-- dump date   	20140619_153436
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004997868.1	manually curated
YP_004997869.1	PFAM: Protein kinase domain
YP_004997873.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004997874.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004997875.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004997876.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004997877.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004997878.1	PFAM: mce related protein
YP_004997879.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_004997880.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_004997881.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004997882.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
YP_004997884.1	manually curated
YP_004997885.1	TIGRFAM: hydrogenase maturation protease
YP_004997886.1	PFAM: Nickel-dependent hydrogenase
YP_004997887.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_004997888.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
YP_004997889.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit
YP_004997892.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004997893.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004997894.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_004997895.1	PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase
YP_004997896.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain
YP_004997897.1	PFAM: Domain of unknown function; domain; 4Fe-4S binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_004997898.1	PFAM: Dihydroorotate dehydrogenase
YP_004997899.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004997900.1	PFAM: Universal stress protein family
YP_004997901.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Trehalose-phosphatase; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_004997902.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family
YP_004997903.1	PFAM: 4Fe-4S binding domain
YP_004997906.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004997907.1	PFAM: short chain dehydrogenase
YP_004997908.1	PFAM: IclR helix-turn-helix domain; manually curated
YP_004997910.1	PFAM: short chain dehydrogenase
YP_004997911.1	PFAM: L,D-transpeptidase catalytic domain
YP_004997912.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004997913.1	PFAM: Carboxymuconolactone decarboxylase family
YP_004997914.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_004997915.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_004997917.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004997918.1	PFAM: short chain dehydrogenase
YP_004997919.1	PFAM: short chain dehydrogenase
YP_004997920.1	PFAM: short chain dehydrogenase
YP_004997921.1	PFAM: Cytochrome P450
YP_004997922.1	PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter
YP_004997923.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_004997924.1	PFAM: Acyl-ACP thioesterase
YP_004997925.1	PFAM: short chain dehydrogenase
YP_004997926.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_004997927.1	PFAM: Fatty acid desaturase
YP_004997928.1	PFAM: Sodium/hydrogen exchanger family
YP_004997929.1	PFAM: ABC-2 type transporter
YP_004997930.1	PFAM: ABC transporter
YP_004997931.1	PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004997932.1	PFAM: Tryptophan halogenase
YP_004997933.1	PFAM: Formate/nitrite transporter
YP_004997934.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_004997935.1	PFAM: DSBA-like thioredoxin domain
YP_004997936.1	PFAM: Prokaryotic protein of unknown function (DUF849)
YP_004997937.1	PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; Cytochrome P450
YP_004997938.1	PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_004997939.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_004997940.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_004997941.1	PFAM: VWA domain containing CoxE-like protein
YP_004997942.1	PFAM: AAA domain (dynein-related subfamily)
YP_004997943.1	PFAM: O-methyltransferase
YP_004997944.1	PFAM: short chain dehydrogenase
YP_004997946.1	PFAM: Amidohydrolase
YP_004997947.1	PFAM: Aldehyde dehydrogenase family
YP_004997949.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain; manually curated
YP_004997950.1	PFAM: Rieske [2Fe-2S] domain
YP_004997951.1	PFAM: short chain dehydrogenase
YP_004997952.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997953.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004997954.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997955.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997957.1	PFAM: Cytochrome P450
YP_004997958.1	PFAM: Cytochrome P450
YP_004997959.1	PFAM: CoA-transferase family III
YP_004997961.1	PFAM: Thiolase, C-terminal domain
YP_004997962.1	PFAM: CoA-transferase family III
YP_004997963.1	PFAM: Cytochrome P450
YP_004997964.1	PFAM: CoA-transferase family III; manually curated
YP_004997965.1	PFAM: CoA-transferase family III; manually curated; non-canonical start codon
YP_004997966.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004997967.1	PFAM: Cytochrome P450
YP_004997968.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997969.1	PFAM: AMP-binding enzyme
YP_004997970.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004997971.1	PFAM: short chain dehydrogenase
YP_004997973.1	PFAM: short chain dehydrogenase
YP_004997975.1	PFAM: Protein of unknown function (DUF3237)
YP_004997977.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997978.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997980.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_004997981.1	PFAM: MaoC like domain
YP_004997982.1	PFAM: short chain dehydrogenase
YP_004997983.1	PFAM: Protein of unknown function (DUF1271)
YP_004997984.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997985.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997986.1	PFAM: Phosphotransferase enzyme family
YP_004997988.1	PFAM: Amidohydrolase
YP_004997989.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_004997991.1	PFAM: short chain dehydrogenase
YP_004997992.1	PFAM: short chain dehydrogenase
YP_004997993.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997994.1	PFAM: Cytochrome P450
YP_004997995.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997996.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004997997.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997998.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004997999.1	PFAM: 2-nitropropane dioxygenase
YP_004998000.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998001.1	PFAM: Biotin-requiring enzyme
YP_004998002.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_004998004.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_004998006.1	PFAM: Luciferase-like monooxygenase
YP_004998007.1	PFAM: MaoC like domain
YP_004998008.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998009.1	PFAM: short chain dehydrogenase
YP_004998010.1	PFAM: AMP-binding enzyme
YP_004998012.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998013.1	PFAM: short chain dehydrogenase
YP_004998014.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998015.1	PFAM: short chain dehydrogenase
YP_004998017.1	PFAM: Domain of unknown function (DUF427); Acyl-CoA thioesterase
YP_004998018.1	manually curated
YP_004998019.1	PFAM: short chain dehydrogenase
YP_004998020.1	PFAM: short chain dehydrogenase
YP_004998021.1	PFAM: short chain dehydrogenase
YP_004998022.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998023.1	PFAM: Universal stress protein family
YP_004998024.1	PFAM: SPFH domain / Band 7 family
YP_004998027.1	PFAM: Region found in RelA / SpoT proteins
YP_004998030.1	PFAM: MarR family; manually curated; non-canonical start codon
YP_004998031.1	PFAM: Protein of unknown function, DUF488
YP_004998032.1	PFAM: Cobalamin-independent synthase, Catalytic domain; Cobalamin-independent synthase, N-terminal domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_004998033.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_004998034.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_004998035.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein; manually curated
YP_004998036.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004998037.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup
YP_004998038.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_004998039.1	PFAM: Hemerythrin HHE cation binding domain; manually curated
YP_004998040.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily
YP_004998041.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_004998042.1	PFAM: DoxX
YP_004998044.1	PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type
YP_004998045.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998047.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_004998048.1	PFAM: Uncharacterized conserved protein (DUF2249)
YP_004998049.1	PFAM: 4Fe-4S binding domain
YP_004998050.1	PFAM: HTH domain
YP_004998055.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family
YP_004998058.1	PFAM: Catalase; Catalase-related immune-responsive
YP_004998059.1	PFAM: Protein of unknown function (DUF1271)
YP_004998062.1	PFAM: FAD dependent oxidoreductase
YP_004998063.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_004998064.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_004998067.1	PFAM: MDMPI C-terminal domain; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_004998068.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998069.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998071.1	PFAM: Protein of unknown function (DUF3705)
YP_004998072.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004998073.1	PFAM: EamA-like transporter family
YP_004998074.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_004998075.1	PFAM: Predicted permease
YP_004998076.1	PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein
YP_004998078.1	PFAM: Mechanosensitive ion channel
YP_004998079.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_004998080.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998082.1	PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family
YP_004998083.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004998084.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998085.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_004998086.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family
YP_004998087.1	PFAM: Putative esterase
YP_004998088.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998089.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_004998090.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998091.1	PFAM: homogentisate 1,2-dioxygenase
YP_004998093.1	PFAM: CoA-transferase family III
YP_004998094.1	PFAM: HMGL-like
YP_004998095.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998096.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998097.1	PFAM: Phosphotransferase enzyme family
YP_004998099.1	PFAM: Methyltransferase domain
YP_004998101.1	PFAM: YceI-like domain
YP_004998102.1	PFAM: Response regulator receiver domain
YP_004998103.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004998104.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_004998105.1	PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C
YP_004998106.1	PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit
YP_004998107.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_004998108.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit
YP_004998109.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G
YP_004998110.1	PFAM: NADH dehydrogenase
YP_004998111.1	PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_004998112.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004998113.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_004998114.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_004998115.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_004998116.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_004998118.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998120.1	PFAM: Fatty acid desaturase
YP_004998121.1	PFAM: Phosphopantetheine attachment site
YP_004998122.1	PFAM: Fatty acid desaturase
YP_004998123.1	PFAM: Fatty acid desaturase
YP_004998124.1	PFAM: AMP-binding enzyme
YP_004998125.1	PFAM: Cytochrome P450
YP_004998126.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_004998127.1	PFAM: AMP-binding enzyme
YP_004998128.1	PFAM: ABC transporter
YP_004998129.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_004998130.1	PFAM: alpha/beta hydrolase fold
YP_004998131.1	PFAM: Phosphopantetheine attachment site
YP_004998132.1	PFAM: Phosphopantetheine attachment site; Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004998133.1	PFAM: GlcNAc-PI de-N-acetylase
YP_004998134.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998135.1	PFAM: Phosphotransferase enzyme family
YP_004998138.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_004998139.1	PFAM: Flavin-binding monooxygenase-like
YP_004998140.1	PFAM: Flavin-binding monooxygenase-like
YP_004998141.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family
YP_004998142.1	PFAM: Flavin containing amine oxidoreductase
YP_004998143.1	PFAM: alpha/beta hydrolase fold
YP_004998144.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004998145.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004998147.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_004998148.1	PFAM: Glycosyltransferase family 28 N-terminal domain; manually curated
YP_004998149.1	PFAM: Male sterility protein; Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; thioester reductase domain
YP_004998150.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_004998151.1	PFAM: MbtH-like protein
YP_004998153.1	PFAM: Glycosyltransferase family 28 N-terminal domain
YP_004998154.1	PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_004998155.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_004998156.1	PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance protein C; ABC transporter efflux protein, DrrB family
YP_004998157.1	PFAM: Glycosyl transferase family 2; manually curated
YP_004998158.1	TIGRFAM: methyltransferase, FkbM family
YP_004998159.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004998160.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_004998161.1	PFAM: Bacterial transferase hexapeptide (three repeats)
YP_004998162.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004998163.1	PFAM: WbqC-like protein family
YP_004998164.1	PFAM: Methyltransferase domain; manually curated
YP_004998166.1	PFAM: Glycosyl transferase family 2
YP_004998167.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase
YP_004998169.1	PFAM: Protein of unknown function (DUF2029)
YP_004998170.1	PFAM: Glycosyltransferase family 28 N-terminal domain
YP_004998171.1	PFAM: Macrocin-O-methyltransferase (TylF)
YP_004998172.1	PFAM: Macrocin-O-methyltransferase (TylF)
YP_004998173.1	PFAM: Glycosyltransferase family 28 N-terminal domain
YP_004998174.1	PFAM: Glycosyltransferase family 28 N-terminal domain
YP_004998175.1	PFAM: Macrocin-O-methyltransferase (TylF)
YP_004998176.1	PFAM: Acyltransferase family
YP_004998177.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004998178.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_004998179.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_004998180.1	PFAM: Mycobacterium membrane protein
YP_004998182.1	PFAM: alpha/beta hydrolase fold; manually curated
YP_004998183.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004998184.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004998186.1	PFAM: Uncharacterised protein family (UPF0182)
YP_004998187.1	PFAM: Lon protease (S16) C-terminal proteolytic domain
YP_004998188.1	PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase
YP_004998190.1	PFAM: ABC1 family
YP_004998191.1	PFAM: Transcription factor WhiB; AT hook motif
YP_004998193.1	PFAM: HRDC domain; UvrD/REP helicase; manually curated
YP_004998194.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein
YP_004998195.1	PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain
YP_004998196.1	PFAM: Ion channel; TrkA-N domain
YP_004998198.1	PFAM: UvrD/REP helicase
YP_004998199.1	PFAM: UvrD/REP helicase
YP_004998200.1	PFAM: alpha/beta hydrolase fold
YP_004998201.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain
YP_004998202.1	TIGRFAM: TIGR02569 family protein
YP_004998203.1	PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family
YP_004998204.1	PFAM: Protein of unknown function (DUF3152)
YP_004998205.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998206.1	PFAM: Protein of unknown function (DUF3107)
YP_004998208.1	PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
YP_004998209.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004998211.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004998212.1	PFAM: Phosphoglycerate mutase family
YP_004998213.1	PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_004998214.1	PFAM: Acetyltransferase (GNAT) family
YP_004998216.1	PFAM: Diacylglycerol kinase catalytic domain
YP_004998217.1	PFAM: Transcription factor WhiB
YP_004998218.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transduction histidine kinase
YP_004998219.1	PFAM: Biotin-requiring enzyme
YP_004998221.1	TIGRFAM: mycothiol system anti-sigma-R factor; anti-sigma factor, TIGR02949 family
YP_004998222.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family
YP_004998223.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_004998224.1	PFAM: short chain dehydrogenase
YP_004998225.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_004998226.1	PFAM: Uncharacterized conserved protein (COG2071)
YP_004998227.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998228.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004998231.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_004998233.1	PFAM: Uncharacterised ACR, COG2135
YP_004998234.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004998235.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_004998236.1	PFAM: Papain-like cysteine protease AvrRpt2
YP_004998237.1	PFAM: Fatty acid desaturase
YP_004998238.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_004998240.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_004998241.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004998243.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004998244.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_004998245.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_004998246.1	PFAM: Phosphoribosyl transferase domain
YP_004998247.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2252)
YP_004998248.1	PFAM: Rieske [2Fe-2S] domain
YP_004998251.1	PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination
YP_004998252.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004998253.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004998254.1	PFAM: Papain-like cysteine protease AvrRpt2
YP_004998255.1	PFAM: Protein kinase domain
YP_004998256.1	PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; FHA domain
YP_004998258.1	PFAM: Thymidylate kinase
YP_004998259.1	PFAM: Bacterial protein of unknown function (DUF899)
YP_004998260.1	PFAM: Secretory lipase
YP_004998262.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_004998263.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998265.1	PFAM: Rubredoxin
YP_004998266.1	PFAM: Rubredoxin
YP_004998267.1	PFAM: Fatty acid desaturase
YP_004998268.1	PFAM: Protein of unknown function (DUF559)
YP_004998269.1	PFAM: Amino acid permease
YP_004998271.1	PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_004998273.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_004998274.1	PFAM: Protein of unknown function (DUF3499); manually curated
YP_004998275.1	PFAM: Domain of unknown function (DUF1025)
YP_004998276.1	PFAM: Transcription factor WhiB
YP_004998277.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: LPPG:FO 2-phospho-L-lactate transferase
YP_004998278.1	PFAM: F420-0:Gamma-glutamyl ligase; Nitroreductase family; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-0:gamma-glutamyl ligase
YP_004998279.1	PFAM: NUDIX domain
YP_004998280.1	PFAM: Nucleotidyl transferase
YP_004998281.1	PFAM: Glycosyl transferase family 2
YP_004998282.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; manually curated
YP_004998283.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_004998284.1	TIGRFAM: TIGR03089 family protein
YP_004998285.1	PFAM: Multicopper oxidase
YP_004998286.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998287.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_004998288.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_004998289.1	PFAM: GtrA-like protein
YP_004998290.1	PFAM: Bacterial membrane flanked domain
YP_004998291.1	PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_004998292.1	PFAM: Carboxyl transferase domain
YP_004998294.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_004998295.1	PFAM: Rhodanese-like domain
YP_004998296.1	PFAM: Fe-S metabolism associated domain
YP_004998297.1	PFAM: short chain dehydrogenase
YP_004998298.1	PFAM: Cytochrome P450
YP_004998299.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_004998300.1	PFAM: NmrA-like family
YP_004998303.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004998306.1	PFAM: Eukaryotic DNA topoisomerase I, catalytic core
YP_004998309.1	PFAM: CsbD-like
YP_004998311.1	PFAM: NADPH-dependent FMN reductase
YP_004998313.1	PFAM: Restriction endonuclease
YP_004998314.1	PFAM: Aminotransferase class-III; TIGRFAM: L-lysine 6-transaminase
YP_004998315.1	PFAM: AsnC family
YP_004998316.1	PFAM: Protein of unknown function (DUF1338)
YP_004998317.1	PFAM: Aldehyde dehydrogenase family
YP_004998318.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998319.1	PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_004998320.1	PFAM: 2-nitropropane dioxygenase
YP_004998321.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS
YP_004998322.1	PFAM: Fatty acid desaturase
YP_004998323.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_004998324.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004998325.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998326.1	PFAM: short chain dehydrogenase
YP_004998328.1	PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain
YP_004998329.1	PFAM: RNA pseudouridylate synthase
YP_004998330.1	PFAM: FAD dependent oxidoreductase
YP_004998331.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_004998332.1	PFAM: AIG2-like family
YP_004998333.1	PFAM: FAD binding domain
YP_004998334.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998335.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase
YP_004998336.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_004998337.1	PFAM: Phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleotide phosphorylase
YP_004998338.1	PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_004998339.1	PFAM: MarR family
YP_004998340.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_004998341.1	PFAM: FAD binding domain
YP_004998342.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_004998343.1	PFAM: Protein of unknown function (DUF2580)
YP_004998344.1	PFAM: FAD binding domain
YP_004998345.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004998346.1	PFAM: NlpC/P60 family
YP_004998347.1	PFAM: Acyltransferase
YP_004998348.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; manually curated
YP_004998350.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_004998351.1	PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_004998352.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_004998353.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit
YP_004998354.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit
YP_004998355.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_004998356.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004998357.1	TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_004998358.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998359.1	PFAM: Amino acid permease
YP_004998360.1	PFAM: Universal stress protein family
YP_004998361.1	PFAM: Amino acid permease; TIGRFAM: gamma-aminobutyrate permease
YP_004998362.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: 1-pyrroline dehydrogenase
YP_004998363.1	PFAM: AsnC family
YP_004998364.1	PFAM: Aminotransferase class-III
YP_004998365.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004998366.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_004998367.1	PFAM: Small Multidrug Resistance protein
YP_004998368.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease, putative
YP_004998369.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_004998371.1	PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type
YP_004998372.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_004998373.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_004998374.1	PFAM: Methyltransferase domain
YP_004998375.1	PFAM: Protein of unknown function (DUF3017)
YP_004998376.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004998377.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_004998379.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998381.1	PFAM: ABC transporter; ABC-2 type transporter; FHA domain
YP_004998382.1	PFAM: Acetyltransferase (GNAT) family
YP_004998383.1	PFAM: Amidohydrolase
YP_004998384.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_004998385.1	PFAM: Pentapeptide repeats (8 copies)
YP_004998386.1	PFAM: Conserved hypothetical ATP binding protein
YP_004998387.1	PFAM: Protein of unknown function (DUF742)
YP_004998388.1	PFAM: Roadblock/LC7 domain
YP_004998389.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004998390.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_004998391.1	PFAM: Nitroreductase family
YP_004998392.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv3369 family
YP_004998393.1	PFAM: Major Facilitator Superfamily
YP_004998394.1	PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_004998395.1	PFAM: Domain of unknown function DUF222
YP_004998396.1	PFAM: Amino acid permease
YP_004998397.1	PFAM: Universal stress protein family
YP_004998398.1	PFAM: MaoC like domain
YP_004998399.1	PFAM: Male sterility protein; short chain dehydrogenase
YP_004998400.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_004998402.1	PFAM: impB/mucB/samB family
YP_004998404.1	PFAM: alpha/beta hydrolase fold
YP_004998405.1	PFAM: short chain dehydrogenase
YP_004998407.1	PFAM: Flavin-binding monooxygenase-like
YP_004998409.1	PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_004998410.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
YP_004998412.1	PFAM: Sodium:solute symporter family
YP_004998413.1	PFAM: Luciferase-like monooxygenase; manually curated
YP_004998414.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A
YP_004998415.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_004998416.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004998417.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain
YP_004998418.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_004998419.1	PFAM: GMC oxidoreductase
YP_004998420.1	PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein
YP_004998421.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_004998424.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998426.1	PFAM: Transcription factor WhiB
YP_004998429.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004998431.1	manually curated
YP_004998434.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_004998435.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004998436.1	PFAM: Chaperonin 10 Kd subunit
YP_004998437.1	PFAM: alpha/beta hydrolase fold
YP_004998438.1	PFAM: Ring hydroxylating beta subunit
YP_004998439.1	PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_004998440.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_004998441.1	PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_004998442.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_004998443.1	PFAM: alpha/beta hydrolase fold
YP_004998444.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_004998445.1	PFAM: Pyridoxal-dependent decarboxylase conserved domain; TIGRFAM: glutamate decarboxylase
YP_004998446.1	PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_004998448.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_004998449.1	manually curated
YP_004998450.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv3520c family
YP_004998451.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004998452.1	PFAM: Integrase core domain
YP_004998453.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_004998454.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_004998457.1	PFAM: Protein of unknown function (DUF2580)
YP_004998458.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_004998461.1	PFAM: Protein of unknown function DUF124
YP_004998462.1	PFAM: Ribosomal protein S9/S16
YP_004998463.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_004998464.1	PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target
YP_004998465.1	PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target
YP_004998466.1	TIGRFAM: type VII secretion-associated protein, Rv3446c family, C-terminal domain
YP_004998467.1	PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb; type VII secretion protein EccCa
YP_004998468.1	PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4; type VII secretion integral membrane protein EccD; manually curated
YP_004998469.1	PFAM: Subtilase family; TIGRFAM: type VII secretion-associated serine protease mycosin
YP_004998470.1	PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial
YP_004998471.1	PFAM: Protein of unknown function (DUF1470); CGNR zinc finger
YP_004998472.1	PFAM: EamA-like transporter family
YP_004998473.1	PFAM: Cutinase
YP_004998474.1	PFAM: Cutinase
YP_004998475.1	PFAM: Cutinase
YP_004998476.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_004998477.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_004998478.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_004998479.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_004998480.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_004998481.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_004998482.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_004998483.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Response regulator receiver domain
YP_004998484.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Cyclic nucleotide-binding domain
YP_004998485.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_4141 family
YP_004998486.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_4141 family
YP_004998488.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_004998489.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_004998490.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase
YP_004998491.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998492.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase
YP_004998493.1	PFAM: Beta-lactamase
YP_004998494.1	TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004998495.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004998496.1	PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004998497.1	PFAM: MarR family
YP_004998499.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_004998500.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004998502.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_004998504.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998505.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_004998506.1	PFAM: Adenylate kinase; TIGRFAM: adenylate kinases
YP_004998507.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_004998508.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004998509.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004998510.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004998511.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_004998512.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004998513.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_004998514.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type
YP_004998515.1	PFAM: Protein of unknown function (DUF732)
YP_004998516.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_004998517.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_004998518.1	PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_004998519.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_004998520.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_004998521.1	PFAM: Ribosomal protein S8
YP_004998522.1	PFAM: Ribosomal protein S14p/S29e
YP_004998523.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_004998524.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_004998525.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_004998526.1	PFAM: Formylglycine-generating sulfatase enzyme
YP_004998527.1	PFAM: Probable lipoprotein LpqN
YP_004998528.1	PFAM: Sulfatase
YP_004998529.1	PFAM: Predicted membrane protein (DUF2306)
YP_004998530.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_004998531.1	PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_004998532.1	PFAM: GAF domain
YP_004998533.1	PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_004998534.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_004998535.1	PFAM: Flavin containing amine oxidoreductase
YP_004998537.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_004998538.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_004998539.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_004998540.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_004998541.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_004998542.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_004998543.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_004998544.1	PFAM: Ribosomal protein L23
YP_004998545.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle
YP_004998546.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_004998547.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_004998548.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004998549.1	PFAM: Carboxylesterase
YP_004998550.1	PFAM: Cytochrome P450
YP_004998551.1	PFAM: Cytochrome P450
YP_004998552.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998553.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_004998554.1	PFAM: GMC oxidoreductase; TIGRFAM: dehydrogenase, Rv0697 family; manually curated
YP_004998555.1	PFAM: Glycosyl transferase family 2; TIGRFAM: mycofactocin system glycosyltransferase
YP_004998556.1	PFAM: Creatinine amidohydrolase; TIGRFAM: creatinine amidohydrolase family protein, mycofactocin system
YP_004998557.1	PFAM: FMN-dependent dehydrogenase; TIGRFAM: heme/flavin dehydrogenase, mycofactocin system
YP_004998558.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM peptide maturase, mycofactocin system; radical SAM additional 4Fe4S-binding domain
YP_004998559.1	TIGRFAM: mycofactocin system RPExFGAL protein
YP_004998560.1	TIGRFAM: mycofactocin precursor
YP_004998561.1	PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: mycofactocin system transcriptional regulator
YP_004998562.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998563.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004998564.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998565.1	PFAM: AsnC family
YP_004998566.1	PFAM: Amidinotransferase
YP_004998567.1	PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase
YP_004998568.1	PFAM: Amino acid permease; TIGRFAM: amino acid transporter
YP_004998569.1	PFAM: Universal stress protein family
YP_004998570.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_004998571.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_004998572.1	PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family
YP_004998574.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_004998575.1	PFAM: Cutinase
YP_004998576.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004998577.1	PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_004998578.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004998579.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_004998580.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_004998581.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998582.1	PFAM: Protein of unknown function (DUF3558)
YP_004998583.1	PFAM: Protein of unknown function (DUF3558)
YP_004998584.1	PFAM: Protein of unknown function (DUF3060)
YP_004998585.1	PFAM: Protein of unknown function (DUF3060)
YP_004998587.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998588.1	PFAM: PaaX-like protein C-terminal domain; PaaX-like protein
YP_004998589.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998590.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_004998591.1	PFAM: PAP2 superfamily
YP_004998592.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_004998593.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_004998594.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_004998596.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_004998597.1	PFAM: ABC transporter
YP_004998598.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_004998599.1	PFAM: Ribosomal protein L10
YP_004998600.1	PFAM: ROK family
YP_004998602.1	PFAM: Glycosyl hydrolases family 38 C-terminal domain; NPCBM-associated, NEW3 domain of alpha-galactosidase; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain
YP_004998603.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004998605.1	PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain
YP_004998607.1	PFAM: HTH domain
YP_004998609.1	PFAM: Protein of unknown function (DUF664)
YP_004998610.1	PFAM: alpha/beta hydrolase fold
YP_004998613.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998614.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_004998615.1	PFAM: Sugar (and other) transporter
YP_004998616.1	PFAM: Phosphotransferase enzyme family; ABC1 family
YP_004998617.1	PFAM: alpha/beta hydrolase fold
YP_004998618.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004998619.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004998620.1	PFAM: PE-PPE domain
YP_004998621.1	PFAM: YCII-related domain
YP_004998622.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998624.1	PFAM: Bacterial regulatory proteins, luxR family
YP_004998625.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_004998626.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_004998627.1	PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG
YP_004998628.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_004998630.1	PFAM: MaoC like domain
YP_004998632.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_004998633.1	PFAM: Protein of unknown function DUF88
YP_004998634.1	PFAM: Metallo-beta-lactamase superfamily
YP_004998635.1	PFAM: Telomeric repeat-binding factor 2; Protein of unknown function (DUF2510)
YP_004998637.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004998638.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998640.1	PFAM: HD domain; Bacterial regulatory proteins, luxR family
YP_004998641.1	PFAM: NnrU protein
YP_004998642.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_004998643.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998644.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_004998645.1	PFAM: Protein of unknown function (DUF3060)
YP_004998648.1	PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit
YP_004998649.1	PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit
YP_004998650.1	PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit
YP_004998651.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998652.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004998653.1	PFAM: Sulfatase
YP_004998654.1	PFAM: Metallo-beta-lactamase superfamily
YP_004998655.1	PFAM: AMP-binding enzyme
YP_004998656.1	PFAM: GAF domain; ANTAR domain
YP_004998657.1	PFAM: GAF domain; ANTAR domain
YP_004998658.1	PFAM: ANTAR domain; manually curated
YP_004998659.1	PFAM: Fatty acid desaturase
YP_004998661.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; manually curated
YP_004998662.1	PFAM: Glycosyl transferases group 1
YP_004998663.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_004998664.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase
YP_004998665.1	PFAM: Domain of unknown function (DUF377)
YP_004998667.1	PFAM: Glycosyl transferases group 1; manually curated
YP_004998672.1	PFAM: Domain of unknown function (DUF1942)
YP_004998673.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family
YP_004998674.1	PFAM: Putative esterase
YP_004998675.1	PFAM: Flavin containing amine oxidoreductase
YP_004998676.1	PFAM: Beta-lactamase
YP_004998678.1	PFAM: RES domain
YP_004998679.1	PFAM: alpha/beta hydrolase fold
YP_004998680.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_004998681.1	PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_004998682.1	PFAM: Domain of Unknown Function (DUF1206)
YP_004998684.1	PFAM: Protein phosphatase 2C
YP_004998685.1	PFAM: PIF1 helicase; manually curated
YP_004998686.1	PFAM: RibD C-terminal domain
YP_004998687.1	PFAM: Beta-lactamase
YP_004998688.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998690.1	PFAM: ABC transporter
YP_004998691.1	PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004998692.1	PFAM: alpha/beta hydrolase fold
YP_004998693.1	PFAM: alpha/beta hydrolase fold
YP_004998694.1	PFAM: YceI-like domain
YP_004998695.1	PFAM: Helix-turn-helix
YP_004998696.1	PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain
YP_004998697.1	PFAM: Protein of unknown function (DUF3298)
YP_004998698.1	PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3
YP_004998699.1	PFAM: MarR family
YP_004998701.1	PFAM: Glycosyl hydrolases family 15
YP_004998702.1	PFAM: short chain dehydrogenase
YP_004998703.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_004998706.1	PFAM: GMC oxidoreductase
YP_004998707.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_004998710.1	PFAM: SPFH domain / Band 7 family
YP_004998712.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_004998714.1	PFAM: PIN domain
YP_004998715.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_004998721.1	PFAM: ADP-ribosylglycohydrolase; Dual specificity phosphatase, catalytic domain
YP_004998724.1	PFAM: Protein of unknown function (DUF1810)
YP_004998725.1	PFAM: Nuclease-related domain
YP_004998726.1	PFAM: Aldo/keto reductase family
YP_004998727.1	PFAM: Protein of unknown function (DUF732)
YP_004998732.1	PFAM: RecF/RecN/SMC N terminal domain
YP_004998734.1	PFAM: HNH endonuclease
YP_004998736.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427)
YP_004998739.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004998741.1	manually curated
YP_004998742.1	PFAM: IstB-like ATP binding protein
YP_004998743.1	PFAM: Type III restriction enzyme, res subunit
YP_004998744.1	PFAM: DNA methylase
YP_004998746.1	PFAM: UvrD/REP helicase
YP_004998748.1	PFAM: Protein of unknown function (DUF3375)
YP_004998750.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004998751.1	PFAM: GAF domain; Stage II sporulation protein E (SpoIIE)
YP_004998754.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_004998755.1	PFAM: PIN domain
YP_004998756.1	PFAM: Lsr2
YP_004998758.1	PFAM: SEC-C motif
YP_004998759.1	PFAM: Plasmid pRiA4b ORF-3-like protein
YP_004998762.1	PFAM: Cupin superfamily protein
YP_004998763.1	PFAM: Sucrase/ferredoxin-like
YP_004998765.1	PFAM: alpha/beta hydrolase fold
YP_004998767.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998769.1	PFAM: Major Facilitator Superfamily
YP_004998770.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv3520c family
YP_004998771.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004998772.1	PFAM: DNA gyrase/topoisomerase IV, subunit A
YP_004998773.1	manually curated
YP_004998775.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_004998776.1	PFAM: Transglutaminase-like superfamily
YP_004998777.1	PFAM: Protein of unknown function (DUF3072)
YP_004998778.1	PFAM: Predicted metal-dependent hydrolase
YP_004998779.1	PFAM: Protein of unknown function (DUF1271)
YP_004998780.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004998781.1	PFAM: FAD binding domain
YP_004998782.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004998783.1	PFAM: Cytochrome P450
YP_004998784.1	PFAM: AMP-binding enzyme
YP_004998785.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_004998787.1	PFAM: MaoC like domain
YP_004998789.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_004998790.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004998791.1	PFAM: Mycobacterium 19 kDa lipoprotein antigen
YP_004998792.1	PFAM: Cytochrome P450
YP_004998793.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998794.1	PFAM: Beta-lactamase
YP_004998796.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998798.1	PFAM: Protein kinase domain
YP_004998799.1	PFAM: Cyclic nucleotide-binding domain
YP_004998801.1	PFAM: Protein kinase domain
YP_004998802.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004998803.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004998804.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004998807.1	PFAM: 'Cold-shock' DNA-binding domain
YP_004998809.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_004998812.1	PFAM: Protein kinase domain
YP_004998814.1	PFAM: Protein kinase domain; Bacterial extracellular solute-binding proteins, family 3
YP_004998815.1	PFAM: Cytochrome P450
YP_004998817.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_004998818.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2237)
YP_004998820.1	PFAM: short chain dehydrogenase
YP_004998821.1	PFAM: Bacterial regulatory proteins, luxR family
YP_004998823.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_004998824.1	PFAM: Amino acid permease
YP_004998825.1	PFAM: Berberine and berberine like; FAD binding domain
YP_004998826.1	PFAM: Amino acid permease; Protein of unknown function (DUF3493)
YP_004998828.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004998829.1	PFAM: Bacterial regulatory protein, arsR family
YP_004998835.1	PFAM: Beta-lactamase
YP_004998836.1	PFAM: short chain dehydrogenase
YP_004998838.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004998839.1	PFAM: AMP-binding enzyme
YP_004998841.1	PFAM: Sulfatase
YP_004998844.1	PFAM: Protein of unknown function (DUF520)
YP_004998845.1	PFAM: Transglutaminase-like superfamily
YP_004998846.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; manually curated
YP_004998848.1	PFAM: Peptidase family M48
YP_004998849.1	PFAM: Polyprenyl synthetase
YP_004998850.1	PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family
YP_004998851.1	manually curated
YP_004998852.1	manually curated
YP_004998854.1	PFAM: alpha/beta hydrolase fold
YP_004998855.1	PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_004998856.1	PFAM: short chain dehydrogenase
YP_004998857.1	PFAM: Glycosyl transferases group 1
YP_004998860.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; manually curated
YP_004998861.1	PFAM: alpha/beta hydrolase fold
YP_004998862.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998863.1	PFAM: Integrase core domain
YP_004998864.1	PFAM: DJ-1/PfpI family
YP_004998865.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_004998866.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YP_004998867.1	PFAM: Domain of unknown function (DUF427)
YP_004998868.1	PFAM: TspO/MBR family
YP_004998869.1	PFAM: SOUL heme-binding protein
YP_004998870.1	PFAM: AMP-binding enzyme
YP_004998871.1	PFAM: Amidohydrolase family
YP_004998872.1	PFAM: YCII-related domain
YP_004998873.1	PFAM: Protein of unknown function (DUF3253)
YP_004998874.1	PFAM: AMP-binding enzyme
YP_004998875.1	PFAM: Zeta toxin
YP_004998877.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004998878.1	PFAM: Nodulation protein S (NodS)
YP_004998879.1	PFAM: GlcNAc-PI de-N-acetylase
YP_004998880.1	PFAM: Acyl-CoA dehydrogenase, middle domain
YP_004998881.1	PFAM: Glycosyl transferase family 2
YP_004998882.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
YP_004998883.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998884.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998885.1	PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase)
YP_004998886.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_004998887.1	PFAM: short chain dehydrogenase
YP_004998888.1	PFAM: AMP-binding enzyme
YP_004998889.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004998890.1	PFAM: Protein of unknown function (DUF3349)
YP_004998892.1	PFAM: Phosphate transporter family
YP_004998893.1	PFAM: Protein of unknown function (DUF3349)
YP_004998894.1	PFAM: AMP-binding enzyme
YP_004998895.1	PFAM: Domain of unknown function DUF222
YP_004998896.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_004998897.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family
YP_004998899.1	PFAM: Oxidoreductase molybdopterin binding domain
YP_004998902.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2064)
YP_004998903.1	PFAM: Glycosyl transferase family 2
YP_004998904.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004998905.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sodium:solute symporter family; His Kinase A (phosphoacceptor) domain
YP_004998906.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998908.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily
YP_004998909.1	PFAM: Putative lysophospholipase
YP_004998910.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004998911.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase
YP_004998913.1	PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_004998914.1	PFAM: Protein of unknown function (DUF1214)
YP_004998915.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998917.1	PFAM: SnoaL-like polyketide cyclase
YP_004998918.1	PFAM: Aminotransferase class-V
YP_004998921.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004998922.1	PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB
YP_004998923.1	PFAM: ResB-like family
YP_004998924.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_004998925.1	PFAM: AhpC/TSA family
YP_004998926.1	PFAM: Phosphoglycerate mutase family
YP_004998927.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_004998928.1	TIGRFAM: DivIVA domain; manually curated
YP_004998929.1	PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; VCBS repeat
YP_004998930.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998931.1	PFAM: Cytochrome P450
YP_004998934.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998935.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_004998936.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004998940.1	manually curated
YP_004998941.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_004998942.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD
YP_004998943.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_004998944.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_004998945.1	PFAM: Glutaredoxin-like domain (DUF836)
YP_004998946.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_004998947.1	PFAM: MaoC like domain
YP_004998948.1	PFAM: Acyltransferase
YP_004998949.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004998950.1	TIGRFAM: DNA binding domain, excisionase family
YP_004998951.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_004998953.1	PFAM: Xylose isomerase-like TIM barrel
YP_004998955.1	PFAM: Ppx/GppA phosphatase family; manually curated
YP_004998957.1	PFAM: YCII-related domain
YP_004998958.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004998959.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004998960.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1
YP_004998961.1	PFAM: Protein of unknown function (DUF2596)
YP_004998962.1	PFAM: Glycosyl transferases group 1; TIGRFAM: UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase; manually curated
YP_004998963.1	PFAM: ROK family
YP_004998964.1	PFAM: short chain dehydrogenase
YP_004998965.1	PFAM: L,D-transpeptidase catalytic domain
YP_004998966.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004998967.1	PFAM: Protein of unknown function (DUF2505)
YP_004998968.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004998969.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004998972.1	PFAM: Cytochrome c oxidase subunit III; manually curated
YP_004998974.1	manually curated
YP_004998976.1	PFAM: Cytochrome P450
YP_004998977.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004998978.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004998979.1	PFAM: Cytochrome P450
YP_004998980.1	PFAM: short chain dehydrogenase
YP_004998981.1	PFAM: Amidohydrolase
YP_004998982.1	PFAM: Aldehyde dehydrogenase family
YP_004998983.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998984.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998985.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998986.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998987.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998988.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004998989.1	PFAM: Cytochrome P450
YP_004998991.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_004998992.1	PFAM: CoA-transferase family III
YP_004998993.1	PFAM: Phosphotransferase enzyme family
YP_004998994.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_004998995.1	PFAM: AMP-binding enzyme
YP_004998997.1	PFAM: Sodium:solute symporter family
YP_004998998.1	PFAM: Arginase family; TIGRFAM: agmatinase
YP_004998999.1	PFAM: Carbon-nitrogen hydrolase
YP_004999002.1	PFAM: Subtilase family; Pro-kumamolisin, activation domain
YP_004999004.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_004999005.1	PFAM: Protein of unknown function (DUF2599)
YP_004999006.1	PFAM: Protein of unknown function (DUF2516)
YP_004999008.1	PFAM: Helix-turn-helix
YP_004999009.1	PFAM: Protein of unknown function (DUF445); manually curated
YP_004999010.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999011.1	PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family
YP_004999013.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_004999014.1	PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase
YP_004999015.1	PFAM: Acyl-ACP thioesterase
YP_004999016.1	PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955)
YP_004999017.1	PFAM: Carboxymuconolactone decarboxylase family
YP_004999019.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_004999022.1	PFAM: Protein of unknown function (DUF779)
YP_004999023.1	PFAM: Aldehyde dehydrogenase family
YP_004999024.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_004999025.1	PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme
YP_004999026.1	PFAM: Imelysin
YP_004999027.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004999028.1	PFAM: Protein of unknown function (DUF2889)
YP_004999030.1	PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family
YP_004999031.1	PFAM: Aldehyde dehydrogenase family
YP_004999032.1	PFAM: PAP2 superfamily
YP_004999033.1	PFAM: Protein of unknown function (DUF664)
YP_004999034.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004999035.1	PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family
YP_004999037.1	PFAM: short chain dehydrogenase
YP_004999038.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein
YP_004999040.1	PFAM: Protein of unknown function (DUF559)
YP_004999041.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004999042.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999043.1	PFAM: short chain dehydrogenase
YP_004999044.1	PFAM: Cupin domain
YP_004999045.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_004999046.1	PFAM: Type III restriction enzyme, res subunit
YP_004999047.1	PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; FHA domain
YP_004999048.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004999050.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458
YP_004999051.1	PFAM: Bacterial membrane flanked domain
YP_004999052.1	PFAM: Bacterial membrane flanked domain
YP_004999053.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004999054.1	PFAM: short chain dehydrogenase
YP_004999055.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_004999056.1	PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein
YP_004999057.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_004999058.1	PFAM: Cell division protein 48 (CDC48), N-terminal domain; ATPase family associated with various cellular activities (AAA)
YP_004999059.1	PFAM: Methyltransferase domain
YP_004999060.1	PFAM: Domain of unknown function (DUF1707)
YP_004999061.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004999062.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004999063.1	PFAM: CBS domain
YP_004999064.1	PFAM: Citrate transporter
YP_004999065.1	PFAM: FAD binding domain
YP_004999066.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter
YP_004999067.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_004999068.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_004999069.1	PFAM: Na+/H+ ion antiporter subunit
YP_004999070.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_004999071.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_004999072.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004999073.1	PFAM: ATP-dependent protease La (LON) domain
YP_004999074.1	PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: carboxylate-amine ligase, YbdK family
YP_004999075.1	PFAM: Copper/zinc superoxide dismutase (SODC)
YP_004999077.1	PFAM: Protein of unknown function (DUF3263)
YP_004999078.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_004999079.1	PFAM: Acetyltransferase (GNAT) family
YP_004999080.1	PFAM: Domain of unknown function DUF222
YP_004999081.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_004999082.1	PFAM: Major Facilitator Superfamily
YP_004999083.1	PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_004999084.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_004999085.1	PFAM: Dienelactone hydrolase family
YP_004999087.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004999089.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999092.1	PFAM: Amino acid permease
YP_004999093.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_004999094.1	PFAM: PA domain; Peptidase family M28
YP_004999095.1	PFAM: PA domain; Peptidase family M28
YP_004999097.1	PFAM: Thiazole biosynthesis protein ThiG
YP_004999098.1	PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_004999099.1	PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO
YP_004999101.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_004999102.1	PFAM: NUDIX domain
YP_004999104.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_004999105.1	PFAM: Protein kinase domain
YP_004999106.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004999107.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_004999108.1	PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_004999110.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004999111.1	PFAM: NAD dependent epimerase/dehydratase family
YP_004999112.1	PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1
YP_004999113.1	PFAM: GlcNAc-PI de-N-acetylase
YP_004999114.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_004999116.1	PFAM: Chain length determinant protein
YP_004999117.1	PFAM: Glycosyl transferase family 2
YP_004999119.1	PFAM: Polysaccharide biosynthesis protein
YP_004999121.1	PFAM: Glycosyl hydrolases family 6
YP_004999122.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; glucose-6-phosphate dehydrogenase (coenzyme-F420)
YP_004999123.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999125.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
YP_004999126.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_004999127.1	PFAM: Luciferase-like monooxygenase
YP_004999128.1	PFAM: Acetyltransferase (GNAT) family
YP_004999129.1	PFAM: short chain dehydrogenase
YP_004999130.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_004999131.1	PFAM: short chain dehydrogenase
YP_004999133.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase
YP_004999134.1	PFAM: Rhodanese-like domain
YP_004999136.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2
YP_004999137.1	PFAM: Zn-finger in ubiquitin-hydrolases and other protein; manually curated
YP_004999138.1	PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_004999139.1	PFAM: MarR family; manually curated
YP_004999140.1	PFAM: MMPL family
YP_004999141.1	PFAM: alpha/beta hydrolase fold
YP_004999142.1	PFAM: Cytochrome P450
YP_004999143.1	PFAM: Protein of unknown function (DUF1271)
YP_004999145.1	PFAM: Thioesterase superfamily
YP_004999146.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_004999148.1	PFAM: Peptidase family M50
YP_004999149.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; manually curated
YP_004999150.1	PFAM: Protein of unknown function (DUF3151)
YP_004999152.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
YP_004999153.1	PFAM: SNARE associated Golgi protein; manually curated
YP_004999154.1	PFAM: Na+/H+ antiporter 1; DSBA-like thioredoxin domain; TIGRFAM: Na+/H+ antiporter NhaA
YP_004999155.1	PFAM: Glycosyl hydrolase family 76
YP_004999156.1	PFAM: SpoU rRNA Methylase family
YP_004999158.1	PFAM: short chain dehydrogenase
YP_004999160.1	PFAM: AMP-binding enzyme
YP_004999161.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_004999162.1	PFAM: FAD binding domain in molybdopterin dehydrogenase
YP_004999163.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain
YP_004999164.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_004999165.1	PFAM: Multicopper oxidase
YP_004999167.1	PFAM: Protein of unknown function (DUF2910)
YP_004999168.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999170.1	PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain
YP_004999171.1	PFAM: Aldose 1-epimerase
YP_004999173.1	PFAM: MerR family regulatory protein
YP_004999174.1	PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_004999175.1	PFAM: GrpE
YP_004999176.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_004999177.1	PFAM: E1-E2 ATPase; Hemerythrin HHE cation binding domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_004999178.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03085 family protein; uncharacterized Actinobacterial protein TIGR03083
YP_004999180.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_004999183.1	PFAM: Dynamin family
YP_004999184.1	PFAM: Dynamin family
YP_004999187.1	PFAM: Hsp70 protein
YP_004999188.1	PFAM: Bacterial regulatory proteins, luxR family
YP_004999189.1	PFAM: Cysteine-rich domain
YP_004999190.1	PFAM: Aminotransferase class I and II
YP_004999192.1	PFAM: YibE/F-like protein
YP_004999193.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_004999195.1	PFAM: MDMPI C-terminal domain; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_004999196.1	PFAM: Cytochrome P450
YP_004999197.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999198.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_004999200.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_004999201.1	PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_004999203.1	PFAM: VIT family
YP_004999204.1	PFAM: Secretory lipase
YP_004999205.1	PFAM: Protein kinase domain; NHL repeat
YP_004999206.1	PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; FHA domain
YP_004999208.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_004999209.1	PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_004999211.1	PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_004999212.1	PFAM: GAF domain
YP_004999213.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004999215.1	PFAM: Stage II sporulation protein E (SpoIIE); MASE1
YP_004999216.1	PFAM: Domain of unknown function (DUF427)
YP_004999217.1	PFAM: Interferon-induced transmembrane protein
YP_004999218.1	PFAM: Protein of unknown function (DUF2752)
YP_004999219.1	PFAM: GMC oxidoreductase; FAD dependent oxidoreductase
YP_004999220.1	PFAM: Protein kinase domain
YP_004999221.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_004999222.1	PFAM: short chain dehydrogenase
YP_004999224.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_004999225.1	PFAM: AMP-binding enzyme
YP_004999226.1	PFAM: Class II Aldolase and Adducin N-terminal domain
YP_004999227.1	PFAM: Amidohydrolase
YP_004999229.1	PFAM: Hsp70 protein
YP_004999231.1	PFAM: L,D-transpeptidase catalytic domain
YP_004999232.1	PFAM: Diacylglycerol kinase catalytic domain; PAP2 superfamily
YP_004999233.1	PFAM: PAP2 superfamily
YP_004999236.1	PFAM: Domain of unknown function DUF222
YP_004999237.1	PFAM: Sulfatase
YP_004999238.1	PFAM: Stf0 sulphotransferase
YP_004999239.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_004999240.1	PFAM: Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit
YP_004999241.1	PFAM: Methyltransferase domain
YP_004999242.1	PFAM: Prolyl oligopeptidase family
YP_004999243.1	PFAM: Protein of unknown function (DUF2984); TIGRFAM: type VII secretion protein EccE
YP_004999244.1	PFAM: Subtilase family; TIGRFAM: type VII secretion-associated serine protease mycosin
YP_004999245.1	PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4; type VII secretion integral membrane protein EccD
YP_004999247.1	PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target
YP_004999249.1	PFAM: PPE family
YP_004999250.1	PFAM: PE family
YP_004999251.1	PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb; type VII secretion protein EccCa
YP_004999252.1	PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial
YP_004999253.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: type VII secretion AAA-ATPase EccA
YP_004999254.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004999255.1	PFAM: alpha/beta hydrolase fold
YP_004999256.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_004999258.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004999259.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999261.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004999262.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999265.1	PFAM: short chain dehydrogenase
YP_004999266.1	PFAM: AMP-binding enzyme
YP_004999267.1	PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain
YP_004999270.1	PFAM: Protein of unknown function (DUF901)
YP_004999271.1	PFAM: Helix-turn-helix
YP_004999272.1	PFAM: short chain dehydrogenase
YP_004999273.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03086 family protein; uncharacterized Actinobacterial protein TIGR03083
YP_004999274.1	PFAM: MarR family
YP_004999275.1	PFAM: Permease family
YP_004999277.1	PFAM: Protein of unknown function (DUF808)
YP_004999278.1	PFAM: FAD binding domain; manually curated
YP_004999279.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_004999280.1	PFAM: Major Facilitator Superfamily
YP_004999281.1	PFAM: LysE type translocator; TIGRFAM: L-lysine exporter
YP_004999282.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999283.1	PFAM: short chain dehydrogenase
YP_004999285.1	PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_004999286.1	PFAM: Periplasmic binding protein
YP_004999287.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_004999288.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein
YP_004999289.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_004999290.1	PFAM: Acetyltransferase (GNAT) family; manually curated
YP_004999291.1	PFAM: Transcriptional regulatory protein, C terminal; Uroporphyrinogen-III synthase HemD
YP_004999292.1	PFAM: CbiX
YP_004999293.1	PFAM: Copper/zinc superoxide dismutase (SODC)
YP_004999294.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_004999295.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_004999296.1	PFAM: Hsp20/alpha crystallin family
YP_004999300.1	PFAM: domain; FAD binding domain
YP_004999301.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004999303.1	PFAM: Flavin reductase like domain
YP_004999304.1	PFAM: Dihydrodipicolinate reductase, N-terminus; manually curated
YP_004999305.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999306.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004999307.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004999310.1	PFAM: Sulfate transporter family; Carbonic anhydrase
YP_004999311.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family
YP_004999312.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein
YP_004999313.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_004999314.1	PFAM: short chain dehydrogenase
YP_004999315.1	PFAM: MaoC like domain
YP_004999317.1	PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain
YP_004999318.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_004999319.1	PFAM: Lanthionine synthetase C-like protein; TIGRFAM: type 2 lantibiotic biosynthesis protein LanM
YP_004999321.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999322.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_004999324.1	PFAM: Protein of unknown function (DUF2613)
YP_004999325.1	PFAM: F5/8 type C domain; Domain of unknown function (DUF3367)
YP_004999326.1	PFAM: Phosphotriesterase family
YP_004999327.1	PFAM: AMP-binding enzyme
YP_004999329.1	PFAM: Acyltransferase family
YP_004999330.1	PFAM: Protein of unknown function (DUF3068)
YP_004999332.1	PFAM: Glycosyl transferases group 1; manually curated
YP_004999333.1	PFAM: Methyltransferase domain
YP_004999334.1	PFAM: Aldehyde dehydrogenase family
YP_004999336.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004999337.1	PFAM: RibD C-terminal domain
YP_004999339.1	PFAM: Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999340.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_004999341.1	PFAM: N-acetyltransferase
YP_004999343.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004999344.1	PFAM: Protein kinase domain
YP_004999345.1	PFAM: Acyltransferase
YP_004999346.1	PFAM: alpha/beta hydrolase fold
YP_004999347.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_004999348.1	PFAM: alpha/beta hydrolase fold
YP_004999349.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999351.1	PFAM: alpha/beta hydrolase fold; manually curated
YP_004999352.1	PFAM: Amidohydrolase family
YP_004999353.1	PFAM: CoA-transferase family III
YP_004999355.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999356.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_004999357.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004999358.1	PFAM: AMP-binding enzyme
YP_004999359.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; NB-ARC domain
YP_004999360.1	PFAM: Phosphoenolpyruvate carboxykinase
YP_004999363.1	PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; manually curated
YP_004999364.1	PFAM: Protein of unknown function DUF88
YP_004999365.1	PFAM: MMPL family
YP_004999367.1	PFAM: Domain of unknown function DUF20
YP_004999368.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_004999369.1	PFAM: Peptidase family M23
YP_004999370.1	PFAM: Protein of unknown function (DUF3054)
YP_004999371.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004999372.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004999375.1	PFAM: MMPL family
YP_004999381.1	PFAM: Peptidase family M13
YP_004999382.1	PFAM: L,D-transpeptidase catalytic domain
YP_004999383.1	PFAM: Uncharacterised BCR, COG1937
YP_004999384.1	PFAM: Domain of unknown function (DUF305)
YP_004999385.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_004999386.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004999389.1	PFAM: FAD binding domain
YP_004999390.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_004999391.1	PFAM: O-methyltransferase
YP_004999393.1	PFAM: Protein of unknown function (DUF2786)
YP_004999395.1	PFAM: Putative lysophospholipase
YP_004999396.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; Nuclear transport factor 2 (NTF2) domain; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02960 family; RNA polymerase sigma factor, sigma-70 family
YP_004999398.1	PFAM: MarR family
YP_004999399.1	PFAM: Pirin
YP_004999401.1	PFAM: Transglycosylase associated protein
YP_004999402.1	PFAM: Polyketide cyclase / dehydrase and lipid transport; manually curated
YP_004999404.1	PFAM: Fructosamine kinase
YP_004999405.1	PFAM: short chain dehydrogenase
YP_004999406.1	PFAM: Protein of unknown function (DUF732)
YP_004999407.1	PFAM: Protein of unknown function (DUF1275)
YP_004999410.1	PFAM: RDD family
YP_004999412.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999413.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999414.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999415.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999416.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999417.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_004999418.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_004999419.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_004999420.1	PFAM: AMP-binding enzyme
YP_004999421.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_004999422.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004999423.1	PFAM: Thioesterase superfamily
YP_004999425.1	PFAM: Methyltransferase domain
YP_004999426.1	PFAM: Bacterial regulatory proteins, luxR family; alpha/beta hydrolase fold
YP_004999427.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004999428.1	PFAM: Mechanosensitive ion channel
YP_004999429.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999430.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999432.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_004999433.1	PFAM: NAD(P) transhydrogenase beta subunit
YP_004999434.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999435.1	PFAM: alpha/beta hydrolase fold
YP_004999436.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004999437.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004999439.1	PFAM: Protein of unknown function (DUF1348)
YP_004999440.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; manually curated
YP_004999442.1	PFAM: Protein of unknown function (DUF456)
YP_004999443.1	PFAM: Methyltransferase domain
YP_004999444.1	TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II
YP_004999445.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004999446.1	PFAM: short chain dehydrogenase
YP_004999447.1	PFAM: Aldehyde dehydrogenase family
YP_004999448.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_004999449.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999450.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999452.1	PFAM: Fusaric acid resistance protein family
YP_004999453.1	PFAM: Pirin C-terminal cupin domain; Pirin
YP_004999454.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_004999455.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_004999456.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family
YP_004999457.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component; PTS system, fructose subfamily, IIA component
YP_004999458.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_004999459.1	PFAM: Subtilase family; TIGRFAM: type VII secretion-associated serine protease mycosin
YP_004999460.1	PFAM: Protein of unknown function (DUF2984); TIGRFAM: type VII secretion protein EccE
YP_004999461.1	PFAM: PPE family
YP_004999462.1	PFAM: Uncharacterised BCR, YbaB family COG0718
YP_004999463.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Protein of unknown function (DUF2470)
YP_004999464.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_004999465.1	PFAM: ABC transporter; TOBE domain
YP_004999466.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_004999467.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_004999468.1	PFAM: Bacterial extracellular solute-binding protein
YP_004999471.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999472.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv0121 family
YP_004999473.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004999474.1	PFAM: DUF218 domain
YP_004999477.1	PFAM: Pro-kumamolisin, activation domain
YP_004999479.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004999480.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004999481.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_004999482.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004999483.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_004999484.1	PFAM: Phosphoserine phosphatase RsbU, N-terminal domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_004999487.1	manually curated
YP_004999489.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_004999490.1	PFAM: Major Facilitator Superfamily
YP_004999492.1	PFAM: Protein of unknown function DUF58
YP_004999493.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_004999496.1	PFAM: O-methyltransferase
YP_004999499.1	PFAM: K+ potassium transporter
YP_004999500.1	PFAM: Domain of unknown function DUF222
YP_004999501.1	PFAM: GtrA-like protein
YP_004999502.1	PFAM: Rhomboid family
YP_004999503.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004999504.1	PFAM: Nitroreductase family
YP_004999507.1	PFAM: Beta-lactamase; manually curated; non-canonical start codon
YP_004999508.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004999509.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_004999510.1	PFAM: Glutamine cyclotransferase
YP_004999511.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA
YP_004999513.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_004999514.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004999515.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_004999516.1	PFAM: Nitroreductase family
YP_004999517.1	PFAM: NmrA-like family
YP_004999518.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999519.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_004999520.1	PFAM: Calcineurin-like phosphoesterase
YP_004999521.1	PFAM: Uncharacterized conserved protein (DUF2075)
YP_004999522.1	PFAM: NUDIX domain
YP_004999524.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_004999525.1	PFAM: Leucine carboxyl methyltransferase
YP_004999526.1	PFAM: HD domain
YP_004999527.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999528.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004999529.1	PFAM: CoA-transferase family III
YP_004999530.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_004999531.1	PFAM: Domain of unknown function (DUF3516); Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004999533.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_004999535.1	PFAM: Sugar (and other) transporter
YP_004999536.1	PFAM: Glycosyl hydrolases family 16
YP_004999537.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_004999538.1	PFAM: Methyltransferase domain
YP_004999539.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_004999540.1	PFAM: short chain dehydrogenase
YP_004999542.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_004999543.1	PFAM: Tautomerase enzyme
YP_004999544.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_004999549.1	PFAM: Protein of unknown function DUF58
YP_004999550.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_004999552.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_004999553.1	PFAM: Calcineurin-like phosphoesterase
YP_004999555.1	PFAM: Secreted repeat of unknown function
YP_004999556.1	PFAM: Amidase
YP_004999557.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004999559.1	PFAM: TENA/THI-4/PQQC family
YP_004999560.1	PFAM: TENA/THI-4/PQQC family
YP_004999561.1	PFAM: MaoC like domain
YP_004999562.1	PFAM: short chain dehydrogenase
YP_004999564.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004999566.1	PFAM: Dioxygenase; Catechol dioxygenase N terminus; TIGRFAM: catechol 1,2-dioxygenase, Actinobacterial
YP_004999567.1	PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase
YP_004999569.1	PFAM: Protein of unknown function (DUF1228)
YP_004999570.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family
YP_004999571.1	PFAM: short chain dehydrogenase
YP_004999572.1	TIGRFAM: conserved hypothetical protein
YP_004999573.1	PFAM: Cellulase (glycosyl hydrolase family 5)
YP_004999575.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03085 family protein; uncharacterized Actinobacterial protein TIGR03083
YP_004999576.1	PFAM: Phospholipase D Active site motif
YP_004999577.1	PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_004999578.1	PFAM: Isochorismatase family
YP_004999579.1	PFAM: short chain dehydrogenase
YP_004999582.1	PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein
YP_004999584.1	PFAM: Domain of unknown function (DUF1772)
YP_004999585.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999587.1	PFAM: Complex I intermediate-associated protein 30 (CIA30)
YP_004999588.1	PFAM: Domain of unknown function (DUF1906); manually curated
YP_004999590.1	PFAM: Protein of unknown function, DUF488
YP_004999591.1	PFAM: Protein of unknown function (DUF1295)
YP_004999593.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_004999594.1	PFAM: Catalase
YP_004999596.1	TIGRFAM: intein N-terminal splicing region; manually curated
YP_004999597.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; intein C-terminal splicing region
YP_004999598.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_004999599.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_004999600.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_004999601.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_004999602.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; TAP-like protein
YP_004999603.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_004999604.1	PFAM: Protein of unknown function (DUF2029)
YP_004999605.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase
YP_004999607.1	PFAM: Domain of unknown function (DUF1707)
YP_004999608.1	PFAM: Transcriptional regulator PadR-like family
YP_004999609.1	PFAM: Myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type
YP_004999610.1	PFAM: alpha/beta hydrolase fold
YP_004999611.1	PFAM: Bacterial protein of unknown function (DUF839)
YP_004999612.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2906 family
YP_004999613.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_004999614.1	PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004999615.1	PFAM: ABC transporter
YP_004999616.1	PFAM: MarR family
YP_004999618.1	PFAM: short chain dehydrogenase
YP_004999619.1	PFAM: Protein of unknown function (DUF559)
YP_004999620.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_004999621.1	PFAM: Probable lipoprotein LpqN
YP_004999623.1	PFAM: Uncharacterized ACR, COG1678; manually curated
YP_004999624.1	PFAM: Major Facilitator Superfamily
YP_004999625.1	PFAM: Wyosine base formation; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03084 family protein; uncharacterized Actinobacterial protein TIGR03083
YP_004999627.1	PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; tRNA adenylyltransferase
YP_004999628.1	PFAM: NUDIX domain; manually curated
YP_004999630.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_004999631.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004999633.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_004999634.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_004999635.1	PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase
YP_004999637.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_004999638.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004999639.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
YP_004999640.1	PFAM: R3H domain
YP_004999641.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain
YP_004999642.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_004999643.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_004999644.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated
YP_004999645.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_004999646.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_004999647.1	PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_004999648.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_004999649.1	PFAM: Protein of unknown function (DUF721)
YP_004999650.1	PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_004999651.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_004999652.1	PFAM: Transmembrane domain of unknown function (DUF3566)
YP_004999654.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; alpha/beta hydrolase fold
YP_004999655.1	PFAM: Protein of unknown function (DUF2562)
YP_004999656.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_004999657.1	PFAM: Protein of unknown function (DUF2581)
YP_004999658.1	PFAM: Uncharacterised protein family (UPF0233); manually curated
YP_004999659.1	PFAM: Bacterial protein of unknown function (DUF881); manually curated
YP_004999660.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_004999661.1	PFAM: Protein kinase domain; PASTA domain
YP_004999662.1	PFAM: Protein kinase domain
YP_004999663.1	PFAM: Penicillin binding protein transpeptidase domain
YP_004999664.1	PFAM: Cell cycle protein
YP_004999665.1	PFAM: Protein phosphatase 2C
YP_004999666.1	PFAM: FHA domain
YP_004999667.1	PFAM: Protein of unknown function (DUF2662); FHA domain
YP_004999668.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999669.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_004999670.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme; manually curated
YP_004999671.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_004999673.1	PFAM: Protein kinase domain
YP_004999674.1	PFAM: Protein of unknown function (DUF3705)
YP_004999676.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999677.1	PFAM: Pirin C-terminal cupin domain; Pirin; manually curated
YP_004999678.1	TIGRFAM: LPXTG-motif cell wall anchor domain; Deltaproteobacterial GC-motif protein sorting domain
YP_004999679.1	PFAM: Protein of unknown function DUF55
YP_004999680.1	PFAM: Protein kinase domain
YP_004999684.1	PFAM: MarR family
YP_004999685.1	PFAM: Carboxyl transferase domain
YP_004999686.1	PFAM: Transcription factor WhiB
YP_004999688.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004999690.1	PFAM: Protein of unknown function (DUF2580)
YP_004999692.1	manually curated
YP_004999693.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: type VII secretion AAA-ATPase EccA
YP_004999694.1	PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial
YP_004999695.1	PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCa
YP_004999696.1	PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb
YP_004999697.1	PFAM: PE family
YP_004999698.1	PFAM: PPE family
YP_004999699.1	PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target
YP_004999700.1	PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target
YP_004999701.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004999702.1	PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4; type VII secretion integral membrane protein EccD; manually curated
YP_004999703.1	PFAM: Protein of unknown function (DUF2580)
YP_004999706.1	PFAM: Polysaccharide deacetylase
YP_004999708.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_004999709.1	PFAM: TrkA-C domain; Sodium/hydrogen exchanger family
YP_004999710.1	PFAM: TrkA-N domain; TrkA-C domain
YP_004999711.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083; TIGR03086 family protein
YP_004999712.1	PFAM: Sulfate transporter family; STAS domain
YP_004999713.1	PFAM: Bacterial regulatory protein, arsR family
YP_004999714.1	PFAM: PHP domain
YP_004999715.1	PFAM: yiaA/B two helix domain
YP_004999716.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; manually curated
YP_004999717.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999718.1	PFAM: Flavin-binding monooxygenase-like
YP_004999719.1	PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy
YP_004999720.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TipAS antibiotic-recognition domain
YP_004999722.1	PFAM: Copper resistance protein D
YP_004999723.1	PFAM: Copper resistance protein CopC
YP_004999724.1	PFAM: Domain of unkown function (DUF1775)
YP_004999729.1	PFAM: Helix-turn-helix
YP_004999730.1	PFAM: Uncharacterized protein family UPF0016
YP_004999732.1	manually curated
YP_004999733.1	PFAM: Nickel-containing superoxide dismutase; TIGRFAM: superoxide dismutase, Ni
YP_004999735.1	PFAM: Rhodanese-like domain
YP_004999736.1	manually curated
YP_004999737.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_004999738.1	PFAM: Ferritin-like domain
YP_004999739.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_004999740.1	PFAM: CAAX amino terminal protease family
YP_004999742.1	PFAM: Prephenate dehydratase; ACT domain
YP_004999743.1	PFAM: Phosphoglycerate mutase family
YP_004999745.1	PFAM: Domain of unknown function (DUF1025)
YP_004999747.1	PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_004999749.1	PFAM: Rieske [2Fe-2S] domain
YP_004999750.1	PFAM: FtsK/SpoIIIE family
YP_004999751.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004999752.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004999753.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_004999754.1	PFAM: LGFP repeat; N-acetylmuramoyl-L-alanine amidase
YP_004999755.1	PFAM: GLTT repeat (6 copies)
YP_004999756.1	PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase
YP_004999757.1	PFAM: Glycosyl transferase family 2
YP_004999758.1	PFAM: PAP2 superfamily
YP_004999759.1	PFAM: UbiA prenyltransferase family
YP_004999762.1	PFAM: Putative esterase
YP_004999763.1	PFAM: Putative esterase
YP_004999764.1	PFAM: Protein of unknown function (DUF732)
YP_004999765.1	PFAM: Cutinase
YP_004999766.1	PFAM: AMP-binding enzyme
YP_004999767.1	PFAM: Phosphopantetheine attachment site; Thioesterase domain; Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_004999768.1	PFAM: Carboxyl transferase domain
YP_004999770.1	PFAM: Protein kinase domain
YP_004999771.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999772.1	PFAM: Mycobacterial cell wall arabinan synthesis protein
YP_004999773.1	PFAM: Mycobacterial cell wall arabinan synthesis protein
YP_004999774.1	PFAM: Mycobacterial cell wall arabinan synthesis protein
YP_004999775.1	PFAM: Arabinofuranosyltransferase N terminal; Arabinofuranosyltransferase A C terminal
YP_004999776.1	PFAM: short chain dehydrogenase
YP_004999777.1	PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain
YP_004999778.1	PFAM: Alpha/beta hydrolase of unknown function (DUF1023)
YP_004999780.1	PFAM: Protein of unknown function (DUF2580)
YP_004999781.1	PFAM: GtrA-like protein
YP_004999782.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; manually curated
YP_004999783.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_004999784.1	PFAM: Phosphotransferase enzyme family
YP_004999786.1	PFAM: Domain of unknown function DUF222
YP_004999787.1	PFAM: Integrase core domain
YP_004999788.1	PFAM: ABC-2 type transporter
YP_004999789.1	PFAM: Glycosyl transferase family 2
YP_004999790.1	PFAM: ABC transporter
YP_004999791.1	PFAM: Protein of unknown function (DUF2587)
YP_004999792.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily
YP_004999793.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family
YP_004999794.1	PFAM: MarR family
YP_004999795.1	PFAM: Predicted membrane protein (DUF2319)
YP_004999797.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_004999799.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083; TIGR03086 family protein
YP_004999801.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_004999802.1	PFAM: DoxX
YP_004999803.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_004999804.1	PFAM: Rieske [2Fe-2S] domain
YP_004999805.1	TIGRFAM: phosphoesterase, MJ0936 family
YP_004999806.1	PFAM: Protein of unknown function (DUF419)
YP_004999807.1	PFAM: short chain dehydrogenase
YP_004999808.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999809.1	PFAM: Bacterial-like globin
YP_004999810.1	PFAM: short chain dehydrogenase
YP_004999811.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2248)
YP_004999812.1	PFAM: Phosphoglycerate mutase family; manually curated
YP_004999813.1	PFAM: Phosphotransferase enzyme family
YP_004999814.1	PFAM: Protein of unknown function (DUF1049)
YP_004999815.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_004999816.1	PFAM: ABC transporter
YP_004999817.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_004999818.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_004999819.1	PFAM: Protein of unknown function (DUF1089); manually curated
YP_004999820.1	PFAM: Prephenate dehydrogenase
YP_004999821.1	TIGRFAM: putative tRNA adenosine deaminase-associated protein
YP_004999822.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_004999823.1	PFAM: Protein of unknown function (DUF732)
YP_004999824.1	PFAM: GAF domain; Phytochrome region; Stage II sporulation protein E (SpoIIE); PAS fold
YP_004999826.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004999827.1	PFAM: Sulfotransferase domain
YP_004999828.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999829.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004999830.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_004999831.1	PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE)
YP_004999832.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain
YP_004999833.1	PFAM: Response regulator receiver domain
YP_004999834.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004999836.1	PFAM: Protein of unknown function (DUF732)
YP_004999837.1	PFAM: Mycobacterium 19 kDa lipoprotein antigen
YP_004999838.1	PFAM: Mycobacterium 19 kDa lipoprotein antigen
YP_004999839.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_004999840.1	PFAM: Flavin containing amine oxidoreductase
YP_004999841.1	PFAM: Integrase core domain
YP_004999842.1	PFAM: ABC transporter
YP_004999843.1	PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004999845.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase
YP_004999846.1	PFAM: Major Facilitator Superfamily
YP_004999848.1	PFAM: FAD binding domain
YP_004999849.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region
YP_004999850.1	PFAM: Mycobacterium membrane protein
YP_004999851.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_004999852.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999853.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_004999854.1	PFAM: Beta-eliminating lyase
YP_004999855.1	PFAM: FAD dependent oxidoreductase
YP_004999856.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_004999858.1	manually curated
YP_004999859.1	PFAM: Predicted membrane protein (DUF2078)
YP_004999860.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_004999861.1	PFAM: Bacterial regulatory protein, arsR family
YP_004999862.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region
YP_004999863.1	PFAM: Phage integrase family
YP_004999864.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; manually curated
YP_004999865.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region
YP_004999866.1	PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain
YP_004999867.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004999868.1	PFAM: Cutinase
YP_004999870.1	PFAM: Protein kinase domain
YP_004999873.1	PFAM: Beta-lactamase
YP_004999874.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_004999875.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_004999876.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_004999878.1	PFAM: Aminotransferase class I and II
YP_004999879.1	PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau
YP_004999880.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004999881.1	PFAM: FAD binding domain
YP_004999882.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004999883.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_004999884.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_004999885.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_004999887.1	PFAM: CobB/CobQ-like glutamine amidotransferase domain
YP_004999888.1	PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain
YP_004999889.1	PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_004999890.1	PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_004999891.1	PFAM: Cupin domain; Helix-turn-helix
YP_004999892.1	PFAM: FAD dependent oxidoreductase
YP_004999893.1	PFAM: Conserved region in glutamate synthase
YP_004999894.1	PFAM: GXGXG motif
YP_004999895.1	PFAM: Glutamine amidotransferases class-II
YP_004999896.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type III
YP_004999897.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_004999899.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_004999900.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_004999903.1	PFAM: Catalase; Catalase-related immune-responsive
YP_004999904.1	PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase
YP_004999907.1	PFAM: Catalase; Catalase-related immune-responsive
YP_004999908.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily
YP_004999910.1	PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase family protein; glutamate--cysteine ligase, plant type
YP_004999911.1	PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein
YP_004999912.1	TIGRFAM: TIGR03442 family protein
YP_004999913.1	PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase
YP_004999914.1	PFAM: Aminotransferase class-V
YP_004999915.1	PFAM: Methyltransferase domain
YP_004999918.1	PFAM: Methyltransferase domain
YP_004999919.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_004999920.1	PFAM: Aldo/keto reductase family
YP_004999921.1	PFAM: Transcriptional regulator PadR-like family
YP_004999922.1	manually curated
YP_004999923.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_004999924.1	PFAM: RDD family
YP_004999925.1	PFAM: Integral membrane protein DUF95
YP_004999926.1	PFAM: Protein of unknown function DUF58
YP_004999927.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_004999931.1	PFAM: Yqey-like protein
YP_004999932.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family
YP_004999935.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK-related putative methylase
YP_004999936.1	PFAM: Iron-binding zinc finger CDGSH type
YP_004999939.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_004999940.1	PFAM: Calcineurin-like phosphoesterase
YP_004999941.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; PASTA domain
YP_004999942.1	PFAM: Transcription factor WhiB
YP_004999943.1	PFAM: Anion-transporting ATPase
YP_004999944.1	PFAM: Anion-transporting ATPase
YP_004999946.1	PFAM: Endoribonuclease L-PSP
YP_004999947.1	PFAM: Metallo-beta-lactamase superfamily
YP_004999948.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_004999950.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_004999951.1	PFAM: Redoxin
YP_004999952.1	PFAM: NUDIX domain
YP_004999953.1	PFAM: Trypsin; Colicin V production protein
YP_004999954.1	PFAM: alpha/beta hydrolase fold; manually curated
YP_004999955.1	PFAM: Protein of unknown function (DUF1469)
YP_004999957.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_004999960.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_004999961.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: helicase/secretion neighborhood CpaE-like protein
YP_004999962.1	PFAM: Type II/IV secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase
YP_004999964.1	PFAM: Bacterial type II secretion system protein F domain
YP_004999967.1	TIGRFAM: helicase/secretion neighborhood TadE-like protein
YP_004999969.1	PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; TIGRFAM: helicase/secretion neighborhood putative DEAH-box helicase
YP_004999970.1	PFAM: 'Cold-shock' DNA-binding domain
YP_004999972.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_004999973.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_004999974.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit
YP_004999975.1	PFAM: Carboxymuconolactone decarboxylase family
YP_004999977.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_004999978.1	PFAM: Amidohydrolase family
YP_004999979.1	PFAM: Bacterial regulatory proteins, tetR family
YP_004999981.1	PFAM: Peptidase family M1
YP_004999982.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain
YP_004999983.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_004999985.1	PFAM: Beta-lactamase
YP_004999988.1	PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase
YP_004999989.1	PFAM: Inorganic pyrophosphatase
YP_004999990.1	TIGRFAM: VCBS repeat
YP_004999991.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
YP_004999992.1	PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase; uncharacterized protein, coenzyme F420 biosynthesis associated
YP_004999993.1	PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_004999994.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_004999995.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_004999996.1	PFAM: Protein of unknown function (DUF541)
YP_004999997.1	PFAM: alpha/beta hydrolase fold
YP_004999998.1	PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_004999999.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_005000000.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005000001.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_005000002.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_005000003.1	PFAM: Protein of unknown function (DUF3180)
YP_005000005.1	PFAM: Domain of unknown function (DUF2520); Rossmann-like domain
YP_005000006.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain
YP_005000007.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_005000008.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_005000009.1	PFAM: Alanine racemase, N-terminal domain
YP_005000010.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_005000011.1	PFAM: Lsr2
YP_005000012.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_005000013.1	PFAM: Probable cobalt transporter subunit (CbtB); TIGRFAM: cobalt transporter subunit CbtB (proposed)
YP_005000014.1	PFAM: Probable cobalt transporter subunit (CbtA)
YP_005000015.1	PFAM: Phosphoglycerate mutase family
YP_005000016.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005000017.1	PFAM: Antibiotic biosynthesis monooxygenase; manually curated
YP_005000018.1	PFAM: alpha/beta hydrolase fold; manually curated
YP_005000020.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005000021.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; alpha/beta hydrolase fold
YP_005000022.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase
YP_005000023.1	PFAM: Carbonic anhydrase; manually curated
YP_005000025.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region
YP_005000026.1	PFAM: KaiC; TIGRFAM: DNA repair protein RadA
YP_005000028.1	PFAM: CarD-like/TRCF domain
YP_005000029.1	PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_005000030.1	PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_005000031.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005000032.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005000033.1	PFAM: Arsenical pump membrane protein
YP_005000035.1	PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain
YP_005000036.1	PFAM: LamB/YcsF family
YP_005000037.1	PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; manually curated
YP_005000038.1	PFAM: Rhodanese-like domain
YP_005000039.1	PFAM: ABC 3 transport family
YP_005000040.1	PFAM: ABC transporter
YP_005000041.1	PFAM: Periplasmic solute binding protein family
YP_005000042.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005000043.1	manually curated
YP_005000044.1	PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_005000045.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000046.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000048.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005000049.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000050.1	PFAM: alpha/beta hydrolase fold
YP_005000051.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 2,3-dihydroxybiphenyl 1,2-dioxygenase
YP_005000052.1	PFAM: Flavin reductase like domain
YP_005000055.1	PFAM: Putative lysophospholipase
YP_005000057.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005000058.1	PFAM: Sugar (and other) transporter
YP_005000059.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase
YP_005000060.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase
YP_005000061.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005000062.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_005000063.1	PFAM: Domain of unknown function (DUF1942)
YP_005000064.1	PFAM: Aminotransferase class I and II
YP_005000066.1	PFAM: alpha/beta hydrolase fold
YP_005000067.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000068.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000069.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000070.1	PFAM: AMP-binding enzyme
YP_005000071.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000072.1	PFAM: short chain dehydrogenase
YP_005000073.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000074.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005000075.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005000076.1	PFAM: alpha/beta hydrolase fold
YP_005000077.1	PFAM: MMPL family; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; Transport protein
YP_005000078.1	PFAM: Condensation domain
YP_005000079.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005000080.1	PFAM: IclR helix-turn-helix domain; Response regulator receiver domain
YP_005000081.1	PFAM: 2-nitropropane dioxygenase
YP_005000083.1	PFAM: Coenzyme A transferase
YP_005000084.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000085.1	PFAM: short chain dehydrogenase
YP_005000086.1	PFAM: short chain dehydrogenase
YP_005000087.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005000088.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005000090.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005000091.1	PFAM: Cytochrome P450
YP_005000092.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000093.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000094.1	PFAM: DUF35 OB-fold domain
YP_005000097.1	PFAM: MaoC like domain
YP_005000098.1	PFAM: FAD binding domain
YP_005000099.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxopent-4-enoate hydratase
YP_005000100.1	PFAM: Semialdehyde dehydrogenase, NAD binding domain; Prokaryotic acetaldehyde dehydrogenase, dimerisation; TIGRFAM: acetaldehyde dehydrogenase (acetylating)
YP_005000101.1	PFAM: DmpG-like communication domain; HMGL-like; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase
YP_005000102.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_005000105.1	PFAM: IclR helix-turn-helix domain
YP_005000107.1	PFAM: short chain dehydrogenase
YP_005000108.1	PFAM: Sulfotransferase domain
YP_005000111.1	PFAM: Rieske [2Fe-2S] domain
YP_005000113.1	PFAM: MOSC N-terminal beta barrel domain; MOSC domain
YP_005000116.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005000117.1	PFAM: Glycoprotease family
YP_005000119.1	PFAM: DUF35 OB-fold domain
YP_005000120.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv3520c family
YP_005000121.1	PFAM: Acetoacetate decarboxylase (ADC)
YP_005000122.1	PFAM: Cytochrome P450
YP_005000123.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000124.1	PFAM: AMP-binding enzyme
YP_005000125.1	PFAM: 2-nitropropane dioxygenase
YP_005000126.1	PFAM: Probable lipoprotein LpqN
YP_005000128.1	PFAM: FAD dependent oxidoreductase
YP_005000129.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_005000130.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000131.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005000132.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005000133.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: glycosyltransferase, MGT family
YP_005000134.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000135.1	PFAM: AMP-binding enzyme
YP_005000136.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000137.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000138.1	PFAM: Protein of unknown function (DUF1271)
YP_005000139.1	PFAM: short chain dehydrogenase
YP_005000140.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000141.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000142.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000143.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000144.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000145.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000146.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000147.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000149.1	PFAM: Macrophage killing protein with similarity to conjugation protein
YP_005000150.1	PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]
YP_005000154.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000155.1	PFAM: short chain dehydrogenase
YP_005000156.1	PFAM: Domain of unknown function DUF222
YP_005000158.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005000159.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_005000160.1	PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_005000161.1	PFAM: Carbon monoxide dehydrogenase subunit G (CoxG)
YP_005000162.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_005000163.1	PFAM: XdhC and CoxI family
YP_005000164.1	PFAM: Cytochrome P450
YP_005000165.1	PFAM: D-ala-D-ala dipeptidase
YP_005000169.1	PFAM: Major Facilitator Superfamily
YP_005000170.1	PFAM: Zinc-binding dehydrogenase
YP_005000171.1	PFAM: Cutinase
YP_005000172.1	PFAM: short chain dehydrogenase
YP_005000173.1	PFAM: Cytochrome P450
YP_005000174.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000175.1	PFAM: Bacterial protein of unknown function (DUF885)
YP_005000177.1	PFAM: Cupin domain
YP_005000178.1	PFAM: Flavin containing amine oxidoreductase
YP_005000179.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000184.1	PFAM: Major Facilitator Superfamily
YP_005000186.1	PFAM: Putative cyclase
YP_005000187.1	PFAM: Domain of unknown function (DUF362)
YP_005000188.1	PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region
YP_005000189.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_005000190.1	PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein
YP_005000191.1	PFAM: Acetyltransferase (GNAT) family
YP_005000192.1	PFAM: AIR carboxylase
YP_005000193.1	PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein
YP_005000194.1	PFAM: AMP-binding enzyme
YP_005000195.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005000197.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase
YP_005000198.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_005000200.1	PFAM: ATP-grasp domain
YP_005000201.1	PFAM: D-ala D-ala ligase C-terminus
YP_005000202.1	PFAM: HNH endonuclease
YP_005000205.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005000206.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005000207.1	PFAM: HIT domain
YP_005000208.1	PFAM: short chain dehydrogenase; manually curated; non-canonical start codon
YP_005000209.1	PFAM: Nuclear transport factor 2 (NTF2) domain
YP_005000210.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005000212.1	PFAM: Protein of unknown function (DUF1271)
YP_005000213.1	PFAM: Cytochrome P450
YP_005000214.1	PFAM: short chain dehydrogenase
YP_005000215.1	PFAM: Cytochrome P450
YP_005000216.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000217.1	PFAM: Aldehyde dehydrogenase family
YP_005000218.1	PFAM: short chain dehydrogenase
YP_005000219.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005000220.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005000222.1	PFAM: Cytochrome P450
YP_005000223.1	manually curated
YP_005000224.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005000225.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000226.1	PFAM: Cytochrome P450
YP_005000227.1	PFAM: Amidinotransferase; manually curated
YP_005000228.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_005000229.1	PFAM: Putative esterase
YP_005000230.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000231.1	PFAM: short chain dehydrogenase
YP_005000232.1	PFAM: Amino acid permease
YP_005000233.1	PFAM: Protein of unknown function (DUF429)
YP_005000234.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_005000235.1	PFAM: Cytochrome P450
YP_005000236.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein
YP_005000240.1	PFAM: Protein of unknown function (DUF2580)
YP_005000241.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_005000242.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: trehalose synthase-fused probable maltokinase
YP_005000244.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000246.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_005000247.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000248.1	PFAM: Isochorismatase family
YP_005000253.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005000255.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000260.1	PFAM: Flavin reductase like domain
YP_005000261.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_005000262.1	PFAM: Protein of unknown function (DUF3224)
YP_005000263.1	PFAM: Glycosyl transferases group 1
YP_005000264.1	PFAM: Methyltransferase domain
YP_005000267.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000268.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000269.1	PFAM: Cytochrome P450
YP_005000270.1	PFAM: Cytochrome P450
YP_005000272.1	PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase
YP_005000274.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005000275.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005000276.1	PFAM: short chain dehydrogenase
YP_005000277.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005000278.1	PFAM: Amidohydrolase
YP_005000279.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family; manually curated
YP_005000281.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000282.1	PFAM: FHA domain
YP_005000283.1	PFAM: Protein kinase domain
YP_005000284.1	PFAM: GATA-type transcription activator, N-terminal
YP_005000287.1	PFAM: FAD dependent oxidoreductase
YP_005000288.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000289.1	PFAM: Domain of unknown function (DUF427)
YP_005000291.1	PFAM: Ferritin-like domain
YP_005000292.1	PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins
YP_005000293.1	PFAM: Cupin
YP_005000294.1	PFAM: Thioesterase superfamily
YP_005000295.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000296.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_005000297.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit
YP_005000299.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005000300.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_005000301.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000302.1	PFAM: Glutathione peroxidase
YP_005000304.1	PFAM: FAD binding domain
YP_005000306.1	PFAM: Metallo-beta-lactamase superfamily; manually curated; non-canonical start codon
YP_005000307.1	PFAM: Transposase, Mutator family
YP_005000309.1	PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; manually curated
YP_005000310.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_005000311.1	PFAM: Integrase core domain
YP_005000312.1	PFAM: Protein of unknown function (DUF2580)
YP_005000315.1	PFAM: Encapsulating protein for peroxidase
YP_005000316.1	PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family
YP_005000317.1	PFAM: Aminopeptidase I zinc metalloprotease (M18)
YP_005000320.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_005000321.1	PFAM: SnoaL-like polyketide cyclase
YP_005000323.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_005000324.1	PFAM: Predicted membrane protein (DUF2319)
YP_005000325.1	PFAM: CAAX amino terminal protease family
YP_005000326.1	PFAM: short chain dehydrogenase
YP_005000327.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000329.1	PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_005000330.1	PFAM: NmrA-like family
YP_005000331.1	PFAM: Cupin domain
YP_005000332.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_005000333.1	PFAM: Protein of unknown function (DUF3073)
YP_005000334.1	PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ
YP_005000335.1	PFAM: Aminotransferase class IV
YP_005000336.1	PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; Cyclic nucleotide-binding domain
YP_005000338.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; FHA domain
YP_005000342.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005000345.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005000356.1	PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: TIGR02391 family protein
YP_005000359.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005000361.1	PFAM: Domain of unknown function (DUF1794)
YP_005000363.1	PFAM: Protein of unknown function (DUF1416)
YP_005000364.1	PFAM: Rhodanese-like domain
YP_005000366.1	PFAM: Thioredoxin
YP_005000368.1	PFAM: Transcriptional regulatory protein, C terminal
YP_005000369.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol synthase
YP_005000370.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_005000371.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_005000372.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005000373.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005000374.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005000375.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_005000376.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; manually curated; non-canonical start codon
YP_005000377.1	PFAM: Fatty acid desaturase
YP_005000381.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236); manually curated
YP_005000382.1	PFAM: Protein of unknown function (DUF2510)
YP_005000383.1	PFAM: Amidohydrolase
YP_005000384.1	PFAM: short chain dehydrogenase
YP_005000385.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005000386.1	PFAM: Metallo-beta-lactamase superfamily
YP_005000387.1	PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related
YP_005000388.1	PFAM: Protein of unknown function (DUF2834)
YP_005000389.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000390.1	PFAM: Thi4 family
YP_005000391.1	PFAM: Domain of unknown function DUF222
YP_005000392.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005000394.1	PFAM: Zn-finger in ubiquitin-hydrolases and other protein
YP_005000395.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000396.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000397.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000398.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000399.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000400.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000401.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000402.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000404.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000405.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000406.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000407.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005000408.1	PFAM: CoA-transferase family III
YP_005000409.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000410.1	PFAM: Aminotransferase class I and II
YP_005000411.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005000412.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005000413.1	PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_005000414.1	PFAM: AMP-binding enzyme
YP_005000415.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005000417.1	PFAM: Amidase
YP_005000418.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_005000421.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_005000424.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_005000425.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_005000426.1	PFAM: MoaE protein
YP_005000427.1	PFAM: Transglycosylase-like domain
YP_005000428.1	PFAM: ThiS family
YP_005000429.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_005000430.1	PFAM: Domain of unknown function (DUF307)
YP_005000431.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005000432.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_005000433.1	PFAM: Protein of unknown function (DUF2771)
YP_005000434.1	PFAM: Major Facilitator Superfamily
YP_005000435.1	PFAM: Protein of unknown function (DUF3027)
YP_005000436.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000437.1	PFAM: Protein of unknown function (DUF2530)
YP_005000438.1	PFAM: SpoU rRNA Methylase family
YP_005000439.1	PFAM: Protein of unknown function (DUF2537)
YP_005000440.1	PFAM: Protein of unknown function (DUF3071)
YP_005000441.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, putative
YP_005000442.1	PFAM: Cysteine-rich secretory protein family
YP_005000443.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005000444.1	PFAM: P-aminobenzoate N-oxygenase AurF
YP_005000445.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain
YP_005000446.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005000448.1	PFAM: Glycosyl hydrolases family 16
YP_005000449.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_005000450.1	PFAM: Citrate synthase
YP_005000451.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_005000452.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_005000453.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000454.1	PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type)
YP_005000455.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005000456.1	PFAM: MarR family
YP_005000457.1	PFAM: Thi4 family; manually curated; non-canonical start codon
YP_005000458.1	PFAM: Protein of unknown function (DUF2630)
YP_005000459.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_005000460.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005000461.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005000462.1	PFAM: Phospholipase D Active site motif
YP_005000463.1	PFAM: Chromate transporter
YP_005000464.1	PFAM: Chromate transporter
YP_005000465.1	PFAM: Ion transport protein
YP_005000466.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005000467.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005000469.1	PFAM: alpha/beta hydrolase fold; Epoxide hydrolase N terminus
YP_005000470.1	PFAM: AMP-binding enzyme
YP_005000472.1	PFAM: FAD binding domain
YP_005000473.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000476.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_005000478.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000480.1	PFAM: Beta-lactamase; Domain of unknown function (DUF3471)
YP_005000481.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000483.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005000485.1	PFAM: ERG2 and Sigma1 receptor like protein
YP_005000486.1	PFAM: Cytochrome P450
YP_005000488.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005000489.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005000490.1	PFAM: Cytochrome P450
YP_005000494.1	PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal
YP_005000497.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000499.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000500.1	PFAM: short chain dehydrogenase
YP_005000501.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005000502.1	PFAM: NmrA-like family
YP_005000503.1	PFAM: AMP-binding enzyme
YP_005000504.1	PFAM: short chain dehydrogenase
YP_005000505.1	PFAM: AMP-binding enzyme
YP_005000506.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005000507.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_005000508.1	PFAM: short chain dehydrogenase
YP_005000509.1	PFAM: Rieske [2Fe-2S] domain
YP_005000510.1	PFAM: Flavin-binding monooxygenase-like
YP_005000511.1	PFAM: short chain dehydrogenase
YP_005000512.1	PFAM: CoA-transferase family III
YP_005000513.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000514.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005000515.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005000516.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000517.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000518.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005000519.1	PFAM: Aldehyde dehydrogenase family
YP_005000520.1	PFAM: Protein of unknown function (DUF1330)
YP_005000521.1	PFAM: Amidohydrolase
YP_005000523.1	PFAM: short chain dehydrogenase
YP_005000526.1	PFAM: Integrase core domain
YP_005000529.1	PFAM: Helix-turn-helix; manually curated
YP_005000538.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005000539.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000541.1	PFAM: Heavy-metal-associated domain
YP_005000542.1	PFAM: Methyltransferase domain
YP_005000544.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005000545.1	PFAM: Major Facilitator Superfamily
YP_005000546.1	PFAM: L,D-transpeptidase catalytic domain
YP_005000547.1	PFAM: NlpC/P60 family
YP_005000548.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005000549.1	PFAM: L,D-transpeptidase catalytic domain
YP_005000550.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; YHS domain
YP_005000552.1	PFAM: L,D-transpeptidase catalytic domain
YP_005000555.1	PFAM: NlpC/P60 family
YP_005000556.1	PFAM: NlpC/P60 family
YP_005000557.1	PFAM: Domain of unknown function (DUF305)
YP_005000559.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005000560.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005000562.1	PFAM: Multicopper oxidase
YP_005000563.1	PFAM: NlpC/P60 family
YP_005000565.1	PFAM: Redoxin
YP_005000566.1	PFAM: Penicillinase repressor
YP_005000567.1	PFAM: Peptidase family M48
YP_005000569.1	PFAM: L,D-transpeptidase catalytic domain
YP_005000570.1	PFAM: Penicillinase repressor
YP_005000571.1	PFAM: Peptidase family M48
YP_005000572.1	PFAM: Putative esterase
YP_005000573.1	PFAM: Peptidase family M23
YP_005000575.1	PFAM: tRNA Pseudouridine synthase II, C terminal; Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005000577.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated
YP_005000578.1	PFAM: Transglycosylase-like domain
YP_005000579.1	PFAM: Cupin domain
YP_005000580.1	PFAM: Protein of unknown function (DUF2752)
YP_005000582.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_005000583.1	PFAM: Major Facilitator Superfamily
YP_005000586.1	PFAM: Prolipoprotein diacylglyceryl transferase
YP_005000588.1	PFAM: Domain of Unknown Function (DUF326)
YP_005000589.1	PFAM: Uncharacterised BCR, COG1937
YP_005000590.1	PFAM: YHS domain
YP_005000591.1	PFAM: Heavy-metal-associated domain
YP_005000592.1	PFAM: Domain of unknown function (DUF1942)
YP_005000594.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005000596.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000597.1	PFAM: Domain of unknown function (DUF305)
YP_005000599.1	PFAM: Predicted membrane protein (DUF2078)
YP_005000600.1	PFAM: Rhodanese-like domain
YP_005000601.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein
YP_005000602.1	PFAM: PAP2 superfamily
YP_005000603.1	PFAM: Protein kinase domain; PAP2 superfamily; Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_005000605.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005000606.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000607.1	PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_005000609.1	PFAM: Uncharacterised BCR, COG1937
YP_005000610.1	PFAM: Heavy-metal-associated domain
YP_005000611.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005000612.1	PFAM: Methyltransferase domain
YP_005000615.1	PFAM: NUDIX domain
YP_005000616.1	PFAM: ABC1 family
YP_005000617.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase
YP_005000619.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_005000620.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_005000622.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005000624.1	PFAM: ABC transporter
YP_005000625.1	PFAM: Protein of unknown function (DUF2933)
YP_005000626.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005000627.1	PFAM: AhpC/TSA family
YP_005000630.1	PFAM: Methyltransferase domain
YP_005000631.1	PFAM: Copper resistance protein CopC; Copper resistance protein D
YP_005000632.1	PFAM: Penicillinase repressor
YP_005000633.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005000635.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005000636.1	PFAM: NlpC/P60 family; manually curated
YP_005000638.1	PFAM: Bacterial regulatory protein, arsR family
YP_005000639.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005000641.1	PFAM: Bacterial regulatory protein, arsR family
YP_005000642.1	PFAM: Major intrinsic protein
YP_005000643.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005000644.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005000645.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Hg(II)-responsive transcriptional regulator
YP_005000647.1	PFAM: Alkylmercury lyase
YP_005000648.1	manually curated
YP_005000649.1	PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein
YP_005000652.1	PFAM: Divergent AAA domain
YP_005000663.1	TIGRFAM: CRISPR type AFERR-associated protein Csf3
YP_005000666.1	manually curated
YP_005000670.1	PFAM: Phosphoadenosine phosphosulfate reductase family
YP_005000675.1	manually curated
YP_005000676.1	PFAM: Predicted membrane protein (DUF2078)
YP_005000677.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005000678.1	PFAM: Bacterial regulatory protein, arsR family
YP_005000679.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region
YP_005000680.1	PFAM: Phage integrase family
YP_005000681.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005000685.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus
YP_005000686.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family
YP_005000687.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005000688.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family
YP_005000690.1	PFAM: Phage integrase family
YP_005000691.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; manually curated
YP_005000692.1	PFAM: Transposase, Mutator family
YP_005000693.1	PFAM: Transposase, Mutator family; manually curated
YP_005000695.1	PFAM: Phage integrase family
YP_005000696.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005000697.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_005000698.1	PFAM: Fatty acid desaturase; manually curated
YP_005000701.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005000702.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_005000703.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus
YP_005000705.1	PFAM: (2R)-phospho-3-sulfolactate synthase (ComA)
YP_005000706.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005000707.1	PFAM: short chain dehydrogenase
YP_005000708.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005000709.1	PFAM: ABC transporter
YP_005000710.1	PFAM: DJ-1/PfpI family
YP_005000712.1	PFAM: Transposase; manually curated
YP_005000713.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_005000716.1	PFAM: Coenzyme A transferase
YP_005000717.1	PFAM: Coenzyme A transferase
YP_005000719.1	PFAM: Cobalamin-independent synthase, Catalytic domain
YP_005000721.1	PFAM: Methane/Phenol/Toluene Hydroxylase
YP_005000722.1	PFAM: MmoB/DmpM family; manually curated
YP_005000723.1	PFAM: Methane/Phenol/Toluene Hydroxylase
YP_005000724.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005000727.1	PFAM: short chain dehydrogenase
YP_005000728.1	PFAM: Transcription factor WhiB
YP_005000730.1	PFAM: Phage integrase family
YP_005000731.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005000737.1	PFAM: Phage integrase family
YP_005000738.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; manually curated
YP_005000739.1	PFAM: Transposase, Mutator family
YP_005000741.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005000742.1	PFAM: Aldehyde dehydrogenase family
YP_005000743.1	PFAM: Secretory lipase
YP_005000744.1	manually curated
YP_005000745.1	PFAM: Fatty acid desaturase
YP_005000749.1	manually curated
YP_005000751.1	PFAM: DJ-1/PfpI family
YP_005000753.1	PFAM: Adenylate kinase
YP_005000754.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000755.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000756.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000757.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000758.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000759.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000760.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000761.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000763.1	PFAM: RDD family
YP_005000767.1	PFAM: Aldehyde dehydrogenase family
YP_005000768.1	PFAM: Protein of unknown function (DUF779)
YP_005000769.1	manually curated
YP_005000771.1	PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein
YP_005000772.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005000773.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005000774.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme
YP_005000775.1	PFAM: Bacterial-like globin
YP_005000776.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005000777.1	PFAM: AMP-binding enzyme
YP_005000778.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005000779.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005000780.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005000781.1	PFAM: short chain dehydrogenase
YP_005000782.1	PFAM: RDD family
YP_005000783.1	PFAM: VWA domain containing CoxE-like protein
YP_005000784.1	PFAM: AAA domain (dynein-related subfamily)
YP_005000785.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005000786.1	PFAM: Bacterial regulatory protein, Fis family; manually curated
YP_005000787.1	PFAM: Aldehyde dehydrogenase family
YP_005000788.1	PFAM: AMP-binding enzyme
YP_005000790.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005000795.1	PFAM: Ammonia monooxygenase/methane monooxygenase, subunit C; TIGRFAM: methane monooxygenase/ammonia monooxygenase, subunit C
YP_005000796.1	PFAM: Ammonia monooxygenase; TIGRFAM: methane monooxygenase/ammonia monooxygenase, subunit A
YP_005000797.1	PFAM: Monooxygenase subunit B protein
YP_005000800.1	PFAM: RDD family
YP_005000801.1	manually curated
YP_005000802.1	PFAM: Transcriptional regulatory protein, C terminal
YP_005000804.1	PFAM: YHS domain; Methane/Phenol/Toluene Hydroxylase
YP_005000805.1	PFAM: Methane/Phenol/Toluene Hydroxylase
YP_005000806.1	PFAM: MmoB/DmpM family
YP_005000808.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005000809.1	PFAM: Methane monooxygenase, hydrolase gamma chain
YP_005000814.1	PFAM: Integrase core domain
YP_005000815.1	PFAM: Glycosyl transferase family 2; TIGRFAM: mycofactocin system glycosyltransferase
YP_005000816.1	PFAM: GMC oxidoreductase; TIGRFAM: dehydrogenase, Rv0697 family; manually curated
YP_005000817.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005000818.1	PFAM: FMN-dependent dehydrogenase; TIGRFAM: heme/flavin dehydrogenase, mycofactocin system
YP_005000819.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM peptide maturase, mycofactocin system; radical SAM additional 4Fe4S-binding domain
YP_005000820.1	TIGRFAM: mycofactocin system RPExFGAL protein; manually curated
YP_005000821.1	TIGRFAM: mycofactocin precursor
YP_005000822.1	PFAM: Methyltransferase domain
YP_005000823.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005000824.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005000825.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005000826.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005000827.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_005000828.1	manually curated
YP_005000830.1	PFAM: 56kDa selenium binding protein (SBP56)
YP_005000832.1	PFAM: Phage integrase family
YP_005000833.1	PFAM: Transposase, Mutator family
YP_005000834.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005000836.1	PFAM: Transposase, Mutator family
YP_005000837.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; manually curated
YP_005000838.1	PFAM: Phage integrase family
YP_005000840.1	PFAM: Phage integrase family
YP_005000845.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005000850.1	PFAM: S4 domain
YP_005000851.1	PFAM: Prokaryotic protein of unknown function (DUF849)
YP_005000852.1	PFAM: Cupin superfamily (DUF985)
YP_005000855.1	PFAM: Hsp20/alpha crystallin family
YP_005000856.1	PFAM: HxlR-like helix-turn-helix
YP_005000857.1	PFAM: Retinal pigment epithelial membrane protein
YP_005000858.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain
YP_005000859.1	PFAM: ANTAR domain
YP_005000862.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005000863.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase
YP_005000864.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase
YP_005000865.1	PFAM: ABC transporter; FHA domain; ABC-2 type transporter
YP_005000866.1	PFAM: Universal stress protein family
YP_005000868.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005000869.1	PFAM: Phage integrase family
YP_005000870.1	PFAM: Phage integrase family
YP_005000873.1	PFAM: short chain dehydrogenase
YP_005000874.1	PFAM: Rieske [2Fe-2S] domain
YP_005000876.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005000878.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005000879.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005000880.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005000882.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005000883.1	PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
YP_005000884.1	PFAM: Amidohydrolase
YP_005000885.1	PFAM: Cytochrome P450
YP_005000886.1	PFAM: Aldehyde dehydrogenase family
YP_005000887.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005000889.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005000890.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000891.1	PFAM: Ring hydroxylating beta subunit
YP_005000893.1	PFAM: short chain dehydrogenase
YP_005000894.1	PFAM: Protein of unknown function (DUF1271)
YP_005000895.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005000896.1	PFAM: Cupin domain; TIGRFAM: gentisate 1,2-dioxygenase
YP_005000897.1	PFAM: Dihydrodipicolinate synthetase family
YP_005000898.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 2,3-dihydroxybiphenyl 1,2-dioxygenase
YP_005000899.1	PFAM: SCP-2 sterol transfer family
YP_005000900.1	PFAM: Dihydrodipicolinate synthetase family
YP_005000902.1	PFAM: Ring hydroxylating beta subunit
YP_005000903.1	PFAM: domain; FAD binding domain
YP_005000905.1	PFAM: Aldehyde dehydrogenase family
YP_005000906.1	PFAM: Ring hydroxylating beta subunit
YP_005000907.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000908.1	PFAM: short chain dehydrogenase
YP_005000909.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005000910.1	PFAM: BNR/Asp-box repeat
YP_005000911.1	PFAM: Rieske [2Fe-2S] domain
YP_005000912.1	PFAM: Ring hydroxylating beta subunit
YP_005000913.1	PFAM: SCP-2 sterol transfer family
YP_005000914.1	PFAM: Dioxygenase
YP_005000915.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005000916.1	PFAM: Domain of unknown function DUF140
YP_005000917.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000918.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000919.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000920.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000921.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000922.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005000925.1	PFAM: alpha/beta hydrolase fold; Epoxide hydrolase N terminus
YP_005000926.1	PFAM: Aldehyde dehydrogenase family
YP_005000927.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein; manually curated
YP_005000928.1	PFAM: MarR family
YP_005000929.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000930.1	PFAM: Ring hydroxylating beta subunit
YP_005000931.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005000932.1	PFAM: CoA-transferase family III
YP_005000933.1	PFAM: Thiolase, C-terminal domain
YP_005000934.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain; manually curated
YP_005000936.1	PFAM: Protein of unknown function (DUF1271)
YP_005000937.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000938.1	PFAM: Ring hydroxylating beta subunit
YP_005000939.1	PFAM: Cupin domain
YP_005000940.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005000941.1	PFAM: MarR family
YP_005000942.1	PFAM: alpha/beta hydrolase fold; manually curated
YP_005000943.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000944.1	PFAM: Ring hydroxylating beta subunit
YP_005000945.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_005000946.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_005000948.1	PFAM: Class II Aldolase and Adducin N-terminal domain
YP_005000949.1	PFAM: short chain dehydrogenase
YP_005000950.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 2,3-dihydroxybiphenyl 1,2-dioxygenase
YP_005000951.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain
YP_005000952.1	PFAM: Ring hydroxylating beta subunit
YP_005000954.1	PFAM: Protein of unknown function (DUF1271)
YP_005000956.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005000957.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005000958.1	PFAM: Dihydrodipicolinate synthetase family
YP_005000960.1	PFAM: Cupin domain
YP_005000961.1	PFAM: MarR family
YP_005000963.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005000964.1	PFAM: Protocatechuate 3,4-dioxygenase beta subunit N terminal; Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit
YP_005000965.1	PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit
YP_005000966.1	PFAM: Lyase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase
YP_005000967.1	PFAM: Carboxymuconolactone decarboxylase family; alpha/beta hydrolase fold; TIGRFAM: 4-carboxymuconolactone decarboxylase; 3-oxoadipate enol-lactonase
YP_005000968.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit
YP_005000969.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit
YP_005000971.1	PFAM: Phage integrase family
YP_005000976.1	PFAM: Protein of unknown function (DUF433)
YP_005000981.1	PFAM: Universal stress protein family
YP_005000982.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005000983.1	PFAM: Universal stress protein family
YP_005000985.1	PFAM: Zeta toxin
YP_005000986.1	PFAM: Universal stress protein family
YP_005000987.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein
YP_005000988.1	PFAM: Nitroreductase family
YP_005000990.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005000992.1	manually curated
YP_005000993.1	PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_005000995.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; manually curated
YP_005000997.1	PFAM: Cytochrome c oxidase subunit III
YP_005000999.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2516 family
YP_005001000.1	PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: carboxylate-amine ligase, YbdK family
YP_005001001.1	PFAM: Anti-sigma-K factor rskA
YP_005001002.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005001003.1	PFAM: Protein of unknown function (DUF1295)
YP_005001004.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005001005.1	PFAM: Protein of unknown function (DUF1365)
YP_005001006.1	PFAM: Flavin containing amine oxidoreductase
YP_005001007.1	PFAM: Protein of unknown function (DUF867); AIG2-like family
YP_005001008.1	PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_005001012.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005001013.1	PFAM: short chain dehydrogenase
YP_005001014.1	PFAM: O-methyltransferase
YP_005001015.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001016.1	PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic
YP_005001017.1	PFAM: pfkB family carbohydrate kinase
YP_005001018.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_005001019.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005001020.1	PFAM: Sigma-70, region 4; Putative sugar-binding domain
YP_005001021.1	PFAM: Bacterial extracellular solute-binding protein
YP_005001022.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001023.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001024.1	PFAM: ABC transporter; TOBE domain
YP_005001025.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_005001026.1	PFAM: Domain of unknown function DUF222
YP_005001028.1	PFAM: ATP dependent DNA ligase domain; Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain
YP_005001029.1	PFAM: Protein kinase domain; Kelch motif
YP_005001030.1	PFAM: FHA domain
YP_005001032.1	PFAM: Linear amide C-N hydrolases, choloylglycine hydrolase family
YP_005001035.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005001036.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005001038.1	PFAM: Major Facilitator Superfamily
YP_005001040.1	PFAM: P-aminobenzoate N-oxygenase AurF
YP_005001041.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_005001042.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6A synthase (deacetylating)
YP_005001043.1	PFAM: Membrane protein of unknown function
YP_005001044.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_005001045.1	PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase, putative
YP_005001046.1	PFAM: short chain dehydrogenase; manually curated
YP_005001048.1	PFAM: Phosphoglucose isomerase
YP_005001049.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_005001050.1	PFAM: Acyltransferase family
YP_005001051.1	PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type
YP_005001052.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA
YP_005001053.1	manually curated
YP_005001054.1	PFAM: Peptidase family M23
YP_005001055.1	PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_005001056.1	PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_005001058.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005001059.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: dimethyl sulfone monooxygenase SfnG
YP_005001062.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_005001063.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_005001064.1	PFAM: Rho termination factor, N-terminal domain
YP_005001065.1	PFAM: Sigma-54 interaction domain
YP_005001068.1	PFAM: Domain of unknown function (DUF1707); manually curated
YP_005001069.1	PFAM: NmrA-like family
YP_005001070.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001071.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001072.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme
YP_005001073.1	PFAM: Carboxyl transferase domain
YP_005001074.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001075.1	PFAM: Protein of unknown function (DUF1446)
YP_005001076.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_005001077.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated
YP_005001078.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005001079.1	PFAM: Trypsin
YP_005001080.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_005001082.1	PFAM: MspA
YP_005001083.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_005001085.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_005001087.1	PFAM: Vitamin K-dependent gamma-carboxylase
YP_005001088.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_005001089.1	PFAM: Nucleotidyl transferase
YP_005001090.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_005001091.1	PFAM: Acetyltransferase (GNAT) family
YP_005001093.1	PFAM: Domain of unknown function (DUF1942)
YP_005001094.1	PFAM: AhpC/TSA family; Protein of unknown function (DUF742)
YP_005001096.1	PFAM: Protein of unknown function (DUF1232)
YP_005001097.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001098.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001099.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001100.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001101.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001102.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001103.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001104.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001108.1	PFAM: Phosphotransferase enzyme family
YP_005001109.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain
YP_005001110.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005001111.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_005001112.1	TIGRFAM: DNA polymerase LigD, polymerase domain
YP_005001113.1	PFAM: short chain dehydrogenase
YP_005001114.1	PFAM: Acetyltransferase (GNAT) family; Cyclic nucleotide-binding domain
YP_005001115.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_005001118.1	PFAM: Probable lipoprotein LpqN
YP_005001119.1	PFAM: PE-PPE domain
YP_005001124.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: redox-sensitive transcriptional activator SoxR
YP_005001125.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_005001126.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005001127.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_005001128.1	PFAM: chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade
YP_005001129.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02957 family
YP_005001130.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005001131.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005001132.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005001133.1	PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_005001134.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005001135.1	PFAM: Transglycosylase-like domain; Domain of unknown function (DUF348); G5 domain
YP_005001136.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; manually curated; non-canonical start codon
YP_005001137.1	PFAM: Protein kinase domain
YP_005001138.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; manually curated
YP_005001139.1	PFAM: AMP-binding enzyme
YP_005001140.1	PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_005001141.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005001142.1	PFAM: Phosphotransferase enzyme family
YP_005001143.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001147.1	PFAM: Cutinase
YP_005001148.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005001149.1	PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_005001150.1	PFAM: short chain dehydrogenase
YP_005001151.1	PFAM: Probable lipoprotein LpqN
YP_005001152.1	PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin)
YP_005001153.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_005001154.1	PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_005001155.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001156.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_005001158.1	PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_005001160.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_005001161.1	PFAM: Septum formation initiator
YP_005001162.1	PFAM: Protein of unknown function (DUF501)
YP_005001163.1	PFAM: Ppx/GppA phosphatase family
YP_005001168.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_005001169.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001170.1	PFAM: Rieske [2Fe-2S] domain
YP_005001171.1	PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_005001172.1	PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_005001173.1	PFAM: PaaX-like protein C-terminal domain; PaaX-like protein
YP_005001174.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme
YP_005001175.1	PFAM: alpha/beta hydrolase fold
YP_005001176.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005001177.1	PFAM: Domain of unknown function (DUF309)
YP_005001178.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005001179.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Osmosensitive K+ channel His kinase sensor domain; Universal stress protein family; His Kinase A (phosphoacceptor) domain
YP_005001180.1	PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit
YP_005001181.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit
YP_005001182.1	PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA
YP_005001183.1	PFAM: F subunit of K+-transporting ATPase (Potass_KdpF); TIGRFAM: K+-transporting ATPase, KdpF subunit; manually curated; non-canonical start codon
YP_005001184.1	PFAM: EamA-like transporter family
YP_005001187.1	PFAM: HNH endonuclease
YP_005001188.1	PFAM: GAF domain; ANTAR domain
YP_005001189.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005001190.1	PFAM: MerR family regulatory protein; manually curated
YP_005001191.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005001192.1	PFAM: HD domain
YP_005001193.1	PFAM: Nitroreductase family
YP_005001194.1	PFAM: Cupin domain
YP_005001197.1	PFAM: Stage II sporulation protein E (SpoIIE); MASE1
YP_005001202.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005001204.1	PFAM: Cutinase
YP_005001205.1	PFAM: DJ-1/PfpI family
YP_005001206.1	PFAM: Emopamil binding protein
YP_005001207.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005001208.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; manually curated
YP_005001209.1	PFAM: Major Facilitator Superfamily
YP_005001210.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005001211.1	PFAM: Rieske [2Fe-2S] domain
YP_005001212.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001215.1	PFAM: Beta-lactamase
YP_005001216.1	PFAM: Voltage gated chloride channel
YP_005001217.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005001218.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005001220.1	PFAM: Cytochrome D1 heme domain; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_005001221.1	PFAM: Response regulator receiver domain
YP_005001222.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005001223.1	PFAM: Sodium:dicarboxylate symporter family
YP_005001226.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain
YP_005001227.1	PFAM: Protein of unknown function (DUF732)
YP_005001228.1	PFAM: Protein kinase domain
YP_005001229.1	PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; FHA domain
YP_005001230.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005001231.1	PFAM: short chain dehydrogenase
YP_005001232.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005001233.1	PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase)
YP_005001234.1	PFAM: Patatin-like phospholipase
YP_005001235.1	PFAM: Patatin-like phospholipase
YP_005001237.1	PFAM: Cysteine dioxygenase type I
YP_005001238.1	PFAM: Rhodanese-like domain
YP_005001239.1	PFAM: Predicted membrane protein (DUF2319)
YP_005001240.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001241.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001242.1	PFAM: Uncharacterised protein family UPF0005
YP_005001244.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005001245.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005001246.1	PFAM: alpha/beta hydrolase fold
YP_005001247.1	PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase
YP_005001248.1	PFAM: Interferon-induced transmembrane protein
YP_005001249.1	PFAM: Predicted integral membrane protein (DUF2189); manually curated; non-canonical start codon
YP_005001250.1	PFAM: RDD family
YP_005001251.1	PFAM: RDD family
YP_005001252.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_005001254.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_005001256.1	PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca
YP_005001258.1	PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Protein of unknown function, DUF255
YP_005001259.1	PFAM: Nuclear transport factor 2 (NTF2) domain
YP_005001260.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_005001261.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; manually curated
YP_005001265.1	PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: pantothenate kinase, bacterial type
YP_005001267.1	PFAM: Serine hydroxymethyltransferase
YP_005001268.1	PFAM: Fatty acid desaturase
YP_005001269.1	PFAM: PhoH-like protein
YP_005001271.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005001272.1	PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II
YP_005001273.1	PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II
YP_005001275.1	PFAM: Dienelactone hydrolase family
YP_005001276.1	PFAM: Domain of unknown function DUF20
YP_005001277.1	PFAM: short chain dehydrogenase
YP_005001278.1	PFAM: short chain dehydrogenase
YP_005001279.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005001280.1	PFAM: Formylglycine-generating sulfatase enzyme
YP_005001282.1	PFAM: Sulfatase
YP_005001283.1	PFAM: Domain of unknown function (DUF1876)
YP_005001284.1	PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family
YP_005001285.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_005001286.1	PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_005001288.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_005001290.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_005001292.1	PFAM: Integrase core domain
YP_005001293.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005001296.1	PFAM: Cadmium resistance transporter
YP_005001297.1	PFAM: Acyltransferase family
YP_005001298.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005001302.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005001304.1	PFAM: Protein of unknown function (DUF732)
YP_005001305.1	PFAM: Limonene-1,2-epoxide hydrolase catalytic domain; TIGRFAM: conserved hypothetical protein
YP_005001306.1	PFAM: Aminotransferase class-III; Phosphotransferase enzyme family
YP_005001307.1	PFAM: alpha/beta hydrolase fold
YP_005001308.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001309.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_005001310.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005001311.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005001312.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001313.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001314.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001315.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001316.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001317.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001320.1	PFAM: alpha/beta hydrolase fold
YP_005001323.1	PFAM: DoxX
YP_005001324.1	PFAM: Transmembrane protein of unknown function (DUF3556)
YP_005001325.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005001326.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005001327.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001328.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001329.1	PFAM: Fasciclin domain
YP_005001330.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001331.1	PFAM: short chain dehydrogenase
YP_005001333.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005001334.1	PFAM: CAAX amino terminal protease family
YP_005001335.1	PFAM: Bacterial protein of unknown function (DUF894); TIGRFAM: H+ Antiporter protein
YP_005001336.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001337.1	PFAM: CoA-transferase family III
YP_005001338.1	PFAM: short chain dehydrogenase
YP_005001339.1	PFAM: 2-nitropropane dioxygenase
YP_005001341.1	PFAM: DoxX
YP_005001342.1	PFAM: MMPL family
YP_005001343.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001344.1	PFAM: Methyltransferase domain
YP_005001345.1	PFAM: Sir2 family
YP_005001346.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005001347.1	PFAM: Leucine carboxyl methyltransferase
YP_005001348.1	PFAM: Protein of unknown function (DUF1697)
YP_005001349.1	PFAM: Leucine carboxyl methyltransferase
YP_005001350.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_005001352.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family
YP_005001353.1	PFAM: Protein of unknown function, DUF485
YP_005001354.1	PFAM: Sodium:solute symporter family
YP_005001355.1	PFAM: Protein of unknown function, DUF485
YP_005001356.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005001357.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005001358.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: uncharacterized HhH-GPD family protein
YP_005001359.1	PFAM: Resolvase, N terminal domain
YP_005001360.1	PFAM: Nitroreductase family
YP_005001364.1	PFAM: Protein of unknown function (DUF2029)
YP_005001365.1	PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_005001366.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_005001368.1	PFAM: Cytochrome P450
YP_005001372.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; manually curated
YP_005001373.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005001374.1	PFAM: Voltage gated chloride channel
YP_005001375.1	PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- glucopyranoside deacetylase
YP_005001378.1	PFAM: Radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; radical SAM domain protein, CofH subfamily; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
YP_005001380.1	PFAM: YceI-like domain
YP_005001382.1	PFAM: 4Fe-4S binding domain
YP_005001383.1	PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase; manually curated
YP_005001384.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005001385.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005001386.1	PFAM: Retinal pigment epithelial membrane protein
YP_005001387.1	PFAM: Polyprenyl synthetase; manually curated
YP_005001388.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_005001389.1	PFAM: Squalene/phytoene synthase
YP_005001390.1	PFAM: ubiE/COQ5 methyltransferase family
YP_005001391.1	PFAM: Flavin containing amine oxidoreductase
YP_005001392.1	PFAM: Rieske [2Fe-2S] domain
YP_005001393.1	PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1
YP_005001395.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1
YP_005001396.1	PFAM: Proline dehydrogenase
YP_005001398.1	PFAM: NUDIX domain
YP_005001399.1	PFAM: AMP-binding enzyme
YP_005001401.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005001402.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_005001403.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase
YP_005001404.1	PFAM: ABC transporter
YP_005001408.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein
YP_005001409.1	PFAM: AMP-binding enzyme
YP_005001410.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005001411.1	PFAM: Glycosyl transferase family 2
YP_005001412.1	TIGRFAM: DivIVA domain
YP_005001413.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_005001414.1	PFAM: Protein of unknown function (DUF3117)
YP_005001415.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family
YP_005001416.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_005001419.1	PFAM: Integrase core domain
YP_005001420.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005001422.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_005001424.1	PFAM: ABC transporter
YP_005001425.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001426.1	PFAM: O-methyltransferase
YP_005001427.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005001429.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005001430.1	TIGRFAM: twin arginine-targeting protein translocase TatB
YP_005001431.1	PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; ATPase MipZ
YP_005001433.1	PFAM: Protein of unknown function (DUF1003)
YP_005001434.1	PFAM: MgtE intracellular N domain; CBS domain
YP_005001435.1	PFAM: HpcH/HpaI aldolase/citrate lyase family; manually curated
YP_005001440.1	PFAM: Bacterial extracellular solute-binding protein
YP_005001441.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001442.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001443.1	PFAM: ABC transporter
YP_005001444.1	PFAM: Suppressor of fused protein (SUFU)
YP_005001445.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_005001446.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase
YP_005001447.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005001448.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005001449.1	PFAM: short chain dehydrogenase
YP_005001450.1	PFAM: Dehydrogenase E1 component; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_005001452.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily
YP_005001453.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005001454.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_005001455.1	TIGRFAM: RecB family nuclease, putative, TM0106 family
YP_005001457.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_005001458.1	PFAM: Acyltransferase family
YP_005001459.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001460.1	PFAM: Cytochrome P450
YP_005001461.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_005001462.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005001463.1	PFAM: Major Facilitator Superfamily; TIGRFAM: H+ Antiporter protein
YP_005001464.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; manually curated
YP_005001465.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_005001466.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005001467.1	PFAM: HIT domain
YP_005001468.1	PFAM: Amidase
YP_005001470.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005001472.1	PFAM: Predicted membrane protein (DUF2078)
YP_005001474.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005001475.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_005001476.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005001478.1	PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein
YP_005001479.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_005001480.1	PFAM: Protein of unknown function (DUF2510); Protein of unknown function DUF124
YP_005001483.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005001484.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005001485.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005001486.1	PFAM: Protein of unknown function (DUF3558)
YP_005001487.1	PFAM: Protein of unknown function (DUF3558)
YP_005001488.1	PFAM: Phosphoglycerate mutase family
YP_005001490.1	PFAM: PepSY-associated TM helix
YP_005001491.1	PFAM: Calcineurin-like phosphoesterase
YP_005001493.1	PFAM: GMC oxidoreductase
YP_005001494.1	PFAM: Protein of unknown function (DUF1622)
YP_005001495.1	PFAM: alpha/beta hydrolase fold
YP_005001496.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005001497.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005001498.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001499.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001503.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005001504.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005001505.1	PFAM: Protein of unknown function (DUF2029)
YP_005001506.1	PFAM: GtrA-like protein; Glycosyl transferase family 2; manually curated
YP_005001508.1	PFAM: Carbonic anhydrase
YP_005001509.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_005001510.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit; small GTP-binding protein domain
YP_005001511.1	PFAM: Inositol monophosphatase family
YP_005001512.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005001513.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_005001514.1	PFAM: Alpha/beta hydrolase of unknown function (DUF1100)
YP_005001515.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_005001516.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005001517.1	PFAM: Acetyltransferase (GNAT) family
YP_005001518.1	PFAM: 2-nitropropane dioxygenase
YP_005001519.1	PFAM: FAD binding domain; Flavin containing amine oxidoreductase
YP_005001520.1	PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family
YP_005001521.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005001522.1	PFAM: Luciferase-like monooxygenase
YP_005001524.1	PFAM: short chain dehydrogenase
YP_005001526.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001527.1	PFAM: alpha/beta hydrolase fold
YP_005001528.1	PFAM: Protein of unknown function (DUF732)
YP_005001530.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_005001531.1	manually curated
YP_005001532.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005001533.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001534.1	PFAM: Isochorismatase family
YP_005001535.1	PFAM: LemA family
YP_005001536.1	PFAM: Peptidase family M48
YP_005001537.1	PFAM: Isochorismatase family
YP_005001540.1	PFAM: MTH538 TIR-like domain (DUF1863)
YP_005001541.1	PFAM: HIT domain
YP_005001545.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_005001546.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005001547.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_005001548.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005001549.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_005001550.1	PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_005001551.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001552.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005001553.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_005001554.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_005001555.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005001556.1	PFAM: Glycosyl transferase family 4
YP_005001557.1	PFAM: ATP synthase I chain
YP_005001558.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_005001559.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_005001560.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_005001561.1	PFAM: ATP synthase delta (OSCP) subunit; ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase, F0 subunit b
YP_005001562.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_005001563.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_005001564.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_005001565.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_005001566.1	PFAM: Protein of unknown function (DUF2550)
YP_005001567.1	PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_005001568.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005001569.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005001570.1	PFAM: Metal binding domain of Ada; AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein
YP_005001572.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_005001573.1	PFAM: Protein of unknown function DUF91
YP_005001574.1	manually curated
YP_005001575.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; manually curated
YP_005001576.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005001577.1	TIGRFAM: integral membrane protein
YP_005001578.1	PFAM: Thioredoxin
YP_005001579.1	PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_005001580.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF3416)
YP_005001581.1	PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases
YP_005001583.1	PFAM: MspA
YP_005001584.1	PFAM: Putative neutral zinc metallopeptidase
YP_005001585.1	PFAM: DEAD/DEAH box helicase; manually curated; non-canonical start codon
YP_005001586.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase
YP_005001587.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; manually curated
YP_005001588.1	PFAM: Domain of unknown function (DUF2017)
YP_005001589.1	PFAM: Peptidase family S58
YP_005001590.1	PFAM: Mov34/MPN/PAD-1 family
YP_005001591.1	PFAM: ThiS family
YP_005001592.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases
YP_005001593.1	PFAM: Rhomboid family
YP_005001594.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_005001595.1	PFAM: Metallo-beta-lactamase superfamily; manually curated
YP_005001596.1	PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_005001598.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_005001599.1	PFAM: Major Facilitator Superfamily
YP_005001600.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001601.1	PFAM: alpha/beta hydrolase fold
YP_005001602.1	TIGRFAM: integral membrane protein
YP_005001605.1	PFAM: Amidase; manually curated
YP_005001606.1	PFAM: short chain dehydrogenase
YP_005001608.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005001609.1	PFAM: Transcription factor WhiB
YP_005001610.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001611.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005001612.1	PFAM: Amidohydrolase
YP_005001613.1	PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter
YP_005001614.1	PFAM: Protein of unknown function (DUF1445)
YP_005001615.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_005001617.1	PFAM: AMP-binding enzyme
YP_005001618.1	PFAM: short chain dehydrogenase
YP_005001619.1	PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain
YP_005001620.1	PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain
YP_005001621.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family
YP_005001622.1	PFAM: CoA-transferase family III
YP_005001623.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005001624.1	PFAM: AMP-binding enzyme
YP_005001625.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005001626.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001627.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001628.1	PFAM: Integrase core domain
YP_005001630.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001631.1	PFAM: short chain dehydrogenase; manually curated
YP_005001632.1	PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_005001634.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001636.1	PFAM: Cytochrome c oxidase subunit III
YP_005001639.1	PFAM: FAD binding domain
YP_005001640.1	PFAM: IclR helix-turn-helix domain
YP_005001641.1	PFAM: alpha/beta hydrolase fold
YP_005001642.1	PFAM: FAD binding domain
YP_005001643.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_005001644.1	PFAM: FAD binding domain
YP_005001645.1	PFAM: Luciferase-like monooxygenase
YP_005001646.1	PFAM: short chain dehydrogenase
YP_005001647.1	PFAM: Putative cyclase
YP_005001648.1	PFAM: NADPH-dependent FMN reductase
YP_005001649.1	PFAM: TAP-like protein
YP_005001650.1	PFAM: short chain dehydrogenase
YP_005001651.1	PFAM: alpha/beta hydrolase fold
YP_005001652.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005001653.1	PFAM: Protein of unknown function (DUF1271)
YP_005001654.1	PFAM: Cytochrome P450
YP_005001655.1	PFAM: Amidohydrolase
YP_005001656.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005001657.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005001658.1	PFAM: Enoyl-CoA hydratase/isomerase family; manually curated
YP_005001659.1	PFAM: CoA-transferase family III
YP_005001660.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain
YP_005001661.1	PFAM: short chain dehydrogenase
YP_005001662.1	PFAM: short chain dehydrogenase
YP_005001663.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005001664.1	PFAM: Acyltransferase
YP_005001665.1	PFAM: AMP-binding enzyme; manually curated
YP_005001666.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005001667.1	PFAM: Phosphotransferase enzyme family
YP_005001668.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001669.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005001670.1	PFAM: Cytochrome P450
YP_005001671.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005001672.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001673.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001674.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001675.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005001676.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: 4-carboxymuconolactone decarboxylase
YP_005001677.1	PFAM: short chain dehydrogenase
YP_005001678.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005001679.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001681.1	PFAM: Amidohydrolase family
YP_005001683.1	PFAM: Rieske [2Fe-2S] domain
YP_005001684.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005001685.1	PFAM: Amidohydrolase
YP_005001686.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001687.1	PFAM: short chain dehydrogenase
YP_005001688.1	PFAM: CoA-transferase family III
YP_005001689.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001690.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005001691.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001692.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001694.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005001695.1	PFAM: Phosphotransferase enzyme family
YP_005001696.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001697.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005001698.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005001699.1	PFAM: short chain dehydrogenase
YP_005001701.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family
YP_005001703.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005001704.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001705.1	PFAM: von Willebrand factor type A domain
YP_005001706.1	PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal
YP_005001708.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001709.1	PFAM: Rieske [2Fe-2S] domain
YP_005001711.1	PFAM: Amidohydrolase family
YP_005001712.1	PFAM: MarR family
YP_005001713.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005001714.1	PFAM: short chain dehydrogenase
YP_005001715.1	PFAM: Rieske [2Fe-2S] domain
YP_005001717.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005001718.1	PFAM: Cytochrome P450
YP_005001719.1	PFAM: Protein of unknown function (DUF1271)
YP_005001720.1	PFAM: Protein of unknown function (DUF1330)
YP_005001722.1	PFAM: Cytochrome P450
YP_005001723.1	PFAM: Protein of unknown function (DUF1271)
YP_005001724.1	PFAM: Cytochrome P450
YP_005001725.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; manually curated
YP_005001726.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005001728.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005001730.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit
YP_005001733.1	PFAM: Rieske [2Fe-2S] domain
YP_005001734.1	PFAM: Amidohydrolase
YP_005001735.1	PFAM: Amidohydrolase
YP_005001736.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005001737.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001738.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001739.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001740.1	PFAM: short chain dehydrogenase
YP_005001741.1	PFAM: Luciferase-like monooxygenase
YP_005001742.1	PFAM: Sulfotransferase domain
YP_005001743.1	PFAM: Xylose isomerase-like TIM barrel
YP_005001748.1	PFAM: Cytochrome P450
YP_005001750.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005001751.1	PFAM: short chain dehydrogenase
YP_005001752.1	PFAM: Aldehyde dehydrogenase family
YP_005001753.1	PFAM: CoA-transferase family III; manually curated
YP_005001755.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005001756.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005001757.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001758.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001759.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001760.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001761.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001762.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001764.1	manually curated
YP_005001765.1	PFAM: Cytochrome P450
YP_005001766.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001768.1	PFAM: Thiolase, C-terminal domain
YP_005001769.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005001770.1	PFAM: alpha/beta hydrolase fold
YP_005001774.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001775.1	PFAM: AMP-binding enzyme
YP_005001776.1	PFAM: Amidohydrolase
YP_005001777.1	PFAM: AMP-binding enzyme
YP_005001780.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_005001781.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_005001782.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme; manually curated
YP_005001783.1	PFAM: Bacterial low temperature requirement A protein (LtrA)
YP_005001784.1	PFAM: Major Facilitator Superfamily
YP_005001786.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001787.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005001788.1	PFAM: Bacterial extracellular solute-binding protein
YP_005001789.1	PFAM: ABC transporter; TOBE domain
YP_005001790.1	PFAM: TAT (twin-arginine translocation) pathway signal sequence; Domain of unknown function (DUF1906)
YP_005001791.1	PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005001792.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_005001793.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005001794.1	PFAM: AhpC/TSA family
YP_005001795.1	PFAM: Protein of unknown function (DUF3618)
YP_005001796.1	PFAM: GAF domain; Stage II sporulation protein E (SpoIIE)
YP_005001797.1	PFAM: UPF0126 domain
YP_005001798.1	PFAM: L,D-transpeptidase catalytic domain
YP_005001800.1	PFAM: Exonuclease
YP_005001801.1	PFAM: Bacterial protein of unknown function (DUF853)
YP_005001802.1	PFAM: short chain dehydrogenase
YP_005001803.1	PFAM: Vacuole effluxer Atg22 like
YP_005001804.1	PFAM: Mycobacterium membrane protein
YP_005001805.1	PFAM: Prolyl oligopeptidase family
YP_005001808.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001809.1	PFAM: Carboxyl transferase domain; manually curated
YP_005001810.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_005001811.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001812.1	PFAM: MaoC like domain
YP_005001813.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_005001814.1	PFAM: MarR family
YP_005001817.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_005001818.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005001819.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_005001820.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001822.1	PFAM: PE-PPE domain
YP_005001824.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005001825.1	PFAM: Acyltransferase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005001826.1	PFAM: Acyltransferase
YP_005001827.1	PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D
YP_005001828.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005001829.1	PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_005001830.1	PFAM: Bacterial NAD-glutamate dehydrogenase
YP_005001831.1	PFAM: Thioesterase superfamily
YP_005001833.1	PFAM: Integrase core domain
YP_005001834.1	PFAM: Alpha amylase, catalytic domain
YP_005001835.1	PFAM: Bacterial-like globin
YP_005001836.1	PFAM: HNH endonuclease
YP_005001840.1	PFAM: Peptidase family M1; Domain of unknown function (DUF3358); TIGRFAM: aminopeptidase N, Streptomyces lividans type
YP_005001841.1	PFAM: Protein of unknown function (DUF732)
YP_005001842.1	PFAM: DSBA-like thioredoxin domain
YP_005001843.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005001844.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS
YP_005001847.1	PFAM: GAF domain; Stage II sporulation protein E (SpoIIE)
YP_005001850.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_005001851.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005001852.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005001854.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_005001855.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_005001856.1	PFAM: SnoaL-like polyketide cyclase
YP_005001857.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_005001858.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit
YP_005001859.1	PFAM: Domain of unknown function DUF222
YP_005001860.1	PFAM: Integrase core domain
YP_005001861.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal
YP_005001862.1	PFAM: Uncharacterised BCR, COG1937
YP_005001863.1	PFAM: Sulfite exporter TauE/SafE
YP_005001864.1	PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain
YP_005001865.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain
YP_005001866.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005001867.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005001868.1	manually curated
YP_005001869.1	PFAM: Domain of unknown function DUF302
YP_005001870.1	PFAM: Sulfite exporter TauE/SafE
YP_005001871.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain
YP_005001872.1	PFAM: Aminotransferase class-III
YP_005001873.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase
YP_005001874.1	PFAM: Xylose isomerase-like TIM barrel
YP_005001875.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005001876.1	PFAM: Xylose isomerase-like TIM barrel
YP_005001877.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005001878.1	PFAM: KduI/IolB family
YP_005001880.1	PFAM: pfkB family carbohydrate kinase; manually curated
YP_005001881.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005001882.1	PFAM: Xylose isomerase-like TIM barrel
YP_005001883.1	PFAM: family
YP_005001884.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005001885.1	PFAM: ABC transporter
YP_005001886.1	PFAM: AMP-binding enzyme
YP_005001887.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001888.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001889.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001890.1	PFAM: Luciferase-like monooxygenase
YP_005001891.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005001892.1	PFAM: alpha/beta hydrolase fold
YP_005001893.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005001894.1	PFAM: short chain dehydrogenase
YP_005001895.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005001896.1	PFAM: Limonene-1,2-epoxide hydrolase catalytic domain
YP_005001897.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005001898.1	PFAM: Domain of unknown function DUF140
YP_005001899.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001900.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001901.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001902.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001903.1	PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001904.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_005001905.1	PFAM: Protein of unknown function (DUF1271)
YP_005001907.1	PFAM: Cytochrome P450
YP_005001908.1	PFAM: GAF domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005001909.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005001910.1	PFAM: Xylose isomerase-like TIM barrel
YP_005001911.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005001912.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_005001913.1	PFAM: Bacterial regulatory proteins, lacI family
YP_005001914.1	PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit
YP_005001915.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005001916.1	manually curated
YP_005001917.1	PFAM: Transglycosylase-like domain
YP_005001918.1	PFAM: Transglycosylase-like domain
YP_005001919.1	PFAM: FAD binding domain
YP_005001920.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005001921.1	PFAM: HxlR-like helix-turn-helix
YP_005001922.1	PFAM: Prolyl oligopeptidase family
YP_005001923.1	PFAM: Saccharopine dehydrogenase
YP_005001924.1	PFAM: Bacterial protein of unknown function (DUF937)
YP_005001925.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_005001926.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_005001928.1	PFAM: Nucleoside diphosphate kinase
YP_005001929.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_005001930.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_005001931.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_005001932.1	PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension
YP_005001933.1	PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_005001935.1	PFAM: Sir2 family
YP_005001936.1	PFAM: Isochorismatase family
YP_005001937.1	PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_005001938.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_005001940.1	PFAM: Bacterial regulatory protein, arsR family
YP_005001941.1	PFAM: Integrase core domain
YP_005001942.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005001943.1	PFAM: pfkB family carbohydrate kinase
YP_005001944.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_005001945.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005001946.1	PFAM: VWA domain containing CoxE-like protein
YP_005001947.1	PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_005001948.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_005001949.1	PFAM: Phosphoglycerate mutase family
YP_005001951.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family
YP_005001952.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005001953.1	PFAM: short chain dehydrogenase
YP_005001954.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005001955.1	PFAM: Transcriptional regulator PadR-like family
YP_005001956.1	PFAM: FAD binding domain
YP_005001957.1	PFAM: Rieske [2Fe-2S] domain
YP_005001958.1	PFAM: Transposase
YP_005001959.1	PFAM: Integrase core domain
YP_005001963.1	PFAM: Luciferase-like monooxygenase
YP_005001964.1	PFAM: alpha/beta hydrolase fold
YP_005001965.1	PFAM: short chain dehydrogenase
YP_005001967.1	PFAM: AMP-binding enzyme
YP_005001968.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005001969.1	PFAM: short chain dehydrogenase
YP_005001970.1	PFAM: Stress responsive A/B Barrel Domain
YP_005001972.1	PFAM: alpha/beta hydrolase fold
YP_005001973.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005001974.1	PFAM: FAD binding domain
YP_005001975.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 2,3-dihydroxybiphenyl 1,2-dioxygenase
YP_005001976.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005001977.1	PFAM: Flavin-binding monooxygenase-like
YP_005001978.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005001979.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005001980.1	PFAM: alpha/beta hydrolase fold
YP_005001982.1	PFAM: SLBB domain; Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_005001983.1	PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein
YP_005001984.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_005001985.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_005001986.1	PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407)
YP_005001987.1	PFAM: Bacterial domain of unknown function (DUF403)
YP_005001988.1	PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily
YP_005001989.1	PFAM: Putative esterase
YP_005001990.1	PFAM: Cutinase
YP_005001991.1	PFAM: Metallo-beta-lactamase superfamily
YP_005001992.1	PFAM: Aldo/keto reductase family
YP_005001993.1	PFAM: CBS domain
YP_005001994.1	PFAM: Acetyltransferase (GNAT) family
YP_005001995.1	PFAM: PemK-like protein
YP_005001996.1	PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; manually curated; non-canonical start codon
YP_005001999.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain
YP_005002000.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; manually curated
YP_005002002.1	PFAM: ANTAR domain
YP_005002003.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_005002004.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_005002005.1	PFAM: Glycosyl hydrolases family 15
YP_005002006.1	PFAM: FAD binding domain
YP_005002009.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_005002010.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_005002011.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_005002012.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_005002013.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002014.1	PFAM: Luciferase-like monooxygenase
YP_005002015.1	PFAM: Glutamine synthetase, catalytic domain
YP_005002016.1	PFAM: Amino acid permease
YP_005002017.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain
YP_005002018.1	PFAM: ABC transporter
YP_005002019.1	PFAM: NMT1/THI5 like; TIGRFAM: taurine ABC transporter, periplasmic binding protein
YP_005002020.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002021.1	PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain
YP_005002022.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain
YP_005002023.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
YP_005002024.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin
YP_005002025.1	PFAM: Luciferase-like monooxygenase
YP_005002026.1	PFAM: Protein of unknown function (DUF1684)
YP_005002027.1	PFAM: CbiX
YP_005002028.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_005002029.1	PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain
YP_005002030.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_005002031.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005002033.1	PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005002034.1	PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase
YP_005002035.1	PFAM: Phosphopantetheine attachment site; Nonribosomal peptide synthase; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005002037.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_4141 family
YP_005002038.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_005002039.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005002041.1	PFAM: ABC transporter
YP_005002042.1	PFAM: ABC transporter transmembrane region; ABC transporter; Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_005002043.1	PFAM: Protein of unknown function (DUF998)
YP_005002045.1	PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_005002046.1	PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_005002047.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_005002048.1	PFAM: Thioesterase domain
YP_005002049.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005002050.1	PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Methyltransferase domain
YP_005002051.1	PFAM: KH domain; PhoH-like protein
YP_005002052.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_005002053.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005002055.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_005002056.1	PFAM: Mycobacterium membrane protein
YP_005002058.1	PFAM: Amidase
YP_005002059.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_005002060.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_005002062.1	PFAM: Ferric uptake regulator family
YP_005002063.1	PFAM: Bacterial regulatory protein, arsR family
YP_005002064.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type
YP_005002065.1	PFAM: Domain of unknown function (DUF477)
YP_005002066.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005002067.1	PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_005002074.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA oxidase; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002075.1	PFAM: VIT family
YP_005002077.1	PFAM: Major Facilitator Superfamily
YP_005002078.1	PFAM: MarR family
YP_005002079.1	PFAM: ABC transporter
YP_005002080.1	PFAM: Cobalt transport protein
YP_005002081.1	PFAM: Putative modulator of DNA gyrase
YP_005002082.1	PFAM: Putative modulator of DNA gyrase; manually curated
YP_005002084.1	PFAM: MspA
YP_005002085.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005002086.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005002087.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005002088.1	PFAM: PAP2 superfamily
YP_005002089.1	PFAM: Repeat of Unknown Function (DUF347)
YP_005002090.1	PFAM: Repeat of Unknown Function (DUF347)
YP_005002101.1	PFAM: Sulfotransferase domain
YP_005002102.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005002104.1	PFAM: tRNA synthetases class I (M)
YP_005002105.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; alpha/beta hydrolase fold
YP_005002106.1	PFAM: Transglycosylase SLT domain
YP_005002108.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002112.1	PFAM: short chain dehydrogenase
YP_005002113.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_005002114.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002115.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002116.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005002118.1	PFAM: short chain dehydrogenase
YP_005002120.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005002121.1	PFAM: Hsp70 protein
YP_005002122.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_005002124.1	PFAM: DJ-1/PfpI family
YP_005002125.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005002126.1	PFAM: SAM dependent carboxyl methyltransferase
YP_005002127.1	PFAM: short chain dehydrogenase
YP_005002128.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002130.1	PFAM: Metallo-beta-lactamase superfamily
YP_005002131.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase
YP_005002132.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005002133.1	PFAM: Methyltransferase domain
YP_005002134.1	PFAM: Homocysteine S-methyltransferase
YP_005002135.1	PFAM: Beta-lactamase
YP_005002136.1	PFAM: Protein of unknown function (DUF3145)
YP_005002137.1	PFAM: Protein of unknown function (DUF732)
YP_005002138.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family
YP_005002139.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_005002140.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002141.1	PFAM: FAD dependent oxidoreductase
YP_005002142.1	PFAM: Carboxyl transferase domain
YP_005002143.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005002144.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005002145.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005002146.1	PFAM: Acyl transferase domain
YP_005002148.1	PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type
YP_005002150.1	PFAM: Protein of unknown function (DUF3052)
YP_005002151.1	PFAM: AhpC/TSA family
YP_005002153.1	PFAM: Nitroreductase family
YP_005002154.1	PFAM: Protein of unknown function (DUF2855)
YP_005002155.1	PFAM: Universal stress protein family
YP_005002156.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005002157.1	PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_005002158.1	PFAM: SURF1 family
YP_005002159.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005002160.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005002161.1	PFAM: Aminotransferase class I and II; manually curated
YP_005002162.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_005002163.1	PFAM: Putative zinc ribbon domain
YP_005002164.1	PFAM: RNase H; Phosphoglycerate mutase family
YP_005002165.1	PFAM: Cupin domain; Helix-turn-helix
YP_005002167.1	PFAM: Methyltransferase domain
YP_005002168.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2086)
YP_005002169.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain
YP_005002171.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005002172.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005002173.1	PFAM: Bacterial regulatory protein, arsR family
YP_005002174.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_005002175.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005002176.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005002178.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005002179.1	PFAM: CYTH domain; CHAD domain; manually curated
YP_005002180.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002181.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005002182.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005002183.1	PFAM: alpha/beta hydrolase fold
YP_005002184.1	PFAM: Acetyltransferase (GNAT) family
YP_005002185.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005002186.1	PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_005002188.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005002189.1	PFAM: DoxX
YP_005002190.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005002191.1	PFAM: RDD family
YP_005002192.1	PFAM: Amidohydrolase family
YP_005002194.1	PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_005002195.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_005002196.1	PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein
YP_005002197.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
YP_005002199.1	PFAM: short chain dehydrogenase; alpha/beta hydrolase fold
YP_005002200.1	PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_005002201.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005002202.1	PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_005002203.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_005002204.1	PFAM: Protein of unknown function (DUF732)
YP_005002205.1	PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_005002206.1	PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_005002207.1	PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_005002208.1	PFAM: Protein of unknown function (DUF3043)
YP_005002209.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_005002210.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005002214.1	PFAM: pfkB family carbohydrate kinase
YP_005002215.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_005002216.1	PFAM: Cytochrome C oxidase subunit II, periplasmic domain
YP_005002217.1	PFAM: Cytochrome c oxidase subunit IV
YP_005002218.1	PFAM: Mycobacterium membrane protein
YP_005002219.1	PFAM: Protein of unknown function (DUF2561)
YP_005002221.1	PFAM: Rieske [2Fe-2S] domain
YP_005002222.1	PFAM: Cytochrome c
YP_005002223.1	PFAM: Cytochrome c oxidase subunit III; manually curated
YP_005002224.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; manually curated
YP_005002225.1	PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_005002227.1	PFAM: NlpC/P60 family
YP_005002228.1	manually curated; non-canonical start codon
YP_005002229.1	PFAM: Glycosyl transferases group 1
YP_005002230.1	PFAM: AMP-binding enzyme
YP_005002232.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002233.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_005002235.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005002236.1	PFAM: Protein of unknown function (DUF2029)
YP_005002239.1	PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II
YP_005002240.1	PFAM: Protein kinase domain
YP_005002242.1	TIGRFAM: carotene biosynthesis associated membrane protein
YP_005002243.1	PFAM: Polyprenyl synthetase
YP_005002244.1	PFAM: Protein of unknown function (DUF3153)
YP_005002245.1	PFAM: Acetyltransferase (GNAT) family
YP_005002246.1	PFAM: Protein of unknown function (DUF3040)
YP_005002247.1	PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_005002248.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_005002250.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005002251.1	PFAM: Putative transposase DNA-binding domain; Probable transposase
YP_005002252.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_005002253.1	PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_005002254.1	PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_005002255.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_005002256.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_005002257.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; manually curated
YP_005002258.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_005002259.1	PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type
YP_005002260.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_005002261.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_005002262.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005002263.1	PFAM: Protein of unknown function (DUF552)
YP_005002264.1	PFAM: YGGT family
YP_005002265.1	PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_005002267.1	PFAM: Phosphoribosyl transferase domain
YP_005002268.1	PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein
YP_005002269.1	PFAM: Glutamine amidotransferase class-I
YP_005002270.1	PFAM: Beta-lactamase
YP_005002272.1	PFAM: Cytochrome P450; manually curated
YP_005002274.1	PFAM: Integrase core domain
YP_005002275.1	PFAM: Domain of unknown function DUF222
YP_005002276.1	PFAM: Flavin-binding monooxygenase-like
YP_005002277.1	PFAM: short chain dehydrogenase
YP_005002278.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002279.1	PFAM: TM2 domain
YP_005002280.1	PFAM: Protein of unknown function (DUF2752); TIGRFAM: PEP-CTERM putative exosortase interaction domain
YP_005002281.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_005002282.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit
YP_005002283.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_005002284.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005002286.1	PFAM: ABC transporter
YP_005002287.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: thiol reductant ABC exporter, CydD subunit
YP_005002288.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_005002289.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_005002290.1	PFAM: Short repeat of unknown function (DUF308)
YP_005002291.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005002292.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005002293.1	PFAM: ABC transporter
YP_005002294.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005002295.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; manually curated
YP_005002296.1	PFAM: Predicted membrane protein (DUF2339)
YP_005002297.1	PFAM: Ferritin-like domain
YP_005002298.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005002300.1	PFAM: Response regulator receiver domain; ANTAR domain
YP_005002301.1	PFAM: Receptor family ligand binding region
YP_005002302.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005002303.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005002304.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_005002305.1	PFAM: ABC transporter
YP_005002306.1	PFAM: Beta-ketoacyl synthase, N-terminal domain
YP_005002307.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005002310.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_005002311.1	PFAM: LysE type translocator
YP_005002313.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_005002314.1	PFAM: Dephospho-CoA kinase; Uncharacterised protein family (UPF0157); TIGRFAM: dephospho-CoA kinase
YP_005002316.1	PFAM: Protein of unknown function (DUF402)
YP_005002317.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_005002319.1	PFAM: Major Facilitator Superfamily
YP_005002320.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_005002321.1	PFAM: MgtC family
YP_005002322.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002324.1	PFAM: alpha/beta hydrolase fold
YP_005002325.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase family domain; manually curated
YP_005002327.1	PFAM: Universal stress protein family
YP_005002328.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005002329.1	PFAM: Fructose-bisphosphate aldolase class-I
YP_005002330.1	PFAM: Cytochrome P450
YP_005002331.1	PFAM: short chain dehydrogenase
YP_005002332.1	PFAM: Metallo-beta-lactamase superfamily
YP_005002333.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_005002334.1	PFAM: Protein of unknown function (DUF1006)
YP_005002335.1	PFAM: Mycobacterium 19 kDa lipoprotein antigen
YP_005002342.1	PFAM: Putative esterase
YP_005002343.1	PFAM: Uncharacterized conserved protein (DUF2156); tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_005002344.1	PFAM: alpha/beta hydrolase fold
YP_005002346.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_005002347.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_005002348.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_005002349.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding
YP_005002350.1	PFAM: short chain dehydrogenase; manually curated
YP_005002352.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002353.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_005002354.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005002358.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_005002359.1	PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_005002360.1	PFAM: Protein of unknown function (DUF3478)
YP_005002361.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_005002362.1	PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_005002363.1	PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_005002364.1	PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_005002365.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005002366.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_005002367.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_005002368.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005002369.1	PFAM: ABC transporter
YP_005002370.1	PFAM: AMP-binding enzyme
YP_005002372.1	PFAM: Trm112p-like protein
YP_005002373.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002374.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005002375.1	PFAM: ABC transporter
YP_005002376.1	PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg)
YP_005002377.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_005002379.1	TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_005002381.1	PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein
YP_005002382.1	PFAM: ATP-NAD kinase
YP_005002383.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_005002384.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002385.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005002386.1	PFAM: Thiamine pyrophosphokinase C terminal
YP_005002387.1	PFAM: Protein of unknown function (DUF3186)
YP_005002388.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_005002389.1	PFAM: NUDIX domain
YP_005002390.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_005002391.1	PFAM: O-methyltransferase
YP_005002392.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005002393.1	PFAM: ScpA/B protein
YP_005002394.1	PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_005002395.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005002396.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_005002397.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_005002398.1	PFAM: Sulfite exporter TauE/SafE
YP_005002399.1	PFAM: Sulfite exporter TauE/SafE
YP_005002400.1	PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein
YP_005002401.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002402.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002403.1	PFAM: DivIVA protein
YP_005002404.1	PFAM: IclR helix-turn-helix domain
YP_005002405.1	PFAM: short chain dehydrogenase
YP_005002406.1	PFAM: Acetoacetate decarboxylase (ADC)
YP_005002407.1	PFAM: Amidohydrolase
YP_005002408.1	PFAM: Amidohydrolase
YP_005002409.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002410.1	PFAM: CoA-transferase family III
YP_005002412.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005002413.1	PFAM: B12 binding domain
YP_005002414.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_005002415.1	PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005002417.1	PFAM: Acyltransferase family
YP_005002418.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_005002419.1	PFAM: Cutinase
YP_005002421.1	PFAM: Protein of unknown function (DUF2782)
YP_005002422.1	PFAM: Protein of unknown function (DUF732)
YP_005002423.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_005002424.1	PFAM: Mycobacterium membrane protein
YP_005002425.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005002426.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005002427.1	PFAM: Cytochrome P450
YP_005002428.1	PFAM: AMP-binding enzyme
YP_005002429.1	PFAM: Amidohydrolase
YP_005002430.1	PFAM: Rieske [2Fe-2S] domain
YP_005002431.1	PFAM: FAD binding domain
YP_005002432.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002433.1	PFAM: CoA-transferase family III
YP_005002434.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002435.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002436.1	PFAM: short chain dehydrogenase
YP_005002438.1	PFAM: Dehydrogenase E1 component
YP_005002439.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005002440.1	PFAM: Biotin-requiring enzyme
YP_005002441.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002442.1	PFAM: AMP-binding enzyme
YP_005002443.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005002444.1	PFAM: Cytochrome P450
YP_005002445.1	PFAM: Rieske [2Fe-2S] domain
YP_005002446.1	PFAM: Amidohydrolase
YP_005002447.1	PFAM: Amidohydrolase
YP_005002449.1	PFAM: short chain dehydrogenase
YP_005002450.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005002451.1	PFAM: CoA-transferase family III
YP_005002452.1	PFAM: Cytochrome P450
YP_005002453.1	PFAM: Rieske [2Fe-2S] domain
YP_005002454.1	PFAM: AMP-binding enzyme
YP_005002457.1	PFAM: MaoC like domain
YP_005002458.1	PFAM: Aldehyde dehydrogenase family
YP_005002460.1	PFAM: Rieske [2Fe-2S] domain
YP_005002463.1	PFAM: Nuclear transport factor 2 (NTF2) domain
YP_005002466.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005002469.1	PFAM: Integrase core domain
YP_005002471.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005002473.1	PFAM: NUDIX domain
YP_005002475.1	PFAM: Protein kinase domain
YP_005002476.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005002477.1	PFAM: Predicted metal-dependent hydrolase
YP_005002478.1	PFAM: Acyltransferase
YP_005002479.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002481.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005002482.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005002483.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002484.1	PFAM: short chain dehydrogenase; TIGRFAM: light-dependent protochlorophyllide reductase
YP_005002486.1	PFAM: Domain of unknown function DUF
YP_005002487.1	PFAM: Major Facilitator Superfamily
YP_005002488.1	PFAM: Small Multidrug Resistance protein
YP_005002489.1	PFAM: Small Multidrug Resistance protein
YP_005002490.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002491.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_005002492.1	PFAM: Carboxylesterase
YP_005002493.1	PFAM: Fatty acid hydroxylase superfamily
YP_005002494.1	PFAM: FAD dependent oxidoreductase
YP_005002496.1	PFAM: Domain of unknown function (DUF385)
YP_005002497.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002498.1	PFAM: Bacterial regulatory protein, arsR family
YP_005002499.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_005002501.1	PFAM: FAD binding domain
YP_005002502.1	PFAM: ABC transporter; ABC transporter transmembrane region 2
YP_005002503.1	PFAM: FAD binding domain
YP_005002504.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005002505.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain
YP_005002506.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005002507.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_005002508.1	PFAM: Protein of unknown function (DUF1290)
YP_005002509.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_005002510.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_005002511.1	PFAM: FHA domain
YP_005002512.1	PFAM: MerR family regulatory protein
YP_005002513.1	PFAM: Uncharacterised ACR, COG1259
YP_005002515.1	PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating)
YP_005002516.1	PFAM: alpha/beta hydrolase fold
YP_005002517.1	PFAM: alpha/beta hydrolase fold
YP_005002519.1	PFAM: Malate synthase; TIGRFAM: malate synthase G
YP_005002521.1	PFAM: CBS domain; Domain of unknown function DUF21
YP_005002522.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005002523.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein
YP_005002524.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating
YP_005002525.1	PFAM: Peptidase family M48
YP_005002526.1	PFAM: Penicillinase repressor
YP_005002527.1	PFAM: Ferric iron reductase FhuF-like transporter
YP_005002528.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005002529.1	PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit
YP_005002530.1	PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit
YP_005002531.1	PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit
YP_005002532.1	PFAM: UreF
YP_005002533.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG
YP_005002534.1	PFAM: UreD urease accessory protein
YP_005002535.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005002536.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_005002537.1	PFAM: short chain dehydrogenase
YP_005002538.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; NifC-like ABC-type porter
YP_005002539.1	PFAM: ABC transporter; TOBE domain
YP_005002540.1	PFAM: Fibronectin-attachment protein (FAP)
YP_005002542.1	PFAM: Transglycosylase associated protein
YP_005002543.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; manually curated
YP_005002545.1	PFAM: Protein of unknown function (DUF1470); CGNR zinc finger
YP_005002546.1	PFAM: CAAX amino terminal protease family
YP_005002547.1	PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_005002548.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005002549.1	PFAM: CoA-transferase family III
YP_005002551.1	PFAM: short chain dehydrogenase
YP_005002553.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005002554.1	PFAM: Protein of unknown function DUF72
YP_005002556.1	PFAM: TfoX N-terminal domain
YP_005002557.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005002558.1	PFAM: Putative esterase
YP_005002559.1	PFAM: FMN-dependent dehydrogenase
YP_005002560.1	PFAM: Mechanosensitive ion channel; Cyclic nucleotide-binding domain
YP_005002561.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_005002562.1	PFAM: Protein of unknown function (DUF1810)
YP_005002563.1	PFAM: Alpha amylase, catalytic domain
YP_005002564.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005002566.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002568.1	PFAM: Thioesterase superfamily; manually curated
YP_005002569.1	PFAM: Fusaric acid resistance protein family
YP_005002570.1	PFAM: Nitrile hydratase beta subunit
YP_005002571.1	PFAM: Nitrile hydratase, alpha chain; TIGRFAM: thiocyanate hydrolase, gamma subunit
YP_005002574.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_005002575.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002576.1	PFAM: BFD-like [2Fe-2S] binding domain
YP_005002578.1	PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin
YP_005002579.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005002580.1	PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); CHASE3 domain
YP_005002583.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005002584.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005002585.1	PFAM: Glutamine synthetase, catalytic domain
YP_005002586.1	PFAM: Limonene-1,2-epoxide hydrolase catalytic domain; manually curated
YP_005002587.1	PFAM: Amidohydrolase family
YP_005002588.1	PFAM: short chain dehydrogenase
YP_005002589.1	PFAM: Dienelactone hydrolase family
YP_005002590.1	PFAM: Glycosyl transferases group 1
YP_005002591.1	PFAM: Protein of unknown function (DUF1275)
YP_005002595.1	PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_005002596.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005002599.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005002602.1	PFAM: Chain length determinant protein
YP_005002603.1	PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family
YP_005002604.1	PFAM: Glycosyl hydrolase family 71
YP_005002605.1	PFAM: Secretory lipase
YP_005002606.1	PFAM: Glycosyl transferases group 1
YP_005002608.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005002609.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_005002610.1	PFAM: Glycosyl transferases group 1
YP_005002612.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005002613.1	PFAM: Cytochrome P450; manually curated
YP_005002614.1	PFAM: Flavin-binding monooxygenase-like
YP_005002617.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002618.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_3544 family
YP_005002619.1	PFAM: Redoxin
YP_005002620.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005002621.1	PFAM: MarR family; Acetyltransferase (GNAT) family
YP_005002622.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_005002623.1	PFAM: Prophage protein (DUF1660)
YP_005002624.1	PFAM: Sugar (and other) transporter
YP_005002625.1	PFAM: alpha/beta hydrolase fold
YP_005002626.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002628.1	PFAM: Protein of unknown function, DUF393
YP_005002629.1	PFAM: Arginase family; TIGRFAM: agmatinase; formimidoylglutamase
YP_005002630.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005002631.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_005002632.1	PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial
YP_005002635.1	PFAM: L,D-transpeptidase catalytic domain
YP_005002636.1	PFAM: Fatty acid hydroxylase superfamily
YP_005002637.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005002639.1	PFAM: Mycobacterium 19 kDa lipoprotein antigen
YP_005002640.1	PFAM: Helix-turn-helix
YP_005002642.1	PFAM: Cytochrome P450
YP_005002644.1	PFAM: Protein of unknown function (DUF2867)
YP_005002645.1	PFAM: Protein of unknown function (DUF2867)
YP_005002646.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002647.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005002648.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002649.1	PFAM: 2-nitropropane dioxygenase
YP_005002650.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_005002651.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005002652.1	PFAM: short chain dehydrogenase; manually curated
YP_005002653.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005002654.1	PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain
YP_005002656.1	PFAM: alpha/beta hydrolase fold
YP_005002659.1	PFAM: AMP-binding enzyme
YP_005002661.1	PFAM: Protein of unknown function (DUF328)
YP_005002663.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_005002664.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal
YP_005002665.1	PFAM: Bacterial regulatory protein, arsR family; Activator of Hsp90 ATPase homolog 1-like protein
YP_005002666.1	PFAM: Bacterial protein of unknown function (DUF899)
YP_005002667.1	PFAM: Metallo-beta-lactamase superfamily
YP_005002668.1	PFAM: Glycosyltransferase family 28 N-terminal domain; UDP-glucoronosyl and UDP-glucosyl transferase
YP_005002669.1	PFAM: Phospholipase/Carboxylesterase
YP_005002670.1	PFAM: Glutamine amidotransferase class-I
YP_005002671.1	PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI
YP_005002672.1	PFAM: Ferric uptake regulator family
YP_005002673.1	PFAM: Acyltransferase family
YP_005002675.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005002676.1	PFAM: alpha/beta hydrolase fold
YP_005002677.1	PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase
YP_005002679.1	PFAM: FAD dependent oxidoreductase
YP_005002680.1	PFAM: NlpC/P60 family
YP_005002681.1	PFAM: AMP-binding enzyme
YP_005002682.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; manually curated
YP_005002683.1	PFAM: DJ-1/PfpI family
YP_005002685.1	PFAM: MOSC domain; 3-alpha domain
YP_005002688.1	PFAM: Protein of unknown function (DUF732)
YP_005002690.1	PFAM: Protein kinase domain
YP_005002691.1	PFAM: Protein of unknown function (DUF664)
YP_005002692.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; manually curated
YP_005002694.1	PFAM: alpha/beta hydrolase fold
YP_005002695.1	PFAM: Metallo-beta-lactamase superfamily
YP_005002697.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005002698.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; manually curated
YP_005002699.1	PFAM: Acyltransferase family
YP_005002700.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005002701.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005002704.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002706.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2906 family
YP_005002708.1	PFAM: HTH domain
YP_005002710.1	PFAM: TM1410 hypothetical-related protein; manually curated
YP_005002711.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_005002713.1	PFAM: Flavin-binding monooxygenase-like
YP_005002714.1	PFAM: Flavin-binding monooxygenase-like
YP_005002715.1	PFAM: ABC transporter
YP_005002716.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005002717.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005002719.1	PFAM: Protein of unknown function (DUF3705)
YP_005002721.1	PFAM: Methyltransferase domain
YP_005002722.1	PFAM: Integral membrane protein (intg_mem_TP0381); TIGRFAM: conserved hypothetical integral membrane protein TIGR02206
YP_005002723.1	PFAM: alpha/beta hydrolase fold
YP_005002724.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; manually curated
YP_005002725.1	PFAM: Major Facilitator Superfamily
YP_005002726.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002727.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; manually curated; non-canonical start codon
YP_005002728.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_005002729.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002730.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002731.1	manually curated
YP_005002732.1	PFAM: EamA-like transporter family
YP_005002733.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005002734.1	PFAM: Metallo-beta-lactamase superfamily
YP_005002735.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase
YP_005002737.1	PFAM: DoxX
YP_005002738.1	PFAM: RDD family
YP_005002739.1	PFAM: GntP family permease; TIGRFAM: gluconate transporter
YP_005002740.1	PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family
YP_005002741.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005002743.1	PFAM: Integrase core domain
YP_005002744.1	PFAM: Uncharacterised BCR, YnfA/UPF0060 family
YP_005002745.1	PFAM: Domain of unknown function (DUF227)
YP_005002746.1	PFAM: Carboxylesterase
YP_005002748.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005002749.1	PFAM: Bacterial regulatory protein, arsR family
YP_005002750.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent
YP_005002751.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_005002752.1	PFAM: ABC transporter
YP_005002753.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002755.1	PFAM: Transcriptional regulatory protein, C terminal; alpha/beta hydrolase fold
YP_005002756.1	manually curated
YP_005002758.1	PFAM: Glycosyl transferase family 2
YP_005002759.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005002760.1	PFAM: Amidohydrolase family
YP_005002761.1	PFAM: FxsA cytoplasmic membrane protein
YP_005002762.1	PFAM: Dienelactone hydrolase family
YP_005002763.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv2061 family
YP_005002764.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv2061 family
YP_005002765.1	PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit
YP_005002767.1	PFAM: Flavin-binding monooxygenase-like
YP_005002768.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005002769.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002770.1	PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_005002771.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005002772.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005002774.1	PFAM: Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: precorrin-3B synthase
YP_005002775.1	PFAM: Precorrin-8X methylmutase
YP_005002776.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase
YP_005002777.1	PFAM: Phosphotransferase enzyme family
YP_005002778.1	PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase
YP_005002779.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase
YP_005002780.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
YP_005002781.1	PFAM: short chain dehydrogenase; manually curated
YP_005002782.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme; manually curated
YP_005002783.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005002784.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005002785.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain
YP_005002787.1	PFAM: Helicase conserved C-terminal domain; DSHCT (NUC185) domain; DEAD/DEAH box helicase
YP_005002788.1	PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; manually curated
YP_005002789.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_005002791.1	manually curated
YP_005002792.1	PFAM: Methyltransferase domain
YP_005002793.1	PFAM: Pup-ligase protein; TIGRFAM: proteasome accessory factor PafA
YP_005002794.1	PFAM: Alpha/beta hydrolase of unknown function (DUF1023)
YP_005002795.1	PFAM: alpha/beta hydrolase fold
YP_005002796.1	PFAM: Proteasome subunit; TIGRFAM: proteasome, alpha subunit, bacterial type
YP_005002797.1	PFAM: Proteasome subunit; TIGRFAM: proteasome, beta subunit, bacterial type; manually curated
YP_005002798.1	PFAM: Pup-like protein; TIGRFAM: ubiquitin-like protein Pup
YP_005002799.1	PFAM: Pup-ligase protein; TIGRFAM: proteasome accessory factor PafA2
YP_005002804.1	PFAM: Protein of unknown function (DUF732)
YP_005002805.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: proteasome ATPase
YP_005002808.1	PFAM: Protein of unknown function (DUF503)
YP_005002809.1	PFAM: tRNA methyltransferase complex GCD14 subunit; manually curated
YP_005002810.1	PFAM: Protein of unknown function (DUF2800)
YP_005002812.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005002814.1	PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase
YP_005002815.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_005002816.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_005002817.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005002818.1	PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_005002819.1	PFAM: PAC2 family
YP_005002820.1	PFAM: Protein of unknown function (DUF1214); Protein of unknown function (DUF1254); manually curated
YP_005002821.1	PFAM: short chain dehydrogenase
YP_005002822.1	PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase
YP_005002823.1	PFAM: Inositol monophosphatase family
YP_005002824.1	PFAM: Phosphatidylinositol 3- and 4-kinase; TIGRFAM: conserved hypothetical protein
YP_005002825.1	PFAM: Protein of unknown function (DUF3090); TIGRFAM: conserved hypothetical protein
YP_005002826.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: probable phosphomutase, MSMEG_4193 family
YP_005002827.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_005002831.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_005002832.1	PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family
YP_005002833.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005002834.1	PFAM: Recombinase; Resolvase, N terminal domain; manually curated
YP_005002835.1	manually curated
YP_005002836.1	PFAM: FtsK/SpoIIIE family
YP_005002839.1	PFAM: Creatinine amidohydrolase
YP_005002840.1	PFAM: Transposase
YP_005002841.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002842.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005002843.1	PFAM: SCP-2 sterol transfer family
YP_005002845.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002846.1	PFAM: AMP-binding enzyme
YP_005002847.1	PFAM: Transglutaminase-like superfamily
YP_005002848.1	PFAM: Cytochrome P450
YP_005002849.1	PFAM: Flavin-binding monooxygenase-like
YP_005002850.1	PFAM: alpha/beta hydrolase fold
YP_005002851.1	PFAM: Flavin-binding monooxygenase-like
YP_005002852.1	PFAM: Flavin-binding monooxygenase-like
YP_005002854.1	PFAM: short chain dehydrogenase; manually curated
YP_005002855.1	PFAM: Predicted metal-dependent hydrolase
YP_005002856.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005002857.1	PFAM: Carboxyl transferase domain
YP_005002858.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_005002859.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005002860.1	PFAM: AMP-binding enzyme; TIGRFAM: O-succinylbenzoate-CoA ligase
YP_005002861.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002864.1	PFAM: Wyosine base formation; Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03084 family protein; uncharacterized Actinobacterial protein TIGR03083
YP_005002865.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002866.1	PFAM: MaoC like domain
YP_005002868.1	PFAM: MaoC like domain
YP_005002869.1	PFAM: MaoC like domain
YP_005002870.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family
YP_005002871.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005002873.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005002874.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005002875.1	PFAM: Cytochrome P450
YP_005002876.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005002877.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002878.1	PFAM: Putative lysophospholipase
YP_005002879.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005002880.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005002882.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005002883.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005002884.1	PFAM: Putative FMN-binding domain
YP_005002885.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_005002886.1	PFAM: Flavodoxin; Molybdopterin oxidoreductase; FAD binding domain; Molydopterin dinucleotide binding domain; Oxidoreductase NAD-binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component
YP_005002887.1	PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_005002888.1	PFAM: Universal stress protein family
YP_005002889.1	PFAM: Tripartite tricarboxylate transporter TctA family
YP_005002890.1	PFAM: Tripartite tricarboxylate transporter TctB family
YP_005002891.1	PFAM: Tripartite tricarboxylate transporter family receptor
YP_005002892.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold
YP_005002893.1	PFAM: Response regulator receiver domain
YP_005002895.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005002896.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005002897.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005002898.1	PFAM: Indole-3-glycerol phosphate synthase
YP_005002899.1	PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein
YP_005002900.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_005002901.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_005002902.1	PFAM: AhpC/TSA family
YP_005002904.1	PFAM: alpha/beta hydrolase fold
YP_005002905.1	PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_005002906.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_005002907.1	PFAM: Inositol monophosphatase family
YP_005002908.1	PFAM: Histidine biosynthesis protein; TIGRFAM: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_005002909.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_005002910.1	PFAM: Imidazoleglycerol-phosphate dehydratase
YP_005002911.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005002912.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005002915.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005002916.1	PFAM: Alcohol dehydrogenase GroES-like domain
YP_005002917.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002918.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_005002919.1	PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_005002920.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_005002921.1	PFAM: NUDIX domain
YP_005002922.1	PFAM: Secretory lipase
YP_005002923.1	PFAM: Protein of unknown function (DUF2567)
YP_005002925.1	PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_005002926.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_005002927.1	PFAM: Protein of unknown function (DUF419)
YP_005002929.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_005002930.1	PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_005002931.1	PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_005002932.1	PFAM: Acyltransferase family
YP_005002933.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX
YP_005002934.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase; manually curated
YP_005002935.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_005002936.1	PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase
YP_005002937.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005002940.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005002942.1	PFAM: Leucine carboxyl methyltransferase
YP_005002944.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005002945.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005002946.1	PFAM: HxlR-like helix-turn-helix; manually curated
YP_005002948.1	PFAM: EamA-like transporter family; TIGRFAM: rarD protein
YP_005002949.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005002950.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_005002951.1	PFAM: Asparaginase
YP_005002952.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; manually curated
YP_005002954.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family
YP_005002956.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_005002960.1	PFAM: Beta-lactamase
YP_005002961.1	PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_005002962.1	PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain
YP_005002963.1	PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain
YP_005002964.1	PFAM: SNARE associated Golgi protein
YP_005002965.1	PFAM: Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005002966.1	PFAM: SPFH domain / Band 7 family
YP_005002967.1	PFAM: NfeD-like
YP_005002969.1	PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_005002971.1	PFAM: short chain dehydrogenase
YP_005002972.1	PFAM: von Willebrand factor type A domain
YP_005002973.1	PFAM: von Willebrand factor type A domain
YP_005002974.1	PFAM: Protein of unknown function DUF58
YP_005002975.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005002976.1	PFAM: NlpC/P60 family
YP_005002977.1	PFAM: NlpC/P60 family
YP_005002979.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_005002980.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005002982.1	PFAM: ABC transporter
YP_005002983.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005002984.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005002987.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; MOSC domain; Oxidoreductase NAD-binding domain; 3-alpha domain
YP_005002988.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II
YP_005002990.1	PFAM: Domain of unknown function DUF59
YP_005002991.1	PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_005002992.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_005002993.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_005002994.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD
YP_005002995.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_005002996.1	PFAM: Bacterial regulatory protein, arsR family
YP_005002997.1	PFAM: Zinc-binding dehydrogenase
YP_005002999.1	PFAM: ABC transporter
YP_005003000.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005003002.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003003.1	PFAM: Cytochrome oxidase assembly protein
YP_005003005.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005003006.1	PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_005003007.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005003008.1	PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type
YP_005003009.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_005003010.1	PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein
YP_005003011.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase
YP_005003013.1	PFAM: Domain of unknown function DUF222
YP_005003015.1	PFAM: Cytochrome P450
YP_005003016.1	PFAM: short chain dehydrogenase
YP_005003017.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003018.1	PFAM: Sulfotransferase domain
YP_005003019.1	PFAM: Protein of unknown function (DUF1214)
YP_005003020.1	PFAM: Phosphoenolpyruvate carboxylase
YP_005003021.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_005003022.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_005003023.1	PFAM: Phosphoglycerate kinase
YP_005003024.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005003026.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005003027.1	PFAM: NB-ARC domain
YP_005003028.1	PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein
YP_005003029.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_005003030.1	PFAM: P-loop ATPase protein family
YP_005003031.1	PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; Helix-hairpin-helix motif; TIGRFAM: excinuclease ABC, C subunit
YP_005003032.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_005003033.1	PFAM: Acetyltransferase (GNAT) family
YP_005003034.1	PFAM: Protein of unknown function (DUF2581)
YP_005003035.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_005003036.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005003037.1	PFAM: Protein of unknown function (DUF2510)
YP_005003039.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_005003040.1	PFAM: Protein of unknown function (DUF1396)
YP_005003041.1	PFAM: Major Facilitator Superfamily
YP_005003043.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_005003044.1	PFAM: Predicted permease
YP_005003045.1	PFAM: ABC transporter; Cyclic nucleotide-binding domain
YP_005003046.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_005003047.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005003048.1	PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_005003049.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005003050.1	PFAM: LemA family
YP_005003051.1	PFAM: Predicted membrane protein (DUF2207)
YP_005003052.1	TIGRFAM: primosomal protein N'
YP_005003053.1	PFAM: YhhN-like protein
YP_005003054.1	PFAM: alpha/beta hydrolase fold
YP_005003055.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005003056.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005003057.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_005003058.1	PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_005003059.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; manually curated
YP_005003061.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2330)
YP_005003063.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2
YP_005003064.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005003065.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005003067.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_005003068.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_005003069.1	PFAM: Phosphoribosyl transferase domain
YP_005003070.1	PFAM: Beta-lactamase
YP_005003071.1	PFAM: FAD binding domain
YP_005003072.1	PFAM: Integrase core domain
YP_005003074.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_005003075.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_005003076.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005003079.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_005003080.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_005003081.1	PFAM: Shikimate kinase
YP_005003082.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; manually curated
YP_005003083.1	PFAM: Protein of unknown function (DUF1097)
YP_005003084.1	PFAM: Nitrile hydratase beta subunit; TIGRFAM: nitrile hydratase, beta subunit
YP_005003085.1	PFAM: Nitrile hydratase, alpha chain; TIGRFAM: nitrile hydratase, alpha subunit
YP_005003086.1	PFAM: Nitrile hydratase beta subunit; TIGRFAM: nitrile hydratase accessory protein
YP_005003088.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003089.1	PFAM: Protein of unknown function (DUF3237)
YP_005003090.1	PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein
YP_005003091.1	PFAM: Type IV leader peptidase family
YP_005003092.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate-5-dehydrogenase, fungal AROM-type; shikimate 5-dehydrogenase
YP_005003093.1	PFAM: YceG-like family
YP_005003094.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_005003095.1	PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_005003096.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_005003097.1	PFAM: Transglycosylase associated protein
YP_005003098.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_005003099.1	PFAM: Bacterial regulatory protein, arsR family
YP_005003100.1	PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_005003101.1	PFAM: Protein of unknown function (DUF3097)
YP_005003103.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2248)
YP_005003104.1	PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily
YP_005003105.1	PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF407); Domain of unknown function (DUF404)
YP_005003106.1	PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126)
YP_005003107.1	PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain
YP_005003108.1	PFAM: HxlR-like helix-turn-helix
YP_005003109.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005003110.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005003111.1	PFAM: short chain dehydrogenase
YP_005003113.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005003114.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_005003116.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005003117.1	PFAM: Carboxylesterase
YP_005003118.1	PFAM: Putative neutral zinc metallopeptidase
YP_005003119.1	PFAM: Metallo-beta-lactamase superfamily
YP_005003121.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005003122.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005003123.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003124.1	PFAM: Amidohydrolase
YP_005003125.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003126.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003127.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase
YP_005003130.1	PFAM: Radical SAM superfamily
YP_005003131.1	PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain
YP_005003135.1	PFAM: Receptor family ligand binding region; TIGRFAM: urea ABC transporter, urea binding protein
YP_005003136.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB
YP_005003137.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC
YP_005003138.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD
YP_005003139.1	PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE
YP_005003141.1	PFAM: Amidohydrolase
YP_005003142.1	PFAM: RibD C-terminal domain; manually curated
YP_005003144.1	PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005003145.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_005003146.1	PFAM: Metallo-beta-lactamase superfamily
YP_005003147.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005003148.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005003150.1	PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005003151.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_005003152.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005003153.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_005003154.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_005003155.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_005003157.1	PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_005003158.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: 1-pyrroline dehydrogenase
YP_005003159.1	PFAM: alpha/beta hydrolase fold
YP_005003160.1	PFAM: MarR family
YP_005003162.1	PFAM: Male sterility protein; Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: thioester reductase domain
YP_005003163.1	PFAM: Protein of unknown function (DUF1304)
YP_005003164.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_005003165.1	PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_005003166.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_005003168.1	PFAM: Mechanosensitive ion channel
YP_005003169.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_005003171.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003172.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family
YP_005003173.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003174.1	PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
YP_005003175.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005003176.1	PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
YP_005003177.1	PFAM: NUDIX domain
YP_005003178.1	PFAM: Glycosyl transferases group 1
YP_005003179.1	PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_005003180.1	PFAM: CDP-alcohol phosphatidyltransferase
YP_005003181.1	PFAM: HIT domain
YP_005003182.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase
YP_005003183.1	PFAM: Putative transmembrane protein (PGPGW); TIGRFAM: TIGR02611 family protein
YP_005003184.1	PFAM: Thioesterase superfamily
YP_005003185.1	PFAM: Aldo/keto reductase family
YP_005003186.1	PFAM: Domain of unknown function (DUF1990)
YP_005003187.1	PFAM: ANTAR domain
YP_005003188.1	PFAM: L,D-transpeptidase catalytic domain
YP_005003191.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005003192.1	PFAM: Protein of unknown function (DUF1469)
YP_005003193.1	PFAM: Protein of unknown function (DUF3618)
YP_005003196.1	manually curated
YP_005003198.1	TIGRFAM: LPXTG-motif cell wall anchor domain; Deltaproteobacterial GC-motif protein sorting domain
YP_005003200.1	PFAM: GAF domain; ANTAR domain
YP_005003205.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005003206.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005003207.1	PFAM: Clp amino terminal domain
YP_005003208.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005003209.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005003210.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme
YP_005003212.1	PFAM: Acetyltransferase (GNAT) family
YP_005003213.1	PFAM: AFG1-like ATPase
YP_005003214.1	PFAM: RibD C-terminal domain
YP_005003215.1	PFAM: TAP-like protein
YP_005003216.1	PFAM: Protein of unknown function (DUF2029)
YP_005003217.1	PFAM: Domain of unknown function (DUF227)
YP_005003218.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005003219.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_005003221.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005003222.1	PFAM: Chlorite dismutase
YP_005003223.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_005003224.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_005003225.1	PFAM: Protein of unknown function (DUF3000); manually curated
YP_005003226.1	PFAM: 3'-5' exonuclease; HRDC domain
YP_005003227.1	PFAM: alpha/beta hydrolase fold
YP_005003228.1	PFAM: PhoD-like phosphatase
YP_005003229.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_005003230.1	PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_005003233.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); tRNA (Uracil-5-)-methyltransferase; TRAM domain
YP_005003235.1	PFAM: TrkA-N domain
YP_005003236.1	PFAM: TrkA-N domain; TrkA-C domain
YP_005003237.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005003238.1	PFAM: Protein of unknown function (DUF3159)
YP_005003241.1	PFAM: Protein of unknown function (DUF3710)
YP_005003242.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_005003243.1	PFAM: Protein of unknown function (DUF3093)
YP_005003246.1	PFAM: Inositol monophosphatase family
YP_005003247.1	PFAM: ROK family
YP_005003248.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_005003249.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_005003250.1	PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain; DNA binding domain, excisionase family
YP_005003251.1	PFAM: O-methyltransferase
YP_005003253.1	PFAM: Endoribonuclease L-PSP
YP_005003254.1	PFAM: Protein of unknown function (DUF952)
YP_005003256.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_005003257.1	PFAM: Protein of unknown function (DUF3039)
YP_005003258.1	PFAM: Protein of unknown function (DUF3099)
YP_005003259.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005003260.1	PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005003263.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005003264.1	PFAM: PAC2 family
YP_005003265.1	PFAM: alpha/beta hydrolase fold
YP_005003266.1	PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_005003267.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_005003268.1	PFAM: LysM domain
YP_005003269.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_005003270.1	PFAM: LGFP repeat
YP_005003271.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX
YP_005003272.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_005003273.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase
YP_005003276.1	PFAM: Domain of Unknown Function (DUF349); manually curated
YP_005003278.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family
YP_005003279.1	PFAM: ABC transporter
YP_005003280.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005003281.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005003282.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005003283.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family; probable F420-dependent oxidoreductase, Rv1855c family
YP_005003284.1	PFAM: RecX family
YP_005003285.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_005003286.1	PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_005003287.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_005003288.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA)
YP_005003289.1	PFAM: Nickel-dependent hydrogenase
YP_005003290.1	PFAM: NifU-like domain
YP_005003295.1	PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease
YP_005003296.1	PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_005003297.1	PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF
YP_005003298.1	PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_005003299.1	PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_005003300.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_005003302.1	PFAM: Protein of unknown function (DUF3046)
YP_005003303.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase
YP_005003304.1	PFAM: Limonene-1,2-epoxide hydrolase catalytic domain
YP_005003307.1	PFAM: PspA/IM30 family
YP_005003308.1	PFAM: Helix-turn-helix
YP_005003309.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; manually curated
YP_005003310.1	PFAM: Acetyltransferase (GNAT) family; manually curated
YP_005003311.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_005003312.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005003313.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005003314.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_005003315.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005003316.1	PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_005003318.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005003319.1	PFAM: Protein of unknown function (DUF1006)
YP_005003320.1	PFAM: Dihydrofolate reductase
YP_005003321.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_005003322.1	PFAM: Dienelactone hydrolase family
YP_005003323.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_005003324.1	PFAM: HNH endonuclease; Domain of unknown function DUF222
YP_005003326.1	PFAM: alpha/beta hydrolase fold
YP_005003327.1	PFAM: NADPH-dependent FMN reductase
YP_005003328.1	PFAM: Tetratricopeptide repeat
YP_005003329.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005003330.1	PFAM: AsnC family
YP_005003331.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase
YP_005003332.1	PFAM: SEC-C motif
YP_005003333.1	PFAM: Beta-lactamase
YP_005003334.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005003335.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase; guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
YP_005003337.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_005003338.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain
YP_005003339.1	PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; manually curated
YP_005003340.1	PFAM: alpha/beta hydrolase fold
YP_005003341.1	PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_005003342.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_005003343.1	PFAM: Calcineurin-like phosphoesterase
YP_005003346.1	PFAM: Sulfotransferase domain
YP_005003347.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003348.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family
YP_005003349.1	PFAM: Domain of unknown function (DUF1802)
YP_005003350.1	PFAM: Uncharacterized conserved protein (DUF2277)
YP_005003351.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003353.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated
YP_005003354.1	PFAM: DHH family; DHHA1 domain
YP_005003355.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_005003356.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_005003357.1	PFAM: Protein of unknown function (DUF448); manually curated
YP_005003358.1	PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA
YP_005003359.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_005003362.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_005003363.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005003364.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005003365.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain
YP_005003366.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase
YP_005003367.1	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase
YP_005003368.1	PFAM: von Willebrand factor type A domain; AAA domain (dynein-related subfamily)
YP_005003369.1	PFAM: Acetyltransferase (GNAT) family
YP_005003371.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mycothione reductase
YP_005003372.1	PFAM: High-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter, HoxN/HupN/NixA family
YP_005003373.1	PFAM: Methyltransferase domain
YP_005003375.1	PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal; NB-ARC domain
YP_005003376.1	PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form
YP_005003377.1	PFAM: Choline/ethanolamine kinase
YP_005003378.1	PFAM: MarR family
YP_005003379.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005003380.1	PFAM: short chain dehydrogenase
YP_005003381.1	PFAM: Aldehyde dehydrogenase family
YP_005003382.1	PFAM: Peptidase C26; manually curated
YP_005003383.1	PFAM: Glutamine synthetase, catalytic domain
YP_005003384.1	PFAM: Amino acid permease
YP_005003385.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing)
YP_005003386.1	PFAM: Acetyltransferase (GNAT) family; RimK-like ATP-grasp domain; TIGRFAM: GNAT-family acetyltransferase TIGR03103
YP_005003389.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_005003390.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005003391.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003394.1	PFAM: Domain of unknown function (DUF1707)
YP_005003395.1	PFAM: NTF2-like N-terminal transpeptidase domain; Penicillin binding protein transpeptidase domain
YP_005003397.1	PFAM: Acetyltransferase (GNAT) family
YP_005003398.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_005003399.1	PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_005003400.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_005003401.1	PFAM: Fasciclin domain
YP_005003402.1	PFAM: AhpC/TSA family; Cytochrome C biogenesis protein transmembrane region
YP_005003403.1	PFAM: Fasciclin domain
YP_005003404.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005003405.1	PFAM: NmrA-like family; manually curated
YP_005003406.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005003407.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_005003408.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003409.1	PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_005003410.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005003411.1	PFAM: Protein of unknown function (DUF2631)
YP_005003413.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005003414.1	PFAM: Domain of unknown function (DUF427)
YP_005003415.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003416.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003417.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005003418.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_005003419.1	PFAM: FAD binding domain
YP_005003420.1	PFAM: Cytochrome P450
YP_005003421.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003422.1	PFAM: MaoC like domain
YP_005003423.1	PFAM: Luciferase-like monooxygenase
YP_005003424.1	PFAM: Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003425.1	PFAM: Protein of unknown function (DUF2910)
YP_005003426.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005003427.1	PFAM: alpha/beta hydrolase fold
YP_005003428.1	PFAM: Flavin-binding monooxygenase-like
YP_005003429.1	PFAM: short chain dehydrogenase
YP_005003430.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_005003431.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005003432.1	PFAM: Cytochrome P450
YP_005003434.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_005003437.1	PFAM: Protein of unknown function (DUF1271)
YP_005003438.1	PFAM: Cytochrome P450
YP_005003439.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003440.1	PFAM: Domain of unknown function (DUF227)
YP_005003441.1	PFAM: Phosphotransferase enzyme family
YP_005003443.1	PFAM: CoA-transferase family III
YP_005003444.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003445.1	PFAM: Aldehyde dehydrogenase family
YP_005003447.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase
YP_005003448.1	PFAM: Cytidylyltransferase family
YP_005003449.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_005003450.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_005003451.1	PFAM: Thiopurine S-methyltransferase (TPMT)
YP_005003452.1	PFAM: MarR family
YP_005003453.1	PFAM: Arginase family
YP_005003454.1	PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_005003455.1	PFAM: Amidase
YP_005003456.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_005003457.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_005003458.1	PFAM: Peptidase family M23; manually curated
YP_005003459.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC
YP_005003460.1	PFAM: FMN-dependent dehydrogenase
YP_005003461.1	PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_005003462.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005003463.1	PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein
YP_005003464.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein
YP_005003465.1	PFAM: Domain of Unknown Function (DUF1206); manually curated
YP_005003466.1	PFAM: Bacterial protein of unknown function (DUF899)
YP_005003468.1	PFAM: Bacterial extracellular solute-binding protein
YP_005003469.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005003470.1	PFAM: ABC transporter; TOBE domain
YP_005003471.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme
YP_005003472.1	PFAM: Domain of unknown function DUF222
YP_005003473.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005003474.1	PFAM: CoA-transferase family III
YP_005003475.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005003476.1	PFAM: Arginase family
YP_005003478.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; manually curated
YP_005003482.1	TIGRFAM: Dyp-type peroxidase family
YP_005003484.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003485.1	PFAM: short chain dehydrogenase
YP_005003486.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005003487.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2516 family
YP_005003488.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003489.1	PFAM: Rieske [2Fe-2S] domain
YP_005003491.1	PFAM: CoA-transferase family III
YP_005003492.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_005003493.1	PFAM: Cytochrome P450
YP_005003496.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003497.1	PFAM: CoA-transferase family III
YP_005003498.1	PFAM: Dihydrodipicolinate synthetase family
YP_005003500.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; manually curated
YP_005003501.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003502.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005003503.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_005003504.1	PFAM: Cytochrome P450
YP_005003505.1	PFAM: Cytochrome P450
YP_005003506.1	PFAM: Aldehyde dehydrogenase family
YP_005003507.1	PFAM: short chain dehydrogenase
YP_005003510.1	PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal
YP_005003511.1	PFAM: von Willebrand factor type A domain
YP_005003512.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003513.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003514.1	PFAM: Amidohydrolase
YP_005003515.1	PFAM: Nitroreductase family
YP_005003517.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003518.1	PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_005003520.1	PFAM: Cytochrome P450
YP_005003521.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003522.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003523.1	PFAM: Protein of unknown function (DUF2469)
YP_005003524.1	PFAM: Ribonuclease HII
YP_005003525.1	PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005003526.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_005003527.1	PFAM: Beta-lactamase
YP_005003529.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_005003530.1	PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_005003532.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_005003533.1	PFAM: SnoaL-like polyketide cyclase
YP_005003535.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005003536.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005003537.1	PFAM: Amidohydrolase family
YP_005003538.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_005003539.1	PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; TIGRFAM: [Protein-PII] uridylyltransferase
YP_005003540.1	PFAM: Nitrogen regulatory protein P-II
YP_005003541.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005003542.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; manually curated
YP_005003543.1	PFAM: FMN-dependent dehydrogenase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2
YP_005003544.1	PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_005003545.1	PFAM: Acylphosphatase
YP_005003546.1	PFAM: OsmC-like protein
YP_005003547.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_005003548.1	PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_005003549.1	PFAM: Uncharacterized ACR, COG1399; manually curated
YP_005003551.1	PFAM: Hemerythrin HHE cation binding domain
YP_005003552.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_005003553.1	PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_005003554.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; HMGL-like; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase
YP_005003555.1	PFAM: Vitamin K epoxide reductase family
YP_005003557.1	PFAM: alpha/beta hydrolase fold
YP_005003558.1	PFAM: Aldo/keto reductase family
YP_005003559.1	PFAM: Aldo/keto reductase family
YP_005003560.1	PFAM: Domain of unknown function (DUF1994)
YP_005003561.1	PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_005003562.1	PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV
YP_005003563.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_005003564.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_005003565.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_005003566.1	PFAM: AsnC family
YP_005003567.1	PFAM: Protein of unknown function (DUF3515)
YP_005003568.1	PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005003569.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_005003570.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_005003571.1	PFAM: Guanylyl transferase CofC like; TIGRFAM: 2-phospho-L-lactate guanylyltransferase
YP_005003572.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_005003573.1	PFAM: NUDIX domain; Phosphoglycerate mutase family
YP_005003574.1	PFAM: Bacterial DNA-binding protein
YP_005003575.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_005003576.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_005003577.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_005003578.1	PFAM: Phosphoribosyl transferase domain; Erythromycin esterase
YP_005003579.1	PFAM: Domain of unknown function (DUF1876)
YP_005003582.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein; manually curated
YP_005003584.1	PFAM: Universal stress protein family
YP_005003585.1	PFAM: Universal stress protein family
YP_005003586.1	PFAM: Universal stress protein family
YP_005003587.1	PFAM: Domain of unknown function (DUF1918)
YP_005003588.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005003589.1	PFAM: Universal stress protein family
YP_005003590.1	PFAM: Universal stress protein family
YP_005003592.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_005003593.1	PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family
YP_005003594.1	PFAM: Major Facilitator Superfamily
YP_005003596.1	PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_005003597.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_005003598.1	PFAM: Thi4 family
YP_005003599.1	PFAM: Protein of unknown function (DUF2945)
YP_005003602.1	PFAM: Phosphoribosyl transferase domain
YP_005003603.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_005003604.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_005003605.1	PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_005003606.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005003607.1	PFAM: Protein of unknown function (DUF2581); manually curated
YP_005003608.1	PFAM: DoxX; manually curated
YP_005003610.1	PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
YP_005003611.1	PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase
YP_005003612.1	PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
YP_005003613.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
YP_005003616.1	PFAM: Protein of unknown function (DUF2510)
YP_005003617.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent
YP_005003618.1	PFAM: Protein of unknown function (DUF419)
YP_005003619.1	PFAM: AMP-binding enzyme
YP_005003621.1	PFAM: Bacterial regulatory protein, arsR family
YP_005003622.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_005003625.1	PFAM: Cobalamin-independent synthase, Catalytic domain
YP_005003628.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_005003629.1	PFAM: Aminotransferase class-V
YP_005003630.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005003632.1	PFAM: Nitroreductase family
YP_005003633.1	PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain
YP_005003634.1	PFAM: Electron transfer flavoprotein domain
YP_005003635.1	PFAM: Methyltransferase domain
YP_005003636.1	PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57
YP_005003637.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1
YP_005003638.1	PFAM: Carboxylesterase; manually curated; non-canonical start codon
YP_005003641.1	PFAM: Protein of unknown function (DUF3298)
YP_005003643.1	PFAM: Methyltransferase domain
YP_005003644.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003645.1	PFAM: NUDIX domain
YP_005003646.1	PFAM: ABC transporter
YP_005003647.1	PFAM: Uncharacterized BCR, YitT family COG1284
YP_005003649.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_005003650.1	PFAM: ACT domain; haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_005003651.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_005003652.1	PFAM: Periplasmic binding protein
YP_005003653.1	PFAM: YCII-related domain
YP_005003654.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005003655.1	PFAM: Protein of unknown function (DUF3349)
YP_005003656.1	PFAM: GAF domain
YP_005003657.1	PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_005003658.1	PFAM: Cutinase
YP_005003663.1	PFAM: Protein kinase domain
YP_005003664.1	PFAM: Ribonucleotide reductase, small chain
YP_005003665.1	PFAM: Flavin-binding monooxygenase-like
YP_005003667.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005003668.1	PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family
YP_005003669.1	PFAM: LysR substrate binding domain
YP_005003670.1	manually curated
YP_005003672.1	PFAM: Methyltransferase domain
YP_005003674.1	PFAM: ABC transporter
YP_005003677.1	PFAM: NUMOD3 motif
YP_005003678.1	PFAM: Ribonucleotide reductase N-terminal; Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_005003679.1	PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI
YP_005003680.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein NrdH
YP_005003681.1	PFAM: NADPH-dependent FMN reductase
YP_005003682.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003683.1	PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family
YP_005003684.1	PFAM: short chain dehydrogenase
YP_005003685.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003686.1	PFAM: Cytochrome P450
YP_005003688.1	manually curated
YP_005003689.1	PFAM: Sulfite exporter TauE/SafE
YP_005003690.1	PFAM: Phosphotransferase enzyme family
YP_005003691.1	PFAM: Putative neutral zinc metallopeptidase
YP_005003692.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005003693.1	PFAM: short chain dehydrogenase
YP_005003694.1	PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain
YP_005003695.1	PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
YP_005003696.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005003700.1	PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit
YP_005003701.1	PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_005003702.1	TIGRFAM: nitrate reductase, beta subunit
YP_005003703.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit
YP_005003704.1	PFAM: Major Facilitator Superfamily
YP_005003705.1	PFAM: Carbon starvation protein CstA
YP_005003706.1	PFAM: Protein of unknown function (DUF466)
YP_005003707.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_005003708.1	PFAM: MgtE intracellular N domain
YP_005003709.1	PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_005003710.1	PFAM: Cytochrome P450
YP_005003711.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2256 family
YP_005003712.1	PFAM: Carboxyl transferase domain
YP_005003713.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2249 family
YP_005003714.1	PFAM: SnoaL-like polyketide cyclase
YP_005003715.1	PFAM: Domain of unknown function (DUF227)
YP_005003716.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003718.1	PFAM: Flavin-binding monooxygenase-like
YP_005003719.1	PFAM: Fatty acid desaturase
YP_005003720.1	PFAM: Rieske [2Fe-2S] domain
YP_005003721.1	PFAM: Isochorismatase family
YP_005003722.1	PFAM: Thioesterase superfamily
YP_005003723.1	PFAM: AMP-binding enzyme
YP_005003724.1	PFAM: Aldehyde dehydrogenase family
YP_005003725.1	PFAM: short chain dehydrogenase
YP_005003726.1	PFAM: Cytochrome P450
YP_005003727.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003728.1	PFAM: CoA-transferase family III
YP_005003729.1	PFAM: Protein of unknown function (DUF2510)
YP_005003730.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_005003731.1	PFAM: Thiolase, C-terminal domain
YP_005003732.1	PFAM: short chain dehydrogenase
YP_005003733.1	PFAM: Amidohydrolase
YP_005003734.1	PFAM: short chain dehydrogenase
YP_005003735.1	PFAM: NAD dependent epimerase/dehydratase family; manually curated
YP_005003736.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003737.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003738.1	PFAM: Amidohydrolase
YP_005003739.1	PFAM: AMP-binding enzyme
YP_005003740.1	PFAM: Amidohydrolase
YP_005003741.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003742.1	PFAM: Dihydrodipicolinate synthetase family
YP_005003743.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003744.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_005003745.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005003746.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003747.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005003749.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003750.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003751.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003752.1	PFAM: AMP-binding enzyme
YP_005003753.1	PFAM: AMP-binding enzyme
YP_005003754.1	PFAM: AMP-binding enzyme
YP_005003755.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005003756.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003757.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005003758.1	PFAM: short chain dehydrogenase
YP_005003759.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003760.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005003761.1	PFAM: MaoC like domain
YP_005003762.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005003763.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005003764.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005003765.1	PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005003766.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003767.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003768.1	PFAM: EamA-like transporter family
YP_005003769.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003770.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003771.1	PFAM: Cytochrome P450
YP_005003772.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003773.1	PFAM: Rieske [2Fe-2S] domain
YP_005003774.1	PFAM: 2-nitropropane dioxygenase
YP_005003776.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005003778.1	PFAM: SPFH domain / Band 7 family
YP_005003779.1	PFAM: RNase H
YP_005003780.1	PFAM: Glycosyl hydrolases family 6
YP_005003781.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family
YP_005003787.1	PFAM: Uncharacterised protein family (UPF0089)
YP_005003788.1	PFAM: alpha/beta hydrolase fold
YP_005003789.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_005003790.1	PFAM: Amidohydrolase
YP_005003791.1	PFAM: CoA-transferase family III
YP_005003792.1	PFAM: alpha/beta hydrolase fold
YP_005003795.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005003800.1	PFAM: Excalibur calcium-binding domain
YP_005003802.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003803.1	PFAM: Protein of unknown function (DUF3297)
YP_005003804.1	PFAM: Protein kinase domain
YP_005003806.1	PFAM: Protein of unknown function (DUF732)
YP_005003807.1	PFAM: MMPL family; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; Transport protein
YP_005003809.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005003810.1	PFAM: Thioesterase superfamily
YP_005003811.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003812.1	PFAM: Cytochrome P450
YP_005003813.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003818.1	TIGRFAM: DNA binding domain, excisionase family
YP_005003820.1	PFAM: Phage integrase family
YP_005003821.1	PFAM: Sugar (and other) transporter; Major Facilitator Superfamily
YP_005003822.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific
YP_005003823.1	PFAM: Phosphoglycerate mutase family
YP_005003824.1	PFAM: Universal stress protein family
YP_005003825.1	PFAM: CrcB-like protein; Domain of unknown function (DUF543); TIGRFAM: crcB protein
YP_005003826.1	PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_005003827.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005003828.1	PFAM: AMP-binding enzyme
YP_005003830.1	PFAM: Siderophore biosynthesis protein domain
YP_005003834.1	PFAM: Bacterial regulatory proteins, tetR family; manually curated
YP_005003835.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005003836.1	PFAM: Patatin-like phospholipase
YP_005003837.1	PFAM: Aldehyde dehydrogenase family
YP_005003838.1	PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_005003839.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_005003840.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component
YP_005003841.1	PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC component; PTS system, glucose-like IIB component
YP_005003842.1	PFAM: AMP-binding enzyme
YP_005003843.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003844.1	PFAM: Nitroreductase family
YP_005003845.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003846.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003847.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005003848.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003849.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003850.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003851.1	PFAM: Amidohydrolase
YP_005003852.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003853.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005003854.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005003855.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_005003856.1	PFAM: Thiolase, C-terminal domain
YP_005003857.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005003858.1	PFAM: Amidohydrolase
YP_005003859.1	PFAM: AMP-binding enzyme
YP_005003860.1	PFAM: short chain dehydrogenase
YP_005003861.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003863.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003864.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003865.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003866.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_005003867.1	PFAM: AMP-binding enzyme
YP_005003868.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005003870.1	PFAM: short chain dehydrogenase; manually curated
YP_005003871.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003872.1	PFAM: Amidohydrolase
YP_005003873.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003875.1	PFAM: Luciferase-like monooxygenase
YP_005003876.1	PFAM: short chain dehydrogenase
YP_005003878.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005003879.1	PFAM: IclR helix-turn-helix domain
YP_005003880.1	PFAM: Domain of unknown function DUF222
YP_005003882.1	PFAM: AMP-binding enzyme
YP_005003883.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003884.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003885.1	PFAM: Amidohydrolase
YP_005003886.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003887.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003889.1	PFAM: Isochorismatase family
YP_005003890.1	PFAM: Amidohydrolase
YP_005003891.1	PFAM: MaoC like domain
YP_005003892.1	PFAM: CoA-transferase family III
YP_005003893.1	PFAM: Aldehyde dehydrogenase family
YP_005003894.1	PFAM: Cytochrome P450
YP_005003895.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003897.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005003898.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003899.1	PFAM: MaoC like domain
YP_005003901.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003903.1	PFAM: Cytochrome P450
YP_005003904.1	PFAM: CoA-transferase family III; manually curated; non-canonical start codon
YP_005003906.1	PFAM: AMP-binding enzyme
YP_005003908.1	PFAM: short chain dehydrogenase
YP_005003909.1	PFAM: short chain dehydrogenase
YP_005003914.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005003915.1	PFAM: short chain dehydrogenase; manually curated
YP_005003918.1	PFAM: Cytochrome P450
YP_005003919.1	PFAM: short chain dehydrogenase
YP_005003921.1	PFAM: BFD-like [2Fe-2S] binding domain; manually curated
YP_005003922.1	PFAM: short chain dehydrogenase; manually curated
YP_005003923.1	PFAM: short chain dehydrogenase
YP_005003924.1	PFAM: short chain dehydrogenase
YP_005003925.1	manually curated
YP_005003926.1	PFAM: short chain dehydrogenase
YP_005003928.1	PFAM: Cytochrome P450
YP_005003929.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003931.1	PFAM: Dihydrodipicolinate reductase, N-terminus
YP_005003932.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003933.1	PFAM: short chain dehydrogenase
YP_005003934.1	PFAM: Aldehyde dehydrogenase family
YP_005003935.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: oxidoreductase, Rxyl_3153 family
YP_005003936.1	PFAM: alpha/beta hydrolase fold
YP_005003937.1	PFAM: Diacylglycerol acyltransferase
YP_005003938.1	PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT
YP_005003939.1	PFAM: short chain dehydrogenase
YP_005003940.1	PFAM: FAD binding domain
YP_005003941.1	PFAM: short chain dehydrogenase
YP_005003942.1	PFAM: Amino acid permease
YP_005003943.1	PFAM: IclR helix-turn-helix domain
YP_005003945.1	PFAM: Metallo-beta-lactamase superfamily
YP_005003946.1	PFAM: short chain dehydrogenase
YP_005003947.1	PFAM: Luciferase-like monooxygenase
YP_005003948.1	PFAM: SNARE associated Golgi protein
YP_005003949.1	PFAM: Ribonucleotide reductase, small chain
YP_005003950.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, MSMEG_2906 family
YP_005003951.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005003953.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein
YP_005003954.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005003955.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: putative nitrilase, sll0784 family
YP_005003956.1	PFAM: Domain of unknown function DUF302
YP_005003957.1	PFAM: Carboxymuconolactone decarboxylase family
YP_005003958.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family
YP_005003959.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_005003961.1	PFAM: Rieske [2Fe-2S] domain
YP_005003962.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005003963.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005003964.1	PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein
YP_005003966.1	PFAM: Esterase PHB depolymerase
YP_005003967.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005003968.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_005003969.1	PFAM: MMPL family
YP_005003971.1	PFAM: alpha/beta hydrolase fold
YP_005003972.1	PFAM: alpha/beta hydrolase fold
YP_005003973.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_005003975.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005003976.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box
YP_005003977.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005003978.1	PFAM: ANTAR domain; PAS fold
YP_005003979.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005003980.1	PFAM: Integral membrane protein (intg_mem_TP0381); TIGRFAM: conserved hypothetical integral membrane protein TIGR02206
YP_005003981.1	PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain
YP_005003983.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005003984.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005003986.1	PFAM: CsbD-like
YP_005003989.1	PFAM: OsmC-like protein
YP_005003990.1	PFAM: Luciferase-like monooxygenase
YP_005003991.1	PFAM: MerR family regulatory protein
YP_005003992.1	PFAM: ANTAR domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005003993.1	PFAM: short chain dehydrogenase
YP_005003994.1	PFAM: CDP-alcohol phosphatidyltransferase
YP_005003995.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005003996.1	PFAM: Cytidylyltransferase family
YP_005003997.1	PFAM: ABC transporter; FHA domain; ABC-2 type transporter
YP_005003999.1	PFAM: Sulfotransferase domain
YP_005004000.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005004002.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_005004003.1	PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family
YP_005004004.1	PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family
YP_005004005.1	PFAM: Rieske [2Fe-2S] domain
YP_005004006.1	PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family
YP_005004007.1	PFAM: Sulfotransferase domain
YP_005004009.1	PFAM: Major Facilitator Superfamily
YP_005004010.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005004011.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_005004012.1	PFAM: Mycobacterium membrane protein
YP_005004013.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005004014.1	PFAM: Domain of unknown function (DUF1906); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; IMG reference gene:2509039886_SP