAM: protein of unknown function DUF1469; KEGG: mmc:Mmcs_4811 protein of unknown function DUF1469; hypothetical protein 5808658..5809185 Mycobacterium vanbaalenii PYR-1 4646621 YP_956205.1 CDS Mvan_5429 NC_008726.1 5809185 5810144 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_4812 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5809185..5810144 Mycobacterium vanbaalenii PYR-1 4646622 YP_956206.1 CDS Mvan_5430 NC_008726.1 5810141 5811334 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: mmc:Mmcs_4813 colicin V production protein; colicin V production protein complement(5810141..5811334) Mycobacterium vanbaalenii PYR-1 4646623 YP_956207.1 CDS Mvan_5431 NC_008726.1 5811331 5812113 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4814 NUDIX hydrolase; NUDIX hydrolase complement(5811331..5812113) Mycobacterium vanbaalenii PYR-1 4644543 YP_956208.1 CDS Mvan_5432 NC_008726.1 5812110 5812733 R PFAM: Redoxin domain protein; KEGG: mmc:Mmcs_4815 redoxin; redoxin domain-containing protein complement(5812110..5812733) Mycobacterium vanbaalenii PYR-1 4644544 YP_956209.1 CDS Mvan_5433 NC_008726.1 5812777 5813553 R KEGG: mmc:Mmcs_4816 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III complement(5812777..5813553) Mycobacterium vanbaalenii PYR-1 4644545 YP_956210.1 CDS Mvan_5434 NC_008726.1 5813659 5813991 D KEGG: mbo:Mb3699 possible membrane protein; hypothetical protein 5813659..5813991 Mycobacterium vanbaalenii PYR-1 4644546 YP_956211.1 CDS Mvan_5435 NC_008726.1 5814092 5814766 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mmc:Mmcs_4818 transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator 5814092..5814766 Mycobacterium vanbaalenii PYR-1 4644547 YP_956212.1 CDS Mvan_5436 NC_008726.1 5814840 5815613 R PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_4819 beta-lactamase-like protein; beta-lactamase domain-containing protein complement(5814840..5815613) Mycobacterium vanbaalenii PYR-1 4644548 YP_956213.1 CDS Mvan_5437 NC_008726.1 5815614 5816072 R PFAM: Endoribonuclease L-PSP; KEGG: mmc:Mmcs_4820 endoribonuclease L-PSP; endoribonuclease L-PSP complement(5815614..5816072) Mycobacterium vanbaalenii PYR-1 4644549 YP_956214.1 CDS Mvan_5438 NC_008726.1 5816069 5816230 R KEGG: mmc:Mmcs_4821 hypothetical protein; hypothetical protein complement(5816069..5816230) Mycobacterium vanbaalenii PYR-1 4644550 YP_956215.1 CDS Mvan_5439 NC_008726.1 5816279 5817328 D PFAM: Anion-transporting ATPase; KEGG: mmc:Mmcs_4822 anion-transporting ATPase; anion-transporting ATPase 5816279..5817328 Mycobacterium vanbaalenii PYR-1 4644551 YP_956216.1 CDS Mvan_5440 NC_008726.1 5817325 5818473 D PFAM: Anion-transporting ATPase; KEGG: mmc:Mmcs_4823 anion-transporting ATPase; anion-transporting ATPase 5817325..5818473 Mycobacterium vanbaalenii PYR-1 4644552 YP_956217.1 CDS Mvan_5441 NC_008726.1 5818483 5818839 R PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_4824 transcription factor WhiB; transcription factor WhiB complement(5818483..5818839) Mycobacterium vanbaalenii PYR-1 4644553 YP_956218.1 CDS Mvan_5442 NC_008726.1 5819204 5821657 D PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; PASTA domain containing protein; KEGG: mmc:Mmcs_4825 glycosyl transferase, family 51; glycosyl transferase family protein 5819204..5821657 Mycobacterium vanbaalenii PYR-1 4644554 YP_956219.1 CDS Mvan_5443 NC_008726.1 5821705 5822679 D PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_4826 metallophosphoesterase; metallophosphoesterase 5821705..5822679 Mycobacterium vanbaalenii PYR-1 4644555 YP_956220.1 CDS Mvan_5444 NC_008726.1 5822676 5823767 D PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mmc:Mmcs_4827 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta 5822676..5823767 Mycobacterium vanbaalenii PYR-1 4644556 YP_956221.1 CDS Mvan_5445 NC_008726.1 5824202 5825860 D PFAM: methyltransferase small; KEGG: mpa:MAP3376 modification methylase; methyltransferase small 5824202..5825860 Mycobacterium vanbaalenii PYR-1 4644558 YP_956222.1 CDS Mvan_5446 NC_008726.1 5825850 5826845 D hypothetical protein 5825850..5826845 Mycobacterium vanbaalenii PYR-1 4644559 YP_956223.1 CDS Mvan_5447 NC_008726.1 5826870 5827787 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: lxx:Lxx01530 hypothetical protein; PA-phosphatase-like phosphoesterase 5826870..5827787 Mycobacterium vanbaalenii PYR-1 4644560 YP_956224.1 CDS Mvan_5448 NC_008726.1 5827923 5828909 R PFAM: luciferase family protein; KEGG: mmc:Mmcs_4855 luciferase-like protein; luciferase family protein complement(5827923..5828909) Mycobacterium vanbaalenii PYR-1 4644561 YP_956225.1 CDS Mvan_5449 NC_008726.1 5828985 5831774 D PFAM: regulatory protein, LuxR; KEGG: sco:SCO0132 probable transcriptional regulator; regulatory protein LuxR 5828985..5831774 Mycobacterium vanbaalenii PYR-1 4644562 YP_956226.1 CDS Mvan_5450 NC_008726.1 5831852 5832922 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ape:APE2239 alcohol dehydrogenase; alcohol dehydrogenase 5831852..5832922 Mycobacterium vanbaalenii PYR-1 4644563 YP_956227.1 CDS Mvan_5451 NC_008726.1 5832933 5833430 D KEGG: ret:RHE_CH02036 hypothetical protein; hypothetical protein 5832933..5833430 Mycobacterium vanbaalenii PYR-1 4644564 YP_956228.1 CDS Mvan_5452 NC_008726.1 5833497 5834651 D KEGG: mmc:Mmcs_4857 putative conserved transmembrane protein; putative transmembrane protein 5833497..5834651 Mycobacterium vanbaalenii PYR-1 4644565 YP_956229.1 CDS Mvan_5453 NC_008726.1 5834653 5835303 D KEGG: mmc:Mmcs_4858 hypothetical protein; hypothetical protein 5834653..5835303 Mycobacterium vanbaalenii PYR-1 4644566 YP_956230.1 CDS Mvan_5454 NC_008726.1 5835300 5836439 D KEGG: mmc:Mmcs_4859 hypothetical protein; hypothetical protein 5835300..5836439 Mycobacterium vanbaalenii PYR-1 4644567 YP_956231.1 CDS Mvan_5455 NC_008726.1 5836436 5837398 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_4860 ATPase associated with various cellular activities, AAA_3; ATPase 5836436..5837398 Mycobacterium vanbaalenii PYR-1 4645194 YP_956232.1 CDS Mvan_5456 NC_008726.1 5837410 5838735 D PFAM: protein of unknown function DUF58; KEGG: mmc:Mmcs_4861 protein of unknown function DUF58; hypothetical protein 5837410..5838735 Mycobacterium vanbaalenii PYR-1 4645195 YP_956233.1 CDS Mvan_5457 NC_008726.1 5838903 5839808 D KEGG: mtc:MT2308 hypothetical protein; hypothetical protein 5838903..5839808 Mycobacterium vanbaalenii PYR-1 4645196 YP_956234.1 CDS Mvan_5458 NC_008726.1 5839851 5840843 R KEGG: mmc:Mmcs_4862 hypothetical protein; hypothetical protein complement(5839851..5840843) Mycobacterium vanbaalenii PYR-1 4645197 YP_956235.1 CDS Mvan_5459 NC_008726.1 5840872 5841753 D PFAM: RDD domain containing protein; KEGG: mmc:Mmcs_4863 RDD domain containing protein; RDD domain-containing protein 5840872..5841753 Mycobacterium vanbaalenii PYR-1 4645198 YP_956236.1 CDS Mvan_5460 NC_008726.1 5841757 5843136 R PFAM: Carotenoid oxygenase; KEGG: mmc:Mmcs_4867 carotenoid oxygenase; carotenoid oxygenase complement(5841757..5843136) Mycobacterium vanbaalenii PYR-1 4645199 YP_956237.1 CDS Mvan_5461 NC_008726.1 5843236 5843763 D PFAM: transcriptional regulator PadR family protein; KEGG: mmc:Mmcs_4870 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 5843236..5843763 Mycobacterium vanbaalenii PYR-1 4645200 YP_956238.1 CDS Mvan_5462 NC_008726.1 5843857 5844606 D PFAM: transcriptional regulator PadR family protein; KEGG: mpa:MAP0354c hypothetical protein; PadR-like family transcriptional regulator 5843857..5844606 Mycobacterium vanbaalenii PYR-1 4645201 YP_956239.1 CDS Mvan_5463 NC_008726.1 5844678 5845556 D PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_4872 aldo/keto reductase; aldo/keto reductase 5844678..5845556 Mycobacterium vanbaalenii PYR-1 4645202 YP_956240.1 CDS Mvan_5464 NC_008726.1 5845713 5847335 D TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; KEGG: mmc:Mmcs_1494 peptide chain release factor 3; peptide chain release factor 3 5845713..5847335 Mycobacterium vanbaalenii PYR-1 4645203 YP_956241.1 CDS Mvan_5465 NC_008726.1 5847378 5848235 R SMART: helix-turn-helix domain protein; KEGG: sco:SCO4944 DNA-binding protein; XRE family transcriptional regulator complement(5847378..5848235) Mycobacterium vanbaalenii PYR-1 4645204 YP_956242.1 CDS Mvan_5466 NC_008726.1 5848389 5849240 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: ade:Adeh_3206 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5848389..5849240 Mycobacterium vanbaalenii PYR-1 4645205 YP_956243.1 CDS glpK NC_008726.1 5849290 5850807 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(5849290..5850807) Mycobacterium vanbaalenii PYR-1 4645206 YP_956244.1 CDS Mvan_5468 NC_008726.1 5850900 5851274 D hypothetical protein 5850900..5851274 Mycobacterium vanbaalenii PYR-1 4645207 YP_956245.1 CDS Mvan_5469 NC_008726.1 5851326 5852060 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4874 methyltransferase type 12; type 11 methyltransferase 5851326..5852060 Mycobacterium vanbaalenii PYR-1 4645208 YP_956246.1 CDS Mvan_5470 NC_008726.1 5852071 5853561 D KEGG: mmc:Mmcs_4876 hypothetical protein; hypothetical protein 5852071..5853561 Mycobacterium vanbaalenii PYR-1 4645209 YP_956247.1 CDS Mvan_5471 NC_008726.1 5853588 5854271 D PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP0301 hypothetical protein; type 11 methyltransferase 5853588..5854271 Mycobacterium vanbaalenii PYR-1 4645210 YP_956248.1 CDS Mvan_5473 NC_008726.1 5855501 5856382 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro06069 hypothetical protein; type 11 methyltransferase 5855501..5856382 Mycobacterium vanbaalenii PYR-1 4645212 YP_956249.1 CDS Mvan_5474 NC_008726.1 5856379 5857017 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: nfa:nfa22370 putative two-component system response regulator; two component LuxR family transcriptional regulator complement(5856379..5857017) Mycobacterium vanbaalenii PYR-1 4645213 YP_956250.1 CDS Mvan_5475 NC_008726.1 5857014 5858357 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: nfa:nfa22360 putative two-component system sensor kinase; histidine kinase complement(5857014..5858357) Mycobacterium vanbaalenii PYR-1 4645214 YP_956251.1 CDS Mvan_5476 NC_008726.1 5858392 5859600 R PFAM: iron-containing alcohol dehydrogenase; KEGG: rha:RHA1_ro06060 1,3-propanediol dehydrogenase; iron-containing alcohol dehydrogenase complement(5858392..5859600) Mycobacterium vanbaalenii PYR-1 4645215 YP_956252.1 CDS Mvan_5477 NC_008726.1 5859698 5861221 R PFAM: VWA containing CoxE family protein; KEGG: nfa:nfa22260 hypothetical protein; VWA containing CoxE family protein complement(5859698..5861221) Mycobacterium vanbaalenii PYR-1 4645216 YP_956253.1 CDS Mvan_5478 NC_008726.1 5861225 5862358 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: nfa:nfa22250 hypothetical protein; ATPase complement(5861225..5862358) Mycobacterium vanbaalenii PYR-1 4645217 YP_956254.1 CDS Mvan_5479 NC_008726.1 5862358 5863650 R PFAM: iron-containing alcohol dehydrogenase; KEGG: nfa:nfa22240 putative alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(5862358..5863650) Mycobacterium vanbaalenii PYR-1 4645218 YP_956255.1 CDS Mvan_5480 NC_008726.1 5863910 5864509 D PFAM: regulatory protein, TetR; KEGG: nfa:nfa50670 putative transcriptional regulator; TetR family transcriptional regulator 5863910..5864509 Mycobacterium vanbaalenii PYR-1 4645219 YP_956256.1 CDS Mvan_5481 NC_008726.1 5864525 5865754 D PFAM: cytochrome P450; KEGG: mpa:MAP2584 hypothetical protein; cytochrome P450 5864525..5865754 Mycobacterium vanbaalenii PYR-1 4648569 YP_956257.1 CDS Mvan_5482 NC_008726.1 5865744 5866823 R PFAM: aminotransferase, class V; KEGG: mmc:Mmcs_4878 aminotransferase, class V; class V aminotransferase complement(5865744..5866823) Mycobacterium vanbaalenii PYR-1 4648570 YP_956258.1 CDS Mvan_5483 NC_008726.1 5866820 5867785 R KEGG: mmc:Mmcs_4879 hypothetical protein; hypothetical protein complement(5866820..5867785) Mycobacterium vanbaalenii PYR-1 4648571 YP_956259.1 CDS Mvan_5484 NC_008726.1 5867785 5868480 R KEGG: mmc:Mmcs_4880 hypothetical protein; hypothetical protein complement(5867785..5868480) Mycobacterium vanbaalenii PYR-1 4648572 YP_956260.1 CDS Mvan_5485 NC_008726.1 5868467 5869813 R PFAM: protein of unknown function DUF323; KEGG: mmc:Mmcs_4881 protein of unknown function DUF323; hypothetical protein complement(5868467..5869813) Mycobacterium vanbaalenii PYR-1 4648573 YP_956261.1 CDS Mvan_5486 NC_008726.1 5869810 5871084 R PFAM: glutamate--cysteine ligase, GCS2; KEGG: mmc:Mmcs_4882 glutamate--cysteine ligase, GCS2; glutamate--cysteine ligase complement(5869810..5871084) Mycobacterium vanbaalenii PYR-1 4648574 YP_956262.1 CDS Mvan_5487 NC_008726.1 5871197 5871892 R KEGG: mmc:Mmcs_4883 hypothetical protein; hypothetical protein complement(5871197..5871892) Mycobacterium vanbaalenii PYR-1 4648575 YP_956263.1 CDS Mvan_5488 NC_008726.1 5871901 5873022 R PFAM: cobalamin synthesis CobW domain protein; KEGG: mbo:Mb0109 hypothetical protein; cobalamin synthesis protein CobW complement(5871901..5873022) Mycobacterium vanbaalenii PYR-1 4648576 YP_956264.1 CDS rpmB NC_008726.1 5873125 5873361 D required for 70S ribosome assembly; 50S ribosomal protein L28 5873125..5873361 Mycobacterium vanbaalenii PYR-1 4648577 YP_956265.1 CDS rpmG NC_008726.1 5873361 5873525 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 5873361..5873525 Mycobacterium vanbaalenii PYR-1 4648578 YP_956266.1 CDS rpsN NC_008726.1 5873525 5873830 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 5873525..5873830 Mycobacterium vanbaalenii PYR-1 4648579 YP_956267.1 CDS Mvan_5492 NC_008726.1 5873827 5874078 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 5873827..5874078 Mycobacterium vanbaalenii PYR-1 4648580 YP_956268.1 CDS Mvan_5493 NC_008726.1 5874075 5875523 R PFAM: Catalase domain protein; KEGG: csa:Csal_0803 catalase; catalase complement(5874075..5875523) Mycobacterium vanbaalenii PYR-1 4648581 YP_956269.1 CDS Mvan_5494 NC_008726.1 5875617 5876027 R KEGG: mmc:Mmcs_4886 hypothetical protein; hypothetical protein complement(5875617..5876027) Mycobacterium vanbaalenii PYR-1 4648582 YP_956270.1 CDS Mvan_5496 NC_008726.1 5876459 5877520 D PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase; transposase, mutator type 5876459..5877520 Mycobacterium vanbaalenii PYR-1 4648584 YP_956271.1 CDS Mvan_5497 NC_008726.1 5877588 5878637 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sha:SH1662 hypothetical protein; phage integrase family protein 5877588..5878637 Mycobacterium vanbaalenii PYR-1 4648585 YP_956272.1 CDS Mvan_5498 NC_008726.1 5878634 5880577 D PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein 5878634..5880577 Mycobacterium vanbaalenii PYR-1 4648586 YP_956273.1 CDS Mvan_5500 NC_008726.1 5880841 5881149 R KEGG: mmc:Mmcs_1054 transcriptional regulator, MarR family; hypothetical protein complement(5880841..5881149) Mycobacterium vanbaalenii PYR-1 4648588 YP_956274.1 CDS Mvan_5502 NC_008726.1 5882989 5884041 R KEGG: mmc:Mmcs_4887 hypothetical protein; hypothetical protein complement(5882989..5884041) Mycobacterium vanbaalenii PYR-1 4648590 YP_956275.1 CDS Mvan_5503 NC_008726.1 5884110 5885144 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(5884110..5885144) Mycobacterium vanbaalenii PYR-1 4648591 YP_956276.1 CDS Mvan_5504 NC_008726.1 5885147 5886412 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(5885147..5886412) Mycobacterium vanbaalenii PYR-1 4648592 YP_956277.1 CDS Mvan_5505 NC_008726.1 5886499 5887083 D PFAM: nitroreductase; KEGG: mmc:Mmcs_4890 nitroreductase; nitroreductase 5886499..5887083 Mycobacterium vanbaalenii PYR-1 4648593 YP_956278.1 CDS Mvan_5506 NC_008726.1 5887101 5887424 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_3525 transcriptional regulator, ArsR family; regulatory protein ArsR 5887101..5887424 Mycobacterium vanbaalenii PYR-1 4648643 YP_956279.1 CDS Mvan_5507 NC_008726.1 5887421 5887885 D KEGG: mmc:Mmcs_3524 hypothetical protein; hypothetical protein 5887421..5887885 Mycobacterium vanbaalenii PYR-1 4648644 YP_956280.1 CDS Mvan_5508 NC_008726.1 5888120 5889373 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mmc:Mmcs_4891 ammonium transporter; ammonium transporter 5888120..5889373 Mycobacterium vanbaalenii PYR-1 4648645 YP_956281.1 CDS Mvan_5509 NC_008726.1 5889482 5890789 D PFAM: glutamine synthetase, catalytic region; KEGG: mmc:Mmcs_4892 glutamate--ammonia ligase; glutamate--ammonia ligase 5889482..5890789 Mycobacterium vanbaalenii PYR-1 4648646 YP_956282.1 CDS Mvan_5510 NC_008726.1 5890826 5891734 D PFAM: glutamine amidotransferase, class-II; KEGG: mmc:Mmcs_4893 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II 5890826..5891734 Mycobacterium vanbaalenii PYR-1 4648647 YP_956283.1 CDS Mvan_5511 NC_008726.1 5891722 5892408 D PFAM: glutamate synthase, alpha subunit domain protein; KEGG: mmc:Mmcs_4894 hypothetical protein; glutamate synthase subunit alpha 5891722..5892408 Mycobacterium vanbaalenii PYR-1 4648648 YP_956284.1 CDS Mvan_5512 NC_008726.1 5892408 5893751 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: mmc:Mmcs_4895 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 5892408..5893751 Mycobacterium vanbaalenii PYR-1 4648649 YP_956285.1 CDS Mvan_5513 NC_008726.1 5893748 5894944 D PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_4896 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5893748..5894944 Mycobacterium vanbaalenii PYR-1 4648650 YP_956286.1 CDS Mvan_5514 NC_008726.1 5894954 5895622 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: mmc:Mmcs_4897 transcriptional regulator, XRE family; XRE family transcriptional regulator 5894954..5895622 Mycobacterium vanbaalenii PYR-1 4648651 YP_956287.1 CDS Mvan_5515 NC_008726.1 5895794 5897632 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: mmc:Mmcs_4898 2-isopropylmalate synthase; 2-isopropylmalate synthase 5895794..5897632 Mycobacterium vanbaalenii PYR-1 4648652 YP_956288.1 CDS Mvan_5516 NC_008726.1 5897629 5898642 R PFAM: Choloylglycine hydrolase; KEGG: rpa:RPA1879 choloylglycine hydrolase; choloylglycine hydrolase complement(5897629..5898642) Mycobacterium vanbaalenii PYR-1 4648653 YP_956289.1 CDS Mvan_5517 NC_008726.1 5898635 5899321 R PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: noc:Noc_2926 UbiE/COQ5 methyltransferase; type 11 methyltransferase complement(5898635..5899321) Mycobacterium vanbaalenii PYR-1 4648654 YP_956290.1 CDS Mvan_5518 NC_008726.1 5899377 5900231 D PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mxa:MXAN_0445 transcriptional regulator, AraC family; response regulator receiver protein 5899377..5900231 Mycobacterium vanbaalenii PYR-1 4648655 YP_956291.1 CDS Mvan_5519 NC_008726.1 5900240 5901241 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(5900240..5901241) Mycobacterium vanbaalenii PYR-1 4648656 YP_956292.1 CDS Mvan_5520 NC_008726.1 5901269 5902546 D PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: mmc:Mmcs_4901 domain of unknown function DUF1727; hypothetical protein 5901269..5902546 Mycobacterium vanbaalenii PYR-1 4648657 YP_956293.1 CDS Mvan_5521 NC_008726.1 5902539 5903255 D PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: mmc:Mmcs_4902 CobB/CobQ-like glutamine amidotransferase; glutamine amidotransferase 5902539..5903255 Mycobacterium vanbaalenii PYR-1 4648658 YP_956294.1 CDS Mvan_5522 NC_008726.1 5903256 5903915 R PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mpa:MAP4317c hypothetical protein; two component LuxR family transcriptional regulator complement(5903256..5903915) Mycobacterium vanbaalenii PYR-1 4648659 YP_956295.1 CDS Mvan_5523 NC_008726.1 5903912 5905072 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mpa:MAP4318c hypothetical protein; integral membrane sensor signal transduction histidine kinase complement(5903912..5905072) Mycobacterium vanbaalenii PYR-1 4648660 YP_956296.1 CDS Mvan_5524 NC_008726.1 5905260 5905640 D KEGG: mpa:MAP4319 hypothetical protein; hypothetical protein 5905260..5905640 Mycobacterium vanbaalenii PYR-1 4648661 YP_956297.1 CDS Mvan_5525 NC_008726.1 5905637 5906944 D PFAM: cytochrome P450; KEGG: mpa:MAP2033 hypothetical protein; cytochrome P450 5905637..5906944 Mycobacterium vanbaalenii PYR-1 4648662 YP_956298.1 CDS Mvan_5526 NC_008726.1 5906925 5907821 R KEGG: mbo:Mb3741c hypothetical protein; hypothetical protein complement(5906925..5907821) Mycobacterium vanbaalenii PYR-1 4648663 YP_956299.1 CDS recR NC_008726.1 5907970 5908581 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(5907970..5908581) Mycobacterium vanbaalenii PYR-1 4648664 YP_956300.1 CDS Mvan_5528 NC_008726.1 5908586 5908918 R PFAM: conserved hypothetical protein 103; KEGG: mmc:Mmcs_4904 conserved hypothetical protein 103; hypothetical protein complement(5908586..5908918) Mycobacterium vanbaalenii PYR-1 4648665 YP_956301.1 CDS Mvan_5529 NC_008726.1 5909048 5909788 D PFAM: cell wall hydrolase/autolysin; KEGG: mmc:Mmcs_4905 cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 5909048..5909788 Mycobacterium vanbaalenii PYR-1 4648666 YP_956302.1 CDS Mvan_5530 NC_008726.1 5909785 5910249 R KEGG: mmc:Mmcs_4906 hypothetical protein; hypothetical protein complement(5909785..5910249) Mycobacterium vanbaalenii PYR-1 4648667 YP_956303.1 CDS Mvan_5531 NC_008726.1 5910331 5911722 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_4907 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 5910331..5911722 Mycobacterium vanbaalenii PYR-1 4648668 YP_956304.1 CDS Mvan_5532 NC_008726.1 5911751 5913073 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4908 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 5911751..5913073 Mycobacterium vanbaalenii PYR-1 4645969 YP_956305.1 CDS Mvan_5533 NC_008726.1 5913090 5913470 D KEGG: sil:SPO3345 hypothetical protein; hypothetical protein 5913090..5913470 Mycobacterium vanbaalenii PYR-1 4645970 YP_956306.1 CDS Mvan_5534 NC_008726.1 5913490 5915421 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(5913490..5915421) Mycobacterium vanbaalenii PYR-1 4645971 YP_956307.1 CDS Mvan_5535 NC_008726.1 5915448 5916749 R PFAM: aminotransferase, class I and II; KEGG: mmc:Mmcs_4910 aminotransferase, class I and II; GntR family transcriptional regulator complement(5915448..5916749) Mycobacterium vanbaalenii PYR-1 4645972 YP_956308.1 CDS Mvan_5536 NC_008726.1 5917124 5917882 D KEGG: mmc:Mmcs_4911 hypothetical protein; hypothetical protein 5917124..5917882 Mycobacterium vanbaalenii PYR-1 4645975 YP_956309.1 CDS Mvan_5537 NC_008726.1 5917941 5918948 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mmc:Mmcs_4912 peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain-containing protein 5917941..5918948 Mycobacterium vanbaalenii PYR-1 4645976 YP_956310.1 CDS Mvan_5538 NC_008726.1 5918999 5920069 D PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4914 dihydrodipicolinate reductase; dihydrodipicolinate reductase 5918999..5920069 Mycobacterium vanbaalenii PYR-1 4645977 YP_956311.1 CDS Mvan_5539 NC_008726.1 5920079 5920957 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: sma:SAV5882 integral membrane protein; hypothetical protein 5920079..5920957 Mycobacterium vanbaalenii PYR-1 4645978 YP_956312.1 CDS Mvan_5540 NC_008726.1 5920966 5921715 R PFAM: Thioesterase; KEGG: fal:FRAAL3859 thioesterase involved in non-ribosomal peptide biosynthesis; thioesterase complement(5920966..5921715) Mycobacterium vanbaalenii PYR-1 4645979 YP_956313.1 CDS Mvan_5541 NC_008726.1 5921712 5922245 R KEGG: cne:CNE03390 hypothetical protein; hypothetical protein complement(5921712..5922245) Mycobacterium vanbaalenii PYR-1 4645980 YP_956314.1 CDS Mvan_5542 NC_008726.1 5922269 5923318 R KEGG: mmc:Mmcs_4915 hypothetical protein; hypothetical protein complement(5922269..5923318) Mycobacterium vanbaalenii PYR-1 4645981 YP_956315.1 CDS ligC NC_008726.1 5923320 5924399 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase complement(5923320..5924399) Mycobacterium vanbaalenii PYR-1 4645982 YP_956316.1 CDS Mvan_5544 NC_008726.1 5924702 5925718 D KEGG: sma:SAV6581 hypothetical protein; hypothetical protein 5924702..5925718 Mycobacterium vanbaalenii PYR-1 4645983 YP_956317.1 CDS Mvan_5545 NC_008726.1 5925784 5926545 R TIGRFAM: conserved hypothetical integral membrane protein; KEGG: mmc:Mmcs_3426 hypothetical protein; hypothetical protein complement(5925784..5926545) Mycobacterium vanbaalenii PYR-1 4645984 YP_956318.1 CDS Mvan_5546 NC_008726.1 5926620 5928335 R PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4917 protein of unknown function DUF222; hypothetical protein complement(5926620..5928335) Mycobacterium vanbaalenii PYR-1 4645985 YP_956319.1 CDS Mvan_5547 NC_008726.1 5928524 5929249 D PFAM: nitroreductase; KEGG: mmc:Mmcs_4933 nitroreductase; nitroreductase 5928524..5929249 Mycobacterium vanbaalenii PYR-1 4645986 YP_956320.1 CDS Mvan_5548 NC_008726.1 5929328 5929792 D hypothetical protein 5929328..5929792 Mycobacterium vanbaalenii PYR-1 4645987 YP_956321.1 CDS ligC NC_008726.1 5929804 5930886 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 5929804..5930886 Mycobacterium vanbaalenii PYR-1 4645988 YP_956322.1 CDS Mvan_5550 NC_008726.1 5930962 5932410 D PFAM: transposase, IS4 family protein; KEGG: mmc:Mmcs_5428 TnpC protein; transposase, IS4 family protein 5930962..5932410 Mycobacterium vanbaalenii PYR-1 4645989 YP_956323.1 CDS Mvan_5552 NC_008726.1 5933488 5934201 R PFAM: protein of unknown function DUF125, transmembrane; KEGG: mpa:MAP2073c hypothetical protein; hypothetical protein complement(5933488..5934201) Mycobacterium vanbaalenii PYR-1 4645991 YP_956324.1 CDS Mvan_5553 NC_008726.1 5934365 5935012 D KEGG: mmc:Mmcs_2708 hypothetical protein; hypothetical protein 5934365..5935012 Mycobacterium vanbaalenii PYR-1 4645992 YP_956325.1 CDS Mvan_5554 NC_008726.1 5935054 5935536 D KEGG: sco:SCO5992 integral membrane protein; hypothetical protein 5935054..5935536 Mycobacterium vanbaalenii PYR-1 4647123 YP_956326.1 CDS Mvan_5555 NC_008726.1 5935519 5936445 R PFAM: peptidase M48, Ste24p; peptidase M56, BlaR1; KEGG: mmc:Mmcs_1442 hypothetical protein; peptidase M56, BlaR1 complement(5935519..5936445) Mycobacterium vanbaalenii PYR-1 4647124 YP_956327.1 CDS Mvan_5556 NC_008726.1 5936442 5936816 R PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_1441 transcriptional repressor, CopY family; CopY family transcriptional regulator complement(5936442..5936816) Mycobacterium vanbaalenii PYR-1 4647125 YP_956328.1 CDS Mvan_5557 NC_008726.1 5936878 5937738 R PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: sco:SCO5994 integral membrane cytochrome biogenesis protein; cytochrome c biogenesis transmembrane protein complement(5936878..5937738) Mycobacterium vanbaalenii PYR-1 4647126 YP_956329.1 CDS Mvan_5558 NC_008726.1 5937735 5938481 R PFAM: DSBA oxidoreductase; KEGG: sco:SCO5993 hypothetical protein; DSBA oxidoreductase complement(5937735..5938481) Mycobacterium vanbaalenii PYR-1 4647127 YP_956330.1 CDS Mvan_5559 NC_008726.1 5938558 5939808 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_2281 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(5938558..5939808) Mycobacterium vanbaalenii PYR-1 4647128 YP_956331.1 CDS Mvan_5560 NC_008726.1 5939962 5940972 D PFAM: putative esterase; KEGG: mmc:Mmcs_5015 putative esterase; putative esterase 5939962..5940972 Mycobacterium vanbaalenii PYR-1 4647129 YP_956332.1 CDS Mvan_5561 NC_008726.1 5940942 5942693 R KEGG: mmc:Mmcs_4952 hypothetical protein; hypothetical protein complement(5940942..5942693) Mycobacterium vanbaalenii PYR-1 4647130 YP_956333.1 CDS Mvan_5562 NC_008726.1 5942690 5943049 R KEGG: mmc:Mmcs_4953 propanediol utilization: dehydratase, small subunit; propanediol utilization dehydratase, small subunit complement(5942690..5943049) Mycobacterium vanbaalenii PYR-1 4647131 YP_956334.1 CDS Mvan_5563 NC_008726.1 5943040 5945280 R PFAM: dehydratase, large subunit; dehydratase, medium subunit; KEGG: mmc:Mmcs_4954 glycerol dehydratase; glycerol dehydratase complement(5943040..5945280) Mycobacterium vanbaalenii PYR-1 4647132 YP_956335.1 CDS Mvan_5564 NC_008726.1 5945292 5946824 R PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_0199 amino acid permease-associated region; amino acid permease-associated protein complement(5945292..5946824) Mycobacterium vanbaalenii PYR-1 4647133 YP_956336.1 CDS Mvan_5565 NC_008726.1 5947032 5948312 D PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0198 aminotransferase class-III; class III aminotransferase 5947032..5948312 Mycobacterium vanbaalenii PYR-1 4647134 YP_956337.1 CDS Mvan_5566 NC_008726.1 5948309 5949871 D PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0197 aldehyde dehydrogenase; aldehyde dehydrogenase 5948309..5949871 Mycobacterium vanbaalenii PYR-1 4647135 YP_956338.1 CDS Mvan_5567 NC_008726.1 5949875 5950480 D PFAM: microcompartments protein; KEGG: mmc:Mmcs_0196 microcompartments protein; microcompartments protein 5949875..5950480 Mycobacterium vanbaalenii PYR-1 4647136 YP_956339.1 CDS Mvan_5568 NC_008726.1 5950477 5950971 D KEGG: mmc:Mmcs_0195 hypothetical protein; hypothetical protein 5950477..5950971 Mycobacterium vanbaalenii PYR-1 4647137 YP_956340.1 CDS Mvan_5569 NC_008726.1 5950968 5951213 D KEGG: mmc:Mmcs_0194 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein CcmL 5950968..5951213 Mycobacterium vanbaalenii PYR-1 4647138 YP_956341.1 CDS Mvan_5570 NC_008726.1 5951269 5951550 D PFAM: microcompartments protein; KEGG: mmc:Mmcs_0193 microcompartments protein; microcompartments protein 5951269..5951550 Mycobacterium vanbaalenii PYR-1 4647139 YP_956342.1 CDS Mvan_5571 NC_008726.1 5951561 5952238 D KEGG: mmc:Mmcs_0192 hypothetical protein; hypothetical protein 5951561..5952238 Mycobacterium vanbaalenii PYR-1 4647140 YP_956343.1 CDS Mvan_5572 NC_008726.1 5952235 5953230 D PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_0191 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 5952235..5953230 Mycobacterium vanbaalenii PYR-1 4647141 YP_956344.1 CDS Mvan_5573 NC_008726.1 5953256 5954035 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0190 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 5953256..5954035 Mycobacterium vanbaalenii PYR-1 4647142 YP_956345.1 CDS Mvan_5574 NC_008726.1 5954087 5954854 D PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; UbiC transcription regulator-associated domain protein; KEGG: mmc:Mmcs_0189 transcriptional regulator, GntR family; UbiC transcription regulator-associated domain-containing protein 5954087..5954854 Mycobacterium vanbaalenii PYR-1 4647143 YP_956346.1 CDS Mvan_5575 NC_008726.1 5954895 5955827 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 5954895..5955827 Mycobacterium vanbaalenii PYR-1 4647144 YP_956347.1 CDS Mvan_5576 NC_008726.1 5955824 5957335 D KEGG: mmc:Mmcs_4942 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; polar amino acid ABC transporter inner membrane subunit 5955824..5957335 Mycobacterium vanbaalenii PYR-1 4647145 YP_956348.1 CDS Mvan_5577 NC_008726.1 5957332 5958099 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4943 ABC transporter related; ABC transporter--like protein 5957332..5958099 Mycobacterium vanbaalenii PYR-1 4647146 YP_956349.1 CDS Mvan_5578 NC_008726.1 5958116 5959486 D PFAM: amine oxidase; KEGG: nfa:nfa30780 putative oxidoreductase; amine oxidase 5958116..5959486 Mycobacterium vanbaalenii PYR-1 4647147 YP_956350.1 CDS Mvan_5579 NC_008726.1 5959490 5960749 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_4947 cytochrome P450; cytochrome P450 complement(5959490..5960749) Mycobacterium vanbaalenii PYR-1 4646122 YP_956351.1 CDS Mvan_5580 NC_008726.1 5960803 5962008 R KEGG: mmc:Mmcs_4948 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(5960803..5962008) Mycobacterium vanbaalenii PYR-1 4646123 YP_956352.1 CDS Mvan_5581 NC_008726.1 5962062 5962526 D KEGG: mmc:Mmcs_2726 hypothetical protein; hypothetical protein 5962062..5962526 Mycobacterium vanbaalenii PYR-1 4646124 YP_956353.1 CDS Mvan_5582 NC_008726.1 5962708 5963166 D PFAM: Mycobacterium 19 kDa lipoprotein antigen family protein; KEGG: mmc:Mmcs_4950 Mycobacterium 19 kDa lipoprotein antigen; hypothetical protein 5962708..5963166 Mycobacterium vanbaalenii PYR-1 4646125 YP_956354.1 CDS Mvan_5583 NC_008726.1 5963168 5963512 R KEGG: mmc:Mmcs_1707 protein of unknown function DUF732; hypothetical protein complement(5963168..5963512) Mycobacterium vanbaalenii PYR-1 4646126 YP_956355.1 CDS Mvan_5584 NC_008726.1 5963603 5963974 D KEGG: mmc:Mmcs_4956 putative secreted protein; hypothetical protein 5963603..5963974 Mycobacterium vanbaalenii PYR-1 4646127 YP_956356.1 CDS Mvan_5585 NC_008726.1 5963965 5964990 R KEGG: mmc:Mmcs_3713 dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(5963965..5964990) Mycobacterium vanbaalenii PYR-1 4646128 YP_956357.1 CDS Mvan_5586 NC_008726.1 5965062 5965979 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mpa:MAP1654c hypothetical protein; 2-nitropropane dioxygenase 5965062..5965979 Mycobacterium vanbaalenii PYR-1 4646129 YP_956358.1 CDS Mvan_5587 NC_008726.1 5966010 5966351 D KEGG: mpa:MAP3543 hypothetical protein; hypothetical protein 5966010..5966351 Mycobacterium vanbaalenii PYR-1 4646130 YP_956359.1 CDS Mvan_5588 NC_008726.1 5966367 5967125 R PFAM: regulatory protein, DeoR; KEGG: sma:SAV6358 DeoR-family transcriptional regulator; DeoR family transcriptional regulator complement(5966367..5967125) Mycobacterium vanbaalenii PYR-1 4646131 YP_956360.1 CDS Mvan_5589 NC_008726.1 5967136 5969112 R TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA0087 PTS system, mannitol-specific IIabc component; PTS system mannitol-specific transporter subunit IIC complement(5967136..5969112) Mycobacterium vanbaalenii PYR-1 4646132 YP_956361.1 CDS Mvan_5590 NC_008726.1 5969303 5970367 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918 putative zinc-binding sorbitol dehydrogenase; alcohol dehydrogenase 5969303..5970367 Mycobacterium vanbaalenii PYR-1 4646133 YP_956362.1 CDS Mvan_5591 NC_008726.1 5970419 5971723 R PFAM: acetyl-CoA hydrolase/transferase; KEGG: pgi:PG0690 4-hydroxybutyrate CoA-transferase; acetyl-CoA hydrolase/transferase complement(5970419..5971723) Mycobacterium vanbaalenii PYR-1 4646134 YP_956363.1 CDS Mvan_5592 NC_008726.1 5971880 5972209 D KEGG: mmc:Mmcs_1830 hypothetical protein; hypothetical protein 5971880..5972209 Mycobacterium vanbaalenii PYR-1 4646135 YP_956364.1 CDS Mvan_5593 NC_008726.1 5972279 5973625 D KEGG: psp:PSPPH_1229 sensory box-containing diguanylate cyclase, putative; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 5972279..5973625 Mycobacterium vanbaalenii PYR-1 4646136 YP_956365.1 CDS Mvan_5594 NC_008726.1 5973924 5974424 R PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mmc:Mmcs_4960 CMP/dCMP deaminase, zinc-binding protein; CMP/dCMP deaminase complement(5973924..5974424) Mycobacterium vanbaalenii PYR-1 4646138 YP_956366.1 CDS Mvan_5595 NC_008726.1 5974421 5974945 R KEGG: mpa:MAP0278 hypothetical protein; hypothetical protein complement(5974421..5974945) Mycobacterium vanbaalenii PYR-1 4646139 YP_956367.1 CDS Mvan_5596 NC_008726.1 5975021 5975998 D catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 5975021..5975998 Mycobacterium vanbaalenii PYR-1 4646140 YP_956368.1 CDS Mvan_5597 NC_008726.1 5975961 5976554 R PFAM: protein of unknown function DUF1089; KEGG: mmc:Mmcs_4963 protein of unknown function DUF1089; hypothetical protein complement(5975961..5976554) Mycobacterium vanbaalenii PYR-1 4646141 YP_956369.1 CDS Mvan_5598 NC_008726.1 5976551 5977345 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4964 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5976551..5977345) Mycobacterium vanbaalenii PYR-1 4646142 YP_956370.1 CDS Mvan_5599 NC_008726.1 5977342 5978022 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4965 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(5977342..5978022) Mycobacterium vanbaalenii PYR-1 4646143 YP_956371.1 CDS Mvan_5600 NC_008726.1 5978027 5979139 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4966 ABC transporter related; ABC transporter--like protein complement(5978027..5979139) Mycobacterium vanbaalenii PYR-1 4646144 YP_956372.1 CDS Mvan_5601 NC_008726.1 5979147 5980097 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_4967 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(5979147..5980097) Mycobacterium vanbaalenii PYR-1 4646145 YP_956373.1 CDS Mvan_5602 NC_008726.1 5980266 5980556 D KEGG: mmc:Mmcs_4968 hypothetical protein; hypothetical protein 5980266..5980556 Mycobacterium vanbaalenii PYR-1 4646146 YP_956374.1 CDS Mvan_5603 NC_008726.1 5980561 5981580 R PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_4969 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(5980561..5981580) Mycobacterium vanbaalenii PYR-1 4644035 YP_956375.1 CDS Mvan_5604 NC_008726.1 5981590 5982198 R PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_4970 phosphoglycerate mutase; phosphoglycerate mutase complement(5981590..5982198) Mycobacterium vanbaalenii PYR-1 4644036 YP_956376.1 CDS Mvan_5605 NC_008726.1 5982217 5982993 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4971 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5982217..5982993 Mycobacterium vanbaalenii PYR-1 4644037 YP_956377.1 CDS Mvan_5606 NC_008726.1 5983070 5984995 R PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_4972 beta-lactamase-like protein; beta-lactamase domain-containing protein complement(5983070..5984995) Mycobacterium vanbaalenii PYR-1 4644038 YP_956378.1 CDS Mvan_5607 NC_008726.1 5985045 5985596 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: dar:Daro_1347 hypothetical protein; cupin 5985045..5985596 Mycobacterium vanbaalenii PYR-1 4644039 YP_956379.1 CDS Mvan_5608 NC_008726.1 5985593 5986009 R PFAM: protein of unknown function DUF661; KEGG: mmc:Mmcs_4977 hypothetical protein; hypothetical protein complement(5985593..5986009) Mycobacterium vanbaalenii PYR-1 4644040 YP_956380.1 CDS Mvan_5609 NC_008726.1 5986002 5986508 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_4978 protein of unknown function UPF0025; phosphodiesterase complement(5986002..5986508) Mycobacterium vanbaalenii PYR-1 4644041 YP_956381.1 CDS Mvan_5610 NC_008726.1 5986557 5988311 R PFAM: cytochrome c oxidase, subunit I; KEGG: mmc:Mmcs_3438 cytochrome-c oxidase; cytochrome-c oxidase complement(5986557..5988311) Mycobacterium vanbaalenii PYR-1 4644042 YP_956382.1 CDS Mvan_5611 NC_008726.1 5988731 5989786 D PFAM: aminotransferase, class I and II; KEGG: mmc:Mmcs_4982 histidinol-phosphate aminotransferase; putative aminotransferase 5988731..5989786 Mycobacterium vanbaalenii PYR-1 4644045 YP_956383.1 CDS Mvan_5612 NC_008726.1 5989830 5990285 D KEGG: mmc:Mmcs_4985 hypothetical protein; hypothetical protein 5989830..5990285 Mycobacterium vanbaalenii PYR-1 4644046 YP_956384.1 CDS Mvan_5613 NC_008726.1 5990297 5991121 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5990297..5991121 Mycobacterium vanbaalenii PYR-1 4644047 YP_956385.1 CDS Mvan_5614 NC_008726.1 5991242 5991760 R PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_4987 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(5991242..5991760) Mycobacterium vanbaalenii PYR-1 4644049 YP_956386.1 CDS Mvan_5615 NC_008726.1 5991832 5992809 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_4988 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase 5991832..5992809 Mycobacterium vanbaalenii PYR-1 4644050 YP_956387.1 CDS Mvan_5616 NC_008726.1 5992816 5994012 R TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: mmc:Mmcs_4989 cysteine desulphurase related; cysteine desulfurase complement(5992816..5994012) Mycobacterium vanbaalenii PYR-1 4644051 YP_956388.1 CDS Mvan_5617 NC_008726.1 5994535 5995044 D KEGG: mmc:Mmcs_4990 hypothetical protein; hypothetical protein 5994535..5995044 Mycobacterium vanbaalenii PYR-1 4644052 YP_956389.1 CDS Mvan_5618 NC_008726.1 5995052 5995861 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4991 ABC transporter related; ABC transporter--like protein 5995052..5995861 Mycobacterium vanbaalenii PYR-1 4644053 YP_956390.1 CDS Mvan_5619 NC_008726.1 5995851 5996792 D PFAM: glycosyl transferase, family 2; KEGG: mpa:MAP0240c RfbE; glycosyl transferase family protein 5995851..5996792 Mycobacterium vanbaalenii PYR-1 4644054 YP_956391.1 CDS Mvan_5620 NC_008726.1 5996799 5997629 D PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_4993 ABC-2 type transporter; ABC-2 type transporter 5996799..5997629 Mycobacterium vanbaalenii PYR-1 4644055 YP_956392.1 CDS Mvan_5621 NC_008726.1 5997633 5998088 R KEGG: mpa:MAP3177 hypothetical protein; hypothetical protein complement(5997633..5998088) Mycobacterium vanbaalenii PYR-1 4644056 YP_956393.1 CDS Mvan_5622 NC_008726.1 5998123 5998470 D KEGG: mmc:Mmcs_4995 hypothetical protein; hypothetical protein 5998123..5998470 Mycobacterium vanbaalenii PYR-1 4644057 YP_956394.1 CDS Mvan_5623 NC_008726.1 5998467 5999252 R PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_4996 hypothetical protein; aminoglycoside phosphotransferase complement(5998467..5999252) Mycobacterium vanbaalenii PYR-1 4645018 YP_956395.1 CDS Mvan_5624 NC_008726.1 5999321 5999824 R TIGRFAM: alkylhydroperoxidase-like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_4997 alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(5999321..5999824) Mycobacterium vanbaalenii PYR-1 4645019 YP_956396.1 CDS Mvan_5625 NC_008726.1 5999832 6001235 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: mmc:Mmcs_4998 transcriptional regulator, GntR family; GntR family transcriptional regulator 5999832..6001235 Mycobacterium vanbaalenii PYR-1 4645020 YP_956397.1 CDS Mvan_5626 NC_008726.1 6001313 6001708 D PFAM: GtrA family protein; KEGG: mmc:Mmcs_4999 GtrA-like protein; GtrA family protein 6001313..6001708 Mycobacterium vanbaalenii PYR-1 4645021 YP_956398.1 CDS Mvan_5627 NC_008726.1 6001741 6003132 D PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_5000 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 6001741..6003132 Mycobacterium vanbaalenii PYR-1 4645022 YP_956399.1 CDS Mvan_5628 NC_008726.1 6003133 6003915 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa1960 putative short chain dehydrogenase; short chain dehydrogenase 6003133..6003915 Mycobacterium vanbaalenii PYR-1 4645023 YP_956400.1 CDS Mvan_5629 NC_008726.1 6003948 6005852 D KEGG: mmc:Mmcs_5002 putative conserved transmembrane protein; putative transmembrane protein 6003948..6005852 Mycobacterium vanbaalenii PYR-1 4645024 YP_956401.1 CDS Mvan_5630 NC_008726.1 6005857 6009117 D PFAM: cell wall arabinan synthesis protein; KEGG: mmc:Mmcs_5003 cell wall arabinan synthesis protein; cell wall arabinan synthesis protein 6005857..6009117 Mycobacterium vanbaalenii PYR-1 4645025 YP_956402.1 CDS Mvan_5631 NC_008726.1 6009183 6012434 D PFAM: cell wall arabinan synthesis protein; KEGG: mmc:Mmcs_5004 cell wall arabinan synthesis protein; cell wall arabinan synthesis protein 6009183..6012434 Mycobacterium vanbaalenii PYR-1 4645026 YP_956403.1 CDS Mvan_5632 NC_008726.1 6012431 6015670 D PFAM: cell wall arabinan synthesis protein; KEGG: mmc:Mmcs_5005 cell wall arabinan synthesis protein; cell wall arabinan synthesis protein 6012431..6015670 Mycobacterium vanbaalenii PYR-1 4645027 YP_956404.1 CDS Mvan_5633 NC_008726.1 6015667 6016569 D PFAM: beta-lactamase domain protein; KEGG: sco:SCO6777 beta-lactamase; beta-lactamase domain-containing protein 6015667..6016569 Mycobacterium vanbaalenii PYR-1 4645028 YP_956405.1 CDS Mvan_5634 NC_008726.1 6016626 6017756 D PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ava:Ava_0989 ionotropic glutamate receptor; extracellular solute-binding protein 6016626..6017756 Mycobacterium vanbaalenii PYR-1 4645029 YP_956406.1 CDS Mvan_5635 NC_008726.1 6017760 6019163 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_5007 serine/threonine protein kinase; protein kinase complement(6017760..6019163) Mycobacterium vanbaalenii PYR-1 4645030 YP_956407.1 CDS Mvan_5636 NC_008726.1 6019189 6019632 R PFAM: RDD domain containing protein; RDD domain-containing protein complement(6019189..6019632) Mycobacterium vanbaalenii PYR-1 4645031 YP_956408.1 CDS Mvan_5637 NC_008726.1 6019619 6019999 R hypothetical protein complement(6019619..6019999) Mycobacterium vanbaalenii PYR-1 4645032 YP_956409.1 CDS Mvan_5638 NC_008726.1 6020013 6020930 R hypothetical protein complement(6020013..6020930) Mycobacterium vanbaalenii PYR-1 4645033 YP_956410.1 CDS Mvan_5639 NC_008726.1 6020967 6022517 R PFAM: carboxyl transferase; KEGG: mmc:Mmcs_5009 carboxyl transferase; carboxyl transferase complement(6020967..6022517) Mycobacterium vanbaalenii PYR-1 4645034 YP_956411.1 CDS Mvan_5640 NC_008726.1 6022514 6028036 R PFAM: beta-ketoacyl synthase; Thioesterase; acyl transferase domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_5010 beta-ketoacyl synthase; beta-ketoacyl synthase complement(6022514..6028036) Mycobacterium vanbaalenii PYR-1 4645035 YP_956412.1 CDS Mvan_5641 NC_008726.1 6028093 6029982 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(6028093..6029982) Mycobacterium vanbaalenii PYR-1 4645036 YP_956413.1 CDS Mvan_5642 NC_008726.1 6030160 6031176 R PFAM: cutinase; KEGG: mmc:Mmcs_5012 cutinase; cutinase complement(6030160..6031176) Mycobacterium vanbaalenii PYR-1 4645037 YP_956414.1 CDS Mvan_5643 NC_008726.1 6031223 6031672 R KEGG: mmc:Mmcs_5013 hypothetical protein; hypothetical protein complement(6031223..6031672) Mycobacterium vanbaalenii PYR-1 4645038 YP_956415.1 CDS Mvan_5644 NC_008726.1 6031732 6032619 R PFAM: putative esterase; KEGG: mmc:Mmcs_5014 putative esterase; putative esterase complement(6031732..6032619) Mycobacterium vanbaalenii PYR-1 4645039 YP_956416.1 CDS Mvan_5645 NC_008726.1 6032782 6033843 R PFAM: putative esterase; KEGG: mmc:Mmcs_5015 putative esterase; putative esterase complement(6032782..6033843) Mycobacterium vanbaalenii PYR-1 4645040 YP_956417.1 CDS Mvan_5646 NC_008726.1 6034111 6036117 R KEGG: mmc:Mmcs_5016 hypothetical protein; hypothetical protein complement(6034111..6036117) Mycobacterium vanbaalenii PYR-1 4645041 YP_956418.1 CDS Mvan_5647 NC_008726.1 6036095 6037024 R catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase complement(6036095..6037024) Mycobacterium vanbaalenii PYR-1 4645042 YP_956419.1 CDS Mvan_5648 NC_008726.1 6037021 6037563 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: mmc:Mmcs_5018 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(6037021..6037563) Mycobacterium vanbaalenii PYR-1 4645043 YP_956420.1 CDS Mvan_5649 NC_008726.1 6037556 6039517 R KEGG: mmc:Mmcs_5019 glycosyltransferases-like protein; glycosyltransferase-like protein complement(6037556..6039517) Mycobacterium vanbaalenii PYR-1 4643334 YP_956421.1 CDS Mvan_5650 NC_008726.1 6039514 6040755 R PFAM: UDP-galactopyranose mutase; KEGG: mmc:Mmcs_5020 UDP-galactopyranose mutase; UDP-galactopyranose mutase complement(6039514..6040755) Mycobacterium vanbaalenii PYR-1 4643335 YP_956422.1 CDS Mvan_5651 NC_008726.1 6040927 6041889 D KEGG: mmc:Mmcs_5021 exported repetitive protein precursor PirG (cell surface protein) (EXP53); exported repetitive protein PirG 6040927..6041889 Mycobacterium vanbaalenii PYR-1 4643336 YP_956423.1 CDS Mvan_5652 NC_008726.1 6042013 6043632 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; LGFP repeat protein; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: mmc:Mmcs_5022 LGFP; LGFP repeat-containing protein 6042013..6043632 Mycobacterium vanbaalenii PYR-1 4643337 YP_956424.1 CDS Mvan_5653 NC_008726.1 6043629 6046394 R PFAM: regulatory protein, LuxR; KEGG: mmc:Mmcs_0780 transcriptional regulator, LuxR family; regulatory protein LuxR complement(6043629..6046394) Mycobacterium vanbaalenii PYR-1 4643338 YP_956425.1 CDS Mvan_5654 NC_008726.1 6046461 6047264 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: mmc:Mmcs_5023 Cof protein; cof family hydrolase complement(6046461..6047264) Mycobacterium vanbaalenii PYR-1 4643339 YP_956426.1 CDS Mvan_5655 NC_008726.1 6047270 6048016 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_5024 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(6047270..6048016) Mycobacterium vanbaalenii PYR-1 4643340 YP_956427.1 CDS Mvan_5656 NC_008726.1 6048022 6048810 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_5025 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(6048022..6048810) Mycobacterium vanbaalenii PYR-1 4643341 YP_956428.1 CDS Mvan_5657 NC_008726.1 6048971 6050533 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_5026 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 6048971..6050533 Mycobacterium vanbaalenii PYR-1 4643342 YP_956429.1 CDS Mvan_5658 NC_008726.1 6050530 6050877 D KEGG: mmc:Mmcs_5027 hypothetical protein; hypothetical protein 6050530..6050877 Mycobacterium vanbaalenii PYR-1 4643343 YP_956430.1 CDS Mvan_5659 NC_008726.1 6050885 6052144 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(6050885..6052144) Mycobacterium vanbaalenii PYR-1 4643344 YP_956431.1 CDS Mvan_5660 NC_008726.1 6052269 6053651 D KEGG: mmc:Mmcs_5030 hypothetical protein; hypothetical protein 6052269..6053651 Mycobacterium vanbaalenii PYR-1 4643345 YP_956432.1 CDS Mvan_5661 NC_008726.1 6054253 6054957 R PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_5033 phosphoglycerate mutase; phosphoglycerate mutase complement(6054253..6054957) Mycobacterium vanbaalenii PYR-1 4643346 YP_956433.1 CDS Mvan_5662 NC_008726.1 6054954 6055892 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(6054954..6055892) Mycobacterium vanbaalenii PYR-1 4643347 YP_956434.1 CDS Mvan_5663 NC_008726.1 6056005 6056805 D KEGG: mmc:Mmcs_5035 hypothetical protein; hypothetical protein 6056005..6056805 Mycobacterium vanbaalenii PYR-1 4643348 YP_956435.1 CDS Mvan_5664 NC_008726.1 6056843 6057610 D PFAM: Abortive infection protein; KEGG: mmc:Mmcs_5036 abortive infection protein; abortive infection protein 6056843..6057610 Mycobacterium vanbaalenii PYR-1 4643349 YP_956436.1 CDS Mvan_5665 NC_008726.1 6057992 6058912 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mmc:Mmcs_5038 cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 6057992..6058912 Mycobacterium vanbaalenii PYR-1 4643350 YP_956437.1 CDS Mvan_5666 NC_008726.1 6059001 6059591 D PFAM: Ferritin, Dps family protein; KEGG: mmc:Mmcs_5039 ferritin and Dps; Dps family ferritin 6059001..6059591 Mycobacterium vanbaalenii PYR-1 4643351 YP_956438.1 CDS Mvan_5667 NC_008726.1 6059605 6060426 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mmc:Mmcs_5040 glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(6059605..6060426) Mycobacterium vanbaalenii PYR-1 4643352 YP_956439.1 CDS Mvan_5668 NC_008726.1 6060431 6061450 R KEGG: mmc:Mmcs_5041 hypothetical protein; hypothetical protein complement(6060431..6061450) Mycobacterium vanbaalenii PYR-1 4643353 YP_956440.1 CDS Mvan_5669 NC_008726.1 6061479 6061820 R PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_5042 rhodanese-like protein; rhodanese domain-containing protein complement(6061479..6061820) Mycobacterium vanbaalenii PYR-1 4643354 YP_956441.1 CDS Mvan_5670 NC_008726.1 6062377 6062718 R PFAM: peptidase S24, S26A and S26B; putative phage repressor complement(6062377..6062718) Mycobacterium vanbaalenii PYR-1 4643355 YP_956442.1 CDS Mvan_5671 NC_008726.1 6062741 6063163 D KEGG: sco:SCO5254 superoxide dismutase; superoxide dismutase 6062741..6063163 Mycobacterium vanbaalenii PYR-1 4643356 YP_956443.1 CDS Mvan_5672 NC_008726.1 6063328 6063861 D KEGG: mmc:Mmcs_5045 hypothetical protein; hypothetical protein 6063328..6063861 Mycobacterium vanbaalenii PYR-1 4643357 YP_956444.1 CDS Mvan_5673 NC_008726.1 6064363 6064761 D KEGG: mmc:Mmcs_5047 hypothetical protein; hypothetical protein 6064363..6064761 Mycobacterium vanbaalenii PYR-1 4643358 YP_956445.1 CDS Mvan_5674 NC_008726.1 6064792 6065979 R KEGG: mmc:Mmcs_5048 hypothetical protein; hypothetical protein complement(6064792..6065979) Mycobacterium vanbaalenii PYR-1 4646195 YP_956446.1 CDS Mvan_5675 NC_008726.1 6065976 6066467 R KEGG: mmc:Mmcs_5049 hypothetical protein; hypothetical protein complement(6065976..6066467) Mycobacterium vanbaalenii PYR-1 4646196 YP_956447.1 CDS Mvan_5676 NC_008726.1 6066531 6067472 R KEGG: mmc:Mmcs_5050 hypothetical protein; hypothetical protein complement(6066531..6067472) Mycobacterium vanbaalenii PYR-1 4646197 YP_956448.1 CDS Mvan_5677 NC_008726.1 6067723 6068379 D KEGG: mmc:Mmcs_5051 hypothetical protein; hypothetical protein 6067723..6068379 Mycobacterium vanbaalenii PYR-1 4646198 YP_956449.1 CDS Mvan_5678 NC_008726.1 6068384 6068905 D KEGG: nfa:nfa30670 hypothetical protein; hypothetical protein 6068384..6068905 Mycobacterium vanbaalenii PYR-1 4646199 YP_956450.1 CDS Mvan_5679 NC_008726.1 6068943 6069497 D PFAM: copper resistance protein CopC; KEGG: mmc:Mmcs_5052 copper resistance protein CopC; copper resistance protein CopC 6068943..6069497 Mycobacterium vanbaalenii PYR-1 4646200 YP_956451.1 CDS Mvan_5680 NC_008726.1 6069494 6070417 D PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_5053 copper resistance D; copper resistance D domain-containing protein 6069494..6070417 Mycobacterium vanbaalenii PYR-1 4646201 YP_956452.1 CDS Mvan_5681 NC_008726.1 6070493 6070939 D KEGG: mmc:Mmcs_5054 hypothetical protein; hypothetical protein 6070493..6070939 Mycobacterium vanbaalenii PYR-1 4646202 YP_956453.1 CDS Mvan_5682 NC_008726.1 6070987 6071469 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 6070987..6071469 Mycobacterium vanbaalenii PYR-1 4646203 YP_956454.1 CDS Mvan_5683 NC_008726.1 6071470 6072945 R KEGG: mpa:MAP0180 hypothetical protein; hypothetical protein complement(6071470..6072945) Mycobacterium vanbaalenii PYR-1 4646204 YP_956455.1 CDS Mvan_5684 NC_008726.1 6072989 6073663 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5058 transcriptional regulator, TetR family; TetR family transcriptional regulator 6072989..6073663 Mycobacterium vanbaalenii PYR-1 4646205 YP_956456.1 CDS Mvan_5685 NC_008726.1 6073689 6074963 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 6073689..6074963 Mycobacterium vanbaalenii PYR-1 4646206 YP_956457.1 CDS Mvan_5686 NC_008726.1 6075009 6075824 D KEGG: sco:SCO2849 hypothetical protein; hypothetical protein 6075009..6075824 Mycobacterium vanbaalenii PYR-1 4646207 YP_956458.1 CDS Mvan_5687 NC_008726.1 6075957 6076964 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mmc:Mmcs_5061 PHP-like protein; hypothetical protein complement(6075957..6076964) Mycobacterium vanbaalenii PYR-1 4646208 YP_956459.1 CDS Mvan_5688 NC_008726.1 6077054 6078244 D KEGG: bja:blr0521 hypothetical protein; hypothetical protein 6077054..6078244 Mycobacterium vanbaalenii PYR-1 4646209 YP_956460.1 CDS Mvan_5689 NC_008726.1 6078241 6078561 D hypothetical protein 6078241..6078561 Mycobacterium vanbaalenii PYR-1 4646210 YP_956461.1 CDS Mvan_5690 NC_008726.1 6078549 6079019 D KEGG: mmc:Mmcs_0063 hypothetical protein; hypothetical protein 6078549..6079019 Mycobacterium vanbaalenii PYR-1 4646211 YP_956462.1 CDS Mvan_5691 NC_008726.1 6079031 6080461 D hypothetical protein 6079031..6080461 Mycobacterium vanbaalenii PYR-1 4646212 YP_956463.1 CDS Mvan_5692 NC_008726.1 6080580 6080957 D PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_4316 transcriptional regulator, ArsR family; regulatory protein ArsR 6080580..6080957 Mycobacterium vanbaalenii PYR-1 4646213 YP_956464.1 CDS Mvan_5693 NC_008726.1 6080954 6082600 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mmc:Mmcs_4315 sulphate transporter; sulfate transporter 6080954..6082600 Mycobacterium vanbaalenii PYR-1 4646214 YP_956465.1 CDS Mvan_5694 NC_008726.1 6082602 6083174 R KEGG: mmc:Mmcs_5062 hypothetical protein; hypothetical protein complement(6082602..6083174) Mycobacterium vanbaalenii PYR-1 4646215 YP_956466.1 CDS Mvan_5695 NC_008726.1 6083227 6084087 D PFAM: luciferase family protein; KEGG: mmc:Mmcs_5063 luciferase-like protein; luciferase family protein 6083227..6084087 Mycobacterium vanbaalenii PYR-1 4646216 YP_956467.1 CDS Mvan_5696 NC_008726.1 6084167 6084307 R KEGG: mmc:Mmcs_5064 hypothetical protein; hypothetical protein complement(6084167..6084307) Mycobacterium vanbaalenii PYR-1 4646217 YP_956468.1 CDS gltD NC_008726.1 6084573 6086039 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(6084573..6086039) Mycobacterium vanbaalenii PYR-1 4646218 YP_956469.1 CDS Mvan_5698 NC_008726.1 6086032 6090576 R PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mmc:Mmcs_5066 glutamate synthase (ferredoxin); glutamate synthase complement(6086032..6090576) Mycobacterium vanbaalenii PYR-1 4646219 YP_956470.1 CDS Mvan_5699 NC_008726.1 6091294 6092097 D TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_5067 phenylacetic acid degradation-related protein; hypothetical protein 6091294..6092097 Mycobacterium vanbaalenii PYR-1 4646220 YP_956471.1 CDS Mvan_5700 NC_008726.1 6092181 6092729 R PFAM: Ferritin, Dps family protein; KEGG: mmc:Mmcs_5072 ferritin and Dps; Dps family ferritin complement(6092181..6092729) Mycobacterium vanbaalenii PYR-1 4646447 YP_956472.1 CDS Mvan_5701 NC_008726.1 6092808 6093719 R KEGG: mmc:Mmcs_5073 hypothetical protein; hypothetical protein complement(6092808..6093719) Mycobacterium vanbaalenii PYR-1 4646448 YP_956473.1 CDS Mvan_5702 NC_008726.1 6093729 6094103 R PFAM: protein of unknown function DUF427; KEGG: mmc:Mmcs_5084 protein of unknown function DUF427; hypothetical protein complement(6093729..6094103) Mycobacterium vanbaalenii PYR-1 4646449 YP_956474.1 CDS Mvan_5703 NC_008726.1 6094119 6095537 R PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5086 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(6094119..6095537) Mycobacterium vanbaalenii PYR-1 4646450 YP_956475.1 CDS Mvan_5704 NC_008726.1 6095554 6096372 R PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_5088 O-methyltransferase-like protein; O-methyltransferase domain-containing protein complement(6095554..6096372) Mycobacterium vanbaalenii PYR-1 4646451 YP_956476.1 CDS Mvan_5705 NC_008726.1 6096436 6097455 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_5089 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(6096436..6097455) Mycobacterium vanbaalenii PYR-1 4646452 YP_956477.1 CDS Mvan_5706 NC_008726.1 6097452 6097970 R KEGG: mmc:Mmcs_5090 hypothetical protein; hypothetical protein complement(6097452..6097970) Mycobacterium vanbaalenii PYR-1 4646453 YP_956478.1 CDS Mvan_5707 NC_008726.1 6098014 6098427 R KEGG: mmc:Mmcs_5267 hypothetical protein; hypothetical protein complement(6098014..6098427) Mycobacterium vanbaalenii PYR-1 4646454 YP_956479.1 CDS Mvan_5708 NC_008726.1 6098496 6098960 D KEGG: mmc:Mmcs_5091 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 6098496..6098960 Mycobacterium vanbaalenii PYR-1 4646455 YP_956480.1 CDS Mvan_5709 NC_008726.1 6098957 6099466 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 6098957..6099466 Mycobacterium vanbaalenii PYR-1 4646456 YP_956481.1 CDS Mvan_5710 NC_008726.1 6099447 6099815 R hypothetical protein complement(6099447..6099815) Mycobacterium vanbaalenii PYR-1 4646457 YP_956482.1 CDS Mvan_5711 NC_008726.1 6099820 6100620 R KEGG: mpa:MAP2472 hypothetical protein; hypothetical protein complement(6099820..6100620) Mycobacterium vanbaalenii PYR-1 4646458 YP_956483.1 CDS Mvan_5712 NC_008726.1 6100971 6102323 R PFAM: cytochrome P450; KEGG: mmc:Mmcs_5093 cytochrome P450; cytochrome P450 complement(6100971..6102323) Mycobacterium vanbaalenii PYR-1 4646459 YP_956484.1 CDS Mvan_5713 NC_008726.1 6102419 6103015 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5094 transcriptional regulator, TetR family; TetR family transcriptional regulator 6102419..6103015 Mycobacterium vanbaalenii PYR-1 4646460 YP_956485.1 CDS Mvan_5714 NC_008726.1 6103019 6103588 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5095 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(6103019..6103588) Mycobacterium vanbaalenii PYR-1 4646461 YP_956486.1 CDS Mvan_5715 NC_008726.1 6103713 6104396 D KEGG: mmc:Mmcs_5096 hypothetical protein; hypothetical protein 6103713..6104396 Mycobacterium vanbaalenii PYR-1 4646462 YP_956487.1 CDS Mvan_5716 NC_008726.1 6104393 6105457 R KEGG: mmc:Mmcs_5100 hypothetical protein; hypothetical protein complement(6104393..6105457) Mycobacterium vanbaalenii PYR-1 4646463 YP_956488.1 CDS Mvan_5717 NC_008726.1 6105450 6106175 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_5101 methyltransferase type 11; type 11 methyltransferase complement(6105450..6106175) Mycobacterium vanbaalenii PYR-1 4646464 YP_956489.1 CDS Mvan_5718 NC_008726.1 6106169 6107404 R PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_5102 glycosyl transferase, group 1; group 1 glycosyl transferase complement(6106169..6107404) Mycobacterium vanbaalenii PYR-1 4646465 YP_956490.1 CDS Mvan_5719 NC_008726.1 6107590 6108045 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_5103 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein complement(6107590..6108045) Mycobacterium vanbaalenii PYR-1 4646466 YP_956491.1 CDS Mvan_5720 NC_008726.1 6108093 6108395 D KEGG: mmc:Mmcs_5104 hypothetical protein; hypothetical protein 6108093..6108395 Mycobacterium vanbaalenii PYR-1 4646467 YP_956492.1 CDS Mvan_5721 NC_008726.1 6108498 6109022 R hypothetical protein complement(6108498..6109022) Mycobacterium vanbaalenii PYR-1 4646468 YP_956493.1 CDS Mvan_5722 NC_008726.1 6109095 6110489 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5107 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 6109095..6110489 Mycobacterium vanbaalenii PYR-1 4646469 YP_956494.1 CDS Mvan_5723 NC_008726.1 6110493 6112922 R KEGG: sco:SCO1025 integral membrane protein; integral membrane protein complement(6110493..6112922) Mycobacterium vanbaalenii PYR-1 4646470 YP_956495.1 CDS Mvan_5724 NC_008726.1 6113048 6114898 D KEGG: mmc:Mmcs_5110 hypothetical protein; hypothetical protein 6113048..6114898 Mycobacterium vanbaalenii PYR-1 4646471 YP_956496.1 CDS Mvan_5725 NC_008726.1 6115041 6115463 D KEGG: mmc:Mmcs_5111 hypothetical protein; hypothetical protein 6115041..6115463 Mycobacterium vanbaalenii PYR-1 4646472 YP_956497.1 CDS Mvan_5726 NC_008726.1 6115475 6116746 D KEGG: mmc:Mmcs_5112 hypothetical protein; hypothetical protein 6115475..6116746 Mycobacterium vanbaalenii PYR-1 4644181 YP_956498.1 CDS Mvan_5727 NC_008726.1 6116777 6117454 D PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: mmc:Mmcs_5113 response regulator receiver and ANTAR domain protein; putative PAS/PAC sensor protein 6116777..6117454 Mycobacterium vanbaalenii PYR-1 4644182 YP_956499.1 CDS Mvan_5728 NC_008726.1 6117451 6118011 D PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_5114 isochorismatase hydrolase; isochorismatase hydrolase 6117451..6118011 Mycobacterium vanbaalenii PYR-1 4644183 YP_956500.1 CDS Mvan_5729 NC_008726.1 6118094 6120265 D KEGG: mpa:MAP3262c GlgX_2; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 6118094..6120265 Mycobacterium vanbaalenii PYR-1 4644184 YP_956501.1 CDS Mvan_5730 NC_008726.1 6120433 6121482 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: zmo:ZMO1604 phosphodiesterase-nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(6120433..6121482) Mycobacterium vanbaalenii PYR-1 4644185 YP_956502.1 CDS Mvan_5731 NC_008726.1 6121479 6122510 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related; ABC transporter--like protein complement(6121479..6122510) Mycobacterium vanbaalenii PYR-1 4644186 YP_956503.1 CDS Mvan_5732 NC_008726.1 6122519 6123355 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1435 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(6122519..6123355) Mycobacterium vanbaalenii PYR-1 4644187 YP_956504.1 CDS Mvan_5733 NC_008726.1 6123352 6124287 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0347 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(6123352..6124287) Mycobacterium vanbaalenii PYR-1 4644188 YP_956505.1 CDS Mvan_5734 NC_008726.1 6124287 6125432 R KEGG: pfl:PFL_4387 ABC transporter, periplasmic substrate-binding protein; ABC transporter periplasmic substrate-binding protein complement(6124287..6125432) Mycobacterium vanbaalenii PYR-1 4644189 YP_956506.1 CDS Mvan_5735 NC_008726.1 6125602 6126927 R KEGG: mmc:Mmcs_5120 hypothetical protein; hypothetical protein complement(6125602..6126927) Mycobacterium vanbaalenii PYR-1 4644190 YP_956507.1 CDS Mvan_5736 NC_008726.1 6126979 6127977 R KEGG: mmc:Mmcs_5050 hypothetical protein; hypothetical protein complement(6126979..6127977) Mycobacterium vanbaalenii PYR-1 4644191 YP_956508.1 CDS Mvan_5737 NC_008726.1 6128123 6128935 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_5122 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 6128123..6128935 Mycobacterium vanbaalenii PYR-1 4644192 YP_956509.1 CDS Mvan_5738 NC_008726.1 6128942 6129529 D TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mmc:Mmcs_5123 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 6128942..6129529 Mycobacterium vanbaalenii PYR-1 4644193 YP_956510.1 CDS Mvan_5739 NC_008726.1 6129516 6130562 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related; ABC transporter--like protein complement(6129516..6130562) Mycobacterium vanbaalenii PYR-1 4644194 YP_956511.1 CDS Mvan_5740 NC_008726.1 6130559 6131317 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_5125 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(6130559..6131317) Mycobacterium vanbaalenii PYR-1 4644195 YP_956512.1 CDS Mvan_5741 NC_008726.1 6131340 6132191 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_5126 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(6131340..6132191) Mycobacterium vanbaalenii PYR-1 4644196 YP_956513.1 CDS Mvan_5742 NC_008726.1 6132204 6133355 R KEGG: mmc:Mmcs_5127 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(6132204..6133355) Mycobacterium vanbaalenii PYR-1 4644197 YP_956514.1 CDS Mvan_5743 NC_008726.1 6133389 6133883 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_5129 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like protein 6133389..6133883 Mycobacterium vanbaalenii PYR-1 4644198 YP_956515.1 CDS Mvan_5744 NC_008726.1 6133969 6134556 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1379 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 6133969..6134556 Mycobacterium vanbaalenii PYR-1 4644199 YP_956516.1 CDS Mvan_5745 NC_008726.1 6134532 6135461 R KEGG: mmc:Mmcs_5139 hypothetical protein; hypothetical protein complement(6134532..6135461) Mycobacterium vanbaalenii PYR-1 4644200 YP_956517.1 CDS Mvan_5746 NC_008726.1 6135547 6135885 D KEGG: mmc:Mmcs_2715 hypothetical protein; hypothetical protein 6135547..6135885 Mycobacterium vanbaalenii PYR-1 4644201 YP_956518.1 CDS Mvan_5747 NC_008726.1 6135909 6136202 R KEGG: mmc:Mmcs_5140 hypothetical protein; hypothetical protein complement(6135909..6136202) Mycobacterium vanbaalenii PYR-1 4644202 YP_956519.1 CDS Mvan_5748 NC_008726.1 6136199 6137524 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3836 general substrate transporter; general substrate transporter complement(6136199..6137524) Mycobacterium vanbaalenii PYR-1 4644203 YP_956520.1 CDS Mvan_5749 NC_008726.1 6137566 6138534 R KEGG: mpa:MAP1671 hypothetical protein; hypothetical protein complement(6137566..6138534) Mycobacterium vanbaalenii PYR-1 4644204 YP_956521.1 CDS Mvan_5750 NC_008726.1 6138539 6140923 R PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mpa:MAP3492 putative trehalose/maltose hydrolase; Kojibiose phosphorylase complement(6138539..6140923) Mycobacterium vanbaalenii PYR-1 4644205 YP_956522.1 CDS Mvan_5751 NC_008726.1 6140923 6141633 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_1172 beta-phosphoglucomutase hydrolase; beta-phosphoglucomutase family hydrolase complement(6140923..6141633) Mycobacterium vanbaalenii PYR-1 4643708 YP_956523.1 CDS Mvan_5752 NC_008726.1 6141657 6142523 D PFAM: luciferase family protein; KEGG: mpa:MAP0128c hypothetical protein; luciferase family protein 6141657..6142523 Mycobacterium vanbaalenii PYR-1 4643709 YP_956524.1 CDS Mvan_5753 NC_008726.1 6142520 6143392 R PFAM: Rhomboid family protein; KEGG: mmc:Mmcs_5148 rhomboid-like protein; rhomboid family protein complement(6142520..6143392) Mycobacterium vanbaalenii PYR-1 4643710 YP_956525.1 CDS Mvan_5754 NC_008726.1 6143394 6143807 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_5149 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6143394..6143807) Mycobacterium vanbaalenii PYR-1 4643711 YP_956526.1 CDS Mvan_5755 NC_008726.1 6144108 6144518 D KEGG: mmc:Mmcs_5179 hypothetical protein; hypothetical protein 6144108..6144518 Mycobacterium vanbaalenii PYR-1 4643712 YP_956527.1 CDS Mvan_5756 NC_008726.1 6144596 6145051 D KEGG: mpa:MAP1630c hypothetical protein; hypothetical protein 6144596..6145051 Mycobacterium vanbaalenii PYR-1 4643713 YP_956528.1 CDS Mvan_5757 NC_008726.1 6145138 6146229 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_5183 beta-lactamase; beta-lactamase 6145138..6146229 Mycobacterium vanbaalenii PYR-1 4643714 YP_956529.1 CDS Mvan_5758 NC_008726.1 6146303 6147289 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 6146303..6147289 Mycobacterium vanbaalenii PYR-1 4643715 YP_956530.1 CDS Mvan_5759 NC_008726.1 6147282 6148214 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCP1.317c putative short-chain oxidoreductase; short-chain dehydrogenase/reductase SDR 6147282..6148214 Mycobacterium vanbaalenii PYR-1 4643716 YP_956531.1 CDS Mvan_5760 NC_008726.1 6148282 6149400 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP1428c hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(6148282..6149400) Mycobacterium vanbaalenii PYR-1 4643717 YP_956532.1 CDS Mvan_5761 NC_008726.1 6149397 6150167 R PFAM: glutamine cyclotransferase; KEGG: mmc:Mmcs_2900 glutamine cyclotransferase; glutamine cyclotransferase complement(6149397..6150167) Mycobacterium vanbaalenii PYR-1 4643718 YP_956533.1 CDS Mvan_5762 NC_008726.1 6150198 6151358 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2286 alcohol dehydrogenase GroES-like protein; alcohol dehydrogenase 6150198..6151358 Mycobacterium vanbaalenii PYR-1 4643719 YP_956534.1 CDS Mvan_5763 NC_008726.1 6151566 6151919 R hypothetical protein complement(6151566..6151919) Mycobacterium vanbaalenii PYR-1 4643720 YP_956535.1 CDS Mvan_5764 NC_008726.1 6151901 6153370 R KEGG: cef:CE1601 hypothetical protein; hypothetical protein complement(6151901..6153370) Mycobacterium vanbaalenii PYR-1 4643721 YP_956536.1 CDS Mvan_5765 NC_008726.1 6153464 6155125 D PFAM: GAF domain protein; KEGG: sma:SAV1419 hypothetical protein; transcriptional regulator CdaR 6153464..6155125 Mycobacterium vanbaalenii PYR-1 4643722 YP_956537.1 CDS Mvan_5766 NC_008726.1 6155162 6159094 R KEGG: mpa:MAP1684 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like; ATP-dependent helicase HrpA complement(6155162..6159094) Mycobacterium vanbaalenii PYR-1 4643723 YP_956538.1 CDS Mvan_5767 NC_008726.1 6159120 6159419 R KEGG: mmc:Mmcs_4436 hypothetical protein; hypothetical protein complement(6159120..6159419) Mycobacterium vanbaalenii PYR-1 4643724 YP_956539.1 CDS Mvan_5768 NC_008726.1 6159636 6160286 D KEGG: mmc:Mmcs_3857 hypothetical protein; hypothetical protein 6159636..6160286 Mycobacterium vanbaalenii PYR-1 4643725 YP_956540.1 CDS Mvan_5769 NC_008726.1 6160302 6160871 D hypothetical protein 6160302..6160871 Mycobacterium vanbaalenii PYR-1 4643726 YP_956541.1 CDS Mvan_5770 NC_008726.1 6160879 6161772 R KEGG: mpa:MAP1910c hypothetical protein; hypothetical protein complement(6160879..6161772) Mycobacterium vanbaalenii PYR-1 4643727 YP_956542.1 CDS Mvan_5771 NC_008726.1 6161920 6163080 D hypothetical protein 6161920..6163080 Mycobacterium vanbaalenii PYR-1 4643728 YP_956543.1 CDS Mvan_5772 NC_008726.1 6163099 6164547 D PFAM: protein of unknown function UPF0061; KEGG: mpa:MAP3154 hypothetical protein; hypothetical protein 6163099..6164547 Mycobacterium vanbaalenii PYR-1 4643729 YP_956544.1 CDS Mvan_5773 NC_008726.1 6164611 6165996 D PFAM: protein of unknown function UPF0089; KEGG: mtu:Rv3480c hypothetical protein; hypothetical protein 6164611..6165996 Mycobacterium vanbaalenii PYR-1 4643730 YP_956545.1 CDS Mvan_5774 NC_008726.1 6165993 6167543 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_2855 protein of unknown function DUF222; HNH endonuclease complement(6165993..6167543) Mycobacterium vanbaalenii PYR-1 4643731 YP_956546.1 CDS Mvan_5775 NC_008726.1 6167757 6168761 R KEGG: pol:Bpro_3166 hypothetical protein; hypothetical protein complement(6167757..6168761) Mycobacterium vanbaalenii PYR-1 4643732 YP_956547.1 CDS Mvan_5776 NC_008726.1 6168847 6170301 D PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0347 aminotransferase class-III; hypothetical protein 6168847..6170301 Mycobacterium vanbaalenii PYR-1 4643733 YP_956548.1 CDS Mvan_5777 NC_008726.1 6170306 6171022 R KEGG: mbo:Mb1777 hypothetical protein; hypothetical protein complement(6170306..6171022) Mycobacterium vanbaalenii PYR-1 4645720 YP_956549.1 CDS Mvan_5778 NC_008726.1 6171560 6172330 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0350 hypothetical protein; short-chain dehydrogenase/reductase SDR 6171560..6172330 Mycobacterium vanbaalenii PYR-1 4645721 YP_956550.1 CDS Mvan_5779 NC_008726.1 6172359 6173393 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: mmc:Mmcs_5224 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 6172359..6173393 Mycobacterium vanbaalenii PYR-1 4645722 YP_956551.1 CDS Mvan_5780 NC_008726.1 6173395 6173946 R PFAM: protein of unknown function DUF1697; KEGG: ade:Adeh_2296 protein of unknown function DUF1697; hypothetical protein complement(6173395..6173946) Mycobacterium vanbaalenii PYR-1 4645723 YP_956552.1 CDS Mvan_5781 NC_008726.1 6173976 6174362 D KEGG: mmc:Mmcs_4957 hypothetical protein; hypothetical protein 6173976..6174362 Mycobacterium vanbaalenii PYR-1 4645724 YP_956553.1 CDS Mvan_5782 NC_008726.1 6174402 6174944 D hypothetical protein 6174402..6174944 Mycobacterium vanbaalenii PYR-1 4645725 YP_956554.1 CDS Mvan_5783 NC_008726.1 6174976 6175623 D PFAM: MOSC domain containing protein; KEGG: mmc:Mmcs_4172 MOSC domain containing protein; MOSC domain-containing protein 6174976..6175623 Mycobacterium vanbaalenii PYR-1 4645726 YP_956555.1 CDS Mvan_5784 NC_008726.1 6175711 6176895 D PFAM: MscS Mechanosensitive ion channel; KEGG: mmc:Mmcs_2263 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 6175711..6176895 Mycobacterium vanbaalenii PYR-1 4645727 YP_956556.1 CDS Mvan_5785 NC_008726.1 6176901 6177821 D KEGG: mmc:Mmcs_4715 hypothetical protein; hypothetical protein 6176901..6177821 Mycobacterium vanbaalenii PYR-1 4645728 YP_956557.1 CDS Mvan_5786 NC_008726.1 6177826 6178203 R KEGG: mmc:Mmcs_1553 hypothetical protein; hypothetical protein complement(6177826..6178203) Mycobacterium vanbaalenii PYR-1 4645729 YP_956558.1 CDS Mvan_5787 NC_008726.1 6178401 6179117 R PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_5262 NUDIX hydrolase; NUDIX hydrolase complement(6178401..6179117) Mycobacterium vanbaalenii PYR-1 4645730 YP_956559.1 CDS Mvan_5788 NC_008726.1 6179183 6180172 R KEGG: mmc:Mmcs_5180 hypothetical protein; hypothetical protein complement(6179183..6180172) Mycobacterium vanbaalenii PYR-1 4645731 YP_956560.1 CDS Mvan_5789 NC_008726.1 6180404 6181414 D KEGG: mmc:Mmcs_4851 hypothetical protein; hypothetical protein 6180404..6181414 Mycobacterium vanbaalenii PYR-1 4645732 YP_956561.1 CDS Mvan_5790 NC_008726.1 6181437 6181646 R SMART: zinc finger, CDGSH-type domain protein; KEGG: nfa:nfa48540 hypothetical protein; zinc finger CDGSH-type domain-containing protein complement(6181437..6181646) Mycobacterium vanbaalenii PYR-1 4645733 YP_956562.1 CDS Mvan_5791 NC_008726.1 6181643 6182350 R TIGRFAM: putative methylase; PFAM: methyltransferase small; KEGG: mmc:Mmcs_4852 putative methylase; putative methylase complement(6181643..6182350) Mycobacterium vanbaalenii PYR-1 4645734 YP_956563.1 CDS Mvan_5792 NC_008726.1 6182402 6182656 D KEGG: mmc:Mmcs_1888 hypothetical protein; hypothetical protein 6182402..6182656 Mycobacterium vanbaalenii PYR-1 4645735 YP_956564.1 CDS Mvan_5793 NC_008726.1 6182661 6183362 R PFAM: cutinase; KEGG: mmc:Mmcs_4980 cutinase; cutinase complement(6182661..6183362) Mycobacterium vanbaalenii PYR-1 4645736 YP_956565.1 CDS Mvan_5794 NC_008726.1 6183446 6183805 R hypothetical protein complement(6183446..6183805) Mycobacterium vanbaalenii PYR-1 4645737 YP_956566.1 CDS Mvan_5795 NC_008726.1 6183821 6184180 R KEGG: mmc:Mmcs_5147 hypothetical protein; hypothetical protein complement(6183821..6184180) Mycobacterium vanbaalenii PYR-1 4645738 YP_956567.1 CDS Mvan_5796 NC_008726.1 6184184 6184741 D TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_2882 peptidase C56, PfpI; PfpI family intracellular peptidase 6184184..6184741 Mycobacterium vanbaalenii PYR-1 4645739 YP_956568.1 CDS Mvan_5797 NC_008726.1 6184809 6185210 D KEGG: mmc:Mmcs_2518 hypothetical protein; hypothetical protein 6184809..6185210 Mycobacterium vanbaalenii PYR-1 4645740 YP_956569.1 CDS Mvan_5798 NC_008726.1 6185245 6185682 D KEGG: mbo:Mb0434c possible transmembrane protein; putative transmembrane protein 6185245..6185682 Mycobacterium vanbaalenii PYR-1 4645741 YP_956570.1 CDS Mvan_5799 NC_008726.1 6185727 6186641 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 6185727..6186641 Mycobacterium vanbaalenii PYR-1 4645742 YP_956571.1 CDS Mvan_5800 NC_008726.1 6186731 6187978 D PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0903 major facilitator superfamily MFS_1; major facilitator superfamily transporter 6186731..6187978 Mycobacterium vanbaalenii PYR-1 4645743 YP_956572.1 CDS Mvan_5801 NC_008726.1 6187975 6189126 R KEGG: mmc:Mmcs_5269 hypothetical protein; hypothetical protein complement(6187975..6189126) Mycobacterium vanbaalenii PYR-1 4645744 YP_956573.1 CDS Mvan_5802 NC_008726.1 6189361 6190809 R PFAM: phospholipase D/Transphosphatidylase; KEGG: mpa:MAP3159 hypothetical protein; phospholipase D/transphosphatidylase complement(6189361..6190809) Mycobacterium vanbaalenii PYR-1 4645745 YP_956574.1 CDS Mvan_5803 NC_008726.1 6190806 6192107 R PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0665 aminotransferase class-III; class III aminotransferase complement(6190806..6192107) Mycobacterium vanbaalenii PYR-1 4647841 YP_956575.1 CDS Mvan_5804 NC_008726.1 6192216 6192944 D PFAM: cutinase; KEGG: mmc:Mmcs_1893 cutinase; cutinase 6192216..6192944 Mycobacterium vanbaalenii PYR-1 4647842 YP_956576.1 CDS Mvan_5805 NC_008726.1 6193071 6194723 D PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_3323 serine phosphatase; putative GAF sensor protein 6193071..6194723 Mycobacterium vanbaalenii PYR-1 4647843 YP_956577.1 CDS Mvan_5806 NC_008726.1 6194720 6195784 D PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_3324 cobalamin B12-binding protein; cobalamin B12-binding domain-containing protein 6194720..6195784 Mycobacterium vanbaalenii PYR-1 4647844 YP_956578.1 CDS Mvan_5807 NC_008726.1 6195781 6196131 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_3325 anti-sigma-factor antagonist; anti-sigma-factor antagonist 6195781..6196131 Mycobacterium vanbaalenii PYR-1 4647845 YP_956579.1 CDS Mvan_5808 NC_008726.1 6196183 6197175 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4503 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 6196183..6197175 Mycobacterium vanbaalenii PYR-1 4647846 YP_956580.1 CDS Mvan_5809 NC_008726.1 6197202 6197570 R KEGG: nfa:nfa18110 hypothetical protein; hypothetical protein complement(6197202..6197570) Mycobacterium vanbaalenii PYR-1 4647847 YP_956581.1 CDS Mvan_5810 NC_008726.1 6197599 6198030 R PFAM: thioesterase superfamily protein; KEGG: rme:Rmet_1202 thioesterase superfamily; thioesterase superfamily protein complement(6197599..6198030) Mycobacterium vanbaalenii PYR-1 4647848 YP_956582.1 CDS Mvan_5811 NC_008726.1 6198042 6199343 R PFAM: iron-containing alcohol dehydrogenase; KEGG: dge:Dgeo_2520 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(6198042..6199343) Mycobacterium vanbaalenii PYR-1 4647849 YP_956583.1 CDS Mvan_5812 NC_008726.1 6199388 6200230 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_5231 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(6199388..6200230) Mycobacterium vanbaalenii PYR-1 4647850 YP_956584.1 CDS Mvan_5813 NC_008726.1 6200302 6201534 D PFAM: metallophosphoesterase; KEGG: nfa:nfa21160 hypothetical protein; metallophosphoesterase 6200302..6201534 Mycobacterium vanbaalenii PYR-1 4647851 YP_956585.1 CDS Mvan_5814 NC_008726.1 6201592 6202518 D PFAM: acyl-CoA thioesterase; KEGG: mpa:MAP1729c hypothetical protein; acyl-CoA thioesterase 6201592..6202518 Mycobacterium vanbaalenii PYR-1 4647852 YP_956586.1 CDS Mvan_5815 NC_008726.1 6202613 6203377 D PFAM: aminoglycoside phosphotransferase; KEGG: sco:SCP1.305 hypothetical protein; aminoglycoside phosphotransferase 6202613..6203377 Mycobacterium vanbaalenii PYR-1 4647853 YP_956587.1 CDS Mvan_5816 NC_008726.1 6203387 6203821 R PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_2872 hypothetical protein; cyclase/dehydrase complement(6203387..6203821) Mycobacterium vanbaalenii PYR-1 4647854 YP_956588.1 CDS Mvan_5817 NC_008726.1 6203834 6204679 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_2873 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(6203834..6204679) Mycobacterium vanbaalenii PYR-1 4647855 YP_956589.1 CDS Mvan_5818 NC_008726.1 6204732 6207287 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_5261 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 6204732..6207287 Mycobacterium vanbaalenii PYR-1 4647856 YP_956590.1 CDS Mvan_5819 NC_008726.1 6207586 6208410 R PFAM: luciferase family protein; KEGG: sma:SAV7484 N5,N10-methylenetetrahydromethanopterin reductase-related protein; luciferase family protein complement(6207586..6208410) Mycobacterium vanbaalenii PYR-1 4647857 YP_956591.1 CDS Mvan_5820 NC_008726.1 6208601 6209071 D KEGG: mmc:Mmcs_3404 hypothetical protein; hypothetical protein 6208601..6209071 Mycobacterium vanbaalenii PYR-1 4647858 YP_956592.1 CDS Mvan_5821 NC_008726.1 6209150 6210511 R KEGG: mmc:Mmcs_3462 hypothetical protein; hypothetical protein complement(6209150..6210511) Mycobacterium vanbaalenii PYR-1 4647859 YP_956593.1 CDS Mvan_5822 NC_008726.1 6210755 6212227 D PFAM: Amidase; KEGG: mmc:Mmcs_5293 amidase; amidase 6210755..6212227 Mycobacterium vanbaalenii PYR-1 4647860 YP_956594.1 CDS Mvan_5823 NC_008726.1 6212229 6212906 R KEGG: rpe:RPE_2231 hypothetical protein; hypothetical protein complement(6212229..6212906) Mycobacterium vanbaalenii PYR-1 4647861 YP_956595.1 CDS Mvan_5824 NC_008726.1 6212930 6213238 R KEGG: rpc:RPC_2750 hypothetical protein; hypothetical protein complement(6212930..6213238) Mycobacterium vanbaalenii PYR-1 4647862 YP_956596.1 CDS Mvan_5825 NC_008726.1 6213235 6213855 R TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: rpb:RPB_2704 nitrile hydratase, alpha subunit; nitrile hydratase subunit alpha complement(6213235..6213855) Mycobacterium vanbaalenii PYR-1 4647863 YP_956597.1 CDS Mvan_5826 NC_008726.1 6213852 6214586 R KEGG: rpc:RPC_2749 nitrile hydratase; nitrile hydratase complement(6213852..6214586) Mycobacterium vanbaalenii PYR-1 4647864 YP_956598.1 CDS Mvan_5827 NC_008726.1 6214583 6215107 R KEGG: cpr:CPR_1285 hypothetical protein; hypothetical protein complement(6214583..6215107) Mycobacterium vanbaalenii PYR-1 4647865 YP_956599.1 CDS Mvan_5828 NC_008726.1 6215308 6216246 D PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: sco:SCO0466 AraC family transcriptional regulator; AraC family transcriptional regulator 6215308..6216246 Mycobacterium vanbaalenii PYR-1 4643410 YP_956600.1 CDS Mvan_5829 NC_008726.1 6216249 6217265 R PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: nfa:nfa23690 putative transcriptional regulator; AraC family transcriptional regulator complement(6216249..6217265) Mycobacterium vanbaalenii PYR-1 4643411 YP_956601.1 CDS Mvan_5830 NC_008726.1 6217368 6218165 D KEGG: mmc:Mmcs_5307 hypothetical protein; hypothetical protein 6217368..6218165 Mycobacterium vanbaalenii PYR-1 4643412 YP_956602.1 CDS Mvan_5831 NC_008726.1 6218179 6218862 D PFAM: regulatory protein, TetR; KEGG: mpa:MAP0930 hypothetical protein; TetR family transcriptional regulator 6218179..6218862 Mycobacterium vanbaalenii PYR-1 4643413 YP_956603.1 CDS Mvan_5832 NC_008726.1 6218875 6219357 D KEGG: mpa:MAP0931 hypothetical protein; hypothetical protein 6218875..6219357 Mycobacterium vanbaalenii PYR-1 4643414 YP_956604.1 CDS Mvan_5833 NC_008726.1 6219531 6219695 D KEGG: mmc:Mmcs_4016 hypothetical protein; hypothetical protein 6219531..6219695 Mycobacterium vanbaalenii PYR-1 4643415 YP_956605.1 CDS Mvan_5834 NC_008726.1 6219715 6220488 D PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_4015 protein of unknown function DUF81; hypothetical protein 6219715..6220488 Mycobacterium vanbaalenii PYR-1 4643416 YP_956606.1 CDS Mvan_5835 NC_008726.1 6220505 6221857 D PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: mmc:Mmcs_4014 beta-lactamase-like protein; beta-lactamase domain-containing protein 6220505..6221857 Mycobacterium vanbaalenii PYR-1 4643417 YP_956607.1 CDS Mvan_5836 NC_008726.1 6221847 6222695 R TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP1660 hypothetical protein; putative methyltransferase complement(6221847..6222695) Mycobacterium vanbaalenii PYR-1 4643418 YP_956608.1 CDS Mvan_5837 NC_008726.1 6222708 6223733 R PFAM: glycoside hydrolase, family 6; KEGG: mmc:Mmcs_5301 cellulase; cellulase complement(6222708..6223733) Mycobacterium vanbaalenii PYR-1 4643419 YP_956609.1 CDS Mvan_5838 NC_008726.1 6223876 6225465 D PFAM: protein of unknown function DUF1212; KEGG: mmc:Mmcs_3914 protein of unknown function DUF1212; hypothetical protein 6223876..6225465 Mycobacterium vanbaalenii PYR-1 4643420 YP_956610.1 CDS Mvan_5839 NC_008726.1 6225506 6226867 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3913 general substrate transporter; general substrate transporter 6225506..6226867 Mycobacterium vanbaalenii PYR-1 4643421 YP_956611.1 CDS Mvan_5840 NC_008726.1 6226907 6227338 D PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0126 hypothetical protein; hypothetical protein 6226907..6227338 Mycobacterium vanbaalenii PYR-1 4643422 YP_956612.1 CDS Mvan_5841 NC_008726.1 6227434 6229080 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_5299 ABC transporter related; ABC transporter--like protein complement(6227434..6229080) Mycobacterium vanbaalenii PYR-1 4643423 YP_956613.1 CDS Mvan_5842 NC_008726.1 6229090 6229656 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0833 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(6229090..6229656) Mycobacterium vanbaalenii PYR-1 4643424 YP_956614.1 CDS Mvan_5843 NC_008726.1 6229773 6230519 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0834 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6229773..6230519 Mycobacterium vanbaalenii PYR-1 4643425 YP_956615.1 CDS Mvan_5844 NC_008726.1 6230625 6231656 D PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_5324 MaoC-like dehydratase; dehydratase 6230625..6231656 Mycobacterium vanbaalenii PYR-1 4643426 YP_956616.1 CDS Mvan_5845 NC_008726.1 6231677 6232015 R PFAM: protein of unknown function DUF202; KEGG: mmc:Mmcs_5316 protein of unknown function DUF202; hypothetical protein complement(6231677..6232015) Mycobacterium vanbaalenii PYR-1 4643427 YP_956617.1 CDS Mvan_5846 NC_008726.1 6232017 6232370 R PFAM: protein of unknown function DUF202; KEGG: mmc:Mmcs_5317 protein of unknown function DUF202; hypothetical protein complement(6232017..6232370) Mycobacterium vanbaalenii PYR-1 4643428 YP_956618.1 CDS Mvan_5847 NC_008726.1 6232384 6233988 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: mmc:Mmcs_5333 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(6232384..6233988) Mycobacterium vanbaalenii PYR-1 4643429 YP_956619.1 CDS Mvan_5848 NC_008726.1 6234079 6234753 R PFAM: Helix-turn-helix, type 11 domain protein; KEGG: mpa:MAP2725c hypothetical protein; putative transcriptional regulator complement(6234079..6234753) Mycobacterium vanbaalenii PYR-1 4643430 YP_956620.1 CDS Mvan_5849 NC_008726.1 6234955 6235137 D KEGG: mmc:Mmcs_5292 FdxD; FdxD protein 6234955..6235137 Mycobacterium vanbaalenii PYR-1 4643431 YP_956621.1 CDS Mvan_5850 NC_008726.1 6235151 6235642 R PFAM: protein of unknown function DUF309; KEGG: mmc:Mmcs_3837 protein of unknown function DUF309; hypothetical protein complement(6235151..6235642) Mycobacterium vanbaalenii PYR-1 4643432 YP_956622.1 CDS Mvan_5851 NC_008726.1 6235713 6236519 D KEGG: mmc:Mmcs_1464 hypothetical protein; hypothetical protein 6235713..6236519 Mycobacterium vanbaalenii PYR-1 4643433 YP_956623.1 CDS Mvan_5852 NC_008726.1 6236549 6236791 R KEGG: mmc:Mmcs_1463 hypothetical protein; hypothetical protein complement(6236549..6236791) Mycobacterium vanbaalenii PYR-1 4643434 YP_956624.1 CDS Mvan_5853 NC_008726.1 6236880 6239183 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1461 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(6236880..6239183) Mycobacterium vanbaalenii PYR-1 4643435 YP_956625.1 CDS Mvan_5854 NC_008726.1 6239437 6240660 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_1448 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 6239437..6240660 Mycobacterium vanbaalenii PYR-1 4647374 YP_956626.1 CDS Mvan_5855 NC_008726.1 6240671 6241933 R PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1445 major facilitator superfamily MFS_1; major facilitator superfamily transporter complement(6240671..6241933) Mycobacterium vanbaalenii PYR-1 4647375 YP_956627.1 CDS Mvan_5856 NC_008726.1 6241930 6243036 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mmc:Mmcs_1444 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta complement(6241930..6243036) Mycobacterium vanbaalenii PYR-1 4647376 YP_956628.1 CDS Mvan_5857 NC_008726.1 6243141 6243557 R KEGG: mmc:Mmcs_1443 hypothetical protein; hypothetical protein complement(6243141..6243557) Mycobacterium vanbaalenii PYR-1 4647377 YP_956629.1 CDS Mvan_5858 NC_008726.1 6244006 6244662 D PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_5320 protein of unknown function DUF305; hypothetical protein 6244006..6244662 Mycobacterium vanbaalenii PYR-1 4647378 YP_956630.1 CDS Mvan_5859 NC_008726.1 6244750 6245574 R PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_5305 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(6244750..6245574) Mycobacterium vanbaalenii PYR-1 4647379 YP_956631.1 CDS Mvan_5860 NC_008726.1 6245650 6246234 D PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5306 transcriptional regulator, TetR family; TetR family transcriptional regulator 6245650..6246234 Mycobacterium vanbaalenii PYR-1 4647380 YP_956632.1 CDS Mvan_5861 NC_008726.1 6246236 6246994 R KEGG: mmc:Mmcs_5308 hypothetical protein; hypothetical protein complement(6246236..6246994) Mycobacterium vanbaalenii PYR-1 4647381 YP_956633.1 CDS Mvan_5862 NC_008726.1 6247188 6248465 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4098 major facilitator superfamily MFS_1; major facilitator superfamily transporter 6247188..6248465 Mycobacterium vanbaalenii PYR-1 4647382 YP_956634.1 CDS Mvan_5863 NC_008726.1 6248514 6251342 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: pol:Bpro_1191 ATPase, E1-E2 type; P-type HAD superfamily ATPase 6248514..6251342 Mycobacterium vanbaalenii PYR-1 4647383 YP_956635.1 CDS Mvan_5864 NC_008726.1 6251339 6252241 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rxy:Rxyl_2873 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 6251339..6252241 Mycobacterium vanbaalenii PYR-1 4647384 YP_956636.1 CDS Mvan_5865 NC_008726.1 6252465 6254000 D PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222; hypothetical protein 6252465..6254000 Mycobacterium vanbaalenii PYR-1 4647386 YP_956637.1 CDS Mvan_5866 NC_008726.1 6254020 6254202 R KEGG: nfa:nfa6120 hypothetical protein; hypothetical protein complement(6254020..6254202) Mycobacterium vanbaalenii PYR-1 4647387 YP_956638.1 CDS Mvan_5867 NC_008726.1 6254290 6255477 R KEGG: atc:AGR_C_279 conserved hypothetical protein; hypothetical protein complement(6254290..6255477) Mycobacterium vanbaalenii PYR-1 4647388 YP_956639.1 CDS Mvan_5868 NC_008726.1 6255462 6256121 R PFAM: ABC transporter related; KEGG: rpb:RPB_0292 heme exporter protein CcmA; ABC transporter--like protein complement(6255462..6256121) Mycobacterium vanbaalenii PYR-1 4647389 YP_956640.1 CDS Mvan_5869 NC_008726.1 6256118 6256993 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_2292 ABC phosphonate transport system ATPase; ABC transporter--like protein complement(6256118..6256993) Mycobacterium vanbaalenii PYR-1 4647390 YP_956641.1 CDS Mvan_5870 NC_008726.1 6256990 6257871 R PFAM: phosphonate metabolism PhnJ; KEGG: cyb:CYB_0165 phosphonate metabolism protein PhnJ; phosphonate metabolism PhnJ complement(6256990..6257871) Mycobacterium vanbaalenii PYR-1 4647391 YP_956642.1 CDS Mvan_5871 NC_008726.1 6257868 6258896 R KEGG: cyb:CYB_0164 phosphonate metabolism protein PhnI; phosphonate metabolism protein PhnI complement(6257868..6258896) Mycobacterium vanbaalenii PYR-1 4647392 YP_956643.1 CDS Mvan_5872 NC_008726.1 6258896 6259459 R KEGG: atc:AGR_C_302 PhnH protein; hypothetical protein complement(6258896..6259459) Mycobacterium vanbaalenii PYR-1 4647393 YP_956644.1 CDS Mvan_5873 NC_008726.1 6259456 6259872 R hypothetical protein complement(6259456..6259872) Mycobacterium vanbaalenii PYR-1 4647394 YP_956645.1 CDS Mvan_5874 NC_008726.1 6259869 6260606 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; Helix-turn-helix, type 11 domain protein; KEGG: bld:BLi04350 similar to transcriptional regulator (GntR family); RBL01565; UbiC transcription regulator-associated domain-containing protein complement(6259869..6260606) Mycobacterium vanbaalenii PYR-1 4647395 YP_956646.1 CDS Mvan_5875 NC_008726.1 6260603 6261436 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tbd:Tbd_2298 ABC phosphonate permease; phosphonate ABC transporter inner membrane subunit complement(6260603..6261436) Mycobacterium vanbaalenii PYR-1 4647396 YP_956647.1 CDS Mvan_5876 NC_008726.1 6261433 6262236 R KEGG: nfa:nfa35290 putative ABC transporter ATP-binding protein; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(6261433..6262236) Mycobacterium vanbaalenii PYR-1 4647397 YP_956648.1 CDS Mvan_5877 NC_008726.1 6262238 6263128 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ana:all8089 putative phosphonate transport system substrate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(6262238..6263128) Mycobacterium vanbaalenii PYR-1 4647398 YP_956649.1 CDS Mvan_5878 NC_008726.1 6263252 6265051 R PFAM: metallophosphoesterase; KEGG: syn:sll1064 hypothetical protein; metallophosphoesterase complement(6263252..6265051) Mycobacterium vanbaalenii PYR-1 4648136 YP_956650.1 CDS Mvan_5879 NC_008726.1 6265083 6265415 R PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_5288 hemerythrin HHE cation binding region; hemerythrin HHE cation binding domain-containing protein complement(6265083..6265415) Mycobacterium vanbaalenii PYR-1 4648137 YP_956651.1 CDS Mvan_5880 NC_008726.1 6265469 6266431 R PFAM: putative esterase; KEGG: mmc:Mmcs_2773 putative esterase; putative esterase complement(6265469..6266431) Mycobacterium vanbaalenii PYR-1 4648138 YP_956652.1 CDS Mvan_5881 NC_008726.1 6266467 6267060 R PFAM: regulatory protein, TetR; KEGG: tfu:Tfu_0465 hypothetical protein; TetR family transcriptional regulator complement(6266467..6267060) Mycobacterium vanbaalenii PYR-1 4648139 YP_956653.1 CDS Mvan_5882 NC_008726.1 6267134 6267955 D PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV1746 hydrolase; alpha/beta hydrolase fold protein 6267134..6267955 Mycobacterium vanbaalenii PYR-1 4648140 YP_956654.1 CDS Mvan_5883 NC_008726.1 6268051 6269049 R PFAM: Radical SAM domain protein; KEGG: mtc:MT1721 MoaA-related protein; radical SAM domain-containing protein complement(6268051..6269049) Mycobacterium vanbaalenii PYR-1 4648141 YP_956655.1 CDS Mvan_5884 NC_008726.1 6269043 6269864 R KEGG: mtc:MT1720 hypothetical protein; hypothetical protein complement(6269043..6269864) Mycobacterium vanbaalenii PYR-1 4648142 YP_956656.1 CDS Mvan_5885 NC_008726.1 6269879 6271006 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mbo:Mb1706 possible acyl-CoA dehydrogenase FadE16; acyl-CoA dehydrogenase domain-containing protein complement(6269879..6271006) Mycobacterium vanbaalenii PYR-1 4648143 YP_956657.1 CDS Mvan_5886 NC_008726.1 6271010 6271918 R KEGG: mtc:MT1718 hypothetical protein; hypothetical protein complement(6271010..6271918) Mycobacterium vanbaalenii PYR-1 4648144 YP_956658.1 CDS Mvan_5887 NC_008726.1 6272187 6273479 R KEGG: mmc:Mmcs_0851 hypothetical protein; hypothetical protein complement(6272187..6273479) Mycobacterium vanbaalenii PYR-1 4648145 YP_956659.1 CDS Mvan_5888 NC_008726.1 6273618 6274643 R KEGG: mmc:Mmcs_3725 hypothetical protein; hypothetical protein complement(6273618..6274643) Mycobacterium vanbaalenii PYR-1 4648146 YP_956660.1 CDS Mvan_5889 NC_008726.1 6274833 6275393 R PFAM: regulatory protein, TetR; KEGG: nfa:nfa29450 putative transcriptional regulator; TetR family transcriptional regulator complement(6274833..6275393) Mycobacterium vanbaalenii PYR-1 4648147 YP_956661.1 CDS Mvan_5890 NC_008726.1 6275457 6275924 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc02226 hypothetical protein; activator of Hsp90 ATPase 1 family protein complement(6275457..6275924) Mycobacterium vanbaalenii PYR-1 4648148 YP_956662.1 CDS Mvan_5891 NC_008726.1 6275927 6276256 R PFAM: regulatory protein, ArsR; KEGG: mlo:mll3772 transcriptional regulator; regulatory protein ArsR complement(6275927..6276256) Mycobacterium vanbaalenii PYR-1 4648149 YP_956663.1 CDS Mvan_5892 NC_008726.1 6276403 6277410 D PFAM: oxidoreductase, molybdopterin binding; KEGG: aor:AO090012000604 sulfite oxidase and related enzymes Pfam: Oxidored_molyb Mo-co_dimer; molybdopterin binding oxidoreductase 6276403..6277410 Mycobacterium vanbaalenii PYR-1 4648150 YP_956664.1 CDS Mvan_5893 NC_008726.1 6277401 6278642 D PFAM: Erythromycin esterase; KEGG: dra:DR2257 erythromycin esterase, putative; erythromycin esterase 6277401..6278642 Mycobacterium vanbaalenii PYR-1 4648151 YP_956665.1 CDS Mvan_5894 NC_008726.1 6278654 6280258 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_4938 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 6278654..6280258 Mycobacterium vanbaalenii PYR-1 4648152 YP_956666.1 CDS Mvan_5895 NC_008726.1 6280387 6281877 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_1715 beta-lactamase; beta-lactamase 6280387..6281877 Mycobacterium vanbaalenii PYR-1 4648153 YP_956667.1 CDS Mvan_5896 NC_008726.1 6282024 6282377 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP0136 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 6282024..6282377 Mycobacterium vanbaalenii PYR-1 4648154 YP_956668.1 CDS Mvan_5897 NC_008726.1 6282580 6284613 D KEGG: mmc:Mmcs_5342 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; SMART: DNA topoisomerase II; DNA topoisomerase 6282580..6284613 Mycobacterium vanbaalenii PYR-1 4648155 YP_956669.1 CDS Mvan_5898 NC_008726.1 6284634 6286778 D PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: mmc:Mmcs_5343 DNA gyrase/topoisomerase IV, subunit A; DNA gyrase/topoisomerase IV subunit A 6284634..6286778 Mycobacterium vanbaalenii PYR-1 4648156 YP_956670.1 CDS Mvan_5899 NC_008726.1 6286831 6287181 D PFAM: protein of unknown function DUF861, cupin_3; KEGG: mmc:Mmcs_0974 protein of unknown function DUF861, cupin_3; hypothetical protein 6286831..6287181 Mycobacterium vanbaalenii PYR-1 4648157 YP_956671.1 CDS Mvan_5900 NC_008726.1 6287178 6288626 R PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2310 integral membrane efflux protein; major facilitator superfamily transporter complement(6287178..6288626) Mycobacterium vanbaalenii PYR-1 4648158 YP_956672.1 CDS Mvan_5902 NC_008726.1 6290023 6290664 D PFAM: regulatory protein, TetR; KEGG: sco:SCO1193 TetR-family transcriptional regulator; TetR family transcriptional regulator 6290023..6290664 Mycobacterium vanbaalenii PYR-1 4648160 YP_956673.1 CDS Mvan_5903 NC_008726.1 6290722 6291159 R KEGG: mmc:Mmcs_5334 hypothetical protein; hypothetical protein complement(6290722..6291159) Mycobacterium vanbaalenii PYR-1 4647514 YP_956674.1 CDS Mvan_5904 NC_008726.1 6291191 6291670 R KEGG: mpa:MAP2671c glucose-6-phosphate 1-dehydrogenase; hypothetical protein complement(6291191..6291670) Mycobacterium vanbaalenii PYR-1 4647515 YP_956675.1 CDS Mvan_5905 NC_008726.1 6291741 6292175 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sma:SAV7242 putative thioredoxin; thioredoxin complement(6291741..6292175) Mycobacterium vanbaalenii PYR-1 4647516 YP_956676.1 CDS Mvan_5906 NC_008726.1 6292270 6292956 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sco:SCO4596 two-component system response regulator; two component LuxR family transcriptional regulator complement(6292270..6292956) Mycobacterium vanbaalenii PYR-1 4647517 YP_956677.1 CDS Mvan_5907 NC_008726.1 6292944 6294170 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sma:SAV3631 two-component system sensor kinase; integral membrane sensor signal transduction histidine kinase complement(6292944..6294170) Mycobacterium vanbaalenii PYR-1 4647518 YP_956678.1 CDS Mvan_5908 NC_008726.1 6294167 6295042 R PFAM: Abortive infection protein; KEGG: mmc:Mmcs_3338 abortive infection protein; abortive infection protein complement(6294167..6295042) Mycobacterium vanbaalenii PYR-1 4647519 YP_956679.1 CDS Mvan_5909 NC_008726.1 6295298 6296446 D KEGG: mmc:Mmcs_4038 hypothetical protein; hypothetical protein 6295298..6296446 Mycobacterium vanbaalenii PYR-1 4647520 YP_956680.1 CDS Mvan_5910 NC_008726.1 6296443 6297159 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_5327 GntR-like protein; GntR family transcriptional regulator complement(6296443..6297159) Mycobacterium vanbaalenii PYR-1 4647521 YP_956681.1 CDS Mvan_5911 NC_008726.1 6297282 6297791 D KEGG: mmc:Mmcs_5328 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase 6297282..6297791 Mycobacterium vanbaalenii PYR-1 4647522 YP_956682.1 CDS Mvan_5912 NC_008726.1 6297831 6299255 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: mmc:Mmcs_5329 gluconate transporter; gluconate transporter 6297831..6299255 Mycobacterium vanbaalenii PYR-1 4647523 YP_956683.1 CDS Mvan_5913 NC_008726.1 6299263 6302454 R TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: sde:Sde_2311 hypothetical protein; putative outer membrane adhesin-like protein complement(6299263..6302454) Mycobacterium vanbaalenii PYR-1 4647524 YP_956684.1 CDS Mvan_5914 NC_008726.1 6302612 6303811 D TIGRFAM: lycopene cyclase family protein; PFAM: Lycopene beta and epsilon cyclase; KEGG: nfa:nfa34900 putative lycopene cyclase; lycopene cyclase family protein 6302612..6303811 Mycobacterium vanbaalenii PYR-1 4647525 YP_956685.1 CDS Mvan_5916 NC_008726.1 6304415 6305347 D PFAM: beta-lactamase; KEGG: mmc:Mmcs_5336 putative conserved alanine rich lipoprotein LppW; beta-lactamase 6304415..6305347 Mycobacterium vanbaalenii PYR-1 4647527 YP_956686.1 CDS Mvan_5917 NC_008726.1 6305358 6305978 R PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5338 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(6305358..6305978) Mycobacterium vanbaalenii PYR-1 4647528 YP_956687.1 CDS Mvan_5918 NC_008726.1 6306179 6306973 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_5339 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 6306179..6306973 Mycobacterium vanbaalenii PYR-1 4647529 YP_956688.1 CDS Mvan_5919 NC_008726.1 6307794 6309398 D KEGG: bpm:BURPS1710b_A0608 kumamolisin; kumamolisin 6307794..6309398 Mycobacterium vanbaalenii PYR-1 4647530 YP_956689.1 CDS Mvan_5920 NC_008726.1 6309462 6311381 D hypothetical protein 6309462..6311381 Mycobacterium vanbaalenii PYR-1 4647531 YP_956690.1 CDS Mvan_5921 NC_008726.1 6311438 6312139 D PFAM: regulatory protein, TetR; KEGG: ava:Ava_C0100 transcriptional regulator, TetR family; TetR family transcriptional regulator 6311438..6312139 Mycobacterium vanbaalenii PYR-1 4647532 YP_956691.1 CDS Mvan_5922 NC_008726.1 6312264 6314144 D PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: atc:AGR_pAT_267 hypothetical protein; peptidase S9 prolyl oligopeptidase 6312264..6314144 Mycobacterium vanbaalenii PYR-1 4647533 YP_956692.1 CDS Mvan_5923 NC_008726.1 6314299 6315060 D KEGG: mmc:Mmcs_5354 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 6314299..6315060 Mycobacterium vanbaalenii PYR-1 4647534 YP_956693.1 CDS Mvan_5924 NC_008726.1 6315077 6316189 R KEGG: mmc:Mmcs_5355 hypothetical protein; hypothetical protein complement(6315077..6316189) Mycobacterium vanbaalenii PYR-1 4647535 YP_956694.1 CDS Mvan_5925 NC_008726.1 6316311 6319304 R PFAM: WD40 domain protein beta Propeller; KEGG: mmc:Mmcs_5378 hypothetical protein; WD40 domain-containing protein complement(6316311..6319304) Mycobacterium vanbaalenii PYR-1 4647536 YP_956695.1 CDS Mvan_5926 NC_008726.1 6319730 6321028 D PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa33380 putative transporter; major facilitator superfamily transporter 6319730..6321028 Mycobacterium vanbaalenii PYR-1 4647537 YP_956696.1 CDS Mvan_5927 NC_008726.1 6321104 6322027 R PFAM: fatty acid desaturase, type 2; KEGG: nfa:nfa6080 putative fatty acid desaturase; fatty acid desaturase, type 2 complement(6321104..6322027) Mycobacterium vanbaalenii PYR-1 4647538 YP_956697.1 CDS Mvan_5928 NC_008726.1 6322166 6325423 R PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_4; KEGG: mbo:Mb2515c probable transcriptional regulatory protein (LuxR-family); regulatory protein LuxR complement(6322166..6325423) Mycobacterium vanbaalenii PYR-1 4647539 YP_956698.1 CDS Mvan_5929 NC_008726.1 6325633 6327009 D KEGG: mpa:MAP0481c hypothetical protein; hypothetical protein 6325633..6327009 Mycobacterium vanbaalenii PYR-1 4644916 YP_956699.1 CDS Mvan_5930 NC_008726.1 6327299 6327976 R hypothetical protein complement(6327299..6327976) Mycobacterium vanbaalenii PYR-1 4644917 YP_956700.1 CDS Mvan_5931 NC_008726.1 6328066 6329331 D KEGG: sal:Sala_1251 integrase, catalytic region; transposase 6328066..6329331 Mycobacterium vanbaalenii PYR-1 4644918 YP_956701.1 CDS Mvan_5932 NC_008726.1 6329431 6329868 D KEGG: chy:CHY_1116 ISChy4, transposition helper protein; hypothetical protein 6329431..6329868 Mycobacterium vanbaalenii PYR-1 4644919 YP_956702.1 CDS Mvan_5933 NC_008726.1 6329848 6330291 R KEGG: Tn554-related, transposase C; Tn554-related, transposase C complement(6329848..6330291) Mycobacterium vanbaalenii PYR-1 4644920 YP_956703.1 CDS Mvan_5934 NC_008726.1 6330288 6332462 R PFAM: phage integrase family protein; KEGG: mmc:Mmcs_5578 phage integrase; phage integrase family protein complement(6330288..6332462) Mycobacterium vanbaalenii PYR-1 4644921 YP_956704.1 CDS Mvan_5935 NC_008726.1 6332459 6333640 R PFAM: phage integrase family protein; KEGG: fra:Francci3_3734 phage integrase-like SAM-like; phage integrase family protein complement(6332459..6333640) Mycobacterium vanbaalenii PYR-1 4644922 YP_956705.1 CDS Mvan_5937 NC_008726.1 6334046 6335035 R PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sus:Acid_3312 phage integrase family protein; phage integrase family protein complement(6334046..6335035) Mycobacterium vanbaalenii PYR-1 4644924 YP_956706.1 CDS Mvan_5938 NC_008726.1 6335032 6335964 R PFAM: phage integrase family protein; KEGG: mlo:mll6043 integrase/recombinase; phage integrase family protein complement(6335032..6335964) Mycobacterium vanbaalenii PYR-1 4644925 YP_956707.1 CDS Mvan_5939 NC_008726.1 6335961 6337148 R PFAM: phage integrase family protein; KEGG: eba:p2A229 putative integrase; phage integrase family protein complement(6335961..6337148) Mycobacterium vanbaalenii PYR-1 4644926 YP_956708.1 CDS Mvan_5941 NC_008726.1 6337524 6339158 R PFAM: phage integrase family protein; KEGG: rha:RHA1_ro08303 hypothetical protein; phage integrase family protein complement(6337524..6339158) Mycobacterium vanbaalenii PYR-1 4644928 YP_956709.1 CDS Mvan_5942 NC_008726.1 6339192 6339506 R KEGG: mmc:Mmcs_2599 hypothetical protein; hypothetical protein complement(6339192..6339506) Mycobacterium vanbaalenii PYR-1 4644929 YP_956710.1 CDS Mvan_5943 NC_008726.1 6339503 6340570 R PFAM: phage integrase family protein; KEGG: nfa:pnf2830 putative recombinase; phage integrase family protein complement(6339503..6340570) Mycobacterium vanbaalenii PYR-1 4644930 YP_956711.1 CDS Mvan_5946 NC_008726.1 6341351 6341644 R hypothetical protein complement(6341351..6341644) Mycobacterium vanbaalenii PYR-1 4644933 YP_956712.1 CDS Mvan_5947 NC_008726.1 6341778 6342764 R hypothetical protein complement(6341778..6342764) Mycobacterium vanbaalenii PYR-1 4644934 YP_956713.1 CDS Mvan_5948 NC_008726.1 6342774 6343097 R hypothetical protein complement(6342774..6343097) Mycobacterium vanbaalenii PYR-1 4644935 YP_956714.1 CDS Mvan_5949 NC_008726.1 6343419 6343679 D hypothetical protein 6343419..6343679 Mycobacterium vanbaalenii PYR-1 4644936 YP_956715.1 CDS Mvan_5950 NC_008726.1 6345010 6348384 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: fra:Francci3_1475 cell divisionFtsK/SpoIIIE; cell division protein FtsK complement(6345010..6348384) Mycobacterium vanbaalenii PYR-1 4644937 YP_956716.1 CDS Mvan_5951 NC_008726.1 6348495 6349061 R PFAM: CHAP domain containing protein; KEGG: cvi:CV2571 LasA protease precursor; CHAP domain-containing protein complement(6348495..6349061) Mycobacterium vanbaalenii PYR-1 4644938 YP_956717.1 CDS Mvan_5952 NC_008726.1 6349246 6350106 R hypothetical protein complement(6349246..6350106) Mycobacterium vanbaalenii PYR-1 4644939 YP_956718.1 CDS Mvan_5953 NC_008726.1 6350099 6352354 R KEGG: sil:SPO1224 hypothetical protein; hypothetical protein complement(6350099..6352354) Mycobacterium vanbaalenii PYR-1 4644940 YP_956719.1 CDS Mvan_5954 NC_008726.1 6352596 6353264 D KEGG: cef:CE0046 hypothetical protein; hypothetical protein 6352596..6353264 Mycobacterium vanbaalenii PYR-1 4644941 YP_956720.1 CDS Mvan_5955 NC_008726.1 6353405 6353776 R hypothetical protein complement(6353405..6353776) Mycobacterium vanbaalenii PYR-1 4643657 YP_956721.1 CDS Mvan_5957 NC_008726.1 6356366 6358084 R hypothetical protein complement(6356366..6358084) Mycobacterium vanbaalenii PYR-1 4643659 YP_956722.1 CDS Mvan_5958 NC_008726.1 6358190 6359401 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mpa:MAP2050 IS1601_B_2 transposase; transposase, IS111A/IS1328/IS1533 complement(6358190..6359401) Mycobacterium vanbaalenii PYR-1 4643660 YP_956723.1 CDS Mvan_5959 NC_008726.1 6360079 6360936 R PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5589 integrase, catalytic region; integrase catalytic subunit complement(6360079..6360936) Mycobacterium vanbaalenii PYR-1 4643661 YP_956724.1 CDS Mvan_5960 NC_008726.1 6360933 6361241 R PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3179 transposase IS3/IS911; transposase IS3/IS911 family protein complement(6360933..6361241) Mycobacterium vanbaalenii PYR-1 4643662 YP_956725.1 CDS Mvan_5961 NC_008726.1 6361297 6361608 R hypothetical protein complement(6361297..6361608) Mycobacterium vanbaalenii PYR-1 4643663 YP_956726.1 CDS Mvan_5962 NC_008726.1 6362015 6362398 D hypothetical protein 6362015..6362398 Mycobacterium vanbaalenii PYR-1 4643664 YP_956727.1 CDS Mvan_5963 NC_008726.1 6362521 6363459 R hypothetical protein complement(6362521..6363459) Mycobacterium vanbaalenii PYR-1 4643665 YP_956728.1 CDS Mvan_5964 NC_008726.1 6363459 6363818 R hypothetical protein complement(6363459..6363818) Mycobacterium vanbaalenii PYR-1 4643666 YP_956729.1 CDS Mvan_5965 NC_008726.1 6363887 6365209 R PFAM: Integrase, catalytic region; KEGG: nwi:Nwi_3099 helix-turn-helix, fis-type; integrase catalytic subunit complement(6363887..6365209) Mycobacterium vanbaalenii PYR-1 4643667 YP_956730.1 CDS Mvan_5966 NC_008726.1 6365569 6365958 D hypothetical protein 6365569..6365958 Mycobacterium vanbaalenii PYR-1 4643668 YP_956731.1 CDS Mvan_5967 NC_008726.1 6366202 6366543 D PFAM: regulatory protein, LuxR; KEGG: nfa:nfa28740 putative two-component system response regulator; response regulator receiver protein 6366202..6366543 Mycobacterium vanbaalenii PYR-1 4643669 YP_956732.1 CDS Mvan_5969 NC_008726.1 6368258 6368605 R PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_3179 transposase IS3/IS911; transposase IS3/IS911 family protein complement(6368258..6368605) Mycobacterium vanbaalenii PYR-1 4643671 YP_956733.1 CDS Mvan_5970 NC_008726.1 6368923 6369534 R hypothetical protein complement(6368923..6369534) Mycobacterium vanbaalenii PYR-1 4643672 YP_956734.1 CDS Mvan_5971 NC_008726.1 6369550 6370041 R hypothetical protein complement(6369550..6370041) Mycobacterium vanbaalenii PYR-1 4643673 YP_956735.1 CDS Mvan_5972 NC_008726.1 6370443 6370787 D PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_2593 transposase IS3/IS911; transposase IS3/IS911 family protein 6370443..6370787 Mycobacterium vanbaalenii PYR-1 4643674 YP_956736.1 CDS Mvan_5973 NC_008726.1 6370865 6371524 D PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2594 integrase, catalytic region; integrase catalytic subunit 6370865..6371524 Mycobacterium vanbaalenii PYR-1 4643675 YP_956737.1 CDS Mvan_5974 NC_008726.1 6371568 6372842 D PFAM: transposase, mutator type; KEGG: mbo:Mb0944c putative transposase; transposase, mutator type 6371568..6372842 Mycobacterium vanbaalenii PYR-1 4643676 YP_956738.1 CDS Mvan_5976 NC_008726.1 6373855 6374148 R hypothetical protein complement(6373855..6374148) Mycobacterium vanbaalenii PYR-1 4643678 YP_956739.1 CDS Mvan_5977 NC_008726.1 6374280 6375215 R hypothetical protein complement(6374280..6375215) Mycobacterium vanbaalenii PYR-1 4643679 YP_956740.1 CDS Mvan_5978 NC_008726.1 6375276 6375599 R hypothetical protein complement(6375276..6375599) Mycobacterium vanbaalenii PYR-1 4643680 YP_956741.1 CDS Mvan_5979 NC_008726.1 6375812 6376567 R PFAM: CHAP domain containing protein; SH3, type 3 domain protein; KEGG: cvi:CV2571 LasA protease precursor; CHAP domain-containing protein complement(6375812..6376567) Mycobacterium vanbaalenii PYR-1 4643681 YP_956742.1 CDS Mvan_5980 NC_008726.1 6376564 6377424 R hypothetical protein complement(6376564..6377424) Mycobacterium vanbaalenii PYR-1 4643682 YP_956743.1 CDS Mvan_5981 NC_008726.1 6377426 6379669 R KEGG: hch:HCH_06379 hypothetical protein; hypothetical protein complement(6377426..6379669) Mycobacterium vanbaalenii PYR-1 4646272 YP_956744.1 CDS Mvan_5982 NC_008726.1 6379847 6380374 D KEGG: cef:CE0046 hypothetical protein; hypothetical protein 6379847..6380374 Mycobacterium vanbaalenii PYR-1 4646273 YP_956745.1 CDS Mvan_5983 NC_008726.1 6380678 6381205 R hypothetical protein complement(6380678..6381205) Mycobacterium vanbaalenii PYR-1 4646274 YP_956746.1 CDS Mvan_5984 NC_008726.1 6381190 6381519 R hypothetical protein complement(6381190..6381519) Mycobacterium vanbaalenii PYR-1 4646275 YP_956747.1 CDS Mvan_5985 NC_008726.1 6381519 6381959 R hypothetical protein complement(6381519..6381959) Mycobacterium vanbaalenii PYR-1 4646276 YP_956748.1 CDS Mvan_5986 NC_008726.1 6382394 6383272 R hypothetical protein complement(6382394..6383272) Mycobacterium vanbaalenii PYR-1 4646277 YP_956749.1 CDS Mvan_5987 NC_008726.1 6383334 6384080 R PFAM: von Willebrand factor, type A; KEGG: tel:tlr0974 hypothetical protein; von Willebrand factor, type A complement(6383334..6384080) Mycobacterium vanbaalenii PYR-1 4646278 YP_956750.1 CDS Mvan_5988 NC_008726.1 6384142 6385569 R KEGG: plt:Plut_1597 hypothetical protein; hypothetical protein complement(6384142..6385569) Mycobacterium vanbaalenii PYR-1 4646279 YP_956751.1 CDS Mvan_5989 NC_008726.1 6385605 6387095 R Mn2+-dependent serine/threonine protein kinase complement(6385605..6387095) Mycobacterium vanbaalenii PYR-1 4646280 YP_956752.1 CDS Mvan_5990 NC_008726.1 6387095 6387958 R KEGG: rsp:RSP_3492 protein phosphatase 2C-like; hypothetical protein complement(6387095..6387958) Mycobacterium vanbaalenii PYR-1 4646281 YP_956753.1 CDS Mvan_5991 NC_008726.1 6388032 6389780 R PFAM: Dual specificity protein phosphatase; KEGG: rno:503171 similar to Mucin 2 precursor (Intestinal mucin 2) (predicted); dual specificity protein phosphatase complement(6388032..6389780) Mycobacterium vanbaalenii PYR-1 4646282 YP_956754.1 CDS Mvan_5992 NC_008726.1 6389861 6390463 R hypothetical protein complement(6389861..6390463) Mycobacterium vanbaalenii PYR-1 4646283 YP_956755.1 CDS Mvan_5993 NC_008726.1 6390465 6392225 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_2929 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(6390465..6392225) Mycobacterium vanbaalenii PYR-1 4646284 YP_956756.1 CDS Mvan_5994 NC_008726.1 6392349 6393260 D hypothetical protein 6392349..6393260 Mycobacterium vanbaalenii PYR-1 4646285 YP_956757.1 CDS Mvan_5996 NC_008726.1 6393985 6395094 D KEGG: sco:SCO6529 ATP/GTP binding protein; hypothetical protein 6393985..6395094 Mycobacterium vanbaalenii PYR-1 4646287 YP_956758.1 CDS Mvan_5997 NC_008726.1 6395095 6396324 D KEGG: sco:SCO6530 hypothetical protein; hypothetical protein 6395095..6396324 Mycobacterium vanbaalenii PYR-1 4646288 YP_956759.1 CDS Mvan_5998 NC_008726.1 6396585 6397553 R hypothetical protein complement(6396585..6397553) Mycobacterium vanbaalenii PYR-1 4646289 YP_956760.1 CDS Mvan_5999 NC_008726.1 6397555 6398211 R PFAM: nitroreductase; KEGG: mpa:MAP4096 hypothetical protein; nitroreductase complement(6397555..6398211) Mycobacterium vanbaalenii PYR-1 4646290 YP_956761.1 CDS Mvan_6000 NC_008726.1 6398338 6399480 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: plu:plu0935 hypothetical protein; radical SAM domain-containing protein 6398338..6399480 Mycobacterium vanbaalenii PYR-1 4646291 YP_956762.1 CDS Mvan_6001 NC_008726.1 6399481 6400353 D PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: afu:AF0106 aspartate carbamoyltransferase catalytic chain; aspartate/ornithine carbamoyltransferase carbamoyl phosphate-binding subunit 6399481..6400353 Mycobacterium vanbaalenii PYR-1 4646292 YP_956763.1 CDS Mvan_6002 NC_008726.1 6400338 6401108 R hypothetical protein complement(6400338..6401108) Mycobacterium vanbaalenii PYR-1 4646293 YP_956764.1 CDS Mvan_6003 NC_008726.1 6401105 6403741 R hypothetical protein complement(6401105..6403741) Mycobacterium vanbaalenii PYR-1 4646294 YP_956765.1 CDS Mvan_6004 NC_008726.1 6403738 6405798 R hypothetical protein complement(6403738..6405798) Mycobacterium vanbaalenii PYR-1 4646295 YP_956766.1 CDS Mvan_6005 NC_008726.1 6405802 6407145 R PFAM: protein of unknown function DUF201; hypothetical protein complement(6405802..6407145) Mycobacterium vanbaalenii PYR-1 4646296 YP_956767.1 CDS Mvan_6006 NC_008726.1 6407171 6409003 R hypothetical protein complement(6407171..6409003) Mycobacterium vanbaalenii PYR-1 4643932 YP_956768.1 CDS Mvan_6007 NC_008726.1 6409099 6410928 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ade:Adeh_2705 response regulator receiver; hypothetical protein 6409099..6410928 Mycobacterium vanbaalenii PYR-1 4643933 YP_956769.1 CDS Mvan_6008 NC_008726.1 6411301 6412689 D hypothetical protein 6411301..6412689 Mycobacterium vanbaalenii PYR-1 4643934 YP_956770.1 CDS Mvan_6009 NC_008726.1 6412686 6414125 D hypothetical protein 6412686..6414125 Mycobacterium vanbaalenii PYR-1 4643935 YP_956771.1 CDS Mvan_6010 NC_008726.1 6414167 6415279 R hypothetical protein complement(6414167..6415279) Mycobacterium vanbaalenii PYR-1 4643936 YP_956772.1 CDS Mvan_6011 NC_008726.1 6415355 6416575 D KEGG: nfa:nfa55370 hypothetical protein; hypothetical protein 6415355..6416575 Mycobacterium vanbaalenii PYR-1 4643937 YP_956773.1 CDS Mvan_6012 NC_008726.1 6417156 6418406 R ECF subfamily RNA polymerase sigma-24 factor complement(6417156..6418406) Mycobacterium vanbaalenii PYR-1 4643938 YP_956774.1 CDS Mvan_6013 NC_008726.1 6418578 6419456 R hypothetical protein complement(6418578..6419456) Mycobacterium vanbaalenii PYR-1 4643939 YP_956775.1 CDS Mvan_6014 NC_008726.1 6419461 6420474 R hypothetical protein complement(6419461..6420474) Mycobacterium vanbaalenii PYR-1 4643940 YP_956776.1 CDS Mvan_6015 NC_008726.1 6420471 6421919 R hypothetical protein complement(6420471..6421919) Mycobacterium vanbaalenii PYR-1 4643941 YP_956777.1 CDS Mvan_6016 NC_008726.1 6421995 6422657 R KEGG: nfa:nfa37960 hypothetical protein; hypothetical protein complement(6421995..6422657) Mycobacterium vanbaalenii PYR-1 4643942 YP_956778.1 CDS Mvan_6017 NC_008726.1 6422659 6423150 R hypothetical protein complement(6422659..6423150) Mycobacterium vanbaalenii PYR-1 4643943 YP_956779.1 CDS Mvan_6019 NC_008726.1 6424955 6425761 R PFAM: HpcH/HpaI aldolase; KEGG: bbr:BB1049 putative aldolase; HpcH/HpaI aldolase complement(6424955..6425761) Mycobacterium vanbaalenii PYR-1 4643945 YP_956780.1 CDS Mvan_6020 NC_008726.1 6425936 6427267 D KEGG: bxe:Bxe_A1381 putative xenobiotic compound monooxygenase, DszA family, A subunit; xenobiotic compound DszA family monooxygenase 6425936..6427267 Mycobacterium vanbaalenii PYR-1 4643946 YP_956781.1 CDS Mvan_6021 NC_008726.1 6427326 6428369 D PFAM: extracellular solute-binding protein, family 1; KEGG: tfu:Tfu_1309 putative transporter; extracellular solute-binding protein 6427326..6428369 Mycobacterium vanbaalenii PYR-1 4643947 YP_956782.1 CDS Mvan_6022 NC_008726.1 6428388 6430064 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB homolog; binding-protein-dependent transport system inner membrane protein 6428388..6430064 Mycobacterium vanbaalenii PYR-1 4643948 YP_956783.1 CDS Mvan_6023 NC_008726.1 6430092 6431195 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0112 spermidine/putrescine ABC transporter, ATP-binding protein; ABC transporter--like protein 6430092..6431195 Mycobacterium vanbaalenii PYR-1 4643949 YP_956784.1 CDS Mvan_6024 NC_008726.1 6431217 6431948 R KEGG: ava:Ava_3918 hypothetical protein; hypothetical protein complement(6431217..6431948) Mycobacterium vanbaalenii PYR-1 4643950 YP_956785.1 CDS Mvan_6025 NC_008726.1 6431952 6434165 R PFAM: UvrD/REP helicase; KEGG: pac:PPA1616 UvrD/Rep helicase; UvrD/REP helicase complement(6431952..6434165) Mycobacterium vanbaalenii PYR-1 4643951 YP_956786.1 CDS Mvan_6026 NC_008726.1 6434166 6434612 R hypothetical protein complement(6434166..6434612) Mycobacterium vanbaalenii PYR-1 4643952 YP_956787.1 CDS Mvan_6027 NC_008726.1 6434650 6435426 D hypothetical protein 6434650..6435426 Mycobacterium vanbaalenii PYR-1 4643953 YP_956788.1 CDS Mvan_6028 NC_008726.1 6435470 6435892 D hypothetical protein 6435470..6435892 Mycobacterium vanbaalenii PYR-1 4643954 YP_956789.1 CDS Mvan_6030 NC_008726.1 6436806 6439397 R PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: mpa:MAP0071 replicative DNA helicase; DnaB domain-containing protein complement(6436806..6439397) Mycobacterium vanbaalenii PYR-1 4643956 YP_956790.1 CDS rplI NC_008726.1 6439918 6440373 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(6439918..6440373) Mycobacterium vanbaalenii PYR-1 4643957 YP_956791.1 CDS rpsR NC_008726.1 6440385 6440648 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(6440385..6440648) Mycobacterium vanbaalenii PYR-1 4644008 YP_956792.1 CDS Mvan_6033 NC_008726.1 6440689 6441201 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(6440689..6441201) Mycobacterium vanbaalenii PYR-1 4644009 YP_956793.1 CDS rpsF NC_008726.1 6441266 6441556 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(6441266..6441556) Mycobacterium vanbaalenii PYR-1 4644010 YP_956794.1 CDS Mvan_6035 NC_008726.1 6441640 6443325 R KEGG: mmc:Mmcs_5371 hypothetical protein; hypothetical protein complement(6441640..6443325) Mycobacterium vanbaalenii PYR-1 4644011 YP_956795.1 CDS Mvan_6036 NC_008726.1 6443322 6445814 R PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: mmc:Mmcs_5372 glycosyl transferase, family 51; glycosyl transferase family protein complement(6443322..6445814) Mycobacterium vanbaalenii PYR-1 4644012 YP_956796.1 CDS Mvan_6037 NC_008726.1 6445876 6446310 R KEGG: mmc:Mmcs_5373 hypothetical protein; hypothetical protein complement(6445876..6446310) Mycobacterium vanbaalenii PYR-1 4644013 YP_956797.1 CDS Mvan_6038 NC_008726.1 6446445 6447329 D PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_5374 protein of unknown function DUF1707; hypothetical protein 6446445..6447329 Mycobacterium vanbaalenii PYR-1 4644014 YP_956798.1 CDS Mvan_6039 NC_008726.1 6447446 6447991 D PFAM: transcriptional regulator PadR family protein; KEGG: mmc:Mmcs_5375 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 6447446..6447991 Mycobacterium vanbaalenii PYR-1 4644015 YP_956799.1 CDS Mvan_6040 NC_008726.1 6448054 6449142 D PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: mmc:Mmcs_5376 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase 6448054..6449142 Mycobacterium vanbaalenii PYR-1 4644016 YP_956800.1 CDS Mvan_6041 NC_008726.1 6449226 6450365 R KEGG: mmc:Mmcs_2701 hypothetical protein; hypothetical protein complement(6449226..6450365) Mycobacterium vanbaalenii PYR-1 4644017 YP_956801.1 CDS Mvan_6042 NC_008726.1 6450491 6451387 D PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_5377 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 6450491..6451387 Mycobacterium vanbaalenii PYR-1 4644018 YP_956802.1 CDS Mvan_6043 NC_008726.1 6451443 6453248 R KEGG: mmc:Mmcs_5378 hypothetical protein; hypothetical protein complement(6451443..6453248) Mycobacterium vanbaalenii PYR-1 4644019 YP_956803.1 CDS Mvan_6044 NC_008726.1 6453473 6455548 D PFAM: protein of unknown function DUF839; KEGG: mmc:Mmcs_5379 twin-arginine translocation pathway signal; hypothetical protein 6453473..6455548 Mycobacterium vanbaalenii PYR-1 4644020 YP_956804.1 CDS Mvan_6045 NC_008726.1 6455558 6456355 D KEGG: mpa:MAP0054c hypothetical protein; hypothetical protein 6455558..6456355 Mycobacterium vanbaalenii PYR-1 4644021 YP_956805.1 CDS Mvan_6046 NC_008726.1 6456408 6457073 D PFAM: regulatory protein GntR, HTH; KEGG: mbo:Mb0044c probable transcriptional regulatory protein (probably GntR-family); regulatory protein GntR 6456408..6457073 Mycobacterium vanbaalenii PYR-1 4644022 YP_956806.1 CDS Mvan_6047 NC_008726.1 6457119 6458915 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_5383 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 6457119..6458915 Mycobacterium vanbaalenii PYR-1 4644023 YP_956807.1 CDS Mvan_6048 NC_008726.1 6458915 6459646 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_5384 ABC transporter related; ABC transporter--like protein 6458915..6459646 Mycobacterium vanbaalenii PYR-1 4644024 YP_956808.1 CDS Mvan_6049 NC_008726.1 6459723 6460163 D PFAM: regulatory protein, MarR; Penicillinase repressor; KEGG: mmc:Mmcs_5385 transcriptional regulator, MarR family; MarR family transcriptional regulator 6459723..6460163 Mycobacterium vanbaalenii PYR-1 4644025 YP_956809.1 CDS Mvan_6050 NC_008726.1 6460168 6461508 R KEGG: mmc:Mmcs_5386 hypothetical protein; hypothetical protein complement(6460168..6461508) Mycobacterium vanbaalenii PYR-1 4644026 YP_956810.1 CDS Mvan_6051 NC_008726.1 6461565 6462230 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_5387 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 6461565..6462230 Mycobacterium vanbaalenii PYR-1 4644027 YP_956811.1 CDS Mvan_6052 NC_008726.1 6462356 6463570 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sth:STH305 transposase; transposase IS116/IS110/IS902 family protein 6462356..6463570 Mycobacterium vanbaalenii PYR-1 4644028 YP_956812.1 CDS leuS NC_008726.1 6464902 6467808 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(6464902..6467808) Mycobacterium vanbaalenii PYR-1 4644030 YP_956813.1 CDS Mvan_6055 NC_008726.1 6467984 6468946 D KEGG: mmc:Mmcs_5390 hypothetical protein; hypothetical protein 6467984..6468946 Mycobacterium vanbaalenii PYR-1 4644031 YP_956814.1 CDS Mvan_6056 NC_008726.1 6469021 6469392 D KEGG: mmc:Mmcs_5391 hypothetical protein; hypothetical protein 6469021..6469392 Mycobacterium vanbaalenii PYR-1 4644032 YP_956815.1 CDS Mvan_6057 NC_008726.1 6469407 6470012 R PFAM: protein of unknown function DUF179; KEGG: mmc:Mmcs_5392 protein of unknown function DUF179; hypothetical protein complement(6469407..6470012) Mycobacterium vanbaalenii PYR-1 4644033 YP_956816.1 CDS Mvan_6058 NC_008726.1 6470162 6471445 D PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_5393 putative conserved integral membrane protein; major facilitator superfamily transporter 6470162..6471445 Mycobacterium vanbaalenii PYR-1 4643288 YP_956817.1 CDS Mvan_6059 NC_008726.1 6471455 6472231 D KEGG: mmc:Mmcs_5394 hypothetical protein; hypothetical protein 6471455..6472231 Mycobacterium vanbaalenii PYR-1 4643289 YP_956818.1 CDS Mvan_6060 NC_008726.1 6472250 6472747 R KEGG: mmc:Mmcs_5396 hypothetical protein; hypothetical protein complement(6472250..6472747) Mycobacterium vanbaalenii PYR-1 4643290 YP_956819.1 CDS Mvan_6061 NC_008726.1 6472754 6474205 R KEGG: mpa:MAP4332c poly(A) polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(6472754..6474205) Mycobacterium vanbaalenii PYR-1 4643291 YP_956820.1 CDS Mvan_6062 NC_008726.1 6474270 6475076 D PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_5398 NUDIX hydrolase; NUDIX hydrolase 6474270..6475076 Mycobacterium vanbaalenii PYR-1 4643292 YP_956821.1 CDS Mvan_6063 NC_008726.1 6475073 6477508 D KEGG: mmc:Mmcs_5399 hypothetical protein; hypothetical protein 6475073..6477508 Mycobacterium vanbaalenii PYR-1 4643293 YP_956822.1 CDS Mvan_6064 NC_008726.1 6477501 6481175 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mmc:Mmcs_5400 integral membrane protein MviN; integral membrane protein MviN 6477501..6481175 Mycobacterium vanbaalenii PYR-1 4643294 YP_956823.1 CDS Mvan_6065 NC_008726.1 6481234 6481809 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_5401 RNA polymerase, sigma-24 subunit, ECF subfamily; Fis family transcriptional regulator 6481234..6481809 Mycobacterium vanbaalenii PYR-1 4643295 YP_956824.1 CDS Mvan_6066 NC_008726.1 6481864 6482496 D KEGG: mpa:MAP4338 hypothetical protein; hypothetical protein 6481864..6482496 Mycobacterium vanbaalenii PYR-1 4643296 YP_956825.1 CDS Mvan_6067 NC_008726.1 6482621 6483616 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5402 thioredoxin reductase; thioredoxin reductase 6482621..6483616 Mycobacterium vanbaalenii PYR-1 4643297 YP_956826.1 CDS Mvan_6068 NC_008726.1 6483613 6483945 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_5403 thioredoxin; thioredoxin 6483613..6483945 Mycobacterium vanbaalenii PYR-1 4643298 YP_956827.1 CDS Mvan_6069 NC_008726.1 6484029 6485216 D PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase/autolysin; KEGG: mmc:Mmcs_5404 peptidoglycan-binding domain 1; peptidoglycan binding domain-containing protein 6484029..6485216 Mycobacterium vanbaalenii PYR-1 4643299 YP_956828.1 CDS Mvan_6070 NC_008726.1 6485226 6485966 R KEGG: mmc:Mmcs_5405 hypothetical protein; hypothetical protein complement(6485226..6485966) Mycobacterium vanbaalenii PYR-1 4643300 YP_956829.1 CDS Mvan_6071 NC_008726.1 6486184 6487188 R TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: mmc:Mmcs_5406 ParB-like partition proteins; parB-like partition proteins complement(6486184..6487188) Mycobacterium vanbaalenii PYR-1 4643301 YP_956830.1 CDS Mvan_6072 NC_008726.1 6487185 6488141 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmc:Mmcs_5407 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(6487185..6488141) Mycobacterium vanbaalenii PYR-1 4643302 YP_956831.1 CDS gidB NC_008726.1 6488141 6488824 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(6488141..6488824) Mycobacterium vanbaalenii PYR-1 4643303 YP_956832.1 CDS Mvan_6074 NC_008726.1 6488923 6489498 R PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: mmc:Mmcs_5409 single-stranded nucleic acid binding R3H; single-stranded nucleic acid binding R3H domain-containing protein complement(6488923..6489498) Mycobacterium vanbaalenii PYR-1 4643304 YP_956833.1 CDS Mvan_6075 NC_008726.1 6489535 6490659 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(6489535..6490659) Mycobacterium vanbaalenii PYR-1 4643305 YP_956834.1 CDS Mvan_6076 NC_008726.1 6490649 6490996 R PFAM: protein of unknown function DUF37; KEGG: mmc:Mmcs_5411 protein of unknown function DUF37; hypothetical protein complement(6490649..6490996) Mycobacterium vanbaalenii PYR-1 4643306 YP_956835.1 CDS rnpA NC_008726.1 6490993 6491352 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(6490993..6491352) Mycobacterium vanbaalenii PYR-1 4643307 YP_956836.1 CDS rpmH NC_008726.1 6491372 6491515 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(6491372..6491515) Mycobacterium vanbaalenii PYR-1 4643308 Mvan_R0001 tRNA Mvan_R0001 NC_008726.1 13216 13289 D tRNA-Ile 13216..13289 Mycobacterium vanbaalenii PYR-1 4644534 Mvan_R0002 tRNA Mvan_R0002 NC_008726.1 13436 13511 D tRNA-Ala 13436..13511 Mycobacterium vanbaalenii PYR-1 4644535 Mvan_R0003 tRNA Mvan_R0003 NC_008726.1 36595 36677 D tRNA-Leu 36595..36677 Mycobacterium vanbaalenii PYR-1 4644810 Mvan_R0006 tRNA Mvan_R0006 NC_008726.1 494275 494340 R tRNA-Ser complement(494275..494340) Mycobacterium vanbaalenii PYR-1 4648248 Mvan_R0007 tRNA Mvan_R0007 NC_008726.1 629824 629897 R tRNA-Gly complement(629824..629897) Mycobacterium vanbaalenii PYR-1 4643805 Mvan_R0009 tRNA Mvan_R0009 NC_008726.1 1025690 1025772 D tRNA-Tyr 1025690..1025772 Mycobacterium vanbaalenii PYR-1 4645782 Mvan_R0010 tRNA Mvan_R0010 NC_008726.1 1316426 1316498 D tRNA-Thr 1316426..1316498 Mycobacterium vanbaalenii PYR-1 4644276 Mvan_R0011 tRNA Mvan_R0011 NC_008726.1 1316550 1316623 D tRNA-Met 1316550..1316623 Mycobacterium vanbaalenii PYR-1 4644277 Mvan_R0012 tRNA Mvan_R0012 NC_008726.1 1318476 1318548 D tRNA-Trp 1318476..1318548 Mycobacterium vanbaalenii PYR-1 4646876 Mvan_R0013 tRNA Mvan_R0013 NC_008726.1 1937234 1937310 D tRNA-Met 1937234..1937310 Mycobacterium vanbaalenii PYR-1 4644074 Mvan_R0015 tRNA Mvan_R0015 NC_008726.1 2086423 2086498 D tRNA-Ala 2086423..2086498 Mycobacterium vanbaalenii PYR-1 4645798 Mvan_R0016 tRNA Mvan_R0016 NC_008726.1 2277882 2277956 D tRNA-Gln 2277882..2277956 Mycobacterium vanbaalenii PYR-1 4648803 Mvan_R0017 tRNA Mvan_R0017 NC_008726.1 2278020 2278095 D tRNA-Glu 2278020..2278095 Mycobacterium vanbaalenii PYR-1 4648804 Mvan_R0018 tRNA Mvan_R0018 NC_008726.1 2666393 2666467 R tRNA-Val complement(2666393..2666467) Mycobacterium vanbaalenii PYR-1 4643889 Mvan_R0019 tRNA Mvan_R0019 NC_008726.1 2666479 2666552 R tRNA-Cys complement(2666479..2666552) Mycobacterium vanbaalenii PYR-1 4643890 Mvan_R0020 tRNA Mvan_R0020 NC_008726.1 2666576 2666651 R tRNA-Gly complement(2666576..2666651) Mycobacterium vanbaalenii PYR-1 4643891 Mvan_R0021 tRNA Mvan_R0021 NC_008726.1 2667379 2667453 D tRNA-Val 2667379..2667453 Mycobacterium vanbaalenii PYR-1 4643893 Mvan_R0022 tRNA Mvan_R0022 NC_008726.1 3013083 3013159 R tRNA-Leu complement(3013083..3013159) Mycobacterium vanbaalenii PYR-1 4646497 Mvan_R0023 tRNA Mvan_R0023 NC_008726.1 3434315 3434399 D tRNA-Met 3434315..3434399 Mycobacterium vanbaalenii PYR-1 4647626 Mvan_R0024 tRNA Mvan_R0024 NC_008726.1 3478452 3478528 R tRNA-Pro complement(3478452..3478528) Mycobacterium vanbaalenii PYR-1 4644486 Mvan_R0028 tRNA Mvan_R0028 NC_008726.1 3563881 3563951 R tRNA-Cys complement(3563881..3563951) Mycobacterium vanbaalenii PYR-1 4644395 Mvan_R0029 tRNA Mvan_R0029 NC_008726.1 3705136 3705224 D tRNA-Leu 3705136..3705224 Mycobacterium vanbaalenii PYR-1 4649305 Mvan_R0031 tRNA Mvan_R0031 NC_008726.1 3988608 3988682 R tRNA-Val complement(3988608..3988682) Mycobacterium vanbaalenii PYR-1 4646814 Mvan_R0032 tRNA Mvan_R0032 NC_008726.1 4049352 4049425 R tRNA-Met complement(4049352..4049425) Mycobacterium vanbaalenii PYR-1 4645490 Mvan_R0033 tRNA Mvan_R0033 NC_008726.1 4062796 4062871 R tRNA-Asn complement(4062796..4062871) Mycobacterium vanbaalenii PYR-1 4645951 Mvan_R0034 tRNA Mvan_R0034 NC_008726.1 4324160 4324236 R tRNA-Pro complement(4324160..4324236) Mycobacterium vanbaalenii PYR-1 4648443 Mvan_R0035 tRNA Mvan_R0035 NC_008726.1 4324373 4324446 D tRNA-Gly 4324373..4324446 Mycobacterium vanbaalenii PYR-1 4643464 Mvan_R0036 tRNA Mvan_R0036 NC_008726.1 4368107 4368179 D tRNA-Arg 4368107..4368179 Mycobacterium vanbaalenii PYR-1 4649288 Mvan_R0037 tRNA Mvan_R0037 NC_008726.1 4393960 4394035 D tRNA-His 4393960..4394035 Mycobacterium vanbaalenii PYR-1 4648709 Mvan_R0038 tRNA Mvan_R0038 NC_008726.1 4395842 4395917 D tRNA-Lys 4395842..4395917 Mycobacterium vanbaalenii PYR-1 4648712 Mvan_R0039 tRNA Mvan_R0039 NC_008726.1 4590937 4591019 R tRNA-Leu complement(4590937..4591019) Mycobacterium vanbaalenii PYR-1 4648332 Mvan_R0043 tRNA Mvan_R0043 NC_008726.1 4667130 4667205 D tRNA-Arg 4667130..4667205 Mycobacterium vanbaalenii PYR-1 4647346 Mvan_R0045 tRNA Mvan_R0045 NC_008726.1 5081911 5081984 R tRNA-Leu complement(5081911..5081984) Mycobacterium vanbaalenii PYR-1 4647749 Mvan_R0046 tRNA Mvan_R0046 NC_008726.1 5121881 5121952 D tRNA-Gln 5121881..5121952 Mycobacterium vanbaalenii PYR-1 4644107 Mvan_R0047 tRNA Mvan_R0047 NC_008726.1 5168125 5168197 R tRNA-Ala complement(5168125..5168197) Mycobacterium vanbaalenii PYR-1 4646920 Mvan_R0048 tRNA Mvan_R0048 NC_008726.1 5280480 5280552 D tRNA-Arg 5280480..5280552 Mycobacterium vanbaalenii PYR-1 4648918 Mvan_R0050 tRNA Mvan_R0050 NC_008726.1 5446204 5446280 R tRNA-Phe complement(5446204..5446280) Mycobacterium vanbaalenii PYR-1 4644717 Mvan_R0051 tRNA Mvan_R0051 NC_008726.1 5446322 5446398 R tRNA-Asp complement(5446322..5446398) Mycobacterium vanbaalenii PYR-1 4644718 Mvan_R0052 tRNA Mvan_R0052 NC_008726.1 5446436 5446508 R tRNA-Glu complement(5446436..5446508) Mycobacterium vanbaalenii PYR-1 4644719 Mvan_R0053 tRNA Mvan_R0053 NC_008726.1 5446639 5446714 D tRNA-Lys 5446639..5446714 Mycobacterium vanbaalenii PYR-1 4644132 Mvan_R0054 tRNA Mvan_R0054 NC_008726.1 5540909 5540983 D tRNA-Thr 5540909..5540983 Mycobacterium vanbaalenii PYR-1 4647462 Mvan_R0056 tRNA Mvan_R0056 NC_008726.1 5774047 5774122 R tRNA-Thr complement(5774047..5774122) Mycobacterium vanbaalenii PYR-1 4648073 Mvan_R0057 tRNA Mvan_R0057 NC_008726.1 5824010 5824083 D tRNA-Pro 5824010..5824083 Mycobacterium vanbaalenii PYR-1 4644557 Mvan_R0059 tRNA Mvan_R0059 NC_008726.1 5916968 5917053 D tRNA-Ser 5916968..5917053 Mycobacterium vanbaalenii PYR-1 4645974 Mvan_R0060 tRNA Mvan_R0060 NC_008726.1 5973771 5973861 R tRNA-Ser complement(5973771..5973861) Mycobacterium vanbaalenii PYR-1 4646137 Mvan_R0061 tRNA Mvan_R0061 NC_008726.1 5988436 5988508 R tRNA-Arg complement(5988436..5988508) Mycobacterium vanbaalenii PYR-1 4644043 Mvan_R0062 tRNA Mvan_R0062 NC_008726.1 5988559 5988647 R tRNA-Ser complement(5988559..5988647) Mycobacterium vanbaalenii PYR-1 4644044 Mvan_R0063 tRNA Mvan_R0063 NC_008726.1 5991145 5991231 R tRNA-Ser complement(5991145..5991231) Mycobacterium vanbaalenii PYR-1 4644048 Mvan_R0064 tRNA Mvan_R0064 NC_008726.1 6252241 6252307 D tRNA-Ile 6252241..6252307 Mycobacterium vanbaalenii PYR-1 4647385 Mvan_R0025 rRNA Mvan_R0025 NC_008726.1 3500936 3501048 R 5S ribosomal RNA complement(3500936..3501048) Mycobacterium vanbaalenii PYR-1 4644874 Mvan_R0026 rRNA Mvan_R0026 NC_008726.1 3501176 3504289 R 23S ribosomal RNA complement(join(3501176..3502684,3502719..3504289)) Mycobacterium vanbaalenii PYR-1 4644875 Mvan_R0027 rRNA Mvan_R0027 NC_008726.1 3504692 3506206 R 16S ribosomal RNA complement(3504692..3506206) Mycobacterium vanbaalenii PYR-1 4644876 Mvan_R0040 rRNA Mvan_R0040 NC_008726.1 4634040 4634152 R 5S ribosomal RNA complement(4634040..4634152) Mycobacterium vanbaalenii PYR-1 4644124 Mvan_R0041 rRNA Mvan_R0041 NC_008726.1 4634280 4637393 R 23S ribosomal RNA complement(join(4634280..4635786,4635823..4637393)) Mycobacterium vanbaalenii PYR-1 4644125 Mvan_R0042 rRNA Mvan_R0042 NC_008726.1 4637795 4639309 R 16S ribosomal RNA complement(4637795..4639309) Mycobacterium vanbaalenii PYR-1 4644126