-- dump date 20140619_152126 -- class Genbank::CDS -- table cds_note -- id note YP_001131285.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mpa:MAP3286 IS1547_2 transposase YP_001131286.1 KEGG: mva:Mvan_0967 conserved hypothetical protein YP_001131287.1 KEGG: mva:Mvan_0966 conserved hypothetical protein YP_001131288.1 KEGG: mva:Mvan_0965 conserved hypothetical protein YP_001131289.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0964 mammalian cell entry related domain protein YP_001131290.1 PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0963 mammalian cell entry related domain protein YP_001131291.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0962 virulence factor Mce family protein YP_001131292.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0961 virulence factor Mce family protein YP_001131293.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0960 virulence factor Mce family protein YP_001131294.1 PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0959 mammalian cell entry related domain protein YP_001131295.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0958 protein of unknown function DUF140 YP_001131296.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0957 protein of unknown function DUF140 YP_001131297.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0116 hypothetical protein YP_001131298.1 KEGG: mva:Mvan_0956 conserved hypothetical protein YP_001131299.1 activates fatty acids by binding to coenzyme A YP_001131300.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mva:Mvan_0952 GntR domain protein YP_001131301.1 PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_0951 major facilitator superfamily MFS_1 YP_001131302.1 KEGG: mva:Mvan_0950 conserved hypothetical protein YP_001131303.1 PFAM: NodS family protein; Methyltransferase type 12; KEGG: rha:RHA1_ro00128 probable methyltransferase YP_001131304.1 PFAM: LmbE family protein; KEGG: mpa:MAP3239 hypothetical protein YP_001131305.1 KEGG: mav:MAV_4073 dehydrogenase YP_001131306.1 PFAM: glycosyl transferase, family 2; KEGG: msm:MSMEG_1097 glycosyl transferase, group 2 family protein YP_001131307.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_0949 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001131308.1 KEGG: mva:Mvan_0948 conserved hypothetical protein YP_001131309.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA YP_001131310.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0944 short-chain dehydrogenase/reductase SDR YP_001131311.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_0943 AMP-dependent synthetase and ligase YP_001131312.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_0942 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131313.1 KEGG: mva:Mvan_0941 conserved hypothetical protein YP_001131314.1 KEGG: mva:Mvan_0940 conserved hypothetical protein YP_001131315.1 PFAM: phosphate transporter; KEGG: mva:Mvan_0939 phosphate transporter YP_001131316.1 KEGG: mva:Mvan_0938 conserved hypothetical protein YP_001131317.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_0937 AMP-dependent synthetase and ligase YP_001131318.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_0936 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001131319.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mkm:Mkms_0723 two component transcriptional regulator, winged helix family YP_001131320.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: mva:Mvan_0884 integral membrane sensor signal transduction histidine kinase YP_001131321.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mva:Mvan_0883 2-nitropropane dioxygenase, NPD YP_001131322.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_001131323.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mva:Mvan_0879 ATPase associated with various cellular activities, AAA_3 YP_001131324.1 PFAM: protein of unknown function DUF58; KEGG: mva:Mvan_0878 protein of unknown function DUF58 YP_001131325.1 KEGG: mva:Mvan_0877 conserved hypothetical protein YP_001131326.1 KEGG: mva:Mvan_0876 conserved hypothetical protein YP_001131327.1 KEGG: mva:Mvan_0875 conserved hypothetical protein YP_001131328.1 KEGG: mva:Mvan_0874 conserved hypothetical protein YP_001131329.1 PFAM: protein of unknown function DUF1486; KEGG: mva:Mvan_0873 protein of unknown function DUF1486 YP_001131330.1 KEGG: mva:Mvan_0872 conserved hypothetical protein YP_001131331.1 KEGG: mva:Mvan_0871 hypothetical protein YP_001131332.1 KEGG: mva:Mvan_0870 conserved hypothetical protein YP_001131333.1 PFAM: cytochrome c assembly protein; KEGG: mva:Mvan_0869 cytochrome c assembly protein YP_001131334.1 PFAM: ResB family protein; KEGG: mva:Mvan_0868 ResB family protein YP_001131335.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mva:Mvan_0867 cytochrome c biogenesis protein, transmembrane region YP_001131336.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mva:Mvan_0866 redoxin domain protein YP_001131337.1 PFAM: Phosphoglycerate mutase; KEGG: mva:Mvan_0865 phosphoglycerate mutase YP_001131338.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001131339.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: mva:Mvan_0862 permease for cytosine/purines, uracil, thiamine, allantoin YP_001131340.1 PFAM: cytochrome P450; KEGG: msm:MSMEG_0968 cytochrome P450 YP_001131341.1 KEGG: mva:Mvan_0857 conserved hypothetical protein YP_001131342.1 KEGG: mva:Mvan_0856 hypothetical protein YP_001131343.1 PFAM: regulatory protein, LacI; regulatory protein, TetR; KEGG: mva:Mvan_0855 transcriptional regulator, TetR family YP_001131344.1 KEGG: mva:Mvan_0854 conserved hypothetical protein YP_001131345.1 KEGG: mkm:Mkms_0696 putative transmembrane protein YP_001131346.1 KEGG: mva:Mvan_0850 putative conserved transmembrane protein YP_001131347.1 KEGG: mva:Mvan_0849 conserved hypothetical protein YP_001131348.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001131349.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: mva:Mvan_0846 uroporphyrinogen III synthase HEM4 YP_001131350.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_001131351.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001131352.1 PFAM: glutaredoxin 2; KEGG: mkm:Mkms_0688 glutaredoxin 2 YP_001131353.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_0843 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_001131354.1 KEGG: mva:Mvan_0842 MaoC-like dehydratase YP_001131355.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mva:Mvan_0841 phospholipid/glycerol acyltransferase YP_001131356.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mva:Mvan_0840 NAD-dependent epimerase/dehydratase YP_001131357.1 PFAM: Protein of unknown function DUF1713; KEGG: rha:RHA1_ro02059 hypothetical protein YP_001131358.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: mva:Mvan_0838 DNA binding domain, excisionase family YP_001131359.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_001131360.1 KEGG: mva:Mvan_0836 conserved hypothetical protein YP_001131361.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mva:Mvan_0835 xylose isomerase domain protein TIM barrel YP_001131362.1 KEGG: mva:Mvan_0834 conserved hypothetical protein YP_001131363.1 PFAM: Ppx/GppA phosphatase; KEGG: mva:Mvan_0833 Ppx/GppA phosphatase YP_001131364.1 KEGG: mva:Mvan_0832 conserved hypothetical protein YP_001131365.1 PFAM: YCII-related; KEGG: mkm:Mkms_0675 YCII-related YP_001131366.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mva:Mvan_0831 two component transcriptional regulator, winged helix family YP_001131367.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: mva:Mvan_0830 histidine kinase YP_001131368.1 KEGG: mva:Mvan_0829 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase YP_001131369.1 KEGG: mva:Mvan_0828 conserved hypothetical protein YP_001131370.1 PFAM: glycosyl transferase, group 1; KEGG: mva:Mvan_0827 glycosyl transferase, group 1 YP_001131371.1 PFAM: ROK family protein; KEGG: mva:Mvan_0826 ROK family protein YP_001131372.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0825 short-chain dehydrogenase/reductase SDR YP_001131373.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mva:Mvan_0824 ErfK/YbiS/YcfS/YnhG family protein YP_001131374.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_001131375.1 KEGG: mva:Mvan_0822 conserved hypothetical protein YP_001131376.1 KEGG: mva:Mvan_0821 conserved hypothetical protein YP_001131377.1 PFAM: Na+/solute symporter; KEGG: mva:Mvan_0815 Na+/solute symporter YP_001131378.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mva:Mvan_0814 arginase/agmatinase/formiminoglutamase YP_001131379.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mva:Mvan_0813 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001131380.1 KEGG: mva:Mvan_0812 conserved hypothetical protein YP_001131381.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_001131382.1 KEGG: mva:Mvan_0810 conserved hypothetical protein YP_001131383.1 KEGG: mva:Mvan_0809 conserved membrane protein YP_001131384.1 KEGG: mva:Mvan_0808 conserved hypothetical protein YP_001131385.1 PFAM: helix-turn-helix domain protein; KEGG: mva:Mvan_0807 transcriptional regulator, XRE family YP_001131386.1 PFAM: protein of unknown function DUF445; KEGG: mkm:Mkms_0654 protein of unknown function DUF445 YP_001131387.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_0653 transcriptional regulator, TetR family YP_001131388.1 PFAM: protein of unknown function DUF344; KEGG: mva:Mvan_0804 protein of unknown function DUF344 YP_001131389.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001131390.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mva:Mvan_0801 isocitrate lyase YP_001131391.1 PFAM: acyl-ACP thioesterase; KEGG: mva:Mvan_0800 acyl-ACP thioesterase YP_001131392.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: mva:Mvan_0799 protein of unknown function DUF955 YP_001131393.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_0798 carboxymuconolactone decarboxylase YP_001131394.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_0797 alpha/beta hydrolase fold YP_001131395.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mva:Mvan_0796 diguanylate cyclase YP_001131396.1 KEGG: mva:Mvan_0795 conserved hypothetical protein YP_001131397.1 E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component YP_001131398.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdi:DIP2125 putative ABC transport system, ATP-binding subunit YP_001131399.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdi:DIP2126 putative binding-protein-dependent integral membrane transport protein YP_001131400.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP2126 putative binding-protein-dependent integral membrane transport protein YP_001131401.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP2127 putative binding-protein-dependent integral membrane transport protein YP_001131402.1 PFAM: extracellular solute-binding protein, family 5; KEGG: cdi:DIP2128 putative substrate-binding transport protein YP_001131403.1 KEGG: mva:Mvan_0793 conserved hypothetical protein YP_001131404.1 KEGG: mva:Mvan_0792 conserved hypothetical protein YP_001131405.1 PFAM: protein of unknown function DUF779; KEGG: mva:Mvan_0791 protein of unknown function DUF779 YP_001131406.1 PFAM: transcriptional regulator domain protein; GAF domain protein; KEGG: mva:Mvan_0790 putative GAF sensor protein YP_001131407.1 TIGRFAM: acetoin reductases; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0789 acetoin reductases YP_001131408.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_0788 alcohol dehydrogenase GroES domain protein YP_001131409.1 KEGG: mva:Mvan_0787 conserved hypothetical protein YP_001131410.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: mva:Mvan_0785 prolyl oligopeptidase YP_001131411.1 KEGG: msm:MSMEG_5514 hypothetical protein YP_001131412.1 KEGG: mva:Mvan_0784 hypothetical protein YP_001131413.1 KEGG: sco:SCO2360 hypothetical protein YP_001131414.1 KEGG: mva:Mvan_0773 conserved hypothetical protein YP_001131415.1 PFAM: aldehyde dehydrogenase; KEGG: mva:Mvan_0771 aldehyde dehydrogenase YP_001131416.1 KEGG: mva:Mvan_0770 phosphoesterase, PA-phosphatase related YP_001131417.1 KEGG: mva:Mvan_0769 conserved hypothetical protein YP_001131418.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mkm:Mkms_0623 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131419.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: mva:Mvan_0767 amidohydrolase 3 YP_001131420.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: msm:MSMEG_6536 carboxymuconolactone decarboxylase YP_001131421.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro01884 probable short chain dehydrogenase YP_001131422.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_0766 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001131423.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mkm:Mkms_4964 major facilitator superfamily MFS_1 YP_001131424.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001131425.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0763 transcriptional regulator, TetR family YP_001131426.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0762 short-chain dehydrogenase/reductase SDR YP_001131427.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_0760 cupin 2, conserved barrel domain protein YP_001131428.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: mva:Mvan_0759 type III restriction enzyme, res subunit YP_001131429.1 KEGG: mva:Mvan_0758 conserved hypothetical protein YP_001131430.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_0756 HAD-superfamily hydrolase, subfamily IIA YP_001131431.1 PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; KEGG: mva:Mvan_1919 putative transcriptional regulator, MerR family YP_001131432.1 PFAM: membrane-flanked domain; KEGG: mva:Mvan_0755 membrane-flanked domain YP_001131433.1 PFAM: membrane-flanked domain; KEGG: mva:Mvan_0754 membrane-flanked domain YP_001131434.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_0753 short-chain dehydrogenase/reductase SDR YP_001131435.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: mva:Mvan_0752 molybdenum cofactor synthesis domain YP_001131436.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_001131437.1 KEGG: mva:Mvan_0750 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_001131438.1 KEGG: mva:Mvan_0749 vesicle-fusing ATPase; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase YP_001131439.1 KEGG: msm:MSMEG_0722 hypothetical protein YP_001131440.1 KEGG: msm:MSMEG_0078 hypothetical protein YP_001131441.1 KEGG: msm:MSMEG_0079 hypothetical protein YP_001131442.1 PFAM: protein of unknown function DUF1707; KEGG: mva:Mvan_0748 protein of unknown function DUF1707 YP_001131443.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_001131444.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mva:Mvan_0745 TrkA-N domain protein YP_001131445.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_001131446.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_001131447.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone YP_001131448.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_001131449.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_001131450.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_001131451.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mva:Mvan_0738 putative methyltransferase YP_001131452.1 KEGG: msm:MSMEG_0842 hypothetical protein YP_001131453.1 PFAM: peptidase S16, lon domain protein; KEGG: mva:Mvan_0737 peptidase S16, lon domain protein YP_001131454.1 ATP-dependent carboxylate-amine ligase YP_001131455.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: mva:Mvan_0735 superoxide dismutase, copper/zinc binding YP_001131456.1 KEGG: mva:Mvan_0734 putative tuberculin related peptide YP_001131457.1 KEGG: mva:Mvan_0733 transcriptional regulator, fis family YP_001131458.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001131459.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_0731 GCN5-related N-acetyltransferase YP_001131460.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mva:Mvan_0730 exodeoxyribonuclease III Xth YP_001131461.1 KEGG: mva:Mvan_3506 conserved hypothetical protein YP_001131462.1 PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mva:Mvan_0728 protein of unknown function DUF222 YP_001131463.1 KEGG: mva:Mvan_0727 hypothetical protein YP_001131464.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_001131465.1 KEGG: mva:Mvan_0723 conserved hypothetical protein YP_001131466.1 KEGG: mva:Mvan_0722 conserved hypothetical protein YP_001131467.1 KEGG: mva:Mvan_0721 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001131468.1 KEGG: mva:Mvan_0720 conserved hypothetical protein YP_001131469.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0719 transcriptional regulator, TetR family YP_001131470.1 PFAM: amino acid permease-associated region; Amino acid transporter, transmembrane; KEGG: mva:Mvan_0718 amino acid permease-associated region YP_001131471.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mva:Mvan_0717 uracil-xanthine permease YP_001131472.1 PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; KEGG: mva:Mvan_0716 aminopeptidase Y YP_001131473.1 PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; KEGG: mva:Mvan_0715 aminopeptidase Y YP_001131474.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_0714 alpha/beta hydrolase fold YP_001131475.1 KEGG: mva:Mvan_0713 putative ABC transporter membrane protein YP_001131476.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_0712 ABC transporter-related protein YP_001131477.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mva:Mvan_0711 conserved hypothetical protein YP_001131478.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_001131479.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate YP_001131480.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mva:Mvan_0708 glycine oxidase ThiO YP_001131481.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_001131482.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_0706 NUDIX hydrolase YP_001131483.1 KEGG: mva:Mvan_0705 putative conserved membrane protein YP_001131484.1 PFAM: extracellular solute-binding protein, family 3; KEGG: mva:Mvan_0704 extracellular solute-binding protein, family 3 YP_001131485.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mva:Mvan_0703 protein kinase YP_001131486.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_0702 anti-sigma-factor antagonist YP_001131487.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_001131488.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate YP_001131489.1 KEGG: mkm:Mkms_0548 hypothetical protein YP_001131490.1 KEGG: mkm:Mkms_0547 conserved hypothetical protein YP_001131491.1 KEGG: mkm:Mkms_0546 conserved hypothetical protein YP_001131492.1 KEGG: mkm:Mkms_0545 conserved hypothetical protein YP_001131493.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mva:Mvan_0699 endonuclease/exonuclease/phosphatase YP_001131494.1 PFAM: luciferase family protein; KEGG: mva:Mvan_0698 luciferase family protein YP_001131495.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_0697 beta-lactamase domain protein YP_001131496.1 KEGG: mva:Mvan_0696 conserved hypothetical protein YP_001131497.1 KEGG: mav:MAV_2048 fmnh2-utilizing oxygenase YP_001131498.1 PFAM: luciferase family protein; KEGG: mav:MAV_2049 hypothetical protein YP_001131499.1 KEGG: mav:MAV_2050 fmnh2-utilizing oxygenase YP_001131500.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: msm:MSMEG_0771 hypothetical oxidoreductase YqjQ YP_001131501.1 KEGG: mva:Mvan_0689 conserved hypothetical protein YP_001131502.1 KEGG: mva:Mvan_0688 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes YP_001131503.1 SMART: Rhodanese domain protein; KEGG: mkm:Mkms_0537 rhodanese domain protein YP_001131504.1 KEGG: mva:Mvan_0686 conserved hypothetical protein YP_001131505.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; KEGG: mva:Mvan_0685 ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp YP_001131506.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_0684 transcriptional regulator, MarR family YP_001131507.1 PFAM: MMPL domain protein; KEGG: mva:Mvan_0683 MmpL domain protein YP_001131508.1 PFAM: cytochrome P450; KEGG: mva:Mvan_0682 cytochrome P450 YP_001131509.1 KEGG: mva:Mvan_0680 conserved hypothetical protein YP_001131510.1 PFAM: thioesterase superfamily protein; KEGG: mva:Mvan_0678 thioesterase superfamily protein YP_001131511.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001131512.1 KEGG: mva:Mvan_0676 conserved hypothetical protein YP_001131513.1 PFAM: peptidase M50; KEGG: mva:Mvan_0674 peptidase M50 YP_001131514.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mva:Mvan_0673 cation diffusion facilitator family transporter YP_001131515.1 KEGG: mva:Mvan_0672 conserved hypothetical protein YP_001131516.1 KEGG: mva:Mvan_0671 conserved hypothetical protein YP_001131517.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_001131519.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_0669 alcohol dehydrogenase GroES domain protein YP_001131520.1 KEGG: mva:Mvan_0668 conserved hypothetical protein YP_001131521.1 PFAM: DSBA oxidoreductase; Na+/H+ antiporter NhaA; KEGG: mva:Mvan_0667 Na+/H+ antiporter NhaA YP_001131522.1 PFAM: glycoside hydrolase, family 76; KEGG: mva:Mvan_0666 glycoside hydrolase, family 76 YP_001131523.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0665 transcriptional regulator, TetR family YP_001131524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_0664 major facilitator superfamily MFS_1 YP_001131525.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mva:Mvan_0663 tRNA/rRNA methyltransferase (SpoU) YP_001131526.1 KEGG: mva:Mvan_0662 conserved hypothetical protein YP_001131527.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_0661 short-chain dehydrogenase/reductase SDR YP_001131528.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_0659 ATPase AAA-2 domain protein YP_001131529.1 KEGG: mva:Mvan_0658 narrowly conserved hypothetical protein YP_001131530.1 PFAM: Na+/solute symporter; KEGG: pcr:Pcryo_1604 Na+/solute symporter YP_001131532.1 KEGG: oih:OB2778 thermophilic desulfurizing enzyme YP_001131533.1 KEGG: mkm:Mkms_5271 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131534.1 KEGG: mva:Mvan_0642 conserved hypothetical protein YP_001131535.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0641 transcriptional regulator, TetR family YP_001131536.1 KEGG: mva:Mvan_0640 conserved hypothetical protein YP_001131537.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mva:Mvan_0639 oxidoreductase FAD-binding domain protein YP_001131538.1 PFAM: Aldose 1-epimerase; KEGG: mva:Mvan_0638 aldose 1-epimerase YP_001131539.1 PFAM: regulatory protein, MerR; KEGG: mva:Mvan_0637 putative transcriptional regulator, MerR family YP_001131540.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001131541.1 PFAM: GrpE protein; KEGG: mva:Mvan_0635 GrpE protein YP_001131542.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001131543.1 KEGG: mva:Mvan_0633 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001131544.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001131545.1 KEGG: msm:MSMEG_3942 hypothetical protein YP_001131546.1 KEGG: mva:Mvan_0631 putative lipoprotein LpqJ YP_001131547.1 catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide YP_001131548.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001131549.1 KEGG: mva:Mvan_0630 conserved hypothetical protein YP_001131550.1 PFAM: luciferase family protein; KEGG: mva:Mvan_0629 luciferase family protein YP_001131551.1 KEGG: mva:Mvan_0628 hypothetical protein YP_001131552.1 KEGG: mva:Mvan_0627 conserved hypothetical protein YP_001131553.1 KEGG: mkm:Mkms_0459 conserved hypothetical proline rich protein YP_001131554.1 KEGG: mkm:Mkms_0458 isoniazid inductible gene protein IniC YP_001131555.1 KEGG: mkm:Mkms_0457 conserved hypothetical protein YP_001131556.1 KEGG: mva:Mvan_0623 conserved hypothetical protein YP_001131557.1 KEGG: mva:Mvan_0622 conserved hypothetical protein YP_001131558.1 KEGG: mva:Mvan_0621 conserved hypothetical proline and threonine rich protein YP_001131559.1 PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: mkm:Mkms_0453 response regulator receiver protein YP_001131560.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mva:Mvan_0619 protein of unknown function DUF224, cysteine-rich region domain protein YP_001131561.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_001131563.1 PFAM: YibE/F family protein; KEGG: mva:Mvan_0617 YibE/F family protein YP_001131564.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: msm:MSMEG_0686 oxidoreductase YP_001131565.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: msm:MSMEG_0685 oxidoreductase, molybdopterin-binding subunit YP_001131566.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mkm:Mkms_0447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001131567.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mkm:Mkms_0446 glucose-1-phosphate thymidylyltransferase YP_001131568.1 KEGG: mva:Mvan_0602 conserved hypothetical protein YP_001131569.1 PFAM: protein of unknown function DUF1503; KEGG: mva:Mvan_0601 protein of unknown function DUF1503 YP_001131570.1 PFAM: cytochrome P450; KEGG: mva:Mvan_0600 cytochrome P450 YP_001131571.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mva:Mvan_0598 UDP-glucose 6-dehydrogenase YP_001131572.1 KEGG: mva:Mvan_0590 conserved hypothetical protein YP_001131573.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_001131574.1 KEGG: msm:MSMEG_6033 hypothetical protein YP_001131575.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: fra:Francci3_0673 filamentation induced by cAMP protein Fic YP_001131577.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mav:MAV_4982 short-chain dehydrogenase/reductase SDR YP_001131578.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_0610 putative 3-oxoacyl-(acyl-carrier-protein) reductase YP_001131579.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4666 transcriptional regulator, TetR family YP_001131580.1 PFAM: glycoside hydrolase, family 16; KEGG: mva:Mvan_0446 glycoside hydrolase, family 16 YP_001131581.1 PFAM: Lipocalin family protein; KEGG: mva:Mvan_0445 lipocalin family protein YP_001131582.1 PFAM: PGAP1 family protein; KEGG: mkm:Mkms_1215 PGAP1 family protein YP_001131583.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro05093 multidrug transporter, MFS superfamily YP_001131584.1 KEGG: mmc:Mmcs_0421 hypothetical protein YP_001131585.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mmu:56196 Traf and Tnf receptor associated protein YP_001131586.1 PFAM: monooxygenase, FAD-binding; KEGG: mva:Mvan_0442 monooxygenase, FAD-binding YP_001131587.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0441 short-chain dehydrogenase/reductase SDR YP_001131588.1 KEGG: mva:Mvan_0440 hypothetical protein YP_001131589.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: mva:Mvan_0439 L-lactate dehydrogenase YP_001131590.1 KEGG: mva:Mvan_0433 conserved hypothetical proline and threonine rich protein YP_001131591.1 KEGG: mva:Mvan_0432 conserved hypothetical protein YP_001131592.1 KEGG: mva:Mvan_0431 putative conserved exported protein YP_001131593.1 PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase, catalytic region; KEGG: mva:Mvan_0430 phosphoesterase, PA-phosphatase related YP_001131594.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: mva:Mvan_0429 phosphoesterase, PA-phosphatase related YP_001131595.1 KEGG: mva:Mvan_0428 conserved hypothetical protein YP_001131596.1 PFAM: HNH endonuclease; protein of unknown function DUF222; KEGG: mva:Mvan_0426 protein of unknown function DUF222 YP_001131597.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001131598.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate YP_001131599.1 KEGG: mva:Mvan_0423 conserved hypothetical protein YP_001131600.1 KEGG: mva:Mvan_0423 conserved hypothetical protein YP_001131601.1 KEGG: mva:Mvan_0422 putative conserved transmembrane protein YP_001131602.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mva:Mvan_0421 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001131603.1 PFAM: protein of unknown function DUF571; KEGG: mva:Mvan_0420 protein of unknown function DUF571 YP_001131604.1 KEGG: mva:Mvan_0419 putative DNA-binding protein YP_001131605.1 KEGG: mva:Mvan_0418 conserved hypothetical protein YP_001131606.1 KEGG: mva:Mvan_0417 conserved hypothetical protein YP_001131607.1 PFAM: PPE protein; KEGG: mva:Mvan_0415 PPE protein YP_001131608.1 PFAM: PE domain protein; KEGG: mva:Mvan_0414 PE domain protein YP_001131609.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mva:Mvan_0413 cell divisionFtsK/SpoIIIE YP_001131610.1 PFAM: protein of unknown function DUF690; KEGG: mva:Mvan_0412 protein of unknown function DUF690 YP_001131611.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_0411 AAA ATPase, central domain protein YP_001131612.1 KEGG: mva:Mvan_0410 conserved hypothetical protein YP_001131613.1 KEGG: mva:Mvan_0409 FadD27 YP_001131614.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_0408 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131615.1 KEGG: mva:Mvan_0405 conserved hypothetical protein YP_001131616.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: mva:Mvan_0404 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001131617.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_0403 acyl-CoA dehydrogenase domain protein YP_001131618.1 KEGG: mkm:Mkms_5338 hypothetical protein YP_001131619.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: mkm:Mkms_5339 cupin 4 family protein YP_001131620.1 PFAM: Sucraseferredoxin family protein; KEGG: mkm:Mkms_5340 sucraseferredoxin family protein YP_001131621.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: art:Arth_3390 amine oxidase YP_001131622.1 KEGG: mva:Mvan_0402 conserved hypothetical protein YP_001131623.1 activates fatty acids by binding to coenzyme A YP_001131624.1 PFAM: DNA primase, small subunit; KEGG: mva:Mvan_0396 conserved hypothetical protein YP_001131625.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_0395 anti-sigma-factor antagonist YP_001131626.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_0394 acyl-CoA dehydrogenase domain protein YP_001131627.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_0393 acyl-CoA dehydrogenase domain protein YP_001131628.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mva:Mvan_0392 xanthine/uracil/vitamin C permease YP_001131629.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: rha:RHA1_ro01797 sulfite reductase [NADPH] flavoprotein alpha-component YP_001131630.1 KEGG: mva:Mvan_0389 conserved hypothetical protein YP_001131631.1 PFAM: protein of unknown function UPF0089; KEGG: mul:MUL_1818 hypothetical protein YP_001131632.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0384 transcriptional regulator, TetR family YP_001131633.1 PFAM: amidohydrolase 2; KEGG: mva:Mvan_0383 amidohydrolase 2 YP_001131634.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mva:Mvan_0382 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001131635.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: mva:Mvan_0381 cob(II)yrinic acid a,c-diamide reductase YP_001131636.1 PFAM: Radical SAM domain protein; KEGG: mkm:Mkms_2710 radical SAM domain protein YP_001131637.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: mva:Mvan_0379 cobalbumin biosynthesis enzyme YP_001131638.1 PFAM: purine catabolism PurC domain protein; KEGG: mkm:Mkms_0359 transcriptional regulator, fis family YP_001131639.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mva:Mvan_1824 methylmalonate-semialdehyde dehydrogenase YP_001131640.1 PFAM: aminotransferase class-III; KEGG: mva:Mvan_1823 aminotransferase class-III YP_001131641.1 KEGG: mva:Mvan_0378 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_001131642.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_001131643.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_001131644.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001131645.1 PFAM: cytochrome P450; KEGG: mva:Mvan_0373 cytochrome P450 YP_001131646.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0372 transcriptional regulator, TetR family YP_001131647.1 KEGG: mva:Mvan_0370 hypothetical protein YP_001131648.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0369 transcriptional regulator, TetR family YP_001131649.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: mva:Mvan_0338 NAD-dependent epimerase/dehydratase YP_001131650.1 KEGG: mkm:Mkms_1836 NAD-dependent epimerase/dehydratase YP_001131651.1 KEGG: mva:Mvan_0337 conserved hypothetical protein YP_001131652.1 KEGG: mva:Mvan_0333 hypothetical protein YP_001131653.1 KEGG: mva:Mvan_0332 hypothetical protein YP_001131654.1 KEGG: mpa:MAP1745c hypothetical protein YP_001131655.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mva:Mvan_0310 lysine exporter protein (LysE/YggA) YP_001131656.1 KEGG: mva:Mvan_0309 conserved hypothetical protein YP_001131657.1 PFAM: periplasmic binding protein; KEGG: mva:Mvan_0308 periplasmic binding protein YP_001131658.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: mva:Mvan_0307 conserved hypothetical integral membrane protein YP_001131659.1 PFAM: Allophanate hydrolase subunit 1; KEGG: mva:Mvan_0304 allophanate hydrolase subunit 1 YP_001131660.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: mva:Mvan_0303 UreA amidolyase related protein YP_001131661.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_0302 GCN5-related N-acetyltransferase YP_001131662.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane YP_001131663.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mva:Mvan_0300 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001131664.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_4654 integrase, catalytic region YP_001131665.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mva:Mvan_0299 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001131666.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_0306 integrase, catalytic region YP_001131667.1 KEGG: mva:Mvan_0305 hypothetical protein YP_001131668.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: mva:Mvan_0298 nitrite reductase (NAD(P)H), small subunit YP_001131669.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mkm:Mkms_0268 nitrite reductase (NAD(P)H), large subunit YP_001131670.1 PFAM: heat shock protein Hsp20; KEGG: mva:Mvan_0296 heat shock protein HSP20 YP_001131671.1 KEGG: mva:Mvan_0295 conserved hypothetical protein YP_001131672.1 PFAM: UspA domain protein; KEGG: mva:Mvan_3342 UspA domain protein YP_001131673.1 KEGG: mva:Mvan_0289 conserved hypothetical protein YP_001131674.1 KEGG: mkm:Mkms_0265 conserved hypothetical protein YP_001131675.1 KEGG: mva:Mvan_0287 putative succinate dehydrogenase (membrane anchor subunit) (succinic dehydrogenase) YP_001131676.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001131677.1 catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source YP_001131678.1 KEGG: mva:Mvan_0282 conserved hypothetical protein YP_001131679.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: sco:SCO1299 transcriptional regulatory protein YP_001131680.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_0281 acyl-CoA dehydrogenase domain protein YP_001131681.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: mva:Mvan_0279 flavin reductase domain protein, FMN-binding YP_001131682.1 KEGG: mva:Mvan_0277 conserved hypothetical protein YP_001131683.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: msm:MSMEG_0412 hypothetical protein YP_001131684.1 activates fatty acids by binding to coenzyme A YP_001131685.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mkm:Mkms_0256 transport protein YP_001131686.1 PFAM: condensation domain protein; KEGG: mva:Mvan_0270 condensation domain protein YP_001131687.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR; KEGG: mva:Mvan_0269 beta-ketoacyl synthase YP_001131688.1 PFAM: TspO/MBR family protein; KEGG: mva:Mvan_0268 TspO and MBR like proteins YP_001131689.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0267 short-chain dehydrogenase/reductase SDR YP_001131690.1 PFAM: dihydrodipicolinate reductase; KEGG: mva:Mvan_0266 dihydrodipicolinate reductase YP_001131691.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_0265 acyl-CoA dehydrogenase domain protein YP_001131692.1 PFAM: luciferase family protein; KEGG: mva:Mvan_0261 luciferase family protein YP_001131693.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001131694.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001131695.1 PFAM: MaoC domain protein dehydratase; KEGG: mva:Mvan_0258 MaoC domain protein dehydratase YP_001131696.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0257 transcriptional regulator, TetR family YP_001131697.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: mva:Mvan_0256 beta-N-acetylhexosaminidase YP_001131698.1 PFAM: UspA domain protein; KEGG: mva:Mvan_0255 UspA domain protein YP_001131699.1 KEGG: mva:Mvan_0254 small secreted protein YP_001131700.1 KEGG: mva:Mvan_0253 putative conserved transmembrane protein YP_001131701.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_0252 AMP-dependent synthetase and ligase YP_001131702.1 PFAM: acyltransferase 3; KEGG: mva:Mvan_0251 acyltransferase 3 YP_001131703.1 KEGG: mva:Mvan_0250 conserved hypothetical protein YP_001131704.1 KEGG: mva:Mvan_0249 conserved hypothetical protein YP_001131705.1 KEGG: mva:Mvan_0247 conserved hypothetical protein YP_001131706.1 KEGG: mav:MAV_0111 hypothetical protein YP_001131707.1 PFAM: cytochrome P450; KEGG: mva:Mvan_0246 cytochrome P450 YP_001131708.1 PFAM: glycosyl transferase, group 1; KEGG: mva:Mvan_0242 glycosyl transferase, group 1 YP_001131709.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_0241 methyltransferase type 11 YP_001131710.1 PFAM: aldehyde dehydrogenase; KEGG: mva:Mvan_0240 betaine-aldehyde dehydrogenase YP_001131711.1 KEGG: mva:Mvan_0239 conserved hypothetical protein YP_001131712.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_0238 acyl-CoA dehydrogenase domain protein YP_001131713.1 KEGG: mva:Mvan_0237 bifunctional deaminase-reductase-like protein YP_001131714.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mva:Mvan_0236 helix-turn-helix-domain containing protein, AraC type YP_001131715.1 PFAM: N-acetyltransferase; KEGG: mva:Mvan_0235 arylamine N-acetyltransferase YP_001131716.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mva:Mvan_0233 phospholipid/glycerol acyltransferase YP_001131717.1 activates fatty acids by binding to coenzyme A YP_001131718.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mva:Mvan_0231 alpha/beta hydrolase fold-3 domain protein YP_001131719.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0230 putative transcriptional regulator, TetR family YP_001131720.1 KEGG: mva:Mvan_0229 hypothetical protein YP_001131721.1 PFAM: protein of unknown function UPF0089; KEGG: mva:Mvan_0228 protein of unknown function UPF0089 YP_001131722.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mva:Mvan_0227 alpha/beta hydrolase fold-3 domain protein YP_001131723.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_0226 acyl-CoA dehydrogenase domain protein YP_001131724.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mva:Mvan_0225 alpha/beta hydrolase fold-3 domain protein YP_001131725.1 PFAM: Amidohydrolase 3; KEGG: mva:Mvan_0224 amidohydrolase 3 YP_001131726.1 KEGG: mva:Mvan_0223 conserved hypothetical protein YP_001131727.1 KEGG: mva:Mvan_0222 conserved hypothetical protein YP_001131728.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_0221 butyryl-CoA dehydrogenase YP_001131729.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mva:Mvan_0220 regulatory protein GntR, HTH YP_001131730.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mva:Mvan_0219 enoyl-CoA hydratase/isomerase YP_001131731.1 activates fatty acids by binding to coenzyme A YP_001131732.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mpa:MAP3286 IS1547_2 transposase YP_001131733.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_001131734.1 KEGG: mva:Mvan_0200 conserved hypothetical protein YP_001131735.1 KEGG: mva:Mvan_0199 conserved hypothetical protein YP_001131736.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_001131737.1 KEGG: mva:Mvan_0197 conserved hypothetical protein YP_001131738.1 KEGG: mkm:Mkms_0180 drug exporters of the RND superfamily-like protein YP_001131739.1 PFAM: protein of unknown function UPF0118; KEGG: mva:Mvan_0195 protein of unknown function UPF0118 YP_001131740.1 PFAM: conserved hypothetical protein 374; KEGG: mva:Mvan_0194 conserved hypothetical protein 374 YP_001131741.1 KEGG: mva:Mvan_0193 putative conserved transmembrane protein YP_001131742.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mva:Mvan_0192 integral membrane sensor signal transduction histidine kinase YP_001131743.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mva:Mvan_0191 two component transcriptional regulator, winged helix family YP_001131744.1 KEGG: mva:Mvan_0190 conserved hypothetical protein YP_001131745.1 KEGG: mva:Mvan_0189 transcriptional regulator, fis family YP_001131746.1 KEGG: mva:Mvan_0188 MmpL11 YP_001131747.1 KEGG: mva:Mvan_0187 conserved hypothetical protein YP_001131748.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase, family 28; KEGG: mkm:Mkms_1286 glycosyltransferase, MGT family YP_001131749.1 PFAM: MMPL domain protein; KEGG: mva:Mvan_1577 polyprenyl synthetase YP_001131750.1 KEGG: mav:MAV_4843 hypothetical protein YP_001131751.1 KEGG: mva:Mvan_0186 putative conserved transmembrane protein YP_001131752.1 KEGG: mva:Mvan_0185 conserved hypothetical protein YP_001131753.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bba:Bd0323 putative secreted protein YP_001131754.1 PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mva:Mvan_0184 neprilysin YP_001131755.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: mxa:MXAN_4998 hypothetical protein YP_001131756.1 KEGG: mkm:Mkms_0165 conserved hypothetical protein YP_001131757.1 PFAM: protein of unknown function DUF58; KEGG: mva:Mvan_0181 protein of unknown function DUF58 YP_001131758.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mva:Mvan_0180 ATPase associated with various cellular activities, AAA_3 YP_001131759.1 KEGG: mva:Mvan_0179 conserved hypothetical protein YP_001131760.1 KEGG: mva:Mvan_0178 conserved hypothetical protein YP_001131761.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mva:Mvan_0177 ErfK/YbiS/YcfS/YnhG family protein YP_001131762.1 PFAM: protein of unknown function DUF77; KEGG: mva:Mvan_0176 protein of unknown function DUF77 YP_001131763.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_4654 integrase, catalytic region YP_001131764.1 PFAM: glycosyl transferase, group 1; KEGG: rha:RHA1_ro00092 probable glycosyltransferase YP_001131765.1 PFAM: protein of unknown function DUF156; KEGG: msm:MSMEG_0230 hypothetical protein YP_001131766.1 PFAM: protein of unknown function DUF305; KEGG: mva:Mvan_0174 protein of unknown function DUF305 YP_001131767.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001131768.1 KEGG: mva:Mvan_0171 conserved hypothetical protein YP_001131769.1 KEGG: mul:MUL_1503 hypothetical protein YP_001131770.1 KEGG: mva:Mvan_0168 conserved hypothetical protein YP_001131771.1 KEGG: mva:Mvan_0166 conserved hypothetical protein YP_001131772.1 KEGG: mva:Mvan_5903 conserved hypothetical protein YP_001131773.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3548c hypothetical protein YP_001131774.1 PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; KEGG: mva:Mvan_1818 pyruvate, water dikinase YP_001131775.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: fal:FRAAL3018 conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain YP_001131776.1 PFAM: beta-lactamase; KEGG: msm:MSMEG_6805 beta-lactamase YP_001131777.1 KEGG: mva:Mvan_5897 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; SMART: DNA topoisomerase II YP_001131778.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: mva:Mvan_5898 DNA gyrase/topoisomerase IV, subunit A YP_001131779.1 PFAM: protein of unknown function DUF861, cupin_3; KEGG: mva:Mvan_5899 protein of unknown function DUF861, cupin_3 YP_001131780.1 KEGG: mva:Mvan_5904 hypothetical protein YP_001131781.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mva:Mvan_5905 thioredoxin YP_001131782.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mva:Mvan_5910 GntR domain protein YP_001131783.1 KEGG: mva:Mvan_5911 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_001131784.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: mva:Mvan_5912 gluconate transporter YP_001131785.1 KEGG: mva:Mvan_5923 twin-arginine translocation pathway signal YP_001131786.1 KEGG: mva:Mvan_5924 conserved hypothetical protein YP_001131787.1 TIGRFAM: putative outer membrane adhesin like protein; KEGG: pub:SAR11_0932 hypothetical protein YP_001131788.1 KEGG: sme:SMb20158 hypothetical ABC transporter periplasmic solute-binding protein YP_001131789.1 KEGG: mkm:Mkms_5175 conserved hypothetical protein YP_001131790.1 PFAM: cyclase/dehydrase; KEGG: mkm:Mkms_4586 cyclase/dehydrase YP_001131791.1 KEGG: mva:Mvan_0158 conserved hypothetical protein YP_001131792.1 KEGG: mva:Mvan_0157 conserved hypothetical protein YP_001131793.1 KEGG: mva:Mvan_0156 FAD linked oxidase domain protein YP_001131794.1 PFAM: transposase, IS4 family protein; KEGG: cef:CE2553 insertion element conserved hypothetical protein YP_001131795.1 PFAM: O-methyltransferase, family 3; KEGG: mva:Mvan_0154 O-methyltransferase, family 3 YP_001131796.1 KEGG: mva:Mvan_0153 conserved hypothetical protein YP_001131797.1 KEGG: mva:Mvan_0152 conserved hypothetical protein YP_001131798.1 KEGG: mva:Mvan_0151 putative secreted protein YP_001131799.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_0150 alpha/beta hydrolase fold YP_001131800.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_001131801.1 PFAM: regulatory protein, MarR; regulatory protein, ArsR; KEGG: mva:Mvan_0148 transcriptional regulator, MarR family YP_001131802.1 KEGG: mva:Mvan_0569 protein of unknown function DUF732 YP_001131803.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mkm:Mkms_1750 cupin 2, conserved barrel domain protein YP_001131804.1 KEGG: mkm:Mkms_1749 conserved hypothetical protein YP_001131805.1 KEGG: mkm:Mkms_1748 NAD-dependent aldehyde dehydrogenases-like protein YP_001131806.1 KEGG: mkm:Mkms_1747 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001131807.1 KEGG: mkm:Mkms_1746 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001131808.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: mkm:Mkms_1745 4-carboxymuconolactone decarboxylase YP_001131809.1 PFAM: fumarate lyase; KEGG: mkm:Mkms_1744 fumarate lyase YP_001131810.1 TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mva:Mvan_0561 protocatechuate 3,4-dioxygenase, alpha subunit YP_001131811.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mmc:Mmcs_1698 protocatechuate 3,4-dioxygenase, beta subunit YP_001131812.1 PFAM: regulatory proteins, IclR; KEGG: mkm:Mkms_1741 regulatory proteins, IclR YP_001131813.1 PFAM: dihydrodipicolinate synthetase; KEGG: mva:Mvan_0558 dihydrodipicolinate synthetase YP_001131814.1 PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: mkm:Mkms_1739 ketopantoate reductase ApbA/PanE, N-terminal domain protein YP_001131815.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mkm:Mkms_1738 helix-turn-helix-domain containing protein, AraC type YP_001131816.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0547 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131817.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_1716 ring hydroxylating dioxygenase, alpha subunit YP_001131818.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_0545 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131819.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_001131820.1 PFAM: class II aldolase/adducin family protein; KEGG: mva:Mvan_0543 class II aldolase/adducin family protein YP_001131821.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mmc:Mmcs_1683 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001131822.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; KEGG: mva:Mvan_0541 oxidoreductase domain protein YP_001131823.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0540 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131824.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_0539 Rieske (2Fe-2S) domain protein YP_001131825.1 PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_5609 alpha/beta hydrolase fold YP_001131826.1 PFAM: regulatory protein, MarR; KEGG: mkm:Mkms_5651 transcriptional regulator, MarR family YP_001131827.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mva:Mvan_0536 6-phosphogluconate dehydrogenase, NAD-binding YP_001131828.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mkm:Mkms_5649 cupin 2, conserved barrel domain protein YP_001131829.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0534 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131830.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_5647 ring hydroxylating dioxygenase, alpha subunit YP_001131831.1 KEGG: mva:Mvan_0532 conserved hypothetical protein YP_001131832.1 KEGG: mva:Mvan_0531 conserved hypothetical protein YP_001131833.1 PFAM: protein of unknown function DUF35; KEGG: mva:Mvan_0530 protein of unknown function DUF35 YP_001131834.1 KEGG: mkm:Mkms_5643 putative nonspecific lipid-transfer protein YP_001131835.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mva:Mvan_0528 L-carnitine dehydratase/bile acid-inducible protein F YP_001131836.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_1692 alcohol dehydrogenase, zinc-binding domain protein YP_001131837.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0526 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131838.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_1690 ring hydroxylating dioxygenase, alpha subunit YP_001131839.1 PFAM: Integrase, catalytic region; KEGG: mkm:Mkms_3253 integrase, catalytic region YP_001131840.1 PFAM: transposase IS3/IS911 family protein; KEGG: mkm:Mkms_3252 transposase IS3/IS911 family protein YP_001131841.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mva:Mvan_0521 epoxide hydrolase domain protein YP_001131842.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0493 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131843.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_0492 Rieske (2Fe-2S) domain protein YP_001131844.1 KEGG: mkm:Mkms_1671 conserved hypothetical protein YP_001131845.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_1670 alcohol dehydrogenase, zinc-binding domain protein YP_001131846.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_0489 short-chain dehydrogenase/reductase SDR YP_001131847.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_5626 ring hydroxylating dioxygenase, alpha subunit YP_001131848.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mkm:Mkms_5625 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131849.1 PFAM: aldehyde dehydrogenase; KEGG: mkm:Mkms_1663 aldehyde dehydrogenase (NAD(+)) YP_001131850.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mva:Mvan_0485 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001131851.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mva:Mvan_0484 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001131852.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1634 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131853.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001131854.1 PFAM: transposase IS3/IS911 family protein; KEGG: gvi:glr3858 putative transposase YP_001131855.1 PFAM: Integrase, catalytic region; KEGG: mkm:Mkms_3253 integrase, catalytic region YP_001131856.1 PFAM: transposase IS3/IS911 family protein; KEGG: mkm:Mkms_3252 transposase IS3/IS911 family protein YP_001131857.1 KEGG: mva:Mvan_0482 integrase, catalytic region YP_001131858.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: aau:AAur_pTC10051 IS21 family element, transposase IstB YP_001131859.1 PFAM: phage integrase family protein; KEGG: mva:Mvan_5941 phage integrase family protein YP_001131860.1 KEGG: mva:Mvan_5942 conserved hypothetical protein YP_001131861.1 PFAM: phage integrase family protein; KEGG: mva:Mvan_5943 phage integrase family protein YP_001131862.1 KEGG: aau:AAur_pTC10051 IS21 family element, transposase IstB YP_001131863.1 PFAM: dihydrodipicolinate synthetase; KEGG: mva:Mvan_0472 dihydrodipicolinate synthetase YP_001131864.1 KEGG: mkm:Mkms_1657 conserved hypothetical protein YP_001131865.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mkm:Mkms_1656 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131866.1 PFAM: dihydrodipicolinate synthetase; KEGG: mva:Mvan_0469 dihydrodipicolinate synthetase YP_001131867.1 PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_0468 cupin 2, conserved barrel domain protein YP_001131868.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mva:Mvan_0467 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001131869.1 KEGG: art:Arth_4366 hypothetical protein YP_001131870.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_001131871.1 KEGG: mva:Mvan_0465 hypothetical protein YP_001131872.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mkm:Mkms_1648 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131873.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_1647 ring hydroxylating dioxygenase, alpha subunit YP_001131874.1 PFAM: regulatory proteins, IclR; KEGG: mkm:Mkms_1646 regulatory proteins, IclR YP_001131875.1 KEGG: mkm:Mkms_2638 integrase, catalytic region YP_001131876.1 PFAM: transposase, IS4 family protein; KEGG: msm:MSMEG_6146 ISMsm3, transposase YP_001131877.1 KEGG: mkm:Mkms_2638 integrase, catalytic region YP_001131878.1 PFAM: transposase IS3/IS911 family protein; KEGG: mkm:Mkms_2637 transcriptional regulator, fis family YP_001131879.1 PFAM: transposase IS3/IS911 family protein; KEGG: msm:MSMEG_1867 transposase YP_001131880.1 PFAM: Integrase, catalytic region; KEGG: msm:MSMEG_1866 transposase B YP_001131881.1 KEGG: msm:MSMEG_6888 transposase subunit YP_001131882.1 PFAM: regulatory protein, ArsR; KEGG: mva:Mvan_3640 regulatory protein, ArsR YP_001131883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5743 heavy metal translocating P-type ATPase YP_001131884.1 KEGG: mva:Mvan_3642 cadmium resistance transporter YP_001131885.1 PFAM: Integrase, catalytic region; KEGG: mkm:Mkms_3253 integrase, catalytic region YP_001131886.1 PFAM: transposase IS3/IS911 family protein; KEGG: mkm:Mkms_3252 transposase IS3/IS911 family protein YP_001131887.1 KEGG: mva:Mvan_3642 cadmium resistance transporter YP_001131888.1 KEGG: msm:MSMEG_3322 hypothetical protein YP_001131889.1 KEGG: msm:MSMEG_3321 ATP/GTP-binding protein YP_001131890.1 PFAM: Integrase, catalytic region; KEGG: rha:RHA1_ro07276 possible transposase YP_001131891.1 KEGG: sco:SCO7843 hypothetical protein YP_001131892.1 KEGG: msm:MSMEG_6888 transposase subunit YP_001131893.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5960 transposase IS3/IS911 family protein YP_001131895.1 KEGG: mkm:Mkms_1715 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131896.1 PFAM: transposase IS3/IS911 family protein; KEGG: gvi:glr3858 putative transposase YP_001131897.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001131898.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_001131899.1 PFAM: class II aldolase/adducin family protein; KEGG: mva:Mvan_0543 class II aldolase/adducin family protein YP_001131900.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: mmc:Mmcs_1683 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001131901.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; KEGG: mva:Mvan_0541 oxidoreductase domain protein YP_001131902.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0540 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131903.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_5838 Rieske (2Fe-2S) domain protein YP_001131904.1 PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_5609 alpha/beta hydrolase fold YP_001131905.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_0537 transcriptional regulator, MarR family YP_001131906.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mva:Mvan_0536 6-phosphogluconate dehydrogenase, NAD-binding YP_001131907.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mkm:Mkms_5649 cupin 2, conserved barrel domain protein YP_001131908.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0534 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131909.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_5647 ring hydroxylating dioxygenase, alpha subunit YP_001131910.1 KEGG: mva:Mvan_0532 conserved hypothetical protein YP_001131911.1 KEGG: mva:Mvan_0531 conserved hypothetical protein YP_001131912.1 PFAM: protein of unknown function DUF35; KEGG: mva:Mvan_0530 protein of unknown function DUF35 YP_001131913.1 KEGG: mkm:Mkms_5643 putative nonspecific lipid-transfer protein YP_001131914.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mva:Mvan_0528 L-carnitine dehydratase/bile acid-inducible protein F YP_001131915.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_1692 alcohol dehydrogenase, zinc-binding domain protein YP_001131916.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0526 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131917.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_1690 ring hydroxylating dioxygenase, alpha subunit YP_001131918.1 PFAM: regulatory protein, MarR; KEGG: mkm:Mkms_1689 transcriptional regulator, MarR family YP_001131919.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_0523 drug resistance transporter, EmrB/QacA subfamily YP_001131920.1 PFAM: aldehyde dehydrogenase; KEGG: mkm:Mkms_5636 aldehyde dehydrogenase YP_001131921.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mva:Mvan_0521 epoxide hydrolase domain protein YP_001131922.1 KEGG: mva:Mvan_0520 conserved hypothetical protein YP_001131923.1 KEGG: mkm:Mkms_1684 conserved hypothetical protein YP_001131924.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0518 virulence factor Mce family protein YP_001131925.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0517 virulence factor Mce family protein YP_001131926.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0516 virulence factor Mce family protein YP_001131927.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0515 virulence factor Mce family protein YP_001131928.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mkm:Mkms_1679 virulence factor Mce family protein YP_001131929.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0500 virulence factor Mce family protein YP_001131930.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0499 protein of unknown function DUF140 YP_001131931.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0498 protein of unknown function DUF140 YP_001131932.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: mkm:Mkms_1675 intradiol ring-cleavage dioxygenase YP_001131933.1 PFAM: Sterol-binding domain protein; KEGG: mkm:Mkms_1674 sterol-binding domain protein YP_001131934.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0493 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131935.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_0492 Rieske (2Fe-2S) domain protein YP_001131936.1 KEGG: mkm:Mkms_1671 conserved hypothetical protein YP_001131937.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_1670 alcohol dehydrogenase, zinc-binding domain protein YP_001131938.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_0489 short-chain dehydrogenase/reductase SDR YP_001131939.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_0488 ring hydroxylating dioxygenase, alpha subunit YP_001131940.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0487 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131941.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_1639 integrase, catalytic region YP_001131942.1 KEGG: mmc:Mmcs_1638 hypothetical protein YP_001131943.1 PFAM: aldehyde dehydrogenase; KEGG: mkm:Mkms_1663 aldehyde dehydrogenase (NAD(+)) YP_001131944.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mva:Mvan_0485 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001131945.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mva:Mvan_0484 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001131946.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1634 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131947.1 KEGG: mmc:Mmcs_1638 hypothetical protein YP_001131948.1 PFAM: dihydrodipicolinate synthetase; KEGG: mva:Mvan_0472 dihydrodipicolinate synthetase YP_001131949.1 KEGG: mkm:Mkms_1657 conserved hypothetical protein YP_001131950.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mkm:Mkms_1656 glyoxalase/bleomycin resistance protein/dioxygenase YP_001131951.1 PFAM: dihydrodipicolinate synthetase; KEGG: mva:Mvan_0469 dihydrodipicolinate synthetase YP_001131952.1 PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_0468 cupin 2, conserved barrel domain protein YP_001131953.1 PFAM: transposase, mutator type; KEGG: mkm:Mkms_5755 transposase, mutator type YP_001131954.1 KEGG: mva:Mvan_0468 cupin 2, conserved barrel domain protein YP_001131955.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mva:Mvan_0467 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001131956.1 KEGG: art:Arth_4366 hypothetical protein YP_001131957.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_001131958.1 KEGG: mva:Mvan_0465 hypothetical protein YP_001131959.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mva:Mvan_0464 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001131960.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_1647 ring hydroxylating dioxygenase, alpha subunit YP_001131961.1 PFAM: regulatory proteins, IclR; KEGG: mkm:Mkms_1646 regulatory proteins, IclR YP_001131962.1 KEGG: mva:Mvan_0461 conserved hypothetical protein YP_001131963.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11272 transposase YP_001131964.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sma:SAV303 IS110 family transposase YP_001131965.1 KEGG: msm:MSMEG_2151 transposase IstA protein, putative YP_001131966.1 KEGG: msm:MSMEG_2151 transposase IstA protein, putative YP_001131967.1 KEGG: msm:MSMEG_2150 putative transposition helper protein YP_001131968.1 KEGG: mva:Mvan_5933 Tn554-related, transposase C YP_001131969.1 PFAM: Pirin domain protein; KEGG: mva:Mvan_0147 pirin domain protein YP_001131970.1 KEGG: mva:Mvan_0146 SMP-30/gluconolaconase/LRE-like region YP_001131971.1 KEGG: mva:Mvan_0144 conserved hypothetical protein YP_001131972.1 KEGG: mul:MUL_0999 hypothetical protein YP_001131973.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11272 transposase YP_001131974.1 KEGG: msm:MSMEG_0145 hypothetical protein YP_001131975.1 KEGG: mva:Mvan_0143 conserved hypothetical protein YP_001131976.1 KEGG: mva:Mvan_0142 conserved hypothetical protein YP_001131977.1 PFAM: RDD domain containing protein; KEGG: mva:Mvan_0141 RDD domain containing protein YP_001131978.1 KEGG: mva:Mvan_0140 putative conserved MCE associated membrane protein YP_001131979.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0139 virulence factor Mce family protein YP_001131980.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0138 virulence factor Mce family protein YP_001131981.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0137 virulence factor Mce family protein YP_001131982.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0136 virulence factor Mce family protein YP_001131983.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0135 virulence factor Mce family protein YP_001131984.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_0134 virulence factor Mce family protein YP_001131985.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0133 protein of unknown function DUF140 YP_001131986.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_0132 protein of unknown function DUF140 YP_001131987.1 activates fatty acids by binding to coenzyme A YP_001131988.1 PFAM: regulatory protein GntR, HTH; KEGG: mva:Mvan_0130 transcriptional regulator, GntR family YP_001131989.1 PFAM: cyclase/dehydrase; KEGG: mva:Mvan_0129 cyclase/dehydrase YP_001131990.1 PFAM: protein of unknown function DUF72; KEGG: mva:Mvan_0127 protein of unknown function DUF72 YP_001131991.1 PFAM: peptidase M42 family protein; KEGG: msm:MSMEG_3273 glutamyl aminopeptidase, M42 family protein YP_001131992.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0126 transcriptional regulator, TetR family YP_001131993.1 KEGG: mav:MAV_1886 hypothetical protein YP_001131994.1 KEGG: mva:Mvan_0124 hypothetical protein YP_001131995.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_0123 ABC transporter-related protein YP_001131996.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; KEGG: mva:Mvan_0122 substrate-binding region of ABC-type glycine betaine transport system YP_001131997.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_0121 binding-protein-dependent transport systems inner membrane component YP_001131998.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa25980 putative alcohol dehydrogenase YP_001131999.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm YP_001132000.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: mva:Mvan_0119 NAD(P) transhydrogenase, beta subunit YP_001132001.1 PFAM: transposase, IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein YP_001132002.1 PFAM: ATP-binding region, ATPase domain protein; KEGG: msm:MSMEG_0106 sensory histidine kinase YP_001132003.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: msm:MSMEG_0105 DNA-binding response regulator, LuxR family protein YP_001132004.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mva:Mvan_0118 helix-turn-helix-domain containing protein, AraC type YP_001132005.1 PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: mva:Mvan_0117 FAD dependent oxidoreductase YP_001132006.1 KEGG: mkm:Mkms_4942 conserved hypothetical protein YP_001132007.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_0116 acyl-CoA dehydrogenase domain protein YP_001132008.1 KEGG: mva:Mvan_0115 protein tyrosine/serine phosphatase YP_001132009.1 PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_0093 alpha/beta hydrolase fold YP_001132010.1 KEGG: mva:Mvan_0112 conserved hypothetical protein YP_001132011.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_0109 methyltransferase type 11 YP_001132012.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_0108 haloacid dehalogenase, type II YP_001132013.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_0107 alcohol dehydrogenase, zinc-binding domain protein YP_001132014.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0106 short-chain dehydrogenase/reductase SDR YP_001132015.1 PFAM: aldehyde dehydrogenase; KEGG: mva:Mvan_0105 aldehyde dehydrogenase YP_001132016.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mva:Mvan_0104 putative methyltransferase YP_001132017.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_0096 transcriptional regulator, TetR family YP_001132018.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0102 transcriptional regulator, TetR family YP_001132019.1 KEGG: mva:Mvan_0100 membrane protein-like protein YP_001132020.1 PFAM: Pirin domain protein; Pirin domain protein; KEGG: mva:Mvan_0099 pirin domain protein YP_001132021.1 KEGG: mva:Mvan_0098 hypothetical protein YP_001132022.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: mva:Mvan_0097 phosphoenolpyruvate-protein phosphotransferase YP_001132023.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: mva:Mvan_0096 transcriptional regulator, DeoR family YP_001132024.1 PFAM: PfkB domain protein; KEGG: mva:Mvan_0095 PfkB domain protein YP_001132025.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mva:Mvan_0094 PTS system, fructose subfamily, IIC subunit YP_001132026.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mva:Mvan_0093 phosphotransferase system, phosphocarrier protein HPr YP_001132027.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001132028.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mva:Mvan_0092 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001132029.1 KEGG: mva:Mvan_0091 putative conserved membrane protein YP_001132030.1 KEGG: mva:Mvan_0090 conserved hypothetical protein YP_001132031.1 KEGG: mva:Mvan_0089 conserved hypothetical protein YP_001132032.1 KEGG: mva:Mvan_0086 conserved hypothetical protein YP_001132033.1 KEGG: mva:Mvan_0085 conserved hypothetical alanine and proline rich protein YP_001132034.1 KEGG: mva:Mvan_0084 conserved hypothetical protein YP_001132035.1 KEGG: mva:Mvan_0083 conserved hypothetical protein YP_001132036.1 KEGG: mva:Mvan_0082 conserved hypothetical protein YP_001132037.1 PFAM: protein of unknown function DUF571; KEGG: mva:Mvan_0081 protein of unknown function DUF571 YP_001132038.1 KEGG: mva:Mvan_0080 conserved hypothetical proline and alanine rich protein YP_001132039.1 KEGG: msm:MSMEG_0066 early secretory antigenic target, 6 kDa YP_001132040.1 KEGG: msm:MSMEG_0065 hypothetical protein YP_001132041.1 PFAM: PPE protein; KEGG: mva:Mvan_0077 PPE protein YP_001132042.1 KEGG: mva:Mvan_0076 PE-like protein YP_001132043.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mva:Mvan_0075 cell divisionFtsK/SpoIIIE YP_001132044.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mva:Mvan_0074 cell divisionFtsK/SpoIIIE YP_001132045.1 PFAM: protein of unknown function DUF690; KEGG: mva:Mvan_0073 protein of unknown function DUF690 YP_001132046.1 PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mva:Mvan_0072 AAA ATPase, central domain protein YP_001132047.1 KEGG: mva:Mvan_0071 conserved hypothetical protein YP_001132048.1 KEGG: mva:Mvan_0070 conserved hypothetical protein YP_001132049.1 KEGG: mva:Mvan_0069 conserved hypothetical protein YP_001132050.1 KEGG: mva:Mvan_0068 conserved hypothetical alanine rich protein YP_001132051.1 KEGG: mva:Mvan_0067 transcription factor WhiB YP_001132052.1 KEGG: mva:Mvan_0066 propionyl-CoA carboxylase YP_001132053.1 KEGG: mva:Mvan_6043 conserved hypothetical protein YP_001132054.1 PFAM: carboxyl transferase; KEGG: mva:Mvan_0066 propionyl-CoA carboxylase YP_001132055.1 KEGG: mva:Mvan_0065 conserved hypothetical protein YP_001132056.1 PFAM: helix-turn-helix domain protein; KEGG: msm:MSMEG_5052 DNA-binding protein YP_001132057.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mkm:Mkms_3125 methionine aminopeptidase, type I YP_001132058.1 PFAM: protein of unknown function DUF55; KEGG: mva:Mvan_0064 protein of unknown function DUF55 YP_001132059.1 KEGG: mbb:BCG_0970 hypothetical protein YP_001132060.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mbb:BCG_0971 hypothetical protein YP_001132061.1 PFAM: Pirin domain protein; Pirin domain protein; KEGG: mva:Mvan_0062 pirin domain protein YP_001132062.1 KEGG: mva:Mvan_0061 conserved hypothetical protein YP_001132063.1 KEGG: mva:Mvan_0060 conserved hypothetical protein YP_001132064.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_0059 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132065.1 KEGG: mva:Mvan_0058 conserved hypothetical protein YP_001132066.1 PFAM: ChaB family protein; KEGG: mkm:Mkms_3725 ChaB family protein YP_001132067.1 KEGG: mav:MAV_0133 hypothetical protein YP_001132068.1 PFAM: polysaccharide deacetylase; KEGG: mva:Mvan_0047 polysaccharide deacetylase YP_001132069.1 TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mva:Mvan_0046 putative agmatinase YP_001132070.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0045 short-chain dehydrogenase/reductase SDR YP_001132071.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_0044 short-chain dehydrogenase/reductase SDR YP_001132072.1 PFAM: amino acid permease-associated region; KEGG: mva:Mvan_0043 amino acid permease-associated region YP_001132073.1 PFAM: purine catabolism PurC domain protein; KEGG: mva:Mvan_0042 purine catabolism PurC domain protein YP_001132074.1 KEGG: rha:RHA1_ro06017 hypothetical protein YP_001132075.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_1062 type III restriction enzyme, res subunit YP_001132076.1 PFAM: restriction modification system DNA specificity domain; KEGG: abo:ABO_1829 type I restriction-modification system, S subunit YP_001132077.1 PFAM: N-6 DNA methylase; KEGG: rfr:Rfer_1059 N-6 DNA methylase YP_001132078.1 PFAM: Forkhead-associated protein; KEGG: mva:Mvan_0029 FHA domain containing protein YP_001132079.1 PFAM: Forkhead-associated protein; KEGG: mva:Mvan_0028 FHA domain containing protein YP_001132080.1 PFAM: protein phosphatase 2C domain protein; KEGG: mva:Mvan_0027 protein phosphatase 2C domain protein YP_001132081.1 PFAM: cell cycle protein; KEGG: mva:Mvan_0026 cell cycle protein YP_001132082.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: mva:Mvan_0025 penicillin-binding protein, transpeptidase YP_001132083.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mva:Mvan_0024 protein kinase YP_001132084.1 PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mva:Mvan_0023 protein kinase YP_001132085.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity YP_001132086.1 PFAM: protein of unknown function DUF881; KEGG: mva:Mvan_0020 protein of unknown function DUF881 YP_001132087.1 integral membrane protein involved in inhibition of the Z-ring formation YP_001132088.1 KEGG: mva:Mvan_0018 conserved hypothetical protein YP_001132089.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mva:Mvan_0017 peptidylprolyl isomerase YP_001132090.1 KEGG: mva:Mvan_0016 putative membrane protein YP_001132091.1 KEGG: sma:SAV2776 putative L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001132092.1 KEGG: mva:Mvan_0008 conserved hypothetical protein YP_001132093.1 KEGG: mva:Mvan_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain protein YP_001132094.1 negatively supercoils closed circular double-stranded DNA YP_001132095.1 PFAM: protein of unknown function DUF721; KEGG: mva:Mvan_0005 protein of unknown function DUF721 YP_001132096.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_001132097.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_001132098.1 binds the polymerase to DNA and acts as a sliding clamp YP_001132099.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001132100.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_001132101.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_001132102.1 PFAM: protein of unknown function DUF37; KEGG: mva:Mvan_6076 protein of unknown function DUF37 YP_001132103.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria YP_001132104.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: mva:Mvan_6074 single-stranded nucleic acid binding R3H domain protein YP_001132105.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_001132106.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mva:Mvan_6072 cobyrinic acid a,c-diamide synthase YP_001132107.1 TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: mva:Mvan_6071 ParB-like partition proteins YP_001132108.1 KEGG: mva:Mvan_6070 conserved hypothetical protein YP_001132109.1 PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase/autolysin; KEGG: mva:Mvan_6069 peptidoglycan-binding domain 1 protein YP_001132110.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mva:Mvan_6068 thioredoxin YP_001132111.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: mva:Mvan_6067 thioredoxin reductase YP_001132112.1 KEGG: mva:Mvan_6066 conserved hypothetical protein YP_001132113.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mva:Mvan_6065 transcriptional regulator, fis family YP_001132114.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mva:Mvan_6064 integral membrane protein MviN YP_001132115.1 KEGG: mva:Mvan_6063 conserved hypothetical protein YP_001132116.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_6062 NUDIX hydrolase YP_001132117.1 KEGG: mva:Mvan_6061 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; HDIG domain protein; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region YP_001132118.1 KEGG: mva:Mvan_6060 conserved hypothetical protein YP_001132119.1 KEGG: mva:Mvan_1718 putative outer membrane adhesin like protein YP_001132120.1 PFAM: Wyosine base formation; KEGG: mva:Mvan_6059 conserved hypothetical protein YP_001132121.1 PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_6058 major facilitator superfamily MFS_1 YP_001132122.1 PFAM: protein of unknown function DUF179; KEGG: mva:Mvan_6057 protein of unknown function DUF179 YP_001132123.1 KEGG: mva:Mvan_6056 conserved hypothetical protein YP_001132124.1 KEGG: mva:Mvan_6055 conserved hypothetical protein YP_001132125.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_001132126.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_6051 short-chain dehydrogenase/reductase SDR YP_001132127.1 KEGG: mva:Mvan_6050 conserved hypothetical protein YP_001132128.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_6049 transcriptional regulator, MarR family YP_001132129.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_6048 ABC transporter-related protein YP_001132130.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; KEGG: mva:Mvan_6047 polar amino acid ABC transporter, inner membrane subunit YP_001132131.1 PFAM: regulatory protein GntR, HTH; KEGG: mva:Mvan_6046 regulatory protein GntR, HTH YP_001132132.1 KEGG: mva:Mvan_6045 conserved hypothetical protein YP_001132133.1 PFAM: protein of unknown function DUF839; KEGG: mva:Mvan_6044 protein of unknown function DUF839 YP_001132134.1 KEGG: mkm:Mkms_5467 conserved hypothetical protein YP_001132135.1 KEGG: mkm:Mkms_5467 conserved hypothetical protein YP_001132136.1 KEGG: mkm:Mkms_5467 conserved hypothetical protein YP_001132137.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_6042 alpha/beta hydrolase fold YP_001132138.1 KEGG: mva:Mvan_6041 conserved hypothetical protein YP_001132139.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: mva:Mvan_6040 myo-inositol-1-phosphate synthase YP_001132140.1 PFAM: transcriptional regulator PadR family protein; KEGG: mva:Mvan_6039 transcriptional regulator, PadR-like family YP_001132141.1 PFAM: protein of unknown function DUF1707; KEGG: mva:Mvan_6038 protein of unknown function DUF1707 YP_001132142.1 KEGG: mva:Mvan_6037 conserved hypothetical protein YP_001132143.1 PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: mva:Mvan_6036 glycosyl transferase, family 51 YP_001132144.1 KEGG: mva:Mvan_6035 conserved hypothetical protein YP_001132146.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001132147.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_001132148.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001132149.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001132150.1 PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: mva:Mvan_6030 DnaB domain protein helicase, C-terminal domain protein YP_001132151.1 PFAM: translation initiation factor IF-2 domain protein; KEGG: mul:MUL_2122 translation initiation factor IF-2 InfB YP_001132152.1 KEGG: mkm:Mkms_5593 hypothetical protein YP_001132153.1 KEGG: fra:Francci3_0494 hypothetical protein YP_001132154.1 KEGG: rha:RHA1_ro08747 possible transposase YP_001132155.1 KEGG: mkm:Mkms_5592 AAA ATPase YP_001132156.1 KEGG: fra:Francci3_0498 hypothetical protein YP_001132157.1 PFAM: helix-turn-helix domain protein; KEGG: mva:Mvan_3268 transcriptional regulator, XRE family YP_001132160.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_1453 NLP/P60 protein YP_001132161.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11272 transposase YP_001132162.1 KEGG: mkm:Mkms_5735 conserved hypothetical protein YP_001132163.1 PFAM: protein of unknown function DUF305; KEGG: mkm:Mkms_5736 protein of unknown function DUF305 YP_001132164.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mkm:Mkms_1456 integral membrane sensor signal transduction histidine kinase YP_001132165.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mkm:Mkms_1457 two component transcriptional regulator, winged helix family YP_001132167.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_5716 NLP/P60 protein YP_001132168.1 PFAM: Penicillinase repressor; KEGG: mkm:Mkms_5717 transcriptional repressor, CopY family YP_001132169.1 KEGG: mkm:Mkms_5718 conserved hypothetical protein YP_001132170.1 KEGG: mva:Mvan_5857 conserved hypothetical protein YP_001132171.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mkm:Mkms_1462 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001132172.1 PFAM: major facilitator superfamily MFS_1; KEGG: mkm:Mkms_1463 major facilitator superfamily MFS_1 YP_001132173.1 PFAM: transcriptional regulator domain protein; KEGG: mva:Mvan_3653 response regulator receiver protein YP_001132174.1 PFAM: NLP/P60 protein; KEGG: mva:Mvan_3652 NLP/P60 protein YP_001132176.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5721 ErfK/YbiS/YcfS/YnhG family protein YP_001132177.1 KEGG: mva:Mvan_3680 conserved hypothetical protein YP_001132178.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mva:Mvan_3681 heavy metal translocating P-type ATPase YP_001132179.1 PFAM: regulatory protein, ArsR; KEGG: mkm:Mkms_1492 regulatory protein, ArsR YP_001132180.1 PFAM: DSBA oxidoreductase; KEGG: mva:Mvan_3237 DsbA oxidoreductase YP_001132181.1 PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_1467 alpha/beta hydrolase fold YP_001132182.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mkm:Mkms_1468 heavy metal transport/detoxification protein YP_001132183.1 KEGG: mkm:Mkms_1469 conserved hypothetical protein YP_001132184.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_1470 heavy metal translocating P-type ATPase YP_001132185.1 PFAM: YHS domain protein; KEGG: mkm:Mkms_1471 YHS domain protein YP_001132186.1 PFAM: protein of unknown function DUF156; KEGG: mkm:Mkms_1472 protein of unknown function DUF156 YP_001132187.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5408 copper-translocating P-type ATPase YP_001132188.1 KEGG: mkm:Mkms_1487 conserved hypothetical protein YP_001132190.1 KEGG: mkm:Mkms_5902 conserved hypothetical protein YP_001132191.1 KEGG: fra:Francci3_2550 hypothetical protein YP_001132192.1 KEGG: mav:MAV_0270 acetyltransferase, GNAT family protein YP_001132193.1 KEGG: tfu:Tfu_2774 hypothetical protein YP_001132194.1 PFAM: protein of unknown function DUF1130; KEGG: jan:Jann_0586 hypothetical protein YP_001132196.1 KEGG: art:Arth_0592 proteinase inhibitor I4, serpin YP_001132197.1 PFAM: regulatory protein, TetR; KEGG: mav:MAV_4851 transcriptional regulator, TetR family protein YP_001132198.1 KEGG: mav:MAV_2461 hypothetical protein YP_001132199.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mav:MAV_0354 oxidoreductase, short chain dehydrogenase/reductase family protein YP_001132200.1 TIGRFAM: PIN domain family protein; PFAM: PilT protein domain protein; KEGG: mbb:BCG_2122c hypothetical protein YP_001132201.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: mbb:BCG_2123c hypothetical protein YP_001132202.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_3508 short-chain dehydrogenase/reductase SDR YP_001132203.1 KEGG: mkm:Mkms_4752 conserved hypothetical protein YP_001132204.1 PFAM: regulatory protein, MerR; KEGG: msm:MSMEG_3274 MerR-family protein transcriptional regulator YP_001132205.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rfr:Rfer_1050 hypothetical protein YP_001132206.1 KEGG: sru:SRU_1374 hypothetical protein YP_001132207.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: cdi:DIP0179 hypothetical protein YP_001132208.1 KEGG: nca:Noca_4482 hypothetical protein YP_001132209.1 KEGG: mav:MAV_1064 hypothetical protein YP_001132210.1 KEGG: mkm:Mkms_1514 conserved hypothetical protein YP_001132211.1 KEGG: mkm:Mkms_2677 conserved hypothetical protein YP_001132213.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV882 TetR-family transcriptional regulator YP_001132214.1 PFAM: aldo/keto reductase; KEGG: nfa:nfa3270 putative oxidoreductase YP_001132215.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5918 short-chain dehydrogenase/reductase SDR YP_001132216.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5917 transcriptional regulator, TetR family YP_001132217.1 KEGG: mva:Mvan_5773 protein of unknown function UPF0089 YP_001132218.1 PFAM: HNH endonuclease; protein of unknown function DUF222; KEGG: mav:MAV_0536 hypothetical protein YP_001132219.1 KEGG: mva:Mvan_0167 hypothetical protein YP_001132220.1 PFAM: Survival protein SurE; KEGG: msm:MSMEG_6820 acid phosphatase SurE YP_001132221.1 PFAM: PfkB domain protein; KEGG: deh:cbdb_A1296 carbohydrate kinase, PfkB family YP_001132222.1 TIGRFAM: lycopene cyclase family protein; PFAM: FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: mva:Mvan_5914 lycopene cyclase family protein YP_001132223.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_6806 excinuclease ABC, A subunit YP_001132224.1 PFAM: beta-lactamase; KEGG: mkm:Mkms_5425 putative conserved alanine rich lipoprotein LppW YP_001132225.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mva:Mvan_5839 general substrate transporter YP_001132226.1 PFAM: protein of unknown function DUF1212; KEGG: mva:Mvan_5838 protein of unknown function DUF1212 YP_001132227.1 PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_1818 D-amino-acid dehydrogenase YP_001132228.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: eba:ebA4146 cation transport ATPases YP_001132229.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rha:RHA1_ro00345 possible oxidoreductase, N-termminal YP_001132230.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rha:RHA1_ro00346 probable transcriptional regulator, GntR family YP_001132232.1 PFAM: regulatory protein, MarR; transcriptional regulator PadR family protein; KEGG: mkm:Mkms_1193 transcriptional regulator, TrmB YP_001132233.1 KEGG: mkm:Mkms_3912 conserved hypothetical protein YP_001132234.1 KEGG: msm:MSMEG_6440 monooxygenase, flavin-binding family protein YP_001132235.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0179c hypothetical protein YP_001132236.1 PFAM: protein of unknown function DUF309; KEGG: mva:Mvan_5850 protein of unknown function DUF309 YP_001132237.1 PFAM: Abortive infection protein; KEGG: mva:Mvan_5908 abortive infection protein YP_001132238.1 PFAM: transposase, IS4 family protein; KEGG: msm:MSMEG_6146 ISMsm3, transposase YP_001132239.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mva:Mvan_5907 integral membrane sensor signal transduction histidine kinase YP_001132240.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: mva:Mvan_5906 two component transcriptional regulator, LuxR family YP_001132241.1 KEGG: mkm:Mkms_5360 conserved hypothetical protein YP_001132242.1 KEGG: msm:MSMEG_6726 ABC transporter, permease protein YP_001132243.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_6725 ABC transporter, ATP-binding protein YP_001132244.1 PFAM: cobalt transport protein; KEGG: msm:MSMEG_6724 ABC-type cobalt transport system YP_001132245.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_0633 transcriptional regulator, TetR family YP_001132246.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_0630 short-chain dehydrogenase/reductase SDR YP_001132247.1 KEGG: msm:MSMEG_6676 probable conserved transmembrane protein YP_001132248.1 KEGG: mva:Mvan_5861 conserved hypothetical protein YP_001132249.1 PFAM: protein of unknown function DUF202; KEGG: mkm:Mkms_5406 protein of unknown function DUF202 YP_001132250.1 KEGG: mva:Mvan_5845 protein of unknown function DUF202 YP_001132251.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11243 hypothetical protein YP_001132252.1 PFAM: protein of unknown function DUF302; KEGG: mva:Mvan_1826 protein of unknown function DUF302 YP_001132253.1 PFAM: protein of unknown function DUF156; KEGG: mva:Mvan_1827 protein of unknown function DUF156 YP_001132254.1 PFAM: protein of unknown function DUF81; KEGG: mkm:Mkms_5403 protein of unknown function DUF81 YP_001132255.1 PFAM: Rhodanese domain protein; KEGG: mkm:Mkms_5402 rhodanese domain protein YP_001132256.1 PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: mkm:Mkms_5401 beta-lactamase domain protein YP_001132257.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mkm:Mkms_5400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001132258.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mkm:Mkms_5399 thioredoxin YP_001132259.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mkm:Mkms_5422 ferredoxin-dependent glutamate synthase YP_001132260.1 KEGG: mkm:Mkms_4180 conserved hypothetical protein YP_001132261.1 PFAM: Haem oxygenase; KEGG: lxx:Lxx24860 heme oxygenase YP_001132262.1 PFAM: protein of unknown function UPF0126; KEGG: mkm:Mkms_0781 protein of unknown function UPF0126 YP_001132263.1 KEGG: mva:Mvan_5830 conserved hypothetical protein YP_001132264.1 KEGG: mkm:Mkms_0435 conserved hypothetical protein YP_001132265.1 PFAM: MaoC domain protein dehydratase; KEGG: mva:Mvan_5844 MaoC domain protein dehydratase YP_001132266.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_5841 ABC transporter-related protein YP_001132267.1 KEGG: sco:SCO2649 putative 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77 YP_001132268.1 KEGG: mva:Mvan_5840 hypothetical protein YP_001132269.1 KEGG: mkm:Mkms_5414 conserved hypothetical protein YP_001132270.1 KEGG: aeh:Mlg_1930 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001132271.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: ana:alr1121 two-component hybrid sensor and regulator YP_001132272.1 PFAM: MCP methyltransferase, CheR-type; KEGG: eba:ebA790 methylase of chemotaxis methyl-accepting protein YP_001132273.1 PFAM: CheB methylesterase; KEGG: aav:Aave_3994 CheB methylesterase YP_001132274.1 PFAM: glycoside hydrolase, family 6; KEGG: mva:Mvan_5837 cellulase YP_001132275.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mav:MAV_3989 phospholipase D family protein YP_001132276.1 PFAM: cyclase family protein; KEGG: rha:RHA1_ro03385 possible cyclase YP_001132277.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mkm:Mkms_5241 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132278.1 PFAM: amidohydrolase 2; KEGG: msm:MSMEG_0628 amidohydrolase family protein YP_001132279.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mva:Mvan_5829 transcriptional regulator, AraC family YP_001132280.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mva:Mvan_5828 transcriptional regulator, AraC family YP_001132281.1 KEGG: mva:Mvan_5826 nitrile hydratase YP_001132282.1 TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: msm:MSMEG_0378 nitrile hydratase, alpha subunit YP_001132283.1 KEGG: mva:Mvan_5824 hypothetical protein YP_001132284.1 KEGG: mva:Mvan_5823 conserved hypothetical protein YP_001132285.1 KEGG: mva:Mvan_5820 conserved hypothetical protein YP_001132286.1 KEGG: mkm:Mkms_3719 formate/nitrite family of transporters-like protein YP_001132287.1 PFAM: Amidase; KEGG: mkm:Mkms_5382 amidase YP_001132288.1 PFAM: luciferase family protein; KEGG: mva:Mvan_5819 luciferase family protein YP_001132289.1 KEGG: sde:Sde_0641 hypothetical protein YP_001132290.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mva:Mvan_5818 DEAD/DEAH box helicase domain protein YP_001132291.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mva:Mvan_5817 phospholipid/glycerol acyltransferase YP_001132292.1 PFAM: cyclase/dehydrase; KEGG: mva:Mvan_5816 cyclase/dehydrase YP_001132293.1 PFAM: acyl-CoA thioesterase; KEGG: mva:Mvan_5814 acyl-CoA thioesterase YP_001132294.1 PFAM: metallophosphoesterase; KEGG: mva:Mvan_5813 metallophosphoesterase YP_001132295.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_5812 short-chain dehydrogenase/reductase SDR YP_001132296.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: mva:Mvan_5811 iron-containing alcohol dehydrogenase YP_001132297.1 PFAM: thioesterase superfamily protein; KEGG: mva:Mvan_5810 thioesterase superfamily protein YP_001132298.1 KEGG: mkm:Mkms_2735 conserved hypothetical protein YP_001132299.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mva:Mvan_5808 NAD-dependent epimerase/dehydratase YP_001132300.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_5807 anti-sigma-factor antagonist YP_001132301.1 PFAM: cobalamin B12-binding domain protein; KEGG: mva:Mvan_5806 cobalamin B12-binding domain protein YP_001132302.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mva:Mvan_5805 putative GAF sensor protein YP_001132303.1 KEGG: mva:Mvan_5801 conserved hypothetical protein YP_001132304.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: mva:Mvan_5800 major facilitator superfamily MFS_1 YP_001132305.1 PFAM: regulatory protein, MarR; KEGG: mkm:Mkms_0921 transcriptional regulator, MarR family YP_001132306.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mva:Mvan_5796 intracellular protease, PfpI family YP_001132307.1 KEGG: mva:Mvan_5795 hypothetical protein YP_001132308.1 PFAM: cutinase; KEGG: mva:Mvan_5793 cutinase YP_001132309.1 KEGG: mva:Mvan_5792 conserved hypothetical protein YP_001132310.1 TIGRFAM: putative methylase; PFAM: putative RNA methylase; methyltransferase small; KEGG: mva:Mvan_5791 putative methylase YP_001132311.1 SMART: zinc finger, CDGSH-type domain protein; KEGG: mva:Mvan_5790 zinc finger, CDGSH-type domain protein YP_001132312.1 KEGG: mva:Mvan_5789 conserved hypothetical protein YP_001132313.1 KEGG: mva:Mvan_5788 conserved hypothetical protein YP_001132314.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_5787 NUDIX hydrolase YP_001132315.1 KEGG: mva:Mvan_5786 conserved hypothetical protein YP_001132316.1 KEGG: mva:Mvan_5785 conserved hypothetical protein YP_001132317.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mva:Mvan_5784 MscS mechanosensitive ion channel YP_001132318.1 PFAM: MOSC domain containing protein; KEGG: mva:Mvan_5783 MOSC domain containing protein YP_001132319.1 KEGG: mva:Mvan_5782 hypothetical protein YP_001132320.1 KEGG: mva:Mvan_5781 conserved hypothetical protein YP_001132321.1 PFAM: protein of unknown function DUF1697; KEGG: mva:Mvan_5780 protein of unknown function DUF1697 YP_001132322.1 PFAM: cobalamin synthesis CobW domain protein; KEGG: mva:Mvan_5779 cobalamin synthesis protein, P47K YP_001132323.1 PFAM: cobalamin synthesis protein, P47K; KEGG: mva:Mvan_5779 cobalamin synthesis protein, P47K YP_001132324.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sco:SCO4931 hypothetical protein YP_001132325.1 KEGG: msm:MSMEG_5543 hypothetical protein YP_001132326.1 PFAM: aminotransferase class-III; KEGG: mva:Mvan_5776 aminotransferase class-III YP_001132327.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001132328.1 PFAM: HNH endonuclease; protein of unknown function DUF222; KEGG: mav:MAV_0536 hypothetical protein YP_001132329.1 PFAM: protein of unknown function UPF0089; KEGG: mva:Mvan_5773 protein of unknown function UPF0089 YP_001132330.1 PFAM: protein of unknown function UPF0061; KEGG: mva:Mvan_5772 protein of unknown function UPF0061 YP_001132331.1 KEGG: mva:Mvan_5771 hypothetical protein YP_001132332.1 KEGG: mva:Mvan_5770 conserved hypothetical protein YP_001132333.1 KEGG: mva:Mvan_5767 conserved hypothetical protein YP_001132334.1 KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like YP_001132335.1 PFAM: glutamine cyclotransferase; KEGG: mva:Mvan_5761 glutamine cyclotransferase YP_001132336.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mva:Mvan_5760 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001132337.1 PFAM: beta-lactamase; KEGG: mva:Mvan_5757 beta-lactamase YP_001132338.1 KEGG: mva:Mvan_5756 conserved hypothetical protein YP_001132339.1 KEGG: mva:Mvan_5755 conserved hypothetical protein YP_001132340.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_5754 glyoxalase/bleomycin resistance protein/dioxygenase YP_001132341.1 PFAM: Rhomboid family protein; KEGG: mva:Mvan_5753 rhomboid family protein YP_001132342.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_5751 beta-phosphoglucomutase family hydrolase YP_001132343.1 PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mva:Mvan_5750 kojibiose phosphorylase YP_001132344.1 KEGG: mva:Mvan_5749 hypothetical protein YP_001132345.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mva:Mvan_5748 general substrate transporter YP_001132346.1 KEGG: mva:Mvan_5747 conserved hypothetical protein YP_001132347.1 KEGG: mva:Mvan_5745 conserved hypothetical protein YP_001132348.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mva:Mvan_5744 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001132349.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_5743 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132350.1 KEGG: mva:Mvan_5742 extracellular solute-binding protein, family 1 YP_001132351.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_5741 binding-protein-dependent transport systems inner membrane component YP_001132352.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_5740 binding-protein-dependent transport systems inner membrane component YP_001132353.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_5739 ABC transporter-related protein YP_001132354.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mva:Mvan_5738 orotate phosphoribosyltransferase YP_001132355.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_5737 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132356.1 KEGG: mva:Mvan_5736 conserved hypothetical protein YP_001132357.1 KEGG: mva:Mvan_5735 conserved hypothetical protein YP_001132358.1 KEGG: mva:Mvan_5729 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain YP_001132359.1 PFAM: isochorismatase hydrolase; KEGG: mva:Mvan_5728 isochorismatase hydrolase YP_001132360.1 PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: mva:Mvan_5727 putative PAS/PAC sensor protein YP_001132361.1 KEGG: mva:Mvan_5726 conserved hypothetical protein YP_001132362.1 KEGG: mva:Mvan_5725 conserved hypothetical protein YP_001132363.1 KEGG: mkm:Mkms_5199 conserved hypothetical protein YP_001132364.1 KEGG: mva:Mvan_5724 conserved hypothetical protein YP_001132365.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_5722 acyl-CoA dehydrogenase domain protein YP_001132366.1 PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_4647 major facilitator superfamily MFS_1 YP_001132367.1 KEGG: mva:Mvan_5720 conserved hypothetical protein YP_001132368.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mva:Mvan_5719 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132369.1 PFAM: glycosyl transferase, group 1; KEGG: mva:Mvan_5718 glycosyl transferase, group 1 YP_001132370.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_5717 methyltransferase type 11 YP_001132371.1 KEGG: mva:Mvan_5716 conserved hypothetical protein YP_001132372.1 KEGG: mva:Mvan_5715 conserved hypothetical protein YP_001132373.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5713 transcriptional regulator, TetR family YP_001132374.1 PFAM: cytochrome P450; KEGG: mva:Mvan_5712 cytochrome P450 YP_001132375.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_001132376.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mva:Mvan_5708 methionine-R-sulfoxide reductase YP_001132377.1 KEGG: mva:Mvan_5706 conserved hypothetical protein YP_001132378.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; KEGG: mva:Mvan_5705 NAD-dependent epimerase/dehydratase YP_001132379.1 PFAM: FAD dependent oxidoreductase; KEGG: mva:Mvan_5703 FAD dependent oxidoreductase YP_001132380.1 PFAM: protein of unknown function DUF427; KEGG: mva:Mvan_5702 protein of unknown function DUF427 YP_001132381.1 KEGG: mva:Mvan_5701 conserved hypothetical protein YP_001132382.1 PFAM: Ferritin, Dps family protein; KEGG: mva:Mvan_5700 ferritin, Dps family protein YP_001132383.1 PFAM: thioesterase superfamily protein; KEGG: mva:Mvan_5699 uncharacterized domain 1 YP_001132384.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mva:Mvan_5698 glutamate synthase (ferredoxin) YP_001132385.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001132386.1 KEGG: mva:Mvan_5696 conserved hypothetical protein YP_001132387.1 PFAM: luciferase family protein; KEGG: mva:Mvan_5695 luciferase family protein YP_001132388.1 KEGG: mva:Mvan_5694 conserved hypothetical protein YP_001132389.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mva:Mvan_5693 sulphate transporter YP_001132390.1 PFAM: regulatory protein, ArsR; KEGG: mva:Mvan_5692 regulatory protein, ArsR YP_001132391.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mva:Mvan_5687 PHP C-terminal domain protein YP_001132392.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001132393.1 PFAM: FAD dependent oxidoreductase; KEGG: mva:Mvan_5683 conserved hypothetical protein YP_001132394.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_001132395.1 KEGG: mva:Mvan_5681 conserved hypothetical protein YP_001132396.1 PFAM: copper resistance D domain protein; KEGG: mva:Mvan_5680 copper resistance D domain protein YP_001132397.1 PFAM: copper resistance protein CopC; KEGG: mva:Mvan_5679 copper resistance protein CopC YP_001132398.1 KEGG: mva:Mvan_5678 conserved hypothetical protein YP_001132399.1 KEGG: mva:Mvan_5677 conserved hypothetical protein YP_001132400.1 KEGG: mva:Mvan_5676 conserved hypothetical protein YP_001132401.1 KEGG: mva:Mvan_5675 conserved hypothetical protein YP_001132402.1 KEGG: mva:Mvan_5674 conserved hypothetical protein YP_001132403.1 KEGG: mva:Mvan_5673 conserved hypothetical protein YP_001132404.1 KEGG: mva:Mvan_5672 conserved hypothetical protein YP_001132405.1 KEGG: mva:Mvan_5671 superoxide dismutase YP_001132406.1 KEGG: mva:Mvan_5670 putative phage repressor YP_001132408.1 PFAM: Rhodanese domain protein; KEGG: mva:Mvan_5669 rhodanese domain protein YP_001132409.1 KEGG: mva:Mvan_5668 conserved hypothetical protein YP_001132410.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mva:Mvan_5667 glycerophosphoryl diester phosphodiesterase YP_001132411.1 PFAM: Ferritin, Dps family protein; KEGG: mva:Mvan_5666 ferritin, Dps family protein YP_001132412.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: msm:MSMEG_6421 transcriptional regulator YP_001132413.1 PFAM: Abortive infection protein; KEGG: mva:Mvan_5664 abortive infection protein YP_001132414.1 KEGG: mva:Mvan_5663 conserved hypothetical protein YP_001132415.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis YP_001132416.1 PFAM: Phosphoglycerate mutase; KEGG: mva:Mvan_5661 phosphoglycerate mutase YP_001132417.1 KEGG: mkm:Mkms_5120 conserved hypothetical protein YP_001132418.1 PFAM: protein of unknown function DUF1025; KEGG: msm:MSMEG_6415 hypothetical protein YP_001132419.1 KEGG: mva:Mvan_5660 conserved hypothetical protein YP_001132420.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001132421.1 KEGG: mva:Mvan_5658 conserved hypothetical protein YP_001132422.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_5657 Rieske (2Fe-2S) domain protein YP_001132423.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mva:Mvan_5656 phospholipid/glycerol acyltransferase YP_001132424.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mva:Mvan_5655 phospholipid/glycerol acyltransferase YP_001132425.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: mva:Mvan_5654 Cof-like hydrolase YP_001132426.1 PFAM: regulatory protein, LuxR; KEGG: mva:Mvan_5653 regulatory protein, LuxR YP_001132427.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; LGFP repeat protein; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: mva:Mvan_5652 LGFP repeat protein YP_001132428.1 PFAM: Repeat of unknown function XGLTT; KEGG: mva:Mvan_5651 exported repetitive protein precursor PirG (cell surface protein) (EXP53) YP_001132429.1 PFAM: UDP-galactopyranose mutase; KEGG: mva:Mvan_5650 UDP-galactopyranose mutase YP_001132430.1 KEGG: mva:Mvan_5649 glycosyltransferases-like protein YP_001132431.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: mva:Mvan_5648 phosphoesterase, PA-phosphatase related YP_001132432.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate YP_001132433.1 KEGG: mva:Mvan_5646 conserved hypothetical protein YP_001132434.1 PFAM: putative esterase; KEGG: mva:Mvan_5645 putative esterase YP_001132435.1 PFAM: putative esterase; KEGG: mva:Mvan_5644 putative esterase YP_001132436.1 KEGG: mva:Mvan_5643 hypothetical protein YP_001132437.1 PFAM: cutinase; KEGG: mva:Mvan_5642 cutinase YP_001132438.1 activates fatty acids by binding to coenzyme A YP_001132439.1 PFAM: beta-ketoacyl synthase; Thioesterase; acyl transferase domain protein; phosphopantetheine-binding; KEGG: mva:Mvan_5640 beta-ketoacyl synthase YP_001132440.1 PFAM: carboxyl transferase; KEGG: mva:Mvan_5639 carboxyl transferase YP_001132441.1 KEGG: mva:Mvan_5638 hypothetical protein YP_001132442.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mva:Mvan_5635 protein kinase YP_001132443.1 PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5632 cell wall arabinan synthesis protein YP_001132444.1 PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5631 cell wall arabinan synthesis protein YP_001132445.1 PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5630 cell wall arabinan synthesis protein YP_001132446.1 KEGG: mva:Mvan_5629 putative conserved transmembrane protein YP_001132447.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5628 short-chain dehydrogenase/reductase SDR YP_001132448.1 PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_5627 FAD linked oxidase domain protein YP_001132449.1 PFAM: GtrA family protein; KEGG: mva:Mvan_5626 GtrA family protein YP_001132450.1 PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mva:Mvan_0728 protein of unknown function DUF222 YP_001132451.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: mva:Mvan_5625 putative transcriptional regulator, GntR family YP_001132452.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_5624 alkylhydroperoxidase-like protein, AhpD family YP_001132453.1 KEGG: mva:Mvan_5621 conserved hypothetical protein YP_001132454.1 PFAM: ABC-2 type transporter; KEGG: mva:Mvan_5620 ABC-2 type transporter YP_001132455.1 PFAM: glycosyl transferase, family 2; KEGG: mva:Mvan_5619 glycosyl transferase, family 2 YP_001132456.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_5618 ABC transporter-related protein YP_001132457.1 KEGG: mva:Mvan_5617 conserved hypothetical protein YP_001132458.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; KEGG: mva:Mvan_5616 cysteine desulfurase family protein YP_001132459.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_5615 alcohol dehydrogenase, zinc-binding domain protein YP_001132460.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_5614 transcriptional regulator, MarR family YP_001132461.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: mva:Mvan_4710 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001132462.1 KEGG: mpa:MAP1633c hypothetical protein YP_001132463.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001132464.1 KEGG: mva:Mvan_5612 conserved hypothetical protein YP_001132465.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: mva:Mvan_5611 aminotransferase, class I and II YP_001132466.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mva:Mvan_5610 cytochrome-c oxidase YP_001132467.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mpa:MAP2050 IS1601_B_2 transposase YP_001132468.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: mkm:Mkms_5066 phosphodiesterase, MJ0936 family YP_001132469.1 PFAM: transposase, IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein YP_001132470.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_5607 cupin 2, conserved barrel domain protein YP_001132471.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_5606 beta-lactamase domain protein YP_001132472.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5605 short-chain dehydrogenase/reductase SDR YP_001132473.1 PFAM: Phosphoglycerate mutase; KEGG: mva:Mvan_5604 phosphoglycerate mutase YP_001132474.1 PFAM: aminoglycoside phosphotransferase; KEGG: mva:Mvan_5603 aminoglycoside phosphotransferase YP_001132475.1 PFAM: transglutaminase domain protein; KEGG: mva:Mvan_1043 transglutaminase domain protein YP_001132476.1 KEGG: mva:Mvan_5602 conserved hypothetical protein YP_001132477.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mva:Mvan_5601 substrate-binding region of ABC-type glycine betaine transport system YP_001132478.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_5600 ABC transporter-related protein YP_001132479.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_5599 binding-protein-dependent transport systems inner membrane component YP_001132480.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_5598 binding-protein-dependent transport systems inner membrane component YP_001132481.1 PFAM: protein of unknown function DUF1089; KEGG: mva:Mvan_5597 protein of unknown function DUF1089 YP_001132482.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_001132483.1 KEGG: mva:Mvan_5595 conserved hypothetical protein YP_001132484.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mva:Mvan_5594 CMP/dCMP deaminase, zinc-binding YP_001132485.1 KEGG: mva:Mvan_5592 conserved hypothetical protein YP_001132486.1 KEGG: dge:Dgeo_1244 hypothetical protein YP_001132487.1 PFAM: CsbD family protein; KEGG: mkm:Mkms_4790 CsbD family protein YP_001132488.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_5590 alcohol dehydrogenase GroES domain protein YP_001132489.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: mva:Mvan_5589 PTS system, mannitol-specific IIC subunit YP_001132490.1 PFAM: regulatory protein, DeoR; KEGG: mva:Mvan_5588 transcriptional regulator, DeoR family YP_001132491.1 KEGG: mva:Mvan_5587 hypothetical protein YP_001132492.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mva:Mvan_5586 2-nitropropane dioxygenase, NPD YP_001132493.1 KEGG: mva:Mvan_5585 dihydrodipicolinate reductase YP_001132494.1 KEGG: mva:Mvan_5584 putative secreted protein YP_001132495.1 PFAM: protein of unknown function DUF732; KEGG: mva:Mvan_5583 protein of unknown function DUF732 YP_001132496.1 PFAM: lipoprotein antigen family protein; KEGG: mva:Mvan_5582 hypothetical protein YP_001132497.1 KEGG: mva:Mvan_5581 hypothetical protein YP_001132498.1 KEGG: mva:Mvan_5580 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_001132499.1 PFAM: cytochrome P450; KEGG: mva:Mvan_5579 cytochrome P450 YP_001132500.1 PFAM: amine oxidase; KEGG: mva:Mvan_5578 amine oxidase (flavin-containing) YP_001132501.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_5577 ABC transporter-related protein YP_001132502.1 KEGG: mva:Mvan_5576 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor YP_001132503.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu YP_001132504.1 PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; UbiC transcription regulator-associated domain protein; KEGG: mva:Mvan_5574 UbiC transcription regulator-associated domain protein YP_001132505.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_5573 short-chain dehydrogenase/reductase SDR YP_001132506.1 PFAM: aminoglycoside phosphotransferase; KEGG: mva:Mvan_5572 aminoglycoside phosphotransferase YP_001132507.1 KEGG: mva:Mvan_5571 conserved hypothetical protein YP_001132508.1 PFAM: microcompartments protein; KEGG: mva:Mvan_5570 microcompartments protein YP_001132509.1 KEGG: mva:Mvan_5569 ethanolamine utilization protein EutN/carboxysome structural protein CcmL YP_001132510.1 KEGG: mva:Mvan_5568 conserved hypothetical protein YP_001132511.1 PFAM: microcompartments protein; KEGG: mva:Mvan_5567 microcompartments protein YP_001132512.1 PFAM: aldehyde dehydrogenase; KEGG: mva:Mvan_5566 aldehyde dehydrogenase YP_001132513.1 PFAM: aminotransferase class-III; KEGG: mva:Mvan_5565 aminotransferase class-III YP_001132514.1 PFAM: amino acid permease-associated region; KEGG: mva:Mvan_5564 amino acid permease-associated region YP_001132515.1 PFAM: dehydratase, large subunit; dehydratase, medium subunit; KEGG: mva:Mvan_5563 glycerol dehydratase YP_001132516.1 KEGG: mva:Mvan_5562 propanediol utilization: dehydratase, small subunit YP_001132517.1 KEGG: mva:Mvan_5561 conserved hypothetical protein YP_001132518.1 KEGG: mva:Mvan_5553 conserved hypothetical protein YP_001132519.1 KEGG: msm:MSMEG_6531 hypothetical protein YP_001132520.1 PFAM: cytochrome c oxidase, subunit III; KEGG: msm:MSMEG_6530 cytochrome c oxidase subunit III family protein YP_001132521.1 KEGG: msm:MSMEG_6529 hypothetical protein YP_001132522.1 KEGG: msm:MSMEG_6528 hypothetical protein YP_001132523.1 PFAM: regulatory protein, TetR; KEGG: msm:MSMEG_6527 transcriptional regulator, TetR family protein YP_001132524.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_001132525.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mkm:Mkms_5026 glucose-methanol-choline oxidoreductase YP_001132526.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_1918 short-chain dehydrogenase/reductase SDR YP_001132527.1 PFAM: cytochrome P450; KEGG: mav:MAV_1389 NikQ protein YP_001132528.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mkm:Mkms_5025 short-chain dehydrogenase/reductase SDR YP_001132529.1 PFAM: cytochrome P450; KEGG: mkm:Mkms_5024 cytochrome P450 YP_001132530.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_5023 short-chain dehydrogenase/reductase SDR YP_001132531.1 PFAM: luciferase family protein; KEGG: mkm:Mkms_5022 luciferase family protein YP_001132532.1 PFAM: nitroreductase; KEGG: mva:Mvan_5547 nitroreductase YP_001132533.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mkm:Mkms_5020 short-chain dehydrogenase/reductase SDR YP_001132534.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mkm:Mkms_5019 glyoxalase/bleomycin resistance protein/dioxygenase YP_001132535.1 KEGG: mkm:Mkms_5018 luciferase-like protein YP_001132536.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_4929 cytochrome P450 YP_001132537.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_5009 short-chain dehydrogenase/reductase SDR YP_001132538.1 KEGG: mkm:Mkms_5008 conserved hypothetical protein YP_001132539.1 KEGG: msm:MSMEG_2841 putative monooxygenase YP_001132540.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_5007 transcriptional regulator, TetR family YP_001132541.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001132542.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mva:Mvan_5188 protein of unknown function DUF222 YP_001132543.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_001132544.1 PFAM: DNA primase, small subunit; KEGG: mva:Mvan_5542 conserved hypothetical protein YP_001132545.1 KEGG: mva:Mvan_5541 hypothetical protein YP_001132546.1 PFAM: Thioesterase; KEGG: mva:Mvan_5540 thioesterase YP_001132547.1 PFAM: dihydrodipicolinate reductase; KEGG: mva:Mvan_5538 dihydrodipicolinate reductase YP_001132548.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mva:Mvan_5537 PDZ/DHR/GLGF domain protein YP_001132549.1 KEGG: mva:Mvan_5536 conserved hypothetical protein YP_001132550.1 PFAM: aminotransferase, class I and II; KEGG: mva:Mvan_5535 putative transcriptional regulator, GntR family YP_001132551.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA YP_001132552.1 KEGG: mva:Mvan_5533 conserved hypothetical protein YP_001132553.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_5532 cyclopropane-fatty-acyl-phospholipid synthase YP_001132554.1 PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_5531 FAD linked oxidase domain protein YP_001132555.1 KEGG: mva:Mvan_5530 conserved hypothetical protein YP_001132556.1 PFAM: cell wall hydrolase/autolysin; KEGG: mva:Mvan_5529 cell wall hydrolase/autolysin YP_001132557.1 PFAM: conserved hypothetical protein 103; KEGG: mva:Mvan_5528 conserved hypothetical protein 103 YP_001132558.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001132559.1 KEGG: mva:Mvan_5526 conserved hypothetical protein YP_001132560.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: mva:Mvan_5521 CobB/CobQ domain protein glutamine amidotransferase YP_001132561.1 PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; KEGG: mva:Mvan_5520 domain of unknown function DUF1727 YP_001132562.1 3'-5' exonuclease of DNA polymerase III YP_001132563.1 KEGG: mva:Mvan_5515 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_001132565.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_5514 transcriptional regulator, XRE family YP_001132566.1 PFAM: FAD dependent oxidoreductase; KEGG: mva:Mvan_5513 FAD dependent oxidoreductase YP_001132567.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mva:Mvan_5512 ferredoxin-dependent glutamate synthase YP_001132568.1 PFAM: glutamate synthase, alpha subunit domain protein; KEGG: mva:Mvan_5511 glutamate synthase, alpha subunit domain protein YP_001132569.1 PFAM: glutamine amidotransferase, class-II; KEGG: mva:Mvan_5510 glutamine amidotransferase, class-II YP_001132570.1 PFAM: glutamine synthetase, catalytic region; KEGG: mva:Mvan_5509 glutamate--ammonia ligase YP_001132571.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mkm:Mkms_4980 ammonium transporter YP_001132572.1 PFAM: Choloylglycine hydrolase; KEGG: mva:Mvan_5516 choloylglycine hydrolase YP_001132573.1 PFAM: nitroreductase; KEGG: mva:Mvan_5505 nitroreductase YP_001132574.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_001132575.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_001132576.1 KEGG: mva:Mvan_5502 conserved hypothetical protein YP_001132577.1 KEGG: mva:Mvan_5494 conserved hypothetical protein YP_001132578.1 PFAM: Catalase domain protein; KEGG: mva:Mvan_5493 catalase YP_001132579.1 PFAM: ribosomal protein S18; KEGG: mva:Mvan_5492 ribosomal protein S18 YP_001132580.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001132581.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001132582.1 PFAM: ribosomal protein L28; KEGG: mva:Mvan_5489 ribosomal protein L28 YP_001132583.1 PFAM: cobalamin synthesis CobW domain protein; KEGG: mva:Mvan_5488 cobalamin synthesis CobW domain protein YP_001132584.1 KEGG: mva:Mvan_5487 conserved hypothetical protein YP_001132585.1 PFAM: glutamate--cysteine ligase, GCS2; KEGG: mva:Mvan_5486 glutamate--cysteine ligase, GCS2 YP_001132586.1 PFAM: protein of unknown function DUF323; KEGG: mva:Mvan_5485 protein of unknown function DUF323 YP_001132587.1 KEGG: mva:Mvan_5484 conserved hypothetical protein YP_001132588.1 KEGG: mva:Mvan_5483 conserved hypothetical protein YP_001132589.1 PFAM: aminotransferase, class V; KEGG: mva:Mvan_5482 aminotransferase, class V YP_001132590.1 PFAM: EAL domain protein; KEGG: mva:Mvan_1667 diguanylate phosphodiesterase YP_001132591.1 PFAM: cytochrome P450; KEGG: mva:Mvan_5481 cytochrome P450 YP_001132592.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5480 transcriptional regulator, TetR family YP_001132593.1 PFAM: sodium:dicarboxylate symporter; KEGG: mkm:Mkms_4242 sodium:dicarboxylate symporter YP_001132594.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_5471 methyltransferase type 11 YP_001132595.1 KEGG: mva:Mvan_5470 conserved hypothetical protein YP_001132596.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_5469 methyltransferase type 11 YP_001132597.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_001132598.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; KEGG: mva:Mvan_5464 peptide chain release factor 3 YP_001132599.1 PFAM: aldo/keto reductase; KEGG: mva:Mvan_5463 aldo/keto reductase YP_001132600.1 PFAM: transcriptional regulator PadR family protein; KEGG: mva:Mvan_5462 transcriptional regulator, PadR-like family YP_001132601.1 PFAM: transcriptional regulator PadR family protein; KEGG: mkm:Mkms_4959 transcriptional regulator, PadR-like family YP_001132602.1 PFAM: Carotenoid oxygenase; KEGG: mva:Mvan_5460 carotenoid oxygenase YP_001132603.1 PFAM: RDD domain containing protein; KEGG: mva:Mvan_5459 RDD domain containing protein YP_001132604.1 PFAM: protein of unknown function DUF95, transmembrane; KEGG: mva:Mvan_5458 conserved hypothetical protein YP_001132605.1 KEGG: mva:Mvan_5457 conserved hypothetical protein YP_001132606.1 PFAM: protein of unknown function DUF58; KEGG: mva:Mvan_5456 protein of unknown function DUF58 YP_001132607.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mva:Mvan_5455 ATPase associated with various cellular activities, AAA_3 YP_001132608.1 KEGG: mva:Mvan_5454 conserved hypothetical protein YP_001132609.1 KEGG: mva:Mvan_5453 conserved hypothetical protein YP_001132610.1 KEGG: mva:Mvan_5452 putative conserved transmembrane protein YP_001132611.1 PFAM: luciferase family protein; KEGG: mva:Mvan_5448 luciferase family protein YP_001132612.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: mva:Mvan_5447 phosphoesterase, PA-phosphatase related YP_001132613.1 KEGG: mva:Mvan_0052 hypothetical protein YP_001132614.1 KEGG: mva:Mvan_5446 hypothetical protein YP_001132615.1 PFAM: N-6 DNA methylase; KEGG: mva:Mvan_5445 methyltransferase small YP_001132616.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mkm:Mkms_1384 transcriptional regulator, LysR family YP_001132617.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001132618.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_1385 3-oxoadipate enol-lactonase YP_001132619.1 KEGG: msm:MSMEG_1898 succinyl-CoA:3-ketoacid-coenzyme A transferase 1, precursor; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001132620.1 KEGG: mkm:Mkms_1387 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001132621.1 PFAM: regulatory protein, LuxR; KEGG: msm:MSMEG_1901 DNA-binding HTH domain containing protein, putative YP_001132622.1 PFAM: Tetratricopeptide TPR_4; KEGG: msm:MSMEG_1901 DNA-binding HTH domain containing protein, putative YP_001132623.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; short-chain dehydrogenase/reductase SDR; Oxidoreductase FAD-binding domain protein; GntR domain protein; KEGG: mkm:Mkms_1389 oxidoreductase FAD-binding domain protein YP_001132624.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: msm:MSMEG_1907 toluate 1,2-dioxygenase beta subunit YP_001132625.1 PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: msm:MSMEG_1908 benzoate 1,2-dioxygenase alpha subunit YP_001132626.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: msm:MSMEG_1909 putative HTH-type transcriptional regulator YnfL YP_001132627.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: msm:MSMEG_1910 muconate cycloisomerase YP_001132628.1 KEGG: mkm:Mkms_1394 catechol 1,2-dioxygenase; TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase, N-terminal domain protein YP_001132629.1 PFAM: Muconolactone delta-isomerase; KEGG: msm:MSMEG_1912 muconolactone delta-isomerase 1 YP_001132630.1 KEGG: mkm:Mkms_4090 conserved hypothetical protein YP_001132631.1 PFAM: protein of unknown function DUF81; KEGG: mkm:Mkms_4089 protein of unknown function DUF81 YP_001132632.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mkm:Mkms_1779 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001132633.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mva:Mvan_5444 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001132634.1 PFAM: metallophosphoesterase; KEGG: mva:Mvan_5443 metallophosphoesterase YP_001132635.1 PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; PASTA domain containing protein; KEGG: mva:Mvan_5442 glycosyl transferase, family 51 YP_001132636.1 PFAM: transcription factor WhiB; KEGG: mva:Mvan_5441 transcription factor WhiB YP_001132637.1 PFAM: Anion-transporting ATPase; KEGG: mva:Mvan_5440 anion-transporting ATPase YP_001132638.1 PFAM: Anion-transporting ATPase; KEGG: mva:Mvan_5439 anion-transporting ATPase YP_001132639.1 PFAM: Endoribonuclease L-PSP; KEGG: mva:Mvan_5437 endoribonuclease L-PSP YP_001132640.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_5436 beta-lactamase domain protein YP_001132641.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mva:Mvan_5435 putative transcriptional regulator, Crp/Fnr family YP_001132642.1 KEGG: mva:Mvan_5434 putative membrane protein YP_001132643.1 KEGG: mva:Mvan_5433 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_001132644.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mva:Mvan_5432 redoxin domain protein YP_001132645.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_5431 NUDIX hydrolase YP_001132646.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: mva:Mvan_5430 colicin V production protein YP_001132647.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_5429 alpha/beta hydrolase fold YP_001132648.1 PFAM: protein of unknown function DUF1469; KEGG: mva:Mvan_5428 protein of unknown function DUF1469 YP_001132649.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: mva:Mvan_5427 peptidase S1 and S6, chymotrypsin/Hap YP_001132650.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001132651.1 KEGG: mmc:Mmcs_4808 hypothetical protein YP_001132652.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_4807 HAD-superfamily subfamily IB, PSPase-like protein YP_001132653.1 KEGG: mmc:Mmcs_4806 hypothetical protein YP_001132654.1 PFAM: type II secretion system protein E; KEGG: mmc:Mmcs_4805 type II secretion system protein E YP_001132655.1 PFAM: type II secretion system protein; KEGG: mva:Mvan_5406 type II secretion system protein YP_001132656.1 PFAM: type II secretion system protein; KEGG: mmc:Mmcs_4803 type II secretion system protein YP_001132657.1 KEGG: mbo:Mb3679c hypothetical protein YP_001132659.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_2907 serine/threonine protein kinase YP_001132660.1 KEGG: mmc:Mmcs_4800 hypothetical protein YP_001132661.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_4799 DEAD/DEAH box helicase-like protein YP_001132662.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mmc:Mmcs_4798 cold-shock DNA-binding domain protein YP_001132663.1 KEGG: mva:Mvan_5397 conserved hypothetical protein YP_001132664.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_001132665.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_4795 adenylate/guanylate cyclase YP_001132666.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA YP_001132667.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mpa:MAP3812c hypothetical protein YP_001132669.1 PFAM: Allergen V5/Tpx-1 family protein; KEGG: mav:MAV_0327 hypothetical protein YP_001132670.1 KEGG: mmc:Mmcs_4790 hypothetical protein YP_001132671.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4789 UDP-glucose 4-epimerase YP_001132672.1 KEGG: mva:Mvan_5388 putative conserved integral membrane protein YP_001132673.1 PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mmc:Mmcs_4787 peptidase M1, membrane alanine aminopeptidase YP_001132674.1 TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_4786 non-ribosomal peptide synthetase-like protein YP_001132675.1 PFAM: Integral membrane protein TerC; KEGG: mmc:Mmcs_4785 integral membrane protein TerC YP_001132676.1 KEGG: mmc:Mmcs_4784 hypothetical protein YP_001132677.1 KEGG: mmc:Mmcs_4780 hypothetical protein YP_001132678.1 PFAM: Inorganic pyrophosphatase; KEGG: mbo:Mb3652 inorganic pyrophosphatase YP_001132679.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: mmc:Mmcs_4778 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001132680.1 KEGG: mmc:Mmcs_4777 hypothetical protein YP_001132681.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mva:Mvan_5378 tRNA(Ile)-lysidine synthetase YP_001132682.1 KEGG: mmc:Mmcs_4775 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001132683.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sma:SAV6590 dehydrogenase YP_001132684.1 PFAM: protein of unknown function DUF541; KEGG: mmc:Mmcs_4774 protein of unknown function DUF541 YP_001132685.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0446c EphA YP_001132686.1 KEGG: mmc:Mmcs_4770 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase YP_001132687.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_001132688.1 KEGG: mva:Mvan_5370 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_001132689.1 TIGRFAM: dihydroneopterin aldolase; KEGG: mmc:Mmcs_4767 dihydroneopterin aldolase YP_001132690.1 KEGG: mmc:Mmcs_4766 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YP_001132691.1 KEGG: mpa:MAP0453 hypothetical protein YP_001132692.1 KEGG: mmc:Mmcs_4764 hypothetical protein YP_001132693.1 KEGG: mva:Mvan_5365 NAD-dependent glycerol-3-phosphate dehydrogenase-like protein YP_001132694.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001132695.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_001132696.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_001132697.1 KEGG: mmc:Mmcs_4759 hypothetical protein YP_001132698.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_001132699.1 KEGG: mpa:MAP0460 Lsr2 YP_001132700.1 PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_4756 ATPase AAA-2 YP_001132701.1 KEGG: mmc:Mmcs_4755 hypothetical protein YP_001132702.1 KEGG: mmc:Mmcs_4754 hypothetical protein YP_001132703.1 PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_4753 phosphoglycerate mutase YP_001132704.1 PFAM: beta-lactamase; KEGG: mmc:Mmcs_4752 putative conserved lipoprotein LpqF YP_001132705.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_5351 alpha/beta hydrolase fold YP_001132706.1 KEGG: mmc:Mmcs_4749 hypothetical protein YP_001132707.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_4748 transcriptional regulator, AraC family YP_001132708.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mmc:Mmcs_4746 HhH-GPD YP_001132709.1 PFAM: carbonic anhydrase; KEGG: mtc:MT3694 carbonic anhydrase YP_001132710.1 KEGG: mva:Mvan_5344 conserved hypothetical protein YP_001132711.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_001132712.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001132713.1 KEGG: mmc:Mmcs_4741 hypothetical protein YP_001132714.1 PFAM: transcription factor CarD; KEGG: mpa:MAP0475 CarD family transcriptional regulator YP_001132715.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_001132716.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001132717.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: mmc:Mmcs_4736 RNA methyltransferase TrmH, group 3 YP_001132718.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mva:Mvan_5336 arsenical pump membrane protein YP_001132719.1 KEGG: mmc:Mmcs_4733 hypothetical protein YP_001132720.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4729 major facilitator superfamily MFS_1 YP_001132721.1 PFAM: LamB/YcsF family protein; KEGG: mmc:Mmcs_4727 LamB/YcsF YP_001132722.1 PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_4720 thiosulfate sulfurtransferase YP_001132723.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_5270 diguanylate cyclase YP_001132724.1 PFAM: periplasmic solute binding protein; KEGG: mmc:Mmcs_4719 periplasmic solute binding protein YP_001132725.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4718 ABC transporter related YP_001132726.1 PFAM: ABC-3 protein; KEGG: mva:Mvan_5318 ABC-3 protein YP_001132727.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: mmc:Mmcs_4716 transcriptional regulator, LacI family YP_001132728.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: mmc:Mmcs_4714 HAD-superfamily hydrolase subfamily IIB YP_001132729.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4713 transcriptional regulator, TetR family YP_001132730.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4712 acyl-CoA dehydrogenase-like protein YP_001132731.1 KEGG: mmc:Mmcs_4711 hypothetical protein YP_001132732.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_4710 ferredoxin YP_001132733.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_5308 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001132734.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_4708 alpha/beta hydrolase fold YP_001132735.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4707 glyoxalase/bleomycin resistance protein/dioxygenase YP_001132736.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: mmc:Mmcs_4706 flavin reductase-like, FMN-binding protein YP_001132737.1 KEGG: fal:FRAAL5330 hypothetical protein YP_001132738.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5303 transcriptional regulator, TetR family YP_001132739.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_5302 alpha/beta hydrolase fold YP_001132740.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_4703 transcriptional regulator, LysR family YP_001132741.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4702 general substrate transporter YP_001132742.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5299 short-chain dehydrogenase/reductase SDR YP_001132743.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase YP_001132744.1 KEGG: mmc:Mmcs_4699 hypothetical protein YP_001132745.1 PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro08008 possible tetracycline resistance protein YP_001132746.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_001132747.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4697 acyl-CoA dehydrogenase-like protein YP_001132748.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein YP_001132749.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4695 acyl-CoA dehydrogenase-like protein YP_001132750.1 activates fatty acids by binding to coenzyme A YP_001132751.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4693 acyl-CoA dehydrogenase-like protein YP_001132752.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4692 short-chain dehydrogenase/reductase SDR YP_001132753.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4691 transcriptional regulator, TetR family YP_001132754.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001132756.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_5270 alcohol dehydrogenase GroES domain protein YP_001132757.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4686 2-nitropropane dioxygenase, NPD YP_001132758.1 KEGG: mmc:Mmcs_4685 putative CoA transferase beta subunit YP_001132759.1 PFAM: coenzyme A transferase; KEGG: mmc:Mmcs_4684 coenzyme A transferase YP_001132760.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001132761.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4682 short-chain dehydrogenase/reductase SDR YP_001132762.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_5264 short-chain dehydrogenase/reductase SDR YP_001132763.1 PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein YP_001132764.1 PFAM: glycosyl transferase, group 1; KEGG: cac:CAC3057 glycosyltransferase YP_001132765.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: hma:pNG7214 probable export protein YP_001132766.1 KEGG: mva:Mvan_5250 hypothetical protein YP_001132767.1 PFAM: O-antigen polymerase YP_001132768.1 PFAM: glycosyl transferase, group 1; KEGG: sru:SRU_2402 glycosyl transferase YP_001132769.1 KEGG: mva:Mvan_5247 hypothetical protein YP_001132770.1 PFAM: glycosyl transferase, group 1; KEGG: tma:TM0622 lipopolysaccharide biosynthesis protein, putative YP_001132771.1 PFAM: glycosyl transferase, group 1; KEGG: sil:SPO1536 glycosyltransferase, group 1 YP_001132772.1 KEGG: ade:Adeh_3359 hypothetical protein YP_001132773.1 KEGG: mpa:MAP0970 hypothetical protein YP_001132774.1 KEGG: mva:Mvan_5243 hypothetical protein YP_001132775.1 KEGG: mpa:MAP0519c hypothetical protein YP_001132776.1 KEGG: mmc:Mmcs_4679 hypothetical protein YP_001132777.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001132778.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_4677 cytochrome P450 YP_001132779.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_5257 acyl-CoA dehydrogenase domain protein YP_001132780.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4675 acyl-CoA dehydrogenase-like protein YP_001132781.1 PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4674 protein of unknown function DUF35 YP_001132782.1 PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4673 MaoC-like dehydratase YP_001132783.1 KEGG: mmc:Mmcs_4672 lipid-transfer protein YP_001132784.1 KEGG: mmc:Mmcs_0059 hypothetical protein YP_001132785.1 KEGG: mva:Mvan_5241 FHA domain containing protein YP_001132787.1 KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein YP_001132788.1 PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4663 MaoC-like dehydratase YP_001132789.2 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_001132790.1 PFAM: Hydratase/decarboxylase; KEGG: mmc:Mmcs_4661 4-oxalocrotonate decarboxylase YP_001132791.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_001132792.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate YP_001132793.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: mmc:Mmcs_4658 channel protein, hemolysin III family YP_001132794.1 KEGG: mmc:Mmcs_4657 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like YP_001132795.1 KEGG: mmc:Mmcs_0163 hypothetical protein YP_001132796.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa19680 putative transcriptional regulator YP_001132797.1 PFAM: cytochrome P450; KEGG: msm:MSMEG_1167 cytochrome P450 YP_001132798.1 SMART: regulatory proteins, IclR; KEGG: mmc:Mmcs_4648 transcriptional regulator, IclR family YP_001132799.1 KEGG: mmc:Mmcs_4647 hypothetical protein YP_001132800.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4646 short-chain dehydrogenase/reductase SDR YP_001132801.1 KEGG: mkm:Mkms_4733 conserved hypothetical protein YP_001132802.1 KEGG: mmc:Mmcs_4641 hypothetical protein YP_001132803.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_5225 Rieske (2Fe-2S) domain protein YP_001132804.1 PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04380 probable multidrug resistance transporter, MFS superfamily YP_001132805.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5207 transcriptional regulator, TetR family YP_001132806.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001132807.1 KEGG: mva:Mvan_5221 lipid-transfer protein YP_001132808.1 PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4634 protein of unknown function DUF35 YP_001132809.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_4633 luciferase-like protein YP_001132810.1 KEGG: mpa:MAP0546c hypothetical protein YP_001132811.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_4631 cytochrome P450 YP_001132812.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001132813.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_001132814.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4626 2-nitropropane dioxygenase, NPD YP_001132815.1 thiamine-pyrophosphate requiring enzyme YP_001132816.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_5211 Rieske (2Fe-2S) domain protein YP_001132817.1 catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_001132818.1 activates fatty acids by binding to coenzyme A YP_001132819.1 activates fatty acids by binding to coenzyme A YP_001132820.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4623 acyl-CoA dehydrogenase-like protein YP_001132821.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4622 acyl-CoA dehydrogenase-like protein YP_001132822.1 KEGG: mmc:Mmcs_4621 FdxD YP_001132823.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001132824.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_4619 protein of unknown function DUF140 YP_001132825.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_4618 protein of unknown function DUF140 YP_001132826.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_5202 virulence factor Mce family protein YP_001132827.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4616 mammalian cell entry YP_001132828.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4615 mammalian cell entry YP_001132829.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4614 mammalian cell entry YP_001132830.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_5198 virulence factor Mce family protein YP_001132831.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_4612 mammalian cell entry YP_001132832.1 KEGG: mmc:Mmcs_4611 hypothetical protein YP_001132833.1 KEGG: mmc:Mmcs_4610 hypothetical protein YP_001132834.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_5247 NAD-dependent epimerase/dehydratase YP_001132835.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mmc:Mmcs_0326 NAD-dependent epimerase/dehydratase YP_001132836.1 PFAM: glycosyl transferase, family 20; KEGG: mmc:Mmcs_4609 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_001132837.1 KEGG: mmc:Mmcs_4608 hypothetical protein YP_001132838.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001132839.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4606 short-chain dehydrogenase/reductase SDR YP_001132840.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_4603 (2Fe-2S)-binding protein YP_001132841.1 PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_4602 carbon-monoxide dehydrogenase YP_001132842.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mmc:Mmcs_4601 carbon monoxide dehydrogenase subunit G YP_001132843.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mmc:Mmcs_4600 carbon-monoxide dehydrogenase YP_001132844.1 PFAM: protein of unknown function DUF182; KEGG: mva:Mvan_5182 protein of unknown function DUF182 YP_001132845.1 PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: mva:Mvan_5181 peptidase M15D, VanX D-ala-D-ala dipeptidase YP_001132846.1 KEGG: mmc:Mmcs_0411 hypothetical protein YP_001132847.1 TIGRFAM: trehalose synthase; KEGG: mmc:Mmcs_0346 trehalose synthase YP_001132848.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_4592 hypothetical protein YP_001132849.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_4592 hypothetical protein YP_001132850.1 KEGG: mva:Mvan_5176 conserved hypothetical protein YP_001132851.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4590 two component transcriptional regulator, winged helix family YP_001132852.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_4589 periplasmic sensor signal transduction histidine kinase YP_001132853.1 PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_4588 histidine triad (HIT) protein YP_001132854.1 KEGG: mmc:Mmcs_3307 hypothetical protein YP_001132855.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_5172 AMP-dependent synthetase and ligase YP_001132856.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6740 short-chain dehydrogenase/reductase SDR YP_001132857.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_0332 cytochrome P450 YP_001132858.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0666c hypothetical protein YP_001132859.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0330 short-chain dehydrogenase/reductase SDR YP_001132860.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_0329 luciferase-like protein YP_001132861.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4587 short-chain dehydrogenase/reductase SDR YP_001132862.1 PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_4586 nuclear transport factor 2 YP_001132863.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_4585 alcohol dehydrogenase GroES-like protein YP_001132864.1 KEGG: mmc:Mmcs_4584 hypothetical protein YP_001132865.1 KEGG: mmc:Mmcs_4583 hypothetical protein YP_001132866.1 PFAM: cytochrome P450; KEGG: mva:Mvan_5161 cytochrome P450 YP_001132867.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4581 short-chain dehydrogenase/reductase SDR YP_001132868.1 PFAM: cytochrome P450; KEGG: mpa:MAP0600c putative cytochrome P450 YP_001132869.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4579 transcriptional regulator, TetR family YP_001132870.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4578 aldehyde dehydrogenase YP_001132871.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4577 short-chain dehydrogenase/reductase SDR YP_001132872.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4576 6-phosphogluconate dehydrogenase, NAD-binding protein YP_001132873.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0605 hypothetical protein YP_001132874.1 KEGG: mkm:Mkms_4662 conserved hypothetical protein YP_001132875.1 KEGG: mmc:Mmcs_4791 hypothetical protein YP_001132876.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5152 transcriptional regulator, TetR family YP_001132877.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_4572 cytochrome P450 YP_001132878.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_001132879.1 PFAM: putative esterase; KEGG: mmc:Mmcs_4570 putative esterase YP_001132880.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4569 putative transcriptional regulator, TetR family YP_001132881.1 PFAM: amino acid permease-associated region; KEGG: mva:Mvan_5147 amino acid permease-associated region YP_001132882.1 PFAM: RelA/SpoT domain protein; KEGG: mbo:Mb0799c hypothetical protein YP_001132883.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001132884.1 PFAM: protein of unknown function DUF1707; KEGG: rha:RHA1_ro05172 hypothetical protein YP_001132885.1 KEGG: mmc:Mmcs_4561 putative conserved transmembrane protein YP_001132886.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001132887.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: mmc:Mmcs_4559 oligopeptidase B YP_001132888.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4558 transcriptional regulator, TetR family YP_001132889.1 PFAM: glutathione peroxidase; KEGG: mmc:Mmcs_4557 glutathione peroxidase YP_001132890.1 KEGG: mmc:Mmcs_4556 hypothetical protein YP_001132891.1 proposed role in polysaccahride synthesis YP_001132892.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_5131 beta-lactamase domain protein YP_001132893.1 KEGG: mmc:Mmcs_4554 hypothetical protein YP_001132894.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway YP_001132895.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001132896.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: mbo:Mb0821c 29 KDa antigen CFP29 YP_001132897.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mva:Mvan_5122 Dyp-type peroxidase family YP_001132898.1 catalyzes the removal of amino acids from the N termini of peptides YP_001132899.1 KEGG: mmc:Mmcs_4549 glyoxalase/bleomycin resistance protein/dioxygenase YP_001132900.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001132901.1 KEGG: mmc:Mmcs_4545 hypothetical protein YP_001132902.1 PFAM: Abortive infection protein; KEGG: mmc:Mmcs_4544 abortive infection protein YP_001132903.1 KEGG: mva:Mvan_5115 conserved hypothetical protein YP_001132904.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001132905.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4540 NAD-dependent epimerase/dehydratase YP_001132906.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001132907.1 KEGG: mbo:Mb0833c hypothetical protein YP_001132908.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: mmc:Mmcs_4536 glycine cleavage T protein (aminomethyl transferase) YP_001132909.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate YP_001132910.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1538 transcriptional regulator, TetR family YP_001132912.1 KEGG: mmc:Mmcs_4533 hypothetical protein YP_001132914.1 KEGG: mmc:Mmcs_4531 protein of unknown function DUF732 YP_001132915.1 PFAM: protein of unknown function DUF1416; KEGG: mva:Mvan_5102 protein of unknown function DUF1416 YP_001132916.1 PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_4529 thiosulfate sulfurtransferase YP_001132917.1 KEGG: mpa:MAP0646c hypothetical protein YP_001132918.1 PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_4527 thioredoxin domain protein YP_001132919.1 KEGG: mmc:Mmcs_4526 hypothetical protein YP_001132920.1 PFAM: transcriptional regulator domain protein; KEGG: mva:Mvan_5097 response regulator receiver protein YP_001132921.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_4524 GCN5-related N-acetyltransferase YP_001132922.1 PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2999 transcriptional regulator, ArsR family YP_001132923.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro04132 possible lactoylglutathione lyase YP_001132924.1 KEGG: mfa:Mfla_1491 arsenite-activated ATPase (ArsA); TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase YP_001132925.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: mva:Mvan_5095 arsenite-activated ATPase ArsA YP_001132926.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:pnf2260 putative arsenate reductase YP_001132927.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: nfa:pnf2250 putative arsenic resistance transporter YP_001132928.1 PFAM: regulatory protein, ArsR; KEGG: rha:RHA1_ro03367 probable transcriptional regulator, ArsR family YP_001132929.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_4521 protein tyrosine phosphatase YP_001132930.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; KEGG: mva:Mvan_5093 protein tyrosine phosphatase YP_001132931.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_4519 periplasmic phosphate binding protein YP_001132932.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4518 phosphate ABC transporter, permease protein PstC YP_001132933.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_4517 phosphate transport system permease protein 2 YP_001132934.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_001132935.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mmc:Mmcs_4514 phosphate uptake regulator, PhoU YP_001132936.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mmc:Mmcs_4513 cell envelope-related transcriptional attenuator YP_001132937.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: mmc:Mmcs_4512 dihydrouridine synthase TIM-barrel protein nifR3 YP_001132938.1 PFAM: fatty acid desaturase, type 2; KEGG: mmc:Mmcs_4940 fatty acid desaturase, type 2 YP_001132939.1 KEGG: mmc:Mmcs_4510 transcriptional regulator, TetR family YP_001132940.1 KEGG: mmc:Mmcs_4509 hypothetical protein YP_001132941.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rha:RHA1_ro00696 serine/threonine protein kinase YP_001132942.1 KEGG: mva:Mvan_5081 putative conserved exported protein YP_001132943.1 catalyzes the interconversion of chorismate to prephenate YP_001132944.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4507 transcriptional regulator, TetR family YP_001132945.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_5078 beta-lactamase domain protein YP_001132946.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4506 transcriptional regulator, TetR family YP_001132947.1 KEGG: mmc:Mmcs_4505 FAD dependent oxidoreductase YP_001132948.1 PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_4500 cyclase/dehydrase YP_001132949.1 PFAM: cyclase/dehydrase; KEGG: mva:Mvan_5072 cyclase/dehydrase YP_001132950.1 PFAM: aminotransferase, class I and II; KEGG: mmc:Mmcs_4497 aminotransferase, class I and II YP_001132951.1 PFAM: Urease accessory protein UreF; KEGG: pst:PSPTO_2412 urease accessory protein UreF YP_001132952.1 KEGG: reu:Reut_A0996 UreE urease accessory, N-terminal:UreE urease accessory, C-terminal YP_001132953.1 PFAM: Urease accessory protein UreD; KEGG: nph:NP2016A urease accessory protein YP_001132954.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: pst:PSPTO_2409 urease accessory protein UreG YP_001132955.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001132956.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001132957.1 PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_2291 extracellular ligand-binding receptor YP_001132958.1 PFAM: regulatory protein, LuxR; KEGG: nfa:nfa28330 putative transcriptional regulator YP_001132959.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_4494 NADH:flavin oxidoreductase/NADH oxidase YP_001132960.1 KEGG: mpa:MAP0247c hypothetical protein YP_001132961.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001132962.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein YP_001132963.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: bte:BTH_II0282 transcriptional regulator, AraC family YP_001132964.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4491 AMP-dependent synthetase and ligase YP_001132965.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_4490 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_001132966.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_4489 luciferase-like protein YP_001132967.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mva:Mvan_5056 type III restriction enzyme, res subunit YP_001132968.1 KEGG: syw:SYNW0985 hypothetical protein YP_001132969.1 KEGG: mmc:Mmcs_4484 hypothetical protein YP_001132970.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_001132971.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mmc:Mmcs_4481 molybdopterin binding domain protein YP_001132972.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: mmc:Mmcs_4480 molybdopterin biosynthesis MoaE YP_001132973.1 PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_4479 transglycosylase-like protein YP_001132974.1 PFAM: thiamineS protein; KEGG: mmc:Mmcs_4478 thiamineS YP_001132975.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_001132976.1 PFAM: protein of unknown function DUF307; KEGG: mva:Mvan_5046 protein of unknown function DUF307 YP_001132977.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mmc:Mmcs_4475 cold-shock DNA-binding domain protein YP_001132978.1 KEGG: mmc:Mmcs_4474 putative glutathione S-transferase YP_001132979.1 KEGG: mmc:Mmcs_4473 putative conserved exported protein YP_001132980.1 KEGG: mva:Mvan_5040 major facilitator superfamily MFS_1 YP_001132981.1 KEGG: mmc:Mmcs_4471 hypothetical protein YP_001132982.1 PFAM: cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: mmc:Mmcs_4470 hypothetical protein YP_001132983.1 KEGG: mmc:Mmcs_4469 hypothetical protein YP_001132984.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mmc:Mmcs_4467 tRNA/rRNA methyltransferase (SpoU) YP_001132985.1 KEGG: mpa:MAP0821 hypothetical protein YP_001132986.1 KEGG: mmc:Mmcs_4465 hypothetical protein YP_001132987.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_001132988.1 KEGG: mva:Mvan_5032 conserved hypothetical protein YP_001132989.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_4462 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001132990.1 KEGG: chu:CHU_0221 hypothetical protein YP_001132991.1 PFAM: glycoside hydrolase, family 1; KEGG: tko:TK1761 beta-glycosidase, GH1 family YP_001132992.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4461 glyoxalase/bleomycin resistance protein/dioxygenase YP_001132994.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle YP_001132995.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate YP_001132996.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4457 transcriptional regulator, TetR family YP_001132997.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_001132998.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4455 drug resistance transporter EmrB/QacA subfamily YP_001132999.1 PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_4454 transcriptional regulator, MarR family YP_001133000.1 KEGG: mmc:Mmcs_4452 hypothetical protein YP_001133001.1 KEGG: mva:Mvan_5018 hypothetical protein YP_001133002.1 KEGG: mpa:MAP3123c hypothetical protein YP_001133003.1 KEGG: mmc:Mmcs_3857 hypothetical protein YP_001133004.1 KEGG: mva:Mvan_5015 hypothetical protein YP_001133005.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mmc:Mmcs_4926 transposase IS116/IS110/IS902 YP_001133007.1 KEGG: mmc:Mmcs_4451 hypothetical protein YP_001133008.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mmc:Mmcs_4450 peptidylprolyl isomerase, FKBP-type YP_001133010.1 PFAM: Integrase, catalytic region; KEGG: fra:Francci3_1958 integrase YP_001133011.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_4449 periplasmic sensor signal transduction histidine kinase YP_001133012.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_4448 two component transcriptional regulator, winged helix family YP_001133013.1 PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: mkm:Mkms_4534 ion transport 2 domain protein YP_001133014.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4446 ABC transporter related YP_001133015.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4445 ABC transporter related YP_001133016.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4444 ABC transporter related YP_001133017.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mmc:Mmcs_4440 epoxide hydrolase-like protein YP_001133018.1 KEGG: mva:Mvan_4997 conserved hypothetical protein YP_001133019.1 KEGG: cjk:jk0688 hypothetical protein YP_001133020.1 PFAM: ABC-2 type transporter; KEGG: mpa:MAP2367c hypothetical protein YP_001133021.1 KEGG: mkm:Mkms_5082 conserved hypothetical protein YP_001133022.1 PFAM: carboxyl transferase; KEGG: mmc:Mmcs_4432 carboxyl transferase YP_001133023.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133024.1 PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_4430 hypothetical protein YP_001133025.1 PFAM: beta-lactamase; KEGG: mva:Mvan_4990 beta-lactamase YP_001133026.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_4428 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter YP_001133027.1 KEGG: mpa:MAP0844 hypothetical protein YP_001133028.1 KEGG: mmc:Mmcs_4426 hypothetical protein YP_001133029.1 KEGG: mmc:Mmcs_4424 NAD-dependent epimerase/dehydratase YP_001133030.1 KEGG: hypothetical protein YP_001133031.1 PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein YP_001133032.1 PFAM: cytochrome P450; KEGG: mva:Mvan_4983 cytochrome P450 YP_001133034.1 PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4421 dihydrodipicolinate reductase YP_001133035.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP0332 hypothetical protein YP_001133036.1 PFAM: cytochrome P450; KEGG: rpa:RPA1732 possible cytochrome P450 YP_001133037.1 KEGG: mmc:Mmcs_4420 hypothetical protein YP_001133038.1 KEGG: mva:Mvan_4977 conserved hypothetical protein YP_001133040.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_4418 ATPase associated with various cellular activities, AAA_5 YP_001133041.1 PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_4417 MorD YP_001133042.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4973 transcriptional regulator, TetR family YP_001133043.1 KEGG: mmc:Mmcs_4415 hypothetical protein YP_001133044.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4414 short-chain dehydrogenase/reductase SDR YP_001133045.1 PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_4413 hypothetical protein YP_001133046.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rha:RHA1_ro00414 molybdopterin oxidoreductase YP_001133047.1 KEGG: mmc:Mmcs_1543 adenylate/guanylate cyclase YP_001133048.1 KEGG: mmc:Mmcs_1543 adenylate/guanylate cyclase YP_001133049.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nfa:nfa1410 hypothetical protein YP_001133050.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4412 AMP-dependent synthetase and ligase YP_001133051.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4411 short-chain dehydrogenase/reductase SDR YP_001133052.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4410 AMP-dependent synthetase and ligase YP_001133053.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: mva:Mvan_4965 regulatory protein GntR, HTH YP_001133054.1 PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat YP_001133055.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4407 short-chain dehydrogenase/reductase SDR YP_001133056.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4406 Rieske (2Fe-2S) region YP_001133057.1 PFAM: FAD dependent oxidoreductase; KEGG: mkm:Mkms_4492 cyclohexanone monooxygenase YP_001133058.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4404 short-chain dehydrogenase/reductase SDR YP_001133059.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4403 L-carnitine dehydratase/bile acid-inducible protein F YP_001133060.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4402 acyl-CoA dehydrogenase-like protein YP_001133061.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4401 acyl-CoA dehydrogenase-like protein YP_001133062.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4398 acyl-CoA dehydrogenase-like protein YP_001133063.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4397 acyl-CoA dehydrogenase-like protein YP_001133064.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mmc:Mmcs_4396 thiamine pyrophosphate enzyme-like TPP-binding protein YP_001133065.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4395 aldehyde dehydrogenase YP_001133066.1 KEGG: mkm:Mkms_2559 conserved hypothetical protein YP_001133067.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001133068.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0786 cyclopropane-fatty-acyl-phospholipid synthase YP_001133069.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 12; KEGG: mva:Mvan_4948 cyclopropane-fatty-acyl-phospholipid synthase YP_001133070.1 PFAM: protein of unknown function DUF849; KEGG: mmc:Mmcs_4383 protein of unknown function DUF849 YP_001133071.1 PFAM: protein of unknown function DUF985; KEGG: mmc:Mmcs_4382 protein of unknown function DUF985 YP_001133072.1 KEGG: mmc:Mmcs_4381 hypothetical protein YP_001133073.1 PFAM: heat shock protein Hsp20; KEGG: mmc:Mmcs_4380 heat shock protein HSP20 YP_001133074.1 PFAM: helix-turn-helix, HxlR type; KEGG: mmc:Mmcs_3097 transcriptional regulator, HxlR family YP_001133075.1 PFAM: Carotenoid oxygenase; KEGG: mva:Mvan_4940 carotenoid oxygenase YP_001133076.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001133077.1 PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_4379 response regulator receiver and ANTAR domain protein YP_001133078.1 KEGG: mmc:Mmcs_1195 hypothetical protein YP_001133080.1 KEGG: mmc:Mmcs_4377 hypothetical protein YP_001133081.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mmc:Mmcs_4376 cytochrome c oxidase, subunit III YP_001133082.1 KEGG: mmc:Mmcs_4375 hypothetical protein YP_001133083.1 KEGG: mva:Mvan_4930 luciferase family protein YP_001133084.1 ATP-dependent carboxylate-amine ligase YP_001133085.1 KEGG: mmc:Mmcs_4372 hypothetical protein YP_001133086.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins YP_001133087.1 PFAM: protein of unknown function DUF1365; KEGG: mmc:Mmcs_4370 protein of unknown function DUF1365 YP_001133088.1 PFAM: protein of unknown function DUF867; KEGG: mva:Mvan_4925 protein of unknown function DUF867 YP_001133090.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: mmc:Mmcs_4366 NRAMP family Mn2+/Fe2+ transporters YP_001133092.1 PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4363 dihydrodipicolinate reductase YP_001133093.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4362 short-chain dehydrogenase/reductase SDR YP_001133094.1 PFAM: Ku domain protein; KEGG: mmc:Mmcs_4361 Ku domain containing protein YP_001133095.1 PFAM: PfkB domain protein; KEGG: mva:Mvan_4916 PfkB domain protein YP_001133096.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity YP_001133097.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1381 hypothetical protein YP_001133098.1 KEGG: mpa:MAP1379 hypothetical protein YP_001133099.1 KEGG: mpa:MAP1378 hypothetical protein YP_001133100.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase family protein YP_001133101.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mpa:MAP1376c hypothetical protein YP_001133102.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001133103.1 PFAM: protein of unknown function DUF222; KEGG: mva:Mvan_4912 protein of unknown function DUF222 YP_001133104.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_001133105.1 KEGG: mva:Mvan_4904 conserved hypothetical protein YP_001133106.1 KEGG: mbo:Mb3577 hypothetical protein YP_001133108.1 PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06239 probable sugar efflux transporter, MFS superfamily YP_001133109.1 PFAM: ROK family protein; KEGG: rha:RHA1_ro02370 possible xylose repressor YP_001133110.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate YP_001133111.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_5081 Rieske (2Fe-2S) region YP_001133112.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mkm:Mkms_5168 amine oxidase YP_001133113.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_5079 methyltransferase type 12 YP_001133114.1 PFAM: Squalene/phytoene synthase; KEGG: mmc:Mmcs_5076 squalene/phytoene synthase YP_001133115.1 TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5075 amine oxidase YP_001133116.1 PFAM: Polyprenyl synthetase; KEGG: mmc:Mmcs_5074 polyprenyl synthetase YP_001133117.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mmc:Mmcs_3573 glycosyltransferase, MGT family YP_001133118.1 KEGG: mmc:Mmcs_4343 hypothetical protein YP_001133119.1 PFAM: membrane protein of unknown function; KEGG: mva:Mvan_4884 membrane protein of unknown function YP_001133120.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mmc:Mmcs_4336 DNA-formamidopyrimidine glycosylase YP_001133121.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0890 putative short-chain type dehydrogenase/reductase YP_001133122.1 PFAM: cytochrome P450; KEGG: mva:Mvan_4880 cytochrome P450 YP_001133123.1 PFAM: helix-turn-helix domain protein; KEGG: rha:RHA1_ro05020 possible transcriptional regulator YP_001133124.1 KEGG: rha:RHA1_ro05019 hypothetical protein YP_001133125.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_001133126.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4333 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_001133127.1 PFAM: acyltransferase 3; KEGG: mmc:Mmcs_4332 acyltransferase 3 YP_001133128.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: mva:Mvan_4874 chorismate mutase YP_001133129.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_4330 ATP-dependent DNA helicase PcrA YP_001133130.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro08197 possible transposase YP_001133131.1 KEGG: mmc:Mmcs_4329 hypothetical protein YP_001133132.1 PFAM: peptidase M23B; KEGG: mmc:Mmcs_4328 peptidase M23B YP_001133133.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001133134.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001133135.1 PFAM: regulatory protein, MarR; KEGG: gvi:gll1119 unknown protein YP_001133136.1 KEGG: mva:Mvan_4867 hypothetical protein YP_001133137.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001133138.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sth:STH305 transposase YP_001133139.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_4324 luciferase-like protein YP_001133140.1 KEGG: mmc:Mmcs_4322 hypothetical protein YP_001133141.1 KEGG: mmc:Mmcs_4321 hypothetical protein YP_001133142.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_001133143.1 involved in de novo purine biosynthesis YP_001133145.1 KEGG: mmc:Mmcs_4314 putative magnesium chelatase YP_001133146.1 SMART: von Willebrand factor, type A; KEGG: mmc:Mmcs_4313 von Willebrand factor, type A YP_001133147.1 PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_4310 protein of unknown function DUF1707 YP_001133148.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133149.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_4850 acyl-CoA dehydrogenase domain protein YP_001133150.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_4307 pyruvate carboxylase YP_001133151.1 PFAM: carboxyl transferase; KEGG: mmc:Mmcs_4306 propionyl-CoA carboxylase YP_001133152.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mkm:Mkms_4391 acyl-CoA dehydrogenase domain protein YP_001133153.1 PFAM: protein of unknown function DUF1446; KEGG: mmc:Mmcs_4304 protein of unknown function DUF1446 YP_001133154.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001133155.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpa:MAP0916 two-component response regulator YP_001133156.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_4300 periplasmic sensor signal transduction histidine kinase YP_001133157.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mva:Mvan_4842 peptidase S1 and S6, chymotrypsin/Hap YP_001133158.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mmc:Mmcs_4298 molybdopterin binding domain protein YP_001133159.1 KEGG: mmc:Mmcs_4296 hypothetical protein YP_001133160.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_001133162.1 PFAM: SAF domain; KEGG: mtc:MT1019 hypothetical protein YP_001133163.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: mmc:Mmcs_4292 putative regulatory protein, FmdB YP_001133164.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mva:Mvan_4834 5-formyltetrahydrofolate cyclo-ligase YP_001133165.1 PFAM: Nucleotidyl transferase; KEGG: mmc:Mmcs_4290 nucleotidyl transferase YP_001133166.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: mmc:Mmcs_4289 MoeA-like, domain I and II YP_001133167.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP0926 ribosomal-protein-alanine acetyltransferase YP_001133168.1 KEGG: mva:Mvan_4830 conserved hypothetical protein YP_001133169.1 PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_1488 transcriptional regulator, ArsR family YP_001133170.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmc:Mmcs_1489 cation diffusion facilitator family transporter YP_001133171.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0336 transcriptional regulator, TetR family YP_001133172.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0335 short-chain dehydrogenase/reductase SDR YP_001133173.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0334 short-chain dehydrogenase/reductase SDR YP_001133174.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_0333 carboxymuconolactone decarboxylase YP_001133175.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP2782 hypothetical protein YP_001133176.1 PFAM: cytochrome P450; KEGG: mkm:Mkms_4653 cytochrome P450 YP_001133177.1 KEGG: mmc:Mmcs_2577 hypothetical protein YP_001133178.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_4823 transcriptional regulator, MarR family YP_001133179.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0744c probable oxidoreductase YP_001133180.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0745c putative 4-carboxymuconolactone decarboxylase YP_001133181.1 KEGG: bur:Bcep18194_B1171 hypothetical protein YP_001133182.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_4442 diguanylate cyclase YP_001133183.1 PFAM: GCN5-related N-acetyltransferase; cyclic nucleotide-binding; KEGG: mva:Mvan_4818 cyclic nucleotide-binding protein YP_001133184.1 catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001133185.1 KEGG: mmc:Mmcs_4282 LpqN YP_001133186.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_4281 PE-PPE-like protein YP_001133187.1 KEGG: mmc:Mmcs_4280 hypothetical protein YP_001133188.1 KEGG: mbo:Mb1026 hypothetical protein YP_001133189.1 KEGG: mmc:Mmcs_4278 hypothetical protein YP_001133190.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; Redox-sensitive transcriptional activator SoxR; KEGG: mva:Mvan_4811 putative transcriptional regulator, MerR family YP_001133191.1 catalyzes the degradation of arginine to citruline and ammonia YP_001133192.1 PFAM: glycosyl transferase, family 39; KEGG: mmc:Mmcs_4274 glycosyl transferase, family 39 YP_001133193.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmc:Mmcs_4273 protein of unknown function UPF0011 YP_001133194.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine YP_001133195.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mva:Mvan_4806 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001133196.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP0947c hypothetical protein YP_001133197.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_001133198.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_001133199.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mmc:Mmcs_4265 TatD-related deoxyribonuclease YP_001133200.1 PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: mmc:Mmcs_4264 transglycosylase-like protein YP_001133201.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001133202.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis YP_001133203.1 activates fatty acids by binding to coenzyme A YP_001133204.1 KEGG: mmc:Mmcs_4260 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001133205.1 PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_4259 ABC-2 type transporter YP_001133206.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001133207.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001133208.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4252 short-chain dehydrogenase/reductase SDR YP_001133209.1 KEGG: mva:Mvan_4785 lipoprotein, putative YP_001133210.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mmc:Mmcs_4250 arsenate reductase YP_001133211.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_001133212.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_001133213.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mmc:Mmcs_5236 GreA/GreB family elongation factor YP_001133214.1 KEGG: mva:Mvan_4779 putative DNA-binding protein YP_001133215.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4247 transcriptional regulator, TetR family YP_001133216.1 KEGG: mmc:Mmcs_4245 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like YP_001133217.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_001133218.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: rha:RHA1_ro05773 hypothetical protein YP_001133219.1 PFAM: protein of unknown function DUF451; KEGG: rha:RHA1_ro05774 hypothetical protein YP_001133220.1 PFAM: iron permease FTR1; KEGG: rha:RHA1_ro05775 possible membrane protein YP_001133221.1 KEGG: mmc:Mmcs_4241 putative conserved lipoprotein LpqU YP_001133222.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001133223.1 PFAM: Septum formation initiator; KEGG: mmc:Mmcs_4239 septum formation initiator YP_001133224.1 PFAM: protein of unknown function DUF501; KEGG: mva:Mvan_4769 protein of unknown function DUF501 YP_001133225.1 PFAM: Ppx/GppA phosphatase; KEGG: mmc:Mmcs_4237 Ppx/GppA phosphatase YP_001133226.1 KEGG: mmc:Mmcs_4233 hypothetical protein YP_001133227.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4231 AMP-dependent synthetase and ligase YP_001133228.1 PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT0142 epoxide hydrolase YP_001133230.1 KEGG: rha:RHA1_ro00126 hypothetical protein YP_001133231.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_4753 short-chain dehydrogenase/reductase SDR YP_001133232.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mpa:MAP1425c hypothetical protein YP_001133233.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: rha:RHA1_ro01657 probable flavin oxygenase YP_001133234.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP3263c hypothetical protein YP_001133235.1 KEGG: mpa:MAP3244 hypothetical protein YP_001133236.1 KEGG: mva:Mvan_4747 conserved hypothetical protein YP_001133237.1 KEGG: mmc:Mmcs_2527 hypothetical protein YP_001133238.1 KEGG: mpa:MAP0383 hypothetical protein YP_001133239.1 KEGG: mmc:Mmcs_1337 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001133240.1 KEGG: mpa:MAP2472 hypothetical protein YP_001133242.1 KEGG: sco:SCO0615 secreted protein YP_001133249.1 PFAM: Resolvase, N-terminal domain; KEGG: nca:Noca_1088 resolvase, N-terminal domain YP_001133251.1 PFAM: phage integrase family protein; KEGG: fal:FRAAL1760 integrase YP_001133253.1 KEGG: cjk:jk1246 hypothetical protein YP_001133254.1 PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_5006 protein of unknown function DUF222 YP_001133255.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: mkm:Mkms_4261 superoxide dismutase, copper/zinc binding YP_001133256.1 KEGG: mmc:Mmcs_4212 hypothetical protein YP_001133257.1 KEGG: mmc:Mmcs_4219 hypothetical protein YP_001133259.1 activates fatty acids by binding to coenzyme A YP_001133261.1 KEGG: nfa:nfa30280 hypothetical protein YP_001133262.1 PFAM: formate/nitrite transporter; KEGG: mmc:Mmcs_0716 formate/nitrite transporter YP_001133263.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_001133264.1 PFAM: Spore germination protein; amino acid permease-associated region; KEGG: mmc:Mmcs_3371 amino acid permease-associated region YP_001133265.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_3370 UspA YP_001133266.1 PFAM: secretory lipase; KEGG: rha:RHA1_ro05804 hypothetical protein YP_001133267.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: 7-alpha-hydroxysteroid dehydrogenase YP_001133268.1 KEGG: mkm:Mkms_4253 hypothetical protein YP_001133269.1 PFAM: glutamine amidotransferase, class-II; KEGG: mbo:Mb1090 hypothetical protein YP_001133270.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3408 protein of unknown function UPF0089 YP_001133272.1 KEGG: rxy:Rxyl_1146 hypothetical protein YP_001133273.1 KEGG: mbo:Mb0734 probable conserved transmembrane protein YP_001133274.1 KEGG: mmc:Mmcs_0054 hypothetical protein YP_001133275.1 PFAM: Cl- channel, voltage-gated family protein; KEGG: mmc:Mmcs_4200 Cl-channel, voltage gated YP_001133276.1 KEGG: mpa:MAP3904 hypothetical protein YP_001133277.1 KEGG: mva:Mvan_4717 conserved hypothetical protein YP_001133278.1 PFAM: protein of unknown function DUF732; KEGG: rha:RHA1_ro00508 hypothetical protein YP_001133280.1 KEGG: mmc:Mmcs_1256 hypothetical protein YP_001133281.1 PFAM: Acetamidase/Formamidase; KEGG: mmc:Mmcs_2379 acetamidase/formamidase YP_001133282.1 PFAM: protein of unknown function UPF0016; KEGG: rha:RHA1_ro04005 possible membrane protein YP_001133283.1 KEGG: mva:Mvan_4707 hypothetical protein YP_001133284.1 PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro01348 probable multidrug resistance transporter, MFS superfamily YP_001133285.1 KEGG: mva:Mvan_4705 conserved hypothetical protein YP_001133286.1 PFAM: protein of unknown function DUF732 YP_001133287.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_5157 anti-sigma-factor antagonist YP_001133288.1 PFAM: CsbD family protein YP_001133289.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_4700 anti-sigma-factor antagonist YP_001133290.1 KEGG: mmc:Mmcs_4179 hypothetical protein YP_001133291.1 PFAM: Thiolase; KEGG: mbo:Mb2813c probable lipid-transfer protein Ltp1 YP_001133292.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rha:RHA1_ro11100 probable serine/threonine protein kinase YP_001133293.1 KEGG: mva:Mvan_4692 dihydrodipicolinate reductase YP_001133294.1 KEGG: mpa:MAP1009 hypothetical protein YP_001133295.1 PFAM: Patatin; KEGG: mmc:Mmcs_4171 patatin YP_001133296.1 PFAM: Patatin; KEGG: mmc:Mmcs_4170 patatin YP_001133297.1 PFAM: regulatory protein, ArsR; Activator of Hsp90 ATPase 1 family protein; KEGG: nfa:nfa55010 putative transcriptional regulator YP_001133298.1 KEGG: mmc:Mmcs_4169 LpqV YP_001133299.1 PFAM: cysteine dioxygenase type I; KEGG: mva:Mvan_4684 cysteine dioxygenase type I YP_001133300.1 SMART: Rhodanese domain protein; KEGG: mmc:Mmcs_4167 rhodanese-like protein YP_001133301.1 KEGG: mmc:Mmcs_4157 hypothetical protein YP_001133302.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133303.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA YP_001133304.1 PFAM: protein of unknown function DUF1112; KEGG: mva:Mvan_4679 protein of unknown function DUF1112 YP_001133305.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_001133306.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001133307.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_4151 lipolytic enzyme, G-D-S-L YP_001133308.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mva:Mvan_4675 alpha/beta hydrolase fold-3 domain protein YP_001133309.1 KEGG: mmc:Mmcs_4149 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001133310.1 KEGG: mmc:Mmcs_4148 hypothetical protein YP_001133311.1 PFAM: RDD domain containing protein; KEGG: mpa:MAP1025 Pra YP_001133312.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine YP_001133313.1 KEGG: mmc:Mmcs_4145 hypothetical protein YP_001133314.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001133315.1 KEGG: mmc:Mmcs_4143 putative conserved membrane protein YP_001133316.1 PFAM: LmbE family protein; KEGG: mmc:Mmcs_4142 LmbE-like protein YP_001133317.1 KEGG: mmc:Mmcs_4141 hypothetical protein YP_001133318.1 PFAM: protein of unknown function DUF255; KEGG: mmc:Mmcs_4140 protein of unknown function DUF255 YP_001133319.1 PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_4139 nuclear transport factor 2 YP_001133320.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: mva:Mvan_4663 channel protein, hemolysin III family YP_001133321.1 KEGG: mbo:Mb1115 short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase) (Z-farnesyl diphosphate synthase) (Z-FPP synthetase) (Z-farnesyl diphosphate synthetase) (geranyltranstransferase) (farnesyl pyrophosphate synthetase); TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001133322.1 KEGG: mmc:Mmcs_4136 hypothetical protein YP_001133323.1 KEGG: mpa:MAP2701c hypothetical protein YP_001133324.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_001133325.1 KEGG: mmc:Mmcs_4132 hypothetical protein YP_001133326.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001133327.1 PFAM: fatty acid desaturase, type 2; KEGG: mmc:Mmcs_4130 fatty acid desaturase, type 2 YP_001133328.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: mmc:Mmcs_4129 PhoH-like protein YP_001133329.1 PFAM: polysaccharide deacetylase; KEGG: mbo:Mb1126 possible glycosyl hydrolase YP_001133331.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_001133332.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_001133333.1 KEGG: mmc:Mmcs_4120 hypothetical protein YP_001133334.1 PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_4119 hypothetical protein YP_001133335.1 PFAM: protein of unknown function UPF0118; KEGG: mva:Mvan_4645 protein of unknown function UPF0118 YP_001133336.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4117 short-chain dehydrogenase/reductase SDR YP_001133337.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4116 short-chain dehydrogenase/reductase SDR YP_001133338.1 KEGG: mva:Mvan_4642 conserved hypothetical protein YP_001133339.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase YP_001133341.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_4109 3-beta hydroxysteroid dehydrogenase/isomerase YP_001133342.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: mva:Mvan_4634 exodeoxyribonuclease VII, small subunit YP_001133343.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_001133344.1 KEGG: mva:Mvan_4632 conserved hypothetical protein YP_001133345.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001133346.1 PFAM: penicillin-binding protein, transpeptidase; NTF2 domain protein N-terminal transpeptidase; KEGG: nfa:nfa18430 putative penicillin-binding protein YP_001133347.1 KEGG: mmc:Mmcs_4103 hypothetical protein YP_001133348.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001133349.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_3951 GCN5-related N-acetyltransferase YP_001133350.1 KEGG: mmc:Mmcs_4705 hypothetical protein YP_001133351.1 KEGG: mmc:Mmcs_1829 hypothetical protein YP_001133352.1 KEGG: mpa:MAP0078 hypothetical protein YP_001133354.1 KEGG: rha:RHA1_ro02581 protein kinase YP_001133355.1 KEGG: mmc:Mmcs_4093 hypothetical protein YP_001133356.1 KEGG: msm:MSMEG_5212 hypothetical protein YP_001133357.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_4092 adenylate/guanylate cyclase YP_001133358.1 KEGG: mva:Mvan_4612 conserved hypothetical protein YP_001133359.1 PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein YP_001133360.1 PFAM: protein of unknown function DUF1486; Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein YP_001133361.1 PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; KEGG: mmc:Mmcs_4091 aminotransferase class-III YP_001133362.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_4090 alpha/beta hydrolase fold YP_001133363.1 PFAM: regulatory protein, TetR; KEGG: fal:FRAAL4803 putative TetR family transcriptional regulator YP_001133364.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mva:Mvan_4607 3-demethylubiquinone-9 3-methyltransferase YP_001133365.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_1522 protein of unknown function DUF140 YP_001133366.1 PFAM: protein of unknown function DUF140; KEGG: mva:Mvan_4605 protein of unknown function DUF140 YP_001133367.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1654 mammalian cell entry YP_001133368.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1655 mammalian cell entry YP_001133369.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_4602 virulence factor Mce family protein YP_001133370.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2021 virulence factor mce family protein YP_001133371.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2022 virulence factor mce family protein YP_001133372.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry YP_001133373.1 KEGG: mmc:Mmcs_4088 hypothetical protein YP_001133374.1 KEGG: mtc:MT2024.1 hypothetical protein YP_001133375.1 KEGG: mmc:Mmcs_4084 protein of unknown function UPF0089 YP_001133376.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0672c possible transcriptional regulatory protein (probably TetR-family) YP_001133377.1 PFAM: Carotenoid oxygenase; KEGG: mpa:MAP0465 hypothetical protein YP_001133378.1 PFAM: DoxX family protein; KEGG: mmc:Mmcs_4083 DoxX YP_001133379.1 KEGG: mmc:Mmcs_4082 hypothetical protein YP_001133380.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4081 regulatory protein GntR, HTH YP_001133381.1 KEGG: pgi:PG0690 4-hydroxybutyrate CoA-transferase YP_001133382.1 KEGG: mkm:Mkms_4156 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase YP_001133383.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_4079 enoyl-CoA hydratase/isomerase YP_001133384.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4078 acyl-CoA dehydrogenase-like protein YP_001133385.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_4077 beta-Ig-H3/fasciclin YP_001133386.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eli:ELI_10345 oxidoreductase, short-chain dehydrogenase/reductase family protein YP_001133387.1 KEGG: mmc:Mmcs_4076 carbonic anhydrases/acetyltransferases isoleucine patch superfamily-like protein YP_001133388.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: mva:Mvan_4583 NAD-dependent epimerase/dehydratase YP_001133389.1 PFAM: Abortive infection protein; KEGG: mpa:MAP2640c hypothetical protein YP_001133390.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B2916 zinc-containing alcohol dehydrogenase superfamily YP_001133391.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133392.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4069 L-carnitine dehydratase/bile acid-inducible protein F YP_001133393.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4068 short-chain dehydrogenase/reductase SDR YP_001133394.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4067 2-nitropropane dioxygenase, NPD YP_001133395.1 KEGG: mva:Mvan_4575 conserved hypothetical protein YP_001133396.1 PFAM: TQO small subunit DoxD; DoxX family protein; KEGG: mva:Mvan_4574 DoxX family protein YP_001133397.1 PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4064 MmpL YP_001133398.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4572 transcriptional regulator, TetR family YP_001133399.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_4063 methyltransferase type 12 YP_001133400.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_001133401.1 PFAM: regulatory protein GntR, HTH; KEGG: mva:Mvan_4569 regulatory protein GntR, HTH YP_001133402.1 PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_4060 O-methyltransferase-like protein YP_001133403.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_4058 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_001133404.1 KEGG: mpa:MAP2629c hypothetical protein YP_001133405.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mva:Mvan_4564 SSS sodium solute transporter superfamily YP_001133406.1 PFAM: protein of unknown function DUF485; KEGG: mmc:Mmcs_4054 protein of unknown function DUF485 YP_001133407.1 PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_4053 Na+/solute symporter YP_001133408.1 KEGG: mmc:Mmcs_4052 hypothetical protein YP_001133409.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mmc:Mmcs_4051 response regulator receiver protein YP_001133410.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: mmc:Mmcs_4050 signal transduction histidine kinase, LytS YP_001133412.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001133413.1 PFAM: HhH-GPD family protein; KEGG: mmc:Mmcs_4049 HhH-GPD YP_001133414.1 PFAM: Resolvase, N-terminal domain; KEGG: mva:Mvan_4555 resolvase, N-terminal domain YP_001133415.1 PFAM: nitroreductase; KEGG: fal:FRAAL2433 putative NADH dehydrogenase (H(2)O(2) forming NADH oxidase) (NADH:oxygen oxidoreductase) YP_001133416.1 KEGG: mmc:Mmcs_4048 hypothetical protein YP_001133417.1 KEGG: mva:Mvan_4552 conserved hypothetical protein YP_001133418.1 KEGG: mva:Mvan_4551 conserved hypothetical protein YP_001133419.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_001133420.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4043 NUDIX hydrolase YP_001133421.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1264 major facilitator superfamily MFS_1 YP_001133422.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mmc:Mmcs_1263 nitrate reductase, alpha subunit YP_001133423.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: mmc:Mmcs_1262 nitrate reductase, beta subunit YP_001133424.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: mmc:Mmcs_1261 nitrate reductase molybdenum cofactor assembly chaperone YP_001133425.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: mmc:Mmcs_1260 respiratory nitrate reductase, gamma subunit YP_001133426.1 PFAM: protein of unknown function DUF1130; KEGG: rha:RHA1_ro08282 hypothetical protein YP_001133427.1 KEGG: mmc:Mmcs_4042 hypothetical protein YP_001133428.1 KEGG: mmc:Mmcs_4041 hypothetical protein YP_001133429.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: mmc:Mmcs_4040 GTP-binding protein TypA YP_001133430.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_4039 extracellular solute-binding protein, family 5 YP_001133431.1 PFAM: LmbE family protein; KEGG: mmc:Mmcs_4034 LmbE-like protein YP_001133432.1 KEGG: mmc:Mmcs_4033 hypothetical protein YP_001133433.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis YP_001133434.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: jan:Jann_2039 fumarylacetoacetate (FAA) hydrolase YP_001133435.1 PFAM: YceI family protein; KEGG: mmc:Mmcs_4031 YceI YP_001133436.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_4030 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001133437.1 catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis YP_001133438.1 PFAM: aldehyde dehydrogenase; Proline dehydrogenase; KEGG: art:Arth_3884 aldehyde dehydrogenase YP_001133439.1 KEGG: mmc:Mmcs_4024 hypothetical protein YP_001133440.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4021 NUDIX hydrolase YP_001133441.1 activates fatty acids by binding to coenzyme A YP_001133442.1 KEGG: mmc:Mmcs_4019 hypothetical protein YP_001133443.1 PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: mmc:Mmcs_0342 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins YP_001133445.1 KEGG: mva:Mvan_4519 putative transferase YP_001133446.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate YP_001133447.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_4011 ABC transporter related YP_001133448.1 KEGG: mmc:Mmcs_4010 hypothetical protein YP_001133449.1 PFAM: Tetratricopeptide TPR_4; KEGG: mmc:Mmcs_4009 ATPas YP_001133450.1 PFAM: conserved hypothetical protein 730; KEGG: mva:Mvan_4511 conserved hypothetical protein 730 YP_001133451.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization YP_001133452.1 KEGG: mmc:Mmcs_4006 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_001133453.1 PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_4005 glycosyl transferase, family 2 YP_001133454.1 KEGG: mva:Mvan_4507 hypothetical protein YP_001133455.1 KEGG: mmc:Mmcs_4003 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_001133456.1 KEGG: mbo:Mb1243 hypothetical protein YP_001133457.1 TIGRFAM: glycogen synthase; PFAM: glycosyl transferase, group 1; KEGG: mva:Mvan_4504 glycogen synthase YP_001133458.1 PFAM: transposase, IS4 family protein; KEGG: cef:CE2553 insertion element conserved hypothetical protein YP_001133459.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_001133460.1 KEGG: mmc:Mmcs_2695 hypothetical protein YP_001133461.1 KEGG: tfu:Tfu_0955 hypothetical protein YP_001133462.1 KEGG: mmc:Mmcs_3998 putative ABC transporter membrane-spanning protein YP_001133463.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3997 ABC transporter related YP_001133464.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4498 transcriptional regulator, TetR family YP_001133465.1 PFAM: O-methyltransferase, family 3; Methyltransferase type 11; KEGG: mmc:Mmcs_3995 O-methyltransferase, family 3 YP_001133466.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein is involved in heat shock, oxidative stress and virulence YP_001133467.1 KEGG: mmc:Mmcs_3993 hypothetical protein YP_001133468.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mmc:Mmcs_3992 peptidase S1 and S6, chymotrypsin/Hap YP_001133469.1 mediates the export of protein precursors bearing twin-arginine signal peptides YP_001133470.1 PFAM: transposase, IS4 family protein; KEGG: mpa:MAP3467c hypothetical protein YP_001133471.1 PFAM: protein of unknown function DUF59; KEGG: mmc:Mmcs_3990 protein of unknown function DUF59 YP_001133472.1 KEGG: mva:Mvan_4490 lytic transglycosylase, catalytic YP_001133473.1 PFAM: protein of unknown function DUF1003; KEGG: mmc:Mmcs_3988 protein of unknown function DUF1003 YP_001133474.1 PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: mmc:Mmcs_3987 MgtE intracellular region YP_001133475.1 PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_3986 citryl-CoA lyase YP_001133476.1 KEGG: mva:Mvan_4486 conserved hypothetical protein YP_001133477.1 KEGG: mmc:Mmcs_3984 hypothetical protein YP_001133478.1 KEGG: mmc:Mmcs_3979 hypothetical protein YP_001133479.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; KEGG: mmc:Mmcs_3978 magnesium and cobalt transport protein CorA YP_001133480.1 PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: mmc:Mmcs_3977 malate dehydrogenase (oxaloacetate decarboxylating) YP_001133481.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_3976 substrate-binding region of ABC-type glycine betaine transport system YP_001133482.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3975 short-chain dehydrogenase/reductase SDR YP_001133483.1 PFAM: protein of unknown function DUF732; KEGG: mmc:Mmcs_3974 protein of unknown function DUF732 YP_001133484.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth YP_001133485.1 KEGG: mva:Mvan_4476 conserved hypothetical protein YP_001133486.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3971 drug resistance transporter Bcr/CflA subfamily YP_001133487.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3970 drug resistance transporter EmrB/QacA subfamily YP_001133488.1 KEGG: mbo:Mb2023 hypothetical protein YP_001133489.1 KEGG: mmc:Mmcs_3969 nuclease (RecB family)-like protein YP_001133490.1 KEGG: mmc:Mmcs_3968 LprE YP_001133491.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_3967 DEAD/DEAH box helicase-like protein YP_001133492.1 PFAM: acyltransferase 3; KEGG: mva:Mvan_4469 acyltransferase 3 YP_001133493.1 PFAM: Siderophore-interacting protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: mmc:Mmcs_3965 siderophore-interacting protein YP_001133494.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2519 hypothetical protein YP_001133495.1 PFAM: cytochrome P450; KEGG: mva:Mvan_4465 cytochrome P450 YP_001133496.1 PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_3961 D-lactate dehydrogenase (cytochrome) YP_001133498.1 KEGG: mmc:Mmcs_3960 hypothetical protein YP_001133499.1 PFAM: helix-turn-helix, HxlR type; KEGG: mmc:Mmcs_3959 transcriptional regulator, HxlR family YP_001133500.1 TIGRFAM: H+ Antiporter protein; PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_4461 H+ antiporter protein YP_001133501.1 KEGG: mmc:Mmcs_3233 putative conserved lipoprotein LppH YP_001133502.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mva:Mvan_4459 uracil-DNA glycosylase superfamily YP_001133503.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3956 luciferase-like protein YP_001133504.1 KEGG: mmc:Mmcs_3955 hypothetical protein YP_001133505.1 PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_3954 histidine triad (HIT) protein YP_001133506.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3953 glyoxalase/bleomycin resistance protein/dioxygenase YP_001133507.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mva:Mvan_4454 helix-turn-helix-domain containing protein, AraC type YP_001133508.1 KEGG: mmc:Mmcs_3950 hypothetical protein YP_001133509.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_3949 adenylate/guanylate cyclase YP_001133510.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nfa:nfa1600 putative cation transporter YP_001133511.1 PFAM: protein of unknown function DUF305; KEGG: mva:Mvan_4447 protein of unknown function DUF305 YP_001133512.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_001133513.1 PFAM: protein of unknown function DUF124; KEGG: mmc:Mmcs_3945 protein of unknown function DUF124 YP_001133514.1 KEGG: msm:MSMEG_5011 hypothetical protein YP_001133515.1 KEGG: mmc:Mmcs_3942 formate dehydrogenase YP_001133516.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_4441 ABC transporter, transmembrane region YP_001133517.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3940 ABC transporter related YP_001133518.1 KEGG: mmc:Mmcs_3939 putative lipoprotein LprB YP_001133519.1 KEGG: mmc:Mmcs_3938 putative lipoprotein LprC YP_001133520.1 PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3936 putative phosphohistidine phosphatase, SixA YP_001133521.1 PFAM: metallophosphoesterase; KEGG: mpa:MAP2494c hypothetical protein YP_001133522.1 KEGG: mva:Mvan_4435 conserved hypothetical protein YP_001133523.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2492c hypothetical protein YP_001133524.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_3931 extracellular solute-binding protein, family 5 YP_001133525.1 KEGG: mmc:Mmcs_3930 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase YP_001133526.1 KEGG: mmc:Mmcs_3929 binding-protein-dependent transport systems inner membrane component YP_001133527.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_4430 binding-protein-dependent transport systems inner membrane component YP_001133529.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10192 possible transposase YP_001133531.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10192 possible transposase YP_001133532.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mva:Mvan_4429 two component transcriptional regulator, winged helix family YP_001133533.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_3925 periplasmic sensor signal transduction histidine kinase YP_001133534.1 PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: mmc:Mmcs_3923 glycosyl transferase, family 2 YP_001133535.1 PFAM: glycosyl transferase, family 39; KEGG: mmc:Mmcs_3922 glycosyl transferase, family 39 YP_001133536.1 PFAM: carbonic anhydrase; KEGG: mmc:Mmcs_3921 carbonic anhydrase YP_001133537.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001133538.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis YP_001133539.1 PFAM: inositol monophosphatase; KEGG: mpa:MAP2058c CysQ_2 YP_001133541.1 PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3916 isochorismatase hydrolase YP_001133542.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mva:Mvan_4419 transcriptional regulator, BadM/Rrf2 family YP_001133543.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mbo:Mb2804c possible alanine rich oxidoreductase YP_001133544.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sil:SPO3597 amine oxidase, flavin-containing YP_001133545.1 KEGG: mva:Mvan_4387 conserved hypothetical protein YP_001133546.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_3909 two component transcriptional regulator, LuxR family YP_001133547.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_3908 putative signal transduction histidine kinase YP_001133548.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: art:Arth_4391 C4-dicarboxylate transporter/malic acid transport protein YP_001133549.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3907 luciferase-like protein YP_001133550.1 PFAM: protein of unknown function DUF899, thioredoxin family protein; KEGG: mmc:Mmcs_3906 protein of unknown function DUF899, thioredoxin-like protein YP_001133552.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5119 acyl-CoA dehydrogenase-like protein YP_001133553.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_4379 acyl-CoA dehydrogenase domain protein YP_001133554.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3013c hypothetical protein YP_001133555.1 PFAM: protein of unknown function DUF1460; KEGG: mmc:Mmcs_3420 protein of unknown function DUF1460 YP_001133556.1 PFAM: Lytic transglycosylase, catalytic; Transglycosylase domain protein; KEGG: mpa:MAP0586c hypothetical protein YP_001133557.1 KEGG: plt:Plut_0837 hypothetical protein YP_001133558.1 KEGG: mmc:Mmcs_2678 hypothetical protein YP_001133559.1 KEGG: mmc:Mmcs_2677 hypothetical protein YP_001133561.1 KEGG: mmc:Mmcs_3857 hypothetical protein YP_001133562.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001133563.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mmc:Mmcs_3897 diaminopimelate decarboxylase YP_001133564.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001133565.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_001133566.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_001133567.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001133568.1 PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_3890 transcriptional regulator, MarR family YP_001133569.1 KEGG: mmc:Mmcs_3889 hypothetical protein YP_001133570.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3892 transcriptional regulator, TetR family YP_001133571.1 activates fatty acids by binding to coenzyme A YP_001133572.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_001133573.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001133574.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: mmc:Mmcs_3886 modification methylase, HemK family YP_001133575.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: mva:Mvan_4337 SUA5/YciO/YrdC/YwlC family protein YP_001133576.1 PFAM: glycosyl transferase, family 4; KEGG: mmc:Mmcs_3884 glycosyl transferase, family 4 YP_001133577.1 KEGG: mmc:Mmcs_3883 hypothetical protein YP_001133578.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001133579.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_001133580.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_001133581.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001133582.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001133583.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001133584.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001133585.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001133586.1 KEGG: mmc:Mmcs_3874 hypothetical protein YP_001133587.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mmc:Mmcs_3873 cobalamin adenosyltransferase YP_001133588.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001133589.1 PFAM: transposase, IS4 family protein; KEGG: msm:MSMEG_6146 ISMsm3, transposase YP_001133590.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10192 possible transposase YP_001133591.1 KEGG: mmc:Mmcs_3871 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein YP_001133592.1 PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: mtc:MT1358 regulatory protein Ada, putative YP_001133593.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3703 transcriptional regulator, TetR family YP_001133594.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3702 Rieske (2Fe-2S) region YP_001133595.1 KEGG: mmc:Mmcs_3700 hypothetical protein YP_001133596.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3746 carboxymuconolactone decarboxylase YP_001133597.1 PFAM: glutaminase; KEGG: rha:RHA1_ro06842 probable glutaminase YP_001133598.1 PFAM: regulatory protein, LysR; KEGG: mva:Mvan_4315 transcriptional regulator, LysR family YP_001133599.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_5277 L-carnitine dehydratase/bile acid-inducible protein F YP_001133600.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5276 acyl-CoA dehydrogenase-like protein YP_001133601.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5275 acyl-CoA dehydrogenase-like protein YP_001133602.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_3868 adenylate/guanylate cyclase YP_001133603.1 PFAM: protein of unknown function DUF91; KEGG: mpa:MAP2439c hypothetical protein YP_001133604.1 KEGG: mva:Mvan_4307 conserved hypothetical protein YP_001133605.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3865 glyoxalase/bleomycin resistance protein/dioxygenase YP_001133606.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001133607.1 KEGG: mmc:Mmcs_3863 hypothetical protein YP_001133608.1 PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: mmc:Mmcs_3862 thioredoxin domain protein YP_001133609.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_001133610.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mmc:Mmcs_3860 alpha amylase, catalytic region YP_001133611.1 TIGRFAM: alpha-glucan phosphorylases; KEGG: mmc:Mmcs_3859 alpha-glucan phosphorylase YP_001133612.1 KEGG: mmc:Mmcs_3856 LpqM YP_001133613.1 SMART: helicase c2; DEAD-like helicases-like; KEGG: mmc:Mmcs_3855 helicase C2 YP_001133614.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_001133615.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_001133616.1 KEGG: mmc:Mmcs_3852 hypothetical protein YP_001133617.1 PFAM: peptidase S58, DmpA; KEGG: mmc:Mmcs_3851 peptidase S58, DmpA YP_001133618.1 PFAM: Mov34/MPN/PAD-1 family protein; KEGG: rha:RHA1_ro01438 possible Mov34/MPN/PAD-1 family protein YP_001133619.1 PFAM: thiamineS protein; KEGG: mmc:Mmcs_3849 thiamineS YP_001133620.1 KEGG: mmc:Mmcs_3848 cysteine synthases; TIGRFAM: cysteine synthases; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001133621.1 PFAM: Rhomboid family protein; KEGG: mmc:Mmcs_3847 rhomboid-like protein YP_001133622.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_001133623.1 KEGG: mva:Mvan_4288 beta-lactamase-like protein YP_001133624.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001133625.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: mmc:Mmcs_3843 Ham1-like protein YP_001133626.1 KEGG: mmc:Mmcs_1222 acyltransferase 3 YP_001133627.1 KEGG: mbo:Mb1377c hypothetical protein YP_001133628.1 KEGG: mmc:Mmcs_3840 lipoprotein, putative YP_001133629.1 KEGG: mva:Mvan_4282 conserved hypothetical protein YP_001133631.1 KEGG: mmc:Mmcs_5178 hypothetical protein YP_001133632.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro00069 probable hydrolase YP_001133633.1 PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_0057 transcription factor WhiB YP_001133634.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4277 transcriptional regulator, TetR family YP_001133635.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: mmc:Mmcs_2700 transcriptional regulator, AraC family YP_001133636.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2699 amidohydrolase 2 YP_001133637.1 PFAM: sulfatase; KEGG: mbo:Mb3104 possible hydrolase YP_001133638.1 KEGG: mmc:Mmcs_0894 cyclase/dehydrase YP_001133639.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4272 transcriptional regulator, TetR family YP_001133640.1 KEGG: mmc:Mmcs_0039 NAD-dependent epimerase/dehydratase YP_001133641.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0040 acyl-CoA dehydrogenase-like protein YP_001133642.1 KEGG: mmc:Mmcs_0041 hypothetical protein YP_001133643.1 PFAM: protein of unknown function DUF35; KEGG: mva:Mvan_4268 protein of unknown function DUF35 YP_001133644.1 KEGG: mva:Mvan_4267 conserved hypothetical protein YP_001133645.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0044 short-chain dehydrogenase/reductase SDR YP_001133646.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3831 general substrate transporter YP_001133647.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_3830 adenylate/guanylate cyclase YP_001133648.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mkm:Mkms_3906 major facilitator superfamily MFS_1 YP_001133649.1 KEGG: mmc:Mmcs_3829 hypothetical protein YP_001133650.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3828 AMP-dependent synthetase and ligase YP_001133651.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3827 short-chain dehydrogenase/reductase SDR YP_001133652.1 KEGG: mmc:Mmcs_3826 methylmalonyl-CoA mutase N-terminal domain protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_001133653.1 PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_3825 methylmalonyl-CoA mutase C-terminal domain protein YP_001133654.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein YP_001133655.1 KEGG: mmc:Mmcs_3823 L-carnitine dehydratase/bile acid-inducible protein F YP_001133656.1 KEGG: mmc:Mmcs_3822 ferredoxin YP_001133657.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3821 AMP-dependent synthetase and ligase YP_001133658.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3820 acyl-CoA dehydrogenase-like protein YP_001133659.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_4254 acyl-CoA dehydrogenase domain protein YP_001133660.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0683 hypothetical protein YP_001133661.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3798 short-chain dehydrogenase/reductase SDR YP_001133662.1 KEGG: mmc:Mmcs_3795 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase YP_001133663.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3789 fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_001133664.1 PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_3788 transcriptional regulator, IclR family YP_001133665.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3787 alpha/beta hydrolase fold YP_001133666.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate YP_001133667.1 catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family YP_001133668.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_001133669.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3783 luciferase-like protein YP_001133670.1 catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin. YP_001133671.1 KEGG: mmc:Mmcs_3781 hypothetical protein YP_001133672.1 PFAM: NADPH-dependent FMN reductase; KEGG: mmc:Mmcs_3780 NADPH-dependent FMN reductase YP_001133673.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_3779 type III restriction enzyme, res subunit YP_001133674.1 PFAM: restriction modification system DNA specificity domain; KEGG: fra:Francci3_4012 restriction modification system DNA specificity domain YP_001133675.1 KEGG: maq:Maqu_0232 hypothetical protein YP_001133676.1 KEGG: mmc:Mmcs_3774 hypothetical protein YP_001133677.1 PFAM: PilT protein domain protein; KEGG: mmc:Mmcs_3773 hypothetical protein YP_001133678.1 PFAM: N-6 DNA methylase; KEGG: mmc:Mmcs_3772 N-6 DNA methylase YP_001133679.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3771 alpha/beta hydrolase fold YP_001133680.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_4237 short-chain dehydrogenase/reductase SDR YP_001133681.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3769 transcriptional regulator, TetR family YP_001133682.1 KEGG: mmc:Mmcs_3768 putative ferredoxin YP_001133683.1 KEGG: mmc:Mmcs_3767 cytochrome P450 YP_001133684.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2 YP_001133685.1 PFAM: peptidase M24; KEGG: mmc:Mmcs_3765 peptidase M24 YP_001133686.1 KEGG: mmc:Mmcs_3764 peptidase M24 YP_001133687.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mva:Mvan_4230 enoyl-CoA hydratase/isomerase YP_001133688.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3762 L-carnitine dehydratase/bile acid-inducible protein F YP_001133689.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3761 short-chain dehydrogenase/reductase SDR YP_001133690.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_3760 NAD-dependent epimerase/dehydratase YP_001133691.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_3759 phospholipid/glycerol acyltransferase YP_001133692.1 activates fatty acids by binding to coenzyme A YP_001133693.1 PFAM: protein of unknown function UPF0089; KEGG: mva:Mvan_4224 protein of unknown function UPF0089 YP_001133694.1 PFAM: protein of unknown function DUF227; KEGG: mmc:Mmcs_3833 protein of unknown function DUF227 YP_001133695.1 KEGG: mmc:Mmcs_3756 short-chain dehydrogenase/reductase SDR YP_001133696.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3721 cytochrome P450 YP_001133697.1 KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family YP_001133698.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133699.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3752 acyl-CoA dehydrogenase-like protein YP_001133700.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mkm:Mkms_3824 acyl-CoA dehydrogenase domain protein YP_001133701.1 KEGG: mmc:Mmcs_3750 hypothetical protein YP_001133702.1 PFAM: amidohydrolase; KEGG: mmc:Mmcs_3749 amidohydrolase YP_001133703.1 KEGG: mmc:Mmcs_3748 hypothetical protein YP_001133704.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3747 Rieske (2Fe-2S) region YP_001133705.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3746 carboxymuconolactone decarboxylase YP_001133706.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein YP_001133707.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_4210 acyl-CoA dehydrogenase domain protein YP_001133708.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3742 L-carnitine dehydratase/bile acid-inducible protein F YP_001133709.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02289 possible enoyl-CoA hydratase YP_001133710.1 KEGG: mmc:Mmcs_3741 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase YP_001133711.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3740 acyl-CoA dehydrogenase-like protein YP_001133712.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3739 transcriptional regulator, TetR family YP_001133713.1 KEGG: mmc:Mmcs_3738 hypothetical protein YP_001133714.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_4202 alcohol dehydrogenase, zinc-binding domain protein YP_001133715.1 PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_3736 aminoglycoside phosphotransferase YP_001133716.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3735 acyl-CoA dehydrogenase-like protein YP_001133717.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3734 transcriptional regulator, TetR family YP_001133718.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein YP_001133719.1 KEGG: mmc:Mmcs_3730 hypothetical protein YP_001133720.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_3729 NAD-dependent epimerase/dehydratase YP_001133721.1 KEGG: mkm:Mkms_3792 conserved hypothetical protein YP_001133722.1 PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_3727 von Willebrand factor, type A YP_001133723.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_3726 ATPase associated with various cellular activities, AAA_5 YP_001133724.1 KEGG: mmc:Mmcs_3725 hypothetical protein YP_001133725.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_4194 transcriptional regulator, TetR family YP_001133726.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3703 transcriptional regulator, TetR family YP_001133727.1 KEGG: mva:Mvan_4192 conserved hypothetical protein YP_001133728.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0711c hypothetical protein YP_001133729.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3717 Rieske (2Fe-2S) region YP_001133730.1 KEGG: mmc:Mmcs_3716 hypothetical protein YP_001133731.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3715 amidohydrolase YP_001133732.1 PFAM: regulatory protein, MarR; LexA DNA-binding domain protein; KEGG: mva:Mvan_4187 transcriptional regulator, MarR family YP_001133733.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_3712 ferredoxin YP_001133734.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3711 short-chain dehydrogenase/reductase SDR YP_001133735.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_4184 Rieske (2Fe-2S) domain protein YP_001133736.1 KEGG: mmc:Mmcs_3709 hypothetical protein YP_001133737.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: mmc:Mmcs_3708 taurine catabolism dioxygenase TauD/TfdA YP_001133738.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3707 carboxymuconolactone decarboxylase YP_001133739.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3706 cytochrome P450 YP_001133740.1 PFAM: protein of unknown function DUF1330; KEGG: mmc:Mmcs_3704 protein of unknown function DUF1330 YP_001133741.1 KEGG: mva:Mvan_4177 esterase EstC, putative YP_001133742.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3698 cytochrome P450 YP_001133743.1 KEGG: mmc:Mmcs_3697 hypothetical protein YP_001133744.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3696 cytochrome P450 YP_001133745.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_3695 6-phosphogluconate dehydrogenase, NAD-binding protein YP_001133746.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mva:Mvan_4173 6-phosphogluconate dehydrogenase, NAD-binding YP_001133747.1 KEGG: mpa:MAP0732c hypothetical protein YP_001133748.1 PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35 YP_001133749.1 KEGG: mva:Mvan_4170 hypothetical protein YP_001133750.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mmc:Mmcs_3690 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit YP_001133751.1 KEGG: mmc:Mmcs_3689 hypothetical protein YP_001133752.1 KEGG: mmc:Mmcs_3688 hypothetical protein YP_001133753.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_4166 Rieske (2Fe-2S) domain protein YP_001133754.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2 YP_001133755.1 PFAM: amidohydrolase 2; KEGG: mva:Mvan_4164 amidohydrolase 2 YP_001133756.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3684 acyl-CoA dehydrogenase-like protein YP_001133757.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3683 acyl-CoA dehydrogenase-like protein YP_001133758.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_1898 luciferase-like protein YP_001133759.1 KEGG: mmc:Mmcs_1897 hypothetical protein YP_001133760.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mmc:Mmcs_1896 xylose isomerase-like TIM barrel YP_001133761.1 KEGG: mav:MAV_0063 hypothetical protein YP_001133762.1 KEGG: mmc:Mmcs_3681 hypothetical protein YP_001133763.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3680 cytochrome P450 YP_001133764.1 KEGG: mmc:Mmcs_3679 hypothetical protein YP_001133765.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3678 short-chain dehydrogenase/reductase SDR YP_001133766.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0754c hypothetical protein YP_001133767.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_3676 aldehyde dehydrogenase YP_001133768.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mva:Mvan_4155 L-carnitine dehydratase/bile acid-inducible protein F YP_001133769.1 PFAM: protein of unknown function DUF35; KEGG: mva:Mvan_4154 protein of unknown function DUF35 YP_001133770.1 PFAM: Thiolase; KEGG: fal:FRAAL3517 putative acetyl-CoA acetyltransferase YP_001133771.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_3673 protein of unknown function DUF140 YP_001133772.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_3672 protein of unknown function DUF140 YP_001133773.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3671 mammalian cell entry YP_001133774.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3670 mammalian cell entry YP_001133775.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3669 mammalian cell entry YP_001133776.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_4147 virulence factor Mce family protein YP_001133777.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3667 mammalian cell entry YP_001133778.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3666 mammalian cell entry YP_001133779.1 KEGG: mmc:Mmcs_3665 hypothetical protein YP_001133780.1 KEGG: mmc:Mmcs_3664 hypothetical protein YP_001133781.1 KEGG: mmc:Mmcs_0283 hypothetical protein YP_001133782.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3663 cytochrome P450 YP_001133783.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3662 transcriptional regulator, TetR family YP_001133784.1 KEGG: mmc:Mmcs_3660 thiolase YP_001133785.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein YP_001133786.1 KEGG: mva:Mvan_4137 conserved hypothetical protein YP_001133787.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3658 enoyl-CoA hydratase/isomerase YP_001133788.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_4135 AMP-dependent synthetase and ligase YP_001133789.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2 YP_001133790.1 activates fatty acids by binding to coenzyme A YP_001133791.1 KEGG: mmc:Mmcs_3654 hypothetical protein YP_001133792.1 KEGG: mmc:Mmcs_3653 twin-arginine translocation pathway signal YP_001133793.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: nfa:nfa4360 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001133794.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ace:Acel_1533 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001133795.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3651 major facilitator superfamily MFS_1 YP_001133796.1 PFAM: regulatory protein, MerR; KEGG: mva:Mvan_4126 putative transcriptional regulator, MerR family YP_001133797.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; domain of unknown function DUF1729; KEGG: mva:Mvan_4125 MaoC domain protein dehydratase YP_001133798.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001133799.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpa:MAP2330c hypothetical protein YP_001133800.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mmc:Mmcs_3644 redoxin YP_001133801.1 KEGG: mva:Mvan_4119 conserved hypothetical protein YP_001133802.1 KEGG: mmc:Mmcs_3437 hypothetical protein YP_001133803.1 PFAM: peptidase S15; KEGG: mva:Mvan_4077 peptidase S15 YP_001133804.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: rha:RHA1_ro00057 3-oxoacyl-[acyl-carrier-protein] synthase III YP_001133805.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mmc:Mmcs_3414 3-oxoacyl-(acyl-carrier protein) synthase YP_001133806.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3541 protein of unknown function UPF0089 YP_001133807.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_3641 ErfK/YbiS/YcfS/YnhG YP_001133808.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001133809.1 PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: mmc:Mmcs_3639 protein of unknown function DUF853, NPT hydrolase putative YP_001133810.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3638 short-chain dehydrogenase/reductase SDR YP_001133811.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3637 major facilitator superfamily MFS_1 YP_001133812.1 KEGG: mmc:Mmcs_3636 putative conserved proline rich membrane protein YP_001133813.1 PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: mmc:Mmcs_3635 peptidase S9, prolyl oligopeptidase active site region YP_001133814.1 KEGG: mpa:MAP0257 hypothetical protein YP_001133815.1 KEGG: mpa:MAP0258 hypothetical protein YP_001133816.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3632 transcriptional regulator, TetR family YP_001133817.1 PFAM: carboxyl transferase; KEGG: mva:Mvan_4091 propionyl-CoA carboxylase YP_001133818.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_3630 carbamoyl-phosphate synthase L chain, ATP-binding protein YP_001133819.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3629 acyl-CoA dehydrogenase-like protein YP_001133820.1 PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_3628 MaoC-like dehydratase YP_001133821.1 PFAM: HpcH/HpaI aldolase; KEGG: mva:Mvan_4087 HpcH/HpaI aldolase YP_001133822.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001133823.1 PFAM: acyl-ACP thioesterase; KEGG: mtc:MT2057 hypothetical protein YP_001133824.1 KEGG: mva:Mvan_4079 hypothetical protein YP_001133825.1 PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: fal:FRAAL1467 putative TetR family transcriptional regulatory protein YP_001133826.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP3537c BpoC_1 YP_001133827.1 KEGG: mbb:BCG_1327c hypothetical protein YP_001133828.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_3620 protein of unknown function UPF0089 YP_001133829.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_3619 HAD-superfamily subfamily IB, PSPase-like protein YP_001133830.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA YP_001133831.1 PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_3617 copper resistance D YP_001133832.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpa:MAP2296c single-strand DNA binding protein YP_001133833.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001133834.1 PFAM: NAD-glutamate dehydrogenase; KEGG: mmc:Mmcs_3614 NAD-glutamate dehydrogenase YP_001133835.1 KEGG: mmc:Mmcs_3613 hypothetical protein YP_001133836.1 KEGG: mva:Mvan_4067 conserved hypothetical protein YP_001133837.1 PFAM: globin; KEGG: mmc:Mmcs_3610 globin YP_001133838.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3609 HNH endonuclease YP_001133839.1 KEGG: mmc:Mmcs_3608 hypothetical protein YP_001133840.1 KEGG: mva:Mvan_4061 conserved hypothetical protein YP_001133841.1 SMART: HNH nuclease; KEGG: mmc:Mmcs_3606 HNH nuclease YP_001133842.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mmc:Mmcs_3605 peptidase M1, aminopeptidase N actinomycete-type YP_001133843.1 KEGG: mmc:Mmcs_3603 DsbA oxidoreductase YP_001133844.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mva:Mvan_4055 CMP/dCMP deaminase, zinc-binding YP_001133845.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mmc:Mmcs_3600 2OG-Fe(II) oxygenase YP_001133846.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity YP_001133847.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mbo:Mb2491c possible DNA glycosylase YP_001133848.1 PFAM: sodium/hydrogen exchanger; KEGG: mmc:Mmcs_3597 sodium/hydrogen exchanger YP_001133849.1 KEGG: mva:Mvan_4049 conserved hypothetical protein YP_001133850.1 KEGG: aor:AO090020000658 predicted protein Pfam: Lactamase_B YP_001133851.1 KEGG: mmc:Mmcs_4699 hypothetical protein YP_001133852.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001133853.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001133854.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001133855.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1592 hypothetical protein YP_001133856.1 binds and unfolds substrates as part of the ClpXP protease YP_001133857.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mva:Mvan_4034 glycosyltransferase, MGT family YP_001133858.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_001133859.1 KEGG: mmc:Mmcs_0718 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001133860.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: gbe:GbCGDNIH1_1930 transcriptional regulators, LysR family YP_001133861.1 PFAM: glutamine synthetase, catalytic region; KEGG: dde:Dde_0102 glutamine synthetase, type III YP_001133863.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: mva:Mvan_4020 inositol 2-dehydrogenase YP_001133864.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rha:RHA1_ro01353 probable acetolactate synthase YP_001133865.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rha:RHA1_ro01352 myo-inositol catabolism IolB protein YP_001133866.1 KEGG: rha:RHA1_ro01351 hypothetical protein YP_001133867.1 PFAM: PfkB domain protein; KEGG: mva:Mvan_4016 PfkB domain protein YP_001133868.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rha:RHA1_ro01349 transcriptional regulator, GntR family YP_001133869.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: psp:PSPPH_2335 AP endonuclease, family 2 superfamily YP_001133870.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rha:RHA1_ro01347 ABC sugar transporter, substrate-binding component YP_001133871.1 PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro01346 ABC sugar transporter, permease component YP_001133872.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro01345 ABC sugar transporter, ATP-binding component YP_001133873.1 KEGG: abo:ABO_0057 hypothetical protein YP_001133874.1 KEGG: abo:ABO_0056 hypothetical protein YP_001133875.1 KEGG: fal:FRAAL4043 hypothetical protein YP_001133876.1 PFAM: oxidoreductase domain protein; KEGG: hne:HNE_0812 oxidoreductase, NAD-binding YP_001133877.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mva:Mvan_3969 xylose isomerase domain protein TIM barrel YP_001133878.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sma:SAV7188 putative oxidoreductase YP_001133879.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: rha:RHA1_ro01364 hypothetical protein YP_001133880.1 SMART: regulatory protein, LacI; KEGG: rha:RHA1_ro01365 probable transcriptional regulator YP_001133881.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_3567 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein YP_001133882.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_001133883.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis YP_001133884.1 PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_3564 transglycosylase-like protein YP_001133885.1 PFAM: Transglycosylase domain protein; KEGG: mva:Mvan_3961 transglycosylase domain protein YP_001133886.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3561 monooxygenase, FAD-binding protein YP_001133887.1 KEGG: rha:RHA1_ro02823 hypothetical protein YP_001133888.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rha:RHA1_ro00470 phthalate 4,5-dioxygenase YP_001133889.1 KEGG: rha:RHA1_ro02825 hypothetical protein YP_001133890.1 KEGG: mva:Mvan_3956 hypothetical protein YP_001133891.1 PFAM: Rh family protein/ammonium transporter; KEGG: sil:SPO1578 ammonium transporter family protein YP_001133892.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: mmc:Mmcs_3560 peptidase S9, prolyl oligopeptidase active site region YP_001133893.1 PFAM: Saccharopine dehydrogenase; KEGG: mmc:Mmcs_3559 saccharopine dehydrogenase YP_001133894.1 KEGG: rha:RHA1_ro04870 hypothetical protein YP_001133895.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_001133896.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: mva:Mvan_3950 FolC bifunctional protein YP_001133897.1 KEGG: mmc:Mmcs_3556 hypothetical protein YP_001133898.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001133899.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family YP_001133900.1 PFAM: ribosomal protein L21; KEGG: mle:ML1467 50S ribosomal protein L21 YP_001133901.1 involved in the peptidyltransferase reaction during translation YP_001133902.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_001133903.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001133904.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2262 hypothetical protein YP_001133905.1 PFAM: cytochrome P450; KEGG: mpa:MAP2261c hypothetical protein YP_001133906.1 PFAM: Silent information regulator protein Sir2; KEGG: mmc:Mmcs_3545 silent information regulator protein Sir2 YP_001133907.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001133908.1 PFAM: PfkB domain protein; KEGG: mmc:Mmcs_3539 PfkB YP_001133909.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001133910.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mpa:MAP2246c hypothetical protein YP_001133911.1 PFAM: VWA containing CoxE family protein; KEGG: mmc:Mmcs_3536 VWA containing CoxE-like protein YP_001133913.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mva:Mvan_3931 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001133914.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3534 FAD dependent oxidoreductase YP_001133915.1 PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_3533 carbohydrate kinase, FGGY YP_001133916.1 PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_3532 amino acid permease-associated region YP_001133917.1 SMART: regulatory protein GntR, HTH; KEGG: mmc:Mmcs_3531 transcriptional regulator, GntR family YP_001133918.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria YP_001133919.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mmc:Mmcs_3529 iojap-related protein YP_001133920.1 PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3528 phosphoglycerate mutase YP_001133921.1 KEGG: mmc:Mmcs_3527 hypothetical protein YP_001133922.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: mmc:Mmcs_3526 DegV family protein YP_001133923.1 PFAM: dihydrodipicolinate reductase; KEGG: mmc:Mmcs_3522 dihydrodipicolinate reductase YP_001133924.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1435 hypothetical protein YP_001133925.1 PFAM: transposase, IS4 family protein; KEGG: cef:CE2553 insertion element conserved hypothetical protein YP_001133927.1 KEGG: mmc:Mmcs_3520 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1 YP_001133928.1 TIGRFAM: ComEC/Rec2-related protein; KEGG: mbo:Mb2437c hypothetical protein YP_001133929.1 PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit YP_001133930.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001133931.1 KEGG: mmc:Mmcs_3509 protein of unknown function DUF404 YP_001133932.1 PFAM: protein of unknown function DUF403; KEGG: mmc:Mmcs_3508 protein of unknown function DUF403 YP_001133933.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mmc:Mmcs_3507 transglutaminase-like protein YP_001133934.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_001133935.1 PFAM: CBS domain containing protein; KEGG: mmc:Mmcs_3505 putative signal-transduction protein with CBS domains YP_001133936.1 KEGG: mmc:Mmcs_3497 GCN5-related N-acetyltransferase YP_001133937.1 KEGG: mmc:Mmcs_3494 hypothetical protein YP_001133938.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001133939.1 KEGG: mmc:Mmcs_3492 LppR YP_001133940.1 KEGG: mmc:Mmcs_3491 hypothetical protein YP_001133941.1 PFAM: glycoside hydrolase 15-related; KEGG: mmc:Mmcs_3484 glycoside hydrolase 15-related YP_001133942.1 KEGG: mle:ML0614 hypothetical protein YP_001133943.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_3482 thiosulphate-binding protein YP_001133944.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb2421c probable sulfate-transport integral membrane protein ABC transporter CysT YP_001133945.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3873 sulfate ABC transporter, inner membrane subunit CysW YP_001133946.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; SMART: AAA ATPase; KEGG: mmc:Mmcs_3479 sulphate transport system permease protein 1 YP_001133947.1 KEGG: mmc:Mmcs_3478 protein of unknown function DUF21 YP_001133948.1 SMART: CBS domain containing protein; KEGG: mmc:Mmcs_3477 protein of unknown function DUF21 YP_001133949.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mmc:Mmcs_3476 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001133950.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_001133951.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mmc:Mmcs_3474 ferredoxin--nitrite reductase YP_001133952.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001133953.1 KEGG: mpa:MAP0792c hypothetical protein YP_001133955.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_3472 beta-ketoacyl synthase YP_001133956.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_3850 AMP-dependent synthetase and ligase YP_001133957.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: mmc:Mmcs_3470 amino acid adenylation YP_001133958.1 PFAM: Thioesterase; KEGG: mbo:Mb2404c phenyloxazoline synthase MbtB (phenyloxazoline synthetase) YP_001133959.1 KEGG: mmc:Mmcs_3468 beta-ketoacyl synthase YP_001133960.1 KEGG: mmc:Mmcs_3467 acyl transferase region YP_001133961.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_3466 amino acid adenylation YP_001133962.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_3465 amino acid adenylation YP_001133963.1 KEGG: mmc:Mmcs_3464 FAD dependent oxidoreductase YP_001133964.1 KEGG: mmc:Mmcs_3463 MbtH-like protein YP_001133965.1 KEGG: mbo:Mb2396 hypothetical protein YP_001133966.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001133967.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001133968.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001133969.1 PFAM: membrane family protein; KEGG: mpa:MAP1241c MmpS4 YP_001133970.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mle:ML2378 conserved large membrane protein YP_001133971.1 PFAM: PhoH family protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmc:Mmcs_3456 PhoH-like protein YP_001133972.1 PFAM: protein of unknown function UPF0054; KEGG: mmc:Mmcs_3455 protein of unknown function UPF0054 YP_001133973.1 SMART: CBS domain containing protein; KEGG: mva:Mvan_3830 CBS domain containing protein YP_001133974.1 KEGG: mbo:Mb2386c hypothetical protein YP_001133975.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_001133976.1 KEGG: mtc:MT2026 hypothetical protein YP_001133977.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001133978.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_001133979.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: mmc:Mmcs_3449 undecaprenyl diphosphate synthase YP_001133980.1 KEGG: mva:Mvan_3821 conserved hypothetical protein YP_001133982.1 KEGG: mbo:Mb2380 probable ferric uptake regulation protein FurB YP_001133983.1 SMART: regulatory protein, ArsR; KEGG: mmc:Mmcs_3446 transcriptional regulator, ArsR family YP_001133984.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001133985.1 KEGG: mmc:Mmcs_3444 protein of unknown function DUF477 YP_001133986.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001133987.1 synthesizes RNA primers at the replication forks YP_001133988.1 KEGG: mmc:Mmcs_3441 hypothetical protein YP_001133989.1 KEGG: mmc:Mmcs_3440 hypothetical protein YP_001133990.1 KEGG: mmc:Mmcs_3436 LppP YP_001133991.1 PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_3808 acyl-CoA dehydrogenase domain protein YP_001133992.1 KEGG: mmc:Mmcs_3434 protein of unknown function DUF125, transmembrane YP_001133993.1 KEGG: mmc:Mmcs_3433 major facilitator superfamily MFS_1 YP_001133994.1 SMART: regulatory protein, MarR; KEGG: mbo:Mb2354 hypothetical protein YP_001133995.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_3806 ABC transporter-related protein YP_001133996.1 KEGG: mmc:Mmcs_3430 cobalt transport protein YP_001133997.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mmc:Mmcs_3429 peptidase U62, modulator of DNA gyrase YP_001133998.1 KEGG: mmc:Mmcs_3428 hypothetical protein YP_001133999.1 KEGG: mmc:Mmcs_3427 hypothetical protein YP_001134002.1 KEGG: mva:Mvan_3800 hypothetical protein YP_001134003.1 KEGG: mmc:Mmcs_3421 hypothetical protein YP_001134004.1 KEGG: mmc:Mmcs_0260 hypothetical protein YP_001134005.1 TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_1615 diguanylate cyclase/phosphodiesterase YP_001134006.1 KEGG: mkm:Mkms_0872 uncharacterized protein UPF0065 YP_001134007.1 SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: sma:SAV922 magnesium or manganese-dependent protein phosphatase YP_001134009.1 KEGG: mmc:Mmcs_0847 MscS mechanosensitive ion channel YP_001134010.1 PFAM: protein of unknown function DUF427; KEGG: mmc:Mmcs_2990 protein of unknown function DUF427 YP_001134011.1 TIGRFAM: amino acid/peptide transporter; KEGG: nfa:nfa48510 putative oligopeptide transporter YP_001134012.1 KEGG: mmc:Mmcs_2209 hypothetical protein YP_001134013.1 KEGG: gka:GK2838 putative neutral protease YP_001134014.1 KEGG: mva:Mvan_3788 alpha/beta hydrolase fold YP_001134015.1 KEGG: rha:RHA1_ro03338 probable branched-chain amino acid transporter YP_001134016.1 PFAM: branched-chain amino acid transport; KEGG: rha:RHA1_ro03339 probable branched chain amino acid transport protein YP_001134017.1 KEGG: mpa:MAP2883 hypothetical protein YP_001134018.1 KEGG: mmc:Mmcs_3569 Rieske (2Fe-2S) region YP_001134019.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2881c hypothetical protein YP_001134021.1 SMART: HNH nuclease; KEGG: mtc:MT3885 hypothetical protein YP_001134022.1 KEGG: mmc:Mmcs_3395 short-chain dehydrogenase/reductase SDR YP_001134023.1 SMART: AAA ATPase; KEGG: mmc:Mmcs_3394 ABC transporter related YP_001134024.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3393 binding-protein-dependent transport systems inner membrane component YP_001134025.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3392 binding-protein-dependent transport systems inner membrane component YP_001134026.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_3391 extracellular solute-binding protein, family 5 YP_001134027.1 KEGG: mmc:Mmcs_3390 hypothetical protein YP_001134028.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2013c hypothetical protein YP_001134029.1 KEGG: mmc:Mmcs_3382 hypothetical protein YP_001134030.1 PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_3381 beta-lactamase-like protein YP_001134031.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3380 alcohol dehydrogenase, zinc-binding protein YP_001134032.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: rha:RHA1_ro01018 hypothetical protein YP_001134033.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_3378 methyltransferase type 11 YP_001134034.1 PFAM: beta-lactamase; KEGG: mmc:Mmcs_3377 beta-lactamase YP_001134035.1 KEGG: mmc:Mmcs_3376 hypothetical protein YP_001134036.1 involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids YP_001134037.1 PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_3761 alkylglycerone-phosphate synthase YP_001134038.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3373 transcriptional regulator, TetR family YP_001134039.1 PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3372 FAD dependent oxidoreductase YP_001134040.1 PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3368 propionyl-CoA carboxylase YP_001134041.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001134042.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001134043.1 carries the fatty acid chain in fatty acid biosynthesis YP_001134044.1 KEGG: mmc:Mmcs_3364 (acyl-carrier protein) S-malonyltransferase YP_001134045.1 KEGG: mmc:Mmcs_3363 hypothetical protein YP_001134046.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001134047.1 KEGG: mmc:Mmcs_3361 hypothetical protein YP_001134048.1 KEGG: mmc:Mmcs_3360 hypothetical protein YP_001134049.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpa:MAP1991c AhpE YP_001134051.1 PFAM: phage integrase family protein; KEGG: sco:SCO3250 integrase YP_001134052.1 KEGG: mmc:Mmcs_1423 hypothetical protein YP_001134053.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5602 putative transposase for insertion element IS6110 (second part) YP_001134054.1 KEGG: mmc:Mmcs_1426 hypothetical protein YP_001134055.1 KEGG: mmc:Mmcs_1428 hypothetical protein YP_001134057.1 KEGG: mmc:Mmcs_1430 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein YP_001134058.1 KEGG: mva:Mvan_3733 conserved hypothetical protein YP_001134061.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: nfa:nfa53560 putative DNA-binding protein YP_001134062.1 KEGG: mkm:Mkms_5601 hypothetical protein YP_001134063.1 KEGG: mmc:Mmcs_5111 hypothetical protein YP_001134064.1 KEGG: mmc:Mmcs_5112 hypothetical protein YP_001134065.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5604 ErfK/YbiS/YcfS/YnhG family protein YP_001134066.1 KEGG: tfu:Tfu_2255 hypothetical protein YP_001134067.1 PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase YP_001134068.1 KEGG: mmc:Mmcs_4754 hypothetical protein YP_001134069.1 KEGG: mmc:Mmcs_4241 putative conserved lipoprotein LpqU YP_001134071.1 PFAM: Abortive infection protein; KEGG: mmc:Mmcs_5036 abortive infection protein YP_001134072.1 PFAM: copper resistance protein CopC; KEGG: nfa:pnf1510 putative copper resistance protein YP_001134073.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1435 NLP/P60 YP_001134074.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mva:Mvan_3712 cytochrome c oxidase, subunit III YP_001134077.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mmc:Mmcs_0692 redoxin YP_001134078.1 KEGG: mkm:Mkms_5665 putative membrane protein YP_001134079.1 KEGG: rha:RHA1_ro11207 hypothetical protein YP_001134080.1 PFAM: peptidase M48, Ste24p; KEGG: mva:Mvan_3707 peptidase M48, Ste24p YP_001134081.1 KEGG: mmc:Mmcs_1441 transcriptional repressor, CopY family YP_001134082.1 PFAM: peptidase M23B; KEGG: mpa:MAP0895c hypothetical protein YP_001134083.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mmc:Mmcs_1852 cytochrome-c oxidase YP_001134085.1 PFAM: cytochrome c assembly protein; KEGG: mva:Mvan_3702 cytochrome c assembly protein YP_001134086.1 PFAM: acyltransferase 3; KEGG: mbo:Mb1592c hypothetical protein YP_001134087.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sal:Sala_2582 heavy metal translocating P-type ATPase YP_001134088.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rle:pRL110332 hypothetical protein YP_001134089.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmc:Mmcs_0151 ErfK/YbiS/YcfS/YnhG YP_001134090.1 KEGG: mmc:Mmcs_0693 cytochrome c biogenesis protein, transmembrane region YP_001134091.1 PFAM: copper resistance D domain protein; KEGG: mva:Mvan_3692 copper resistance D domain protein YP_001134093.1 PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase YP_001134094.1 KEGG: mes:Meso_4425 hypothetical protein YP_001134095.1 KEGG: mmc:Mmcs_1470 hypothetical protein YP_001134096.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1469 heavy metal translocating P-type ATPase YP_001134097.1 PFAM: regulatory protein, ArsR; KEGG: ttj:TTHA0705 transcriptional repressor SmtB YP_001134098.1 KEGG: nfa:nfa25430 hypothetical protein YP_001134099.1 KEGG: nfa:pnf1430 hypothetical protein YP_001134100.1 KEGG: mva:Mvan_3236 putative alkylmercury lyase YP_001134101.1 PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_1437 protein of unknown function DUF305 YP_001134102.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_1438 periplasmic sensor signal transduction histidine kinase YP_001134103.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mkm:Mkms_1457 two component transcriptional regulator, winged helix family YP_001134104.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1440 NLP/P60 YP_001134105.1 PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_1441 transcriptional repressor, CopY family YP_001134106.1 PFAM: peptidase M48, Ste24p; KEGG: mmc:Mmcs_1442 hypothetical protein YP_001134107.1 PFAM: transcriptional regulator domain protein; KEGG: mmc:Mmcs_1446 response regulator receiver protein YP_001134108.1 PFAM: NLP/P60 protein; KEGG: mva:Mvan_3652 NLP/P60 protein YP_001134109.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mva:Mvan_3651 ErfK/YbiS/YcfS/YnhG family protein YP_001134110.1 KEGG: mmc:Mmcs_1448 ErfK/YbiS/YcfS/YnhG YP_001134111.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1449 alpha/beta hydrolase fold YP_001134112.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mmc:Mmcs_1450 heavy metal transport/detoxification protein YP_001134113.1 KEGG: mmc:Mmcs_1451 hypothetical protein YP_001134114.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1452 heavy metal translocating P-type ATPase YP_001134115.1 PFAM: YHS domain protein; KEGG: mkm:Mkms_1471 YHS domain protein YP_001134116.1 PFAM: protein of unknown function DUF156; KEGG: mmc:Mmcs_1454 protein of unknown function DUF156 YP_001134117.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_5319 ATPase, P type cation/copper-transporter YP_001134118.1 KEGG: mkm:Mkms_5723 conserved hypothetical protein YP_001134119.1 KEGG: mmc:Mmcs_1471 hypothetical protein YP_001134120.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: mmc:Mmcs_1979 AMP-dependent synthetase and ligase YP_001134121.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_1980 ABC transporter related YP_001134122.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_1981 binding-protein-dependent transport systems inner membrane component YP_001134123.1 PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_1982 extracellular solute-binding protein, family 1 YP_001134124.1 KEGG: stt:t3414 hypothetical protein YP_001134125.1 KEGG: stt:t3415 hypothetical protein YP_001134126.1 KEGG: mmc:Mmcs_1470 hypothetical protein YP_001134127.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_2345 methyltransferase type 11 YP_001134128.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmc:Mmcs_2502 apolipoprotein N-acyltransferase YP_001134129.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nfa:pnf1445 hypothetical protein YP_001134130.1 PFAM: regulatory protein, ArsR; KEGG: mva:Mvan_3640 regulatory protein, ArsR YP_001134131.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mbo:Mb2015c probable metal cation transporter P-type ATPase G CtpG YP_001134132.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001134133.1 PFAM: cadmium resistance transporter; KEGG: cgb:cg1033 cadmium resistance transporter YP_001134134.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nfa:nfa51580 putative cytochrome c biogenesis protein YP_001134135.1 KEGG: mva:Mvan_3232 conserved hypothetical protein YP_001134136.1 KEGG: nfa:pnf1300 hypothetical protein YP_001134137.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1447 NLP/P60 YP_001134138.1 KEGG: art:Arth_0710 hypothetical protein YP_001134139.1 KEGG: art:Arth_0711 hypothetical protein YP_001134140.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sma:SAV7546 transposase YP_001134141.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11272 transposase YP_001134142.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_3894 integrase, catalytic region YP_001134143.1 PFAM: TatD-related deoxyribonuclease; KEGG: atc:AGR_pAT_25 putative Mg-dependent DNase YP_001134144.1 KEGG: dar:Daro_2209 hypothetical protein YP_001134146.1 PFAM: KAP P-loop domain protein; KEGG: rme:Rmet_1472 kap P-loop YP_001134148.1 KEGG: pca:Pcar_2558 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001134149.1 PFAM: SOUL heme-binding protein; KEGG: mmc:Mmcs_2896 SOUL heme-binding protein YP_001134150.1 PFAM: Amidohydrolase 3; KEGG: mva:Mvan_3625 amidohydrolase 3 YP_001134151.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_001134152.1 KEGG: mmc:Mmcs_3348 putative conserved transmembrane protein YP_001134153.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_3347 protein tyrosine phosphatase YP_001134154.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_3346 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001134155.1 PFAM: protein of unknown function DUF34; KEGG: mpa:MAP1982c hypothetical protein YP_001134156.1 PFAM: protein of unknown function DUF164; KEGG: mpa:MAP1981c hypothetical protein YP_001134157.1 PFAM: ribonuclease H; Phosphoglycerate mutase; KEGG: mmc:Mmcs_3342 phosphoglycerate mutase YP_001134158.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: mva:Mvan_3617 transcriptional regulator, XRE family YP_001134159.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3340 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001134160.1 PFAM: Tellurite resistance protein TehB; methyltransferase small; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP1977c hypothetical protein YP_001134161.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001134162.1 SMART: HNH nuclease; KEGG: mmc:Mmcs_4699 hypothetical protein YP_001134163.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_3336 lyase YP_001134164.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_3335 transcriptional regulator, AraC family YP_001134165.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mmc:Mmcs_3334 CHAD domain containing protein YP_001134166.1 activates fatty acids by binding to coenzyme A YP_001134167.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3333 enoyl-CoA hydratase/isomerase YP_001134168.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001134169.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mva:Mvan_3600 TAP domain protein YP_001134170.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rru:Rru_A3458 GCN5-related N-acetyltransferase YP_001134171.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mmc:Mmcs_3329 TAP-like protein YP_001134172.1 PFAM: acyl-CoA thioesterase; KEGG: rfr:Rfer_0997 palmitoyl-CoA hydrolase YP_001134173.1 KEGG: mmc:Mmcs_3733 hypothetical protein YP_001134174.1 KEGG: mmc:Mmcs_3328 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp YP_001134175.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_001134176.1 PFAM: thioesterase superfamily protein; KEGG: mpa:MAP1964c hypothetical protein YP_001134177.1 PFAM: luciferase family protein; KEGG: mpa:MAP1963c hypothetical protein YP_001134178.1 KEGG: mva:Mvan_3594 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: putative outer membrane adhesin like protein; 40-residue YVTN family beta-propeller repeat protein; PFAM: SMP-30/Gluconolaconase/LRE domain protein; SMART: WD-40 repeat protein YP_001134179.1 PFAM: DoxX family protein; KEGG: mmc:Mmcs_3322 DoxX YP_001134181.1 PFAM: HNH endonuclease; KEGG: nfa:nfa370 hypothetical protein YP_001134182.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: nfa:nfa2550 putative phage head YP_001134190.1 KEGG: mmc:Mmcs_4829 hypothetical protein YP_001134191.1 PFAM: helix-turn-helix domain protein YP_001134192.1 PFAM: phage integrase family protein; KEGG: mav:MAV_2266 phage-related integrase YP_001134193.1 KEGG: mmc:Mmcs_3320 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp YP_001134194.1 PFAM: RDD domain containing protein; KEGG: mmc:Mmcs_3319 RDD domain containing protein YP_001134195.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3318 twin-arginine translocation pathway signal YP_001134196.1 KEGG: mmc:Mmcs_3317 hypothetical protein YP_001134197.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001134198.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_001134199.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; domain of unknown function DUF1731; KEGG: mmc:Mmcs_3314 hypothetical protein YP_001134200.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: cjk:jk0707 dihydrolipoamide succinyltransferase YP_001134201.1 KEGG: mva:Mvan_3578 conserved hypothetical protein YP_001134202.1 PFAM: alpha/beta hydrolase fold; short-chain dehydrogenase/reductase SDR; KR; KEGG: mbo:Mb2237c short chain dehydrogenase YP_001134203.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_001134204.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_001134205.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001134206.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole YP_001134207.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_001134208.1 KEGG: mmc:Mmcs_3303 hypothetical protein YP_001134209.1 PFAM: glycerate kinase; KEGG: mva:Mvan_3569 glycerate kinase YP_001134210.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mmc:Mmcs_3302 HesB/YadR/YfhF YP_001134211.1 KEGG: mmc:Mmcs_3301 putative conserved membrane protein YP_001134212.1 PFAM: PfkB domain protein; KEGG: mmc:Mmcs_3300 adenosine kinase YP_001134213.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: mpa:MAP1941 asparagine synthetase YP_001134214.1 PFAM: cytochrome c oxidase, subunit II; KEGG: mbo:Mb2223c probable transmembrane cytochrome C oxidase (subunit II) CtaC YP_001134215.1 KEGG: mva:Mvan_3563 putative conserved integral membrane protein YP_001134216.1 KEGG: mle:ML0877 hypothetical protein YP_001134217.1 KEGG: mmc:Mmcs_3295 hypothetical protein YP_001134218.1 PFAM: Cytochrome b/b6, N-terminal domain; KEGG: mva:Mvan_3560 cytochrome b/b6, N-terminal domain YP_001134219.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_3559 Rieske (2Fe-2S) domain protein YP_001134220.1 PFAM: cytochrome c, class I; KEGG: mmc:Mmcs_3292 cytochrome c, class I YP_001134221.1 PFAM: cytochrome c oxidase, subunit III; KEGG: rha:RHA1_ro01130 cytochrome c oxidase YP_001134222.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001134223.1 contains 3'-5'exonuclease domain YP_001134224.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_3287 NLP/P60 YP_001134225.1 KEGG: mmc:Mmcs_3286 hypothetical protein YP_001134226.1 PFAM: glycosyl transferase, group 1; KEGG: mva:Mvan_3550 glycosyl transferase, group 1 YP_001134227.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3282 AMP-dependent synthetase and ligase YP_001134228.1 KEGG: mpa:MAP1924c hypothetical protein YP_001134229.1 PFAM: cyclase/dehydrase; KEGG: mmc:Mmcs_3280 cyclase/dehydrase YP_001134230.1 PFAM: Anion-transporting ATPase; KEGG: mmc:Mmcs_3279 arsenite-transporting ATPase YP_001134231.1 KEGG: mmc:Mmcs_3278 hypothetical protein YP_001134232.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1920c putative 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001134233.1 KEGG: mva:Mvan_3543 putative conserved integral membrane protein YP_001134234.1 KEGG: mmc:Mmcs_3275 hypothetical protein YP_001134235.1 KEGG: mmc:Mmcs_3274 hypothetical protein YP_001134236.1 KEGG: mmc:Mmcs_3273 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II YP_001134237.1 PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_3272 serine/threonine protein kinase YP_001134238.1 KEGG: mpa:MAP1913c hypothetical protein YP_001134239.1 KEGG: mmc:Mmcs_3270 hypothetical protein YP_001134240.1 PFAM: Polyprenyl synthetase; KEGG: mva:Mvan_3536 polyprenyl synthetase YP_001134241.1 KEGG: mmc:Mmcs_3268 LppM YP_001134242.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_3267 hypothetical protein YP_001134243.1 KEGG: mmc:Mmcs_3266 putative conserved transmembrane protein YP_001134244.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_001134245.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mva:Mvan_3531 S-adenosyl-methyltransferase MraW YP_001134246.1 KEGG: mmc:Mmcs_3263 FHA domain containing protein YP_001134247.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: mva:Mvan_3529 peptidoglycan glycosyltransferase YP_001134248.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_001134249.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: mmc:Mmcs_3260 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001134250.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001134251.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001134252.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mmc:Mmcs_3257 cell division protein FtsW YP_001134253.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001134254.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001134255.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: mmc:Mmcs_3254 polypeptide-transport-associated, FtsQ-type YP_001134256.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_001134257.1 PFAM: protein of unknown function DUF152; KEGG: mmc:Mmcs_3252 protein of unknown function DUF152 YP_001134258.1 PFAM: alanine racemase domain protein; KEGG: mmc:Mmcs_3251 protein of unknown function UPF0001 YP_001134259.1 PFAM: protein of unknown function DUF552; KEGG: mva:Mvan_3517 protein of unknown function DUF552 YP_001134260.1 KEGG: mmc:Mmcs_3249 hypothetical protein YP_001134261.1 PFAM: DivIVA family protein; KEGG: mmc:Mmcs_3248 DivIVA YP_001134262.1 KEGG: mpa:MAP1888c hypothetical protein YP_001134263.1 PFAM: phosphoribosyltransferase; KEGG: mmc:Mmcs_3246 phosphoribosyltransferase YP_001134264.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; domain of unknown function DUF1731; KEGG: mmc:Mmcs_3245 hypothetical protein YP_001134265.1 PFAM: glutamine amidotransferase class-I; KEGG: mva:Mvan_3511 glutamine amidotransferase class-I YP_001134266.1 cellulase; PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; Na-Ca exchanger/integrin-beta4; KEGG: ace:Acel_0614 glycoside hydrolase, family 5 YP_001134267.1 PFAM: response regulator receiver; KEGG: mmc:Mmcs_3239 response regulator receiver and unknown domain protein YP_001134268.1 PFAM: ATP-binding region, ATPase domain protein; KEGG: mmc:Mmcs_3238 signal transduction histidine kinase regulating citrate/malate metabolism YP_001134269.1 PFAM: Uncharacterized protein UPF0065; KEGG: rha:RHA1_ro06623 hypothetical protein YP_001134270.1 KEGG: mmc:Mmcs_3236 integral membrane protein YP_001134271.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: mmc:Mmcs_3235 protein of unknown function DUF112, transmembrane YP_001134272.1 PFAM: UspA domain protein; KEGG: mva:Mvan_3499 UspA domain protein YP_001134273.1 KEGG: sco:SCO7777 hydrolase YP_001134274.1 KEGG: mmc:Mmcs_3555 hypothetical protein YP_001134275.1 KEGG: mva:Mvan_3497 conserved hypothetical protein YP_001134276.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_3496 transcriptional regulator, TetR family YP_001134277.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3232 Rieske (2Fe-2S) region YP_001134278.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3231 nitrite reductase (NAD(P)H) large subunit, NirB YP_001134279.1 KEGG: mmc:Mmcs_3230 hypothetical protein YP_001134280.1 KEGG: rha:RHA1_ro06365 nitrite extrusion protein YP_001134281.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mva:Mvan_3491 molybdopterin oxidoreductase YP_001134282.1 KEGG: mpa:MAP1753 hypothetical protein YP_001134283.1 KEGG: mbo:Mb3206c hypothetical alanine rich protein YP_001134284.1 TIGRFAM: prevent-host-death family protein; KEGG: mbo:Mb3207c hypothetical protein YP_001134286.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb1581 possible regulatory protein YP_001134288.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3461c possible transposase YP_001134289.1 PFAM: regulatory protein, LacI; regulatory protein, TetR; KEGG: mmc:Mmcs_3223 transcriptional regulator, TetR family YP_001134290.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_3222 phenylacetic acid degradation-related protein YP_001134291.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3221 alpha/beta hydrolase fold YP_001134293.1 PFAM: membrane family protein; KEGG: mbo:Mb0696c possible conserved membrane protein MmpS5 YP_001134294.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mpa:MAP1738 MmpL5 YP_001134295.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: mmc:Mmcs_5596 metal dependent phosphohydrolase YP_001134296.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_5595 NUDIX hydrolase YP_001134297.1 SMART: helix-turn-helix domain protein; KEGG: mmc:Mmcs_3169 hypothetical protein YP_001134298.1 KEGG: mmc:Mmcs_3168 regulatory protein YP_001134299.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mmc:Mmcs_3167 cell division FtsK/SpoIIIE YP_001134300.1 KEGG: mmc:Mmcs_3166 putative plasmid replication initiator protein YP_001134301.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: mmc:Mmcs_3165 recombinase YP_001134302.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mmc:Mmcs_3164 peptidase M20 YP_001134303.1 PFAM: PEBP family protein; KEGG: mva:Mvan_3488 PEBP family protein YP_001134304.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001134305.1 KEGG: mmc:Mmcs_3161 hypothetical protein YP_001134306.1 KEGG: mmc:Mmcs_3160 lipoprotein, putative YP_001134307.1 KEGG: mmc:Mmcs_3159 hypothetical protein YP_001134308.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001134309.1 PFAM: Phosphoglycerate mutase; KEGG: mmc:Mmcs_3157 phosphoglycerate mutase YP_001134310.1 KEGG: mmc:Mmcs_3156 hypothetical protein YP_001134311.1 KEGG: mva:Mvan_3480 phosphatidylinositol 3- and 4-kinase, catalytic YP_001134312.1 PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_3154 inositol monophosphatase YP_001134313.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro10192 possible transposase YP_001134314.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001134315.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3152 short-chain dehydrogenase/reductase SDR YP_001134316.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: mva:Mvan_3476 protein of unknown function DUF1214 YP_001134317.1 PFAM: protein of unknown function DUF75; KEGG: mmc:Mmcs_3150 protein of unknown function DUF75 YP_001134318.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_001134319.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_3148 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001134320.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3147 sugar transporter YP_001134321.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_001134322.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_001134323.1 PFAM: 17 kDa surface antigen; KEGG: mmc:Mmcs_3143 putative conserved integral membrane protein YP_001134324.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_001134325.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_3467 transcriptional regulator, TetR family YP_001134326.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001134327.1 KEGG: mmc:Mmcs_3139 hypothetical protein YP_001134328.1 KEGG: mmc:Mmcs_3138 hypothetical protein YP_001134329.1 KEGG: mmc:Mmcs_3137 putative RecB family exonuclease YP_001134330.1 KEGG: mva:Mvan_3462 tRNA (adenine-N(1)-)-methyltransferase YP_001134331.1 PFAM: protein of unknown function DUF503; KEGG: mmc:Mmcs_3135 protein of unknown function DUF503 YP_001134332.1 KEGG: mbo:Mb2140 probable conserved lipoprotein LppK YP_001134333.1 KEGG: mmc:Mmcs_3133 low molecular weight antigen CFP2 (low molecular weight protein antigen 2) (CFP-2) YP_001134334.1 KEGG: mbo:Mb2139c probable ATPase; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase YP_001134335.1 KEGG: mmc:Mmcs_0950 hypothetical protein YP_001134336.1 KEGG: mva:Mvan_3455 conserved hypothetical protein YP_001134337.1 KEGG: mtc:MT2173 hypothetical protein YP_001134338.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mva:Mvan_3453 transcriptional regulator, BadM/Rrf2 family YP_001134339.1 KEGG: mtc:MT2173 hypothetical protein YP_001134340.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: mmc:Mmcs_3131 protein of unknown function DUF245-like protein YP_001134341.1 PFAM: protein of unknown function DUF797; KEGG: mbo:Mb2135c hypothetical protein YP_001134342.1 PFAM: 20S proteasome, A and B subunits; KEGG: mva:Mvan_3449 20S proteasome, A and B subunits YP_001134343.1 PFAM: 20S proteasome, A and B subunits; KEGG: mmc:Mmcs_3129 20S proteasome, A and B subunits YP_001134345.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: mmc:Mmcs_2459 FAD dependent oxidoreductase YP_001134346.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids YP_001134347.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mkm:Mkms_2506 Rieske (2Fe-2S) domain protein YP_001134348.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2462 betaine-aldehyde dehydrogenase YP_001134349.1 PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_2463 amino acid permease-associated region YP_001134350.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_2464 glucose-methanol-choline oxidoreductase YP_001134351.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: mmc:Mmcs_2465 cyclic nucleotide-binding protein YP_001134352.1 PFAM: transcriptional regulator TrmB; regulatory proteins, IclR; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_2466 transcriptional regulator, IclR family YP_001134353.1 PFAM: protein of unknown function DUF1023; KEGG: sma:SAV4579 hypothetical protein YP_001134354.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: mva:Mvan_3445 protein of unknown function DUF245 domain protein YP_001134355.1 PFAM: MCP methyltransferase, CheR-type; Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_2000 hypothetical protein YP_001134356.1 KEGG: mmc:Mmcs_2472 hypothetical protein YP_001134357.1 KEGG: mmc:Mmcs_2473 transcriptional regulator-like protein YP_001134358.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001134359.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mmc:Mmcs_2475 sec-independent protein translocase TatC YP_001134360.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DSH domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_2476 DEAD/DEAH box helicase-like protein YP_001134361.1 KEGG: mva:Mvan_3439 conserved hypothetical protein YP_001134362.1 PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; KEGG: mmc:Mmcs_2478 5'-3' exonuclease YP_001134363.1 PFAM: creatinase; peptidase M24; KEGG: mva:Mvan_3437 peptidase M24 YP_001134364.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1820 hypothetical protein YP_001134365.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2482 short-chain dehydrogenase/reductase SDR YP_001134366.1 KEGG: mmc:Mmcs_2483 precorrin-6y C5,15-methyltransferase, subunit CbiE; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001134367.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase YP_001134368.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1753 transcriptional regulator, TetR family YP_001134369.1 KEGG: mmc:Mmcs_2487 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001134370.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate YP_001134371.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; KEGG: mmc:Mmcs_2489 precorrin-3B synthase YP_001134372.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: mmc:Mmcs_2491 taurine dioxygenase YP_001134373.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2492 binding-protein-dependent transport systems inner membrane component YP_001134374.1 KEGG: mmc:Mmcs_2493 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001134375.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2539 binding-protein-dependent transport systems inner membrane component YP_001134376.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mmc:Mmcs_2495 substrate-binding region of ABC-type glycine betaine transport system YP_001134377.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_001134378.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_2497 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_001134379.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_2498 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein YP_001134380.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein YP_001134381.1 PFAM: Amidohydrolase 3; KEGG: mva:Mvan_3420 amidohydrolase 3 YP_001134382.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmc:Mmcs_2502 apolipoprotein N-acyltransferase YP_001134383.1 PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_2503 dolichyl-phosphate beta-D-mannosyltransferase YP_001134384.1 KEGG: mmc:Mmcs_2504 hypothetical protein YP_001134385.1 KEGG: mmc:Mmcs_2505 hypothetical protein YP_001134386.1 PFAM: alpha/beta hydrolase fold; transcriptional regulator domain protein; KEGG: mmc:Mmcs_2507 transcriptional regulator, CadC YP_001134387.1 KEGG: mmc:Mmcs_2508 hypothetical protein YP_001134388.1 KEGG: mmc:Mmcs_2509 hypothetical protein YP_001134389.1 KEGG: mtc:MT2106 hypothetical protein YP_001134390.1 PFAM: Carboxylesterase, type B; KEGG: mva:Mvan_3408 carboxylesterase, type B YP_001134391.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_001134392.1 PFAM: protein of unknown function UPF0060; KEGG: mmc:Mmcs_2513 protein of unknown function UPF0060 YP_001134393.1 KEGG: mmc:Mmcs_2515 hypothetical protein YP_001134394.1 KEGG: mbo:Mb3059 hypothetical protein YP_001134395.1 PFAM: DoxX family protein; KEGG: mmc:Mmcs_2517 DoxX YP_001134396.1 PFAM: beta-lactamase domain protein; KEGG: mbo:Mb1948 hypothetical protein YP_001134397.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP3925 EchA8_2 YP_001134398.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mva:Mvan_3392 protein of unknown function DUF6, transmembrane YP_001134399.1 KEGG: nfa:nfa34980 hypothetical protein YP_001134400.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2564 binding-protein-dependent transport systems inner membrane component YP_001134401.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2565 binding-protein-dependent transport systems inner membrane component YP_001134402.1 PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2566 twin-arginine translocation pathway signal YP_001134403.1 KEGG: mmc:Mmcs_2567 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001134404.1 KEGG: mmc:Mmcs_2568 hypothetical protein YP_001134405.1 PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_3385 major facilitator superfamily MFS_1 YP_001134406.1 PFAM: peptidase S58, DmpA; KEGG: mlo:mll6895 D-aminopeptidase YP_001134407.1 PFAM: TspO/MBR family protein; KEGG: mmc:Mmcs_2570 TspO and MBR like proteins YP_001134408.1 KEGG: mmc:Mmcs_2528 hypothetical protein YP_001134409.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rha:RHA1_ro06437 hypothetical protein YP_001134411.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1286 chloride peroxidase YP_001134412.1 KEGG: nfa:nfa30900 hypothetical protein YP_001134413.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aau:AAur_1866 putative alcohol dehydrogenase YP_001134415.1 KEGG: tfu:Tfu_1754 hypothetical protein YP_001134416.1 KEGG: mmc:Mmcs_3027 hypothetical protein YP_001134417.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: mva:Mvan_3376 peptidoglycan-binding domain 1 protein YP_001134418.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2670 transcriptional regulator, TetR family YP_001134419.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: mmc:Mmcs_0877 NAD-dependent epimerase/dehydratase YP_001134420.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: mmc:Mmcs_2512 aminoglycoside phosphotransferase YP_001134421.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmc:Mmcs_2580 4Fe-4S ferredoxin, iron-sulfur binding protein YP_001134422.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2581 fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_001134423.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2582 ABC transporter related YP_001134424.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2628 binding-protein-dependent transport systems inner membrane component YP_001134425.1 KEGG: mmc:Mmcs_2584 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_001134426.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_5265 glyoxalase/bleomycin resistance protein/dioxygenase YP_001134427.1 PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_5264 transcriptional regulator, ArsR family YP_001134428.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase YP_001134429.1 KEGG: mva:Mvan_4703 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor YP_001134430.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro05667 glutamine transport ATP-binding protein GlnQ YP_001134431.1 PFAM: ABC-3 protein; KEGG: rha:RHA1_ro07269 possible ABC Mn(2+)/Zn(2+) transporter, permease component YP_001134432.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro07270 ABC metal transporter, ATP-binding component YP_001134433.1 PFAM: periplasmic solute binding protein; KEGG: rha:RHA1_ro07271 ABC metal ion transporter, substrate-binding protein YP_001134434.1 PFAM: amidohydrolase; KEGG: art:Arth_3693 allantoinase YP_001134435.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: art:Arth_3413 permease for cytosine/purines, uracil, thiamine, allantoin YP_001134436.1 PFAM: Asp/Glu racemase; KEGG: art:Arth_3412 Asp/Glu racemase YP_001134437.1 PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: mes:Meso_2830 protein of unknown function DUF861, cupin_3 YP_001134438.1 KEGG: art:Arth_3434 hypothetical protein YP_001134439.1 PFAM: regulatory proteins, IclR; KEGG: art:Arth_3431 transcriptional regulator, IclR family YP_001134440.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_001134441.1 KEGG: mmc:Mmcs_2592 hypothetical protein YP_001134442.1 PFAM: cutinase; KEGG: mmc:Mmcs_4980 cutinase YP_001134443.1 PFAM: regulatory protein, ArsR; KEGG: nfa:pnf1320 putative transcriptional regulator YP_001134444.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5743 heavy metal translocating P-type ATPase YP_001134445.1 PFAM: cadmium resistance transporter; KEGG: cgb:cg1033 cadmium resistance transporter YP_001134446.1 KEGG: sma:SAV266 hypothetical protein YP_001134447.1 KEGG: sco:SCO7841 putative ATP/GTP-binding protein YP_001134448.1 PFAM: Integrase, catalytic region; KEGG: rha:RHA1_ro07276 possible transposase YP_001134449.1 KEGG: sco:SCO7843 hypothetical protein YP_001134450.1 PFAM: Appr-1-p processing domain protein; KEGG: nfa:nfa36990 hypothetical protein YP_001134451.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro08197 possible transposase YP_001134452.1 KEGG: mmc:Mmcs_2589 putative integral membrane protein YP_001134453.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region YP_001134456.1 PFAM: transposase, mutator type; KEGG: mmc:Mmcs_5576 transposase, mutator type YP_001134457.1 KEGG: cef:CE2855 hypothetical protein YP_001134458.1 PFAM: GTP-binding protein, HSR1-related; KEGG: cef:CE2856 hypothetical protein YP_001134459.1 PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_5590 transposase IS3/IS911 YP_001134460.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5589 integrase, catalytic region YP_001134462.1 KEGG: fra:Francci3_2839 McrBC 5-methylcytosine restriction system component-like YP_001134463.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: cpf:CPF_0992 McrB domain protein YP_001134464.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sco:SCO6640 putative ATP-dependent helicase YP_001134465.1 KEGG: sco:SCO6639 ATP/GTP binding protein YP_001134466.1 PFAM: PglZ domain; KEGG: fra:Francci3_2955 bacteriophage (phiC31) resistance gene PglZ YP_001134467.1 KEGG: pna:Pnap_4280 putative phage resistance protein YP_001134468.1 KEGG: sco:SCO5331 DNA methylase YP_001134469.1 PFAM: protein kinase; NERD domain protein; SMART: serine/threonine protein kinase; KEGG: fra:Francci3_2952 serine/threonine protein kinase YP_001134472.1 PFAM: helix-turn-helix domain protein YP_001134474.1 KEGG: lxx:Lxx22677 hypothetical protein YP_001134475.1 PFAM: PilT protein domain protein; KEGG: mtc:MT3921 hypothetical protein YP_001134476.1 KEGG: sma:SAV891 quaternary amine transporter YP_001134477.1 PFAM: regulatory protein, MerR; KEGG: cjk:jk1441 putative transcriptional regulator (MerR family) YP_001134478.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: cjk:jk1442 putative mercuric reductase YP_001134479.1 cleaves the carbon-mercury bond of organomercuric compounds YP_001134481.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001134482.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rxy:Rxyl_1774 cytochrome c biogenesis protein, transmembrane region YP_001134483.1 KEGG: sma:SAV266 hypothetical protein YP_001134484.1 KEGG: msm:MSMEG_3321 ATP/GTP-binding protein YP_001134485.1 KEGG: rha:RHA1_ro00011 possible transposase YP_001134486.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_5602 putative transposase for insertion element IS6110 (second part) YP_001134487.1 PFAM: Integrase, catalytic region; KEGG: rha:RHA1_ro07276 possible transposase YP_001134488.1 KEGG: sco:SCO7843 hypothetical protein YP_001134489.1 KEGG: nca:Noca_3326 PilT protein domain protein YP_001134490.1 PFAM: regulatory protein, TetR; KEGG: fra:Francci3_0706 transcriptional regulator, TetR family YP_001134491.1 PFAM: homoserine dehydrogenase, NAD-binding; KEGG: mpa:MAP2523c hypothetical protein YP_001134492.1 PFAM: YaeQ family protein; KEGG: mkm:Mkms_2646 YaeQ family protein YP_001134494.1 KEGG: mmc:Mmcs_3907 luciferase-like protein YP_001134495.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_2628 glucose-methanol-choline oxidoreductase YP_001134496.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mkm:Mkms_1622 bifunctional deaminase-reductase domain protein YP_001134497.1 KEGG: cef:CE1478 hypothetical protein YP_001134498.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mlr2174 hypothetical protein YP_001134499.1 PFAM: regulatory protein, ArsR; KEGG: bha:BH0694 transcriptional regulator (ArsR family) YP_001134500.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mva:Mvan_2950 peptidylprolyl isomerase, FKBP-type YP_001134501.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_5305 alpha/beta hydrolase fold YP_001134502.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5306 transcriptional regulator, TetR family YP_001134503.1 PFAM: RNA-binding S4 domain protein; KEGG: mmc:Mmcs_2663 RNA-binding S4 YP_001134504.1 KEGG: mmc:Mmcs_5260 hypothetical protein YP_001134505.1 KEGG: mva:Mvan_2953 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001134506.1 PFAM: putative esterase; KEGG: mmc:Mmcs_1835 putative esterase YP_001134507.1 KEGG: mmc:Mmcs_0740 hypothetical protein YP_001134508.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_2956 methyltransferase type 12 YP_001134509.1 PFAM: protein of unknown function DUF664; KEGG: sma:SAV7014 hypothetical protein YP_001134510.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_2666 AMP-dependent synthetase and ligase YP_001134511.1 PFAM: luciferase family protein; KEGG: mpa:MAP1598 hypothetical protein YP_001134512.1 KEGG: art:Arth_1127 putative redox protein YP_001134513.1 KEGG: mva:Mvan_2963 conserved hypothetical protein YP_001134514.1 PFAM: protein of unknown function DUF218; KEGG: mmc:Mmcs_0878 protein of unknown function DUF218 YP_001134515.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein YP_001134516.1 PFAM: regulatory protein, TetR; KEGG: bba:Bd3242 transcriptional regulator YP_001134517.1 KEGG: nfa:nfa29690 hypothetical protein YP_001134518.1 PFAM: NLP/P60 protein; KEGG: mva:Mvan_2970 NLP/P60 protein YP_001134519.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein YP_001134520.1 PFAM: protein of unknown function DUF899, thioredoxin family protein; KEGG: mmc:Mmcs_0337 protein of unknown function DUF899, thioredoxin-like protein YP_001134521.1 PFAM: TENA/THI-4 domain protein; KEGG: mva:Mvan_2973 transcriptional activator, TenA family YP_001134522.1 PFAM: GTP cyclohydrolase II; KEGG: mmc:Mmcs_5190 GTP cyclohydrolase II domain protein YP_001134523.1 PFAM: protein of unknown function DUF1688; KEGG: rha:RHA1_ro00257 hypothetical protein YP_001134524.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: rha:RHA1_ro00256 uracil phosphoribosyltransferase YP_001134525.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mva:Mvan_2977 isocitrate lyase YP_001134526.1 KEGG: nfa:nfa55430 O-succinylbenzoate-CoA synthase YP_001134527.1 KEGG: mpa:MAP1429 hypothetical protein YP_001134528.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_001134529.1 PFAM: globin; KEGG: fra:Francci3_2581 globin YP_001134531.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_2685 lipolytic enzyme, G-D-S-L YP_001134532.1 PFAM: acyltransferase 3; KEGG: mmc:Mmcs_2686 acyltransferase 3 YP_001134533.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_2688 response regulator receiver modulated serine phosphatase YP_001134534.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: mva:Mvan_2988 multi-sensor signal transduction histidine kinase YP_001134535.1 PFAM: response regulator receiver; KEGG: mmc:Mmcs_2690 response regulator receiver protein YP_001134536.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: mmc:Mmcs_2694 type I phosphodiesterase/nucleotide pyrophosphatase YP_001134537.1 KEGG: mmc:Mmcs_2693 hypothetical protein YP_001134538.1 PFAM: protein of unknown function DUF328; KEGG: mmc:Mmcs_2696 protein of unknown function DUF328 YP_001134539.1 KEGG: mmc:Mmcs_2703 hypothetical protein YP_001134540.1 KEGG: mmc:Mmcs_0989 hypothetical protein YP_001134541.1 KEGG: rha:RHA1_ro02431 hypothetical protein YP_001134542.1 KEGG: mva:Mvan_2996 conserved hypothetical protein YP_001134543.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2581c hypothetical protein YP_001134544.1 KEGG: mva:Mvan_2998 conserved hypothetical protein YP_001134545.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mmc:Mmcs_2707 competence-damaged protein YP_001134546.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_3000 short-chain dehydrogenase/reductase SDR YP_001134547.1 PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_2712 dihydrodipicolinate reductase YP_001134548.1 KEGG: mmc:Mmcs_2713 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001134549.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2714 anti-sigma-factor antagonist YP_001134550.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_2716 HAD-superfamily subfamily IB, PSPase-like protein YP_001134551.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mpa:MAP1618c hypothetical protein YP_001134552.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_3009 transcriptional regulator, TetR family YP_001134553.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_2721 formate dehydrogenase YP_001134554.1 KEGG: mmc:Mmcs_2722 hypothetical protein YP_001134555.1 PFAM: cytochrome P450; KEGG: mpa:MAP1614c putative cytochrome P450 YP_001134556.1 KEGG: mva:Mvan_3013 conserved hypothetical protein YP_001134557.1 PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_2725 transcriptional regulator, XRE family YP_001134558.1 KEGG: mva:Mvan_3018 conserved hypothetical protein YP_001134559.1 KEGG: mle:ML1234 possible acyl-CoA synthase YP_001134560.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: art:Arth_2688 glucose-1-phosphate thymidylyltransferase YP_001134561.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: art:Arth_2679 dTDP-glucose 4,6-dehydratase YP_001134562.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: aau:AAur_3161 dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase YP_001134563.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nfa:nfa34280 hypothetical protein YP_001134564.1 KEGG: mmc:Mmcs_2730 hypothetical protein YP_001134565.1 KEGG: mpa:MAP1611 hypothetical protein YP_001134566.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mmc:Mmcs_2731 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001134567.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2733 thioesterase superfamily YP_001134568.1 TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_2734 agmatinase, putative YP_001134569.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_3025 cyclopropane-fatty-acyl-phospholipid synthase YP_001134570.1 KEGG: mmc:Mmcs_2736 hypothetical protein YP_001134571.1 KEGG: mmc:Mmcs_2741 hypothetical protein YP_001134572.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_2742 cytochrome P450 YP_001134573.1 KEGG: mva:Mvan_3031 hypothetical protein YP_001134574.1 KEGG: mmc:Mmcs_0238 hypothetical protein YP_001134575.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_2748 glycosyl transferase, group 1 YP_001134576.1 PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_2750 dienelactone hydrolase YP_001134577.1 KEGG: mva:Mvan_3035 conserved hypothetical protein YP_001134578.1 PFAM: protein of unknown function DUF1486; Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2753 limonene-1,2-epoxide hydrolase YP_001134579.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: mva:Mvan_3037 amidohydrolase 3 YP_001134580.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rha:RHA1_ro03808 hypothetical protein YP_001134581.1 PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: rha:RHA1_ro03807 probable transcriptional regulator, ArsR family YP_001134582.1 PFAM: amidohydrolase 2; KEGG: mbo:Mb1911 hypothetical protein YP_001134583.1 PFAM: glutamine synthetase, catalytic region; KEGG: mmc:Mmcs_2754 glutamine synthetase, catalytic region YP_001134584.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_3041 carboxymuconolactone decarboxylase YP_001134585.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2756 drug resistance transporter EmrB/QacA subfamily YP_001134586.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: mmc:Mmcs_2757 bacterioferritin YP_001134587.1 KEGG: mva:Mvan_3044 FadD16 YP_001134588.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_2759 BFD-like (2Fe-2S)-binding region YP_001134589.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1593 putative enoyl-CoA hydratase/isomerase YP_001134590.1 KEGG: mva:Mvan_3047 conserved hypothetical protein YP_001134591.1 PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: mmc:Mmcs_2762 membrane protein-like protein YP_001134592.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2763 thioesterase superfamily YP_001134593.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2767 putative transcriptional regulator, TetR family YP_001134594.1 KEGG: mmc:Mmcs_2768 integral membrane protein YP_001134595.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mva:Mvan_3057 tetratricopeptide TPR_2 repeat protein YP_001134596.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mmc:Mmcs_2770 CMP/dCMP deaminase, zinc-binding protein YP_001134597.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mmc:Mmcs_2771 alpha amylase, catalytic region YP_001134598.1 KEGG: mmc:Mmcs_2772 hypothetical protein YP_001134599.1 PFAM: putative esterase; KEGG: mmc:Mmcs_2773 putative esterase YP_001134600.1 KEGG: mmc:Mmcs_2775 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: peptidase S16, lon domain protein; AAA ATPase YP_001134601.1 KEGG: mmc:Mmcs_2777 hypothetical protein YP_001134602.1 KEGG: mva:Mvan_3066 conserved hypothetical protein YP_001134603.1 catalyzes the oxidation of malate to oxaloacetate YP_001134604.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001134605.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: ana:all2567 putative phosphoketolase YP_001134606.1 PFAM: Abortive infection protein; KEGG: mbo:Mb1894c probable conserved integral membrane protein YP_001134607.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP1571 alcohol dehydrogenase YP_001134608.1 PFAM: Transglycosylase-associated protein; KEGG: msm:MSMEG_3616 integral membrane protein YP_001134609.1 PFAM: Fibronectin-attachment family protein; KEGG: mmc:Mmcs_2796 fibronectin-attachment YP_001134610.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_3076 short-chain dehydrogenase/reductase SDR YP_001134611.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_2800 luciferase-like protein YP_001134612.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2801 NADH dehydrogenase YP_001134613.1 KEGG: mva:Mvan_3079 putative urease accessory protein YP_001134614.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: mmc:Mmcs_2803 urease accessory protein UreG YP_001134615.1 KEGG: mmc:Mmcs_2804 urease accessory protein UreF YP_001134616.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001134617.1 KEGG: mmc:Mmcs_2806 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit YP_001134618.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter YP_001134619.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2808 phenylacetic acid degradation-related protein YP_001134620.1 KEGG: mva:Mvan_3086 conserved hypothetical protein YP_001134621.1 PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_2810 transcriptional repressor, CopY family YP_001134622.1 PFAM: peptidase M48, Ste24p; KEGG: mmc:Mmcs_2811 peptidase M48, Ste24p YP_001134623.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_001134624.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001134625.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rha:RHA1_ro08545 Fe(3+)-transporting ATPase protein SfuC YP_001134626.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3092 binding-protein-dependent transport systems inner membrane component YP_001134627.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rxy:Rxyl_1175 extracellular solute-binding protein, family 1 YP_001134628.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_2814 protein of unknown function DUF21 YP_001134629.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: mmc:Mmcs_2815 protein of unknown function DUF21 YP_001134630.1 KEGG: mmc:Mmcs_2816 hypothetical protein YP_001134631.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_001134632.1 PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2818 hypothetical protein YP_001134633.1 PFAM: fatty acid desaturase; KEGG: mva:Mvan_3100 alkane 1-monooxygenase YP_001134634.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4117 short-chain dehydrogenase/reductase SDR YP_001134635.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mva:Mvan_3103 PE-PPE, C-terminal domain protein YP_001134636.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0561 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001134637.1 PFAM: cutinase; KEGG: mbo:Mb2006c probable cutinase precursor CFP21 YP_001134638.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein YP_001134639.1 PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP3216 Omt YP_001134640.1 PFAM: cytochrome P450; KEGG: mpa:MAP3553 putative cytochrome P450 YP_001134641.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2826 hypothetical protein YP_001134642.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb2640 PPE family protein YP_001134643.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2984 hypothetical protein YP_001134644.1 PFAM: luciferase family protein; KEGG: mbb:BCG_2972c putative oxidoreductase YP_001134646.1 PFAM: nitroreductase; KEGG: mmc:Mmcs_1184 nitroreductase YP_001134647.1 KEGG: mpa:MAP3164 hypothetical protein YP_001134648.1 KEGG: dar:Daro_2367 hypothetical protein YP_001134649.1 PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_5088 O-methyltransferase-like protein YP_001134650.1 required for PDIM synthesis; phthiocerol and phthiodiolone dimycocerosate esters are scaffolds used for virulence-enhancing lipids; proposed to catalyze diesterification of phthiocerol and phthiodolone with mycocerosate; functions in polyketide synthesis YP_001134651.1 TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mva:Mvan_3120 ABC drug efflux pump, inner membrane subunit, DrrB family YP_001134652.1 PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2830 ABC transporter, DrrB efflux protein YP_001134653.1 KEGG: mmc:Mmcs_2831 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001134654.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; condensation domain protein; phosphopantetheine-binding; KEGG: mtc:MT3005 polyketide synthase YP_001134655.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mbo:Mb2959 phenolpthiocerol synthesis type-I polyketide synthase PpsD YP_001134656.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2833 beta-ketoacyl synthase YP_001134657.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase YP_001134658.1 activates fatty acids by binding to coenzyme A YP_001134659.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mtu:Rv2931 phenolpthiocerol synthesis polyketide synthase YP_001134660.1 activates fatty acids by binding to coenzyme A YP_001134661.1 PFAM: Thioesterase; KEGG: mle:ML2359 thioesterase YP_001134662.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001134663.1 SMART: regulatory protein, MerR; KEGG: mkm:Mkms_2885 putative transcriptional regulator, MerR family YP_001134664.1 PFAM: protein of unknown function DUF151; KEGG: mmc:Mmcs_2842 protein of unknown function DUF151 YP_001134665.1 PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_2843 transcriptional regulator, MerR family YP_001134666.1 PFAM: Forkhead-associated protein; KEGG: mva:Mvan_3135 FHA domain containing protein YP_001134667.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001134668.1 PFAM: protein of unknown function DUF881; KEGG: mmc:Mmcs_2846 protein of unknown function DUF881 YP_001134669.1 PFAM: protein of unknown function DUF1290; KEGG: mva:Mvan_3138 protein of unknown function DUF1290 YP_001134670.1 PFAM: protein of unknown function DUF881; KEGG: mmc:Mmcs_2848 protein of unknown function DUF881 YP_001134671.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2849 CDP-alcohol phosphatidyltransferase YP_001134672.1 SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins YP_001134673.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_3163 ABC transporter domain protein YP_001134674.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2854 ABC transporter-like protein YP_001134675.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mpa:MAP1530 hypothetical protein YP_001134676.1 KEGG: mmc:Mmcs_2857 hypothetical protein YP_001134678.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_3167 transcriptional regulator, TetR family YP_001134679.1 KEGG: mmc:Mmcs_2859 hypothetical protein YP_001134680.1 KEGG: mmc:Mmcs_2860 hypothetical protein YP_001134681.1 PFAM: FAD dependent oxidoreductase; KEGG: mva:Mvan_3170 FAD dependent oxidoreductase YP_001134682.1 KEGG: mmc:Mmcs_2864 sterol desaturase-related protein YP_001134683.1 PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2865 carboxylesterase, type B YP_001134684.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2868 major facilitator superfamily MFS_1 YP_001134685.1 KEGG: mmc:Mmcs_2869 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77 YP_001134686.1 PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_2855 protein of unknown function DUF222 YP_001134688.1 KEGG: mmc:Mmcs_2870 hypothetical protein YP_001134689.1 KEGG: mmc:Mmcs_2874 hypothetical protein YP_001134690.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mva:Mvan_3180 ferredoxin YP_001134691.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mbo:Mb1775 anchored-membrane serine/threonine-protein kinase PknF (protein kinase F) (StpK F) YP_001134692.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_2879 NUDIX hydrolase YP_001134693.1 KEGG: mbo:Mb3271c hypothetical protein YP_001134694.1 KEGG: mmc:Mmcs_2886 hypothetical protein YP_001134695.1 PFAM: nuclear transport factor 2; KEGG: mmc:Mmcs_2888 nuclear transport factor 2 YP_001134696.1 KEGG: mbo:Mb0321 hypothetical protein YP_001134697.1 PFAM: membrane family protein; KEGG: mbo:Mb0696c possible conserved membrane protein MmpS5 YP_001134698.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein YP_001134699.1 PFAM: protein of unknown function DUF732; KEGG: mva:Mvan_3190 protein of unknown function DUF732 YP_001134700.1 KEGG: mmc:Mmcs_5070 putative secreted protein YP_001134701.1 KEGG: mva:Mvan_3192 conserved hypothetical protein YP_001134702.1 PFAM: major facilitator superfamily MFS_1; KEGG: pat:Patl_3455 major facilitator superfamily MFS_1 YP_001134703.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5211 acyl-CoA dehydrogenase, type 2-like protein YP_001134705.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_4486 ethanolamine permease YP_001134707.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: mmc:Mmcs_3402 RNA binding S1 YP_001134708.1 catalyzes the formation of acetate from pyruvate YP_001134709.1 PFAM: Catalase domain protein; KEGG: fal:FRAAL3889 catalase; hydroperoxidase HPII (III), RpoS-dependent YP_001134710.1 PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: rha:RHA1_ro08767 hypothetical protein YP_001134711.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mbo:Mb0844c probable phosphate-transport system transcriptional regulatory protein PhoY2 YP_001134712.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_1278 glycosyl transferase, group 1 YP_001134713.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3234c hypothetical protein YP_001134714.1 KEGG: mmc:Mmcs_2682 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_001134715.1 PFAM: ferric-uptake regulator; KEGG: mbo:Mb1944c ferric uptake regulation protein FurA (fur) YP_001134716.1 KEGG: mmc:Mmcs_2903 hypothetical protein YP_001134717.1 KEGG: mva:Mvan_3211 hypothetical protein YP_001134718.1 KEGG: mmc:Mmcs_1209 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type YP_001134719.1 KEGG: mbo:Mb0351c probable lipoprotein LpqJ YP_001134720.1 KEGG: mmc:Mmcs_2904 hypothetical protein YP_001134721.1 PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hch:HCH_03222 protein containing hemopexin repeats YP_001134722.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0707 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001134723.1 PFAM: Methyltransferase type 11; KEGG: mmc:Mmcs_1547 methyltransferase type 11 YP_001134724.1 KEGG: mmc:Mmcs_1546 methylenetetrahydrofolate reductase YP_001134725.1 PFAM: cobalt transport protein; KEGG: mmc:Mmcs_5279 cobalt transport protein YP_001134726.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_5280 ABC transporter related YP_001134727.1 PFAM: BioY protein; KEGG: mmc:Mmcs_5281 BioY protein YP_001134728.1 PFAM: alpha/beta hydrolase fold; peptidase S15; KEGG: tfu:Tfu_0267 conserved hypothetical protein YP_001134729.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0854 short-chain dehydrogenase/reductase SDR YP_001134730.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mkm:Mkms_0870 protein of unknown function DUF6, transmembrane YP_001134731.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_4521 protein tyrosine phosphatase YP_001134732.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: rha:RHA1_ro03368 probable arsenic resistance transporter YP_001134733.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro04132 possible lactoylglutathione lyase YP_001134734.1 PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2999 transcriptional regulator, ArsR family YP_001134735.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_4344 transcriptional regulator, AraC family YP_001134736.1 PFAM: beta-lactamase; KEGG: bja:blr6983 probable 1,4-butanediol diacrylate esterase YP_001134737.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0008c hypothetical protein YP_001134738.1 PFAM: cytochrome P450; KEGG: mpa:MAP0009 putative cytochrome P450 YP_001134739.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001134740.1 PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222 YP_001134741.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase YP_001134742.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mav:MAV_4173 oxidoreductase, zinc-binding dehydrogenase family protein YP_001134743.1 KEGG: mpa:MAP3327c hypothetical protein YP_001134744.1 PFAM: beta-lactamase domain protein; KEGG: mpa:MAP3329c hypothetical protein YP_001134745.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP3330 hypothetical protein YP_001134746.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3331 hypothetical protein YP_001134747.1 KEGG: mtc:MT0636 hypothetical protein YP_001134748.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pac:PPA0240 hypothetical protein YP_001134749.1 KEGG: nca:Noca_3981 LexA DNA-binding domain protein YP_001134750.1 KEGG: ace:Acel_0500 hypothetical protein YP_001134751.1 PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: pac:PPA0092 hypothetical protein YP_001134752.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: mmc:Mmcs_2924 deoxyribodipyrimidine photolyase-related protein YP_001134753.1 KEGG: mmc:Mmcs_2926 protein of unknown function DUF81 YP_001134754.1 PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_2925 protein of unknown function DUF81 YP_001134755.1 synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001134756.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_001134757.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mmc:Mmcs_2929 pseudouridine synthase, Rsu YP_001134758.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mmc:Mmcs_2930 putative transcriptional regulator YP_001134759.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mmc:Mmcs_2931 chromosome segregation and condensation protein ScpA YP_001134760.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mmc:Mmcs_2932 cobyrinic acid a,c-diamide synthase YP_001134761.1 PFAM: O-methyltransferase, family 3; KEGG: mtc:MT1743 catechol-O-methyltransferase YP_001134762.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001134763.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_3282 NUDIX hydrolase YP_001134764.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001134765.1 KEGG: mmc:Mmcs_2945 hypothetical protein YP_001134766.1 KEGG: mmc:Mmcs_2946 hypothetical protein YP_001134767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_2947 glyoxalase/bleomycin resistance protein/dioxygenase YP_001134768.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_3287 transcriptional regulator, TetR family YP_001134769.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mmc:Mmcs_2949 DNA repair protein RecN YP_001134770.1 catalyzes the phosphorylation of NAD to NADP YP_001134771.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mmc:Mmcs_2951 hemolysin A YP_001134772.1 KEGG: mva:Mvan_3291 conserved hypothetical protein YP_001134773.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_2953 HAD-superfamily hydrolase, subfamily IIA YP_001134774.1 KEGG: mmc:Mmcs_2954 hypothetical protein YP_001134775.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_001134776.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_001134777.1 PFAM: protein of unknown function DUF343; KEGG: mmc:Mmcs_2960 protein of unknown function DUF343 YP_001134778.1 KEGG: mmc:Mmcs_2961 hypothetical protein YP_001134779.1 activates fatty acids by binding to coenzyme A YP_001134780.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2963 ABC transporter related YP_001134781.1 KEGG: bbr:BB1601 hypothetical protein YP_001134783.1 KEGG: mva:Mvan_3305 hypothetical protein YP_001134785.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001134786.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_001134787.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_001134788.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_001134789.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_001134790.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_001134791.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_001134792.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_001134793.1 PFAM: FAD dependent oxidoreductase; KEGG: fra:Francci3_1888 FAD dependent oxidoreductase YP_001134794.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001134795.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001134796.1 KEGG: syg:sync_1834 hypothetical protein YP_001134797.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_2975 adenylate/guanylate cyclase YP_001134798.1 KEGG: mmc:Mmcs_2976 hypothetical protein YP_001134799.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2977 acyl-CoA dehydrogenase-like protein YP_001134800.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0188 short-chain dehydrogenase/reductase SDR YP_001134801.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: mmc:Mmcs_2978 tRNA/rRNA methyltransferase (SpoU) YP_001134802.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001134803.1 PFAM: ribosomal protein L35; KEGG: mbo:Mb1669 50S ribosomal protein l35 RpmI YP_001134804.1 PFAM: initiation factor 3; KEGG: mmc:Mmcs_2981 translation initiation factor IF-3 YP_001134805.1 KEGG: rha:RHA1_ro00965 hypothetical protein YP_001134806.1 catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001134807.1 PFAM: putative esterase; KEGG: mva:Mvan_3331 putative esterase YP_001134808.1 KEGG: mpa:MAP1342c hypothetical protein YP_001134809.1 KEGG: mmc:Mmcs_2986 hypothetical protein YP_001134810.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_001134811.1 PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_2989 beta-lactamase-like protein YP_001134812.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis YP_001134813.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_2992 UspA YP_001134814.1 PFAM: cutinase; KEGG: mmc:Mmcs_5300 cutinase YP_001134815.1 PFAM: small multidrug resistance protein; KEGG: mmc:Mmcs_2867 small multidrug resistance protein YP_001134816.1 PFAM: small multidrug resistance protein; KEGG: mva:Mvan_3346 small multidrug resistance protein YP_001134818.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001134819.1 PFAM: protein of unknown function DUF402; KEGG: mmc:Mmcs_3002 protein of unknown function DUF402 YP_001134820.1 KEGG: mkm:Mkms_3049 conserved hypothetical protein YP_001134821.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain YP_001134822.1 KEGG: cgb:cg0040 putative secreted protein YP_001134823.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001134824.1 KEGG: mmc:Mmcs_3009 hypothetical protein YP_001134825.1 KEGG: mpa:MAP1749 hypothetical protein YP_001134826.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair YP_001134827.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mmc:Mmcs_3012 transcriptional regulator, LysR family YP_001134828.1 KEGG: mmc:Mmcs_3013 hypothetical protein YP_001134829.1 PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3014 protein of unknown function DUF35 YP_001134830.1 KEGG: mmc:Mmcs_3015 lipid-transfer protein YP_001134831.1 PFAM: protein of unknown function DUF167; KEGG: mtc:MT2038 hypothetical protein YP_001134832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3016 ABC transporter related YP_001134833.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3017 ABC transporter related YP_001134834.1 PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_3018 inner-membrane translocator YP_001134835.1 PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_3019 inner-membrane translocator YP_001134836.1 PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_3020 extracellular ligand-binding receptor YP_001134837.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: mmc:Mmcs_3021 response regulator receiver and ANTAR domain protein YP_001134838.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_3025 adenylate/guanylate cyclase YP_001134839.1 PFAM: Ferritin, Dps family protein; KEGG: mkm:Mkms_3087 ferritin, Dps family protein YP_001134840.1 KEGG: mmc:Mmcs_3029 hypothetical protein YP_001134841.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_3030 two component transcriptional regulator, LuxR family YP_001134842.1 PFAM: ATP-binding region, ATPase domain protein; KEGG: mmc:Mmcs_3031 putative signal transduction histidine kinase YP_001134843.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3032 ABC transporter related YP_001134844.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_2833 polar amino acid ABC transporter, inner membrane subunit YP_001134845.1 PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_3034 extracellular solute-binding protein, family 3 YP_001134846.1 PFAM: protein of unknown function DUF308, membrane; KEGG: mpa:MAP1317c hypothetical protein YP_001134847.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: mmc:Mmcs_3036 cytochrome bd ubiquinol oxidase, subunit I YP_001134848.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mmc:Mmcs_3037 cytochrome d ubiquinol oxidase, subunit II YP_001134849.1 KEGG: mmc:Mmcs_3038 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001134850.1 KEGG: mmc:Mmcs_3039 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter related; SMART: AAA ATPase YP_001134851.1 KEGG: mva:Mvan_2826 conserved hypothetical protein YP_001134852.1 PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_3041 acyl-CoA thioesterase YP_001134853.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001134854.1 TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3043 glutamate synthases, NADH/NADPH, small subunit YP_001134855.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mva:Mvan_2822 glutamate synthase (ferredoxin) YP_001134856.1 KEGG: mmc:Mmcs_3045 hypothetical protein YP_001134857.1 PFAM: TM2 domain containing protein+B7201; KEGG: mmc:Mmcs_3046 TM2 domain containing protein YP_001134858.1 PFAM: protein of unknown function DUF222; KEGG: mbo:Mb0528 conserved 13E12 repeat family protein YP_001134859.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mmc:Mmcs_3048 prolipoprotein diacylglyceryl transferase YP_001134860.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001134861.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001134862.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_001134863.1 TIGRFAM: trp region conserved hypothetical membrane protein; KEGG: mmc:Mmcs_3052 Trp region conserved hypothetical membrane protein YP_001134864.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_001134865.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpa:MAP1302c bacterioferritin comigratory protein YP_001134866.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa24620 putative ABC transporter ATP-binding protein YP_001134867.1 PFAM: transposase, IS4 family protein; KEGG: rha:RHA1_ro08197 possible transposase YP_001134868.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mpa:MAP1300 phosphoribosyl-AMP cyclohydrolase YP_001134869.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001134870.1 PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_3058 inositol monophosphatase YP_001134871.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis YP_001134872.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001134873.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001134874.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001134875.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001134876.1 KEGG: mmc:Mmcs_3064 hypothetical protein YP_001134877.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mva:Mvan_2802 lysine exporter protein (LysE/YggA) YP_001134878.1 KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein YP_001134879.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_001134880.1 catalyzes the formation of oxaloacetate from L-aspartate YP_001134881.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001134882.1 PFAM: NUDIX hydrolase; KEGG: mbo:Mb1619c hypothetical protein YP_001134883.1 PFAM: secretory lipase; KEGG: mmc:Mmcs_3070 triacylglycerol lipase YP_001134884.1 KEGG: mmc:Mmcs_3071 putative transmembrane protein YP_001134885.1 KEGG: mbo:Mb1616 hypothetical protein YP_001134886.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_001134887.1 PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mva:Mvan_2792 transcriptional regulator, TetR family YP_001134888.1 KEGG: mmc:Mmcs_3075 hypothetical protein YP_001134889.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium YP_001134890.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_001134891.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate YP_001134892.1 PFAM: acyltransferase 3; KEGG: mmc:Mmcs_3079 acyltransferase 3 YP_001134893.1 KEGG: mmc:Mmcs_3080 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain YP_001134894.1 KEGG: mva:Mvan_2785 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain YP_001134895.1 KEGG: mva:Mvan_2784 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain YP_001134896.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_001134897.1 KEGG: mmc:Mmcs_3085 hypothetical protein YP_001134898.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_001134899.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3088 transcriptional regulator, TetR family YP_001134900.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_3091 RarD protein YP_001134901.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mmc:Mmcs_3092 pseudouridine synthase, RluD YP_001134902.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001134903.1 PFAM: Asparaginase/glutaminase; KEGG: mmc:Mmcs_3094 asparaginase/glutaminase YP_001134904.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001134905.1 PFAM: RNA-binding S4 domain protein; KEGG: mmc:Mmcs_3096 RNA-binding S4 YP_001134906.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_001134907.1 KEGG: mva:Mvan_2768 conserved hypothetical protein YP_001134908.1 KEGG: msm:MSMEG_3163 GP55 protein YP_001134909.1 PFAM: beta-lactamase; KEGG: mmc:Mmcs_3120 beta-lactamase YP_001134910.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_001134911.1 MDM; functions in conversion of succinate to propionate YP_001134912.1 KEGG: mmc:Mmcs_3123 methylmalonyl-CoA mutase, small subunit; TIGRFAM: methylmalonyl-CoA mutase, beta subunit; PFAM: methylmalonyl-CoA mutase YP_001134913.1 KEGG: mmc:Mmcs_3124 hypothetical protein YP_001134914.1 KEGG: mmc:Mmcs_3125 hypothetical protein YP_001134915.1 PFAM: band 7 protein; KEGG: mmc:Mmcs_3126 band 7 protein YP_001134916.1 PFAM: protein of unknown function DUF107; KEGG: mmc:Mmcs_3127 protein of unknown function DUF107 YP_001134917.1 KEGG: mmc:Mmcs_3128 hypothetical protein YP_001134918.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_001134919.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_001134920.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP1209 3-oxoacyl- [acyl-carrier protein] reductase YP_001134921.1 PFAM: von Willebrand factor, type A; KEGG: mva:Mvan_2751 von Willebrand factor, type A YP_001134922.1 KEGG: mmc:Mmcs_2454 hypothetical protein YP_001134923.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mmc:Mmcs_2453 ATPase associated with various cellular activities, AAA_3 YP_001134924.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2452 NLP/P60 YP_001134925.1 PFAM: NLP/P60 protein; KEGG: mva:Mvan_2747 NLP/P60 protein YP_001134926.1 KEGG: mmc:Mmcs_2450 hypothetical protein YP_001134927.1 Catalyzes the conversion of citrate to isocitrate YP_001134928.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2448 transcriptional regulator, TetR family YP_001134929.1 KEGG: mmc:Mmcs_2447 hypothetical protein YP_001134930.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2446 ABC transporter related YP_001134931.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001134932.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmc:Mmcs_2444 thioredoxin YP_001134933.1 KEGG: mbo:Mb3795 hypothetical protein YP_001134934.1 PFAM: protein of unknown function DUF59; KEGG: mmc:Mmcs_2441 protein of unknown function DUF59 YP_001134935.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: mmc:Mmcs_2440 SUF system FeS assembly protein YP_001134936.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: mmc:Mmcs_2439 cysteine desulfurases, SufS subfamily YP_001134937.1 KEGG: nfa:nfa35580 putative ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase YP_001134938.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mmc:Mmcs_2437 FeS assembly protein SufD YP_001134939.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mmc:Mmcs_2436 FeS assembly protein SufB YP_001134940.1 PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: mva:Mvan_2732 putative transcriptional regulator YP_001134941.1 KEGG: mmc:Mmcs_2434 hypothetical protein YP_001134942.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_2730 ABC transporter-related protein YP_001134943.1 TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2432 ABC transporter, DrrB efflux protein YP_001134944.1 KEGG: mmc:Mmcs_2431 hypothetical protein YP_001134945.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2430 transcriptional regulator, TetR family YP_001134946.1 PFAM: cytochrome oxidase assembly; KEGG: mmc:Mmcs_2429 cytochrome oxidase assembly YP_001134947.1 KEGG: mmc:Mmcs_2428 hypothetical protein YP_001134948.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2427 alcohol dehydrogenase, zinc-binding protein YP_001134949.1 PFAM: protein of unknown function DUF1214; KEGG: reu:Reut_B5159 protein of unknown function DUF1214 YP_001134950.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001134951.1 PFAM: transposase IS3/IS911 family protein YP_001134952.1 PFAM: protein of unknown function DUF1254; KEGG: rpe:RPE_1072 carboxylesterase, type B YP_001134953.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001134954.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_001134955.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate YP_001134956.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001134957.1 TIGRFAM: OpcA protein; KEGG: mmc:Mmcs_2411 OpcA protein YP_001134958.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mmc:Mmcs_2410 6-phosphogluconolactonase YP_001134959.1 KEGG: mmc:Mmcs_4605 hypothetical protein YP_001134960.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001134961.1 KEGG: mmc:Mmcs_4917 protein of unknown function DUF222 YP_001134962.1 PFAM: protein of unknown function DUF162; KEGG: rha:RHA1_ro03481 hypothetical protein YP_001134963.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: fal:FRAAL3348 putative Fe4-S4 ferredoxin YP_001134964.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mva:Mvan_2709 protein of unknown function DUF224, cysteine-rich region domain protein YP_001134965.1 KEGG: mmc:Mmcs_2409 hypothetical protein YP_001134966.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_001134967.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mva:Mvan_2706 preprotein translocase, SecG subunit YP_001134968.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_001134969.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001134970.1 KEGG: mmc:Mmcs_2404 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001134971.1 PFAM: extracellular solute-binding protein, family 3; KEGG: rha:RHA1_ro05143 amino acid transporter YP_001134972.1 PFAM: protein of unknown function DUF199; KEGG: mmc:Mmcs_2398 protein of unknown function DUF199 YP_001134973.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_2397 hypothetical protein YP_001134974.1 PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: mmc:Mmcs_2396 uncharacterised P-loop ATPase protein UPF0042 YP_001134975.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001134976.1 KEGG: msm:MSMEG_3076 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001134977.1 KEGG: mpa:MAP1142 hypothetical protein YP_001134978.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001134979.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate YP_001134980.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_2825 PE-PPE-like protein YP_001134981.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001134982.1 KEGG: mmc:Mmcs_4597 putative dehydrogenase protein YP_001134983.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mmc:Mmcs_4598 alpha amylase, catalytic region YP_001134984.1 PFAM: protein of unknown function DUF1396; KEGG: mmc:Mmcs_2388 protein of unknown function DUF1396 YP_001134985.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2387 major facilitator superfamily MFS_1 YP_001134987.1 KEGG: mmc:Mmcs_2386 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein YP_001134988.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_001134989.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: mmc:Mmcs_2384 Fmu (Sun) YP_001134990.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth YP_001134991.1 PFAM: LemA family protein; KEGG: mmc:Mmcs_2382 LemA YP_001134992.1 KEGG: mmc:Mmcs_2381 hypothetical protein YP_001134993.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_001134994.1 PFAM: YhhN family protein; KEGG: mmc:Mmcs_2378 YhhN-like protein YP_001134995.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mbo:Mb1435c probable lipase LipH YP_001134996.1 KEGG: mva:Mvan_2671 cyclohexanone monooxygenase YP_001134997.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001134998.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine YP_001134999.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001135000.1 Essential for recycling GMP and indirectly, cGMP YP_001135001.1 KEGG: mmc:Mmcs_2369 MihF YP_001135002.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001135003.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_001135004.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_001135005.1 KEGG: mmc:Mmcs_2365 putative export or membrane protein YP_001135006.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001135007.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001135008.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_001135009.1 PFAM: beta-lactamase; KEGG: mmc:Mmcs_2361 beta-lactamase YP_001135010.1 SMART: HNH nuclease; KEGG: mmc:Mmcs_4699 hypothetical protein YP_001135011.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_001135012.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001135013.1 PFAM: creatinase; peptidase M24; KEGG: mmc:Mmcs_2357 peptidase M24 YP_001135014.1 KEGG: mva:Mvan_2649 conserved hypothetical protein YP_001135015.1 KEGG: mmc:Mmcs_3425 hypothetical protein YP_001135016.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_001135017.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_001135018.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001135019.1 PFAM: peptidase A24A, prepilin type IV; KEGG: mva:Mvan_2644 peptidase A24A, prepilin type IV YP_001135020.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001135021.1 PFAM: aminodeoxychorismate lyase; KEGG: mmc:Mmcs_2348 aminodeoxychorismate lyase YP_001135022.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; KEGG: mva:Mvan_2641 Holliday junction resolvase YqgF YP_001135023.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001135024.1 PFAM: protein of unknown function UPF0047; KEGG: mmc:Mmcs_2345 protein of unknown function UPF0047 YP_001135025.1 KEGG: mmc:Mmcs_2343 putative transglycosylase associated protein YP_001135026.1 PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mmc:Mmcs_2325 AAA ATPase, central region YP_001135027.1 KEGG: mmc:Mmcs_2324 hypothetical protein YP_001135028.1 KEGG: mva:Mvan_2631 conserved hypothetical protein YP_001135029.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mmc:Mmcs_2322 transglutaminase-like protein YP_001135030.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mmc:Mmcs_2321 protein of unknown function DUF404 YP_001135031.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: mva:Mvan_2628 transglutaminase, N-terminal domain protein YP_001135032.1 PFAM: conserved hypothetical protein 341; KEGG: mmc:Mmcs_2319 conserved hypothetical protein 341 YP_001135033.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: mva:Mvan_2626 transcriptional regulator, DeoR family YP_001135034.1 PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2422 carbohydrate kinase, FGGY YP_001135035.1 PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2420 extracellular solute-binding protein, family 1 YP_001135036.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2419 binding-protein-dependent transport systems inner membrane component YP_001135037.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2418 binding-protein-dependent transport systems inner membrane component YP_001135038.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2417 ABC transporter related YP_001135039.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_2620 short-chain dehydrogenase/reductase SDR YP_001135040.1 PFAM: photosystem I assembly BtpA; KEGG: mmc:Mmcs_2423 photosystem I assembly BtpA YP_001135041.1 PFAM: helix-turn-helix, HxlR type; KEGG: mmc:Mmcs_2318 transcriptional regulator, HxlR family YP_001135042.1 KEGG: mpa:MAP3337 acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase YP_001135043.1 KEGG: mmc:Mmcs_2315 hypothetical protein YP_001135044.1 KEGG: mbo:Mb0734 probable conserved transmembrane protein YP_001135045.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_001135046.1 KEGG: mva:Mvan_2614 conserved hypothetical protein YP_001135047.1 PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_2305 carboxylesterase, type B YP_001135048.1 PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: mva:Mvan_2608 protein of unknown function, zinc metallopeptidase putative YP_001135049.1 PFAM: protein of unknown function DUF885; KEGG: mmc:Mmcs_2303 protein of unknown function DUF885 YP_001135050.1 KEGG: mmc:Mmcs_2301 hypothetical protein YP_001135051.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family YP_001135052.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2 YP_001135053.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2298 acyl-CoA dehydrogenase-like protein YP_001135054.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_2600 acyl-CoA dehydrogenase domain protein YP_001135055.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmc:Mmcs_2296 radical SAM YP_001135056.1 KEGG: mmc:Mmcs_5266 putative helicase YP_001135057.1 KEGG: mmc:Mmcs_2292 putative conserved membrane protein YP_001135058.1 PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_2291 extracellular ligand-binding receptor YP_001135059.1 PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_2290 inner-membrane translocator YP_001135060.1 PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_2289 inner-membrane translocator YP_001135061.1 PFAM: ABC transporter related; KEGG: mmc:Mmcs_2288 ABC transporter related YP_001135062.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_2592 ABC transporter-related protein YP_001135063.1 KEGG: mgm:Mmc1_3694 putative outer membrane adhesin like protein YP_001135064.1 KEGG: mmc:Mmcs_2648 hypothetical protein YP_001135065.1 PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_2642 RNA polymerase, sigma 28 subunit YP_001135066.1 KEGG: mkm:Mkms_2689 conserved hypothetical protein YP_001135067.1 KEGG: mmc:Mmcs_2646 hypothetical protein YP_001135069.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001135070.1 PFAM: beta-lactamase domain protein; KEGG: mmc:Mmcs_2284 beta-lactamase-like protein YP_001135071.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mva:Mvan_2588 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001135072.1 KEGG: mmc:Mmcs_2280 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region YP_001135073.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001135074.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mmc:Mmcs_2278 extracellular solute-binding protein, family 5 YP_001135075.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001135076.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001135077.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_001135078.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_001135079.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation YP_001135080.1 KEGG: mmc:Mmcs_1485 cytochrome P450 YP_001135081.1 KEGG: mmc:Mmcs_2272 hypothetical protein YP_001135082.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_0356 diguanylate cyclase YP_001135083.1 PFAM: protein of unknown function DUF1304; KEGG: rha:RHA1_ro02814 hypothetical protein YP_001135084.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001135085.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001135086.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001135087.1 KEGG: mva:Mvan_2572 hypothetical protein YP_001135088.1 PFAM: protein of unknown function DUF28; KEGG: mmc:Mmcs_2251 protein of unknown function DUF28 YP_001135089.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mpa:MAP0150c putative acyl-CoA dehydrogenase YP_001135090.2 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_001135091.1 KEGG: mva:Mvan_2565 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_001135092.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_001135093.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_2247 NUDIX hydrolase YP_001135094.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_2246 phosphatidyl-myo-inositol alpha-mannosyltransferase YP_001135095.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_001135096.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2244 CDP-alcohol phosphatidyltransferase YP_001135097.1 PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_2243 histidine triad (HIT) protein YP_001135098.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001135099.1 KEGG: mmc:Mmcs_2241 hypothetical protein YP_001135100.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2240 thioesterase superfamily YP_001135101.1 KEGG: mmc:Mmcs_2239 hypothetical protein YP_001135102.1 PFAM: GAF domain protein; ANTAR domain protein; KEGG: mva:Mvan_2553 response regulator receiver and ANTAR domain protein YP_001135104.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_4125 putative signal transduction histidine kinase YP_001135105.1 KEGG: mva:Mvan_2550 conserved hypothetical protein YP_001135106.1 PFAM: UspA domain protein; KEGG: mbo:Mb2053c hypothetical protein YP_001135107.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_4126 two component transcriptional regulator, LuxR family YP_001135108.1 KEGG: mpa:MAP1746c hypothetical protein YP_001135109.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rha:RHA1_ro04274 probable alpha-glucosidase YP_001135111.1 PFAM: extracellular solute-binding protein, family 1; KEGG: noc:Noc_0282 extracellular solute-binding protein, family 1 YP_001135112.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_2543 binding-protein-dependent transport systems inner membrane component YP_001135113.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit YP_001135114.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro05991 ABC sugar transporter, ATP-binding component YP_001135115.1 KEGG: mmc:Mmcs_1247 hypothetical protein YP_001135116.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_2892 alpha/beta hydrolase fold YP_001135117.1 KEGG: mmc:Mmcs_2893 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein YP_001135118.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; TOBE domain protein; KEGG: mva:Mvan_2539 DNA binding domain, excisionase family YP_001135119.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rha:RHA1_ro03638 molybdate transporter, molybdate-binding protein YP_001135120.1 TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_3747 NifC-like ABC-type porter YP_001135121.1 PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_2536 ABC transporter-related protein YP_001135122.1 PFAM: acyltransferase 3; KEGG: mmc:Mmcs_3079 acyltransferase 3 YP_001135123.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: rxy:Rxyl_2342 acetoacetyl-CoA synthase YP_001135124.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mmc:Mmcs_1735 PE-PPE-like protein YP_001135125.1 PFAM: ribonuclease BN; KEGG: mmc:Mmcs_0352 ribonuclease BN YP_001135127.1 PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_5201 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001135128.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_4123 NAD-dependent epimerase/dehydratase YP_001135129.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rha:RHA1_ro02920 tRNA processing ribonuclease BN YP_001135130.1 KEGG: mkm:Mkms_0142 conserved hypothetical protein YP_001135131.1 PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1281 RNA polymerase, sigma 28 subunit YP_001135132.1 PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mbb:BCG_3315c putative RNA polymerase sigma factor SigF YP_001135133.1 KEGG: rha:RHA1_ro00091 hypothetical protein YP_001135134.1 KEGG: rha:RHA1_ro00093 hypothetical protein YP_001135135.1 KEGG: rha:RHA1_ro00094 possible sugar transferase YP_001135136.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family YP_001135137.1 PFAM: response regulator receiver; KEGG: mmc:Mmcs_2690 response regulator receiver protein YP_001135138.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2898 anti-sigma-factor antagonist YP_001135139.1 KEGG: msm:MSMEG_1076 hypothetical protein YP_001135140.1 PFAM: CsbD family protein; KEGG: nfa:nfa43340 hypothetical protein YP_001135141.1 PFAM: periplasmic binding protein; KEGG: sco:SCO0996 putative lipoprotein YP_001135142.1 PFAM: transport system permease protein; KEGG: sco:SCO0997 Fe uptake system integral membrane protein YP_001135143.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0998 Fe uptake system permease YP_001135144.1 KEGG: mmc:Mmcs_1464 hypothetical protein YP_001135145.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_5319 ATPase, P type cation/copper-transporter YP_001135146.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_1439 two component transcriptional regulator, winged helix family YP_001135147.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_1438 periplasmic sensor signal transduction histidine kinase YP_001135148.1 PFAM: protein of unknown function DUF305; KEGG: mmc:Mmcs_1437 protein of unknown function DUF305 YP_001135149.1 KEGG: bja:bll1412 hypothetical protein YP_001135151.1 KEGG: nfa:nfa2550 putative phage head YP_001135152.1 KEGG: mva:Mvan_4362 hypothetical protein YP_001135156.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gme:Gmet_0936 HNH endonuclease YP_001135157.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; KEGG: mtc:MT2734 gene 36 protein, putative YP_001135158.1 PFAM: phage integrase family protein; KEGG: mtc:MT2735 integrase YP_001135159.1 KEGG: mmc:Mmcs_1470 hypothetical protein YP_001135160.1 KEGG: mmc:Mmcs_4188 cation efflux protein YP_001135161.1 PFAM: regulatory protein, ArsR; KEGG: nfa:nfa26300 putative transcriptional regulator YP_001135162.1 KEGG: mmc:Mmcs_5105 hypothetical protein YP_001135163.1 KEGG: mmc:Mmcs_2890 hypothetical protein YP_001135164.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_2227 transcriptional regulator, AraC family YP_001135165.1 KEGG: mmc:Mmcs_2226 hypothetical protein YP_001135166.1 PFAM: Clp N terminal domain protein; KEGG: rha:RHA1_ro00243 probable ATP-dependent Clp protease ATP-binding subunit YP_001135167.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_2224 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001135168.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein; KEGG: mva:Mvan_2495 methylated-DNA--protein-cysteine methyltransferase YP_001135169.1 KEGG: mmc:Mmcs_2222 hypothetical protein YP_001135170.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_2221 GCN5-related N-acetyltransferase YP_001135171.1 PFAM: AFG1-family ATPase; KEGG: mva:Mvan_2491 AFG1-family ATPase YP_001135172.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mmc:Mmcs_2219 bifunctional deaminase-reductase-like protein YP_001135173.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mva:Mvan_2489 TAP domain protein YP_001135174.1 KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein YP_001135175.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mmc:Mmcs_2216 protein-methionine-S-oxide reductase YP_001135176.1 PFAM: Chlorite dismutase; KEGG: mmc:Mmcs_2214 chlorite dismutase YP_001135177.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_001135178.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_001135179.1 KEGG: mmc:Mmcs_2211 hypothetical protein YP_001135180.1 PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease YP_001135181.1 KEGG: mva:Mvan_2478 secretory lipase YP_001135182.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001135183.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_001135184.1 PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: mmc:Mmcs_2199 deoxyribonuclease/rho motif-related TRAM YP_001135185.1 KEGG: mmc:Mmcs_2198 amino acid permease-associated region YP_001135186.1 PFAM: TrkA-N domain protein; KEGG: mmc:Mmcs_2197 TrkA-N YP_001135187.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mmc:Mmcs_2196 TrkA-N YP_001135188.1 KEGG: mva:Mvan_2471 conserved hypothetical protein YP_001135189.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmc:Mmcs_2194 nucleic acid binding, OB-fold, tRNA/helicase-type YP_001135190.1 KEGG: mmc:Mmcs_2193 hypothetical protein YP_001135191.1 KEGG: mtc:MT2770 hypothetical protein YP_001135192.1 catalyzes the formation of dUMP from dUTP YP_001135193.1 KEGG: mva:Mvan_2466 putative conserved alanine rich transmembrane protein YP_001135194.1 KEGG: mmc:Mmcs_2189 hypothetical protein YP_001135195.1 KEGG: mmc:Mmcs_2188 hypothetical protein YP_001135196.1 PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_2187 inositol-1(or 4)-monophosphatase YP_001135197.1 PFAM: ROK family protein; KEGG: mva:Mvan_2462 polyphosphate--glucose phosphotransferase YP_001135198.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released YP_001135199.1 PFAM: O-methyltransferase, family 2; KEGG: mmc:Mmcs_2184 O-methyltransferase, family 2 YP_001135200.1 KEGG: mmc:Mmcs_2675 hypothetical protein YP_001135201.1 PFAM: Endoribonuclease L-PSP; KEGG: mmc:Mmcs_2183 endoribonuclease L-PSP YP_001135202.1 PFAM: protein of unknown function DUF952; KEGG: mva:Mvan_2456 protein of unknown function DUF952 YP_001135203.1 KEGG: mmc:Mmcs_2181 hypothetical protein YP_001135204.1 PFAM: ribonuclease BN; KEGG: mmc:Mmcs_2180 ribonuclease BN YP_001135205.1 KEGG: mva:Mvan_2453 conserved hypothetical protein YP_001135206.1 KEGG: mmc:Mmcs_2178 hypothetical protein YP_001135207.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase YP_001135208.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: mva:Mvan_2450 iron dependent repressor YP_001135209.1 KEGG: mva:Mvan_2449 conserved hypothetical protein YP_001135210.1 PFAM: protein of unknown function DUF75; KEGG: mmc:Mmcs_2173 protein of unknown function DUF75 YP_001135211.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_2172 alpha/beta hydrolase fold YP_001135212.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mbo:Mb2735 hypothetical protein YP_001135213.1 PFAM: ATP-cone domain protein; KEGG: mmc:Mmcs_2170 ribonucleotide reductase regulator NrdR-like protein YP_001135214.1 PFAM: Peptidoglycan-binding LysM; KEGG: mva:Mvan_2442 peptidoglycan-binding LysM YP_001135215.1 Represses a number of genes involved in the response to DNA damage YP_001135216.1 PFAM: LGFP repeat protein; KEGG: mmc:Mmcs_2167 LGFP YP_001135217.1 TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mmc:Mmcs_2166 molybdopterin guanine dinucleotide-containing S/N-oxide reductase YP_001135218.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mva:Mvan_2437 DEAD/DEAH box helicase domain protein YP_001135219.1 PFAM: GTP-binding protein, HSR1-related; KEGG: mmc:Mmcs_2164 GTP-binding protein, HSR1-related YP_001135220.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_001135221.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001135222.1 KEGG: mmc:Mmcs_2161 conserved hypothetical alanine rich protein YP_001135223.1 KEGG: mmc:Mmcs_2160 hypothetical protein YP_001135224.1 PFAM: protein of unknown function DUF349; KEGG: mmc:Mmcs_2159 protein of unknown function DUF349 YP_001135225.1 KEGG: mmc:Mmcs_2158 putative conserved transmembrane protein YP_001135226.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001135227.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2156 ABC transporter related YP_001135228.1 PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_2155 extracellular solute-binding protein, family 3 YP_001135229.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2154 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001135230.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_2425 polar amino acid ABC transporter, inner membrane subunit YP_001135231.1 PFAM: protein of unknown function DUF1622; KEGG: mmc:Mmcs_2152 protein of unknown function DUF1622 YP_001135232.1 KEGG: mmc:Mmcs_2151 hypothetical protein YP_001135233.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_001135234.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_001135235.1 PFAM: alpha/beta hydrolase fold; dienelactone hydrolase; KEGG: mva:Mvan_2419 alpha/beta hydrolase fold YP_001135236.1 PFAM: hydrogenase expression/synthesis, HypA; KEGG: mmc:Mmcs_2146 hydrogenase nickel insertion protein HypA YP_001135237.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: mmc:Mmcs_2145 hydrogenase accessory protein HypB YP_001135238.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: mmc:Mmcs_2136 (NiFe) hydrogenase maturation protein HypF YP_001135239.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mmc:Mmcs_2135 hydrogenase assembly chaperone HypC/HupF YP_001135240.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mva:Mvan_2405 hydrogenase expression/formation protein HypD YP_001135241.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mmc:Mmcs_2133 hydrogenase expression/formation protein HypE YP_001135242.1 KEGG: mmc:Mmcs_2130 hypothetical protein YP_001135243.1 KEGG: mmc:Mmcs_2129 UDP-glucuronosyl/UDP-glucosyltransferase YP_001135244.1 PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2128 limonene-1,2-epoxide hydrolase YP_001135245.1 KEGG: mva:Mvan_2399 putative conserved membrane alanine rich protein YP_001135246.1 PFAM: PspA/IM30 family protein; KEGG: mmc:Mmcs_2126 phage shock protein A, PspA YP_001135247.1 PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_2125 transcriptional regulator, XRE family YP_001135248.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mmc:Mmcs_2123 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001135249.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis YP_001135250.1 PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: mbo:Mb1693 possible chalcone synthase pks11 YP_001135251.1 PFAM: UbiA prenyltransferase; KEGG: fal:FRAAL6457 putative integral membrane protein YP_001135252.1 PFAM: O-methyltransferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_6628 putative O-methyltransferase YP_001135253.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mmc:Mmcs_2121 cell division FtsK/SpoIIIE YP_001135254.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mva:Mvan_2392 antibiotic biosynthesis monooxygenase YP_001135255.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001135256.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mva:Mvan_2390 putative methyltransferase YP_001135257.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tfu:Tfu_1330 response regulator receiver YP_001135258.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mpa:MAP2863c hypothetical protein YP_001135259.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001135260.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor YP_001135261.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mva:Mvan_2385 diguanylate cyclase YP_001135262.1 KEGG: abo:ABO_2415 haloallkane dehalogenase YP_001135263.1 PFAM: protein of unknown function DUF1006; KEGG: mmc:Mmcs_2114 protein of unknown function DUF1006 YP_001135264.1 PFAM: dihydrofolate reductase region; KEGG: mmc:Mmcs_2113 dihydrofolate reductase YP_001135265.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_001135266.1 PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_2111 dienelactone hydrolase YP_001135267.1 PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_5204 HpcH/HpaI aldolase YP_001135268.1 KEGG: mva:Mvan_2377 conserved hypothetical protein YP_001135269.1 KEGG: mpa:MAP2876c hypothetical protein YP_001135270.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mmc:Mmcs_2108 tetratricopeptide TPR_2 YP_001135271.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001135272.1 PFAM: protein of unknown function DUF222; KEGG: mva:Mvan_3379 protein of unknown function DUF222 YP_001135273.1 KEGG: mmc:Mmcs_4453 hypothetical protein YP_001135274.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_2105 transcriptional regulator, AsnC family YP_001135275.1 KEGG: mmc:Mmcs_2104 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein YP_001135276.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL0383 putative hydroxylase YP_001135277.1 PFAM: SEC-C motif domain protein; KEGG: mmc:Mmcs_2103 sec-C motif containing protein YP_001135278.1 KEGG: mva:Mvan_2353 conserved hypothetical protein YP_001135279.1 PFAM: beta-lactamase; KEGG: mmc:Mmcs_2102 twin-arginine translocation pathway signal YP_001135280.1 PFAM: peptidase M16 domain protein; KEGG: mmc:Mmcs_2101 peptidase M16-like protein YP_001135281.1 KEGG: mmc:Mmcs_2100 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein YP_001135282.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001135283.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_001135284.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: mva:Mvan_2347 iron dependent repressor YP_001135285.1 KEGG: mmc:Mmcs_2680 hypothetical protein YP_001135286.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_001135287.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mmc:Mmcs_2094 4'-phosphopantetheinyl transferase YP_001135288.1 PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_2093 metallophosphoesterase YP_001135289.1 KEGG: mva:Mvan_2326 conserved hypothetical protein YP_001135290.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: mmc:Mmcs_2091 peptidase S15 YP_001135291.1 KEGG: mtc:MT2895.1 hypothetical protein YP_001135292.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001135293.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mkm:Mkms_2132 methyltransferase type 11 YP_001135294.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mmc:Mmcs_2085 MATE efflux family protein YP_001135295.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: mmc:Mmcs_2084 phosphoesterase, RecJ-like protein YP_001135296.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001135297.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001135298.1 PFAM: protein of unknown function DUF448; KEGG: mmc:Mmcs_2081 protein of unknown function DUF448 YP_001135299.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_001135300.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_001135301.1 KEGG: mbo:Mb2868 probable conserved transmembrane alanine rich protein YP_001135302.1 KEGG: mmc:Mmcs_2077 conserved hypothetical alanine rich protein YP_001135303.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001135304.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2075 major facilitator superfamily MFS_1 YP_001135305.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmc:Mmcs_2074 uroporphyrin-III C-methyltransferase YP_001135306.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_001135307.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_001135308.1 KEGG: mmc:Mmcs_2071 ATPase associated with various cellular activities, AAA_5; PFAM: magnesium chelatase, ChlI subunit; von Willebrand factor, type A; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase YP_001135309.1 KEGG: mmc:Mmcs_2070 GCN5-related N-acetyltransferase YP_001135310.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_001135311.1 KEGG: mmc:Mmcs_2068 hypothetical protein YP_001135312.1 catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide YP_001135313.1 KEGG: mmc:Mmcs_2066 ABC transporter related; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001135314.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mmc:Mmcs_2065 cobalt ABC transporter CbiQ, permease subunit YP_001135315.1 KEGG: mmc:Mmcs_2064 hypothetical protein YP_001135316.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mmc:Mmcs_2063 cobalamin (vitamin B12) biosynthesis CbiM protein YP_001135317.1 PFAM: regulatory protein, ArsR; KEGG: mmc:Mmcs_2062 transcriptional regulator, ArsR family YP_001135318.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rha:RHA1_ro07034 methyltransferase YP_001135319.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_2061 GntR-like protein YP_001135320.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2060 short-chain dehydrogenase/reductase SDR YP_001135321.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2059 betaine-aldehyde dehydrogenase YP_001135322.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mmc:Mmcs_2058 peptidase C26 YP_001135323.1 PFAM: glutamine synthetase, catalytic region; KEGG: mmc:Mmcs_2057 glutamate--ammonia ligase YP_001135324.1 KEGG: mmc:Mmcs_2055 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase YP_001135325.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_2054 GCN5-related N-acetyltransferase YP_001135326.1 KEGG: mmc:Mmcs_2053 hypothetical protein YP_001135327.1 KEGG: mmc:Mmcs_2052 hypothetical protein YP_001135328.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential YP_001135329.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2049 phenylacetic acid degradation-related protein YP_001135330.1 PFAM: regulatory protein, TetR YP_001135331.1 KEGG: mpa:MAP4305 hypothetical protein YP_001135332.1 KEGG: mpa:MAP4306 hypothetical protein YP_001135333.1 PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_2048 protein of unknown function DUF1707 YP_001135334.1 PFAM: penicillin-binding protein, transpeptidase; NTF2 domain protein N-terminal transpeptidase; KEGG: mmc:Mmcs_2047 penicillin-binding protein, transpeptidase YP_001135336.1 PFAM: Integrase, catalytic region; KEGG: fra:Francci3_1958 integrase YP_001135337.1 KEGG: mmc:Mmcs_2046 hypothetical protein YP_001135338.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_2045 GCN5-related N-acetyltransferase YP_001135339.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001135340.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: mmc:Mmcs_2043 peptidase M50 YP_001135341.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001135342.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_2041 beta-Ig-H3/fasciclin YP_001135343.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mmc:Mmcs_2040 beta-Ig-H3/fasciclin YP_001135344.1 PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: mmc:Mmcs_2038 deoxyribodipyrimidine photolyase YP_001135345.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rha:RHA1_ro00374 probable carveol dehydrogenase YP_001135346.1 KEGG: mmc:Mmcs_2037 putative conserved transmembrane protein YP_001135347.1 KEGG: mmc:Mmcs_2036 hypothetical protein YP_001135348.1 KEGG: mpa:MAP3588 hypothetical protein YP_001135349.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_2034 protein of unknown function UPF0089 YP_001135350.1 PFAM: protein of unknown function DUF427; KEGG: mpa:MAP3586c hypothetical protein YP_001135351.1 PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_4850 acyl-CoA thioesterase YP_001135352.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpa:MAP3803 hypothetical protein YP_001135353.1 KEGG: nfa:nfa11900 hypothetical protein YP_001135354.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4573 transcriptional regulator, TetR family YP_001135355.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_2032 luciferase-like protein YP_001135356.1 PFAM: luciferase family protein; KEGG: mva:Mvan_2247 luciferase family protein YP_001135357.1 PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_4022 protein of unknown function DUF222 YP_001135358.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_2030 acyl-CoA dehydrogenase-like protein YP_001135359.1 KEGG: mmc:Mmcs_2029 hypothetical protein YP_001135360.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_2028 alpha/beta hydrolase fold-3 YP_001135361.1 KEGG: mmc:Mmcs_2024 cyclohexanone monooxygenase YP_001135362.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2023 short-chain dehydrogenase/reductase SDR YP_001135363.1 PFAM: HpcH/HpaI aldolase; KEGG: mva:Mvan_2241 HpcH/HpaI aldolase YP_001135364.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2021 alcohol dehydrogenase, zinc-binding protein YP_001135365.1 KEGG: mmc:Mmcs_2020 cytochrome P450 YP_001135366.1 KEGG: mmc:Mmcs_2019 hypothetical protein YP_001135367.1 PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mpa:MAP3581c hypothetical protein YP_001135368.1 KEGG: mmc:Mmcs_2017 hypothetical protein YP_001135369.1 KEGG: mva:Mvan_2235 putative ferredoxin YP_001135370.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2013 transcriptional regulator, TetR family YP_001135371.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0932c hypothetical protein YP_001135372.1 KEGG: mpa:MAP3547c hypothetical protein YP_001135373.1 KEGG: mpa:MAP3549 hypothetical protein YP_001135374.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_2012 L-carnitine dehydratase/bile acid-inducible protein F YP_001135375.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: mmc:Mmcs_2011 aminoglycoside phosphotransferase YP_001135376.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2010 transcriptional regulator, TetR family YP_001135377.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2008 aldehyde dehydrogenase YP_001135378.1 KEGG: mmc:Mmcs_2007 hypothetical protein YP_001135379.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_001135380.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mkm:Mkms_2051 phosphatidate cytidylyltransferase YP_001135381.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001135382.1 Catalyzes the phosphorylation of UMP to UDP YP_001135383.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_001135384.1 PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_1999 amino acid permease-associated region YP_001135385.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_1998 ABC transporter related YP_001135386.1 PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1997 protein of unknown function DUF214 YP_001135387.1 PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1996 protein of unknown function DUF214 YP_001135388.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001135389.1 PFAM: sugar transferase; KEGG: mmc:Mmcs_3584 undecaprenyl-phosphate galactosephosphotransferase YP_001135390.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001135391.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001135392.1 PFAM: peptidase M23B; KEGG: mmc:Mmcs_1992 peptidase M23B YP_001135393.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001135394.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mmc:Mmcs_1989 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001135395.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: mmc:Mmcs_1988 FAD-binding 9, siderophore-interacting YP_001135396.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mkm:Mkms_2033 DNA protecting protein DprA YP_001135397.1 KEGG: mpa:MAP2962c magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase YP_001135398.1 PFAM: protein of unknown function UPF0102; KEGG: mmc:Mmcs_1985 protein of unknown function UPF0102 YP_001135399.1 PFAM: protein of unknown function DUF1206; KEGG: mmc:Mmcs_1983 protein of unknown function DUF1206 YP_001135400.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1979 AMP-dependent synthetase and ligase YP_001135401.1 PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_1978 acyl-CoA thioesterase YP_001135402.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1977 L-carnitine dehydratase/bile acid-inducible protein F YP_001135403.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_2552 cytochrome P450 YP_001135404.1 KEGG: mkm:Mkms_2596 conserved hypothetical protein YP_001135405.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2550 transcriptional regulator, TetR family YP_001135406.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2549 short-chain dehydrogenase/reductase SDR YP_001135407.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_2544 cytochrome P450 YP_001135408.1 PFAM: cytochrome P450; KEGG: mpa:MAP2649c hypothetical protein YP_001135409.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2541 short-chain dehydrogenase/reductase SDR YP_001135410.1 KEGG: mkm:Mkms_2585 conserved hypothetical protein YP_001135411.1 KEGG: mmc:Mmcs_2539 hypothetical protein YP_001135412.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_2538 ATPase associated with various cellular activities, AAA_5 YP_001135413.1 PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2537 von Willebrand factor, type A YP_001135414.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2535 short-chain dehydrogenase/reductase SDR YP_001135415.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2658 hypothetical protein YP_001135416.1 KEGG: mmc:Mmcs_2531 dihydrodipicolinate reductase YP_001135417.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mva:Mvan_2851 virulence factor Mce family protein YP_001135418.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP0760 hypothetical protein YP_001135419.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_3669 mammalian cell entry YP_001135420.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0278 mammalian cell entry YP_001135421.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_2533 mammalian cell entry YP_001135422.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP2194 hypothetical protein YP_001135423.1 KEGG: mpa:MAP0766c hypothetical protein YP_001135424.1 KEGG: mva:Mvan_2195 conserved hypothetical protein YP_001135425.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001135426.1 KEGG: mmc:Mmcs_1971 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B YP_001135427.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001135428.1 KEGG: mva:Mvan_2191 putative conserved alanine rich lipoprotein LppW YP_001135429.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001135430.1 Essential for efficient processing of 16S rRNA YP_001135431.1 KEGG: mmc:Mmcs_1966 hypothetical protein YP_001135432.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001135433.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cgb:cg0275 Mg2+ transporter YP_001135434.1 KEGG: mpa:MAP1750 hypothetical protein YP_001135435.1 KEGG: mva:Mvan_2185 conserved hypothetical protein YP_001135436.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1962 serine-type D-Ala-D-Ala carboxypeptidase YP_001135437.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1961 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_001135438.1 PFAM: amidohydrolase; KEGG: mmc:Mmcs_1960 amidohydrolase YP_001135439.1 KEGG: mmc:Mmcs_1959 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase YP_001135440.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK YP_001135441.1 PFAM: nitrogen regulatory protein P-II; KEGG: mmc:Mmcs_1957 nitrogen regulatory protein P-II YP_001135442.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mmc:Mmcs_1956 ammonium transporter YP_001135443.1 KEGG: mmc:Mmcs_1955 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase YP_001135444.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_001135445.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: mmc:Mmcs_1953 chromosome segregation protein SMC YP_001135446.1 catalyzes the hydrolysis of acylphosphate YP_001135447.1 PFAM: OsmC family protein; KEGG: mmc:Mmcs_1951 OsmC-like protein YP_001135448.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001135449.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_001135450.1 PFAM: protein of unknown function DUF177; KEGG: mmc:Mmcs_1948 protein of unknown function DUF177 YP_001135451.1 KEGG: mmc:Mmcs_1947 hypothetical protein YP_001135452.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_1946 hemerythrin HHE cation binding region YP_001135453.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001135454.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: mbo:Mb2990c possible methyltransferase (methylase) YP_001135455.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_001135456.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: mva:Mvan_6052 transposase IS116/IS110/IS902 family protein YP_001135457.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mmc:Mmcs_4926 transposase IS116/IS110/IS902 YP_001135458.1 PFAM: Vitamin K epoxide reductase; KEGG: mmc:Mmcs_1942 vitamin K epoxide reductase YP_001135459.1 KEGG: mmc:Mmcs_1941 hypothetical protein YP_001135460.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_1940 alpha/beta hydrolase fold-3 YP_001135461.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region YP_001135462.1 PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_1938 2,5-didehydrogluconate reductase YP_001135463.1 KEGG: mva:Mvan_2160 conserved hypothetical protein YP_001135464.1 PFAM: Propeptide, PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: rha:RHA1_ro03324 possible Fe-regulated membrane protein YP_001135465.1 PFAM: protein of unknown function DUF461; KEGG: mmc:Mmcs_1601 protein of unknown function DUF461 YP_001135466.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mmc:Mmcs_1602 Dyp-type peroxidase YP_001135468.1 KEGG: mkm:Mkms_1983 conserved hypothetical protein YP_001135469.1 catalyzes branch migration in Holliday junction intermediates YP_001135470.1 PFAM: Dak phosphatase; KEGG: mmc:Mmcs_1935 Dak phosphatase YP_001135471.1 required for 70S ribosome assembly YP_001135472.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_001135473.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP YP_001135474.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1931 putative transcriptional regulator, AsnC family YP_001135475.1 KEGG: mmc:Mmcs_1930 putative conserved secreted protein YP_001135476.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001135477.1 catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine YP_001135478.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001135479.1 PFAM: protein of unknown function DUF121; KEGG: mbo:Mb3007 conserved hypothetical alanine rich protein YP_001135480.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001135481.1 PFAM: NUDIX hydrolase; Phosphoglycerate mutase; KEGG: mva:Mvan_2138 NUDIX hydrolase YP_001135482.1 PFAM: histone family protein DNA-binding protein; KEGG: mbo:Mb3010c probable DNA-binding protein HU homolog HupB (histone-like protein) (HLP) (21-kDa laminin-2-binding protein) YP_001135483.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001135484.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001135485.1 PFAM: regulatory proteins, IclR; sugar transporter superfamily protein; KEGG: mmc:Mmcs_1920 transcriptional regulator, IclR family YP_001135486.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001135487.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mva:Mvan_2132 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001135488.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1916 major facilitator superfamily MFS_1 YP_001135489.1 KEGG: mmc:Mmcs_1912 hypothetical protein YP_001135490.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001135491.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_001135492.1 KEGG: mva:Mvan_2127 conserved hypothetical protein YP_001135493.1 KEGG: mmc:Mmcs_5226 putative conserved integral membrane alanine and leucine rich protein YP_001135494.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001135495.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_001135496.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_001135497.1 KEGG: mmc:Mmcs_1905 low molecular weight protein antigen 6 (CFP-6) YP_001135498.1 PFAM: DoxX family protein; KEGG: mmc:Mmcs_1904 DoxX YP_001135499.1 KEGG: mmc:Mmcs_1903 LppZ YP_001135500.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_2995 periplasmic sensor signal transduction histidine kinase YP_001135501.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001135502.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_001135503.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001135504.1 PFAM: amino acid-binding ACT domain protein; KEGG: mmc:Mmcs_1889 amino acid-binding ACT YP_001135505.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_001135506.1 KEGG: mmc:Mmcs_1880 phosphoribosylglycinamide formyltransferase protein YP_001135507.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1879 AMP-dependent synthetase and ligase YP_001135508.1 KEGG: chu:CHU_2879 two-component sensor histidine kinase, sensor for ArcA; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001135509.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: mmc:Mmcs_1878 methionine synthase, vitamin-B12 independent YP_001135510.1 KEGG: mmc:Mmcs_1877 LpqA YP_001135511.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001135512.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mmc:Mmcs_1875 aminotransferase, class V YP_001135513.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_1874 phospholipid/glycerol acyltransferase YP_001135514.1 KEGG: mpa:MAP3059c hypothetical protein YP_001135515.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: mmc:Mmcs_1871 electron transfer flavoprotein, alpha subunit YP_001135516.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: mmc:Mmcs_1870 electron transfer flavoprotein beta-subunit YP_001135517.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1869 methyltransferase type 11 YP_001135518.1 PFAM: glycoside hydrolase, family 57; KEGG: mva:Mvan_2097 glycoside hydrolase, family 57 YP_001135519.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3064 hypothetical protein YP_001135520.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001135521.1 KEGG: mpa:MAP3082c hypothetical protein YP_001135522.1 PFAM: Pyrrolo-quinoline quinone; KEGG: mmc:Mmcs_1863 hypothetical protein YP_001135523.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: mmc:Mmcs_1862 amino acid carrier protein YP_001135524.1 KEGG: mmc:Mmcs_1861 immunogenic protein MPB64/MPT64 precursor YP_001135525.1 KEGG: mmc:Mmcs_1860 hypothetical protein YP_001135526.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1859 methyltransferase type 11 YP_001135527.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001135528.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_1857 NUDIX hydrolase YP_001135529.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_2087 ABC transporter-related protein YP_001135530.1 KEGG: sco:SCO0723 hypothetical protein YP_001135531.1 PFAM: protein of unknown function DUF161; KEGG: mmc:Mmcs_1855 protein of unknown function DUF161 YP_001135532.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: mmc:Mmcs_1854 transcriptional regulator, GntR family YP_001135533.1 KEGG: mmc:Mmcs_1853 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3 YP_001135534.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mmc:Mmcs_1852 cytochrome-c oxidase YP_001135535.1 PFAM: periplasmic binding protein; KEGG: mmc:Mmcs_1851 periplasmic binding protein YP_001135536.1 PFAM: alanine dehydrogenase/PNT domain protein; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1836 alcohol dehydrogenase GroES-like protein YP_001135537.1 KEGG: mbo:Mb3072c hypothetical protein YP_001135538.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_1508 transcriptional regulator, TetR family YP_001135539.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_1485 cytochrome P450 YP_001135540.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11094 possible transposase (mutator type) YP_001135543.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_001135544.1 KEGG: mbo:Mb3075c probable monooxygenase YP_001135545.1 PFAM: regulatory protein, LuxR; metal-dependent phosphohydrolase, HD sub domain; Bacterio-opsin activator, HTH domain protein; KEGG: mva:Mvan_2058 metal dependent phosphohydrolase YP_001135546.1 KEGG: mpa:MAP3353c hypothetical protein YP_001135547.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1827 transcriptional regulator, TetR family YP_001135548.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1826 geranylgeranyl reductase YP_001135549.1 KEGG: F11C1.180; expressed protein YP_001135550.1 KEGG: fal:FRAAL1866 hypothetical protein; putative ryanodine receptor domain YP_001135551.1 PFAM: Patatin; KEGG: par:Psyc_1374 probable patatin-related protein YP_001135552.1 PFAM: WD-40 repeat protein; KEGG: dar:Daro_3599 WD-40 repeat YP_001135553.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1345 hypothetical protein YP_001135554.1 KEGG: mpa:MAP2723c hypothetical protein YP_001135555.1 KEGG: rha:RHA1_ro08289 possible transcriptional regulator YP_001135556.1 PFAM: Methyltransferase type 11; KEGG: mva:Mvan_2049 methyltransferase type 11 YP_001135558.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1436 ABC-type multidrug transport system ATPase component YP_001135559.1 PFAM: LysR, substrate-binding; KEGG: mmc:Mmcs_1820 transcriptional regulator, LysR family YP_001135560.1 KEGG: mva:Mvan_2044 conserved hypothetical protein YP_001135561.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cgb:cg1566 hypothetical protein YP_001135562.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001135563.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF YP_001135564.1 TIGRFAM: Glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: mva:Mvan_2040 glutaredoxin-like protein NrdH YP_001135565.1 PFAM: NADPH-dependent FMN reductase; KEGG: mmc:Mmcs_1814 NADPH-dependent FMN reductase YP_001135566.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1813 transcriptional regulator, TetR family YP_001135567.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001135568.1 PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein YP_001135569.1 KEGG: mva:Mvan_2035 conserved hypothetical protein YP_001135570.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1810 short-chain dehydrogenase/reductase SDR YP_001135571.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1809 transcriptional regulator, TetR family YP_001135572.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_1808 cytochrome P450 YP_001135573.1 KEGG: mmc:Mmcs_1807 hypothetical protein YP_001135574.1 PFAM: protein of unknown function DUF81; KEGG: mmc:Mmcs_1806 protein of unknown function DUF81 YP_001135575.1 PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_1805 aminoglycoside phosphotransferase YP_001135576.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1802 short-chain dehydrogenase/reductase SDR YP_001135577.1 PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mmc:Mmcs_1801 oxidoreductase, molybdopterin binding protein YP_001135578.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_001135579.1 PFAM: carbon starvation protein CstA; KEGG: mmc:Mmcs_1798 carbon starvation protein CstA YP_001135580.1 KEGG: mmc:Mmcs_1797 hypothetical protein YP_001135581.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein YP_001135582.1 PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein YP_001135583.1 KEGG: mmc:Mmcs_1795 putative oxidoreductase YP_001135584.1 PFAM: carboxyl transferase; KEGG: mpa:MAP2372 AccD4_2 YP_001135585.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_1793 luciferase-like protein YP_001135586.1 PFAM: protein of unknown function DUF1486; KEGG: mva:Mvan_2017 protein of unknown function DUF1486 YP_001135587.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: nfa:nfa25920 hypothetical protein YP_001135588.1 KEGG: mva:Mvan_2014 conserved hypothetical protein YP_001135589.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: mpa:MAP2376c hypothetical protein YP_001135590.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region YP_001135591.1 PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase YP_001135592.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_001135593.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1784 aldehyde dehydrogenase YP_001135594.1 KEGG: pma:Pro1156 uncharacterized membrane protein YP_001135595.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: xfa:XF2269 3-alpha-hydroxysteroid dehydrogenase YP_001135596.1 PFAM: cytochrome P450; KEGG: mva:Mvan_2007 cytochrome P450 YP_001135597.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1781 aldehyde dehydrogenase YP_001135598.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1780 L-carnitine dehydratase/bile acid-inducible protein F YP_001135599.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_2009 formate dehydrogenase YP_001135600.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3698 cytochrome P450 YP_001135601.1 KEGG: mmc:Mmcs_2017 hypothetical protein YP_001135602.1 PFAM: Thiolase; KEGG: mmc:Mmcs_1779 thiolase YP_001135603.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mva:Mvan_1998 acyl-CoA dehydrogenase domain protein YP_001135604.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP2386c hypothetical protein YP_001135605.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1776 amidohydrolase 2 YP_001135606.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_001135607.1 PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2 YP_001135608.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001135609.1 PFAM: dihydrodipicolinate synthetase; KEGG: mpa:MAP2392c hypothetical protein YP_001135610.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_1991 short-chain dehydrogenase/reductase SDR YP_001135611.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001135612.1 PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mpa:MAP2394 hypothetical protein YP_001135613.1 KEGG: mmc:Mmcs_1769 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase YP_001135614.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2395c hypothetical protein YP_001135615.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mpa:MAP2347 hypothetical protein YP_001135616.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mva:Mvan_1985 enoyl-CoA hydratase/isomerase YP_001135617.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2398 hypothetical protein YP_001135618.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1764 enoyl-CoA hydratase/isomerase YP_001135619.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1763 AMP-dependent synthetase and ligase YP_001135620.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35 YP_001135621.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_1980 AMP-dependent synthetase and ligase YP_001135622.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB0617 CaiB/BaiF family protein YP_001135623.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_1760 transcriptional regulator, GntR family YP_001135624.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1759 acyl-CoA dehydrogenase-like protein YP_001135625.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001135626.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001135627.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1756 acyl-CoA dehydrogenase-like protein YP_001135628.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2410 hypothetical protein YP_001135629.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1754 alpha/beta hydrolase fold YP_001135630.1 PFAM: flavin-containing monooxygenase FMO; KEGG: mmc:Mmcs_1752 dimethylaniline monooxygenase (N-oxide forming) YP_001135631.1 PFAM: MaoC domain protein dehydratase; KEGG: mva:Mvan_1970 MaoC domain protein dehydratase YP_001135632.1 KEGG: mmc:Mmcs_1750 hypothetical protein YP_001135633.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mmc:Mmcs_1749 UBA/ThiF-type NAD/FAD binding fold YP_001135634.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: mmc:Mmcs_1748 diguanylate cyclase/phosphodiesterase with GAF sensor YP_001135635.1 KEGG: mva:Mvan_1966 conserved hypothetical protein YP_001135636.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_1743 acyl-CoA dehydrogenase-like protein YP_001135637.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1742 acyl-CoA dehydrogenase-like protein YP_001135638.1 KEGG: mmc:Mmcs_1080 hypothetical protein YP_001135639.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_0719 UspA YP_001135640.1 KEGG: mpa:MAP3547c hypothetical protein YP_001135641.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_1961 transcriptional regulator, TetR family YP_001135642.1 KEGG: mpa:MAP3549 hypothetical protein YP_001135643.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpa:MAP3240 hypothetical protein YP_001135644.1 KEGG: mpa:MAP3237c hypothetical protein YP_001135645.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: mle:ML2302 putative Crp/Fnr-family transcriptional regulator YP_001135646.1 PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro00395 aldehyde dehydrogenase YP_001135647.1 KEGG: nfa:nfa45070 hypothetical protein YP_001135648.1 KEGG: mva:Mvan_1957 conserved hypothetical protein YP_001135649.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5921 transcriptional regulator, TetR family YP_001135650.1 PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: atc:AGR_pAT_267 hypothetical protein YP_001135651.1 KEGG: art:Arth_1074 coenzyme F390 synthetase-like protein YP_001135652.1 KEGG: art:Arth_4211 coenzyme F390 synthetase-like protein YP_001135653.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase YP_001135654.1 PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222 YP_001135655.1 PFAM: Carboxylesterase, type B; KEGG: sco:SCO6127 carboxylesterase YP_001135656.1 KEGG: mpa:MAP0290 hypothetical protein YP_001135657.1 KEGG: mmc:Mmcs_1895 hypothetical protein YP_001135658.1 KEGG: mav:MAV_0065 hypothetical protein YP_001135659.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_1898 luciferase-like protein YP_001135660.1 KEGG: mmc:Mmcs_5177 zinc/iron permease YP_001135661.1 KEGG: mmc:Mmcs_2601 hypothetical protein YP_001135662.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1729 major facilitator superfamily MFS_1 YP_001135663.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001135664.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001135665.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001135666.1 PFAM: protein of unknown function DUF190; KEGG: mva:Mvan_1947 protein of unknown function DUF190 YP_001135667.1 carries the fatty acid chain in fatty acid biosynthesis YP_001135668.1 converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis YP_001135669.1 KEGG: mmc:Mmcs_1721 hypothetical protein YP_001135670.1 KEGG: mmc:Mmcs_1720 hypothetical protein YP_001135671.1 KEGG: aor:AO090102000296 predicted protein YP_001135672.1 PFAM: protein of unknown function DUF808; KEGG: mmc:Mmcs_2667 protein of unknown function DUF808 YP_001135673.1 KEGG: mpa:MAP1644 hypothetical protein YP_001135674.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_2746 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001135675.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein YP_001135676.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: csa:Csal_0386 TRAP transporter solute receptor, TAXI family YP_001135677.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH0602 hypothetical protein YP_001135678.1 PFAM: DNA primase, small subunit; KEGG: mmc:Mmcs_5228 hypothetical protein YP_001135679.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP2077c hypothetical protein YP_001135680.1 KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein YP_001135681.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_5185 anti-sigma-factor antagonist YP_001135682.1 PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: mmc:Mmcs_5184 putative PAS/PAC sensor protein YP_001135683.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mbo:Mb3124c PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase) (triglyceride lipase) (tributyrase) YP_001135684.1 PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_5181 amino acid permease-associated region YP_001135685.1 KEGG: cef:CE1100 hypothetical protein YP_001135686.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_4772 luciferase-like protein YP_001135687.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: msm:MSMEG_3480 streptomycin 6-kinase (streptidine kinase) (streptomycin6-phosphotransferase) (APH(6)) YP_001135688.1 KEGG: ccr:CC1817 hypothetical protein YP_001135689.1 PFAM: cutinase; KEGG: mmc:Mmcs_5300 cutinase YP_001135690.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001135691.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rha:RHA1_ro03381 possible transcriptional regulator, AsnC family YP_001135692.1 KEGG: mva:Mvan_1923 conserved hypothetical protein YP_001135693.1 KEGG: fal:FRAAL3789 hypothetical protein; putative thioesterase/thiol ester dehydrase-isomerase domain YP_001135694.1 PFAM: Cupin domain protein; Cupin 2, conserved barrel domain protein; KEGG: rha:RHA1_ro00200 possible oxalate decarboxylase YP_001135696.1 PFAM: cutinase; KEGG: mpa:MAP1476c hypothetical protein YP_001135697.1 KEGG: mmc:Mmcs_3457 hypothetical protein YP_001135698.1 KEGG: rha:RHA1_ro00894 probable short chain dehydrogenase YP_001135699.1 KEGG: rha:RHA1_ro00749 hypothetical protein YP_001135700.1 PFAM: protein of unknown function DUF88; KEGG: mmc:Mmcs_0898 protein of unknown function DUF88 YP_001135701.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_1615 diguanylate cyclase/phosphodiesterase YP_001135702.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_1614 protein of unknown function DUF6, transmembrane YP_001135703.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001135704.1 PFAM: protein of unknown function DUF214; KEGG: mmc:Mmcs_1612 protein of unknown function DUF214 YP_001135705.1 KEGG: mmc:Mmcs_1611 cell division protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_001135706.1 KEGG: mmc:Mmcs_1610 hypothetical protein YP_001135707.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mkm:Mkms_1634 MscS mechanosensitive ion channel YP_001135708.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 YP_001135709.1 KEGG: mmc:Mmcs_1607 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001135710.1 KEGG: mle:ML0663 hypothetical protein YP_001135711.1 KEGG: mva:Mvan_1908 histidinol-phosphate phosphatase, putative; TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase YP_001135712.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1604 acyl-CoA dehydrogenase-like protein YP_001135713.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1603 acyl-CoA dehydrogenase-like protein YP_001135714.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sco:SCO1711 dehydrogenase YP_001135715.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02783 dehydrogenase YP_001135716.1 PFAM: putative esterase; KEGG: mmc:Mmcs_1596 putative esterase YP_001135717.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1595 putative transcriptional regulator, TetR family YP_001135718.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_1900 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001135719.1 KEGG: mmc:Mmcs_1593 hypothetical protein YP_001135720.1 PFAM: homogentisate 1,2-dioxygenase; KEGG: mmc:Mmcs_1591 homogentisate 1,2-dioxygenase YP_001135721.1 KEGG: mmc:Mmcs_1590 hypothetical protein YP_001135722.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1589 L-carnitine dehydratase/bile acid-inducible protein F YP_001135723.1 PFAM: pyruvate carboxyltransferase; KEGG: mmc:Mmcs_1588 pyruvate carboxyltransferase YP_001135724.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_1893 transcriptional regulator, TetR family YP_001135725.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1586 acyl-CoA dehydrogenase-like protein YP_001135726.1 PFAM: aminoglycoside phosphotransferase; KEGG: mmc:Mmcs_1585 aminoglycoside phosphotransferase YP_001135727.1 KEGG: mva:Mvan_1890 conserved hypothetical protein YP_001135728.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1583 methyltransferase type 11 YP_001135729.1 KEGG: mpa:MAP3198 hypothetical protein YP_001135730.1 KEGG: mva:Mvan_1237 conserved hypothetical protein YP_001135731.1 PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_4; KEGG: mmc:Mmcs_0780 transcriptional regulator, LuxR family YP_001135732.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: art:Arth_1255 FAD dependent oxidoreductase YP_001135733.1 KEGG: mxa:MXAN_4941 hypothetical protein YP_001135735.1 KEGG: mxa:MXAN_4939 hypothetical protein YP_001135736.1 PFAM: regulatory protein, LuxR; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: nfa:nfa53720 putative transcriptional regulator YP_001135737.1 SMART: response regulator receiver; KEGG: mmc:Mmcs_1581 response regulator receiver protein YP_001135738.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: mmc:Mmcs_1580 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_001135739.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001135740.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135741.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135742.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135743.1 KEGG: mmc:Mmcs_1575 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit YP_001135744.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135745.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135746.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135747.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135748.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135749.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001135750.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135751.1 Catalyzes the transfer of electrons from NADH to quinone YP_001135752.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001135753.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3192c probable transcriptional regulatory protein (probably TetR-family) YP_001135754.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP3224 hypothetical protein YP_001135755.1 KEGG: mpa:MAP3225 hypothetical protein YP_001135756.1 PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1558 FAD dependent oxidoreductase YP_001135757.1 KEGG: mmc:Mmcs_1557 hypothetical protein YP_001135758.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1556 amine oxidase (flavin-containing) YP_001135759.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1555 alpha/beta hydrolase fold YP_001135760.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1554 alcohol dehydrogenase, zinc-binding protein YP_001135761.1 PFAM: regulatory protein, LuxR; KEGG: mmc:Mmcs_0780 transcriptional regulator, LuxR family YP_001135762.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mbb:BCG_2019 putative 20-beta-hydroxysteroid dehydrogenase fabG3 YP_001135763.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2740 hypothetical protein YP_001135764.1 PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT3579 hydrolase, alpha/beta hydrolase fold family YP_001135765.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR; KEGG: mmc:Mmcs_4213 short-chain dehydrogenase/reductase SDR YP_001135766.1 KEGG: mmc:Mmcs_5298 hypothetical protein YP_001135767.1 KEGG: msm:MSMEG_3617 hypothetical protein YP_001135768.1 PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3544 isochorismatase hydrolase YP_001135769.1 KEGG: mmc:Mmcs_2274 4-aminobutyrate aminotransferase YP_001135770.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro02304 probable glutaryl-CoA dehydrogenase YP_001135771.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: mav:MAV_4962 sensory box histidine kinase YP_001135772.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_4945 amine oxidase YP_001135773.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mtc:MT1946 zinc-binding dehydrogenase YP_001135774.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mtu:Rv3822 hypothetical protein YP_001135775.1 PFAM: GAF domain protein; Stage II sporulation E family protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL5334 putative bacteriophytochrome (phytochrome-like protein) YP_001135776.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP2077c hypothetical protein YP_001135777.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein YP_001135778.1 PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ava:Ava_0989 ionotropic glutamate receptor YP_001135779.1 KEGG: bca:BCE_5388 hypothetical protein YP_001135780.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0325 major facilitator superfamily MFS_1 YP_001135781.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0323 alpha/beta hydrolase fold YP_001135782.1 PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3014 protein of unknown function DUF35 YP_001135783.1 KEGG: mmc:Mmcs_3015 lipid-transfer protein YP_001135784.1 KEGG: mva:Mvan_2861 conserved hypothetical protein YP_001135785.1 KEGG: mmc:Mmcs_0284 hypothetical protein YP_001135786.1 KEGG: mmc:Mmcs_0283 hypothetical protein YP_001135787.1 KEGG: mva:Mvan_2858 conserved hypothetical protein YP_001135788.1 KEGG: mmc:Mmcs_0281 hypothetical protein YP_001135789.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: msm:MSMEG_2860 virulence factor mce family protein YP_001135790.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0279 mammalian cell entry YP_001135791.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0278 mammalian cell entry YP_001135792.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0277 mammalian cell entry YP_001135793.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0276 mammalian cell entry YP_001135794.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_0275 mammalian cell entry YP_001135795.1 PFAM: protein of unknown function DUF140; KEGG: mmc:Mmcs_0274 protein of unknown function DUF140 YP_001135796.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0757 putative ABC transport system permease protein YP_001135797.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0292 short-chain dehydrogenase/reductase SDR YP_001135798.1 KEGG: mmc:Mmcs_0290 hypothetical protein YP_001135799.1 KEGG: mmc:Mmcs_0295 hypothetical protein YP_001135800.1 PFAM: luciferase family protein; KEGG: mva:Mvan_3368 luciferase family protein YP_001135801.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0294 short-chain dehydrogenase/reductase SDR YP_001135802.1 KEGG: mmc:Mmcs_0320 FAD dependent oxidoreductase YP_001135803.1 PFAM: ferredoxin; KEGG: rha:RHA1_ro05833 ketosteroid-9-alpha-hydroxylase, reductase YP_001135804.1 PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0318 acyl-CoA dehydrogenase, type 2-like protein YP_001135805.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_2891 glyoxalase/bleomycin resistance protein/dioxygenase YP_001135806.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_0316 fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_001135807.1 PFAM: regulatory proteins, IclR; KEGG: mmc:Mmcs_0315 transcriptional regulator, IclR family YP_001135808.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0314 alpha/beta hydrolase fold-3 YP_001135809.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_0289 NADH:flavin oxidoreductase/NADH oxidase YP_001135810.1 KEGG: mkm:Mkms_0323 conserved hypothetical protein YP_001135811.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mmc:Mmcs_0312 stress responsive alpha-beta barrel YP_001135812.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0311 short-chain dehydrogenase/reductase SDR YP_001135813.1 KEGG: mmc:Mmcs_0310 hypothetical protein YP_001135814.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa38250 putative acyl-CoA dehydrogenase YP_001135815.1 activates fatty acids by binding to coenzyme A YP_001135816.1 KEGG: mmc:Mmcs_0305 hypothetical protein YP_001135817.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0304 short-chain dehydrogenase/reductase SDR YP_001135818.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_0301 alpha/beta hydrolase fold-3 YP_001135819.1 KEGG: mmc:Mmcs_0300 hypothetical protein YP_001135820.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mkm:Mkms_0312 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001135821.1 KEGG: mmc:Mmcs_0297 hypothetical protein YP_001135822.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_0296 Rieske (2Fe-2S) region YP_001135823.2 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_001135824.1 PFAM: transcriptional regulator PadR family protein; KEGG: mmc:Mmcs_0288 transcriptional regulator, PadR-like family YP_001135825.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: rha:RHA1_ro02484 probable nitrilotriacetate monooxygenase component B YP_001135826.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_0286 thioesterase superfamily YP_001135827.1 PFAM: EAL domain protein; GAF domain protein; KEGG: art:Arth_1771 diguanylate phosphodiesterase YP_001135828.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4416 transcriptional regulator, TetR family YP_001135829.1 KEGG: mpa:MAP0771 hypothetical protein YP_001135830.1 KEGG: mva:Mvan_0818 conserved hypothetical protein YP_001135831.1 PFAM: cytochrome c oxidase, subunit III; KEGG: aeh:Mlg_2116 cytochrome c oxidase, subunit III YP_001135833.1 PFAM: Phosphoglycerate mutase; KEGG: mbo:Mb0776 PE-PGRS family protein YP_001135834.1 KEGG: bxe:Bxe_C1270 ABC sugar transporter, periplasmic ligand binding protein YP_001135835.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4837 transcriptional regulator, TetR family YP_001135836.1 PFAM: thioesterase superfamily protein; KEGG: mva:Mvan_0322 thioesterase superfamily protein YP_001135837.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4839 transcriptional regulator, TetR family YP_001135838.1 KEGG: mmc:Mmcs_4840 hypothetical protein YP_001135839.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein YP_001135840.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0318 transcriptional regulator, TetR family YP_001135841.1 PFAM: thioesterase superfamily protein; KEGG: nfa:pnf2350 hypothetical protein YP_001135842.1 KEGG: mmc:Mmcs_3187 hypothetical protein YP_001135843.1 KEGG: mmc:Mmcs_3184 hypothetical protein YP_001135844.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_3244 alcohol dehydrogenase GroES domain protein YP_001135845.1 activates fatty acids by binding to coenzyme A YP_001135846.1 KEGG: mmc:Mmcs_3183 hypothetical protein YP_001135847.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_3219 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001135848.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_3218 cytochrome P450 YP_001135849.1 PFAM: ferredoxin; KEGG: mmc:Mmcs_3217 ferredoxin YP_001135850.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_3216 transcriptional regulator, AraC family YP_001135851.1 PFAM: Carboxylesterase, type B; KEGG: mpa:MAP1780c carboxylesterase YP_001135852.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mkm:Mkms_3270 enoyl-CoA hydratase/isomerase YP_001135853.1 PFAM: Wyosine base formation; KEGG: mmc:Mmcs_3207 hypothetical protein YP_001135854.1 PFAM: protein of unknown function DUF1446; KEGG: mmc:Mmcs_3206 protein of unknown function DUF1446 YP_001135855.1 PFAM: regulatory protein, TetR; KEGG: art:Arth_1384 transcriptional regulator, TetR family YP_001135856.1 KEGG: mbo:Mb1295 adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase) YP_001135857.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa21770 putative acyl-CoA dehydrogenase YP_001135858.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa21780 putative transcriptional regulator YP_001135859.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nca:Noca_3816 short-chain dehydrogenase/reductase SDR YP_001135860.1 KEGG: mmc:Mmcs_3188 cytochrome P450 YP_001135861.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: nfa:nfa7130 putative monooxygenase YP_001135862.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mkm:Mkms_3255 alpha/beta hydrolase fold-3 domain protein YP_001135863.1 KEGG: mmc:Mmcs_3194 putative monooxygenase YP_001135864.1 PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3195 putative monooxygenase YP_001135865.1 KEGG: mmc:Mmcs_3196 hypothetical protein YP_001135866.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3197 short-chain dehydrogenase/reductase SDR YP_001135867.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3198 transcriptional regulator, TetR family YP_001135868.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3181 acyl-CoA dehydrogenase-like protein YP_001135869.1 PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3201 carboxyl transferase YP_001135870.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mkm:Mkms_3264 carbamoyl-phosphate synthase L chain, ATP-binding YP_001135871.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3203 acyl-CoA dehydrogenase-like protein YP_001135872.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_3204 O-succinylbenzoate-CoA ligase YP_001135873.1 KEGG: mmc:Mmcs_5428 TnpC protein YP_001135874.1 KEGG: mmc:Mmcs_5428 TnpC protein YP_001135875.1 PFAM: transposase IS3/IS911 family protein YP_001135876.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001135877.1 KEGG: rha:RHA1_ro03464 hypothetical protein YP_001135878.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3221 alpha/beta hydrolase fold YP_001135879.1 PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_3222 phenylacetic acid degradation-related protein YP_001135880.1 PFAM: regulatory protein, LacI; regulatory protein, TetR; KEGG: mkm:Mkms_3285 transcriptional regulator, TetR family YP_001135881.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001135882.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3225 alcohol dehydrogenase GroES-like protein YP_001135883.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3226 carboxymuconolactone decarboxylase YP_001135885.1 KEGG: mva:Mvan_0314 metal-dependent hydrolase YP_001135886.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3200 transcriptional regulator, TetR family YP_001135887.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3198 transcriptional regulator, TetR family YP_001135888.1 PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4841 MmpL YP_001135889.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001135890.1 PFAM: transposase IS3/IS911 family protein; KEGG: gvi:glr3858 putative transposase YP_001135891.1 PFAM: MMPL domain protein; KEGG: mmc:Mmcs_4841 MmpL YP_001135892.1 PFAM: transposase IS3/IS911 family protein; KEGG: cef:CE2618 putative transposase YP_001135893.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11094 possible transposase (mutator type) YP_001135895.1 KEGG: sth:STH2279 transposase YP_001135896.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11094 possible transposase (mutator type) YP_001135897.1 KEGG: mmc:Mmcs_5604 hypothetical protein YP_001135898.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001135899.1 PFAM: transposase IS3/IS911 family protein YP_001135900.1 PFAM: phage integrase family protein; KEGG: mva:Mvan_1114 phage integrase family protein YP_001135901.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase YP_001135902.1 KEGG: mmc:Mmcs_5602 putative transposase for insertion element IS6110 (second part) YP_001135903.1 KEGG: cef:CE2618 putative transposase YP_001135904.1 KEGG: mhu:Mhun_1552 hypothetical protein YP_001135906.1 molecular chaperone YP_001135907.1 PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_1816 FAD linked oxidase domain protein YP_001135908.1 KEGG: mbo:Mb2587 hypothetical protein YP_001135909.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: mmc:Mmcs_1416 transcriptional regulator, SARP family YP_001135910.1 PFAM: protein of unknown function UPF0182; KEGG: mmc:Mmcs_1415 protein of unknown function UPF0182 YP_001135911.1 KEGG: mmc:Mmcs_1414 PDZ/DHR/GLGF YP_001135912.1 KEGG: mmc:Mmcs_1413 hypothetical protein YP_001135913.1 KEGG: mpa:MAP3294 hypothetical protein YP_001135914.1 PFAM: ABC-1 domain protein; KEGG: mmc:Mmcs_1411 ABC-1 YP_001135915.1 PFAM: HMG-I and HMG-Y, DNA-binding domain protein; transcription factor WhiB; KEGG: mva:Mvan_1809 transcription factor WhiB YP_001135916.1 PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: mmc:Mmcs_1409 UvrD/REP helicase YP_001135917.1 TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: nfa:nfa45340 hypothetical protein YP_001135918.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates YP_001135919.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein,; KEGG: mmc:Mmcs_1406 TrkA-N YP_001135920.1 KEGG: mva:Mvan_1803 conserved hypothetical protein YP_001135921.1 PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_1404 UvrD/REP helicase YP_001135922.1 PFAM: UvrD/REP helicase; KEGG: mva:Mvan_1801 UvrD/REP helicase YP_001135923.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1402 alpha/beta hydrolase fold YP_001135924.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: mmc:Mmcs_1401 methylated-DNA-(protein)-cysteine S-methyltransferase YP_001135925.1 KEGG: mmc:Mmcs_1400 hypothetical protein YP_001135926.1 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation YP_001135927.1 KEGG: mmc:Mmcs_1398 hypothetical protein YP_001135928.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1397 transcriptional regulator, TetR family YP_001135929.1 KEGG: mtc:MT3304 hypothetical protein YP_001135930.1 KEGG: mmc:Mmcs_1395 hypothetical protein YP_001135931.1 KEGG: mmc:Mmcs_1394 hypothetical protein YP_001135932.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein YP_001135933.1 KEGG: mmc:Mmcs_1392 hypothetical protein YP_001135934.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mpa:MAP3314c chromosome partitioning protein YP_001135935.1 forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily YP_001135936.1 TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: mmc:Mmcs_1387 isochorismate synthases YP_001135937.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_1786 GCN5-related N-acetyltransferase YP_001135938.1 KEGG: mmc:Mmcs_1385 putative conserved integral membrane protein YP_001135939.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001135940.1 PFAM: diacylglycerol kinase, catalytic region; KEGG: mva:Mvan_1783 diacylglycerol kinase, catalytic region YP_001135941.1 PFAM: transcription factor WhiB; KEGG: rha:RHA1_ro06345 possible transcriptional regulator, WhiB family YP_001135942.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: mmc:Mmcs_1382 signal transduction histidine kinase YP_001135943.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mpa:MAP3322c hypothetical protein YP_001135944.1 KEGG: mmc:Mmcs_1380 hypothetical protein YP_001135945.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_1379 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001135946.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mmc:Mmcs_1378 hypothetical protein YP_001135947.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_1776 short-chain dehydrogenase/reductase SDR YP_001135948.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aba:Acid345_1190 UbiE/COQ5 methyltransferase YP_001135949.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: mmc:Mmcs_1364 methyltransferase small YP_001135950.1 PFAM: protein of unknown function DUF159; KEGG: mmc:Mmcs_1363 protein of unknown function DUF159 YP_001135951.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001135952.1 PFAM: GTPase EngC; KEGG: mpa:MAP3335 hypothetical protein YP_001135953.1 PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_1360 2,5-didehydrogluconate reductase YP_001135954.1 PFAM: fatty acid desaturase; KEGG: mva:Mvan_1768 fatty acid desaturase YP_001135955.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpa:MAP3344c hypothetical protein YP_001135956.1 KEGG: mbo:Mb3260c hypothetical protein YP_001135957.1 PFAM: protein of unknown function DUF344; KEGG: mbo:Mb3261c possible transcriptional regulatory protein PvdS (probable RNA polymerase sigma factor) YP_001135958.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mmc:Mmcs_1356 choline/carnitine/betaine transport YP_001135959.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_1355 protein of unknown function UPF0089 YP_001135960.1 KEGG: mmc:Mmcs_1354 conserved hypothetical alanine arginine proline rich protein YP_001135961.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_001135962.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mmc:Mmcs_1352 sigma 54 modulation protein/ribosomal protein S30EA YP_001135963.1 KEGG: mmc:Mmcs_1351 hypothetical protein YP_001135964.1 KEGG: mbo:Mb3546 hypothetical protein YP_001135965.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rha:RHA1_ro00654 plastoquinol--plastocyanin reductase YP_001135966.1 KEGG: mmc:Mmcs_1349 LpqB YP_001135967.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mmc:Mmcs_1348 periplasmic sensor signal transduction histidine kinase YP_001135968.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mmc:Mmcs_1347 two component transcriptional regulator, winged helix family YP_001135969.1 KEGG: gme:Gmet_1207 hypothetical protein YP_001135970.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_001135971.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mbo:Mb3124c PE-PGRS family protein, probably triacylglycerol lipase (esterase/lipase) (triglyceride lipase) (tributyrase) YP_001135973.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001135974.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1335 transcriptional regulator, TetR family YP_001135975.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mbo:Mb3278c probable rubredoxin RubB YP_001135976.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: nfa:nfa46170 putative rubredoxin YP_001135977.1 PFAM: fatty acid desaturase; KEGG: mva:Mvan_1742 alkane 1-monooxygenase YP_001135978.1 PFAM: amino acid permease-associated region; KEGG: mmc:Mmcs_1332 amino acid permease-associated region YP_001135979.1 KEGG: mmc:Mmcs_1331 hypothetical protein YP_001135980.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: mmc:Mmcs_1330 mannose-6-phosphate isomerase, class I YP_001135981.1 KEGG: mmc:Mmcs_1329 hypothetical protein YP_001135982.1 converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells YP_001135983.1 KEGG: mmc:Mmcs_1327 hypothetical protein YP_001135984.1 KEGG: mmc:Mmcs_1326 hypothetical protein YP_001135985.1 PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_1325 transcription factor WhiB YP_001135986.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO) YP_001135987.1 catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0) YP_001135988.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_1322 NUDIX hydrolase YP_001135989.1 KEGG: mmc:Mmcs_4275 hypothetical protein YP_001135990.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mmc:Mmcs_1321 nucleotidyl transferase YP_001135991.1 PFAM: glycosyl transferase, family 2; KEGG: mva:Mvan_1728 glycosyl transferase, family 2 YP_001135992.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mva:Mvan_1727 dTDP-4-dehydrorhamnose reductase YP_001135993.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mva:Mvan_1726 cell envelope-related transcriptional attenuator YP_001135994.1 KEGG: mmc:Mmcs_1317 hypothetical protein YP_001135995.1 KEGG: mmc:Mmcs_1316 hypothetical protein YP_001135996.1 KEGG: mmc:Mmcs_1316 hypothetical protein YP_001135997.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mmc:Mmcs_1304 biotin--acetyl-CoA-carboxylase ligase YP_001135998.1 KEGG: mtc:MT2625 hypothetical protein YP_001135999.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1300 acyl-CoA dehydrogenase-like protein YP_001136000.1 TIGRFAM: putative outer membrane adhesin like protein; PFAM: peptidase M23B; KEGG: sak:SAK_0064 zoocin A YP_001136001.1 PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein YP_001136002.1 KEGG: mmc:Mmcs_1299 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001136003.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_001136004.1 PFAM: GtrA family protein; KEGG: mmc:Mmcs_1297 GtrA-like protein YP_001136005.1 PFAM: membrane-flanked domain; KEGG: mmc:Mmcs_1296 membrane-flanked domain protein YP_001136006.1 KEGG: mmc:Mmcs_3582 amine oxidase YP_001136007.1 KEGG: mmc:Mmcs_3583 di-trans-poly-cis-decaprenylcistransferase YP_001136008.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region YP_001136009.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mkm:Mkms_0962 NAD-dependent epimerase/dehydratase YP_001136010.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mmc:Mmcs_0945 GDP-mannose 4,6-dehydratase YP_001136011.1 PFAM: sugar transferase; KEGG: mmc:Mmcs_1295 undecaprenyl-phosphate galactosephosphotransferase YP_001136013.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mmc:Mmcs_0932 protein tyrosine phosphatase YP_001136014.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rha:RHA1_ro05443 possible N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase YP_001136015.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ace:Acel_0604 SMP-30/gluconolaconase/LRE domain protein YP_001136018.1 TIGRFAM: methyltransferase FkbM family; KEGG: syn:slr2119 hypothetical protein YP_001136019.1 PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region YP_001136020.1 PFAM: polysaccharide biosynthesis protein; KEGG: bba:Bd1688 putative polysaccharide biosynthesis protein CpsL YP_001136021.1 PFAM: glycosyl transferase, family 2; KEGG: mtc:MT1564 glycosyl transferase YP_001136022.1 KEGG: gvi:glr3783 hypothetical protein YP_001136023.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: syn:slr2124 short-chain alcohol dehydrogenase family YP_001136024.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: syn:slr2123 D-isomer specific 2-hydroxyacid dehydrogenase family YP_001136025.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: syn:slr2122 hypothetical protein YP_001136026.1 PFAM: glycosyl transferase, family 2; KEGG: syn:slr2120 hypothetical protein YP_001136027.1 PFAM: lipopolysaccharide biosynthesis; KEGG: mmc:Mmcs_0946 protein-tyrosine kinase YP_001136028.1 KEGG: mmc:Mmcs_0947 hypothetical protein YP_001136030.1 PFAM: carboxyl transferase; KEGG: mva:Mvan_1677 carboxyl transferase YP_001136031.1 KEGG: mmc:Mmcs_1293 hypothetical protein YP_001136032.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_001136033.1 KEGG: mmc:Mmcs_0950 hypothetical protein YP_001136034.1 KEGG: mmc:Mmcs_1284 hypothetical protein YP_001136035.1 PFAM: acyltransferase 3; KEGG: mmc:Mmcs_0955 acyltransferase 3 YP_001136036.1 PFAM: Rhodanese domain protein; KEGG: mmc:Mmcs_1291 rhodanese-like protein YP_001136037.1 PFAM: Fe-S metabolism associated SufE; KEGG: mmc:Mmcs_1290 Fe-S metabolism associated SufE YP_001136039.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_0356 diguanylate cyclase YP_001136040.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mmc:Mmcs_1289 carbamoyl-phosphate synthase L chain, ATP-binding protein YP_001136041.1 KEGG: mva:Mvan_1663 conserved hypothetical protein YP_001136043.1 KEGG: mva:Mvan_1662 conserved hypothetical protein YP_001136044.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_1282 anti-sigma-factor antagonist YP_001136045.1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock YP_001136046.1 KEGG: mmc:Mmcs_1280 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001136047.1 KEGG: mmc:Mmcs_1276 CsbD-like protein YP_001136048.1 KEGG: mva:Mvan_1656 conserved hypothetical protein YP_001136049.1 KEGG: mmc:Mmcs_1275 putative protein UsfY YP_001136050.1 KEGG: mmc:Mmcs_1274 hypothetical protein YP_001136051.1 PFAM: restriction endonuclease; KEGG: mmc:Mmcs_1273 restriction endonuclease YP_001136052.1 catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate YP_001136053.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1271 transcriptional regulator, AsnC family YP_001136054.1 PFAM: protein of unknown function DUF1338; KEGG: mva:Mvan_1644 protein of unknown function DUF1338 YP_001136055.1 PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1270 aldehyde dehydrogenase YP_001136056.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1268 short-chain dehydrogenase/reductase SDR YP_001136057.1 PFAM: cytochrome P450; KEGG: rha:RHA1_ro04627 cytochrome P450 CYP102 YP_001136058.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3323 probable transcriptional regulatory protein (probably TetR-family) YP_001136059.1 KEGG: mmc:Mmcs_0164 hypothetical protein YP_001136060.1 KEGG: mmc:Mmcs_1195 hypothetical protein YP_001136061.1 KEGG: mva:Mvan_1637 conserved hypothetical protein YP_001136062.1 KEGG: mmc:Mmcs_0579 hypothetical protein YP_001136063.1 TIGRFAM: Dyp-type peroxidase family; KEGG: mmc:Mmcs_0577 Dyp-type peroxidase YP_001136064.1 KEGG: mmc:Mmcs_0576 hypothetical protein YP_001136065.1 PFAM: regulatory protein, LuxR; KEGG: reu:Reut_B4759 regulatory protein, LuxR YP_001136066.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1267 DEAD/H associated YP_001136067.1 PFAM: Formamidopyrimidine-DNA glycolase; zinc finger, Fpg domain protein; KEGG: mmc:Mmcs_1265 DNA-formamidopyrimidine glycosylase YP_001136068.1 KEGG: mbo:Mb3741c hypothetical protein YP_001136069.1 KEGG: nfa:nfa7600 hypothetical protein YP_001136070.1 PFAM: fatty acid desaturase; KEGG: mva:Mvan_1628 fatty acid desaturase YP_001136071.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_1258 oxidoreductase FAD-binding region YP_001136072.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1257 transcriptional regulator, TetR family YP_001136073.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1254 enoyl-CoA hydratase/isomerase YP_001136074.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1253 short-chain dehydrogenase/reductase SDR YP_001136076.1 PFAM: pseudouridine synthase; KEGG: mva:Mvan_1621 pseudouridine synthase YP_001136077.1 PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1250 FAD dependent oxidoreductase YP_001136078.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity YP_001136079.1 KEGG: mmc:Mmcs_1248 hypothetical protein YP_001136080.1 KEGG: mtc:MT2308 hypothetical protein YP_001136081.1 TIGRFAM: Transport protein; PFAM: MMPL domain protein; KEGG: mmc:Mmcs_5174 transport protein YP_001136082.1 KEGG: mva:Mvan_1612 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20 YP_001136083.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mmc:Mmcs_1245 peptidase M20D, amidohydrolase YP_001136084.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_001136085.1 PFAM: putative ammonia monooxygenase; KEGG: mmc:Mmcs_1243 putative ammonia monooxygenase YP_001136086.1 PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1242 transcriptional regulator, MarR family YP_001136087.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mmc:Mmcs_1241 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001136088.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_4190 L-2,4-diaminobutyric acid acetyltransferase YP_001136089.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_001136090.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid YP_001136091.1 TIGRFAM: ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; KEGG: mmc:Mmcs_4193 ectoine hydroxylase YP_001136092.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_001136094.1 PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1239 NLP/P60 YP_001136095.1 PFAM: luciferase family protein; KEGG: rha:RHA1_ro06550 possible hydride transferase YP_001136096.1 KEGG: mmc:Mmcs_1234 hypothetical protein YP_001136097.1 catalyzes the formation of inosine from adenosine YP_001136098.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_001136099.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_001136100.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mmc:Mmcs_1230 succinate dehydrogenase, cytochrome b subunit YP_001136101.1 KEGG: mmc:Mmcs_1229 putative succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) YP_001136102.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001136103.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001136104.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0873 alpha/beta hydrolase fold YP_001136105.1 PFAM: protein of unknown function DUF1470; KEGG: sco:SCO0460 hypothetical protein YP_001136106.1 PFAM: protein of unknown function UPF0118; KEGG: mmc:Mmcs_1226 protein of unknown function UPF0118 YP_001136107.1 KEGG: mpa:MAP3445 hypothetical protein YP_001136108.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001136109.1 PFAM: amino acid permease-associated region; KEGG: rha:RHA1_ro05388 amino acid transporter, APC family YP_001136110.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_1181 UspA YP_001136111.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: tcx:Tcr_0105 VCBS YP_001136112.1 PFAM: transposase IS3/IS911 family protein; KEGG: mmc:Mmcs_0845 transposase IS3/IS911 YP_001136113.1 KEGG: rha:RHA1_ro05595 hypothetical protein YP_001136114.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation YP_001136115.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1219 transcriptional regulator, AsnC family YP_001136116.1 PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_1218 aminotransferase class-III YP_001136117.1 PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_1217 strictosidine synthase YP_001136119.1 PFAM: regulatory protein, LuxR; KEGG: mva:Mvan_1565 response regulator receiver protein YP_001136120.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4438 AMP-dependent synthetase and ligase YP_001136121.1 activates fatty acids by binding to coenzyme A YP_001136122.1 PFAM: metallophosphoesterase; KEGG: mmc:Mmcs_4782 metallophosphoesterase YP_001136123.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mmc:Mmcs_1216 serine-type D-Ala-D-Ala carboxypeptidase YP_001136124.1 TIGRFAM: putative ribonuclease; PFAM: ribonuclease BN; KEGG: mva:Mvan_1561 putative ribonuclease YP_001136125.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001136126.1 KEGG: sma:SAV3461 lipase YP_001136127.1 KEGG: mmc:Mmcs_1211 exodeoxyribonuclease III (xth); TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_001136128.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP3454 hypothetical protein YP_001136129.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_001136130.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_001136131.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1206 methyltransferase type 11 YP_001136132.1 KEGG: mmc:Mmcs_1205 hypothetical protein YP_001136133.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001136134.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mmc:Mmcs_1203 NADH:flavin oxidoreductase/NADH oxidase YP_001136135.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa47790 putative transcriptional regulator YP_001136136.1 PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mmc:Mmcs_1201 FHA domain containing protein YP_001136137.1 KEGG: rha:RHA1_ro03383 transcriptional regulator, TetR family YP_001136138.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mva:Mvan_1541 6,7-dihydropteridine reductase YP_001136139.1 PFAM: pentapeptide repeat protein; KEGG: mmc:Mmcs_1193 pentapeptide repeat YP_001136140.1 PFAM: protein of unknown function, ATP binding; Miro domain protein; KEGG: mmc:Mmcs_1192 protein of unknown function, ATP binding protein YP_001136141.1 PFAM: protein of unknown function DUF742; KEGG: mmc:Mmcs_1191 protein of unknown function DUF742 YP_001136142.1 PFAM: Roadblock/LC7 family protein; KEGG: mmc:Mmcs_1190 roadblock/LC7 YP_001136143.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; KEGG: mmc:Mmcs_1189 periplasmic sensor signal transduction histidine kinase YP_001136144.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1188 methyltransferase type 11 YP_001136145.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mva:Mvan_1533 tRNA/rRNA methyltransferase (SpoU) YP_001136146.1 PFAM: nitroreductase; KEGG: mmc:Mmcs_1184 nitroreductase YP_001136147.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase. YP_001136148.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_1122 diguanylate cyclase YP_001136149.1 PFAM: MaoC domain protein dehydratase; KEGG: mva:Mvan_1528 MaoC domain protein dehydratase YP_001136150.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: mpa:MAP3482 short chain dehydrogenase YP_001136151.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: mmc:Mmcs_1178 inosine/uridine-preferring nucleoside hydrolase YP_001136152.1 KEGG: mmc:Mmcs_1175 hypothetical protein YP_001136153.1 KEGG: mmc:Mmcs_1174 hypothetical protein YP_001136154.1 KEGG: mpa:MAP2199 hypothetical protein YP_001136155.1 KEGG: mav:MAV_1795 flavin-binding monooxygenase YP_001136156.1 PFAM: regulatory protein, MerR; KEGG: mpa:MAP2201 hypothetical protein YP_001136157.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001136158.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_3350 two component transcriptional regulator, LuxR family YP_001136159.1 KEGG: nfa:nfa28750 putative two-component system sensor kinase YP_001136160.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: mva:Mvan_1514 FAD dependent oxidoreductase YP_001136161.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1788 hypothetical protein YP_001136162.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001136163.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001136164.1 KEGG: mmc:Mmcs_1166 hypothetical protein YP_001136165.1 KEGG: mmc:Mmcs_1165 hypothetical protein YP_001136166.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase YP_001136167.1 KEGG: mmc:Mmcs_1163 hypothetical protein YP_001136168.1 PFAM: transcription factor WhiB; KEGG: mmc:Mmcs_1162 transcription factor WhiB YP_001136169.1 KEGG: mva:Mvan_1505 conserved hypothetical protein YP_001136170.1 PFAM: Nitrile hydratase alpha chain; KEGG: mmc:Mmcs_5258 thiocyanate hydrolase YP_001136171.1 KEGG: mmc:Mmcs_5259 hypothetical protein YP_001136172.1 KEGG: rha:RHA1_ro06228 hypothetical protein YP_001136173.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001136175.1 KEGG: mva:Mvan_1499 conserved hypothetical protein YP_001136176.1 PFAM: Lipocalin family protein; KEGG: mmc:Mmcs_1158 lipocalin-like protein YP_001136177.1 KEGG: mmc:Mmcs_1157 hypothetical protein YP_001136178.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth YP_001136179.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001136181.1 PFAM: protein of unknown function DUF222; KEGG: mbo:Mb2126 hypothetical protein YP_001136182.1 KEGG: mmc:Mmcs_1152 hypothetical protein YP_001136183.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001136184.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_1150 ribosomal-protein-alanine acetyltransferase YP_001136185.1 PFAM: peptidase M22, glycoprotease; KEGG: mmc:Mmcs_1149 peptidase M22, glycoprotease YP_001136186.1 PFAM: protein of unknown function UPF0079; KEGG: mmc:Mmcs_1148 protein of unknown function UPF0079 YP_001136187.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_1147 alpha/beta hydrolase fold YP_001136188.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001136189.1 KEGG: mva:Mvan_1483 glutamate decarboxylase; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase YP_001136190.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: mpa:MAP4256 hypothetical protein YP_001136191.1 KEGG: nfa:nfa31690 hypothetical protein YP_001136192.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_2714 anti-sigma-factor antagonist YP_001136193.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_001136194.1 KEGG: mmc:Mmcs_1138 hypothetical protein YP_001136195.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_1137 luciferase-like protein YP_001136196.1 PFAM: regulatory protein, TetR; KEGG: rha:RHA1_ro03389 possible transcriptional regulator, TetR family YP_001136197.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_1476 acyl-CoA dehydrogenase domain protein YP_001136199.1 KEGG: mbo:Mb3469c conserved hypothetical alanine and proline rich protein YP_001136200.1 KEGG: mmc:Mmcs_1135 hypothetical protein YP_001136201.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001136202.1 KEGG: mmc:Mmcs_1132 hypothetical protein YP_001136203.1 forms a direct contact with the tRNA during translation YP_001136204.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001136205.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mul:MUL_0495 Zn-dependent alcohol dehydrogenase, AdhX YP_001136206.1 PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro06081 dehydrogenase YP_001136207.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5134 transcriptional regulator, TetR family YP_001136208.1 KEGG: mmc:Mmcs_5135 lysophospholipase-like protein YP_001136209.1 PFAM: transcriptional regulator domain protein; GAF domain protein; KEGG: rha:RHA1_ro06080 hypothetical protein YP_001136210.1 KEGG: mva:Mvan_1465 conserved hypothetical protein YP_001136211.1 KEGG: mmc:Mmcs_1128 hypothetical protein YP_001136212.1 KEGG: mmc:Mmcs_1127 conserved hypothetical alanine and valine rich protein YP_001136213.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mmc:Mmcs_1126 cell division FtsK/SpoIIIE YP_001136214.1 KEGG: mva:Mvan_1446 conserved hypothetical protein YP_001136215.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_1124 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001136216.1 PFAM: protein of unknown function DUF690; KEGG: mmc:Mmcs_1123 protein of unknown function DUF690 YP_001136217.1 PFAM: protein of unknown function DUF1470; KEGG: mmc:Mmcs_1119 protein of unknown function DUF1470 YP_001136218.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmc:Mmcs_1118 protein of unknown function DUF6, transmembrane YP_001136219.1 PFAM: cutinase; KEGG: mpa:MAP4236c serine esterase, cutinase family YP_001136220.1 PFAM: cutinase; KEGG: mmc:Mmcs_1117 cutinase YP_001136221.1 PFAM: cutinase; KEGG: mmc:Mmcs_1116 cutinase YP_001136222.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001136223.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001136224.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001136225.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001136226.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001136227.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001136228.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001136229.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mbo:Mb1768c probable sulphate-transport transmembrane protein ABC transporter YP_001136231.1 PFAM: protein of unknown function UPF0089; KEGG: mkm:Mkms_3472 protein of unknown function UPF0089 YP_001136232.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_1102 UspA YP_001136233.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mmc:Mmcs_1099 protein of unknown function DUF21 YP_001136234.1 PFAM: zinc/iron permease; KEGG: pat:Patl_1472 zinc/iron permease YP_001136235.1 KEGG: mmc:Mmcs_4257 hypothetical protein YP_001136236.1 KEGG: mmc:Mmcs_1098 hypothetical protein YP_001136237.1 KEGG: bte:BTH_II0927 acetyl-CoA synthetase YP_001136238.1 KEGG: mmc:Mmcs_1089 hypothetical protein YP_001136239.1 PFAM: UspA domain protein; KEGG: mva:Mvan_1402 UspA domain protein YP_001136240.1 KEGG: mmc:Mmcs_1086 hypothetical protein YP_001136241.1 PFAM: PfkB domain protein; KEGG: mbo:Mb2054c probable phosphofructokinase PfkB (phosphohexokinase) YP_001136242.1 PFAM: phosphoribosyltransferase; Erythromycin esterase; KEGG: mmc:Mmcs_1081 erythromycin esterase YP_001136243.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mmc:Mmcs_3407 HAD-superfamily hydrolase subfamily IIB YP_001136244.1 KEGG: mxa:MXAN_6800 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region YP_001136245.1 PFAM: UspA domain protein; KEGG: mva:Mvan_1387 UspA domain protein YP_001136246.1 PFAM: UspA domain protein; KEGG: mbo:Mb2051c hypothetical protein YP_001136247.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Hemerythrin HHE cation binding domain protein; KEGG: mmc:Mmcs_1079 heavy metal translocating P-type ATPase YP_001136248.1 KEGG: mbo:Mb2058 conserved hypothetical protein Acg YP_001136249.1 PFAM: UspA domain protein; KEGG: mbo:Mb3158c hypothetical protein YP_001136250.1 PFAM: UspA domain protein; KEGG: mva:Mvan_1381 UspA domain protein YP_001136251.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1073 alcohol dehydrogenase GroES-like protein YP_001136252.1 KEGG: mbo:Mb1762c probable conserved transmembrane protein YP_001136253.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_1104 UspA YP_001136254.1 KEGG: mmc:Mmcs_1095 hypothetical protein YP_001136255.1 KEGG: mva:Mvan_1376 conserved hypothetical protein YP_001136256.1 PFAM: UspA domain protein; KEGG: mmc:Mmcs_0990 UspA YP_001136257.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1070 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001136258.1 PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein; KEGG: mmc:Mmcs_1069 cyclic nucleotide-binding protein YP_001136259.1 KEGG: mva:Mvan_1368 conserved hypothetical protein YP_001136260.1 KEGG: mmc:Mmcs_1067 hypothetical protein YP_001136261.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_1066 dTDP-glucose 4,6-dehydratase YP_001136262.1 PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: fal:FRAAL5169 putative TetR-family transcriptional regulator YP_001136263.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mca:MCA0724 monooxygenase, FAD-binding YP_001136264.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1064 methylmalonate-semialdehyde dehydrogenase YP_001136265.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1063 acyl-CoA dehydrogenase-like protein YP_001136266.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1062 3-hydroxyisobutyrate dehydrogenase YP_001136267.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mva:Mvan_1359 haloacid dehalogenase domain protein hydrolase YP_001136268.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_1056 two component transcriptional regulator, LuxR family YP_001136269.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_1055 putative signal transduction histidine kinase YP_001136270.1 KEGG: rfr:Rfer_4141 cytochrome P450 YP_001136271.1 PFAM: regulatory protein, MarR; KEGG: mva:Mvan_1356 transcriptional regulator, MarR family YP_001136272.1 KEGG: mmc:Mmcs_1050 putative transmembrane anti-sigma factor YP_001136273.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins YP_001136274.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_001136275.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001136276.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001136277.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mmc:Mmcs_1045 protein of unknown function Mtu_121 YP_001136278.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP4190c hypothetical protein YP_001136279.1 TIGRFAM: putative methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: mpa:MAP4189c hypothetical protein YP_001136280.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mmc:Mmcs_1042 signal peptide peptidase SppA, 67K type YP_001136281.1 PFAM: protein of unknown function DUF732 YP_001136282.1 late assembly protein YP_001136283.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001136284.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001136285.1 binds 5S rRNA along with protein L5 and L25 YP_001136286.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001136287.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_001136288.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_001136289.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001136290.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001136291.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001136292.1 PFAM: protein of unknown function DUF323; KEGG: mmc:Mmcs_1024 protein of unknown function DUF323 YP_001136293.1 PFAM: sulfatase; KEGG: mmc:Mmcs_1023 sulfatase YP_001136294.1 PFAM: ribosomal protein S17; KEGG: mva:Mvan_1314 ribosomal protein S17 YP_001136295.1 one of the stabilizing components for the large ribosomal subunit YP_001136296.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001136297.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_001136298.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001136299.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001136300.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001136301.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001136302.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001136303.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001136304.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001136305.1 PFAM: Carboxylesterase, type B; KEGG: mmc:Mmcs_1011 carboxylesterase, type B YP_001136306.1 PFAM: cytochrome P450; KEGG: mmc:Mmcs_1010 cytochrome P450 YP_001136307.1 PFAM: cytochrome P450; KEGG: mva:Mvan_1301 cytochrome P450 YP_001136308.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1008 transcriptional regulator, TetR family YP_001136309.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1007 major facilitator superfamily MFS_1 YP_001136310.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: mmc:Mmcs_1005 glucose-methanol-choline oxidoreductase YP_001136311.1 PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_1004 glycosyl transferase, family 2 YP_001136312.1 PFAM: Creatininase; KEGG: mbo:Mb0714 hypothetical protein YP_001136313.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mva:Mvan_1297 (S)-2-hydroxy-acid oxidase YP_001136314.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmc:Mmcs_1001 radical SAM YP_001136315.1 KEGG: mmc:Mmcs_1000 hypothetical protein YP_001136316.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0998 transcriptional regulator, TetR family YP_001136317.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_0997 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001136318.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_0996 glyoxalase/bleomycin resistance protein/dioxygenase YP_001136319.1 PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mkm:Mkms_5006 protein of unknown function DUF222 YP_001136320.1 KEGG: pol:Bpro_3166 hypothetical protein YP_001136322.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0995 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001136323.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_0994 transcriptional regulator, AsnC family YP_001136324.1 PFAM: amidinotransferase; KEGG: mmc:Mmcs_0993 amidinotransferase YP_001136325.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_0992 ornithine aminotransferase YP_001136326.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001136327.1 KEGG: mmc:Mmcs_0989 hypothetical protein YP_001136328.1 PFAM: cutinase; KEGG: mva:Mvan_1283 cutinase YP_001136329.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001136330.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001136331.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001136332.2 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001136333.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_1278 transcriptional regulator, TetR family YP_001136334.1 KEGG: mmc:Mmcs_0982 hypothetical protein YP_001136335.1 KEGG: mmc:Mmcs_0981 hypothetical protein YP_001136336.1 KEGG: mmc:Mmcs_0980 putative conserved transmembrane protein YP_001136337.1 KEGG: mva:Mvan_1274 conserved hypothetical protein YP_001136338.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001136339.1 PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: mmc:Mmcs_0977 PaaX-like protein YP_001136340.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_1269 acyl-CoA dehydrogenase domain protein YP_001136341.1 KEGG: mmc:Mmcs_0341 putative alanine and proline rich membrane protein YP_001136342.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mbo:Mb2446 hypothetical protein YP_001136343.1 PFAM: glycosyl transferase, family 2; KEGG: pcu:pc0452 hypothetical protein YP_001136344.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001136345.1 PFAM: Collagen triple helix repeat YP_001136346.1 TIGRFAM: methyltransferase FkbM family; KEGG: jan:Jann_2363 methyltransferase FkbM YP_001136347.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_001136349.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rpb:RPB_2404 K+-dependent Na+/Ca+ exchanger related-protein YP_001136350.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001136351.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001136353.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_1254 ABC transporter-related protein YP_001136354.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001136355.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001136356.1 PFAM: ROK family protein; KEGG: mmc:Mmcs_0965 ROK domain containing protein YP_001136357.1 KEGG: mbo:Mb0668 putative malonyl CoA-acyl carrier protein transacylase FabD2 (MCT) YP_001136358.1 PFAM: glycoside hydrolase, family 38; glycosyl hydrolases 38 domain protein; KEGG: mva:Mvan_1249 glycoside hydrolase, family 38 YP_001136359.1 KEGG: mmc:Mmcs_4285 hypothetical protein YP_001136360.1 PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: mmc:Mmcs_0960 helix-turn-helix, type 11 YP_001136361.1 KEGG: mmc:Mmcs_0959 hypothetical protein YP_001136362.1 PFAM: protein of unknown function DUF664; KEGG: mva:Mvan_1245 protein of unknown function DUF664 YP_001136363.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0957 transcriptional regulator, TetR family YP_001136364.1 KEGG: mpa:MAP3157 hypothetical protein YP_001136365.1 PFAM: ABC-1 domain protein; KEGG: mva:Mvan_1241 ABC-1 domain protein YP_001136366.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0953 alpha/beta hydrolase fold YP_001136367.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0951 cyclopropane-fatty-acyl-phospholipid synthase YP_001136368.1 KEGG: mmc:Mmcs_0778 hypothetical protein YP_001136369.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001136370.1 binds directly to 23S ribosomal RNA YP_001136371.1 Modulates Rho-dependent transcription termination YP_001136372.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_001136373.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_001136374.1 functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_001136375.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_001136376.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_001136377.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_1228 beta-lactamase domain protein YP_001136378.1 KEGG: sma:SAV1072 hypothetical protein YP_001136379.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001136380.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: mmc:Mmcs_0906 Mg2+ transporter protein, CorA-like protein YP_001136381.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0905 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001136382.1 KEGG: mva:Mvan_1215 putative conserved membrane protein YP_001136383.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: mmc:Mmcs_0901 exodeoxyribonuclease V, gamma subunit YP_001136384.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: mmc:Mmcs_0900 exodeoxyribonuclease V, beta subunit YP_001136385.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: mmc:Mmcs_0897 exodeoxyribonuclease V, alpha subunit YP_001136386.1 PFAM: conserved hypothetical protein 374; KEGG: mpa:MAP4077c hypothetical protein YP_001136387.1 KEGG: nfa:nfa21060 hypothetical protein YP_001136388.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: mva:Mvan_1202 glycine cleavage T protein (aminomethyl transferase) YP_001136389.1 PFAM: flavin-containing monooxygenase FMO; KEGG: mlo:mlr7328 hypothetical protein YP_001136390.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_0890 alkanesulfonate monooxygenase YP_001136392.1 KEGG: mmc:Mmcs_2687 hypothetical protein YP_001136393.1 PFAM: MMPL domain protein; KEGG: mbo:Mb1177 probable conserved transmembrane transport protein MmpL13 YP_001136394.1 PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: mmc:Mmcs_1059 chalcone and stilbene synthases-like protein YP_001136395.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mmc:Mmcs_1060 isoprenylcysteine carboxyl methyltransferase YP_001136396.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1061 monooxygenase, FAD-binding protein YP_001136397.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: rpe:RPE_2032 diguanylate cyclase YP_001136398.1 KEGG: sfu:Sfum_1470 glycogen/starch/alpha-glucan phosphorylases; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35 YP_001136399.1 KEGG: mkm:Mkms_0869 conserved hypothetical protein YP_001136400.1 PFAM: putative esterase; KEGG: mmc:Mmcs_4182 putative esterase YP_001136401.1 PFAM: Acetamidase/Formamidase; KEGG: mva:Mvan_1186 acetamidase/formamidase YP_001136402.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2657 short-chain dehydrogenase/reductase SDR YP_001136403.1 SMART: AAA ATPase; KEGG: fal:FRAAL5509 hypothetical protein YP_001136404.1 KEGG: fal:FRAAL5508 hypothetical protein; putative ''winged helix'' DNA-binding domain YP_001136405.1 KEGG: mmc:Mmcs_5227 hypothetical protein YP_001136406.1 SMART: AAA ATPase; KEGG: mmc:Mmcs_0861 ATPas YP_001136407.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dde:Dde_1657 threonine aldolase YP_001136408.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_A0632 NADPH:quinone reductase or related Zn-dependent oxidoreductase YP_001136409.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_3728 alpha/beta hydrolase fold YP_001136410.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mpa:MAP2722c hypothetical protein YP_001136411.1 KEGG: mmc:Mmcs_0865 hypothetical protein YP_001136412.1 KEGG: mmc:Mmcs_0864 hypothetical protein YP_001136413.1 KEGG: mva:Mvan_1172 conserved hypothetical protein YP_001136414.1 KEGG: sco:SCO0324 secreted protein YP_001136415.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_3594 molybdopterin oxidoreductase YP_001136416.1 PFAM: luciferase family protein; KEGG: mmc:Mmcs_0862 hypothetical protein YP_001136417.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_0225 protein of unknown function DUF894, DitE YP_001136418.1 KEGG: mpa:MAP1612c hypothetical protein YP_001136419.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5193 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001136420.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro06683 probable acyl-CoA dehydrogenase YP_001136421.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro06682 possible acyl-CoA dehydrogenase YP_001136422.1 PFAM: Integral membrane protein TerC; KEGG: rha:RHA1_ro06751 membrane protein YP_001136423.1 KEGG: rha:RHA1_ro03383 transcriptional regulator, TetR family YP_001136424.1 SMART: helix-turn-helix domain protein; KEGG: nfa:nfa23790 putative DNA-binding protein YP_001136425.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001136426.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa1170 putative transcriptional regulator YP_001136427.1 PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family YP_001136428.1 KEGG: mva:Mvan_1152 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001136429.1 PFAM: OsmC family protein; KEGG: mmc:Mmcs_1177 OsmC-like protein YP_001136430.1 KEGG: mva:Mvan_1146 conserved hypothetical protein YP_001136431.1 PFAM: ribonuclease H; KEGG: nfa:nfa39810 hypothetical protein YP_001136433.1 PFAM: PE-PPE, C-terminal domain protein YP_001136434.1 PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_0832 NUDIX hydrolase YP_001136435.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: mmc:Mmcs_0831 ADP-ribosylation/crystallin J1 YP_001136436.1 PFAM: metallophosphoesterase; KEGG: hch:HCH_04712 diadenosine tetraphosphatase and related serine/threonine protein phosphatase YP_001136437.1 KEGG: mbo:Mb0638 possible membrane protein YP_001136438.1 KEGG: mbo:Mb0637 possible membrane protein YP_001136439.1 PFAM: protein of unknown function DUF732; KEGG: mva:Mvan_1127 protein of unknown function DUF732 YP_001136440.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4403 L-carnitine dehydratase/bile acid-inducible protein F YP_001136441.1 PFAM: VanW family protein; KEGG: mva:Mvan_1124 VanW family protein YP_001136442.1 KEGG: mmc:Mmcs_0830 hypothetical protein YP_001136443.1 PFAM: ERCC4 domain protein; KEGG: mbo:Mb2558 hypothetical protein YP_001136444.1 PFAM: PilT protein domain protein; KEGG: mbo:Mb0309 hypothetical protein YP_001136445.1 PFAM: protein of unknown function DUF1206; KEGG: mmc:Mmcs_0210 protein of unknown function DUF1206 YP_001136446.1 PFAM: peptidase S15; KEGG: nph:NP4164A hypothetical protein YP_001136447.1 KEGG: cjk:jk0402 hypothetical protein YP_001136448.1 PFAM: protein of unknown function DUF1445; KEGG: cjk:jk0403 hypothetical protein YP_001136449.1 PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro03346 fatty acid desaturase YP_001136450.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: fra:Francci3_2565 transcriptional regulator, AbrB family YP_001136451.1 KEGG: mmc:Mmcs_2659 hypothetical protein YP_001136452.1 KEGG: mbo:Mb0373c hypothetical protein YP_001136453.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: rha:RHA1_ro01704 hypothetical protein YP_001136454.1 PFAM: PilT protein domain protein; KEGG: fra:Francci3_1502 PilT protein-like YP_001136455.1 KEGG: azo:azo2309 conserved hypothetical protein YP_001136456.1 KEGG: cef:CE0410 hypothetical protein YP_001136457.1 KEGG: bam:Bamb_0005 hypothetical protein YP_001136458.1 KEGG: sth:STH1293 hypothetical protein YP_001136459.1 SMART: AAA ATPase; KEGG: bam:Bamb_0004 GTPase subunit of restriction endonuclease-like protein YP_001136460.1 KEGG: mbo:Mb3503c probable dicarboxylic acid transport integral membrane protein KgtP (dicarboxylate transporter) YP_001136462.1 PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; PASTA domain containing protein; KEGG: mmc:Mmcs_1483 glycosyl transferase, family 51 YP_001136463.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_3400 serine/threonine protein kinase YP_001136464.1 PFAM: Death-on-curing protein; KEGG: mkm:Mkms_0853 death-on-curing family protein YP_001136465.1 PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_0858 protein of unknown function UPF0089 YP_001136466.1 PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro03346 fatty acid desaturase YP_001136467.1 PFAM: glycosidase, PH1107-related; KEGG: fal:FRAAL1702 hypothetical protein YP_001136468.1 KEGG: mva:Mvan_1053 conserved hypothetical protein; putative glycosyltransferase YP_001136469.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0790 glycosyl transferase, group 1 YP_001136470.1 activates fatty acids by binding to coenzyme A YP_001136471.1 PFAM: GAF domain protein; ANTAR domain protein; KEGG: fal:FRAAL3312 hypothetical protein YP_001136472.1 PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_5240 response regulator receiver and ANTAR domain protein YP_001136473.1 PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_5241 ANTAR YP_001136474.1 KEGG: mmc:Mmcs_0791 hypothetical protein YP_001136475.1 PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro03346 fatty acid desaturase YP_001136476.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mva:Mvan_1044 alanine dehydrogenase/PNT domain protein YP_001136477.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0790 glycosyl transferase, group 1 YP_001136479.1 KEGG: mmc:Mmcs_0792 hypothetical protein YP_001136480.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mpa:MAP0669 cold shock protein YP_001136481.1 KEGG: mpa:MAP1936c hypothetical protein YP_001136482.1 PFAM: peptidase S15; KEGG: mva:Mvan_1041 peptidase S15 YP_001136483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mpa:MAP0669 cold shock protein YP_001136484.1 KEGG: sco:SCO3166 putative membrane transport protein YP_001136485.1 KEGG: mpa:MAP0130 hypothetical protein YP_001136486.1 KEGG: nfa:nfa48420 hypothetical protein YP_001136487.1 KEGG: mmc:Mmcs_3399 hypothetical protein YP_001136488.1 PFAM: CsbD family protein; KEGG: mmc:Mmcs_3398 CsbD-like protein YP_001136489.1 PFAM: protein kinase; extracellular solute-binding protein, family 3; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0782 serine/threonine protein kinase YP_001136490.1 PFAM: helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro05586 possible transcriptional regulator YP_001136491.1 KEGG: mmc:Mmcs_0797 hypothetical protein YP_001136492.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rha:RHA1_ro03927 probable D-3-phosphoglycerate dehydrogenase YP_001136493.1 KEGG: mmc:Mmcs_0413 hypothetical protein YP_001136494.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1039 transcriptional regulator, AraC family YP_001136495.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mva:Mvan_1012 short-chain dehydrogenase/reductase SDR YP_001136496.1 PFAM: PE-PPE, C-terminal domain protein; KEGG: mbo:Mb1465 PE family protein YP_001136497.1 KEGG: mmc:Mmcs_0779 PKD domain containing protein YP_001136498.1 PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_2268 fatty acid desaturase YP_001136499.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_2269 ferredoxin YP_001136500.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_001136501.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001136502.1 KEGG: mmc:Mmcs_0773 hypothetical protein YP_001136503.1 KEGG: mmc:Mmcs_0773 hypothetical protein YP_001136504.1 putative metalloprotease YP_001136505.1 PFAM: Polyprenyl synthetase; KEGG: mmc:Mmcs_0771 trans-hexaprenyltranstransferase YP_001136506.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_0770 geranylgeranyl reductase YP_001136507.1 KEGG: mva:Mvan_0990 conserved hypothetical protein YP_001136508.1 KEGG: tfu:Tfu_1264 hypothetical protein YP_001136509.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_2377 alpha/beta hydrolase fold-3 YP_001136510.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_001136511.1 PFAM: O-methyltransferase domain protein; KEGG: mva:Mvan_0979 O-methyltransferase domain protein YP_001136512.1 PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0761 glycosyl transferase, group 1 YP_001136513.1 KEGG: mmc:Mmcs_0755 hypothetical protein YP_001136514.1 KEGG: mmc:Mmcs_0752 putative conserved transmembrane protein YP_001136515.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis YP_001136516.1 PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0750 alpha/beta hydrolase fold YP_001136517.1 KEGG: mmc:Mmcs_5388 hypothetical protein YP_001136518.1 PFAM: ThiJ/PfpI domain protein; KEGG: mmc:Mmcs_0748 ThiJ/PfpI YP_001136519.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: mva:Mvan_0972 transcriptional regulator, AraC family YP_001136520.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate YP_001136521.1 PFAM: small multidrug resistance protein; KEGG: rha:RHA1_ro04738 quaternary ammonium compound-resistance protein SugE YP_001136522.1 PFAM: small multidrug resistance protein; KEGG: rha:RHA1_ro04738 quaternary ammonium compound-resistance protein SugE YP_001136523.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_0743 AMP-dependent synthetase and ligase YP_001136524.1 PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0969 transcriptional regulator, TetR family YP_001136525.1 KEGG: mmc:Mmcs_0745 hypothetical protein YP_001136526.1 KEGG: maq:Maqu_4217 hypothetical protein YP_001136528.1 KEGG: mkm:Mkms_5792 conserved hypothetical protein YP_001136529.1 KEGG: mkm:Mkms_6019 conserved hypothetical protein YP_001136530.1 KEGG: mkm:Mkms_5798 conserved hypothetical protein YP_001136531.1 KEGG: mkm:Mkms_5799 conserved hypothetical protein YP_001136532.1 PFAM: Methyltransferase type 11; SMART: DEAD-like helicases-like; KEGG: mkm:Mkms_5796 helicase domain protein YP_001136533.1 PFAM: ATP-binding region, ATPase domain protein; KEGG: mkm:Mkms_5727 histidine kinase YP_001136534.1 PFAM: transposase, IS4 family protein; KEGG: msm:MSMEG_6146 ISMsm3, transposase YP_001136535.1 KEGG: mkm:Mkms_5726 conserved hypothetical protein YP_001136536.1 KEGG: mkm:Mkms_5725 conserved hypothetical protein YP_001136537.1 KEGG: mkm:Mkms_5723 conserved hypothetical protein YP_001136538.1 KEGG: mkm:Mkms_5722 conserved hypothetical protein YP_001136539.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5721 ErfK/YbiS/YcfS/YnhG family protein YP_001136540.1 PFAM: NLP/P60 protein; KEGG: mva:Mvan_3652 NLP/P60 protein YP_001136541.1 PFAM: transcriptional regulator domain protein; KEGG: mva:Mvan_3653 response regulator receiver protein YP_001136542.1 KEGG: mkm:Mkms_5718 conserved hypothetical protein YP_001136543.1 PFAM: Penicillinase repressor; KEGG: mkm:Mkms_5717 transcriptional repressor, CopY family YP_001136544.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_5716 NLP/P60 protein YP_001136545.1 KEGG: mkm:Mkms_5715 response regulator receiver protein YP_001136547.1 KEGG: mkm:Mkms_5713 hypothetical protein YP_001136548.1 KEGG: mkm:Mkms_5712 conserved hypothetical protein YP_001136549.1 KEGG: mkm:Mkms_5711 conserved hypothetical protein YP_001136550.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mkm:Mkms_5710 ABC transporter related YP_001136551.1 KEGG: mkm:Mkms_5709 putative ABC transporter membrane protein YP_001136552.1 KEGG: mkm:Mkms_5708 conserved hypothetical protein YP_001136553.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mkm:Mkms_5707 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001136554.1 PFAM: protein of unknown function DUF156; KEGG: mkm:Mkms_5706 protein of unknown function DUF156 YP_001136555.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mkm:Mkms_5705 heavy metal transport/detoxification protein YP_001136556.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5704 heavy metal translocating P-type ATPase YP_001136557.1 KEGG: mkm:Mkms_5703 conserved hypothetical protein YP_001136558.1 PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: mkm:Mkms_5702 multicopper oxidase, type 2 YP_001136559.1 KEGG: mkm:Mkms_5701 hypothetical protein YP_001136560.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mkm:Mkms_5700 two component transcriptional regulator, winged helix family YP_001136561.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: mkm:Mkms_5699 integral membrane sensor signal transduction histidine kinase YP_001136562.1 PFAM: protein of unknown function DUF305; KEGG: mkm:Mkms_5698 protein of unknown function DUF305 YP_001136563.1 PFAM: protein of unknown function DUF302; KEGG: mkm:Mkms_5697 protein of unknown function DUF302 YP_001136564.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5696 copper-translocating P-type ATPase YP_001136565.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_5060 integrase, catalytic region YP_001136566.1 PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase YP_001136567.1 KEGG: mkm:Mkms_5695 conserved hypothetical protein YP_001136568.1 KEGG: mkm:Mkms_5694 conserved hypothetical protein YP_001136569.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5693 heavy metal translocating P-type ATPase YP_001136570.1 PFAM: regulatory protein, ArsR; KEGG: mkm:Mkms_5692 regulatory protein, ArsR YP_001136571.1 KEGG: mkm:Mkms_5691 conserved hypothetical protein YP_001136572.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mkm:Mkms_5690 helix-turn-helix-domain containing protein, AraC type YP_001136573.1 KEGG: mkm:Mkms_5689 conserved hypothetical protein YP_001136574.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mkm:Mkms_5688 putative adenylate/guanylate cyclase YP_001136575.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_5687 NLP/P60 protein YP_001136576.1 KEGG: mkm:Mkms_5685 conserved hypothetical protein YP_001136577.1 PFAM: DSBA oxidoreductase; KEGG: mva:Mvan_3690 DsbA oxidoreductase YP_001136578.1 PFAM: protein of unknown function DUF305; KEGG: mkm:Mkms_5683 protein of unknown function DUF305 YP_001136579.1 PFAM: copper resistance D domain protein; KEGG: mkm:Mkms_5682 copper resistance D domain protein YP_001136580.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mkm:Mkms_5681 cytochrome c biogenesis protein, transmembrane region YP_001136581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5680 ErfK/YbiS/YcfS/YnhG family protein YP_001136582.1 KEGG: mkm:Mkms_5679 putative transcriptional regulator YP_001136583.1 KEGG: mkm:Mkms_5678 conserved hypothetical protein YP_001136584.1 KEGG: mkm:Mkms_5677 conserved hypothetical protein YP_001136585.1 KEGG: mva:Mvan_3698 conserved hypothetical protein YP_001136586.1 KEGG: mkm:Mkms_5675 putative adenylate/guanylate cyclase YP_001136587.1 KEGG: mkm:Mkms_5675 putative adenylate/guanylate cyclase YP_001136588.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5674 heavy metal translocating P-type ATPase YP_001136589.1 PFAM: acyltransferase 3; KEGG: mkm:Mkms_5673 acyltransferase 3 YP_001136590.1 PFAM: cytochrome c assembly protein; KEGG: mva:Mvan_3702 cytochrome c assembly protein YP_001136591.1 KEGG: mkm:Mkms_5671 hypothetical protein YP_001136592.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mkm:Mkms_5670 cytochrome-c oxidase YP_001136593.1 PFAM: peptidase M23B; KEGG: mkm:Mkms_5669 peptidase M23B YP_001136594.1 PFAM: Penicillinase repressor; KEGG: mkm:Mkms_5668 transcriptional repressor, CopY family YP_001136595.1 PFAM: peptidase M48, Ste24p; KEGG: mkm:Mkms_5667 peptidase M48, Ste24p YP_001136596.1 KEGG: mkm:Mkms_5666 conserved hypothetical protein YP_001136597.1 KEGG: mkm:Mkms_5665 putative membrane protein YP_001136598.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mkm:Mkms_5664 redoxin domain protein YP_001136599.1 KEGG: mva:Mvan_3711 hypothetical protein YP_001136600.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mva:Mvan_3712 cytochrome c oxidase, subunit III YP_001136601.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_5661 NLP/P60 protein YP_001136602.1 PFAM: copper resistance protein CopC; KEGG: mva:Mvan_3714 copper resistance protein CopC YP_001136603.1 KEGG: mva:Mvan_3717 putative conserved lipoprotein LpqU YP_001136604.1 KEGG: mkm:Mkms_5656 conserved hypothetical protein YP_001136605.1 KEGG: mva:Mvan_3722 conserved hypothetical protein YP_001136606.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5604 ErfK/YbiS/YcfS/YnhG family protein YP_001136607.1 PFAM: transposase, mutator type; KEGG: rha:RHA1_ro11272 transposase YP_001136608.1 KEGG: mva:Mvan_3221 protein tyrosine phosphatase YP_001136609.1 PFAM: transposase, mutator type; KEGG: mkm:Mkms_5755 transposase, mutator type YP_001136611.1 PFAM: Integrase, catalytic region; KEGG: mkm:Mkms_5655 integrase, catalytic region YP_001136612.1 PFAM: transposase IS3/IS911 family protein; KEGG: mkm:Mkms_5607 transposase IS3/IS911 family protein YP_001136613.1 KEGG: nfa:pnf1430 hypothetical protein YP_001136614.1 KEGG: mva:Mvan_3689 conserved hypothetical protein YP_001136615.1 KEGG: mkm:Mkms_5695 conserved hypothetical protein YP_001136616.1 PFAM: copper resistance D domain protein; KEGG: mkm:Mkms_5682 copper resistance D domain protein YP_001136617.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mkm:Mkms_5681 cytochrome c biogenesis protein, transmembrane region YP_001136618.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5680 ErfK/YbiS/YcfS/YnhG family protein YP_001136619.1 PFAM: regulatory protein, ArsR; KEGG: mva:Mvan_3640 regulatory protein, ArsR YP_001136620.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5743 heavy metal translocating P-type ATPase YP_001136621.1 KEGG: mva:Mvan_3234 conserved hypothetical protein YP_001136622.1 KEGG: mva:Mvan_3232 conserved hypothetical protein YP_001136623.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mkm:Mkms_5675 putative adenylate/guanylate cyclase YP_001136624.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mkm:Mkms_5674 heavy metal translocating P-type ATPase YP_001136625.1 KEGG: mkm:Mkms_5671 hypothetical protein YP_001136626.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mva:Mvan_3704 cytochrome-c oxidase YP_001136627.1 PFAM: peptidase M23B; KEGG: mva:Mvan_3705 peptidase M23B YP_001136628.1 PFAM: Penicillinase repressor; KEGG: mva:Mvan_3706 transcriptional repressor, CopY family YP_001136629.1 PFAM: peptidase M48, Ste24p; KEGG: mva:Mvan_3707 peptidase M48, Ste24p YP_001136630.1 KEGG: mva:Mvan_3709 putative membrane protein YP_001136631.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mkm:Mkms_5664 redoxin domain protein YP_001136632.1 KEGG: mva:Mvan_3711 hypothetical protein YP_001136633.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mva:Mvan_3712 cytochrome c oxidase, subunit III YP_001136634.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_5661 NLP/P60 protein YP_001136635.1 PFAM: copper resistance protein CopC; KEGG: mkm:Mkms_5659 copper resistance protein CopC YP_001136636.1 PFAM: transposase, mutator type; KEGG: msm:MSMEG_4159 IS6120, transposase YP_001136637.1 KEGG: mva:Mvan_5408 hypothetical protein YP_001136638.1 KEGG: mva:Mvan_5409 hypothetical protein YP_001136639.1 PFAM: protein of unknown function DUF302; KEGG: mva:Mvan_5410 protein of unknown function DUF302 YP_001136640.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mva:Mvan_5411 heavy metal translocating P-type ATPase YP_001136641.1 PFAM: regulatory protein, ArsR; KEGG: mva:Mvan_5412 regulatory protein, ArsR YP_001136642.1 KEGG: mva:Mvan_5413 conserved hypothetical protein YP_001136643.1 KEGG: mva:Mvan_5414 hypothetical protein YP_001136644.1 KEGG: mva:Mvan_5415 hypothetical protein YP_001136645.1 KEGG: mva:Mvan_5416 hypothetical protein YP_001136646.1 PFAM: protein of unknown function DUF955; KEGG: mva:Mvan_5417 protein of unknown function DUF955 YP_001136647.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mva:Mvan_5418 phage integrase family protein YP_001136648.1 PFAM: phage integrase family protein; KEGG: mva:Mvan_5419 phage integrase family protein YP_001136649.1 KEGG: mva:Mvan_5420 Tn554 transposase C YP_001136650.1 PFAM: Abortive infection protein; KEGG: mkm:Mkms_5658 abortive infection protein YP_001136651.1 KEGG: mkm:Mkms_5657 putative conserved lipoprotein LpqU YP_001136652.1 KEGG: mkm:Mkms_5656 conserved hypothetical protein YP_001136653.1 PFAM: DSBA oxidoreductase; KEGG: mkm:Mkms_5606 DsbA oxidoreductase YP_001136654.1 KEGG: mkm:Mkms_5605 conserved hypothetical protein YP_001136655.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mkm:Mkms_5604 ErfK/YbiS/YcfS/YnhG family protein YP_001136656.1 KEGG: mkm:Mkms_5603 conserved hypothetical protein YP_001136657.1 KEGG: mkm:Mkms_5602 conserved hypothetical protein YP_001136658.1 KEGG: mkm:Mkms_5601 hypothetical protein YP_001136659.1 KEGG: mkm:Mkms_5600 conserved hypothetical protein YP_001136660.1 KEGG: mkm:Mkms_5599 putative transcriptional regulatory protein YP_001136661.1 KEGG: mkm:Mkms_5598 hypothetical protein YP_001136662.1 KEGG: mkm:Mkms_5595 hypothetical protein YP_001136663.1 PFAM: helix-turn-helix domain protein; KEGG: mkm:Mkms_5594 transcriptional regulator, XRE family YP_001136664.1 KEGG: mkm:Mkms_5593 hypothetical protein YP_001136665.1 SMART: AAA ATPase; KEGG: mkm:Mkms_5592 AAA ATPase YP_001136666.1 PFAM: Integrase, catalytic region; KEGG: mkm:Mkms_5591 integrase, catalytic region YP_001136667.1 KEGG: mkm:Mkms_5590 conserved hypothetical protein YP_001136668.1 KEGG: mkm:Mkms_5800 conserved hypothetical protein YP_001136669.1 KEGG: rha:RHA1_ro10087 hypothetical protein YP_001136670.1 KEGG: mkm:Mkms_5802 conserved hypothetical protein YP_001136671.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mkm:Mkms_5803 ATPase associated with various cellular activities, AAA_3 YP_001136672.1 KEGG: mkm:Mkms_5806 conserved hypothetical protein YP_001136673.1 KEGG: mkm:Mkms_5807 conserved hypothetical protein YP_001136675.1 KEGG: mkm:Mkms_5556 hypothetical protein YP_001136677.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mkm:Mkms_5808 phosphoadenosine phosphosulfate reductase YP_001136678.1 KEGG: mkm:Mkms_5809 conserved hypothetical protein YP_001136679.1 KEGG: mkm:Mkms_5810 conserved hypothetical protein YP_001136680.1 KEGG: mkm:Mkms_5811 conserved hypothetical protein YP_001136681.1 KEGG: mkm:Mkms_5812 conserved hypothetical protein YP_001136682.1 PFAM: protein of unknown function DUF324; KEGG: mkm:Mkms_5813 conserved hypothetical protein YP_001136683.1 KEGG: mmc:Mmcs_5614 hypothetical protein YP_001136684.1 KEGG: mkm:Mkms_5981 phage integrase family protein YP_001136685.1 PFAM: protein of unknown function DUF664; KEGG: fal:FRAAL3177 hypothetical protein YP_001136686.1 KEGG: bcl:ABC0477 hypothetical protein YP_001136687.1 PFAM: transposase IS3/IS911 family protein; KEGG: msm:MSMEG_1867 transposase YP_001136688.1 PFAM: Integrase, catalytic region; KEGG: msm:MSMEG_1866 transposase B YP_001136689.1 KEGG: cjk:jk0896 hypothetical protein YP_001136690.1 KEGG: sma:SAV875 putative aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_001136691.1 KEGG: msm:MSMEG_3958 glyoxalase/bleomycin resistance protein/dioxygenase YP_001136692.1 PFAM: transposase IS3/IS911 family protein; KEGG: msm:MSMEG_2676 IS1137, transposase orfA YP_001136693.1 PFAM: Integrase, catalytic region; KEGG: msm:MSMEG_1721 IS1137, transposase orfB YP_001136694.1 KEGG: mkm:Mkms_5573 conserved hypothetical protein YP_001136695.1 PFAM: Integrase, catalytic region; KEGG: mva:Mvan_2928 integrase, catalytic region YP_001136696.1 SMART: AAA ATPase; KEGG: mva:Mvan_2927 AAA ATPase YP_001136697.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mxa:MXAN_5479 putative acyltransferase YP_001136698.1 KEGG: mkm:Mkms_5901 hypothetical protein YP_001136699.1 KEGG: nfa:nfa7030 putative phage recombinase YP_001136700.1 PFAM: helix-turn-helix domain protein; KEGG: mkm:Mkms_5881 putative transcriptional regulator, XRE family YP_001136701.1 KEGG: mkm:Mkms_4843 Lsr2 YP_001136702.1 KEGG: nfa:nfa8240 hypothetical protein YP_001136703.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: msm:MSMEG_0083 membrane-anchored mycosin mycp1 YP_001136704.1 PFAM: protein of unknown function DUF571; KEGG: msm:MSMEG_0068 probable conserved transmembrane protein YP_001136705.1 KEGG: msm:MSMEG_0067 hypothetical protein YP_001136706.1 KEGG: mbo:Mb3905 6 kDa early secretory antigenic target EsaT6 (EsaT-6) YP_001136707.1 KEGG: msm:MSMEG_0065 hypothetical protein YP_001136708.1 PFAM: PPE protein; KEGG: mkm:Mkms_0078 PPE protein YP_001136709.1 PFAM: PE domain protein; KEGG: mul:MUL_1207 PE family protein YP_001136710.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: nfa:nfa8510 putative FtsK/SpoIIIE family protein YP_001136711.1 PFAM: protein of unknown function DUF690; KEGG: msm:MSMEG_0616 hypothetical protein YP_001136712.1 PFAM: AAA ATPase, central domain protein; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: mtc:MT3981 ATPase, AAA family YP_001136713.1 KEGG: mkm:Mkms_0072 conserved hypothetical protein YP_001136715.1 KEGG: mva:Mvan_0090 conserved hypothetical protein YP_001136717.1 PFAM: helix-turn-helix domain protein; KEGG: mkm:Mkms_5881 putative transcriptional regulator, XRE family YP_001136720.1 KEGG: rha:RHA1_ro08220 hypothetical protein YP_001136721.1 KEGG: rha:RHA1_ro08219 hypothetical protein YP_001136723.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: mkm:Mkms_3233 metal dependent phosphohydrolase YP_001136725.1 PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa44130 putative hydrolase YP_001136726.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: mva:Mvan_3319 putative transposase, IS891/IS1136/IS1341 family YP_001136727.1 PFAM: transposase IS200-family protein; KEGG: mva:Mvan_1583 transposase IS200-family protein YP_001136729.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS605 OrfB; KEGG: rha:RHA1_ro07260 probable transposase YP_001136730.1 PFAM: transposase IS200-family protein; KEGG: sma:SAV821 putative IS200-like transposase YP_001136732.1 KEGG: sma:SAV1057 hypothetical protein YP_001136733.1 KEGG: mkm:Mkms_5566 hypothetical protein YP_001136734.1 KEGG: mva:Mvan_5241 FHA domain containing protein YP_001136736.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: rha:RHA1_ro01646 possible transposase YP_001136737.1 KEGG: mkm:Mkms_5524 hypothetical protein YP_001136738.1 PFAM: helix-turn-helix domain protein; KEGG: mkm:Mkms_5523 helix-turn-helix domain protein YP_001136739.1 KEGG: mav:MAV_4810 hypothetical protein YP_001136740.1 KEGG: mav:MAV_4809 hypothetical protein YP_001136741.1 KEGG: rpe:RPE_4054 hypothetical protein YP_001136742.1 KEGG: pgi:PG0848 hypothetical protein YP_001136743.1 PFAM: sulfatase; KEGG: rha:RHA1_ro02004 arylsulfatase YP_001136744.1 KEGG: mbo:Mb3763 transcriptional regulatory protein (probably AraC/XylS-family) YP_001136745.1 PFAM: transposase IS3/IS911 family protein; KEGG: gvi:glr3858 putative transposase YP_001136746.1 PFAM: Integrase, catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001136747.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mkm:Mkms_0366 diguanylate cyclase YP_001136748.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pna:Pnap_0989 endonuclease/exonuclease/phosphatase YP_001136750.1 KEGG: mva:Mvan_3258 conserved hypothetical protein YP_001136751.1 KEGG: msm:MSMEG_4599 hypothetical protein YP_001136753.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rha:RHA1_ro00001 hypothetical protein YP_001136754.1 KEGG: mkm:Mkms_5894 conserved hypothetical protein YP_001136755.1 KEGG: mkm:Mkms_5894 conserved hypothetical protein YP_001136758.1 PFAM: transposase, IS4 family protein; KEGG: msm:MSMEG_6146 ISMsm3, transposase YP_001136759.1 KEGG: fra:Francci3_1102 putative DNA methyltransferase YP_001136760.1 KEGG: art:Arth_4228 hypothetical protein YP_001136761.1 KEGG: nfa:nfa13870 hypothetical protein YP_001136762.1 KEGG: cch:Cag_1309 methylase YP_001136764.1 PFAM: transposase, IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein YP_001136765.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: ppd:Ppro_3669 helicase domain protein YP_001136766.1 KEGG: mkm:Mkms_5576 conserved hypothetical protein YP_001136767.1 KEGG: mva:Mvan_3735 hypothetical protein YP_001136770.1 KEGG: hma:pNG6165 LtrC-like protein YP_001136773.1 SMART: helix-turn-helix domain protein; KEGG: nfa:nfa4160 putative DNA-binding protein YP_001136774.1 KEGG: mkm:Mkms_2904 conserved hypothetical protein YP_001136776.1 KEGG: mkm:Mkms_5971 ParB-like partition proteins YP_001136777.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mkm:Mkms_5972 cobyrinic acid a,c-diamide synthase YP_001136778.1 KEGG: mkm:Mkms_5973 conserved hypothetical protein YP_001136779.1 KEGG: mkm:Mkms_5583 conserved hypothetical protein YP_001136780.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mkm:Mkms_5582 cobyrinic acid a,c-diamide synthase YP_001136782.1 KEGG: rha:RHA1_ro11267 probable replication protein YP_001136783.1 PFAM: NLP/P60 protein; KEGG: rha:RHA1_ro10063 hypothetical protein YP_001136784.1 KEGG: fal:FRAAL1676 modular polyketide synthase YP_001136785.1 KEGG: mkm:Mkms_5764 hypothetical protein YP_001136786.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: rha:RHA1_ro10029 probable DNA translocase YP_001136788.1 KEGG: nfa:nfa8210 hypothetical protein YP_001136789.1 PFAM: NLP/P60 protein; KEGG: rha:RHA1_ro08686 possible peptidase/transglycosylase YP_001136790.1 KEGG: cgb:cg0697 hypothetical protein YP_001136791.1 KEGG: mkm:Mkms_5945 conserved hypothetical protein YP_001136792.1 KEGG: rha:RHA1_ro10026 hypothetical protein YP_001136794.1 KEGG: mkm:Mkms_5498 hypothetical protein YP_001136795.1 KEGG: mkm:Mkms_5931 conserved hypothetical protein YP_001136796.1 KEGG: mkm:Mkms_0068 conserved hypothetical protein YP_001136798.1 PFAM: helix-turn-helix domain protein YP_001136799.1 PFAM: transcription factor WhiB YP_001136801.1 KEGG: mkm:Mkms_5878 conserved hypothetical protein YP_001136802.1 PFAM: transcription factor WhiB; KEGG: mkm:Mkms_5877 transcription factor WhiB YP_001136803.1 KEGG: mkm:Mkms_5876 conserved hypothetical protein YP_001136804.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: pde:Pden_0261 D12 class N6 adenine-specific DNA methyltransferase YP_001136807.1 KEGG: mkm:Mkms_5868 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase YP_001136808.1 KEGG: mkm:Mkms_5884 conserved hypothetical protein YP_001136809.1 KEGG: rha:RHA1_ro10092 hypothetical protein YP_001136811.1 KEGG: bch:Bcen2424_0455 hypothetical protein YP_001136812.1 KEGG: nca:Noca_2233 hypothetical protein YP_001136814.1 KEGG: mkm:Mkms_5555 hypothetical protein YP_001136817.1 KEGG: mkm:Mkms_6021 conserved hypothetical protein YP_001136818.1 KEGG: dge:Dgeo_0293 metallophosphoesterase YP_001136820.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: fra:Francci3_4108 prevent-host-death protein YP_001136821.1 PFAM: PilT protein domain protein; KEGG: fra:Francci3_4109 PilT protein-like YP_001136823.1 PFAM: transposase IS3/IS911 family protein; KEGG: cdi:DIP2074 putative tranposase YP_001136825.1 KEGG: mkm:Mkms_5585 hypothetical protein YP_001136826.1 KEGG: mkm:Mkms_5511 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein YP_001136828.1 KEGG: mkm:Mkms_5770 putative methyl-accepting chemotaxis sensory transducer YP_001136829.1 KEGG: mkm:Mkms_5769 hypothetical protein YP_001136830.1 KEGG: mkm:Mkms_5560 conserved hypothetical protein YP_001136832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mva:Mvan_0796 diguanylate cyclase YP_001136834.1 PFAM: MMPL domain protein; KEGG: mkm:Mkms_5231 MmpL domain protein YP_001136835.1 PFAM: regulatory protein, TetR; KEGG: mkm:Mkms_5259 transcriptional regulator, TetR family YP_001136837.1 KEGG: mav:MAV_2727 hypothetical protein YP_001136838.1 KEGG: sco:SCO0107 aminoglycoside nucleotidyltransferase YP_001136839.1 PFAM: Clp N terminal domain protein; KEGG: rha:RHA1_ro00243 probable ATP-dependent Clp protease ATP-binding subunit YP_001136840.1 PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: mva:Mvan_3261 resolvase, N-terminal domain YP_001136842.1 PFAM: helix-turn-helix domain protein; KEGG: deh:cbdb_B6 hypothetical protein YP_001136843.1 KEGG: nha:Nham_4489 hypothetical protein YP_001136846.1 PFAM: protein of unknown function DUF1526; KEGG: cef:CE0419 hypothetical protein YP_001136847.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cjk:pKW4p15 type Ib partitioning protein YP_001136848.1 KEGG: ppr:PBPRC0042 hypothetical protein YP_001136850.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rxy:Rxyl_3210 cobyrinic acid a,c-diamide synthase YP_001136851.1 PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: mva:Mvan_3261 resolvase, N-terminal domain YP_001136852.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa870 putative transcriptional regulator YP_001136853.1 KEGG: bha:BH3953 hypothetical protein YP_001136854.1 PFAM: transcriptional regulator PadR family protein; KEGG: mul:MUL_2388 hypothetical protein YP_001136855.1 KEGG: mul:MUL_2387 hypothetical protein YP_001136856.1 KEGG: rha:RHA1_ro00752 hypothetical protein YP_001136857.1 KEGG: mkm:Mkms_5769 hypothetical protein YP_001136858.1 KEGG: mkm:Mkms_5770 putative methyl-accepting chemotaxis sensory transducer YP_001136860.1 KEGG: mkm:Mkms_5511 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein YP_001136861.1 KEGG: mkm:Mkms_5585 hypothetical protein