-- dump date 20140619_145412 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 582744000001 SEQ_END SEQ_END NC_012969.1 2995511 2995511 DR NC_012969.1; contig end 2995511..2995511 Methylovorus glucosetrophus SIP3-4 582744000002 SEQ_END SEQ_END NC_012970.1 76680 76680 DR NC_012970.1; contig end 76680..76680 Methylovorus glucosetrophus SIP3-4 582744000003 SEQ_END SEQ_END NC_012972.1 9816 9816 DR NC_012972.1; contig end 9816..9816 Methylovorus glucosetrophus SIP3-4 YP_003049777.1 CDS Msip34_0001 NC_012969.1 138 1547 D KEGG: mfa:Mfla_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 138..1547 Methylovorus glucosetrophus SIP3-4 8173684 YP_003049778.1 CDS Msip34_0002 NC_012969.1 1796 2899 D KEGG: mfa:Mfla_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 1796..2899 Methylovorus glucosetrophus SIP3-4 8173110 YP_003049779.1 CDS Msip34_0003 NC_012969.1 2975 5374 D KEGG: mfa:Mfla_0003 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 2975..5374 Methylovorus glucosetrophus SIP3-4 8173111 YP_003049780.1 CDS Msip34_0004 NC_012969.1 5448 6782 R TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: azo:azo1327 GTP-binding protein HflX; GTP-binding proten HflX complement(5448..6782) Methylovorus glucosetrophus SIP3-4 8173112 YP_003049781.1 CDS Msip34_0005 NC_012969.1 6851 7738 R PFAM: protein of unknown function RIO1; SMART: protein of unknown function RIO1; KEGG: tbd:Tbd_0611 hypothetical protein; hypothetical protein complement(6851..7738) Methylovorus glucosetrophus SIP3-4 8173113 YP_003049782.1 CDS Msip34_0006 NC_012969.1 7779 8090 R PFAM: protein of unknown function DUF190; KEGG: bpy:Bphyt_6221 protein of unknown function DUF190; hypothetical protein complement(7779..8090) Methylovorus glucosetrophus SIP3-4 8173114 YP_003049783.1 CDS Msip34_0007 NC_012969.1 8107 8490 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: tau:Tola_2564 CrcB protein; CrcB protein complement(8107..8490) Methylovorus glucosetrophus SIP3-4 8173115 YP_003049784.1 CDS Msip34_0008 NC_012969.1 8840 9265 D KEGG: mfa:Mfla_2597 hypothetical protein; hypothetical protein 8840..9265 Methylovorus glucosetrophus SIP3-4 8173116 YP_003049785.1 CDS Msip34_0009 NC_012969.1 9278 9790 D KEGG: mfa:Mfla_2596 proline-rich region; hypothetical protein 9278..9790 Methylovorus glucosetrophus SIP3-4 8173117 YP_003049786.1 CDS Msip34_0010 NC_012969.1 9924 11435 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 9924..11435 Methylovorus glucosetrophus SIP3-4 8173118 YP_003049787.1 CDS Msip34_0011 NC_012969.1 11452 13686 R PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: mfa:Mfla_0006 glycoside hydrolase family protein; glycoside hydrolase family 2 complement(11452..13686) Methylovorus glucosetrophus SIP3-4 8173119 YP_003049788.1 CDS Msip34_0012 NC_012969.1 13808 13903 R hypothetical protein complement(13808..13903) Methylovorus glucosetrophus SIP3-4 8173120 YP_003049789.1 CDS Msip34_0013 NC_012969.1 14082 15338 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_2906 major facilitator superfamily drug (bicyclomycin) resistance translocase; Bcr/CflA subfamily drug resistance transporter complement(14082..15338) Methylovorus glucosetrophus SIP3-4 8173121 YP_003049790.1 CDS Msip34_0014 NC_012969.1 15659 19372 D KEGG: mca:MCA0985 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 15659..19372 Methylovorus glucosetrophus SIP3-4 8173122 YP_003049791.1 CDS Msip34_0015 NC_012969.1 19456 19923 R PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I; class I cytochrome c complement(19456..19923) Methylovorus glucosetrophus SIP3-4 8173123 YP_003049792.1 CDS Msip34_0016 NC_012969.1 19981 21849 R KEGG: mfa:Mfla_0344 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase complement(19981..21849) Methylovorus glucosetrophus SIP3-4 8173124 YP_003049793.1 CDS Msip34_0017 NC_012969.1 22156 24072 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1043 sigma-54 dependent trancsriptional regulator; GAF modulated Fis family sigma-54 specific transcriptional regulator 22156..24072 Methylovorus glucosetrophus SIP3-4 8173125 YP_003049794.1 CDS Msip34_0018 NC_012969.1 24202 24714 D KEGG: mfa:Mfla_1290 hypothetical protein; hypothetical protein 24202..24714 Methylovorus glucosetrophus SIP3-4 8173126 YP_003049795.1 CDS Msip34_0019 NC_012969.1 24823 25731 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_0020 LysR family transcriptional regulator; LysR family transcriptional regulator 24823..25731 Methylovorus glucosetrophus SIP3-4 8173127 YP_003049796.1 CDS Msip34_0020 NC_012969.1 25801 25953 R TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A complement(25801..25953) Methylovorus glucosetrophus SIP3-4 8173128 YP_003049797.1 CDS Msip34_0021 NC_012969.1 25983 27080 R TIGRFAM: MJ0042 family finger-like protein; KEGG: mfa:Mfla_0022 zinc finger/thioredoxin putative; hypothetical protein complement(25983..27080) Methylovorus glucosetrophus SIP3-4 8173129 YP_003049798.1 CDS Msip34_0022 NC_012969.1 27077 27964 R TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: mfa:Mfla_0023 50S ribosomal protein L11P methyltransferase; 50S ribosomal protein L11 methyltransferase complement(27077..27964) Methylovorus glucosetrophus SIP3-4 8173130 YP_003049799.1 CDS Msip34_0023 NC_012969.1 27966 29315 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mfa:Mfla_0024 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, biotin carboxylase complement(27966..29315) Methylovorus glucosetrophus SIP3-4 8173131 YP_003049800.1 CDS Msip34_0024 NC_012969.1 29326 29778 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mfa:Mfla_0025 biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(29326..29778) Methylovorus glucosetrophus SIP3-4 8173132 YP_003049801.1 CDS Msip34_0025 NC_012969.1 29830 30285 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(29830..30285) Methylovorus glucosetrophus SIP3-4 8173133 YP_003049802.1 CDS Msip34_0026 NC_012969.1 30404 30958 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_0027 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(30404..30958) Methylovorus glucosetrophus SIP3-4 8173134 YP_003049803.1 CDS Msip34_0027 NC_012969.1 30960 32801 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mfa:Mfla_0028 protein-disulfide reductase; cytochrome c biogenesis protein transmembrane region complement(30960..32801) Methylovorus glucosetrophus SIP3-4 8173135 YP_003049804.1 CDS Msip34_0028 NC_012969.1 32806 33159 R PFAM: CutA1 divalent ion tolerance protein; KEGG: mfa:Mfla_0029 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(32806..33159) Methylovorus glucosetrophus SIP3-4 8173136 YP_003049805.1 CDS Msip34_0029 NC_012969.1 33271 33693 D PFAM: FxsA cytoplasmic membrane protein; KEGG: mfa:Mfla_0030 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 33271..33693 Methylovorus glucosetrophus SIP3-4 8173137 YP_003049806.1 CDS Msip34_0030 NC_012969.1 33882 34916 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 33882..34916 Methylovorus glucosetrophus SIP3-4 8173138 YP_003049807.1 CDS Msip34_0031 NC_012969.1 34969 36150 R PFAM: HemY domain protein; KEGG: mfa:Mfla_0032 HemY-like protein; HemY domain-containing protein complement(34969..36150) Methylovorus glucosetrophus SIP3-4 8173139 YP_003049808.1 CDS Msip34_0032 NC_012969.1 36150 37274 R PFAM: protein of unknown function DUF513 hemX; KEGG: mfa:Mfla_0033 protein of unknown function DUF513, HemX; hypothetical protein complement(36150..37274) Methylovorus glucosetrophus SIP3-4 8172222 YP_003049809.1 CDS Msip34_0033 NC_012969.1 37277 38080 R PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mfa:Mfla_0034 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 complement(37277..38080) Methylovorus glucosetrophus SIP3-4 8172223 YP_003049810.1 CDS hemC NC_012969.1 38073 39035 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(38073..39035) Methylovorus glucosetrophus SIP3-4 8172224 YP_003049811.1 CDS Msip34_0035 NC_012969.1 39119 39859 R PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: mfa:Mfla_0036 LytR/AlgR family transcriptional regulator; LytTR family two component transcriptional regulator complement(39119..39859) Methylovorus glucosetrophus SIP3-4 8172225 YP_003049812.1 CDS Msip34_0036 NC_012969.1 39932 40981 R PFAM: histidine kinase internal region; KEGG: mfa:Mfla_0037 histidine kinase internal region; histidine kinase complement(39932..40981) Methylovorus glucosetrophus SIP3-4 8172226 YP_003049813.1 CDS Msip34_0037 NC_012969.1 41011 42423 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 41011..42423 Methylovorus glucosetrophus SIP3-4 8172227 YP_003049814.1 CDS Msip34_0038 NC_012969.1 42442 43299 D KEGG: mfa:Mfla_0009 hypothetical protein; hypothetical protein 42442..43299 Methylovorus glucosetrophus SIP3-4 8172228 YP_003049815.1 CDS Msip34_0039 NC_012969.1 43627 45861 D TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: pnu:Pnuc_1171 cellulose synthase (UDP-forming); cellulose synthase catalytic subunit 43627..45861 Methylovorus glucosetrophus SIP3-4 8172229 YP_003049816.1 CDS Msip34_0040 NC_012969.1 45894 48032 D PFAM: cellulose synthase subunit B; KEGG: bgl:bglu_2g21300 cellulose synthase regulatory subunit, cyclic di-GMP binding; cellulose synthase subunit B 45894..48032 Methylovorus glucosetrophus SIP3-4 8172230 YP_003049817.1 CDS Msip34_0041 NC_012969.1 48040 48684 R hypothetical protein complement(48040..48684) Methylovorus glucosetrophus SIP3-4 8172231 YP_003049818.1 CDS Msip34_0042 NC_012969.1 48717 49745 D PFAM: glycoside hydrolase family 8; KEGG: pnu:Pnuc_1167 cellulase; cellulase 48717..49745 Methylovorus glucosetrophus SIP3-4 8172232 YP_003049819.1 CDS Msip34_0043 NC_012969.1 49742 52372 D KEGG: bps:BPSS1580 cellulose biosynthesis protein; hypothetical protein 49742..52372 Methylovorus glucosetrophus SIP3-4 8172233 YP_003049820.1 CDS Msip34_0044 NC_012969.1 52439 53656 R KEGG: mfa:Mfla_0040 coproporphyrinogen III oxidase, anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(52439..53656) Methylovorus glucosetrophus SIP3-4 8172234 YP_003049821.1 CDS Msip34_0045 NC_012969.1 53673 53891 R KEGG: mfa:Mfla_0041 hypothetical protein; hypothetical protein complement(53673..53891) Methylovorus glucosetrophus SIP3-4 8172235 YP_003049822.1 CDS Msip34_0046 NC_012969.1 53888 54493 R TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: mfa:Mfla_0042 Ham1-like protein; non-canonical purine NTP pyrophosphatase complement(53888..54493) Methylovorus glucosetrophus SIP3-4 8172236 YP_003049823.1 CDS Msip34_0047 NC_012969.1 54495 55211 R KEGG: mfa:Mfla_0043 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH complement(54495..55211) Methylovorus glucosetrophus SIP3-4 8172237 YP_003049824.1 CDS Msip34_0048 NC_012969.1 55307 56209 R KEGG: mfa:Mfla_0044 protein serine/threonine phosphatases; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase complement(55307..56209) Methylovorus glucosetrophus SIP3-4 8172238 YP_003049825.1 CDS Msip34_0049 NC_012969.1 56206 57147 R PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mfa:Mfla_0045 serine/threonine protein kinase; serine/threonine protein kinase complement(56206..57147) Methylovorus glucosetrophus SIP3-4 8172239 YP_003049826.1 CDS Msip34_0050 NC_012969.1 57317 58183 D PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: mfa:Mfla_0046 hypothetical protein; hypothetical protein 57317..58183 Methylovorus glucosetrophus SIP3-4 8172240 YP_003049827.1 CDS gmk NC_012969.1 58271 58879 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 58271..58879 Methylovorus glucosetrophus SIP3-4 8172241 YP_003049828.1 CDS Msip34_0052 NC_012969.1 58900 59112 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 58900..59112 Methylovorus glucosetrophus SIP3-4 8172242 YP_003049829.1 CDS Msip34_0053 NC_012969.1 59250 61472 D KEGG: mfa:Mfla_0050 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 59250..61472 Methylovorus glucosetrophus SIP3-4 8172243 YP_003049830.1 CDS Msip34_0054 NC_012969.1 61528 61908 D TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mfa:Mfla_0051 endoribonuclease L-PSP; endoribonuclease L-PSP 61528..61908 Methylovorus glucosetrophus SIP3-4 8172244 YP_003049831.1 CDS Msip34_0055 NC_012969.1 61941 63992 D KEGG: mfa:Mfla_0052 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase; helicase domain protein; ATP-dependent DNA helicase RecG 61941..63992 Methylovorus glucosetrophus SIP3-4 8172245 YP_003049832.1 CDS Msip34_0056 NC_012969.1 64015 64563 D PFAM: Chorismate lyase; KEGG: mfa:Mfla_0053 chorismate lyase; chorismate lyase 64015..64563 Methylovorus glucosetrophus SIP3-4 8172246 YP_003049833.1 CDS Msip34_0057 NC_012969.1 64560 65435 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mfa:Mfla_0054 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 64560..65435 Methylovorus glucosetrophus SIP3-4 8172247 YP_003049834.1 CDS rplM NC_012969.1 65529 65969 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 65529..65969 Methylovorus glucosetrophus SIP3-4 8172248 YP_003049835.1 CDS Msip34_0059 NC_012969.1 65979 66371 D PFAM: ribosomal protein S9; KEGG: mfa:Mfla_0056 SSU ribosomal protein S9P; 30S ribosomal protein S9 65979..66371 Methylovorus glucosetrophus SIP3-4 8172249 YP_003049836.1 CDS argC NC_012969.1 66522 67562 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 66522..67562 Methylovorus glucosetrophus SIP3-4 8172250 YP_003049837.1 CDS Msip34_0061 NC_012969.1 67565 68278 D KEGG: mfa:Mfla_0058 hypothetical protein; hypothetical protein 67565..68278 Methylovorus glucosetrophus SIP3-4 8172251 YP_003049838.1 CDS Msip34_0062 NC_012969.1 68306 68710 D PFAM: protein of unknown function DUF583; KEGG: dar:Daro_0652 hypothetical protein; hypothetical protein 68306..68710 Methylovorus glucosetrophus SIP3-4 8172252 YP_003049839.1 CDS Msip34_0063 NC_012969.1 68767 69117 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mfa:Mfla_0060 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 68767..69117 Methylovorus glucosetrophus SIP3-4 8172253 YP_003049840.1 CDS Msip34_0064 NC_012969.1 69213 70514 R KEGG: mfa:Mfla_0061 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(69213..70514) Methylovorus glucosetrophus SIP3-4 8172254 YP_003049841.1 CDS anmK NC_012969.1 70551 71645 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(70551..71645) Methylovorus glucosetrophus SIP3-4 8172255 YP_003049842.1 CDS Msip34_0066 NC_012969.1 71715 73061 R PFAM: Peptidase M23; KEGG: mfa:Mfla_0063 peptidase M23B; peptidase M23 complement(71715..73061) Methylovorus glucosetrophus SIP3-4 8172256 YP_003049843.1 CDS Msip34_0067 NC_012969.1 73159 74361 D KEGG: mfa:Mfla_0064 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 73159..74361 Methylovorus glucosetrophus SIP3-4 8172257 YP_003049844.1 CDS Msip34_0068 NC_012969.1 80352 80789 D PFAM: protein of unknown function DUF150; KEGG: mfa:Mfla_0065 hypothetical protein; hypothetical protein 80352..80789 Methylovorus glucosetrophus SIP3-4 8172263 YP_003049845.1 CDS nusA NC_012969.1 80833 82299 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 80833..82299 Methylovorus glucosetrophus SIP3-4 8172264 YP_003049846.1 CDS Msip34_0070 NC_012969.1 82390 85134 D TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein; elongation factor Tu domain 2 protein; GTP-binding protein HSR1-related; translation initiation factor IF-2 domain protein; Miro domain protein; KEGG: mfa:Mfla_0067 translation initiation factor 2; translation initiation factor IF-2 82390..85134 Methylovorus glucosetrophus SIP3-4 8172265 YP_003049847.1 CDS Msip34_0071 NC_012969.1 85150 85521 D TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: mfa:Mfla_0068 ribosome-binding factor A; ribosome-binding factor A 85150..85521 Methylovorus glucosetrophus SIP3-4 8172266 YP_003049848.1 CDS Msip34_0072 NC_012969.1 85549 86454 D TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: mfa:Mfla_0069 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 85549..86454 Methylovorus glucosetrophus SIP3-4 8172267 YP_003049849.1 CDS Msip34_0073 NC_012969.1 86654 86923 D TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: mfa:Mfla_0070 SSU ribosomal protein S15P; 30S ribosomal protein S15 86654..86923 Methylovorus glucosetrophus SIP3-4 8172268 YP_003049850.1 CDS Msip34_0074 NC_012969.1 87039 89162 D KEGG: mfa:Mfla_0071 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase 87039..89162 Methylovorus glucosetrophus SIP3-4 8172269 YP_003049851.1 CDS Msip34_0075 NC_012969.1 89269 89691 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mfa:Mfla_0072 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator complement(89269..89691) Methylovorus glucosetrophus SIP3-4 8172270 YP_003049852.1 CDS Msip34_0076 NC_012969.1 89867 90730 R PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mfa:Mfla_0073 methenyltetrahydrofolate cyclohydrolase; methylenetetrahydrofolate dehydrogenase complement(89867..90730) Methylovorus glucosetrophus SIP3-4 8172271 YP_003049853.1 CDS Msip34_0077 NC_012969.1 91725 93158 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0074 two component, sigma54 specific, fis family transcriptional regulator; Fis family two component sigma54 specific transcriptional regulator 91725..93158 Methylovorus glucosetrophus SIP3-4 8172275 YP_003049854.1 CDS Msip34_0078 NC_012969.1 93163 94563 D PFAM: Sporulation domain protein; KEGG: mfa:Mfla_0075 general secretion pathway protein, ATPase; sporulation domain-containing protein 93163..94563 Methylovorus glucosetrophus SIP3-4 8172276 YP_003049855.1 CDS Msip34_0079 NC_012969.1 94633 96447 D TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; KEGG: mfa:Mfla_0076 type II and III secretion system protein; pilus (MSHA type) biogenesis protein MshL 94633..96447 Methylovorus glucosetrophus SIP3-4 8172277 YP_003049856.1 CDS Msip34_0080 NC_012969.1 96431 97576 D PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0077 TPR repeat-containing protein; hypothetical protein 96431..97576 Methylovorus glucosetrophus SIP3-4 8172278 YP_003049857.1 CDS Msip34_0081 NC_012969.1 97614 99317 D PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_0078 type II secretion system protein E; type II secretion system protein E 97614..99317 Methylovorus glucosetrophus SIP3-4 8172279 YP_003049858.1 CDS Msip34_0082 NC_012969.1 99320 100525 D PFAM: type II secretion system protein; KEGG: mfa:Mfla_0079 type II secretion system protein; type II secretion system protein 99320..100525 Methylovorus glucosetrophus SIP3-4 8172280 YP_003049859.1 CDS Msip34_0083 NC_012969.1 100525 102120 D KEGG: mfa:Mfla_0080 hypothetical protein; hypothetical protein 100525..102120 Methylovorus glucosetrophus SIP3-4 8172281 YP_003049860.1 CDS Msip34_0084 NC_012969.1 102117 102731 D KEGG: mfa:Mfla_0081 hypothetical protein; hypothetical protein 102117..102731 Methylovorus glucosetrophus SIP3-4 8172282 YP_003049861.1 CDS Msip34_0085 NC_012969.1 102728 103201 D KEGG: mfa:Mfla_0082 hypothetical protein; hypothetical protein 102728..103201 Methylovorus glucosetrophus SIP3-4 8172283 YP_003049862.1 CDS Msip34_0086 NC_012969.1 103182 104333 D KEGG: mfa:Mfla_0083 hypothetical protein; hypothetical protein 103182..104333 Methylovorus glucosetrophus SIP3-4 8172284 YP_003049863.1 CDS Msip34_0087 NC_012969.1 104330 104983 D KEGG: dar:Daro_3413 general secretion pathway protein H; general secretion pathway protein H 104330..104983 Methylovorus glucosetrophus SIP3-4 8172285 YP_003049864.1 CDS Msip34_0088 NC_012969.1 104992 105741 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mfa:Mfla_0085 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD-binding protein 104992..105741 Methylovorus glucosetrophus SIP3-4 8172286 YP_003049865.1 CDS Msip34_0089 NC_012969.1 105738 106421 R KEGG: dat:HRM2_08410 multidrug resistance protein (efflux pump/antiporter); multidrug resistance protein (efflux pump/antiporter) complement(105738..106421) Methylovorus glucosetrophus SIP3-4 8172287 YP_003049866.1 CDS Msip34_0090 NC_012969.1 106547 107392 R PFAM: band 7 protein; SMART: band 7 protein; KEGG: mfa:Mfla_0086 SPFH domain-containing protein/band 7 family protein; hypothetical protein complement(106547..107392) Methylovorus glucosetrophus SIP3-4 8172288 YP_003049867.1 CDS Msip34_0091 NC_012969.1 107454 107906 R PFAM: protein of unknown function DUF107; KEGG: mfa:Mfla_0087 hypothetical protein; hypothetical protein complement(107454..107906) Methylovorus glucosetrophus SIP3-4 8172289 YP_003049868.1 CDS valS NC_012969.1 108053 110899 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 108053..110899 Methylovorus glucosetrophus SIP3-4 8172290 YP_003049869.1 CDS Msip34_0093 NC_012969.1 111194 112441 D KEGG: mms:mma_0639 hypothetical protein; hypothetical protein 111194..112441 Methylovorus glucosetrophus SIP3-4 8172291 YP_003049870.1 CDS Msip34_0094 NC_012969.1 112453 112701 R PFAM: SirA family protein; KEGG: mfa:Mfla_0093 SirA-like protein; SirA family protein complement(112453..112701) Methylovorus glucosetrophus SIP3-4 8172292 YP_003049871.1 CDS Msip34_0095 NC_012969.1 112721 113050 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_0094 rhodanese-like protein; rhodanese domain-containing protein complement(112721..113050) Methylovorus glucosetrophus SIP3-4 8172293 YP_003049872.1 CDS Msip34_0096 NC_012969.1 113234 113797 R PFAM: sugar transferase; KEGG: pna:Pnap_3481 sugar transferase; undecaprenyl-phosphate galactose phosphotransferase complement(113234..113797) Methylovorus glucosetrophus SIP3-4 8172294 YP_003049873.1 CDS Msip34_0097 NC_012969.1 113894 115042 R PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_1567 sigma-54 factor, interaction region; putative sigma-54 specific transcriptional regulator complement(113894..115042) Methylovorus glucosetrophus SIP3-4 8172295 YP_003049874.1 CDS Msip34_0098 NC_012969.1 115138 115308 R hypothetical protein complement(115138..115308) Methylovorus glucosetrophus SIP3-4 8172296 YP_003049875.1 CDS Msip34_0099 NC_012969.1 115399 116145 D PFAM: class II aldolase/adducin family protein; KEGG: mfa:Mfla_1566 class II aldolase/adducin-like protein; class II aldolase/adducin family protein 115399..116145 Methylovorus glucosetrophus SIP3-4 8172297 YP_003049876.1 CDS Msip34_0100 NC_012969.1 116108 117199 D KEGG: mfa:Mfla_1565 monooxygenase, putative; monooxygenase 116108..117199 Methylovorus glucosetrophus SIP3-4 8172298 YP_003049877.1 CDS Msip34_0101 NC_012969.1 117246 118349 D KEGG: mfa:Mfla_1564 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; sulfonate ABC transporter periplasmic sulfonate-binding protein SsuA 117246..118349 Methylovorus glucosetrophus SIP3-4 8172299 YP_003049878.1 CDS Msip34_0102 NC_012969.1 118628 119443 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1561 ABC transporter related; ABC transporter-like protein 118628..119443 Methylovorus glucosetrophus SIP3-4 8172300 YP_003049879.1 CDS Msip34_0103 NC_012969.1 119483 120334 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_1560 TonB-like protein; TonB family protein 119483..120334 Methylovorus glucosetrophus SIP3-4 8172301 YP_003049880.1 CDS Msip34_0104 NC_012969.1 120403 121113 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1559 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 120403..121113 Methylovorus glucosetrophus SIP3-4 8172302 YP_003049881.1 CDS Msip34_0105 NC_012969.1 121113 121520 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1558 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 121113..121520 Methylovorus glucosetrophus SIP3-4 8172383 YP_003049882.1 CDS Msip34_0106 NC_012969.1 121534 122340 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1557 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 121534..122340 Methylovorus glucosetrophus SIP3-4 8173925 YP_003049883.1 CDS Msip34_0107 NC_012969.1 122354 123148 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 122354..123148 Methylovorus glucosetrophus SIP3-4 8173926 YP_003049884.1 CDS Msip34_0108 NC_012969.1 123194 124225 D KEGG: cja:CJA_2334 putative dibenzothiophene desulfurization enzyme B; putative dibenzothiophene desulfurization enzyme B 123194..124225 Methylovorus glucosetrophus SIP3-4 8173927 YP_003049885.1 CDS Msip34_0109 NC_012969.1 124496 124930 D KEGG: pna:Pnap_4751 hypothetical protein; hypothetical protein 124496..124930 Methylovorus glucosetrophus SIP3-4 8173928 YP_003049886.1 CDS Msip34_0110 NC_012969.1 125105 127408 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0992 TonB-dependent receptor, putative; TonB-dependent receptor 125105..127408 Methylovorus glucosetrophus SIP3-4 8173929 YP_003049887.1 CDS Msip34_0111 NC_012969.1 127488 129083 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: met:M446_1311 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 127488..129083 Methylovorus glucosetrophus SIP3-4 8173930 YP_003049888.1 CDS Msip34_0112 NC_012969.1 129094 130503 D PFAM: Aldehyde Dehydrogenase; KEGG: pla:Plav_0092 aldehyde dehydrogenase; aldehyde dehydrogenase 129094..130503 Methylovorus glucosetrophus SIP3-4 8173931 YP_003049889.1 CDS Msip34_0113 NC_012969.1 130550 131743 D PFAM: major facilitator superfamily MFS_1; KEGG: pag:PLES_12641 putative major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 130550..131743 Methylovorus glucosetrophus SIP3-4 8173932 YP_003049890.1 CDS Msip34_0114 NC_012969.1 131810 132451 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1551 1-Cys peroxiredoxin; peroxidase complement(131810..132451) Methylovorus glucosetrophus SIP3-4 8173933 YP_003049891.1 CDS Msip34_0115 NC_012969.1 132567 133592 R KEGG: mfa:Mfla_1550 hypothetical protein; hypothetical protein complement(132567..133592) Methylovorus glucosetrophus SIP3-4 8173934 YP_003049892.1 CDS Msip34_0116 NC_012969.1 133791 135650 R PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mfa:Mfla_1549 ABC transporter related; ABC transporter-like protein complement(133791..135650) Methylovorus glucosetrophus SIP3-4 8173935 YP_003049893.1 CDS Msip34_0117 NC_012969.1 135643 137427 R PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mfa:Mfla_1548 ABC transporter related; ABC transporter-like protein complement(135643..137427) Methylovorus glucosetrophus SIP3-4 8173936 YP_003049894.1 CDS Msip34_0118 NC_012969.1 137497 139944 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1547 TonB-dependent receptor; TonB-dependent receptor complement(137497..139944) Methylovorus glucosetrophus SIP3-4 8173937 YP_003049895.1 CDS Msip34_0119 NC_012969.1 140448 141140 D KEGG: mfa:Mfla_1545 hypothetical protein; hypothetical protein 140448..141140 Methylovorus glucosetrophus SIP3-4 8173938 YP_003049896.1 CDS Msip34_0120 NC_012969.1 141203 141802 D PFAM: nitroreductase; KEGG: mfa:Mfla_1538 nitroreductase; nitroreductase 141203..141802 Methylovorus glucosetrophus SIP3-4 8173939 YP_003049897.1 CDS Msip34_0121 NC_012969.1 142024 143085 D KEGG: mfa:Mfla_1535 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 142024..143085 Methylovorus glucosetrophus SIP3-4 8173940 YP_003049898.1 CDS Msip34_0122 NC_012969.1 143096 144268 D PFAM: Luciferase-like monooxygenase; KEGG: mfa:Mfla_1534 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 143096..144268 Methylovorus glucosetrophus SIP3-4 8173941 YP_003049899.1 CDS Msip34_0123 NC_012969.1 144658 146010 D KEGG: mms:mma_1577 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC/GAF sensor-containing diguanylate cyclase 144658..146010 Methylovorus glucosetrophus SIP3-4 8173942 YP_003049900.1 CDS Msip34_0124 NC_012969.1 146031 147002 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mfa:Mfla_1276 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(146031..147002) Methylovorus glucosetrophus SIP3-4 8173943 YP_003049901.1 CDS Msip34_0125 NC_012969.1 147058 147825 R PFAM: glycosyl transferase family 2; KEGG: net:Neut_0179 glycosyl transferase family protein; family 2 glycosyl transferase complement(147058..147825) Methylovorus glucosetrophus SIP3-4 8173944 YP_003049902.1 CDS Msip34_0126 NC_012969.1 147849 148766 R PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13250 exopolysaccharide biosynthesis glycosyl transferase; family 2 glycosyl transferase complement(147849..148766) Methylovorus glucosetrophus SIP3-4 8173945 YP_003049903.1 CDS Msip34_0127 NC_012969.1 148882 149856 R PFAM: glycosyl transferase family 2; KEGG: gsu:GSU1509 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(148882..149856) Methylovorus glucosetrophus SIP3-4 8173946 YP_003049904.1 CDS Msip34_0128 NC_012969.1 149882 151063 R KEGG: pfl:PFL_2030 hypothetical protein; hypothetical protein complement(149882..151063) Methylovorus glucosetrophus SIP3-4 8173947 YP_003049905.1 CDS Msip34_0129 NC_012969.1 151071 152513 R KEGG: dal:Dalk_1659 hypothetical protein; hypothetical protein complement(151071..152513) Methylovorus glucosetrophus SIP3-4 8173948 YP_003049906.1 CDS Msip34_0130 NC_012969.1 152521 153396 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cju:C8J_1337 hypothetical protein; type 11 methyltransferase complement(152521..153396) Methylovorus glucosetrophus SIP3-4 8173949 YP_003049907.1 CDS Msip34_0131 NC_012969.1 153384 154598 R hypothetical protein complement(153384..154598) Methylovorus glucosetrophus SIP3-4 8173950 YP_003049908.1 CDS Msip34_0132 NC_012969.1 154604 155326 R PFAM: acylneuraminate cytidylyltransferase; KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(154604..155326) Methylovorus glucosetrophus SIP3-4 8173951 YP_003049909.1 CDS Msip34_0133 NC_012969.1 155329 157599 R PFAM: N-acetylneuraminic acid synthase domain; Xylose isomerase domain protein TIM barrel; SAF domain protein; CBS domain containing protein; KEGG: neu:NE1570 type III antifreeze protein; N-acylneuraminate-9-phosphate synthase complement(155329..157599) Methylovorus glucosetrophus SIP3-4 8173952 YP_003049910.1 CDS Msip34_0134 NC_012969.1 157589 159346 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet4835 lipopolysaccharide ABC exporter; ABC transporter-like protein complement(157589..159346) Methylovorus glucosetrophus SIP3-4 8173953 YP_003049911.1 CDS Msip34_0135 NC_012969.1 160026 161069 D KEGG: mfa:Mfla_0098 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 160026..161069 Methylovorus glucosetrophus SIP3-4 8173955 YP_003049912.1 CDS Msip34_0136 NC_012969.1 161076 161837 D TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mfa:Mfla_0099 cobalamin-5'-phosphate synthase; cobalamin 5'-phosphate synthase 161076..161837 Methylovorus glucosetrophus SIP3-4 8173956 YP_003049913.1 CDS Msip34_0137 NC_012969.1 161822 162418 D TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: mfa:Mfla_0100 phosphoglycerate mutase; alpha-ribazole phosphatase 161822..162418 Methylovorus glucosetrophus SIP3-4 8173957 YP_003049914.1 CDS Msip34_0138 NC_012969.1 162437 163939 D PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat-containing protein; hypothetical protein 162437..163939 Methylovorus glucosetrophus SIP3-4 8173958 YP_003049915.1 CDS Msip34_0139 NC_012969.1 164007 165929 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bra:BRADO7123 TPR domain-containing protein; hypothetical protein 164007..165929 Methylovorus glucosetrophus SIP3-4 8173959 YP_003049916.1 CDS Msip34_0140 NC_012969.1 166016 167020 R TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: har:HEAR0968 putative threonine-phosphate decarboxylase (L-threonine-O-3-phosphate decarboxylase); L-threonine-O-3-phosphate decarboxylase complement(166016..167020) Methylovorus glucosetrophus SIP3-4 8173960 YP_003049917.1 CDS cobD NC_012969.1 167013 167948 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(167013..167948) Methylovorus glucosetrophus SIP3-4 8173961 YP_003049918.1 CDS Msip34_0142 NC_012969.1 167963 169435 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 167963..169435 Methylovorus glucosetrophus SIP3-4 8173962 YP_003049919.1 CDS Msip34_0143 NC_012969.1 169468 169686 R KEGG: mfa:Mfla_0110 hypothetical protein; hypothetical protein complement(169468..169686) Methylovorus glucosetrophus SIP3-4 8173963 YP_003049920.1 CDS Msip34_0144 NC_012969.1 169689 170216 R PFAM: cobalbumin biosynthesis protein; KEGG: mfa:Mfla_0113 adenosylcobinamide kinase; adenosylcobinamide-phosphate guanylyltransferase complement(169689..170216) Methylovorus glucosetrophus SIP3-4 8173964 YP_003049921.1 CDS Msip34_0145 NC_012969.1 170219 171028 R PFAM: periplasmic binding protein; KEGG: mfa:Mfla_0114 periplasmic binding protein; periplasmic-binding protein complement(170219..171028) Methylovorus glucosetrophus SIP3-4 8173965 YP_003049922.1 CDS Msip34_0146 NC_012969.1 171228 171785 D hypothetical protein 171228..171785 Methylovorus glucosetrophus SIP3-4 8173966 YP_003049923.1 CDS Msip34_0147 NC_012969.1 171786 172457 R TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: mfa:Mfla_0115 Cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase complement(171786..172457) Methylovorus glucosetrophus SIP3-4 8173967 YP_003049924.1 CDS Msip34_0148 NC_012969.1 172454 172864 R KEGG: mfa:Mfla_0116 hypothetical protein; hypothetical protein complement(172454..172864) Methylovorus glucosetrophus SIP3-4 8173968 YP_003049925.1 CDS Msip34_0149 NC_012969.1 172874 173302 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_0117 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(172874..173302) Methylovorus glucosetrophus SIP3-4 8173969 YP_003049926.1 CDS Msip34_0150 NC_012969.1 173403 177743 R PFAM: CobN/magnesium chelatase; KEGG: mfa:Mfla_0118 hydrogenobyrinic acid a,c-diamide cobaltochelatase; magnesium chelatase complement(173403..177743) Methylovorus glucosetrophus SIP3-4 8173970 YP_003049927.1 CDS Msip34_0151 NC_012969.1 177740 179029 R TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_0119 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(177740..179029) Methylovorus glucosetrophus SIP3-4 8173971 YP_003049928.1 CDS Msip34_0152 NC_012969.1 179023 179634 R KEGG: mfa:Mfla_0120 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase complement(179023..179634) Methylovorus glucosetrophus SIP3-4 8173972 YP_003049929.1 CDS Msip34_0153 NC_012969.1 179631 180200 R KEGG: mfa:Mfla_0121 hypothetical protein; hypothetical protein complement(179631..180200) Methylovorus glucosetrophus SIP3-4 8173973 YP_003049930.1 CDS Msip34_0154 NC_012969.1 180321 182195 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0122 TonB-dependent receptor; TonB-dependent receptor complement(180321..182195) Methylovorus glucosetrophus SIP3-4 8173974 YP_003049931.1 CDS Msip34_0155 NC_012969.1 182682 183245 R KEGG: psa:PST_1290 hypothetical protein; hypothetical protein complement(182682..183245) Methylovorus glucosetrophus SIP3-4 8173975 YP_003049932.1 CDS Msip34_0156 NC_012969.1 183370 185286 R PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: azo:azo3556 putative TonB-dependent receptor; TonB-dependent receptor plug complement(183370..185286) Methylovorus glucosetrophus SIP3-4 8173976 YP_003049933.1 CDS Msip34_0157 NC_012969.1 185739 185969 D KEGG: mfa:Mfla_0123 hypothetical protein; hypothetical protein 185739..185969 Methylovorus glucosetrophus SIP3-4 8173977 YP_003049934.1 CDS Msip34_0158 NC_012969.1 185966 186271 D PFAM: protein of unknown function DUF710; KEGG: mfa:Mfla_0124 cell division protein ZapA; hypothetical protein 185966..186271 Methylovorus glucosetrophus SIP3-4 8173978 YP_003049935.1 CDS Msip34_0159 NC_012969.1 186564 186923 R KEGG: mfa:Mfla_0125 hypothetical protein; hypothetical protein complement(186564..186923) Methylovorus glucosetrophus SIP3-4 8173979 YP_003049936.1 CDS Msip34_0160 NC_012969.1 187063 187524 D PFAM: protein of unknown function DUF55; KEGG: mfa:Mfla_0126 hypothetical protein; hypothetical protein 187063..187524 Methylovorus glucosetrophus SIP3-4 8173980 YP_003049937.1 CDS Msip34_0161 NC_012969.1 187526 188089 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cvi:CV_2780 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 187526..188089 Methylovorus glucosetrophus SIP3-4 8173981 YP_003049938.1 CDS Msip34_0162 NC_012969.1 188182 189252 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; SMART: WD-40 repeat protein; KEGG: mpt:Mpe_A1302 hypothetical protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(188182..189252) Methylovorus glucosetrophus SIP3-4 8173982 YP_003049939.1 CDS Msip34_0163 NC_012969.1 189490 191001 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(189490..191001) Methylovorus glucosetrophus SIP3-4 8173983 YP_003049940.1 CDS Msip34_0164 NC_012969.1 191070 191726 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 191070..191726 Methylovorus glucosetrophus SIP3-4 8173984 YP_003049941.1 CDS Msip34_0165 NC_012969.1 191908 192615 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mfa:Mfla_0130 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 191908..192615 Methylovorus glucosetrophus SIP3-4 8173985 YP_003049942.1 CDS Msip34_0166 NC_012969.1 192748 194238 D PFAM: Ppx/GppA phosphatase; KEGG: mfa:Mfla_0131 Ppx/GppA phosphatase; Ppx/GppA phosphatase 192748..194238 Methylovorus glucosetrophus SIP3-4 8173986 YP_003049943.1 CDS Msip34_0167 NC_012969.1 194378 196462 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(194378..196462) Methylovorus glucosetrophus SIP3-4 8173987 YP_003049944.1 CDS Msip34_0168 NC_012969.1 196561 196833 R PFAM: Fe(II) trafficking protein YggX; KEGG: mfa:Mfla_0133 hypothetical protein; Fe(II) trafficking protein YggX complement(196561..196833) Methylovorus glucosetrophus SIP3-4 8173988 YP_003049945.1 CDS Msip34_0169 NC_012969.1 196973 199042 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0134 TonB-dependent receptor; TonB-dependent receptor complement(196973..199042) Methylovorus glucosetrophus SIP3-4 8173989 YP_003049946.1 CDS Msip34_0170 NC_012969.1 199107 199412 R KEGG: mfa:Mfla_0135 hypothetical protein; hypothetical protein complement(199107..199412) Methylovorus glucosetrophus SIP3-4 8173990 YP_003049947.1 CDS Msip34_0171 NC_012969.1 199532 200116 R PFAM: manganese and iron superoxide dismutase; KEGG: azo:azo1466 putative superoxide dismutase; Superoxide dismutase complement(199532..200116) Methylovorus glucosetrophus SIP3-4 8173991 YP_003049948.1 CDS Msip34_0172 NC_012969.1 200490 201368 R TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mfa:Mfla_0198 tyrosine recombinase XerC subunit; tyrosine recombinase XerC complement(200490..201368) Methylovorus glucosetrophus SIP3-4 8173992 YP_003049949.1 CDS Msip34_0173 NC_012969.1 201388 202065 R PFAM: protein of unknown function DUF484; KEGG: mfa:Mfla_0197 hypothetical protein; hypothetical protein complement(201388..202065) Methylovorus glucosetrophus SIP3-4 8173993 YP_003049950.1 CDS Msip34_0174 NC_012969.1 202115 202948 R KEGG: mfa:Mfla_0196 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; Phenazine biosynthesis PhzC/PhzF protein; diaminopimelate epimerase complement(202115..202948) Methylovorus glucosetrophus SIP3-4 8173994 YP_003049951.1 CDS Msip34_0175 NC_012969.1 203018 203881 R PFAM: lipid A biosynthesis acyltransferase; KEGG: mfa:Mfla_0195 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(203018..203881) Methylovorus glucosetrophus SIP3-4 8173995 YP_003049952.1 CDS Msip34_0176 NC_012969.1 203990 205147 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 203990..205147 Methylovorus glucosetrophus SIP3-4 8173996 YP_003049953.1 CDS Msip34_0177 NC_012969.1 205213 206460 D KEGG: tgr:Tgr7_1532 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 205213..206460 Methylovorus glucosetrophus SIP3-4 8173997 YP_003049954.1 CDS Msip34_0178 NC_012969.1 206669 208078 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 206669..208078 Methylovorus glucosetrophus SIP3-4 8173998 YP_003049955.1 CDS Msip34_0179 NC_012969.1 208126 208467 D PFAM: membrane protein of unknown function; KEGG: mfa:Mfla_0192 membrane protein of unknown function; hypothetical protein 208126..208467 Methylovorus glucosetrophus SIP3-4 8173999 YP_003049956.1 CDS Msip34_0180 NC_012969.1 208484 209329 D KEGG: mfa:Mfla_0191 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 208484..209329 Methylovorus glucosetrophus SIP3-4 8174000 YP_003049957.1 CDS Msip34_0181 NC_012969.1 209361 209819 R PFAM: protein of unknown function DUF494; KEGG: mfa:Mfla_0190 hypothetical protein; hypothetical protein complement(209361..209819) Methylovorus glucosetrophus SIP3-4 8174001 YP_003049958.1 CDS Msip34_0182 NC_012969.1 209931 211046 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mfa:Mfla_0189 DNA processing protein DprA, putative; DNA protecting protein DprA complement(209931..211046) Methylovorus glucosetrophus SIP3-4 8174002 YP_003049959.1 CDS Msip34_0183 NC_012969.1 211053 212204 R PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_0188 peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(211053..212204) Methylovorus glucosetrophus SIP3-4 8174003 YP_003049960.1 CDS Msip34_0184 NC_012969.1 212291 212791 D KEGG: mfa:Mfla_0187 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 212291..212791 Methylovorus glucosetrophus SIP3-4 8174004 YP_003049961.1 CDS Msip34_0185 NC_012969.1 212793 213743 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mfa:Mfla_0186 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 212793..213743 Methylovorus glucosetrophus SIP3-4 8173463 YP_003049962.1 CDS Msip34_0186 NC_012969.1 213811 214653 D PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_0185 M48 family peptidase; M48 family peptidase 213811..214653 Methylovorus glucosetrophus SIP3-4 8173464 YP_003049963.1 CDS Msip34_0187 NC_012969.1 214725 216008 D TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: mfa:Mfla_0184 sun protein; sun protein 214725..216008 Methylovorus glucosetrophus SIP3-4 8173465 YP_003049964.1 CDS Msip34_0188 NC_012969.1 215986 216576 D KEGG: mfa:Mfla_0183 putative proline rich signal peptide protein; hypothetical protein 215986..216576 Methylovorus glucosetrophus SIP3-4 8173466 YP_003049965.1 CDS Msip34_0189 NC_012969.1 216592 218718 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_0182 multi-sensor signal transduction histidine kinase; histidine kinase 216592..218718 Methylovorus glucosetrophus SIP3-4 8173467 YP_003049966.1 CDS Msip34_0190 NC_012969.1 218724 220007 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: mfa:Mfla_0181 two component, sigma54 specific, fis family transcriptional regulator; Fis family two component sigma54 specific transcriptional regulator 218724..220007 Methylovorus glucosetrophus SIP3-4 8173468 YP_003049967.1 CDS Msip34_0191 NC_012969.1 220049 220420 R PFAM: TfoX domain protein; KEGG: azo:azo2291 DNA transformation protein (competence activator); TfoX domain-containing protein complement(220049..220420) Methylovorus glucosetrophus SIP3-4 8173469 YP_003049968.1 CDS Msip34_0192 NC_012969.1 220486 221253 R TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_0172 exodeoxyribonuclease III; exodeoxyribonuclease III Xth complement(220486..221253) Methylovorus glucosetrophus SIP3-4 8173470 YP_003049969.1 CDS Msip34_0193 NC_012969.1 221325 221855 R PFAM: glutaredoxin; KEGG: mms:mma_0670 hypothetical protein; glutaredoxin complement(221325..221855) Methylovorus glucosetrophus SIP3-4 8173471 YP_003049970.1 CDS Msip34_0194 NC_012969.1 221869 223917 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mfa:Mfla_0150 oligopeptidase A; oligopeptidase A complement(221869..223917) Methylovorus glucosetrophus SIP3-4 8173472 YP_003049971.1 CDS Msip34_0195 NC_012969.1 223991 224347 R KEGG: mfa:Mfla_0149 hypothetical protein; hypothetical protein complement(223991..224347) Methylovorus glucosetrophus SIP3-4 8173473 YP_003049972.1 CDS Msip34_0196 NC_012969.1 224361 226139 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: mfa:Mfla_0148 phosphoenolpyruvate--protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(224361..226139) Methylovorus glucosetrophus SIP3-4 8173474 YP_003049973.1 CDS Msip34_0197 NC_012969.1 226123 226392 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mfa:Mfla_0147 HPrNtr; phosphotransferase system, phosphocarrier protein HPr complement(226123..226392) Methylovorus glucosetrophus SIP3-4 8173475 YP_003049974.1 CDS Msip34_0198 NC_012969.1 226385 226792 R PFAM: PTS system fructose subfamily IIA component; KEGG: mfa:Mfla_0146 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(226385..226792) Methylovorus glucosetrophus SIP3-4 8173476 YP_003049975.1 CDS Msip34_0199 NC_012969.1 226843 227694 R PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0145 hypothetical protein; hypothetical protein complement(226843..227694) Methylovorus glucosetrophus SIP3-4 8173477 YP_003049976.1 CDS Msip34_0200 NC_012969.1 227697 228662 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(227697..228662) Methylovorus glucosetrophus SIP3-4 8173478 YP_003049977.1 CDS Msip34_0201 NC_012969.1 228745 229074 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mfa:Mfla_0143 SSU ribosomal protein S30P / sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(228745..229074) Methylovorus glucosetrophus SIP3-4 8173479 YP_003049978.1 CDS Msip34_0202 NC_012969.1 229102 230556 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: mfa:Mfla_0142 sigma-54 (RpoN); RNA polymerase sigma-54 subunit RpoN complement(229102..230556) Methylovorus glucosetrophus SIP3-4 8173480 YP_003049979.1 CDS Msip34_0203 NC_012969.1 230581 231303 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0141 ABC transporter related; ABC transporter-like protein complement(230581..231303) Methylovorus glucosetrophus SIP3-4 8173481 YP_003049980.1 CDS Msip34_0204 NC_012969.1 231360 231917 R TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: mfa:Mfla_0140 OstA-like protein; lipopolysaccharide transport periplasmic protein LptA complement(231360..231917) Methylovorus glucosetrophus SIP3-4 8173482 YP_003049981.1 CDS Msip34_0205 NC_012969.1 231898 232653 R PFAM: protein of unknown function DUF1239; KEGG: mfa:Mfla_0139 hypothetical protein; hypothetical protein complement(231898..232653) Methylovorus glucosetrophus SIP3-4 8173483 YP_003049982.1 CDS Msip34_0206 NC_012969.1 232663 233187 R TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: mfa:Mfla_0138 phosphatase KdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(232663..233187) Methylovorus glucosetrophus SIP3-4 8173484 YP_003049983.1 CDS Msip34_0207 NC_012969.1 233189 234187 R KEGG: mfa:Mfla_0137 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein complement(233189..234187) Methylovorus glucosetrophus SIP3-4 8173485 YP_003049984.1 CDS Msip34_0208 NC_012969.1 234425 236419 D PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: cti:RALTA_A0336 glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein; sodium/hydrogen exchanger 234425..236419 Methylovorus glucosetrophus SIP3-4 8173486 YP_003049985.1 CDS Msip34_0209 NC_012969.1 236459 237553 D PFAM: FAD dependent oxidoreductase; KEGG: mfa:Mfla_0136 FAD dependent oxidoreductase; FAD dependent oxidoreductase 236459..237553 Methylovorus glucosetrophus SIP3-4 8173487 YP_003049986.1 CDS Msip34_0210 NC_012969.1 237584 238075 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: mfa:Mfla_1521 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(237584..238075) Methylovorus glucosetrophus SIP3-4 8173488 YP_003049987.1 CDS Msip34_0211 NC_012969.1 238165 238650 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mfa:Mfla_0199 GTP cyclohydrolase subunit MoaC; molybdenum cofactor biosynthesis protein C complement(238165..238650) Methylovorus glucosetrophus SIP3-4 8173489 YP_003049988.1 CDS Msip34_0212 NC_012969.1 238708 240144 D PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_0200 peptidase M48, Ste24p; peptidase M48 Ste24p 238708..240144 Methylovorus glucosetrophus SIP3-4 8173490 YP_003049989.1 CDS Msip34_0213 NC_012969.1 240161 240604 D KEGG: tbd:Tbd_0566 transmembrane proetin, twin-arginine translocation pathway signal; twin-arginine translocation pathway signal transmembrane protein 240161..240604 Methylovorus glucosetrophus SIP3-4 8173491 YP_003049990.1 CDS Msip34_0214 NC_012969.1 240613 240930 D PFAM: Sulphur oxidation protein SoxZ; KEGG: ank:AnaeK_1592 sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ 240613..240930 Methylovorus glucosetrophus SIP3-4 8173492 YP_003049991.1 CDS Msip34_0215 NC_012969.1 240958 241707 R KEGG: mfa:Mfla_0991 hypothetical protein; hypothetical protein complement(240958..241707) Methylovorus glucosetrophus SIP3-4 8173493 YP_003049992.1 CDS Msip34_0216 NC_012969.1 242094 242660 D KEGG: rso:RSp0245 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; peroxiredoxin 242094..242660 Methylovorus glucosetrophus SIP3-4 8173494 YP_003049993.1 CDS Msip34_0217 NC_012969.1 242836 244380 D TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: har:HEAR0028 alkyl hydroperoxide reductase subunit F (alkyl hydroperoxide reductase F52A protein); alkyl hydroperoxide reductase subunit F 242836..244380 Methylovorus glucosetrophus SIP3-4 8173495 YP_003049994.1 CDS Msip34_0218 NC_012969.1 244521 244802 R hypothetical protein complement(244521..244802) Methylovorus glucosetrophus SIP3-4 8173496 YP_003049995.1 CDS Msip34_0219 NC_012969.1 244953 245567 R TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: mfa:Mfla_0204 regulatory inactivation of DnaA Hda protein; sigma 54 interacting domain-containing protein complement(244953..245567) Methylovorus glucosetrophus SIP3-4 8173497 YP_003049996.1 CDS Msip34_0220 NC_012969.1 245621 246700 R PFAM: protein of unknown function UPF0118; KEGG: neu:NE0089 hypothetical protein; hypothetical protein complement(245621..246700) Methylovorus glucosetrophus SIP3-4 8173498 YP_003049997.1 CDS Msip34_0221 NC_012969.1 246759 247820 D KEGG: mfa:Mfla_0205 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 246759..247820 Methylovorus glucosetrophus SIP3-4 8173499 YP_003049998.1 CDS Msip34_0222 NC_012969.1 247883 248587 D KEGG: mfa:Mfla_0206 hypothetical protein; hypothetical protein 247883..248587 Methylovorus glucosetrophus SIP3-4 8173500 YP_003049999.1 CDS Msip34_0223 NC_012969.1 248577 249611 D KEGG: dar:Daro_3160 hypothetical protein; hypothetical protein 248577..249611 Methylovorus glucosetrophus SIP3-4 8173501 YP_003050000.1 CDS Msip34_0224 NC_012969.1 249608 250906 D PFAM: Fmu (Sun) domain protein; KEGG: mfa:Mfla_0208 Fmu (Sun); Fmu (Sun) domain-containing protein 249608..250906 Methylovorus glucosetrophus SIP3-4 8173502 YP_003050001.1 CDS Msip34_0225 NC_012969.1 251050 252279 D PFAM: sodium:dicarboxylate symporter; KEGG: nmu:Nmul_A0633 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 251050..252279 Methylovorus glucosetrophus SIP3-4 8173503 YP_003050002.1 CDS Msip34_0226 NC_012969.1 252474 252923 D TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: mfa:Mfla_0210 blue (type1) copper domain-containing protein; azurin 252474..252923 Methylovorus glucosetrophus SIP3-4 8173504 YP_003050003.1 CDS Msip34_0227 NC_012969.1 253178 254107 D PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: tbd:Tbd_1985 integral membrane protein, DUF6; hypothetical protein 253178..254107 Methylovorus glucosetrophus SIP3-4 8173505 YP_003050004.1 CDS Msip34_0228 NC_012969.1 254133 254678 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mfa:Mfla_0213 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(254133..254678) Methylovorus glucosetrophus SIP3-4 8173506 YP_003050005.1 CDS Msip34_0229 NC_012969.1 254762 255763 D PFAM: sodium/calcium exchanger membrane region; KEGG: tbd:Tbd_0802 Ca2+/H+ antiporter; sodium/calcium exchanger membrane region 254762..255763 Methylovorus glucosetrophus SIP3-4 8173507 YP_003050006.1 CDS Msip34_0230 NC_012969.1 255855 257186 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0214 two component, sigma54 specific, fis family transcriptional regulator; Fis family two component sigma54 specific transcriptional regulator complement(255855..257186) Methylovorus glucosetrophus SIP3-4 8173508 YP_003050007.1 CDS Msip34_0231 NC_012969.1 257179 258768 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_0215 signal transduction histidine kinase; histidine kinase complement(257179..258768) Methylovorus glucosetrophus SIP3-4 8173509 YP_003050008.1 CDS Msip34_0232 NC_012969.1 258758 259000 R KEGG: mfa:Mfla_0216 hypothetical protein; hypothetical protein complement(258758..259000) Methylovorus glucosetrophus SIP3-4 8173510 YP_003050009.1 CDS Msip34_0233 NC_012969.1 259199 259795 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 259199..259795 Methylovorus glucosetrophus SIP3-4 8173511 YP_003050010.1 CDS Msip34_0234 NC_012969.1 259792 260166 D KEGG: mfa:Mfla_0218 putative transmembrane protein; hypothetical protein 259792..260166 Methylovorus glucosetrophus SIP3-4 8173512 YP_003050011.1 CDS Msip34_0235 NC_012969.1 260142 260588 D KEGG: mfa:Mfla_0219 hypothetical protein; hypothetical protein 260142..260588 Methylovorus glucosetrophus SIP3-4 8173513 YP_003050012.1 CDS Msip34_0236 NC_012969.1 260622 261047 D PFAM: RDD domain containing protein; KEGG: nmu:Nmul_A1054 RDD; RDD domain-containing protein 260622..261047 Methylovorus glucosetrophus SIP3-4 8173514 YP_003050013.1 CDS Msip34_0237 NC_012969.1 261053 262123 R PFAM: permease YjgP/YjgQ family protein; KEGG: mfa:Mfla_0220 permease YjgP/YjgQ; permease complement(261053..262123) Methylovorus glucosetrophus SIP3-4 8173515 YP_003050014.1 CDS Msip34_0238 NC_012969.1 262120 263220 R PFAM: permease YjgP/YjgQ family protein; KEGG: mfa:Mfla_0221 permease YjgP/YjgQ; permease complement(262120..263220) Methylovorus glucosetrophus SIP3-4 8173516 YP_003050015.1 CDS Msip34_0239 NC_012969.1 263314 264819 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 263314..264819 Methylovorus glucosetrophus SIP3-4 8173517 YP_003050016.1 CDS Msip34_0240 NC_012969.1 264825 265253 D PFAM: DNA polymerase III chi subunit HolC; KEGG: mfa:Mfla_0223 DNA polymerase III, chi subunit; DNA polymerase III chi subunit HolC 264825..265253 Methylovorus glucosetrophus SIP3-4 8173518 YP_003050017.1 CDS Msip34_0241 NC_012969.1 265253 265639 D hypothetical protein 265253..265639 Methylovorus glucosetrophus SIP3-4 8173519 YP_003050018.1 CDS Msip34_0242 NC_012969.1 265699 266082 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: mfa:Mfla_0225 glycine cleavage system H protein; glycine cleavage system H protein complement(265699..266082) Methylovorus glucosetrophus SIP3-4 8173520 YP_003050019.1 CDS Msip34_0243 NC_012969.1 266283 267275 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mfa:Mfla_0226 murein-dd-endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 266283..267275 Methylovorus glucosetrophus SIP3-4 8173521 YP_003050020.1 CDS Msip34_0244 NC_012969.1 267508 270084 R KEGG: mfa:Mfla_0227 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I complement(267508..270084) Methylovorus glucosetrophus SIP3-4 8173522 YP_003050021.1 CDS Msip34_0245 NC_012969.1 270239 271237 R PFAM: PP-loop domain protein; KEGG: mfa:Mfla_0228 PP-loop; PP-loop domain-containing protein complement(270239..271237) Methylovorus glucosetrophus SIP3-4 8173523 YP_003050022.1 CDS Msip34_0246 NC_012969.1 271212 271964 R Involved in pteridine salvage and antifolate resistance; pteridine reductase complement(271212..271964) Methylovorus glucosetrophus SIP3-4 8173524 YP_003050023.1 CDS Msip34_0247 NC_012969.1 272013 273170 D PFAM: protein of unknown function DUF185; KEGG: mfa:Mfla_0230 hypothetical protein; hypothetical protein 272013..273170 Methylovorus glucosetrophus SIP3-4 8173525 YP_003050024.1 CDS trmB NC_012969.1 273244 273960 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 273244..273960 Methylovorus glucosetrophus SIP3-4 8173526 YP_003050025.1 CDS engB NC_012969.1 273965 274603 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(273965..274603) Methylovorus glucosetrophus SIP3-4 8173527 YP_003050026.1 CDS Msip34_0250 NC_012969.1 274728 275336 D PFAM: cytochrome c class I; KEGG: tbd:Tbd_0187 cytochrome c oxidase; class I cytochrome c 274728..275336 Methylovorus glucosetrophus SIP3-4 8173528 YP_003050027.1 CDS Msip34_0251 NC_012969.1 275429 277432 D PFAM: ResB family protein; KEGG: mfa:Mfla_0233 ResB-like protein; ResB family protein 275429..277432 Methylovorus glucosetrophus SIP3-4 8173529 YP_003050028.1 CDS Msip34_0252 NC_012969.1 277466 278611 D TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: mfa:Mfla_0234 cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 277466..278611 Methylovorus glucosetrophus SIP3-4 8173530 YP_003050029.1 CDS Msip34_0253 NC_012969.1 278621 280339 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_0235 ATP-binding region, ATPase-like protein; ATP-binding protein complement(278621..280339) Methylovorus glucosetrophus SIP3-4 8173531 YP_003050030.1 CDS Msip34_0254 NC_012969.1 280534 281178 D KEGG: tbd:Tbd_0540 hypothetical protein; hypothetical protein 280534..281178 Methylovorus glucosetrophus SIP3-4 8173532 YP_003050031.1 CDS Msip34_0255 NC_012969.1 281290 282096 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0237 ABC transporter related; ABC transporter-like protein 281290..282096 Methylovorus glucosetrophus SIP3-4 8173533 YP_003050032.1 CDS Msip34_0256 NC_012969.1 282089 282880 D PFAM: protein of unknown function DUF140; KEGG: mfa:Mfla_0238 hypothetical protein; hypothetical protein 282089..282880 Methylovorus glucosetrophus SIP3-4 8173534 YP_003050033.1 CDS Msip34_0257 NC_012969.1 282958 283437 D PFAM: Mammalian cell entry related domain protein; KEGG: mfa:Mfla_0239 hypothetical protein; mammalian cell entry domain-containing protein 282958..283437 Methylovorus glucosetrophus SIP3-4 8173535 YP_003050034.1 CDS Msip34_0258 NC_012969.1 283440 284048 D PFAM: toluene tolerance family protein; KEGG: mfa:Mfla_0240 toluene tolerance; toluene tolerance family protein 283440..284048 Methylovorus glucosetrophus SIP3-4 8173536 YP_003050035.1 CDS Msip34_0259 NC_012969.1 284060 284353 D KEGG: mfa:Mfla_0241 STAS domain-containing protein; hypothetical protein 284060..284353 Methylovorus glucosetrophus SIP3-4 8173537 YP_003050036.1 CDS Msip34_0260 NC_012969.1 284376 285287 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0242 ABC transporter related; ABC transporter-like protein 284376..285287 Methylovorus glucosetrophus SIP3-4 8173538 YP_003050037.1 CDS Msip34_0261 NC_012969.1 285284 286063 D PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_0243 hypothetical protein; ABC-2 type transporter 285284..286063 Methylovorus glucosetrophus SIP3-4 8173539 YP_003050038.1 CDS Msip34_0262 NC_012969.1 286065 286313 D PFAM: BolA family protein; KEGG: mfa:Mfla_0244 BolA-like protein; BolA family protein 286065..286313 Methylovorus glucosetrophus SIP3-4 8173540 YP_003050039.1 CDS Msip34_0263 NC_012969.1 286333 286653 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mfa:Mfla_0245 glutaredoxin-like protein; glutaredoxin-like protein 286333..286653 Methylovorus glucosetrophus SIP3-4 8173541 YP_003050040.1 CDS Msip34_0264 NC_012969.1 286696 287946 D TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: mfa:Mfla_0246 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 286696..287946 Methylovorus glucosetrophus SIP3-4 8173542 YP_003050041.1 CDS hisG NC_012969.1 287991 288641 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 287991..288641 Methylovorus glucosetrophus SIP3-4 8173770 YP_003050042.1 CDS hisD NC_012969.1 288651 289949 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 288651..289949 Methylovorus glucosetrophus SIP3-4 8173771 YP_003050043.1 CDS Msip34_0267 NC_012969.1 289946 291013 D TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: tbd:Tbd_1712 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 289946..291013 Methylovorus glucosetrophus SIP3-4 8173772 YP_003050044.1 CDS Msip34_0268 NC_012969.1 291191 291856 D TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mfa:Mfla_0250 hexulose-6-phosphate synthase; 3-hexulose-6-phosphate synthase 291191..291856 Methylovorus glucosetrophus SIP3-4 8173773 YP_003050045.1 CDS Msip34_0269 NC_012969.1 291955 292542 D PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: mfa:Mfla_0251 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 291955..292542 Methylovorus glucosetrophus SIP3-4 8173774 YP_003050046.1 CDS hisH NC_012969.1 292587 293231 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 292587..293231 Methylovorus glucosetrophus SIP3-4 8173775 YP_003050047.1 CDS Msip34_0271 NC_012969.1 293252 293992 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 293252..293992 Methylovorus glucosetrophus SIP3-4 8173776 YP_003050048.1 CDS Msip34_0272 NC_012969.1 293989 294747 D TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: mfa:Mfla_0254 imidazole glycerol phosphate synthase subunit HisF; Imidazole glycerol phosphate synthase cyclase subunit 293989..294747 Methylovorus glucosetrophus SIP3-4 8173777 YP_003050049.1 CDS hisI NC_012969.1 294744 295136 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 294744..295136 Methylovorus glucosetrophus SIP3-4 8173778 YP_003050050.1 CDS hisE NC_012969.1 295129 295446 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 295129..295446 Methylovorus glucosetrophus SIP3-4 8173779 YP_003050051.1 CDS Msip34_0275 NC_012969.1 295453 295791 D PFAM: histidine triad (HIT) protein; KEGG: mfa:Mfla_0257 histidine triad (HIT) protein; histidine triad (HIT) protein 295453..295791 Methylovorus glucosetrophus SIP3-4 8173780 YP_003050052.1 CDS tatA NC_012969.1 295815 296033 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 295815..296033 Methylovorus glucosetrophus SIP3-4 8173781 YP_003050053.1 CDS Msip34_0277 NC_012969.1 296049 296405 D TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mfa:Mfla_0259 sec-independent protein translocase TatB; twin-arginine translocation protein subunit TatB 296049..296405 Methylovorus glucosetrophus SIP3-4 8173782 YP_003050054.1 CDS Msip34_0278 NC_012969.1 296402 297130 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mfa:Mfla_0260 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC 296402..297130 Methylovorus glucosetrophus SIP3-4 8173783 YP_003050055.1 CDS Msip34_0279 NC_012969.1 297277 297399 D hypothetical protein 297277..297399 Methylovorus glucosetrophus SIP3-4 8173784 YP_003050056.1 CDS Msip34_0280 NC_012969.1 297433 298587 R KEGG: mfa:Mfla_0261 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase complement(297433..298587) Methylovorus glucosetrophus SIP3-4 8173785 YP_003050057.1 CDS Msip34_0281 NC_012969.1 298625 299371 D PFAM: protein of unknown function DUF34; KEGG: mfa:Mfla_0262 hypothetical protein; hypothetical protein 298625..299371 Methylovorus glucosetrophus SIP3-4 8173786 YP_003050058.1 CDS Msip34_0282 NC_012969.1 299468 300064 D KEGG: tbd:Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 299468..300064 Methylovorus glucosetrophus SIP3-4 8173787 YP_003050059.1 CDS Msip34_0283 NC_012969.1 300067 301350 D PFAM: Cytochrome b/b6 domain; KEGG: tbd:Tbd_1832 cytochrome b subunit of cytochrome bc1; cytochrome b/b6 protein 300067..301350 Methylovorus glucosetrophus SIP3-4 8173788 YP_003050060.1 CDS Msip34_0284 NC_012969.1 301350 302084 D PFAM: cytochrome c1; KEGG: nmu:Nmul_A1003 cytochrome c1; cytochrome c1 301350..302084 Methylovorus glucosetrophus SIP3-4 8173789 YP_003050061.1 CDS Msip34_0285 NC_012969.1 302153 302752 D PFAM: Glutathione S-transferase domain; KEGG: mfa:Mfla_0263 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 302153..302752 Methylovorus glucosetrophus SIP3-4 8173790 YP_003050062.1 CDS Msip34_0286 NC_012969.1 302757 303176 D PFAM: Stringent starvation protein B; KEGG: mfa:Mfla_0264 stringent starvation protein B; stringent starvation protein B 302757..303176 Methylovorus glucosetrophus SIP3-4 8173791 YP_003050063.1 CDS Msip34_0287 NC_012969.1 303664 304854 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 303664..304854 Methylovorus glucosetrophus SIP3-4 8173796 YP_003050064.1 CDS Msip34_0288 NC_012969.1 305024 305371 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mfa:Mfla_0266 protein translocase subunit SecE/sec61 gamma; preprotein translocase subunit SecE 305024..305371 Methylovorus glucosetrophus SIP3-4 8173798 YP_003050065.1 CDS Msip34_0289 NC_012969.1 305373 305909 D KEGG: mfa:Mfla_0267 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 305373..305909 Methylovorus glucosetrophus SIP3-4 8173799 YP_003050066.1 CDS Msip34_0290 NC_012969.1 306037 306468 D KEGG: mfa:Mfla_0268 50S ribosomal protein L11P; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 306037..306468 Methylovorus glucosetrophus SIP3-4 8173800 YP_003050067.1 CDS rplA NC_012969.1 306469 307161 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 306469..307161 Methylovorus glucosetrophus SIP3-4 8173801 YP_003050068.1 CDS rplJ NC_012969.1 307420 307944 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 307420..307944 Methylovorus glucosetrophus SIP3-4 8173802 YP_003050069.1 CDS Msip34_0293 NC_012969.1 307974 308354 D TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: mfa:Mfla_0271 50S ribosomal protein L12P; 50S ribosomal protein L7/L12 307974..308354 Methylovorus glucosetrophus SIP3-4 8173803 YP_003050070.1 CDS rpoB NC_012969.1 308480 312652 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 308480..312652 Methylovorus glucosetrophus SIP3-4 8173804 YP_003050071.1 CDS Msip34_0295 NC_012969.1 312664 316902 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 312664..316902 Methylovorus glucosetrophus SIP3-4 8173805 YP_003050072.1 CDS rpsL NC_012969.1 317012 317389 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 317012..317389 Methylovorus glucosetrophus SIP3-4 8173806 YP_003050073.1 CDS Msip34_0297 NC_012969.1 317429 317899 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 317429..317899 Methylovorus glucosetrophus SIP3-4 8173807 YP_003050074.1 CDS Msip34_0298 NC_012969.1 317927 320017 D TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: bph:Bphy_2843 translation elongation factor G; translation elongation factor G 317927..320017 Methylovorus glucosetrophus SIP3-4 8173808 YP_003050075.1 CDS Msip34_0299 NC_012969.1 320052 321242 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 320052..321242 Methylovorus glucosetrophus SIP3-4 8173809 YP_003050076.1 CDS rpsJ NC_012969.1 321320 321628 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 321320..321628 Methylovorus glucosetrophus SIP3-4 8173810 YP_003050077.1 CDS Msip34_0301 NC_012969.1 321740 322384 D PFAM: ribosomal protein L3; KEGG: mfa:Mfla_0279 50S ribosomal protein L3P; 50S ribosomal protein L3 321740..322384 Methylovorus glucosetrophus SIP3-4 8173811 YP_003050078.1 CDS Msip34_0302 NC_012969.1 322384 323010 D PFAM: ribosomal protein L4/L1e; KEGG: mfa:Mfla_0280 50S ribosomal protein L4P; 50S ribosomal protein L4 322384..323010 Methylovorus glucosetrophus SIP3-4 8173812 YP_003050079.1 CDS rplW NC_012969.1 323007 323327 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 323007..323327 Methylovorus glucosetrophus SIP3-4 8173813 YP_003050080.1 CDS rplB NC_012969.1 323336 324169 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 323336..324169 Methylovorus glucosetrophus SIP3-4 8173814 YP_003050081.1 CDS Msip34_0305 NC_012969.1 324175 324450 D TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: mfa:Mfla_0283 SSU ribosomal protein S19P; 30S ribosomal protein S19 324175..324450 Methylovorus glucosetrophus SIP3-4 8173815 YP_003050082.1 CDS Msip34_0306 NC_012969.1 324460 324789 D TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: mfa:Mfla_0284 50S ribosomal protein L22P; 50S ribosomal protein L22 324460..324789 Methylovorus glucosetrophus SIP3-4 8173816 YP_003050083.1 CDS rpsC NC_012969.1 324800 325513 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 324800..325513 Methylovorus glucosetrophus SIP3-4 8173817 YP_003050084.1 CDS rplP NC_012969.1 325497 325913 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 325497..325913 Methylovorus glucosetrophus SIP3-4 8173818 YP_003050085.1 CDS Msip34_0309 NC_012969.1 325916 326110 D TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: mfa:Mfla_0287 50S ribosomal protein L29P; 50S ribosomal protein L29 325916..326110 Methylovorus glucosetrophus SIP3-4 8173819 YP_003050086.1 CDS rpsQ NC_012969.1 326120 326395 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 326120..326395 Methylovorus glucosetrophus SIP3-4 8173820 YP_003050087.1 CDS Msip34_0311 NC_012969.1 326430 326528 D hypothetical protein 326430..326528 Methylovorus glucosetrophus SIP3-4 8173821 YP_003050088.1 CDS rplN NC_012969.1 326545 326913 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 326545..326913 Methylovorus glucosetrophus SIP3-4 8173822 YP_003050089.1 CDS rplX NC_012969.1 326924 327241 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 326924..327241 Methylovorus glucosetrophus SIP3-4 8173823 YP_003050090.1 CDS rplE NC_012969.1 327251 327790 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 327251..327790 Methylovorus glucosetrophus SIP3-4 8173824 YP_003050091.1 CDS rpsN NC_012969.1 327799 328104 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 327799..328104 Methylovorus glucosetrophus SIP3-4 8173825 YP_003050092.1 CDS Msip34_0316 NC_012969.1 328120 328515 D PFAM: ribosomal protein S8; KEGG: mfa:Mfla_0293 SSU ribosomal protein S8P; 30S ribosomal protein S8 328120..328515 Methylovorus glucosetrophus SIP3-4 8173826 YP_003050093.1 CDS Msip34_0317 NC_012969.1 328526 329059 D PFAM: ribosomal protein L6; KEGG: mfa:Mfla_0294 50S ribosomal protein L6P; 50S ribosomal protein L6 328526..329059 Methylovorus glucosetrophus SIP3-4 8173827 YP_003050094.1 CDS rplR NC_012969.1 329070 329423 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 329070..329423 Methylovorus glucosetrophus SIP3-4 8173828 YP_003050095.1 CDS rpsE NC_012969.1 329438 329944 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 329438..329944 Methylovorus glucosetrophus SIP3-4 8173829 YP_003050096.1 CDS Msip34_0320 NC_012969.1 329947 330144 D TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: mfa:Mfla_0297 50S ribosomal protein L30P; 50S ribosomal protein L30 329947..330144 Methylovorus glucosetrophus SIP3-4 8173830 YP_003050097.1 CDS Msip34_0321 NC_012969.1 330144 330578 D TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: mfa:Mfla_0298 50S ribosomal protein L15P; 50S ribosomal protein L15 330144..330578 Methylovorus glucosetrophus SIP3-4 8173831 YP_003050098.1 CDS secY NC_012969.1 330586 331908 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 330586..331908 Methylovorus glucosetrophus SIP3-4 8173832 YP_003050099.1 CDS infA NC_012969.1 331927 332145 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 331927..332145 Methylovorus glucosetrophus SIP3-4 8173833 YP_003050100.1 CDS Msip34_0324 NC_012969.1 332168 332281 D TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: mfa:Mfla_0301 50S ribosomal protein L36P; 50S ribosomal protein L36 332168..332281 Methylovorus glucosetrophus SIP3-4 8173834 YP_003050101.1 CDS rpsM NC_012969.1 332410 332772 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 332410..332772 Methylovorus glucosetrophus SIP3-4 8173835 YP_003050102.1 CDS Msip34_0326 NC_012969.1 332786 333175 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 332786..333175 Methylovorus glucosetrophus SIP3-4 8173836 YP_003050103.1 CDS rpsD NC_012969.1 333205 333834 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 333205..333834 Methylovorus glucosetrophus SIP3-4 8173837 YP_003050104.1 CDS Msip34_0328 NC_012969.1 333856 334839 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 333856..334839 Methylovorus glucosetrophus SIP3-4 8173838 YP_003050105.1 CDS Msip34_0329 NC_012969.1 334864 335253 D TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: mfa:Mfla_0305 50S ribosomal protein L17P; 50S ribosomal protein L17 334864..335253 Methylovorus glucosetrophus SIP3-4 8173839 YP_003050106.1 CDS Msip34_0330 NC_012969.1 335300 335545 R PFAM: glutaredoxin 2; KEGG: spc:Sputcn32_1633 glutaredoxin 2; glutaredoxin complement(335300..335545) Methylovorus glucosetrophus SIP3-4 8173840 YP_003050107.1 CDS Msip34_0331 NC_012969.1 335727 337163 D TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; KEGG: mfa:Mfla_0306 magnesium transporter; magnesium transporter 335727..337163 Methylovorus glucosetrophus SIP3-4 8173841 YP_003050108.1 CDS Msip34_0332 NC_012969.1 337160 338452 D PFAM: MscS Mechanosensitive ion channel; KEGG: mfa:Mfla_0307 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 337160..338452 Methylovorus glucosetrophus SIP3-4 8173842 YP_003050109.1 CDS Msip34_0333 NC_012969.1 338495 339679 D PFAM: fatty acid desaturase; KEGG: nmu:Nmul_A2141 fatty acid desaturase; fatty acid desaturase 338495..339679 Methylovorus glucosetrophus SIP3-4 8173843 YP_003050110.1 CDS rpmG NC_012969.1 339823 339978 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(339823..339978) Methylovorus glucosetrophus SIP3-4 8172949 YP_003050111.1 CDS rpmB NC_012969.1 339988 340224 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(339988..340224) Methylovorus glucosetrophus SIP3-4 8172950 YP_003050112.1 CDS Msip34_0336 NC_012969.1 340300 340752 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: mfa:Mfla_0313 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(340300..340752) Methylovorus glucosetrophus SIP3-4 8172951 YP_003050113.1 CDS Msip34_0337 NC_012969.1 340749 341990 R KEGG: mfa:Mfla_0314 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(340749..341990) Methylovorus glucosetrophus SIP3-4 8172952 YP_003050114.1 CDS Msip34_0338 NC_012969.1 342053 342817 D KEGG: abc:ACICU_00449 hypothetical protein; hypothetical protein 342053..342817 Methylovorus glucosetrophus SIP3-4 8172953 YP_003050115.1 CDS Msip34_0339 NC_012969.1 342831 343505 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: mfa:Mfla_0315 DNA repair protein RadC; DNA repair protein RadC 342831..343505 Methylovorus glucosetrophus SIP3-4 8172954 YP_003050116.1 CDS Msip34_0340 NC_012969.1 343528 344409 R PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_1063 transglutaminase domain-containing protein; transglutaminase domain-containing protein complement(343528..344409) Methylovorus glucosetrophus SIP3-4 8172955 YP_003050117.1 CDS Msip34_0341 NC_012969.1 344416 346953 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: pna:Pnap_1064 hypothetical protein; hypothetical protein complement(344416..346953) Methylovorus glucosetrophus SIP3-4 8172956 YP_003050118.1 CDS Msip34_0342 NC_012969.1 346963 350253 R PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_1065 transglutaminase domain-containing protein; transglutaminase domain-containing protein complement(346963..350253) Methylovorus glucosetrophus SIP3-4 8172957 YP_003050119.1 CDS Msip34_0343 NC_012969.1 350580 350885 R KEGG: mfa:Mfla_0333 hypothetical protein; hypothetical protein complement(350580..350885) Methylovorus glucosetrophus SIP3-4 8172958 YP_003050120.1 CDS Msip34_0344 NC_012969.1 350901 353615 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: tbd:Tbd_2310 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; molybdopterin oxidoreductase complement(350901..353615) Methylovorus glucosetrophus SIP3-4 8172959 YP_003050121.1 CDS Msip34_0345 NC_012969.1 353743 354057 R TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: dar:Daro_0817 assimilatory nitrite reductase (NAD(P)H) small subunit; nitrite reductase (NAD(P)H) small subunit complement(353743..354057) Methylovorus glucosetrophus SIP3-4 8172960 YP_003050122.1 CDS Msip34_0346 NC_012969.1 354163 355857 R PFAM: Protein phosphatase 2C-like; tyrosine protein kinase; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mfa:Mfla_0320 protein serine/threonine phosphatases; protein serine/threonine phosphatase complement(354163..355857) Methylovorus glucosetrophus SIP3-4 8172961 YP_003050123.1 CDS Msip34_0347 NC_012969.1 355865 357076 R TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_0321 nitrate transporter; nitrite transporter complement(355865..357076) Methylovorus glucosetrophus SIP3-4 8172962 YP_003050124.1 CDS Msip34_0348 NC_012969.1 357156 359582 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: tbd:Tbd_2309 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; nitrite reductase (NAD(P)H) large subunit complement(357156..359582) Methylovorus glucosetrophus SIP3-4 8172963 YP_003050125.1 CDS Msip34_0349 NC_012969.1 359607 360353 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0322 uroporphyrinogen-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(359607..360353) Methylovorus glucosetrophus SIP3-4 8172964 YP_003050126.1 CDS Msip34_0350 NC_012969.1 360402 361070 R KEGG: mfa:Mfla_0323 putative methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(360402..361070) Methylovorus glucosetrophus SIP3-4 8172965 YP_003050127.1 CDS Msip34_0351 NC_012969.1 361151 362470 R KEGG: mfa:Mfla_0324 hypothetical protein; hypothetical protein complement(361151..362470) Methylovorus glucosetrophus SIP3-4 8172966 YP_003050128.1 CDS Msip34_0352 NC_012969.1 362573 363379 R KEGG: mfa:Mfla_0325 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(362573..363379) Methylovorus glucosetrophus SIP3-4 8172967 YP_003050129.1 CDS Msip34_0353 NC_012969.1 363390 364307 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0326 nitrate transport permease; nitrate ABC transporter inner membrane subunit complement(363390..364307) Methylovorus glucosetrophus SIP3-4 8172968 YP_003050130.1 CDS Msip34_0354 NC_012969.1 364373 365662 R KEGG: mfa:Mfla_0327 nitrate transporter periplasmic component; nitrate transporter periplasmic protein complement(364373..365662) Methylovorus glucosetrophus SIP3-4 8172969 YP_003050131.1 CDS Msip34_0355 NC_012969.1 366080 367351 R PFAM: Nitrate and nitrite sensing domain protein; ANTAR domain protein; KEGG: mfa:Mfla_0329 response regulator receiver/ANTAR domain-containing protein; ANTAR domain-containing protein complement(366080..367351) Methylovorus glucosetrophus SIP3-4 8172970 YP_003050132.1 CDS Msip34_0356 NC_012969.1 367555 368277 R hypothetical protein complement(367555..368277) Methylovorus glucosetrophus SIP3-4 8172971 YP_003050133.1 CDS Msip34_0357 NC_012969.1 368326 370212 R KEGG: azo:azo3632 ABC transporter permease and ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; lipid A ABC exporter family, fused ATPase and inner membrane subunits complement(368326..370212) Methylovorus glucosetrophus SIP3-4 8172972 YP_003050135.1 CDS Msip34_0359 NC_012969.1 370648 370806 D KEGG: pol:Bpro_2400 hypothetical protein; hypothetical protein 370648..370806 Methylovorus glucosetrophus SIP3-4 8172974 YP_003050136.1 CDS Msip34_0360 NC_012969.1 370853 371077 D KEGG: spe:Spro_2645 lipoprotein; lipoprotein 370853..371077 Methylovorus glucosetrophus SIP3-4 8172975 YP_003050137.1 CDS Msip34_0361 NC_012969.1 371317 373386 D PFAM: carbon starvation protein CstA; KEGG: mfa:Mfla_0334 carbon starvation protein CstA; carbon starvation protein CstA 371317..373386 Methylovorus glucosetrophus SIP3-4 8172976 YP_003050138.1 CDS Msip34_0362 NC_012969.1 373371 373568 D PFAM: protein of unknown function DUF466; KEGG: mfa:Mfla_0335 hypothetical protein; hypothetical protein 373371..373568 Methylovorus glucosetrophus SIP3-4 8172977 YP_003050139.1 CDS Msip34_0363 NC_012969.1 373541 373852 D KEGG: pnu:Pnuc_1609 hypothetical protein; hypothetical protein 373541..373852 Methylovorus glucosetrophus SIP3-4 8172978 YP_003050140.1 CDS Msip34_0365 NC_012969.1 374340 374573 D KEGG: asa:ASA_P5G016 hypothetical protein; hypothetical protein 374340..374573 Methylovorus glucosetrophus SIP3-4 8172980 YP_003050141.1 CDS Msip34_0366 NC_012969.1 374651 375034 D KEGG: bbr:BB4142 hypothetical protein; hypothetical protein 374651..375034 Methylovorus glucosetrophus SIP3-4 8172981 YP_003050142.1 CDS Msip34_0367 NC_012969.1 375110 375901 D KEGG: sml:Smlt2493 hypothetical protein; hypothetical protein 375110..375901 Methylovorus glucosetrophus SIP3-4 8172982 YP_003050143.1 CDS Msip34_0368 NC_012969.1 375992 376915 D KEGG: rpt:Rpal_3157 hypothetical protein; hypothetical protein 375992..376915 Methylovorus glucosetrophus SIP3-4 8172983 YP_003050144.1 CDS Msip34_0369 NC_012969.1 377048 377269 R hypothetical protein complement(377048..377269) Methylovorus glucosetrophus SIP3-4 8172984 YP_003050145.1 CDS Msip34_0370 NC_012969.1 377812 378594 R TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mfa:Mfla_0339 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(377812..378594) Methylovorus glucosetrophus SIP3-4 8172985 YP_003050146.1 CDS Msip34_0371 NC_012969.1 378733 381219 D KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 378733..381219 Methylovorus glucosetrophus SIP3-4 8172986 YP_003050147.1 CDS Msip34_0372 NC_012969.1 381365 383185 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 381365..383185 Methylovorus glucosetrophus SIP3-4 8172987 YP_003050148.1 CDS Msip34_0373 NC_012969.1 383208 384122 D PFAM: Aldose 1-epimerase; KEGG: mfa:Mfla_0341 aldose 1-epimerase; aldose 1-epimerase 383208..384122 Methylovorus glucosetrophus SIP3-4 8172988 YP_003050149.1 CDS Msip34_0374 NC_012969.1 384380 384706 D PFAM: cytochrome c class I; KEGG: mfa:Mfla_0342 cytochrome c, class I; class I cytochrome c 384380..384706 Methylovorus glucosetrophus SIP3-4 8172989 YP_003050150.1 CDS Msip34_0375 NC_012969.1 384817 385170 R PFAM: Endoribonuclease L-PSP; KEGG: lch:Lcho_2329 endoribonuclease L-PSP; endoribonuclease L-PSP complement(384817..385170) Methylovorus glucosetrophus SIP3-4 8172990 YP_003050151.1 CDS Msip34_0376 NC_012969.1 385176 386582 R PFAM: amino acid permease-associated region; KEGG: mfa:Mfla_0345 amino acid permease-associated region; amino acid permease-associated protein complement(385176..386582) Methylovorus glucosetrophus SIP3-4 8172991 YP_003050152.1 CDS Msip34_0377 NC_012969.1 386631 387953 R TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: wsu:WS1301 putative sodium/alanine symporter; amino acid carrier protein complement(386631..387953) Methylovorus glucosetrophus SIP3-4 8172992 YP_003050153.1 CDS Msip34_0378 NC_012969.1 388004 388903 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(388004..388903) Methylovorus glucosetrophus SIP3-4 8172993 YP_003050154.1 CDS Msip34_0379 NC_012969.1 388917 389462 R PFAM: SUA5/yciO/yrdC domain; KEGG: mfa:Mfla_0347 SUA5/YciO/YrdC-like protein; SUA5/yciO/yrdC domain-containing protein complement(388917..389462) Methylovorus glucosetrophus SIP3-4 8172994 YP_003050155.1 CDS Msip34_0380 NC_012969.1 389475 390743 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(389475..390743) Methylovorus glucosetrophus SIP3-4 8172995 YP_003050156.1 CDS purH NC_012969.1 390843 392429 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(390843..392429) Methylovorus glucosetrophus SIP3-4 8172996 YP_003050157.1 CDS Msip34_0382 NC_012969.1 392542 392775 R PFAM: helix-turn-helix Fis-type; KEGG: mfa:Mfla_0350 helix-turn-helix, fis-type; Fis family transcriptional regulator complement(392542..392775) Methylovorus glucosetrophus SIP3-4 8172997 YP_003050158.1 CDS Msip34_0383 NC_012969.1 392778 393830 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: mfa:Mfla_0351 dihydrouridine synthase TIM-barrel protein nifR3; nifR3 family TIM-barrel protein complement(392778..393830) Methylovorus glucosetrophus SIP3-4 8172998 YP_003050159.1 CDS Msip34_0384 NC_012969.1 394121 395392 D PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: pap:PSPA7_1369 MFS family transporter; major facilitator superfamily protein 394121..395392 Methylovorus glucosetrophus SIP3-4 8172999 YP_003050160.1 CDS Msip34_0385 NC_012969.1 395373 395633 R PFAM: protein of unknown function UPF0153; KEGG: dia:Dtpsy_0043 protein of unknown function UPF0153; hypothetical protein complement(395373..395633) Methylovorus glucosetrophus SIP3-4 8173000 YP_003050161.1 CDS Msip34_0386 NC_012969.1 395633 396373 R PFAM: molybdopterin binding domain; KEGG: mfa:Mfla_0357 molybdopterin binding domain-containing protein; molybdopterin-binding domain-containing protein complement(395633..396373) Methylovorus glucosetrophus SIP3-4 8173001 YP_003050162.1 CDS Msip34_0387 NC_012969.1 396523 396792 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: NIR_1; NADPH nitrite reductase; K00362 nitrite reductase (NAD(P)H) large subunit; (2fe-2S)-binding domain-containing protein 396523..396792 Methylovorus glucosetrophus SIP3-4 8173002 YP_003050163.1 CDS Msip34_0388 NC_012969.1 396836 399592 R KEGG: mfa:Mfla_0358 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease; DNA polymerase I complement(396836..399592) Methylovorus glucosetrophus SIP3-4 8173003 YP_003050164.1 CDS Msip34_0389 NC_012969.1 399695 400423 D PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0359 hypothetical protein; hypothetical protein 399695..400423 Methylovorus glucosetrophus SIP3-4 8173004 YP_003050165.1 CDS Msip34_0390 NC_012969.1 400536 400868 D KEGG: mfa:Mfla_0360 hypothetical protein; hypothetical protein 400536..400868 Methylovorus glucosetrophus SIP3-4 8173005 YP_003050166.1 CDS Msip34_0391 NC_012969.1 400917 401867 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 400917..401867 Methylovorus glucosetrophus SIP3-4 8173006 YP_003050167.1 CDS Msip34_0392 NC_012969.1 401906 402703 D KEGG: mfa:Mfla_0362 hypothetical protein; hypothetical protein 401906..402703 Methylovorus glucosetrophus SIP3-4 8173007 YP_003050168.1 CDS Msip34_0393 NC_012969.1 402777 404939 R PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_0363 ATP-dependent DNA helicase UvrD; UvrD/REP helicase complement(402777..404939) Methylovorus glucosetrophus SIP3-4 8173008 YP_003050169.1 CDS Msip34_0394 NC_012969.1 405372 405884 R PFAM: OmpA/MotB domain protein; KEGG: pfl:PFL_0745 OmpA family protein; OmpA/MotB domain-containing protein complement(405372..405884) Methylovorus glucosetrophus SIP3-4 8173009 YP_003050170.1 CDS Msip34_0395 NC_012969.1 405980 407209 R KEGG: spe:Spro_0673 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(405980..407209) Methylovorus glucosetrophus SIP3-4 8173010 YP_003050171.1 CDS Msip34_0396 NC_012969.1 407206 407730 R KEGG: pfs:PFLU5211 hypothetical protein; hypothetical protein complement(407206..407730) Methylovorus glucosetrophus SIP3-4 8173011 YP_003050172.1 CDS Msip34_0397 NC_012969.1 407930 409333 R KEGG: dar:Daro_2258 heavy metal sensor kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase complement(407930..409333) Methylovorus glucosetrophus SIP3-4 8173012 YP_003050173.1 CDS Msip34_0398 NC_012969.1 409336 410016 R KEGG: tgr:Tgr7_1208 two component heavy metal response transcriptional regulator, winged helix family; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family complement(409336..410016) Methylovorus glucosetrophus SIP3-4 8173013 YP_003050174.1 CDS Msip34_0399 NC_012969.1 410180 411568 D KEGG: mpt:Mpe_A1633 putative copper resistance-related lipoprotein; putative copper resistance-like lipoprotein 410180..411568 Methylovorus glucosetrophus SIP3-4 8173014 YP_003050175.1 CDS Msip34_0400 NC_012969.1 411616 412995 D PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: mfa:Mfla_1080 twin-arginine translocation pathway signal; multicopper oxidase type 3 411616..412995 Methylovorus glucosetrophus SIP3-4 8173015 YP_003050176.1 CDS Msip34_0401 NC_012969.1 413014 413397 D KEGG: pna:Pnap_4560 hypothetical protein; hypothetical protein 413014..413397 Methylovorus glucosetrophus SIP3-4 8173016 YP_003050177.1 CDS Msip34_0402 NC_012969.1 413545 415188 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mfa:Mfla_0364 chaperonin GroEL; chaperonin GroEL complement(413545..415188) Methylovorus glucosetrophus SIP3-4 8173017 YP_003050178.1 CDS groES NC_012969.1 415234 415524 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(415234..415524) Methylovorus glucosetrophus SIP3-4 8173018 YP_003050179.1 CDS Msip34_0404 NC_012969.1 415756 417177 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: azc:AZC_3902 putative cylclic diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(415756..417177) Methylovorus glucosetrophus SIP3-4 8173019 YP_003050180.1 CDS Msip34_0405 NC_012969.1 417726 418217 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mfa:Mfla_0161 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 417726..418217 Methylovorus glucosetrophus SIP3-4 8173020 YP_003050181.1 CDS Msip34_0406 NC_012969.1 418414 420657 D SMART: helicase c2; KEGG: pol:Bpro_1361 helicase C2; helicase c2 418414..420657 Methylovorus glucosetrophus SIP3-4 8173021 YP_003050182.1 CDS Msip34_0407 NC_012969.1 420718 421842 R KEGG: mfa:Mfla_0558 DNA topoisomerase, type I, putative; DNA topoisomerase complement(420718..421842) Methylovorus glucosetrophus SIP3-4 8173022 YP_003050183.1 CDS Msip34_0408 NC_012969.1 422027 422389 D KEGG: mfa:Mfla_2565 hypothetical protein; hypothetical protein 422027..422389 Methylovorus glucosetrophus SIP3-4 8173023 YP_003050184.1 CDS Msip34_0409 NC_012969.1 422390 423805 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B3939 GntR family transcriptional regulator; aminotransferase domain-containing GntR family transcriptional regulator complement(422390..423805) Methylovorus glucosetrophus SIP3-4 8173024 YP_003050185.1 CDS Msip34_0410 NC_012969.1 423933 425372 D TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: mfa:Mfla_1045 4Fe-4S ferredoxin, iron-sulfur binding; cytochrome c oxidase accessory protein CcoG 423933..425372 Methylovorus glucosetrophus SIP3-4 8173025 YP_003050186.1 CDS Msip34_0411 NC_012969.1 425506 426837 D KEGG: bcm:Bcenmc03_6097 hypothetical protein; hypothetical protein 425506..426837 Methylovorus glucosetrophus SIP3-4 8173026 YP_003050187.1 CDS Msip34_0412 NC_012969.1 426834 427259 D KEGG: bcm:Bcenmc03_6096 hypothetical protein; hypothetical protein 426834..427259 Methylovorus glucosetrophus SIP3-4 8173027 YP_003050188.1 CDS Msip34_0413 NC_012969.1 427265 429481 R KEGG: mfa:Mfla_1183 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(427265..429481) Methylovorus glucosetrophus SIP3-4 8173028 YP_003050189.1 CDS Msip34_0414 NC_012969.1 429491 431695 R PFAM: Metal-dependent hydrolase HDOD; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; metal-dependent phosphohydrolase HD region; KEGG: mfa:Mfla_1184 histidine kinase; histidine kinase complement(429491..431695) Methylovorus glucosetrophus SIP3-4 8172787 YP_003050190.1 CDS Msip34_0415 NC_012969.1 432091 434502 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mms:mma_0756 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(432091..434502) Methylovorus glucosetrophus SIP3-4 8172544 YP_003050191.1 CDS Msip34_0416 NC_012969.1 434618 435610 R PFAM: FecR protein; KEGG: neu:NE0534 putative transmembrane sensor; anti-FecI sigma factor FecR complement(434618..435610) Methylovorus glucosetrophus SIP3-4 8172545 YP_003050192.1 CDS Msip34_0417 NC_012969.1 435613 436140 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: neu:NE0533 RNA polymerase ECF-subfamily sigma-70 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(435613..436140) Methylovorus glucosetrophus SIP3-4 8172546 YP_003050193.1 CDS Msip34_0418 NC_012969.1 436153 437412 R PFAM: PepSY-associated TM helix domain protein; KEGG: pmy:Pmen_4555 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein complement(436153..437412) Methylovorus glucosetrophus SIP3-4 8172547 YP_003050194.1 CDS Msip34_0419 NC_012969.1 437623 438147 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: mms:mma_2027 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 437623..438147 Methylovorus glucosetrophus SIP3-4 8172548 YP_003050195.1 CDS Msip34_0420 NC_012969.1 438161 439207 D PFAM: FecR protein; KEGG: neu:NE1095 putative transmembrane sensor; anti-FecI sigma factor FecR 438161..439207 Methylovorus glucosetrophus SIP3-4 8172549 YP_003050196.1 CDS Msip34_0421 NC_012969.1 439304 441787 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mms:mma_3483 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; TonB-dependent siderophore receptor 439304..441787 Methylovorus glucosetrophus SIP3-4 8172550 YP_003050197.1 CDS Msip34_0422 NC_012969.1 441873 442265 D KEGG: pfl:PFL_0985 hypothetical protein; hypothetical protein 441873..442265 Methylovorus glucosetrophus SIP3-4 8172551 YP_003050198.1 CDS Msip34_0423 NC_012969.1 442262 443908 D PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_2644 hypothetical protein; PepSY-associated TM helix domain-containing protein 442262..443908 Methylovorus glucosetrophus SIP3-4 8172552 YP_003050199.1 CDS Msip34_0424 NC_012969.1 443905 444267 D KEGG: reh:H16_B0119 putative iron uptake protein; putative iron uptake protein 443905..444267 Methylovorus glucosetrophus SIP3-4 8172553 YP_003050200.1 CDS Msip34_0425 NC_012969.1 444342 444986 D KEGG: mms:mma_3481 hypothetical protein; hypothetical protein 444342..444986 Methylovorus glucosetrophus SIP3-4 8172554 YP_003050201.1 CDS Msip34_0426 NC_012969.1 445069 446232 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1082 hypothetical protein; RND family efflux transporter MFP subunit 445069..446232 Methylovorus glucosetrophus SIP3-4 8172555 YP_003050202.1 CDS Msip34_0427 NC_012969.1 446229 448235 D PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: ppw:PputW619_3534 ABC transporter related; ABC transporter-like protein 446229..448235 Methylovorus glucosetrophus SIP3-4 8172556 YP_003050203.1 CDS Msip34_0428 NC_012969.1 448235 449719 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_3478 outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 448235..449719 Methylovorus glucosetrophus SIP3-4 8172557 YP_003050204.1 CDS Msip34_0429 NC_012969.1 449836 450408 D KEGG: mfa:Mfla_0376 hypothetical protein; hypothetical protein 449836..450408 Methylovorus glucosetrophus SIP3-4 8172558 YP_003050205.1 CDS Msip34_0430 NC_012969.1 450430 451761 D TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mfa:Mfla_0377 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 450430..451761 Methylovorus glucosetrophus SIP3-4 8172559 YP_003050206.1 CDS Msip34_0431 NC_012969.1 451767 453209 D KEGG: mfa:Mfla_0378 D-alanyl-D-alanine carboxypeptidase PBP3; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 451767..453209 Methylovorus glucosetrophus SIP3-4 8172560 YP_003050207.1 CDS Msip34_0432 NC_012969.1 453286 453384 R hypothetical protein complement(453286..453384) Methylovorus glucosetrophus SIP3-4 8172561 YP_003050208.1 CDS Msip34_0433 NC_012969.1 453410 453877 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mfa:Mfla_0379 peptidylprolyl isomerase; peptidyl-prolyl isomerase 453410..453877 Methylovorus glucosetrophus SIP3-4 8172562 YP_003050209.1 CDS Msip34_0434 NC_012969.1 453936 454358 D PFAM: OsmC family protein; KEGG: mfa:Mfla_0380 OsmC-like protein; OsmC family protein 453936..454358 Methylovorus glucosetrophus SIP3-4 8172563 YP_003050210.1 CDS Msip34_0435 NC_012969.1 454355 454759 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mfa:Mfla_0381 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 454355..454759 Methylovorus glucosetrophus SIP3-4 8172564 YP_003050211.1 CDS Msip34_0436 NC_012969.1 454837 456960 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hch:HCH_01398 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; TonB-dependent siderophore receptor complement(454837..456960) Methylovorus glucosetrophus SIP3-4 8172565 YP_003050212.1 CDS Msip34_0437 NC_012969.1 457192 457506 R KEGG: mfa:Mfla_0382 hypothetical protein; hypothetical protein complement(457192..457506) Methylovorus glucosetrophus SIP3-4 8172566 YP_003050213.1 CDS Msip34_0438 NC_012969.1 457525 458181 R KEGG: lhk:LHK_01370 ubiquinone biosynthesis protein COQ7; ubiquinone biosynthesis protein COQ7 complement(457525..458181) Methylovorus glucosetrophus SIP3-4 8172567 YP_003050214.1 CDS Msip34_0439 NC_012969.1 458198 459613 R KEGG: mfa:Mfla_0383 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(458198..459613) Methylovorus glucosetrophus SIP3-4 8172568 YP_003050215.1 CDS Msip34_0440 NC_012969.1 459810 460085 D TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: mfa:Mfla_0384 SelT/SelW/SelH selenoprotein; hypothetical protein 459810..460085 Methylovorus glucosetrophus SIP3-4 8172569 YP_003050216.1 CDS Msip34_0441 NC_012969.1 460216 461004 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_0385 diguanylate phosphodiesterase; diguanylate phosphodiesterase 460216..461004 Methylovorus glucosetrophus SIP3-4 8172570 YP_003050217.1 CDS Msip34_0442 NC_012969.1 461058 461594 R PFAM: NLP/P60 protein; KEGG: mfa:Mfla_0388 NLP/P60; NLP/P60 protein complement(461058..461594) Methylovorus glucosetrophus SIP3-4 8172571 YP_003050218.1 CDS Msip34_0443 NC_012969.1 461726 462043 D hypothetical protein 461726..462043 Methylovorus glucosetrophus SIP3-4 8172572 YP_003050219.1 CDS Msip34_0444 NC_012969.1 462098 463777 D PFAM: ABC-1 domain protein; KEGG: mfa:Mfla_0390 2-octaprenylphenol hydroxylase; ABC-1 domain-containing protein 462098..463777 Methylovorus glucosetrophus SIP3-4 8172573 YP_003050220.1 CDS Msip34_0445 NC_012969.1 463929 465359 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mfa:Mfla_0391 hypothetical protein; hypothetical protein 463929..465359 Methylovorus glucosetrophus SIP3-4 8172574 YP_003050221.1 CDS Msip34_0446 NC_012969.1 465460 466407 D PFAM: protein of unknown function DUF403; KEGG: mfa:Mfla_0392 hypothetical protein; hypothetical protein 465460..466407 Methylovorus glucosetrophus SIP3-4 8172575 YP_003050222.1 CDS Msip34_0447 NC_012969.1 466430 467239 D PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: mfa:Mfla_0393 transglutaminase-like protein; transglutaminase domain-containing protein 466430..467239 Methylovorus glucosetrophus SIP3-4 8172576 YP_003050223.1 CDS Msip34_0448 NC_012969.1 467270 468487 D KEGG: mfa:Mfla_0394 hypothetical protein; hypothetical protein 467270..468487 Methylovorus glucosetrophus SIP3-4 8172577 YP_003050224.1 CDS Msip34_0449 NC_012969.1 468565 470481 D PFAM: peptidase U32; KEGG: mfa:Mfla_0396 peptidase U32; peptidase U32 468565..470481 Methylovorus glucosetrophus SIP3-4 8172578 YP_003050225.1 CDS Msip34_0450 NC_012969.1 470609 470869 D KEGG: rpt:Rpal_5188 putative exported protein of unknown function; hypothetical protein 470609..470869 Methylovorus glucosetrophus SIP3-4 8172579 YP_003050226.1 CDS Msip34_0451 NC_012969.1 471570 472016 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 471570..472016 Methylovorus glucosetrophus SIP3-4 8172581 YP_003050227.1 CDS mraW NC_012969.1 472013 472978 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mfa:Mfla_2277 methyltransferase; S-adenosyl-methyltransferase MraW 472013..472978 Methylovorus glucosetrophus SIP3-4 8172582 YP_003050228.1 CDS Msip34_0453 NC_012969.1 472984 473256 D TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: mfa:Mfla_2276 cell division protein, FtsL -like protein; cell division protein FtsL 472984..473256 Methylovorus glucosetrophus SIP3-4 8172583 YP_003050229.1 CDS Msip34_0454 NC_012969.1 473253 474983 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mfa:Mfla_2275 peptidoglycan synthetase FtsI; peptidoglycan glycosyltransferase 473253..474983 Methylovorus glucosetrophus SIP3-4 8172584 YP_003050230.1 CDS Msip34_0455 NC_012969.1 474983 476416 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2274 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 474983..476416 Methylovorus glucosetrophus SIP3-4 8172585 YP_003050231.1 CDS Msip34_0456 NC_012969.1 476413 477786 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2273 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 476413..477786 Methylovorus glucosetrophus SIP3-4 8172586 YP_003050232.1 CDS mraY NC_012969.1 477786 478889 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 477786..478889 Methylovorus glucosetrophus SIP3-4 8172587 YP_003050233.1 CDS Msip34_0458 NC_012969.1 478907 480289 D TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2271 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 478907..480289 Methylovorus glucosetrophus SIP3-4 8172588 YP_003050234.1 CDS Msip34_0459 NC_012969.1 480286 481449 D TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mfa:Mfla_2270 cell cycle protein; cell division protein FtsW 480286..481449 Methylovorus glucosetrophus SIP3-4 8172589 YP_003050235.1 CDS murG NC_012969.1 481577 482683 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 481577..482683 Methylovorus glucosetrophus SIP3-4 8172590 YP_003050236.1 CDS murC NC_012969.1 482680 484077 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 482680..484077 Methylovorus glucosetrophus SIP3-4 8172591 YP_003050237.1 CDS murB NC_012969.1 484074 485006 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 484074..485006 Methylovorus glucosetrophus SIP3-4 8172592 YP_003050238.1 CDS ddl NC_012969.1 485007 485969 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 485007..485969 Methylovorus glucosetrophus SIP3-4 8172593 YP_003050239.1 CDS Msip34_0464 NC_012969.1 485959 486714 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mfa:Mfla_2265 cell division protein FtsQ; cell division protein FtsQ 485959..486714 Methylovorus glucosetrophus SIP3-4 8172594 YP_003050240.1 CDS Msip34_0465 NC_012969.1 486752 487990 D TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: mfa:Mfla_2264 cell division protein FtsA; cell division protein FtsA 486752..487990 Methylovorus glucosetrophus SIP3-4 8172595 YP_003050241.1 CDS Msip34_0466 NC_012969.1 488070 489239 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 488070..489239 Methylovorus glucosetrophus SIP3-4 8172596 YP_003050242.1 CDS lpxC NC_012969.1 489483 490412 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 489483..490412 Methylovorus glucosetrophus SIP3-4 8172597 YP_003050243.1 CDS Msip34_0468 NC_012969.1 490429 490611 D KEGG: dar:Daro_3491 hypothetical protein; hypothetical protein 490429..490611 Methylovorus glucosetrophus SIP3-4 8172598 YP_003050244.1 CDS Msip34_0469 NC_012969.1 490749 492716 D PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2261 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 490749..492716 Methylovorus glucosetrophus SIP3-4 8172599 YP_003050245.1 CDS Msip34_0470 NC_012969.1 492719 493666 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: mfa:Mfla_2260 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 492719..493666 Methylovorus glucosetrophus SIP3-4 8172600 YP_003050246.1 CDS Msip34_0471 NC_012969.1 493679 494902 D PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: mfa:Mfla_2259 metal dependent phosphohydrolase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 493679..494902 Methylovorus glucosetrophus SIP3-4 8172601 YP_003050247.1 CDS Msip34_0472 NC_012969.1 495219 495575 D PFAM: protein of unknown function DUF1555; hypothetical protein 495219..495575 Methylovorus glucosetrophus SIP3-4 8172602 YP_003050248.1 CDS slmA NC_012969.1 495671 496231 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(495671..496231) Methylovorus glucosetrophus SIP3-4 8172603 YP_003050249.1 CDS Msip34_0474 NC_012969.1 496313 496942 R TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_2256 pyrimidine 5-nucleotidase; pyrimidine 5'-nucleotidase complement(496313..496942) Methylovorus glucosetrophus SIP3-4 8172604 YP_003050250.1 CDS Msip34_0475 NC_012969.1 496958 497842 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(496958..497842) Methylovorus glucosetrophus SIP3-4 8172605 YP_003050251.1 CDS Msip34_0476 NC_012969.1 497934 499604 D PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mfa:Mfla_2254 formate-tetrahydrofolate ligase; formate--tetrahydrofolate ligase 497934..499604 Methylovorus glucosetrophus SIP3-4 8172606 YP_003050252.1 CDS Msip34_0477 NC_012969.1 499740 500165 R PFAM: heat shock protein Hsp20; KEGG: tbd:Tbd_2312 heat shock protein HSP20; heat shock protein Hsp20 complement(499740..500165) Methylovorus glucosetrophus SIP3-4 8172607 YP_003050253.1 CDS Msip34_0478 NC_012969.1 500281 501852 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(500281..501852) Methylovorus glucosetrophus SIP3-4 8172608 YP_003050254.1 CDS Msip34_0479 NC_012969.1 502004 503338 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rso:RS00399 manganese transport protein MntH; NRAMP family Mn2+/Fe2+ transporter 502004..503338 Methylovorus glucosetrophus SIP3-4 8172609 YP_003050255.1 CDS Msip34_0480 NC_012969.1 503335 504066 R PFAM: protein of unknown function DUF558; KEGG: mfa:Mfla_2251 hypothetical protein; hypothetical protein complement(503335..504066) Methylovorus glucosetrophus SIP3-4 8172610 YP_003050256.1 CDS Msip34_0481 NC_012969.1 504237 504788 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_2250 hypothetical protein; alkyl hydroperoxide reductase 504237..504788 Methylovorus glucosetrophus SIP3-4 8172611 YP_003050257.1 CDS Msip34_0482 NC_012969.1 504844 505839 D KEGG: rfr:Rfer_1673 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 504844..505839 Methylovorus glucosetrophus SIP3-4 8172612 YP_003050258.1 CDS Msip34_0483 NC_012969.1 506040 508025 D TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mfa:Mfla_2249 transketolase; transketolase 506040..508025 Methylovorus glucosetrophus SIP3-4 8172613 YP_003050259.1 CDS Msip34_0484 NC_012969.1 508100 509098 D TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: mfa:Mfla_2248 glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 508100..509098 Methylovorus glucosetrophus SIP3-4 8172614 YP_003050260.1 CDS pgk NC_012969.1 509109 510290 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 509109..510290 Methylovorus glucosetrophus SIP3-4 8172615 YP_003050261.1 CDS Msip34_0486 NC_012969.1 510420 511856 D KEGG: mfa:Mfla_2244 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 510420..511856 Methylovorus glucosetrophus SIP3-4 8172616 YP_003050262.1 CDS Msip34_0487 NC_012969.1 511866 512951 D KEGG: pst:PSPTO_0390 fructose-1,6-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 511866..512951 Methylovorus glucosetrophus SIP3-4 8172617 YP_003050263.1 CDS Msip34_0488 NC_012969.1 513105 513518 D PFAM: phosphate-starvation-inducible E; KEGG: tbd:Tbd_2600 hypothetical protein; phosphate-starvation-inducible E 513105..513518 Methylovorus glucosetrophus SIP3-4 8172618 YP_003050264.1 CDS Msip34_0489 NC_012969.1 513582 514481 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 513582..514481 Methylovorus glucosetrophus SIP3-4 8172619 YP_003050265.1 CDS Msip34_0490 NC_012969.1 514478 515395 D PFAM: carbonic anhydrase; protein of unknown function DUF1232; KEGG: glo:Glov_0555 carbonate dehydratase; carbonate dehydratase 514478..515395 Methylovorus glucosetrophus SIP3-4 8172620 YP_003050266.1 CDS Msip34_0491 NC_012969.1 515439 515966 D PFAM: Inorganic pyrophosphatase; KEGG: mfa:Mfla_2240 inorganic diphosphatase; inorganic diphosphatase 515439..515966 Methylovorus glucosetrophus SIP3-4 8172621 YP_003050267.1 CDS Msip34_0492 NC_012969.1 516047 516706 R TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mfa:Mfla_2594 uracil-DNA glycosylase; uracil-DNA glycosylase complement(516047..516706) Methylovorus glucosetrophus SIP3-4 8172622 YP_003050268.1 CDS Msip34_0493 NC_012969.1 516743 517555 R PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_2239 hypothetical protein; ABC-2 type transporter complement(516743..517555) Methylovorus glucosetrophus SIP3-4 8172623 YP_003050269.1 CDS Msip34_0494 NC_012969.1 517552 518304 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2238 ABC transporter related; ABC transporter-like protein complement(517552..518304) Methylovorus glucosetrophus SIP3-4 8172624 YP_003050270.1 CDS Msip34_0495 NC_012969.1 518318 519109 R PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_2237 hypothetical protein; hypothetical protein complement(518318..519109) Methylovorus glucosetrophus SIP3-4 8172062 YP_003050271.1 CDS Msip34_0496 NC_012969.1 519164 519586 R PFAM: protein of unknown function DUF721; KEGG: mfa:Mfla_2236 hypothetical protein; hypothetical protein complement(519164..519586) Methylovorus glucosetrophus SIP3-4 8172063 YP_003050272.1 CDS Msip34_0497 NC_012969.1 519614 520492 D PFAM: Peptidase M23; KEGG: mfa:Mfla_2235 peptidase M23B; peptidase M23 519614..520492 Methylovorus glucosetrophus SIP3-4 8172064 YP_003050273.1 CDS Msip34_0498 NC_012969.1 520604 523342 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: mfa:Mfla_2234 protein translocase subunit SecA; preprotein translocase subunit SecA 520604..523342 Methylovorus glucosetrophus SIP3-4 8172065 YP_003050274.1 CDS Msip34_0499 NC_012969.1 523420 524811 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mms:mma_0589 ammonium transporter; ammonium transporter 523420..524811 Methylovorus glucosetrophus SIP3-4 8172066 YP_003050275.1 CDS Msip34_0500 NC_012969.1 524811 525086 D KEGG: lch:Lcho_4374 hypothetical protein; hypothetical protein 524811..525086 Methylovorus glucosetrophus SIP3-4 8172067 YP_003050276.1 CDS Msip34_0501 NC_012969.1 525285 525488 D PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_7287 hypothetical protein; hypothetical protein 525285..525488 Methylovorus glucosetrophus SIP3-4 8172068 YP_003050277.1 CDS argJ NC_012969.1 525642 526868 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 525642..526868 Methylovorus glucosetrophus SIP3-4 8172069 YP_003050278.1 CDS Msip34_0503 NC_012969.1 526894 527790 D PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: mfa:Mfla_2231 hypothetical protein; hypothetical protein 526894..527790 Methylovorus glucosetrophus SIP3-4 8172070 YP_003050279.1 CDS Msip34_0504 NC_012969.1 527787 528737 D TIGRFAM: mutator MutT protein; PFAM: thiamine monophosphate synthase; NUDIX hydrolase; KEGG: mfa:Mfla_2230 hypothetical protein; hypothetical protein 527787..528737 Methylovorus glucosetrophus SIP3-4 8172071 YP_003050280.1 CDS Msip34_0505 NC_012969.1 528724 529161 D KEGG: mfa:Mfla_2229 hypothetical protein; hypothetical protein 528724..529161 Methylovorus glucosetrophus SIP3-4 8172072 YP_003050281.1 CDS Msip34_0506 NC_012969.1 529179 529622 R PFAM: protein of unknown function DUF461; KEGG: mpt:Mpe_A0691 hypothetical protein; hypothetical protein complement(529179..529622) Methylovorus glucosetrophus SIP3-4 8172073 YP_003050282.1 CDS Msip34_0507 NC_012969.1 529817 530575 R PFAM: protein of unknown function DUF1342; KEGG: mfa:Mfla_2227 hypothetical protein; hypothetical protein complement(529817..530575) Methylovorus glucosetrophus SIP3-4 8172074 YP_003050283.1 CDS Msip34_0508 NC_012969.1 530630 531238 R KEGG: mfa:Mfla_2226 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(530630..531238) Methylovorus glucosetrophus SIP3-4 8172075 YP_003050284.1 CDS Msip34_0509 NC_012969.1 531240 532115 R PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mfa:Mfla_2225 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; prepilin peptidase complement(531240..532115) Methylovorus glucosetrophus SIP3-4 8172076 YP_003050285.1 CDS Msip34_0510 NC_012969.1 532261 532581 D KEGG: mfa:Mfla_2224 hypothetical protein; hypothetical protein 532261..532581 Methylovorus glucosetrophus SIP3-4 8172077 YP_003050286.1 CDS Msip34_0511 NC_012969.1 532696 533664 R PFAM: Polyprenyl synthetase; KEGG: mfa:Mfla_2220 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase complement(532696..533664) Methylovorus glucosetrophus SIP3-4 8172078 YP_003050287.1 CDS Msip34_0512 NC_012969.1 533878 534192 D TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: mfa:Mfla_2219 50S ribosomal protein L21P; 50S ribosomal protein L21 533878..534192 Methylovorus glucosetrophus SIP3-4 8172079 YP_003050288.1 CDS rpmA NC_012969.1 534227 534484 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 534227..534484 Methylovorus glucosetrophus SIP3-4 8172080 YP_003050289.1 CDS obgE NC_012969.1 534611 535663 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 534611..535663 Methylovorus glucosetrophus SIP3-4 8172081 YP_003050290.1 CDS Msip34_0515 NC_012969.1 535644 536762 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 535644..536762 Methylovorus glucosetrophus SIP3-4 8172082 YP_003050291.1 CDS Msip34_0516 NC_012969.1 536774 537274 D KEGG: mfa:Mfla_2215 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 536774..537274 Methylovorus glucosetrophus SIP3-4 8172083 YP_003050292.1 CDS Msip34_0517 NC_012969.1 537271 538428 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase 537271..538428 Methylovorus glucosetrophus SIP3-4 8172084 YP_003050293.1 CDS rpsT NC_012969.1 538704 538967 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(538704..538967) Methylovorus glucosetrophus SIP3-4 8172085 YP_003050294.1 CDS Msip34_0519 NC_012969.1 539301 540839 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mfa:Mfla_2210 integral membrane protein MviN; integral membrane protein MviN 539301..540839 Methylovorus glucosetrophus SIP3-4 8172086 YP_003050295.1 CDS Msip34_0520 NC_012969.1 540839 541747 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: mfa:Mfla_2209 riboflavin kinase / FMN adenylyltransferase; riboflavin biosynthesis protein RibF 540839..541747 Methylovorus glucosetrophus SIP3-4 8172087 YP_003050296.1 CDS Msip34_0521 NC_012969.1 541821 544628 D TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mfa:Mfla_2208 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 541821..544628 Methylovorus glucosetrophus SIP3-4 8172088 YP_003050297.1 CDS lspA NC_012969.1 544621 545076 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 544621..545076 Methylovorus glucosetrophus SIP3-4 8172089 YP_003050298.1 CDS Msip34_0523 NC_012969.1 545129 545764 D PFAM: oxidoreductase molybdopterin binding; KEGG: azc:AZC_1525 oxidoreductase; molybdopterin-binding oxidoreductase 545129..545764 Methylovorus glucosetrophus SIP3-4 8172090 YP_003050299.1 CDS Msip34_0524 NC_012969.1 545740 546225 D KEGG: mfa:Mfla_0013 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 545740..546225 Methylovorus glucosetrophus SIP3-4 8172091 YP_003050300.1 CDS Msip34_0525 NC_012969.1 546279 547214 R PFAM: protein of unknown function DUF808; KEGG: tbd:Tbd_0220 hypothetical protein; hypothetical protein complement(546279..547214) Methylovorus glucosetrophus SIP3-4 8172092 YP_003050301.1 CDS Msip34_0526 NC_012969.1 547323 548381 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mfa:Mfla_2206 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(547323..548381) Methylovorus glucosetrophus SIP3-4 8172093 YP_003050302.1 CDS Msip34_0527 NC_012969.1 548511 548849 D hypothetical protein 548511..548849 Methylovorus glucosetrophus SIP3-4 8172094 YP_003050303.1 CDS Msip34_0528 NC_012969.1 548846 549508 D hypothetical protein 548846..549508 Methylovorus glucosetrophus SIP3-4 8172095 YP_003050304.1 CDS Msip34_0529 NC_012969.1 549606 551072 R PFAM: Catalase domain protein; KEGG: amc:MADE_00522 catalase; catalase complement(549606..551072) Methylovorus glucosetrophus SIP3-4 8172096 YP_003050305.1 CDS Msip34_0530 NC_012969.1 551304 551414 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bxe:Bxe_A4150 hypothetical protein; cyd operon protein YbgT complement(551304..551414) Methylovorus glucosetrophus SIP3-4 8172097 YP_003050306.1 CDS Msip34_0531 NC_012969.1 551427 552575 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bgl:bglu_1g31480 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(551427..552575) Methylovorus glucosetrophus SIP3-4 8172098 YP_003050307.1 CDS Msip34_0532 NC_012969.1 552585 554153 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bcj:BCAL0785 cytochrome d ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(552585..554153) Methylovorus glucosetrophus SIP3-4 8172099 YP_003050308.1 CDS Msip34_0533 NC_012969.1 554164 554367 R hypothetical protein complement(554164..554367) Methylovorus glucosetrophus SIP3-4 8172100 YP_003050309.1 CDS Msip34_0534 NC_012969.1 554495 555040 R PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: mfa:Mfla_2202 response regulator receiver domain-containing protein; two component Fis family transcriptional regulator complement(554495..555040) Methylovorus glucosetrophus SIP3-4 8172101 YP_003050310.1 CDS Msip34_0535 NC_012969.1 555033 556415 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2201 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(555033..556415) Methylovorus glucosetrophus SIP3-4 8172102 YP_003050311.1 CDS Msip34_0536 NC_012969.1 556556 558835 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: har:HEAR0058 putative TonB-dependent receptor protein; TonB-dependent receptor 556556..558835 Methylovorus glucosetrophus SIP3-4 8172103 YP_003050312.1 CDS Msip34_0537 NC_012969.1 558848 560110 D KEGG: rso:RS05315 putative signal peptide protein; putative signal peptide protein 558848..560110 Methylovorus glucosetrophus SIP3-4 8172104 YP_003050313.1 CDS Msip34_0538 NC_012969.1 560107 560637 D KEGG: neu:NE1529 signal peptide protein; signal peptide protein 560107..560637 Methylovorus glucosetrophus SIP3-4 8172105 YP_003050314.1 CDS Msip34_0539 NC_012969.1 560877 562994 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_2653 TonB-dependent receptor; TonB-dependent receptor 560877..562994 Methylovorus glucosetrophus SIP3-4 8172106 YP_003050315.1 CDS Msip34_0540 NC_012969.1 563125 564399 R KEGG: pmy:Pmen_0570 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(563125..564399) Methylovorus glucosetrophus SIP3-4 8172107 YP_003050316.1 CDS Msip34_0541 NC_012969.1 564396 567350 R KEGG: pap:PSPA7_0717 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(564396..567350) Methylovorus glucosetrophus SIP3-4 8172108 YP_003050317.1 CDS Msip34_0542 NC_012969.1 567651 570236 D KEGG: mfa:Mfla_2198 ATPase AAA-2; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 567651..570236 Methylovorus glucosetrophus SIP3-4 8172109 YP_003050318.1 CDS Msip34_0543 NC_012969.1 570342 571190 R PFAM: NmrA family protein; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pna:Pnap_0622 NmrA family protein; NmrA family protein complement(570342..571190) Methylovorus glucosetrophus SIP3-4 8172110 YP_003050319.1 CDS Msip34_0544 NC_012969.1 571283 571678 D PFAM: helix-turn-helix HxlR type; KEGG: pna:Pnap_0621 HxlR family transcriptional regulator; HxlR family transcriptional regulator 571283..571678 Methylovorus glucosetrophus SIP3-4 8172111 YP_003050320.1 CDS Msip34_0545 NC_012969.1 571836 572798 D PFAM: Lytic transglycosylase catalytic; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rfr:Rfer_3765 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 571836..572798 Methylovorus glucosetrophus SIP3-4 8172112 YP_003050321.1 CDS Msip34_0546 NC_012969.1 572898 573410 D KEGG: mfa:Mfla_2197 hypothetical protein; hypothetical protein 572898..573410 Methylovorus glucosetrophus SIP3-4 8172113 YP_003050322.1 CDS Msip34_0547 NC_012969.1 573508 573927 D PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2190 hypothetical protein; hypothetical protein 573508..573927 Methylovorus glucosetrophus SIP3-4 8172114 YP_003050323.1 CDS Msip34_0548 NC_012969.1 573927 575117 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rpe:RPE_1228 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 573927..575117 Methylovorus glucosetrophus SIP3-4 8172115 YP_003050324.1 CDS Msip34_0549 NC_012969.1 575174 576385 D PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2734 glycosyl transferase, group 1; group 1 glycosyl transferase 575174..576385 Methylovorus glucosetrophus SIP3-4 8172116 YP_003050325.1 CDS Msip34_0550 NC_012969.1 576415 577680 R PFAM: Peptidase M23; KEGG: mfa:Mfla_2189 peptidase M23B; peptidase M23 complement(576415..577680) Methylovorus glucosetrophus SIP3-4 8172117 YP_003050326.1 CDS Msip34_0551 NC_012969.1 577673 579229 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(577673..579229) Methylovorus glucosetrophus SIP3-4 8172118 YP_003050327.1 CDS Msip34_0552 NC_012969.1 579448 579852 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2187 rhodanese-like protein; rhodanese domain-containing protein 579448..579852 Methylovorus glucosetrophus SIP3-4 8172119 YP_003050328.1 CDS Msip34_0553 NC_012969.1 579856 580119 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: pne:Pnec_1651 glutaredoxin 3; glutaredoxin 3 579856..580119 Methylovorus glucosetrophus SIP3-4 8172120 YP_003050329.1 CDS Msip34_0554 NC_012969.1 580219 580701 D TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mfa:Mfla_2185 protein translocase subunit SecB; protein-export protein SecB 580219..580701 Methylovorus glucosetrophus SIP3-4 8172121 YP_003050330.1 CDS Msip34_0555 NC_012969.1 580682 581137 D PFAM: protein of unknown function DUF1058; KEGG: mfa:Mfla_2184 hypothetical protein; hypothetical protein 580682..581137 Methylovorus glucosetrophus SIP3-4 8172122 YP_003050331.1 CDS Msip34_0556 NC_012969.1 581137 582126 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_2183 glycerol-3-phosphate dehydrogenase (NAD(P)+); glycerol-3-phosphate dehydrogenase 581137..582126 Methylovorus glucosetrophus SIP3-4 8172123 YP_003050332.1 CDS Msip34_0557 NC_012969.1 582221 582715 R TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_2182 RNA methyltransferase TrmH, group 2; TrmH family RNA methyltransferase complement(582221..582715) Methylovorus glucosetrophus SIP3-4 8172124 YP_003050333.1 CDS Msip34_0558 NC_012969.1 582880 583281 D hypothetical protein 582880..583281 Methylovorus glucosetrophus SIP3-4 8172125 YP_003050334.1 CDS Msip34_0559 NC_012969.1 583445 583687 D hypothetical protein 583445..583687 Methylovorus glucosetrophus SIP3-4 8172126 YP_003050335.1 CDS Msip34_0560 NC_012969.1 583804 584523 D PFAM: carbonic anhydrase; KEGG: mfa:Mfla_0800 carbonic anhydrase; carbonic anhydrase 583804..584523 Methylovorus glucosetrophus SIP3-4 8172127 YP_003050336.1 CDS Msip34_0561 NC_012969.1 584510 586048 D PFAM: sulphate transporter; Xanthine/uracil/vitamin C permease; KEGG: mfa:Mfla_0799 sulphate transporter; sulfate transporter 584510..586048 Methylovorus glucosetrophus SIP3-4 8172128 YP_003050337.1 CDS Msip34_0562 NC_012969.1 586121 586804 R KEGG: mfa:Mfla_2181 hypothetical protein; hypothetical protein complement(586121..586804) Methylovorus glucosetrophus SIP3-4 8172129 YP_003050338.1 CDS Msip34_0563 NC_012969.1 586871 587272 D KEGG: mfa:Mfla_2165 hypothetical protein; hypothetical protein 586871..587272 Methylovorus glucosetrophus SIP3-4 8172130 YP_003050339.1 CDS Msip34_0564 NC_012969.1 587265 588257 D KEGG: mfa:Mfla_2164 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 587265..588257 Methylovorus glucosetrophus SIP3-4 8172131 YP_003050340.1 CDS Msip34_0565 NC_012969.1 588260 589432 D KEGG: mfa:Mfla_2163 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; 8-amino-7-oxononanoate synthase 588260..589432 Methylovorus glucosetrophus SIP3-4 8172132 YP_003050341.1 CDS Msip34_0566 NC_012969.1 589429 590262 D TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: mfa:Mfla_2162 BioH protein; bioH protein 589429..590262 Methylovorus glucosetrophus SIP3-4 8172133 YP_003050342.1 CDS Msip34_0567 NC_012969.1 590259 591149 D TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: mfa:Mfla_2161 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 590259..591149 Methylovorus glucosetrophus SIP3-4 8172134 YP_003050343.1 CDS Msip34_0568 NC_012969.1 591167 591895 D TIGRFAM: dethiobiotin synthase; KEGG: mfa:Mfla_2160 dethiobiotin synthase; dethiobiotin synthase 591167..591895 Methylovorus glucosetrophus SIP3-4 8172135 YP_003050344.1 CDS Msip34_0569 NC_012969.1 591944 592264 R hypothetical protein complement(591944..592264) Methylovorus glucosetrophus SIP3-4 8172136 YP_003050345.1 CDS Msip34_0570 NC_012969.1 592322 592984 R KEGG: mfa:Mfla_2159 nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(592322..592984) Methylovorus glucosetrophus SIP3-4 8172137 YP_003050346.1 CDS proA NC_012969.1 593015 594271 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(593015..594271) Methylovorus glucosetrophus SIP3-4 8172138 YP_003050347.1 CDS Msip34_0572 NC_012969.1 594305 595333 R KEGG: mfa:Mfla_2157 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta complement(594305..595333) Methylovorus glucosetrophus SIP3-4 8172139 YP_003050348.1 CDS Msip34_0573 NC_012969.1 595333 595872 R PFAM: Rare lipoprotein B; KEGG: mfa:Mfla_2156 rare lipoprotein B; Rare lipoprotein B complement(595333..595872) Methylovorus glucosetrophus SIP3-4 8172140 YP_003050349.1 CDS Msip34_0574 NC_012969.1 595876 598356 R TIGRFAM: leucyl-tRNA synthetase; KEGG: mfa:Mfla_2155 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(595876..598356) Methylovorus glucosetrophus SIP3-4 8172141 YP_003050350.1 CDS Msip34_0575 NC_012969.1 598515 599168 R TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: mms:mma_2576 adenylate kinase; adenylate kinase complement(598515..599168) Methylovorus glucosetrophus SIP3-4 8173766 YP_003050351.1 CDS Msip34_0576 NC_012969.1 599217 599981 R KEGG: mfa:Mfla_2152 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase complement(599217..599981) Methylovorus glucosetrophus SIP3-4 8172464 YP_003050352.1 CDS Msip34_0577 NC_012969.1 599978 600976 R KEGG: mfa:Mfla_2151 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(599978..600976) Methylovorus glucosetrophus SIP3-4 8172465 YP_003050353.1 CDS Msip34_0578 NC_012969.1 600980 602296 R PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_2150 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein complement(600980..602296) Methylovorus glucosetrophus SIP3-4 8172466 YP_003050354.1 CDS Msip34_0579 NC_012969.1 602298 604844 R PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: mfa:Mfla_2149 organic solvent tolerance protein; organic solvent tolerance protein complement(602298..604844) Methylovorus glucosetrophus SIP3-4 8172467 YP_003050355.1 CDS Msip34_0580 NC_012969.1 604920 605948 D PFAM: aminoglycoside phosphotransferase; KEGG: mfa:Mfla_2148 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 604920..605948 Methylovorus glucosetrophus SIP3-4 8172468 YP_003050356.1 CDS Msip34_0581 NC_012969.1 605948 606634 D PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_2147 nucleotidyl transferase; nucleotidyl transferase 605948..606634 Methylovorus glucosetrophus SIP3-4 8172469 YP_003050357.1 CDS Msip34_0582 NC_012969.1 606644 607948 D PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: mfa:Mfla_2146 aminopeptidase P; peptidase M24 606644..607948 Methylovorus glucosetrophus SIP3-4 8172470 YP_003050358.1 CDS Msip34_0583 NC_012969.1 607945 609117 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mfa:Mfla_2145 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 607945..609117 Methylovorus glucosetrophus SIP3-4 8172471 YP_003050359.1 CDS Msip34_0584 NC_012969.1 609114 610274 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mfa:Mfla_2144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 609114..610274 Methylovorus glucosetrophus SIP3-4 8172472 YP_003050360.1 CDS Msip34_0585 NC_012969.1 610297 611019 D KEGG: mfa:Mfla_2143 putative thiol:disulphide interchange protein; putative thiol:disulfide interchange protein 610297..611019 Methylovorus glucosetrophus SIP3-4 8172473 YP_003050361.1 CDS Msip34_0586 NC_012969.1 611123 612334 R PFAM: type II secretion system protein; KEGG: mfa:Mfla_2142 type II secretion system protein; type II secretion system protein complement(611123..612334) Methylovorus glucosetrophus SIP3-4 8172474 YP_003050362.1 CDS Msip34_0587 NC_012969.1 612367 614088 R TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_2141 type II secretion system protein E; type IV-A pilus assembly ATPase PilB complement(612367..614088) Methylovorus glucosetrophus SIP3-4 8172475 YP_003050363.1 CDS Msip34_0588 NC_012969.1 614506 614709 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mfa:Mfla_2140 cold-shock DNA-binding protein family protein; cold-shock DNA-binding domain-containing protein 614506..614709 Methylovorus glucosetrophus SIP3-4 8172476 YP_003050364.1 CDS Msip34_0589 NC_012969.1 614825 616063 R PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: mfa:Mfla_2139 isocitrate dehydrogenase (NADP); isocitrate dehydrogenase complement(614825..616063) Methylovorus glucosetrophus SIP3-4 8172477 YP_003050365.1 CDS Msip34_0590 NC_012969.1 616086 616622 D PFAM: pseudouridine synthase; KEGG: mfa:Mfla_2138 ribosomal large subunit pseudouridine synthase E; pseudouridine synthase 616086..616622 Methylovorus glucosetrophus SIP3-4 8172478 YP_003050366.1 CDS Msip34_0591 NC_012969.1 616711 617418 D PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0585 hypothetical protein; glutamine amidotransferase 616711..617418 Methylovorus glucosetrophus SIP3-4 8172479 YP_003050367.1 CDS Msip34_0592 NC_012969.1 617488 618573 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 617488..618573 Methylovorus glucosetrophus SIP3-4 8172480 YP_003050368.1 CDS Msip34_0593 NC_012969.1 618605 619750 D PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: mfa:Mfla_2136 major facilitator transporter; major facilitator superfamily protein 618605..619750 Methylovorus glucosetrophus SIP3-4 8172481 YP_003050369.1 CDS Msip34_0594 NC_012969.1 619773 620417 D KEGG: mfa:Mfla_2135 hypothetical protein; hypothetical protein 619773..620417 Methylovorus glucosetrophus SIP3-4 8172482 YP_003050370.1 CDS Msip34_0595 NC_012969.1 620509 621315 R PFAM: protein of unknown function DUF198; KEGG: mfa:Mfla_2134 GTP cyclohydrolase; hypothetical protein complement(620509..621315) Methylovorus glucosetrophus SIP3-4 8172483 YP_003050371.1 CDS Msip34_0596 NC_012969.1 621367 623208 R TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mfa:Mfla_2133 1-deoxy-D-xylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase complement(621367..623208) Methylovorus glucosetrophus SIP3-4 8172484 YP_003050372.1 CDS Msip34_0597 NC_012969.1 623210 624097 R PFAM: Polyprenyl synthetase; KEGG: mfa:Mfla_2132 farnesyl-diphosphate synthase; polyprenyl synthetase complement(623210..624097) Methylovorus glucosetrophus SIP3-4 8172485 YP_003050373.1 CDS Msip34_0598 NC_012969.1 624097 624330 R TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: mfa:Mfla_2131 exodeoxyribonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(624097..624330) Methylovorus glucosetrophus SIP3-4 8172486 YP_003050374.1 CDS Msip34_0599 NC_012969.1 624497 625900 D KEGG: tbd:Tbd_0552 hypothetical protein; hypothetical protein 624497..625900 Methylovorus glucosetrophus SIP3-4 8172487 YP_003050375.1 CDS Msip34_0600 NC_012969.1 625966 626616 R PFAM: phospholipase/Carboxylesterase; KEGG: mfa:Mfla_2130 carboxylesterase; carboxylesterase complement(625966..626616) Methylovorus glucosetrophus SIP3-4 8172488 YP_003050376.1 CDS Msip34_0601 NC_012969.1 626766 627530 D PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_2128 beta-lactamase-like protein; beta-lactamase domain-containing protein 626766..627530 Methylovorus glucosetrophus SIP3-4 8172489 YP_003050377.1 CDS Msip34_0602 NC_012969.1 627584 628003 R PFAM: Fimbrial protein pilin; KEGG: aci:ACIAD3338 competence factor involved in DNA binding and uptake; Fimbrial protein pilin complement(627584..628003) Methylovorus glucosetrophus SIP3-4 8172490 YP_003050378.1 CDS Msip34_0603 NC_012969.1 628199 628720 R KEGG: mfa:Mfla_2125 MxaD gene product; MxaD complement(628199..628720) Methylovorus glucosetrophus SIP3-4 8172491 YP_003050379.1 CDS Msip34_0604 NC_012969.1 628783 629829 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mfa:Mfla_2124 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(628783..629829) Methylovorus glucosetrophus SIP3-4 8172492 YP_003050380.1 CDS Msip34_0605 NC_012969.1 629982 630503 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 629982..630503 Methylovorus glucosetrophus SIP3-4 8172493 YP_003050381.1 CDS psd NC_012969.1 630530 631471 R catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase complement(630530..631471) Methylovorus glucosetrophus SIP3-4 8172494 YP_003050382.1 CDS Msip34_0607 NC_012969.1 631529 632545 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(631529..632545) Methylovorus glucosetrophus SIP3-4 8172495 YP_003050383.1 CDS ilvH NC_012969.1 632653 633144 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(632653..633144) Methylovorus glucosetrophus SIP3-4 8172496 YP_003050384.1 CDS Msip34_0609 NC_012969.1 633158 634915 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: mfa:Mfla_2119 acetolactate synthase, large subunit; acetolactate synthase large subunit complement(633158..634915) Methylovorus glucosetrophus SIP3-4 8172497 YP_003050385.1 CDS Msip34_0610 NC_012969.1 635054 636835 R PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_2118 type II secretion system protein E; type II secretion system protein E complement(635054..636835) Methylovorus glucosetrophus SIP3-4 8172498 YP_003050386.1 CDS Msip34_0611 NC_012969.1 637010 637873 R KEGG: reu:Reut_A2736 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(637010..637873) Methylovorus glucosetrophus SIP3-4 8172499 YP_003050387.1 CDS Msip34_0612 NC_012969.1 637926 638537 D PFAM: Glutathione S-transferase domain; KEGG: mfa:Mfla_2116 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 637926..638537 Methylovorus glucosetrophus SIP3-4 8172500 YP_003050388.1 CDS Msip34_0613 NC_012969.1 638537 638701 D hypothetical protein 638537..638701 Methylovorus glucosetrophus SIP3-4 8172501 YP_003050389.1 CDS Msip34_0614 NC_012969.1 638685 639770 R TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: mfa:Mfla_2115 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(638685..639770) Methylovorus glucosetrophus SIP3-4 8172502 YP_003050390.1 CDS Msip34_0615 NC_012969.1 639767 640225 R PFAM: NUDIX hydrolase; KEGG: mfa:Mfla_2114 NUDIX hydrolase; NUDIX hydrolase complement(639767..640225) Methylovorus glucosetrophus SIP3-4 8172503 YP_003050391.1 CDS Msip34_0616 NC_012969.1 640270 640905 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: afr:AFE_0054 integral membrane protein, MarC family; multiple antibiotic resistance (MarC)-like protein complement(640270..640905) Methylovorus glucosetrophus SIP3-4 8172504 YP_003050392.1 CDS Msip34_0617 NC_012969.1 641002 641550 D TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: tgr:Tgr7_3290 DJ-1 family protein; DJ-1 family protein 641002..641550 Methylovorus glucosetrophus SIP3-4 8172505 YP_003050393.1 CDS Msip34_0618 NC_012969.1 641547 642137 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mfa:Mfla_2113 maf protein; maf protein 641547..642137 Methylovorus glucosetrophus SIP3-4 8172506 YP_003050394.1 CDS Msip34_0619 NC_012969.1 642169 643626 D KEGG: mfa:Mfla_2112 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Rne/Rng family ribonuclease 642169..643626 Methylovorus glucosetrophus SIP3-4 8172507 YP_003050395.1 CDS Msip34_0620 NC_012969.1 643752 644327 R PFAM: protein of unknown function YGGT; KEGG: mfa:Mfla_2110 protein of unknown function YGGT; hypothetical protein complement(643752..644327) Methylovorus glucosetrophus SIP3-4 8172508 YP_003050396.1 CDS Msip34_0621 NC_012969.1 644329 645141 R KEGG: mfa:Mfla_2109 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase complement(644329..645141) Methylovorus glucosetrophus SIP3-4 8172509 YP_003050397.1 CDS Msip34_0622 NC_012969.1 645219 645920 R PFAM: alanine racemase domain protein; KEGG: mfa:Mfla_2108 hypothetical protein; alanine racemase domain-containing protein complement(645219..645920) Methylovorus glucosetrophus SIP3-4 8172510 YP_003050398.1 CDS Msip34_0623 NC_012969.1 645963 647006 D KEGG: mfa:Mfla_2107 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 645963..647006 Methylovorus glucosetrophus SIP3-4 8172511 YP_003050399.1 CDS Msip34_0624 NC_012969.1 647055 648191 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_2106 twitching motility protein; twitching motility protein 647055..648191 Methylovorus glucosetrophus SIP3-4 8172512 YP_003050400.1 CDS Msip34_0625 NC_012969.1 648267 649235 D PFAM: protein of unknown function DUF72; KEGG: pfo:Pfl01_5035 hypothetical protein; hypothetical protein 648267..649235 Methylovorus glucosetrophus SIP3-4 8172513 YP_003050401.1 CDS Msip34_0626 NC_012969.1 649295 650572 R TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: mfa:Mfla_2103 dihydroorotase; dihydroorotase, multifunctional complex type complement(649295..650572) Methylovorus glucosetrophus SIP3-4 8172514 YP_003050402.1 CDS pyrB NC_012969.1 650569 651522 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(650569..651522) Methylovorus glucosetrophus SIP3-4 8172515 YP_003050403.1 CDS Msip34_0628 NC_012969.1 651522 652019 R PFAM: phosphoribosyltransferase; KEGG: mfa:Mfla_2101 phosphoribosyltransferase; uracil phosphoribosyltransferase complement(651522..652019) Methylovorus glucosetrophus SIP3-4 8172516 YP_003050404.1 CDS Msip34_0629 NC_012969.1 652043 652561 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(652043..652561) Methylovorus glucosetrophus SIP3-4 8172517 YP_003050405.1 CDS Msip34_0630 NC_012969.1 652594 653154 R PFAM: protein of unknown function DUF179; KEGG: nmu:Nmul_A2478 hypothetical protein; hypothetical protein complement(652594..653154) Methylovorus glucosetrophus SIP3-4 8172518 YP_003050406.1 CDS Msip34_0631 NC_012969.1 653177 654268 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mfa:Mfla_2098 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(653177..654268) Methylovorus glucosetrophus SIP3-4 8172519 YP_003050407.1 CDS Msip34_0632 NC_012969.1 654265 654870 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(654265..654870) Methylovorus glucosetrophus SIP3-4 8172520 YP_003050408.1 CDS Msip34_0633 NC_012969.1 655017 656285 D TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_2095 LolC/E family lipoprotein releasing system, transmembrane protein; LolC/E family lipoprotein releasing system transmembrane protein 655017..656285 Methylovorus glucosetrophus SIP3-4 8172521 YP_003050409.1 CDS Msip34_0634 NC_012969.1 656278 656982 D KEGG: mfa:Mfla_2094 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system ATP-binding protein 656278..656982 Methylovorus glucosetrophus SIP3-4 8172522 YP_003050410.1 CDS Msip34_0635 NC_012969.1 656995 659376 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: mfa:Mfla_2093 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-like competence protein ComEC/Rec2 656995..659376 Methylovorus glucosetrophus SIP3-4 8172523 YP_003050411.1 CDS Msip34_0636 NC_012969.1 659570 660655 D PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: dds:Ddes_0156 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 659570..660655 Methylovorus glucosetrophus SIP3-4 8172524 YP_003050412.1 CDS Msip34_0637 NC_012969.1 660822 661427 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_2092 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 660822..661427 Methylovorus glucosetrophus SIP3-4 8172525 YP_003050413.1 CDS Msip34_0638 NC_012969.1 661441 661863 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_2091 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 661441..661863 Methylovorus glucosetrophus SIP3-4 8172526 YP_003050414.1 CDS Msip34_0639 NC_012969.1 661954 663708 D KEGG: mfa:Mfla_2090 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 661954..663708 Methylovorus glucosetrophus SIP3-4 8172527 YP_003050415.1 CDS lpxK NC_012969.1 663739 664734 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 663739..664734 Methylovorus glucosetrophus SIP3-4 8172528 YP_003050416.1 CDS Msip34_0641 NC_012969.1 664736 664915 D PFAM: protein of unknown function DUF343; KEGG: mfa:Mfla_2088 hypothetical protein; hypothetical protein 664736..664915 Methylovorus glucosetrophus SIP3-4 8172529 YP_003050417.1 CDS Msip34_0642 NC_012969.1 664918 665682 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 664918..665682 Methylovorus glucosetrophus SIP3-4 8172530 YP_003050418.1 CDS Msip34_0643 NC_012969.1 671663 673717 R KEGG: mfa:Mfla_1189 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(671663..673717) Methylovorus glucosetrophus SIP3-4 8172537 YP_003050419.1 CDS Msip34_0644 NC_012969.1 673909 674133 D hypothetical protein 673909..674133 Methylovorus glucosetrophus SIP3-4 8172538 YP_003050420.1 CDS Msip34_0645 NC_012969.1 674094 674915 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2086 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(674094..674915) Methylovorus glucosetrophus SIP3-4 8172539 YP_003050421.1 CDS Msip34_0646 NC_012969.1 675058 675600 D KEGG: mfa:Mfla_2085 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 675058..675600 Methylovorus glucosetrophus SIP3-4 8172540 YP_003050422.1 CDS Msip34_0647 NC_012969.1 675626 676705 R TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: eba:ebA4496 magnesium Mg(2+)/cobalt Co(2+) transport protein; magnesium and cobalt transport protein CorA complement(675626..676705) Methylovorus glucosetrophus SIP3-4 8172541 YP_003050423.1 CDS Msip34_0648 NC_012969.1 676705 677637 R TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dar:Daro_4128 cysteine synthase; cysteine synthase A complement(676705..677637) Methylovorus glucosetrophus SIP3-4 8172542 YP_003050424.1 CDS Msip34_0649 NC_012969.1 677836 679848 D KEGG: mms:mma_2167 FimV type IV pilus assembly protein; Tfp pilus assembly protein FimV-like protein 677836..679848 Methylovorus glucosetrophus SIP3-4 8172543 YP_003050425.1 CDS Msip34_0650 NC_012969.1 679896 680468 R PFAM: flavin reductase domain protein FMN-binding; KEGG: mfa:Mfla_2083 flavin reductase-like, FMN-binding; flavin reductase domain-containing protein complement(679896..680468) Methylovorus glucosetrophus SIP3-4 8172788 YP_003050426.1 CDS Msip34_0651 NC_012969.1 680499 682265 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(680499..682265) Methylovorus glucosetrophus SIP3-4 8172789 YP_003050427.1 CDS Msip34_0652 NC_012969.1 682353 683333 D KEGG: mfa:Mfla_2081 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 682353..683333 Methylovorus glucosetrophus SIP3-4 8172790 YP_003050428.1 CDS Msip34_0653 NC_012969.1 683330 684100 D TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: mfa:Mfla_2080 putative transcriptional acitvator, Baf; putative Baf family transcriptional acitvator 683330..684100 Methylovorus glucosetrophus SIP3-4 8172791 YP_003050429.1 CDS Msip34_0654 NC_012969.1 684097 684747 D PFAM: Sporulation domain protein; KEGG: mfa:Mfla_2079 hypothetical protein; sporulation domain-containing protein 684097..684747 Methylovorus glucosetrophus SIP3-4 8172792 YP_003050430.1 CDS Msip34_0655 NC_012969.1 684756 685175 D KEGG: xac:XAC2358 DnaK supressor; DnaK supressor 684756..685175 Methylovorus glucosetrophus SIP3-4 8172793 YP_003050431.1 CDS Msip34_0656 NC_012969.1 685380 685877 R KEGG: xcv:XCV3258 putative secreted protein; putative secreted protein complement(685380..685877) Methylovorus glucosetrophus SIP3-4 8172794 YP_003050432.1 CDS Msip34_0657 NC_012969.1 685970 687748 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; biotin/lipoyl attachment domain-containing protein; KEGG: mfa:Mfla_2076 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(685970..687748) Methylovorus glucosetrophus SIP3-4 8172795 YP_003050433.1 CDS Msip34_0658 NC_012969.1 687758 689083 R KEGG: mfa:Mfla_2075 dehydrogenase catalytic domain-containing protein; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(687758..689083) Methylovorus glucosetrophus SIP3-4 8172796 YP_003050434.1 CDS aceE NC_012969.1 689103 691757 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(689103..691757) Methylovorus glucosetrophus SIP3-4 8172797 YP_003050435.1 CDS Msip34_0660 NC_012969.1 692002 693465 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mfa:Mfla_2073 leucyl aminopeptidase; leucyl aminopeptidase 692002..693465 Methylovorus glucosetrophus SIP3-4 8172798 YP_003050436.1 CDS Msip34_0661 NC_012969.1 693506 694177 D PFAM: regulatory protein Crp; SMART: regulatory protein Crp; KEGG: tgr:Tgr7_1360 putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator 693506..694177 Methylovorus glucosetrophus SIP3-4 8172799 YP_003050437.1 CDS Msip34_0662 NC_012969.1 694187 695893 R PFAM: TrkA-N domain protein; KEGG: mfa:Mfla_2071 TrkA-N; TrkA-N domain-containing protein complement(694187..695893) Methylovorus glucosetrophus SIP3-4 8172800 YP_003050438.1 CDS Msip34_0663 NC_012969.1 695922 696296 R KEGG: aeh:Mlg_2527 hypothetical protein; hypothetical protein complement(695922..696296) Methylovorus glucosetrophus SIP3-4 8172801 YP_003050439.1 CDS Msip34_0664 NC_012969.1 696372 697358 R PFAM: adenylate cyclase; KEGG: mfa:Mfla_2069 adenylate cyclase; adenylate cyclase complement(696372..697358) Methylovorus glucosetrophus SIP3-4 8172802 YP_003050440.1 CDS Msip34_0665 NC_012969.1 697351 697983 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2068 putative partition-related protein; Cobyrinic acid ac-diamide synthase complement(697351..697983) Methylovorus glucosetrophus SIP3-4 8172803 YP_003050441.1 CDS Msip34_0666 NC_012969.1 698151 698615 R PFAM: Phosphoglycerate mutase; KEGG: mfa:Mfla_2067 phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA complement(698151..698615) Methylovorus glucosetrophus SIP3-4 8172804 YP_003050442.1 CDS Msip34_0667 NC_012969.1 698723 699649 D KEGG: mfa:Mfla_2066 hypothetical protein; hypothetical protein 698723..699649 Methylovorus glucosetrophus SIP3-4 8172805 YP_003050443.1 CDS Msip34_0668 NC_012969.1 699642 701348 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mfa:Mfla_2065 exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 699642..701348 Methylovorus glucosetrophus SIP3-4 8172806 YP_003050444.1 CDS Msip34_0669 NC_012969.1 701398 702153 D TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: mfa:Mfla_2064 triosephosphate isomerase; triosephosphate isomerase 701398..702153 Methylovorus glucosetrophus SIP3-4 8172807 YP_003050445.1 CDS secG NC_012969.1 702204 702554 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mfa:Mfla_2063 preprotein translocase subunit SecG; preprotein translocase subunit SecG 702204..702554 Methylovorus glucosetrophus SIP3-4 8172808 YP_003050446.1 CDS Msip34_0671 NC_012969.1 702724 703080 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mfa:Mfla_2061 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 702724..703080 Methylovorus glucosetrophus SIP3-4 8172810 YP_003050447.1 CDS Msip34_0672 NC_012969.1 703214 703690 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 703214..703690 Methylovorus glucosetrophus SIP3-4 8172811 YP_003050448.1 CDS Msip34_0673 NC_012969.1 703695 704291 D KEGG: mfa:Mfla_2059 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 703695..704291 Methylovorus glucosetrophus SIP3-4 8172812 YP_003050449.1 CDS Msip34_0674 NC_012969.1 704284 705537 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 704284..705537 Methylovorus glucosetrophus SIP3-4 8172813 YP_003050450.1 CDS Msip34_0675 NC_012969.1 705537 706010 D TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mfa:Mfla_2057 NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E 705537..706010 Methylovorus glucosetrophus SIP3-4 8172814 YP_003050451.1 CDS Msip34_0676 NC_012969.1 706010 707329 D KEGG: mfa:Mfla_2056 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 706010..707329 Methylovorus glucosetrophus SIP3-4 8172815 YP_003050452.1 CDS Msip34_0677 NC_012969.1 707448 709832 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 707448..709832 Methylovorus glucosetrophus SIP3-4 8172816 YP_003050453.1 CDS Msip34_0678 NC_012969.1 709829 710860 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: mfa:Mfla_2054 respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 709829..710860 Methylovorus glucosetrophus SIP3-4 8172817 YP_003050454.1 CDS Msip34_0679 NC_012969.1 710868 711359 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 710868..711359 Methylovorus glucosetrophus SIP3-4 8172818 YP_003050455.1 CDS Msip34_0680 NC_012969.1 711430 712071 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mfa:Mfla_2052 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 711430..712071 Methylovorus glucosetrophus SIP3-4 8172819 YP_003050456.1 CDS Msip34_0681 NC_012969.1 712071 712376 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mfa:Mfla_2051 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 712071..712376 Methylovorus glucosetrophus SIP3-4 8172820 YP_003050457.1 CDS Msip34_0682 NC_012969.1 712391 714427 D KEGG: mfa:Mfla_2050 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 712391..714427 Methylovorus glucosetrophus SIP3-4 8172821 YP_003050458.1 CDS Msip34_0683 NC_012969.1 714431 715909 D KEGG: mfa:Mfla_2049 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 714431..715909 Methylovorus glucosetrophus SIP3-4 8172822 YP_003050459.1 CDS Msip34_0684 NC_012969.1 715939 717390 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mfa:Mfla_2048 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 715939..717390 Methylovorus glucosetrophus SIP3-4 8172823 YP_003050460.1 CDS Msip34_0685 NC_012969.1 717400 717696 D KEGG: mfa:Mfla_2047 hypothetical protein; hypothetical protein 717400..717696 Methylovorus glucosetrophus SIP3-4 8172824 YP_003050461.1 CDS Msip34_0686 NC_012969.1 717914 718651 R hypothetical protein complement(717914..718651) Methylovorus glucosetrophus SIP3-4 8172826 YP_003050462.1 CDS Msip34_0687 NC_012969.1 718813 719388 D PFAM: NUDIX hydrolase; KEGG: mfa:Mfla_2046 NUDIX hydrolase; NUDIX hydrolase 718813..719388 Methylovorus glucosetrophus SIP3-4 8172827 YP_003050463.1 CDS Msip34_0688 NC_012969.1 719390 720244 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mfa:Mfla_2045 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 719390..720244 Methylovorus glucosetrophus SIP3-4 8172828 YP_003050464.1 CDS Msip34_0689 NC_012969.1 720404 721870 R PFAM: Pyridoxal-dependent decarboxylase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: mfa:Mfla_2033 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase complement(720404..721870) Methylovorus glucosetrophus SIP3-4 8172829 YP_003050465.1 CDS Msip34_0690 NC_012969.1 721870 722493 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: mfa:Mfla_2032 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(721870..722493) Methylovorus glucosetrophus SIP3-4 8172830 YP_003050466.1 CDS Msip34_0691 NC_012969.1 722551 722937 R KEGG: nmu:Nmul_A1081 hypothetical protein; hypothetical protein complement(722551..722937) Methylovorus glucosetrophus SIP3-4 8172831 YP_003050467.1 CDS Msip34_0692 NC_012969.1 723531 726122 D PFAM: Hemolysin-type calcium-binding region; KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4; hemolysin-type calcium-binding protein 723531..726122 Methylovorus glucosetrophus SIP3-4 8172833 YP_003050468.1 CDS Msip34_0693 NC_012969.1 726225 726836 R KEGG: mfa:Mfla_1780 hypothetical protein; hypothetical protein complement(726225..726836) Methylovorus glucosetrophus SIP3-4 8172834 YP_003050469.1 CDS Msip34_0694 NC_012969.1 727015 728160 D PFAM: phosphate-selective porin O and P; KEGG: mfa:Mfla_0157 hypothetical protein; phosphate-selective porin O and P 727015..728160 Methylovorus glucosetrophus SIP3-4 8172835 YP_003050470.1 CDS Msip34_0695 NC_012969.1 728277 729500 D PFAM: Acetamidase/Formamidase; KEGG: mfa:Mfla_1777 formamidase; formamidase 728277..729500 Methylovorus glucosetrophus SIP3-4 8172836 YP_003050471.1 CDS Msip34_0696 NC_012969.1 729542 729889 D TIGRFAM: regulatory protein, FmdB family; KEGG: mfa:Mfla_1776 glutamine amidotransferase, class-II; FmdB family regulatory protein 729542..729889 Methylovorus glucosetrophus SIP3-4 8172837 YP_003050472.1 CDS Msip34_0697 NC_012969.1 729970 731220 D TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: mfa:Mfla_1775 twin-arginine translocation pathway signal; urea ABC transporter urea-binding protein 729970..731220 Methylovorus glucosetrophus SIP3-4 8172838 YP_003050473.1 CDS Msip34_0698 NC_012969.1 731352 732269 D TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mfa:Mfla_1774 inner-membrane translocator; urea ABC transporter permease UrtB 731352..732269 Methylovorus glucosetrophus SIP3-4 8172839 YP_003050474.1 CDS Msip34_0699 NC_012969.1 732281 733447 D TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mfa:Mfla_1773 inner-membrane translocator; urea ABC transporter permease UrtC 732281..733447 Methylovorus glucosetrophus SIP3-4 8172840 YP_003050475.1 CDS Msip34_0700 NC_012969.1 733444 734187 D TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mfa:Mfla_1772 ABC transporter related; urea ABC transporter ATP-binding protein UrtD 733444..734187 Methylovorus glucosetrophus SIP3-4 8172841 YP_003050476.1 CDS Msip34_0701 NC_012969.1 734220 734909 D KEGG: mfa:Mfla_1771 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 734220..734909 Methylovorus glucosetrophus SIP3-4 8172842 YP_003050477.1 CDS Msip34_0702 NC_012969.1 735006 735875 D PFAM: Urease accessory protein UreD; KEGG: mfa:Mfla_1770 urease accessory protein UreD; Urease accessory protein UreD 735006..735875 Methylovorus glucosetrophus SIP3-4 8172843 YP_003050478.1 CDS ureA NC_012969.1 736014 736316 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 736014..736316 Methylovorus glucosetrophus SIP3-4 8172844 YP_003050479.1 CDS Msip34_0704 NC_012969.1 736355 736663 D KEGG: mfa:Mfla_1768 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta 736355..736663 Methylovorus glucosetrophus SIP3-4 8172845 YP_003050480.1 CDS ureC NC_012969.1 736660 738363 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 736660..738363 Methylovorus glucosetrophus SIP3-4 8172846 YP_003050481.1 CDS Msip34_0706 NC_012969.1 738363 738917 D PFAM: UreE urease accessory domain protein; KEGG: mfa:Mfla_1766 UreE urease accessory-like protein; UreE urease accessory domain-containing protein 738363..738917 Methylovorus glucosetrophus SIP3-4 8172847 YP_003050482.1 CDS Msip34_0707 NC_012969.1 738907 739593 D PFAM: Urease accessory protein UreF; KEGG: mfa:Mfla_1765 urease accessory protein UreF; Urease accessory protein UreF 738907..739593 Methylovorus glucosetrophus SIP3-4 8172848 YP_003050483.1 CDS Msip34_0708 NC_012969.1 739648 740274 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mfa:Mfla_1764 urease accessory protein UreG; urease accessory protein UreG 739648..740274 Methylovorus glucosetrophus SIP3-4 8172849 YP_003050484.1 CDS Msip34_0709 NC_012969.1 740314 740892 D PFAM: HupE/UreJ protein; KEGG: mfa:Mfla_1763 HupE/UreJ protein; HupE/UreJ protein 740314..740892 Methylovorus glucosetrophus SIP3-4 8172850 YP_003050485.1 CDS Msip34_0710 NC_012969.1 741213 744668 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mfa:Mfla_1762 periplasmic sensor hybrid histidine kinase; histidine kinase 741213..744668 Methylovorus glucosetrophus SIP3-4 8172851 YP_003050486.1 CDS Msip34_0711 NC_012969.1 744652 745596 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1761 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator 744652..745596 Methylovorus glucosetrophus SIP3-4 8172852 YP_003050487.1 CDS Msip34_0712 NC_012969.1 745722 748079 D PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo1256 putative serine/threonine protein kinase; serine/threonine protein kinase 745722..748079 Methylovorus glucosetrophus SIP3-4 8172853 YP_003050488.1 CDS Msip34_0713 NC_012969.1 748142 748402 D KEGG: pmy:Pmen_0467 hypothetical protein; hypothetical protein 748142..748402 Methylovorus glucosetrophus SIP3-4 8172854 YP_003050489.1 CDS Msip34_0714 NC_012969.1 748463 748714 R KEGG: mfa:Mfla_0979 hypothetical protein; hypothetical protein complement(748463..748714) Methylovorus glucosetrophus SIP3-4 8172855 YP_003050490.1 CDS Msip34_0715 NC_012969.1 748910 749167 R KEGG: mfa:Mfla_2600 hypothetical protein; hypothetical protein complement(748910..749167) Methylovorus glucosetrophus SIP3-4 8172856 YP_003050491.1 CDS Msip34_0716 NC_012969.1 749164 749838 R KEGG: pfl:PFL_2661 DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II complement(749164..749838) Methylovorus glucosetrophus SIP3-4 8172857 YP_003050492.1 CDS thrS NC_012969.1 750079 752001 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 750079..752001 Methylovorus glucosetrophus SIP3-4 8172858 YP_003050493.1 CDS Msip34_0718 NC_012969.1 752044 752568 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: mfa:Mfla_2002 translation initiation factor 3; translation initiation factor IF-3 752044..752568 Methylovorus glucosetrophus SIP3-4 8172859 YP_003050494.1 CDS Msip34_0719 NC_012969.1 752722 752919 D TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: mfa:Mfla_2001 50S ribosomal protein L35P; 50S ribosomal protein L35 752722..752919 Methylovorus glucosetrophus SIP3-4 8172860 YP_003050495.1 CDS rplT NC_012969.1 752931 753293 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 752931..753293 Methylovorus glucosetrophus SIP3-4 8172861 YP_003050496.1 CDS Msip34_0721 NC_012969.1 753455 754441 D KEGG: mfa:Mfla_1999 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 753455..754441 Methylovorus glucosetrophus SIP3-4 8172862 YP_003050497.1 CDS Msip34_0722 NC_012969.1 754447 756801 D KEGG: mfa:Mfla_1998 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 754447..756801 Methylovorus glucosetrophus SIP3-4 8172863 YP_003050498.1 CDS ihfA NC_012969.1 756879 757181 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 756879..757181 Methylovorus glucosetrophus SIP3-4 8172864 YP_003050499.1 CDS Msip34_0724 NC_012969.1 757162 757572 D PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mfa:Mfla_1996 MerR family transcriptional regulator; MerR family transcriptional regulator 757162..757572 Methylovorus glucosetrophus SIP3-4 8172865 YP_003050500.1 CDS Msip34_0725 NC_012969.1 757996 760101 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA; TonB-dependent siderophore receptor 757996..760101 Methylovorus glucosetrophus SIP3-4 8172867 YP_003050501.1 CDS Msip34_0726 NC_012969.1 760232 761725 D PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: eba:ebA4984 hypothetical protein; helicase domain-containing protein 760232..761725 Methylovorus glucosetrophus SIP3-4 8172868 YP_003050502.1 CDS Msip34_0727 NC_012969.1 761838 764288 R PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mpt:Mpe_A2969 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; type II secretion system protein E complement(761838..764288) Methylovorus glucosetrophus SIP3-4 8174624 YP_003050503.1 CDS Msip34_0728 NC_012969.1 764395 765642 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: lhk:LHK_02975 probable MFS transporter; Bcr/CflA subfamily drug resistance transporter complement(764395..765642) Methylovorus glucosetrophus SIP3-4 8172869 YP_003050504.1 CDS Msip34_0729 NC_012969.1 765800 767152 D KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase 765800..767152 Methylovorus glucosetrophus SIP3-4 8172870 YP_003050505.1 CDS Msip34_0730 NC_012969.1 767145 767789 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0815 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator 767145..767789 Methylovorus glucosetrophus SIP3-4 8172871 YP_003050506.1 CDS Msip34_0731 NC_012969.1 767799 767933 D hypothetical protein 767799..767933 Methylovorus glucosetrophus SIP3-4 8172872 YP_003050507.1 CDS Msip34_0732 NC_012969.1 767965 768600 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0815 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(767965..768600) Methylovorus glucosetrophus SIP3-4 8172873 YP_003050508.1 CDS Msip34_0733 NC_012969.1 768600 769940 R KEGG: mfa:Mfla_0817 signal transduction histidine kinase, glucose-6-phosphate specific; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase complement(768600..769940) Methylovorus glucosetrophus SIP3-4 8172874 YP_003050509.1 CDS Msip34_0734 NC_012969.1 770192 771988 D KEGG: mfa:Mfla_2044 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase 770192..771988 Methylovorus glucosetrophus SIP3-4 8172875 YP_003050510.1 CDS Msip34_0735 NC_012969.1 772111 772977 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mfa:Mfla_2043 extracellular solute-binding protein; family 3 extracellular solute-binding protein 772111..772977 Methylovorus glucosetrophus SIP3-4 8172876 YP_003050511.1 CDS Msip34_0736 NC_012969.1 773036 773509 D PFAM: cytochrome c class I; KEGG: vei:Veis_1827 cytochrome c, class I; class I cytochrome c 773036..773509 Methylovorus glucosetrophus SIP3-4 8172877 YP_003050512.1 CDS Msip34_0737 NC_012969.1 773593 773877 D PFAM: methanol dehydrogenase beta subunit; KEGG: mfa:Mfla_2041 methanol dehydrogenase, beta subunit; alcohol dehydrogenase 773593..773877 Methylovorus glucosetrophus SIP3-4 8172878 YP_003050513.1 CDS Msip34_0738 NC_012969.1 773992 775023 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_2040 ATPase; ATPase 773992..775023 Methylovorus glucosetrophus SIP3-4 8172879 YP_003050514.1 CDS Msip34_0739 NC_012969.1 775020 775958 D KEGG: mfa:Mfla_2039 hypothetical protein; hypothetical protein 775020..775958 Methylovorus glucosetrophus SIP3-4 8172880 YP_003050515.1 CDS Msip34_0740 NC_012969.1 775955 776893 D KEGG: mfa:Mfla_2038 hypothetical protein; hypothetical protein 775955..776893 Methylovorus glucosetrophus SIP3-4 8172881 YP_003050516.1 CDS Msip34_0741 NC_012969.1 776890 777891 D PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mca:MCA1528 MxaC protein, putative; von Willebrand factor type A 776890..777891 Methylovorus glucosetrophus SIP3-4 8172882 YP_003050517.1 CDS Msip34_0742 NC_012969.1 777879 778466 D KEGG: mca:MCA1529 MxaK protein, putative; MxaK protein 777879..778466 Methylovorus glucosetrophus SIP3-4 8172883 YP_003050518.1 CDS Msip34_0743 NC_012969.1 778463 779440 D KEGG: mfa:Mfla_2035 MxaL protein, putative; MxaL protein 778463..779440 Methylovorus glucosetrophus SIP3-4 8172884 YP_003050519.1 CDS Msip34_0744 NC_012969.1 779437 779967 D KEGG: rpc:RPC_1917 MxaD protein, putative; MxaD protein 779437..779967 Methylovorus glucosetrophus SIP3-4 8172885 YP_003050520.1 CDS Msip34_0745 NC_012969.1 780359 781756 D KEGG: mms:mma_1453 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase 780359..781756 Methylovorus glucosetrophus SIP3-4 8172886 YP_003050521.1 CDS Msip34_0746 NC_012969.1 781798 782442 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1987 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator 781798..782442 Methylovorus glucosetrophus SIP3-4 8172887 YP_003050522.1 CDS Msip34_0747 NC_012969.1 782649 783449 D KEGG: har:HEAR1864 hypothetical protein; hypothetical protein 782649..783449 Methylovorus glucosetrophus SIP3-4 8172888 YP_003050523.1 CDS Msip34_0748 NC_012969.1 783689 784489 D PFAM: flagellin domain protein; KEGG: mfa:Mfla_1986 flagellin-like protein; flagellin domain-containing protein 783689..784489 Methylovorus glucosetrophus SIP3-4 8172889 YP_003050524.1 CDS Msip34_0749 NC_012969.1 784573 784935 D PFAM: flagellar protein FlaG protein; KEGG: mfa:Mfla_1985 flagellar protein FlaG protein; flagellar protein FlaG protein 784573..784935 Methylovorus glucosetrophus SIP3-4 8172890 YP_003050525.1 CDS Msip34_0750 NC_012969.1 784958 786949 D PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: mfa:Mfla_1984 flagellar hook-associated 2-like protein; flagellar hook-associated 2 domain-containing protein 784958..786949 Methylovorus glucosetrophus SIP3-4 8172891 YP_003050526.1 CDS Msip34_0751 NC_012969.1 786975 787418 D TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: mfa:Mfla_1983 flagellar protein FliS; flagellar protein FliS 786975..787418 Methylovorus glucosetrophus SIP3-4 8172892 YP_003050527.1 CDS Msip34_0752 NC_012969.1 787418 787738 D KEGG: har:HEAR1870 putative flagellar synthesis (flagellar regulon); putative flagellar synthesis protein 787418..787738 Methylovorus glucosetrophus SIP3-4 8172893 YP_003050528.1 CDS Msip34_0753 NC_012969.1 787748 788869 D KEGG: mfa:Mfla_1981 hypothetical protein; hypothetical protein 787748..788869 Methylovorus glucosetrophus SIP3-4 8172894 YP_003050529.1 CDS Msip34_0754 NC_012969.1 788859 789164 D KEGG: mfa:Mfla_1980 putative flagellar biosynthetic protein; putative flagellar biosynthetic protein 788859..789164 Methylovorus glucosetrophus SIP3-4 8172895 YP_003050530.1 CDS fliE NC_012969.1 789185 789538 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(789185..789538) Methylovorus glucosetrophus SIP3-4 8172896 YP_003050531.1 CDS Msip34_0756 NC_012969.1 789743 791473 D TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: mfa:Mfla_1978 flagellar M-ring protein FliF; flagellar M-ring protein FliF 789743..791473 Methylovorus glucosetrophus SIP3-4 8172897 YP_003050532.1 CDS Msip34_0757 NC_012969.1 791470 792465 D TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: mfa:Mfla_1977 flagellar motor switch protein FliG; flagellar motor switch protein FliG 791470..792465 Methylovorus glucosetrophus SIP3-4 8172898 YP_003050533.1 CDS Msip34_0758 NC_012969.1 792458 793111 D PFAM: flagellar assembly protein FliH; KEGG: mfa:Mfla_1976 flagellar assembly protein FliH; flagellar assembly protein FliH 792458..793111 Methylovorus glucosetrophus SIP3-4 8172899 YP_003050534.1 CDS Msip34_0759 NC_012969.1 793111 794517 D KEGG: mfa:Mfla_1975 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; FliI/YscN family ATPase 793111..794517 Methylovorus glucosetrophus SIP3-4 8172900 YP_003050535.1 CDS Msip34_0760 NC_012969.1 794539 794988 D TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: mfa:Mfla_1974 flagellar export FliJ; flagellar export protein FliJ 794539..794988 Methylovorus glucosetrophus SIP3-4 8172901 YP_003050536.1 CDS Msip34_0761 NC_012969.1 795014 796258 D PFAM: flagellar hook-length control protein; KEGG: mms:mma_1436 flagellar hook-length control protein; flagellar hook-length control protein 795014..796258 Methylovorus glucosetrophus SIP3-4 8172902 YP_003050537.1 CDS fliL NC_012969.1 796499 797008 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 796499..797008 Methylovorus glucosetrophus SIP3-4 8172903 YP_003050538.1 CDS fliM NC_012969.1 797015 798019 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 797015..798019 Methylovorus glucosetrophus SIP3-4 8172904 YP_003050539.1 CDS Msip34_0764 NC_012969.1 798009 798446 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mms:mma_1433 FliN flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein FliN 798009..798446 Methylovorus glucosetrophus SIP3-4 8172905 YP_003050540.1 CDS Msip34_0765 NC_012969.1 798454 798867 D PFAM: flagellar biosynthesis protein FliO; KEGG: mfa:Mfla_1969 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein FliO 798454..798867 Methylovorus glucosetrophus SIP3-4 8172906 YP_003050541.1 CDS fliP NC_012969.1 798854 799630 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 798854..799630 Methylovorus glucosetrophus SIP3-4 8172907 YP_003050542.1 CDS Msip34_0767 NC_012969.1 799644 799913 D TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: mfa:Mfla_1967 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 799644..799913 Methylovorus glucosetrophus SIP3-4 8172908 YP_003050543.1 CDS Msip34_0768 NC_012969.1 799923 800693 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mfa:Mfla_1966 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 799923..800693 Methylovorus glucosetrophus SIP3-4 8172909 YP_003050544.1 CDS flgL NC_012969.1 800750 801655 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL complement(800750..801655) Methylovorus glucosetrophus SIP3-4 8172910 YP_003050545.1 CDS flgK NC_012969.1 801667 803610 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(801667..803610) Methylovorus glucosetrophus SIP3-4 8172911 YP_003050546.1 CDS Msip34_0771 NC_012969.1 803675 804586 R KEGG: mfa:Mfla_1962 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ complement(803675..804586) Methylovorus glucosetrophus SIP3-4 8172912 YP_003050547.1 CDS Msip34_0772 NC_012969.1 804597 805721 R PFAM: flagellar P-ring protein; KEGG: mfa:Mfla_1961 flagellar basal body P-ring protein; flagellar P-ring protein complement(804597..805721) Methylovorus glucosetrophus SIP3-4 8172913 YP_003050548.1 CDS Msip34_0773 NC_012969.1 805732 806418 R PFAM: flagellar L-ring protein; KEGG: mfa:Mfla_1960 flagellar L-ring protein; flagellar L-ring protein complement(805732..806418) Methylovorus glucosetrophus SIP3-4 8172914 YP_003050549.1 CDS Msip34_0774 NC_012969.1 806444 807226 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: nmu:Nmul_A1326 hypothetical protein; flagellar basal-body rod protein FlgG complement(806444..807226) Methylovorus glucosetrophus SIP3-4 8172915 YP_003050550.1 CDS Msip34_0775 NC_012969.1 807296 808036 R TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: mfa:Mfla_1958 flagellar basal-body rod FlgF; flagellar basal-body rod protein FlgF complement(807296..808036) Methylovorus glucosetrophus SIP3-4 8172916 YP_003050551.1 CDS flgE NC_012969.1 808075 809283 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(808075..809283) Methylovorus glucosetrophus SIP3-4 8172917 YP_003050552.1 CDS Msip34_0777 NC_012969.1 809319 809975 R PFAM: flagellar hook capping protein; KEGG: mfa:Mfla_1956 flagellar hook capping protein; flagellar hook capping protein complement(809319..809975) Methylovorus glucosetrophus SIP3-4 8172918 YP_003050553.1 CDS Msip34_0778 NC_012969.1 809996 810400 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: mfa:Mfla_1955 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(809996..810400) Methylovorus glucosetrophus SIP3-4 8172919 YP_003050554.1 CDS Msip34_0779 NC_012969.1 810426 810854 R TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mfa:Mfla_1954 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(810426..810854) Methylovorus glucosetrophus SIP3-4 8172920 YP_003050555.1 CDS Msip34_0780 NC_012969.1 811090 811818 D TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mfa:Mfla_1953 flageller protein FlgA; flagella basal body P-ring formation protein FlgA 811090..811818 Methylovorus glucosetrophus SIP3-4 8172921 YP_003050556.1 CDS Msip34_0781 NC_012969.1 811963 812274 D PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: mfa:Mfla_1952 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 811963..812274 Methylovorus glucosetrophus SIP3-4 8172922 YP_003050557.1 CDS Msip34_0782 NC_012969.1 812282 812740 D PFAM: FlgN family protein; KEGG: mfa:Mfla_1951 FlgN; FlgN family protein 812282..812740 Methylovorus glucosetrophus SIP3-4 8172923 YP_003050558.1 CDS Msip34_0783 NC_012969.1 812836 813354 R PFAM: MgtC/SapB transporter; KEGG: nmu:Nmul_A1508 MgtC/SapB transporter; MgtC/SapB transporter complement(812836..813354) Methylovorus glucosetrophus SIP3-4 8172924 YP_003050559.1 CDS Msip34_0784 NC_012969.1 813370 814395 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mca:MCA0041 Gfo/Idh/MocA family oxidoreductase; oxidoreductase domain-containing protein complement(813370..814395) Methylovorus glucosetrophus SIP3-4 8172925 YP_003050560.1 CDS Msip34_0785 NC_012969.1 814477 815418 R PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1950 OmpA/MotB; OmpA/MotB domain-containing protein complement(814477..815418) Methylovorus glucosetrophus SIP3-4 8172926 YP_003050561.1 CDS Msip34_0786 NC_012969.1 815434 816174 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1949 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(815434..816174) Methylovorus glucosetrophus SIP3-4 8172927 YP_003050562.1 CDS fliA NC_012969.1 816156 816890 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(816156..816890) Methylovorus glucosetrophus SIP3-4 8172928 YP_003050563.1 CDS Msip34_0788 NC_012969.1 817079 817906 R KEGG: har:HEAR1313 MotR; MotR protein complement(817079..817906) Methylovorus glucosetrophus SIP3-4 8172929 YP_003050564.1 CDS flhF NC_012969.1 817899 819257 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(817899..819257) Methylovorus glucosetrophus SIP3-4 8172930 YP_003050565.1 CDS Msip34_0790 NC_012969.1 819254 821335 R TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: mfa:Mfla_1945 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA complement(819254..821335) Methylovorus glucosetrophus SIP3-4 8172931 YP_003050566.1 CDS Msip34_0791 NC_012969.1 821335 822489 R TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mfa:Mfla_1944 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB complement(821335..822489) Methylovorus glucosetrophus SIP3-4 8172932 YP_003050567.1 CDS Msip34_0792 NC_012969.1 822556 822729 D hypothetical protein 822556..822729 Methylovorus glucosetrophus SIP3-4 8172933 YP_003050568.1 CDS Msip34_0793 NC_012969.1 823417 823734 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 823417..823734 Methylovorus glucosetrophus SIP3-4 8172934 YP_003050569.1 CDS Msip34_0794 NC_012969.1 823787 824326 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 823787..824326 Methylovorus glucosetrophus SIP3-4 8172935 YP_003050570.1 CDS Msip34_0795 NC_012969.1 824592 825368 D KEGG: mfa:Mfla_1941 hypothetical protein; hypothetical protein 824592..825368 Methylovorus glucosetrophus SIP3-4 8172936 YP_003050571.1 CDS Msip34_0796 NC_012969.1 825475 827979 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: azc:AZC_1333 TonB-dependent receptor; TonB-dependent siderophore receptor complement(825475..827979) Methylovorus glucosetrophus SIP3-4 8172937 YP_003050572.1 CDS Msip34_0797 NC_012969.1 828182 829183 R PFAM: FecR protein; KEGG: neu:NE1218 putative FecR protein; anti-FecI sigma factor FecR complement(828182..829183) Methylovorus glucosetrophus SIP3-4 8172938 YP_003050573.1 CDS Msip34_0798 NC_012969.1 829215 829757 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bpt:Bpet4455 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(829215..829757) Methylovorus glucosetrophus SIP3-4 8172939 YP_003050574.1 CDS Msip34_0799 NC_012969.1 829841 830005 R KEGG: bav:BAV2041 membrane protein; membrane protein complement(829841..830005) Methylovorus glucosetrophus SIP3-4 8172940 YP_003050575.1 CDS Msip34_0800 NC_012969.1 830002 831156 R PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE2432 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(830002..831156) Methylovorus glucosetrophus SIP3-4 8172941 YP_003050576.1 CDS Msip34_0801 NC_012969.1 831218 833671 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: neu:NE2433 TonB-dependent receptor protein; TonB-dependent siderophore receptor complement(831218..833671) Methylovorus glucosetrophus SIP3-4 8172942 YP_003050577.1 CDS Msip34_0802 NC_012969.1 833758 834753 R PFAM: FecR protein; KEGG: neu:NE1078 putative transmembrane sensor; anti-FecI sigma factor FecR complement(833758..834753) Methylovorus glucosetrophus SIP3-4 8172943 YP_003050578.1 CDS Msip34_0803 NC_012969.1 834806 835321 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_5893 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(834806..835321) Methylovorus glucosetrophus SIP3-4 8172944 YP_003050579.1 CDS Msip34_0804 NC_012969.1 835553 838102 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: xcb:XC_0558 ferric pseudobactin M114 receptor protein; TonB-dependent siderophore receptor complement(835553..838102) Methylovorus glucosetrophus SIP3-4 8172945 YP_003050580.1 CDS Msip34_0805 NC_012969.1 838314 839360 R PFAM: FecR protein; KEGG: neu:NE1102 putative transmembrane sensor; anti-FecI sigma factor FecR complement(838314..839360) Methylovorus glucosetrophus SIP3-4 8172946 YP_003050581.1 CDS Msip34_0806 NC_012969.1 839360 839860 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xca:xccb100_0572 ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(839360..839860) Methylovorus glucosetrophus SIP3-4 8172947 YP_003050582.1 CDS Msip34_0807 NC_012969.1 840472 841332 D KEGG: mms:mma_2099 flagellar motor protein MotA; flagellar motor protein MotA 840472..841332 Methylovorus glucosetrophus SIP3-4 8172948 YP_003050583.1 CDS motB NC_012969.1 841358 842308 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 841358..842308 Methylovorus glucosetrophus SIP3-4 8173768 YP_003050584.1 CDS Msip34_0809 NC_012969.1 842372 842920 D KEGG: har:HEAR1299 hypothetical protein; hypothetical protein 842372..842920 Methylovorus glucosetrophus SIP3-4 8172707 YP_003050585.1 CDS Msip34_0810 NC_012969.1 842993 843358 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1937 response regulator receiver domain-containing protein; response regulator receiver protein 842993..843358 Methylovorus glucosetrophus SIP3-4 8172708 YP_003050586.1 CDS Msip34_0811 NC_012969.1 843432 845831 D PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1936 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 843432..845831 Methylovorus glucosetrophus SIP3-4 8172709 YP_003050587.1 CDS Msip34_0812 NC_012969.1 845828 846331 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: geo:Geob_3695 CheW protein; CheW protein 845828..846331 Methylovorus glucosetrophus SIP3-4 8172710 YP_003050588.1 CDS Msip34_0813 NC_012969.1 846394 849159 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pap:PSPA7_0256 chemotaxis transducer; methyl-accepting chemotaxis sensory transducer 846394..849159 Methylovorus glucosetrophus SIP3-4 8172711 YP_003050589.1 CDS Msip34_0814 NC_012969.1 849531 849773 D hypothetical protein 849531..849773 Methylovorus glucosetrophus SIP3-4 8172712 YP_003050590.1 CDS Msip34_0815 NC_012969.1 850191 852818 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: xcv:XCV3021 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 850191..852818 Methylovorus glucosetrophus SIP3-4 8172713 YP_003050591.1 CDS Msip34_0816 NC_012969.1 853210 854103 D KEGG: har:HEAR1303 glutamate methyltransferase, chemotactic response regulator; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 853210..854103 Methylovorus glucosetrophus SIP3-4 8172714 YP_003050592.1 CDS Msip34_0817 NC_012969.1 854106 854711 D catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 854106..854711 Methylovorus glucosetrophus SIP3-4 8172715 YP_003050593.1 CDS Msip34_0818 NC_012969.1 854760 855836 D KEGG: mfa:Mfla_1930 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 854760..855836 Methylovorus glucosetrophus SIP3-4 8172716 YP_003050594.1 CDS Msip34_0819 NC_012969.1 855984 856382 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1929 response regulator receiver domain-containing protein; response regulator receiver protein 855984..856382 Methylovorus glucosetrophus SIP3-4 8172717 YP_003050595.1 CDS Msip34_0820 NC_012969.1 856384 857049 D PFAM: Chemotaxis phosphatase CheZ; KEGG: mfa:Mfla_1928 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 856384..857049 Methylovorus glucosetrophus SIP3-4 8172718 YP_003050596.1 CDS Msip34_0821 NC_012969.1 857163 857357 R PFAM: Heavy metal transport/detoxification protein; KEGG: bph:Bphy_1968 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(857163..857357) Methylovorus glucosetrophus SIP3-4 8172719 YP_003050597.1 CDS Msip34_0822 NC_012969.1 857738 859369 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 857738..859369 Methylovorus glucosetrophus SIP3-4 8172721 YP_003050598.1 CDS Msip34_0823 NC_012969.1 859578 861284 D KEGG: pae:PA3406 transport protein HasD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 859578..861284 Methylovorus glucosetrophus SIP3-4 8172722 YP_003050599.1 CDS Msip34_0824 NC_012969.1 861281 862609 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3587 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein 861281..862609 Methylovorus glucosetrophus SIP3-4 8172723 YP_003050600.1 CDS Msip34_0825 NC_012969.1 862643 863887 D PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_1956 glycosyl transferase group 1; group 1 glycosyl transferase 862643..863887 Methylovorus glucosetrophus SIP3-4 8172724 YP_003050601.1 CDS Msip34_0826 NC_012969.1 863894 864397 R KEGG: mfa:Mfla_1922 peptidase A2A; peptidase A2A complement(863894..864397) Methylovorus glucosetrophus SIP3-4 8172725 YP_003050602.1 CDS Msip34_0827 NC_012969.1 864410 865783 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: mfa:Mfla_1921 phosphomannomutase; phosphoglucomutase complement(864410..865783) Methylovorus glucosetrophus SIP3-4 8172726 YP_003050603.1 CDS Msip34_0828 NC_012969.1 865926 867320 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 865926..867320 Methylovorus glucosetrophus SIP3-4 8172727 YP_003050604.1 CDS Msip34_0829 NC_012969.1 867420 867614 R TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: mfa:Mfla_1920 hypothetical protein; FeS assembly protein IscX complement(867420..867614) Methylovorus glucosetrophus SIP3-4 8172728 YP_003050605.1 CDS Msip34_0830 NC_012969.1 867642 868709 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mfa:Mfla_1919 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(867642..868709) Methylovorus glucosetrophus SIP3-4 8172729 YP_003050606.1 CDS Msip34_0831 NC_012969.1 868725 870278 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region; KEGG: mfa:Mfla_1918 fumarase; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(868725..870278) Methylovorus glucosetrophus SIP3-4 8172730 YP_003050607.1 CDS glyA NC_012969.1 870594 871841 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 870594..871841 Methylovorus glucosetrophus SIP3-4 8172731 YP_003050608.1 CDS nrdR NC_012969.1 872006 872488 D PFAM: ATP-cone domain protein; KEGG: mfa:Mfla_1916 transcriptional regulator NrdR; transcriptional regulator NrdR 872006..872488 Methylovorus glucosetrophus SIP3-4 8172732 YP_003050609.1 CDS Msip34_0834 NC_012969.1 872493 873599 D KEGG: mfa:Mfla_1915 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 872493..873599 Methylovorus glucosetrophus SIP3-4 8172733 YP_003050610.1 CDS Msip34_0835 NC_012969.1 873648 874415 D PFAM: TatD-related deoxyribonuclease; KEGG: mfa:Mfla_1914 TatD-related deoxyribonuclease; TatD-like deoxyribonuclease 873648..874415 Methylovorus glucosetrophus SIP3-4 8172734 YP_003050611.1 CDS Msip34_0836 NC_012969.1 874625 877408 R PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain-containing protein; hypothetical protein complement(874625..877408) Methylovorus glucosetrophus SIP3-4 8172735 YP_003050612.1 CDS Msip34_0837 NC_012969.1 877451 877957 R KEGG: mfa:Mfla_1333 hypothetical protein; hypothetical protein complement(877451..877957) Methylovorus glucosetrophus SIP3-4 8172736 YP_003050613.1 CDS Msip34_0838 NC_012969.1 877944 878318 R PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1334 methylation; type II secretion system protein G complement(877944..878318) Methylovorus glucosetrophus SIP3-4 8172737 YP_003050614.1 CDS Msip34_0839 NC_012969.1 878321 878794 R KEGG: mfa:Mfla_1335 methylation; methylation protein complement(878321..878794) Methylovorus glucosetrophus SIP3-4 8172738 YP_003050615.1 CDS Msip34_0840 NC_012969.1 878805 880757 R PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_1336 type II and III secretion system protein; type II and III secretion system protein complement(878805..880757) Methylovorus glucosetrophus SIP3-4 8172739 YP_003050616.1 CDS Msip34_0841 NC_012969.1 880754 881296 R KEGG: mfa:Mfla_1337 hypothetical protein; hypothetical protein complement(880754..881296) Methylovorus glucosetrophus SIP3-4 8172740 YP_003050617.1 CDS Msip34_0842 NC_012969.1 881293 881856 R KEGG: mfa:Mfla_1338 putative transmembrane protein; hypothetical protein complement(881293..881856) Methylovorus glucosetrophus SIP3-4 8172741 YP_003050618.1 CDS Msip34_0843 NC_012969.1 881844 882365 R KEGG: mfa:Mfla_1339 hypothetical protein; hypothetical protein complement(881844..882365) Methylovorus glucosetrophus SIP3-4 8172742 YP_003050619.1 CDS Msip34_0844 NC_012969.1 882365 883288 R KEGG: mfa:Mfla_1340 hypothetical protein; hypothetical protein complement(882365..883288) Methylovorus glucosetrophus SIP3-4 8172743 YP_003050620.1 CDS Msip34_0845 NC_012969.1 883269 885035 R PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_1341 type II secretion system protein E; type II secretion system protein E complement(883269..885035) Methylovorus glucosetrophus SIP3-4 8172744 YP_003050621.1 CDS Msip34_0846 NC_012969.1 885032 886219 R PFAM: type II secretion system protein; KEGG: mfa:Mfla_1342 type II secretion system protein; type II secretion system protein complement(885032..886219) Methylovorus glucosetrophus SIP3-4 8172745 YP_003050622.1 CDS Msip34_0847 NC_012969.1 886257 886691 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1343 general secretion pathway protein G; general secretion pathway protein G complement(886257..886691) Methylovorus glucosetrophus SIP3-4 8172746 YP_003050623.1 CDS Msip34_0848 NC_012969.1 886708 887562 R KEGG: mfa:Mfla_1350 hypothetical protein; hypothetical protein complement(886708..887562) Methylovorus glucosetrophus SIP3-4 8172747 YP_003050624.1 CDS Msip34_0849 NC_012969.1 887637 888581 R KEGG: mfa:Mfla_1350 hypothetical protein; hypothetical protein complement(887637..888581) Methylovorus glucosetrophus SIP3-4 8172748 YP_003050625.1 CDS Msip34_0850 NC_012969.1 889447 890406 R KEGG: mfa:Mfla_1350 hypothetical protein; hypothetical protein complement(889447..890406) Methylovorus glucosetrophus SIP3-4 8172749 YP_003050626.1 CDS Msip34_0851 NC_012969.1 891151 893469 D KEGG: swp:swp_1383 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 891151..893469 Methylovorus glucosetrophus SIP3-4 8172750 YP_003050627.1 CDS Msip34_0852 NC_012969.1 893700 897812 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1351 TonB-dependent receptor; TonB-dependent receptor 893700..897812 Methylovorus glucosetrophus SIP3-4 8172751 YP_003050628.1 CDS Msip34_0853 NC_012969.1 897813 901400 D TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein; outer membrane autotransporter barrel domain-containing protein 897813..901400 Methylovorus glucosetrophus SIP3-4 8172752 YP_003050629.1 CDS mtnA NC_012969.1 901841 902938 D isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 901841..902938 Methylovorus glucosetrophus SIP3-4 8172753 YP_003050630.1 CDS Msip34_0855 NC_012969.1 903026 903682 D PFAM: class II aldolase/adducin family protein; KEGG: rfr:Rfer_3750 L-fuculose-phosphate aldolase; class II aldolase/adducin family protein 903026..903682 Methylovorus glucosetrophus SIP3-4 8172754 YP_003050631.1 CDS Msip34_0856 NC_012969.1 903729 905192 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: mfa:Mfla_1912 YjeF-related protein-like protein; carbohydrate kinase 903729..905192 Methylovorus glucosetrophus SIP3-4 8172755 YP_003050632.1 CDS pyrG NC_012969.1 905296 906924 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 905296..906924 Methylovorus glucosetrophus SIP3-4 8172756 YP_003050633.1 CDS Msip34_0858 NC_012969.1 907028 907867 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 907028..907867 Methylovorus glucosetrophus SIP3-4 8172757 YP_003050634.1 CDS eno NC_012969.1 908018 909304 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 908018..909304 Methylovorus glucosetrophus SIP3-4 8172758 YP_003050635.1 CDS Msip34_0860 NC_012969.1 909375 909689 D PFAM: Septum formation initiator; KEGG: mfa:Mfla_1908 cell division protein FtsB; septum formation initiator 909375..909689 Methylovorus glucosetrophus SIP3-4 8172759 YP_003050636.1 CDS Msip34_0861 NC_012969.1 909702 911165 D KEGG: mfa:Mfla_1907 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 909702..911165 Methylovorus glucosetrophus SIP3-4 8172760 YP_003050637.1 CDS Msip34_0862 NC_012969.1 911214 913991 R PFAM: Hemolysin-type calcium-binding region; KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4; hemolysin-type calcium-binding protein complement(911214..913991) Methylovorus glucosetrophus SIP3-4 8172761 YP_003050638.1 CDS Msip34_0863 NC_012969.1 914163 915197 R TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mfa:Mfla_1904 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ complement(914163..915197) Methylovorus glucosetrophus SIP3-4 8172762 YP_003050639.1 CDS Msip34_0864 NC_012969.1 915221 915688 D KEGG: pfo:Pfl01_1359 hypothetical protein; hypothetical protein 915221..915688 Methylovorus glucosetrophus SIP3-4 8172763 YP_003050640.1 CDS Msip34_0865 NC_012969.1 915652 916677 R SMART: von Willebrand factor type A; KEGG: mfa:Mfla_1900 von Willebrand factor, type A; von Willebrand factor type A complement(915652..916677) Methylovorus glucosetrophus SIP3-4 8172764 YP_003050641.1 CDS Msip34_0866 NC_012969.1 916680 917216 R KEGG: mfa:Mfla_1899 hypothetical protein; hypothetical protein complement(916680..917216) Methylovorus glucosetrophus SIP3-4 8172765 YP_003050642.1 CDS Msip34_0867 NC_012969.1 917207 918187 R PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mfa:Mfla_1898 von Willebrand factor, type A; von Willebrand factor type A complement(917207..918187) Methylovorus glucosetrophus SIP3-4 8172766 YP_003050643.1 CDS Msip34_0868 NC_012969.1 918184 919128 R KEGG: mfa:Mfla_1897 hypothetical protein; hypothetical protein complement(918184..919128) Methylovorus glucosetrophus SIP3-4 8172767 YP_003050644.1 CDS Msip34_0869 NC_012969.1 919128 919991 R KEGG: mfa:Mfla_1896 hypothetical protein; hypothetical protein complement(919128..919991) Methylovorus glucosetrophus SIP3-4 8172768 YP_003050645.1 CDS Msip34_0870 NC_012969.1 920094 921110 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mfa:Mfla_1895 ATPase; ATPase complement(920094..921110) Methylovorus glucosetrophus SIP3-4 8172769 YP_003050646.1 CDS Msip34_0871 NC_012969.1 921303 921818 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 921303..921818 Methylovorus glucosetrophus SIP3-4 8172770 YP_003050647.1 CDS Msip34_0872 NC_012969.1 921984 923204 D PFAM: Beta-ketoacyl synthase; KEGG: mfa:Mfla_1893 3-oxoacyl-[acyl-carrier-protein] synthase I; beta-ketoacyl synthase 921984..923204 Methylovorus glucosetrophus SIP3-4 8172771 YP_003050648.1 CDS Msip34_0873 NC_012969.1 923314 923697 R PFAM: protein of unknown function DUF498; KEGG: mfa:Mfla_1046 hypothetical protein; hypothetical protein complement(923314..923697) Methylovorus glucosetrophus SIP3-4 8172772 YP_003050649.1 CDS Msip34_0874 NC_012969.1 923780 925021 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 923780..925021 Methylovorus glucosetrophus SIP3-4 8172773 YP_003050650.1 CDS Msip34_0875 NC_012969.1 925094 926407 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 925094..926407 Methylovorus glucosetrophus SIP3-4 8172774 YP_003050651.1 CDS Msip34_0876 NC_012969.1 926407 927840 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 926407..927840 Methylovorus glucosetrophus SIP3-4 8172775 YP_003050652.1 CDS thyA NC_012969.1 927870 928664 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 927870..928664 Methylovorus glucosetrophus SIP3-4 8172776 YP_003050653.1 CDS Msip34_0878 NC_012969.1 928815 929342 D PFAM: Propeptide PepSY amd peptidase M4; KEGG: mfa:Mfla_1052 peptidase; propeptide PepSY amd peptidase M4 928815..929342 Methylovorus glucosetrophus SIP3-4 8172777 YP_003050654.1 CDS Msip34_0879 NC_012969.1 929478 929933 R KEGG: mfa:Mfla_1054 hypothetical protein; hypothetical protein complement(929478..929933) Methylovorus glucosetrophus SIP3-4 8172778 YP_003050655.1 CDS Msip34_0880 NC_012969.1 929948 930379 R PFAM: 17 kDa surface antigen; KEGG: lhk:LHK_01946 hypothetical protein; 17 kDa surface antigen complement(929948..930379) Methylovorus glucosetrophus SIP3-4 8172779 YP_003050656.1 CDS Msip34_0881 NC_012969.1 930385 930957 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated; transporter complement(930385..930957) Methylovorus glucosetrophus SIP3-4 8172780 YP_003050657.1 CDS Msip34_0882 NC_012969.1 931096 932490 R PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_1055 two component, sigma54 specific, fis family transcriptional regulator; putative Fis family two component sigma54 specific transcriptional regulator complement(931096..932490) Methylovorus glucosetrophus SIP3-4 8172781 YP_003050658.1 CDS Msip34_0883 NC_012969.1 932487 933086 R KEGG: mfa:Mfla_1056 hypothetical protein; hypothetical protein complement(932487..933086) Methylovorus glucosetrophus SIP3-4 8172782 YP_003050659.1 CDS Msip34_0884 NC_012969.1 933197 934639 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_1057 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(933197..934639) Methylovorus glucosetrophus SIP3-4 8172783 YP_003050660.1 CDS Msip34_0885 NC_012969.1 934784 935275 D PFAM: dihydrofolate reductase region; KEGG: mfa:Mfla_1058 dihydrofolate reductase; Dihydrofolate reductase 934784..935275 Methylovorus glucosetrophus SIP3-4 8172784 YP_003050661.1 CDS Msip34_0886 NC_012969.1 935292 936683 D PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU1547 TPR domain-containing protein; hypothetical protein 935292..936683 Methylovorus glucosetrophus SIP3-4 8172785 YP_003050662.1 CDS Msip34_0887 NC_012969.1 936795 939035 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mfa:Mfla_1059 ornithine decarboxylase; lysine decarboxylase complement(936795..939035) Methylovorus glucosetrophus SIP3-4 8172786 YP_003050663.1 CDS Msip34_0888 NC_012969.1 939328 940350 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mfa:Mfla_1230 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(939328..940350) Methylovorus glucosetrophus SIP3-4 8171900 YP_003050664.1 CDS Msip34_0889 NC_012969.1 940502 941719 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mfa:Mfla_1231 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(940502..941719) Methylovorus glucosetrophus SIP3-4 8174164 YP_003050665.1 CDS Msip34_0890 NC_012969.1 941762 942175 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mfa:Mfla_1232 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator complement(941762..942175) Methylovorus glucosetrophus SIP3-4 8174165 YP_003050666.1 CDS Msip34_0891 NC_012969.1 942464 942733 D hypothetical protein 942464..942733 Methylovorus glucosetrophus SIP3-4 8174166 YP_003050667.1 CDS Msip34_0892 NC_012969.1 942878 944737 D PFAM: ribonuclease II; KEGG: mfa:Mfla_1234 ribonuclease II; ribonuclease II 942878..944737 Methylovorus glucosetrophus SIP3-4 8174167 YP_003050668.1 CDS Msip34_0893 NC_012969.1 944730 945563 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 944730..945563 Methylovorus glucosetrophus SIP3-4 8174168 YP_003050669.1 CDS Msip34_0894 NC_012969.1 945560 946723 D PFAM: putative RNA methylase; THUMP domain protein; KEGG: mfa:Mfla_1236 putative RNA methylase; putative RNA methylase 945560..946723 Methylovorus glucosetrophus SIP3-4 8174169 YP_003050670.1 CDS Msip34_0895 NC_012969.1 946716 947090 D KEGG: mfa:Mfla_1237 hypothetical protein; hypothetical protein 946716..947090 Methylovorus glucosetrophus SIP3-4 8174170 YP_003050671.1 CDS Msip34_0896 NC_012969.1 947140 947538 R hypothetical protein complement(947140..947538) Methylovorus glucosetrophus SIP3-4 8174171 YP_003050672.1 CDS Msip34_0897 NC_012969.1 947651 951547 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 947651..951547 Methylovorus glucosetrophus SIP3-4 8174172 YP_003050673.1 CDS Msip34_0898 NC_012969.1 951603 952085 D PFAM: Ankyrin; SMART: Ankyrin; KEGG: mfa:Mfla_1032 ankyrin; ankyrin 951603..952085 Methylovorus glucosetrophus SIP3-4 8174173 YP_003050674.1 CDS Msip34_0899 NC_012969.1 952224 952592 D KEGG: mpt:Mpe_A2428 putative cytochrome c; Cytochrome c553-like protein 952224..952592 Methylovorus glucosetrophus SIP3-4 8174174 YP_003050675.1 CDS Msip34_0900 NC_012969.1 952585 953847 D PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_A3575 uncharacterized NAD(FAD)-dependent dehydrogenase; flavocytochrome c sulfide dehydrogenase 952585..953847 Methylovorus glucosetrophus SIP3-4 8174175 YP_003050676.1 CDS Msip34_0901 NC_012969.1 953880 955109 D KEGG: mfa:Mfla_1033 L-sorbosone dehydrogenase, putative; L-sorbosone dehydrogenase 953880..955109 Methylovorus glucosetrophus SIP3-4 8174176 YP_003050677.1 CDS Msip34_0902 NC_012969.1 955134 955721 D KEGG: mfa:Mfla_1034 hypothetical protein; hypothetical protein 955134..955721 Methylovorus glucosetrophus SIP3-4 8174177 YP_003050678.1 CDS Msip34_0903 NC_012969.1 955743 956615 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mfa:Mfla_1036 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein 955743..956615 Methylovorus glucosetrophus SIP3-4 8174178 YP_003050679.1 CDS Msip34_0904 NC_012969.1 956704 957546 R KEGG: mfa:Mfla_1890 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB complement(956704..957546) Methylovorus glucosetrophus SIP3-4 8174179 YP_003050680.1 CDS sucC NC_012969.1 957688 958866 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 957688..958866 Methylovorus glucosetrophus SIP3-4 8174180 YP_003050681.1 CDS Msip34_0906 NC_012969.1 958869 959756 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; KEGG: mfa:Mfla_1888 succinyl-CoA synthetase (ADP-forming) alpha subunit; succinyl-CoA synthetase subunit alpha 958869..959756 Methylovorus glucosetrophus SIP3-4 8174181 YP_003050682.1 CDS Msip34_0907 NC_012969.1 959772 960749 D SMART: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin; ankyrin 959772..960749 Methylovorus glucosetrophus SIP3-4 8174182 YP_003050683.1 CDS Msip34_0908 NC_012969.1 960730 962382 D TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; ExsB family protein; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mfa:Mfla_1886 NH(3)-dependent NAD(+) synthetase; NAD+ synthetase 960730..962382 Methylovorus glucosetrophus SIP3-4 8174183 YP_003050684.1 CDS Msip34_0909 NC_012969.1 962415 962753 D PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_1885 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 962415..962753 Methylovorus glucosetrophus SIP3-4 8174184 YP_003050685.1 CDS Msip34_0910 NC_012969.1 962783 963124 D PFAM: protein of unknown function DUF486; KEGG: net:Neut_0429 hypothetical protein; hypothetical protein 962783..963124 Methylovorus glucosetrophus SIP3-4 8174185 YP_003050686.1 CDS Msip34_0911 NC_012969.1 963289 965073 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: mca:MCA1097 ferrous iron transport protein B; ferrous iron transport protein B complement(963289..965073) Methylovorus glucosetrophus SIP3-4 8174186 YP_003050687.1 CDS Msip34_0912 NC_012969.1 965070 965297 R PFAM: FeoA family protein; KEGG: mca:MCA1098 ferrous iron transport protein A; FeoA family protein complement(965070..965297) Methylovorus glucosetrophus SIP3-4 8174187 YP_003050688.1 CDS Msip34_0913 NC_012969.1 965345 967144 R PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: mfa:Mfla_1882 peptidase M61; peptidase M61 domain-containing protein complement(965345..967144) Methylovorus glucosetrophus SIP3-4 8174188 YP_003050689.1 CDS Msip34_0914 NC_012969.1 967328 968131 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_1881 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(967328..968131) Methylovorus glucosetrophus SIP3-4 8174189 YP_003050690.1 CDS Msip34_0915 NC_012969.1 968167 968433 R PFAM: BolA family protein; KEGG: mfa:Mfla_1880 transcriptional regulator BolA; BolA family protein complement(968167..968433) Methylovorus glucosetrophus SIP3-4 8174190 YP_003050691.1 CDS Msip34_0916 NC_012969.1 968433 968735 R PFAM: YCII-related; KEGG: mfa:Mfla_1879 YCII-related; YCII-like protein complement(968433..968735) Methylovorus glucosetrophus SIP3-4 8174191 YP_003050692.1 CDS Msip34_0917 NC_012969.1 968735 969268 R TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mfa:Mfla_1878 intracellular septation protein A; intracellular septation protein A complement(968735..969268) Methylovorus glucosetrophus SIP3-4 8174192 YP_003050693.1 CDS Msip34_0918 NC_012969.1 969403 970299 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mfa:Mfla_1877 PHP-like protein; PHP domain-containing protein 969403..970299 Methylovorus glucosetrophus SIP3-4 8174193 YP_003050694.1 CDS Msip34_0919 NC_012969.1 970316 970945 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: mfa:Mfla_1876 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 970316..970945 Methylovorus glucosetrophus SIP3-4 8174194 YP_003050695.1 CDS Msip34_0920 NC_012969.1 970978 971616 D PFAM: peptidase M50; KEGG: mfa:Mfla_1875 peptidase M50; peptidase M50 970978..971616 Methylovorus glucosetrophus SIP3-4 8174195 YP_003050696.1 CDS Msip34_0921 NC_012969.1 971645 972847 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 971645..972847 Methylovorus glucosetrophus SIP3-4 8174196 YP_003050697.1 CDS Msip34_0922 NC_012969.1 972855 973187 D PFAM: small multidrug resistance protein; KEGG: bbr:BB3914 putative membrane transport protein; small multidrug resistance protein 972855..973187 Methylovorus glucosetrophus SIP3-4 8174197 YP_003050698.1 CDS Msip34_0923 NC_012969.1 973187 973969 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfa:Mfla_1874 condensin subunit ScpA; chromosome segregation and condensation protein ScpA 973187..973969 Methylovorus glucosetrophus SIP3-4 8174198 YP_003050699.1 CDS Msip34_0924 NC_012969.1 973974 974537 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mfa:Mfla_1873 condensin subunit ScpB; chromosome segregation and condensation protein ScpB 973974..974537 Methylovorus glucosetrophus SIP3-4 8174199 YP_003050700.1 CDS Msip34_0925 NC_012969.1 974612 975700 D PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_1872 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 974612..975700 Methylovorus glucosetrophus SIP3-4 8174200 YP_003050701.1 CDS Msip34_0926 NC_012969.1 975732 977780 R KEGG: gbm:Gbem_0113 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(975732..977780) Methylovorus glucosetrophus SIP3-4 8174201 YP_003050702.1 CDS Msip34_0927 NC_012969.1 977770 978294 R KEGG: dar:Daro_2951 hypothetical protein; hypothetical protein complement(977770..978294) Methylovorus glucosetrophus SIP3-4 8174202 YP_003050703.1 CDS Msip34_0928 NC_012969.1 978294 980246 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dar:Daro_2952 TonB-dependent receptor; TonB-dependent receptor complement(978294..980246) Methylovorus glucosetrophus SIP3-4 8174203 YP_003050704.1 CDS Msip34_0929 NC_012969.1 980348 981262 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(980348..981262) Methylovorus glucosetrophus SIP3-4 8174204 YP_003050705.1 CDS Msip34_0930 NC_012969.1 981259 982386 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(981259..982386) Methylovorus glucosetrophus SIP3-4 8174205 YP_003050706.1 CDS Msip34_0931 NC_012969.1 982379 982747 R PFAM: arsenate reductase and related; KEGG: mfa:Mfla_1868 hypothetical protein; arsenate reductase-like protein complement(982379..982747) Methylovorus glucosetrophus SIP3-4 8174206 YP_003050707.1 CDS dapD NC_012969.1 982912 983739 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(982912..983739) Methylovorus glucosetrophus SIP3-4 8174207 YP_003050708.1 CDS Msip34_0933 NC_012969.1 983869 984708 R PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1865 peptidase M48, Ste24p; peptidase M48 Ste24p complement(983869..984708) Methylovorus glucosetrophus SIP3-4 8174208 YP_003050709.1 CDS Msip34_0934 NC_012969.1 984798 986681 R PFAM: K potassium transporter; KEGG: dar:Daro_0485 K+ potassium transporter; K potassium transporter complement(984798..986681) Methylovorus glucosetrophus SIP3-4 8174209 YP_003050710.1 CDS Msip34_0935 NC_012969.1 986999 987784 D PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1203 hypothetical protein; hypothetical protein 986999..987784 Methylovorus glucosetrophus SIP3-4 8174210 YP_003050711.1 CDS xseA NC_012969.1 987868 989070 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(987868..989070) Methylovorus glucosetrophus SIP3-4 8174211 YP_003050712.1 CDS Msip34_0937 NC_012969.1 989131 989631 D PFAM: Disulphide bond formation protein DsbB; KEGG: mfa:Mfla_1862 disulphide bond formation protein DsbB; Disulfide bond formation protein DsbB 989131..989631 Methylovorus glucosetrophus SIP3-4 8174212 YP_003050713.1 CDS cysM NC_012969.1 989643 990530 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 989643..990530 Methylovorus glucosetrophus SIP3-4 8174213 YP_003050714.1 CDS Msip34_0939 NC_012969.1 990660 992405 D KEGG: mfa:Mfla_1860 hypothetical protein; hypothetical protein 990660..992405 Methylovorus glucosetrophus SIP3-4 8174214 YP_003050715.1 CDS Msip34_0940 NC_012969.1 992419 992613 D KEGG: mfa:Mfla_1854 hypothetical protein; hypothetical protein 992419..992613 Methylovorus glucosetrophus SIP3-4 8174215 YP_003050716.1 CDS Msip34_0941 NC_012969.1 992624 993043 D KEGG: mfa:Mfla_1853 hypothetical protein; hypothetical protein 992624..993043 Methylovorus glucosetrophus SIP3-4 8174216 YP_003050717.1 CDS Msip34_0942 NC_012969.1 993145 993924 D KEGG: mfa:Mfla_1852 hypothetical protein; hypothetical protein 993145..993924 Methylovorus glucosetrophus SIP3-4 8174217 YP_003050718.1 CDS Msip34_0943 NC_012969.1 994024 994149 R hypothetical protein complement(994024..994149) Methylovorus glucosetrophus SIP3-4 8174218 YP_003050719.1 CDS Msip34_0944 NC_012969.1 994359 994949 D KEGG: azo:azo0662 hypothetical protein; hypothetical protein 994359..994949 Methylovorus glucosetrophus SIP3-4 8174219 YP_003050720.1 CDS Msip34_0945 NC_012969.1 995228 996223 D PFAM: NMT1/THI5 like domain protein; KEGG: mfa:Mfla_1859 ABC transport system substrate-binding protein; NMT1/THI5 like domain-containing protein 995228..996223 Methylovorus glucosetrophus SIP3-4 8174220 YP_003050721.1 CDS Msip34_0946 NC_012969.1 996255 997217 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1858 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 996255..997217 Methylovorus glucosetrophus SIP3-4 8174221 YP_003050722.1 CDS Msip34_0947 NC_012969.1 997224 998138 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1857 ABC transporter related; ABC transporter-like protein 997224..998138 Methylovorus glucosetrophus SIP3-4 8174222 YP_003050723.1 CDS Msip34_0948 NC_012969.1 998143 998913 D PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase; creatininase 998143..998913 Methylovorus glucosetrophus SIP3-4 8174223 YP_003050724.1 CDS Msip34_0949 NC_012969.1 998977 1000341 D TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mfa:Mfla_1856 L-glutamine synthetase; glutamine synthetase 998977..1000341 Methylovorus glucosetrophus SIP3-4 8174224 YP_003050725.1 CDS Msip34_0950 NC_012969.1 1000438 1000911 D PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; KEGG: mfa:Mfla_1855 CopG family transcriptional regulator; CopG family transcriptional regulator NikR 1000438..1000911 Methylovorus glucosetrophus SIP3-4 8174225 YP_003050726.1 CDS Msip34_0951 NC_012969.1 1000938 1001666 D TIGRFAM: urea carboxylase-associated protein 2; KEGG: pna:Pnap_0038 hypothetical protein; urea carboxylase-associated protein 2 1000938..1001666 Methylovorus glucosetrophus SIP3-4 8174226 YP_003050727.1 CDS Msip34_0952 NC_012969.1 1001663 1002325 D TIGRFAM: urea carboxylase-associated protein 1; KEGG: pna:Pnap_0037 hypothetical protein; urea carboxylase-associated protein 1 1001663..1002325 Methylovorus glucosetrophus SIP3-4 8174227 YP_003050728.1 CDS Msip34_0953 NC_012969.1 1002468 1006094 D KEGG: dar:Daro_0074 allophanate hydrolase subunit 2; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 1002468..1006094 Methylovorus glucosetrophus SIP3-4 8174228 YP_003050729.1 CDS Msip34_0955 NC_012969.1 1008023 1008904 D KEGG: eba:ebA2214 hypothetical protein; hypothetical protein 1008023..1008904 Methylovorus glucosetrophus SIP3-4 8174230 YP_003050730.1 CDS Msip34_0956 NC_012969.1 1008980 1010350 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_0020 ethanolamine transproter; ethanolamine transporter 1008980..1010350 Methylovorus glucosetrophus SIP3-4 8174231 YP_003050731.1 CDS Msip34_0957 NC_012969.1 1010485 1011882 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: tau:Tola_1536 ethanolamine ammonia-lyase; ethanolamine ammonia-lyase 1010485..1011882 Methylovorus glucosetrophus SIP3-4 8174232 YP_003050732.1 CDS Msip34_0958 NC_012969.1 1011889 1012704 D PFAM: Ethanolamine ammonia-lyase light chain; KEGG: azo:azo3830 putative ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase 1011889..1012704 Methylovorus glucosetrophus SIP3-4 8174233 YP_003050733.1 CDS Msip34_0959 NC_012969.1 1012705 1013625 R PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rme:Rmet_1823 heat shock protein DnaJ-like protein; heat shock protein DnaJ domain-containing protein complement(1012705..1013625) Methylovorus glucosetrophus SIP3-4 8174234 YP_003050734.1 CDS Msip34_0960 NC_012969.1 1013953 1015035 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1013953..1015035 Methylovorus glucosetrophus SIP3-4 8174235 YP_003050735.1 CDS Msip34_0961 NC_012969.1 1015153 1016187 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2757 AraC family transcriptional regulator; AraC family transcriptional regulator complement(1015153..1016187) Methylovorus glucosetrophus SIP3-4 8174236 YP_003050736.1 CDS rumA NC_012969.1 1016326 1017699 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1016326..1017699 Methylovorus glucosetrophus SIP3-4 8174237 YP_003050737.1 CDS Msip34_0963 NC_012969.1 1017750 1018274 R PFAM: GCN5-related N-acetyltransferase; KEGG: xop:PXO_01975 acetyltransferase; N-acetyltransferase GCN5 complement(1017750..1018274) Methylovorus glucosetrophus SIP3-4 8174238 YP_003050738.1 CDS Msip34_0964 NC_012969.1 1018281 1018883 R PFAM: isochorismatase hydrolase; KEGG: bid:Bind_1386 isochorismatase hydrolase; isochorismatase hydrolase complement(1018281..1018883) Methylovorus glucosetrophus SIP3-4 8174239 YP_003050739.1 CDS Msip34_0965 NC_012969.1 1019074 1020531 D PFAM: extracellular solute-binding protein family 5; KEGG: mfa:Mfla_1850 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1019074..1020531 Methylovorus glucosetrophus SIP3-4 8174240 YP_003050740.1 CDS Msip34_0966 NC_012969.1 1020521 1021015 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mfa:Mfla_1849 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1020521..1021015 Methylovorus glucosetrophus SIP3-4 8174241 YP_003050741.1 CDS Msip34_0967 NC_012969.1 1020996 1021916 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1848 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1020996..1021916 Methylovorus glucosetrophus SIP3-4 8174242 YP_003050742.1 CDS Msip34_0968 NC_012969.1 1021913 1022701 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1847 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1021913..1022701 Methylovorus glucosetrophus SIP3-4 8174243 YP_003050743.1 CDS Msip34_0969 NC_012969.1 1022753 1023463 D TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: mfa:Mfla_1846 hypothetical protein; hypothetical protein 1022753..1023463 Methylovorus glucosetrophus SIP3-4 8173030 YP_003050744.1 CDS Msip34_0970 NC_012969.1 1023488 1024543 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1023488..1024543 Methylovorus glucosetrophus SIP3-4 8173140 YP_003050745.1 CDS Msip34_0971 NC_012969.1 1024643 1025335 D PFAM: protein of unknown function UPF0005; KEGG: mfa:Mfla_1843 hypothetical protein; hypothetical protein 1024643..1025335 Methylovorus glucosetrophus SIP3-4 8173141 YP_003050746.1 CDS Msip34_0972 NC_012969.1 1025452 1025979 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mfa:Mfla_1840 tRNA-adenosine deaminase; zinc-binding CMP/dCMP deaminase complement(1025452..1025979) Methylovorus glucosetrophus SIP3-4 8173142 YP_003050747.1 CDS Msip34_0973 NC_012969.1 1026074 1028035 R PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: mfa:Mfla_1839 transglutaminase-like protein; transglutaminase domain-containing protein complement(1026074..1028035) Methylovorus glucosetrophus SIP3-4 8173143 YP_003050748.1 CDS Msip34_0974 NC_012969.1 1028032 1029009 R PFAM: protein of unknown function DUF58; KEGG: mfa:Mfla_1838 hypothetical protein; hypothetical protein complement(1028032..1029009) Methylovorus glucosetrophus SIP3-4 8173144 YP_003050749.1 CDS Msip34_0975 NC_012969.1 1029029 1029949 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mfa:Mfla_1837 ATPase; ATPase complement(1029029..1029949) Methylovorus glucosetrophus SIP3-4 8173145 YP_003050750.1 CDS Msip34_0976 NC_012969.1 1029956 1030438 R KEGG: mfa:Mfla_1836 hypothetical protein; hypothetical protein complement(1029956..1030438) Methylovorus glucosetrophus SIP3-4 8173146 YP_003050751.1 CDS Msip34_0977 NC_012969.1 1030553 1031455 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_1835 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1030553..1031455) Methylovorus glucosetrophus SIP3-4 8173147 YP_003050752.1 CDS Msip34_0978 NC_012969.1 1031553 1032281 D PFAM: Pirin domain protein; KEGG: mfa:Mfla_1833 pirin-like protein; Pirin domain-containing protein 1031553..1032281 Methylovorus glucosetrophus SIP3-4 8173148 YP_003050753.1 CDS Msip34_0979 NC_012969.1 1032340 1032909 D KEGG: mfa:Mfla_1832 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1032340..1032909 Methylovorus glucosetrophus SIP3-4 8173149 YP_003050754.1 CDS Msip34_0980 NC_012969.1 1032937 1033512 D PFAM: YceI family protein; KEGG: mfa:Mfla_1831 YceI; hypothetical protein 1032937..1033512 Methylovorus glucosetrophus SIP3-4 8173150 YP_003050755.1 CDS Msip34_0981 NC_012969.1 1033583 1034659 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mfa:Mfla_1830 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1033583..1034659 Methylovorus glucosetrophus SIP3-4 8173151 YP_003050756.1 CDS Msip34_0982 NC_012969.1 1034725 1035324 D PFAM: nitroreductase; KEGG: mfa:Mfla_1829 nitroreductase; nitroreductase 1034725..1035324 Methylovorus glucosetrophus SIP3-4 8173152 YP_003050757.1 CDS Msip34_0983 NC_012969.1 1035441 1035830 D PFAM: Thioredoxin domain; KEGG: mfa:Mfla_1828 thioredoxin-related; thioredoxin domain-containing protein 1035441..1035830 Methylovorus glucosetrophus SIP3-4 8173153 YP_003050758.1 CDS Msip34_0984 NC_012969.1 1035925 1036257 R KEGG: mfa:Mfla_1827 hypothetical protein; hypothetical protein complement(1035925..1036257) Methylovorus glucosetrophus SIP3-4 8173154 YP_003050759.1 CDS Msip34_0985 NC_012969.1 1036285 1037349 R PFAM: Peptidase M23; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1826 peptidase M23B; peptidase M23 complement(1036285..1037349) Methylovorus glucosetrophus SIP3-4 8173155 YP_003050760.1 CDS Msip34_0986 NC_012969.1 1037346 1038014 R KEGG: mfa:Mfla_1825 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(1037346..1038014) Methylovorus glucosetrophus SIP3-4 8173156 YP_003050761.1 CDS surE NC_012969.1 1038024 1038767 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(1038024..1038767) Methylovorus glucosetrophus SIP3-4 8173157 YP_003050762.1 CDS Msip34_0988 NC_012969.1 1038821 1039210 R KEGG: tbd:Tbd_1980 hypothetical protein; hypothetical protein complement(1038821..1039210) Methylovorus glucosetrophus SIP3-4 8173158 YP_003050763.1 CDS Msip34_0989 NC_012969.1 1039207 1039920 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mca:MCA0309 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1039207..1039920) Methylovorus glucosetrophus SIP3-4 8173159 YP_003050764.1 CDS Msip34_0990 NC_012969.1 1039963 1040556 R TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: mfa:Mfla_1823 flavodoxin/nitric oxide synthase; flavoprotein WrbA complement(1039963..1040556) Methylovorus glucosetrophus SIP3-4 8173160 YP_003050765.1 CDS Msip34_0991 NC_012969.1 1040553 1041380 R PFAM: protein of unknown function DUF88; KEGG: mfa:Mfla_1822 hypothetical protein; hypothetical protein complement(1040553..1041380) Methylovorus glucosetrophus SIP3-4 8173161 YP_003050766.1 CDS Msip34_0992 NC_012969.1 1041392 1042762 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1041392..1042762) Methylovorus glucosetrophus SIP3-4 8173162 YP_003050767.1 CDS Msip34_0993 NC_012969.1 1042983 1043399 D PFAM: Calcium-binding EF-hand-containing protein; calcium-binding domain-containing protein 1042983..1043399 Methylovorus glucosetrophus SIP3-4 8173163 YP_003050768.1 CDS Msip34_0994 NC_012969.1 1043488 1045512 R KEGG: noc:Noc_0226 PAS sensor diguanylate cyclase and phophodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1043488..1045512) Methylovorus glucosetrophus SIP3-4 8173164 YP_003050769.1 CDS Msip34_0995 NC_012969.1 1046189 1046887 D PFAM: peptidase S24 and S26 domain protein; KEGG: neu:NE0318 hypothetical protein; putative phage repressor 1046189..1046887 Methylovorus glucosetrophus SIP3-4 8173165 YP_003050770.1 CDS Msip34_0996 NC_012969.1 1047170 1049743 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1047170..1049743 Methylovorus glucosetrophus SIP3-4 8173166 YP_003050771.1 CDS Msip34_0997 NC_012969.1 1049878 1050390 D KEGG: mfa:Mfla_1816 hypothetical protein; hypothetical protein 1049878..1050390 Methylovorus glucosetrophus SIP3-4 8173167 YP_003050772.1 CDS Msip34_0998 NC_012969.1 1050394 1051029 R KEGG: cco:CCC13826_2027 pTet43; hypothetical protein complement(1050394..1051029) Methylovorus glucosetrophus SIP3-4 8173168 YP_003050773.1 CDS Msip34_0999 NC_012969.1 1051136 1051675 R PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1808 hypothetical protein; hypothetical protein complement(1051136..1051675) Methylovorus glucosetrophus SIP3-4 8173169 YP_003050774.1 CDS Msip34_1000 NC_012969.1 1051761 1052606 R PFAM: protein of unknown function DUF519; KEGG: mfa:Mfla_1807 hypothetical protein; hypothetical protein complement(1051761..1052606) Methylovorus glucosetrophus SIP3-4 8173170 YP_003050775.1 CDS Msip34_1001 NC_012969.1 1052625 1053146 R PFAM: superoxide dismutase copper/zinc binding; KEGG: ent:Ent638_1801 superoxide dismutase; copper/zinc binding superoxide dismutase complement(1052625..1053146) Methylovorus glucosetrophus SIP3-4 8173171 YP_003050776.1 CDS Msip34_1002 NC_012969.1 1053325 1053624 D KEGG: mlo:mll5457 acid shock protein; hypothetical protein 1053325..1053624 Methylovorus glucosetrophus SIP3-4 8173172 YP_003050777.1 CDS Msip34_1003 NC_012969.1 1053743 1054744 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mfa:Mfla_1806 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1053743..1054744 Methylovorus glucosetrophus SIP3-4 8173173 YP_003050778.1 CDS Msip34_1004 NC_012969.1 1054817 1054999 D PFAM: 4-oxalocrotonate tautomerase; KEGG: mfa:Mfla_1805 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1054817..1054999 Methylovorus glucosetrophus SIP3-4 8173174 YP_003050779.1 CDS uvrC NC_012969.1 1055127 1056929 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1055127..1056929 Methylovorus glucosetrophus SIP3-4 8173175 YP_003050780.1 CDS Msip34_1006 NC_012969.1 1056974 1057543 D KEGG: mfa:Mfla_1803 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1056974..1057543 Methylovorus glucosetrophus SIP3-4 8173176 YP_003050781.1 CDS Msip34_1007 NC_012969.1 1058128 1058526 D PFAM: PsiF repeat protein; KEGG: mfa:Mfla_2601 PsiF; PsiF repeat-containing protein 1058128..1058526 Methylovorus glucosetrophus SIP3-4 8173180 YP_003050782.1 CDS Msip34_1008 NC_012969.1 1058697 1060850 D KEGG: azo:azo0646 toxin secretion ABC transporter permease and ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; type I secretion system ATPase 1058697..1060850 Methylovorus glucosetrophus SIP3-4 8173181 YP_003050783.1 CDS Msip34_1009 NC_012969.1 1060847 1062259 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3201 type I secretion membrane fusion protein, HlyD; HlyD family type I secretion membrane fusion protein 1060847..1062259 Methylovorus glucosetrophus SIP3-4 8173182 YP_003050784.1 CDS Msip34_1010 NC_012969.1 1062267 1062884 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: azo:azo0648 LuxR family transcriptional regulator; LuxR family transcriptional regulator 1062267..1062884 Methylovorus glucosetrophus SIP3-4 8173183 YP_003050785.1 CDS Msip34_1011 NC_012969.1 1062983 1067593 D KEGG: pfo:Pfl01_1463 VCBS; TIGRFAM: outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Hemolysin-type calcium-binding region; SMART: von Willebrand factor type A; outer membrane adhesin-like protein 1062983..1067593 Methylovorus glucosetrophus SIP3-4 8173184 YP_003050786.1 CDS Msip34_1012 NC_012969.1 1067613 1067945 D KEGG: cja:CJA_1397 hypothetical protein; hypothetical protein 1067613..1067945 Methylovorus glucosetrophus SIP3-4 8173185 YP_003050787.1 CDS Msip34_1013 NC_012969.1 1068094 1070028 R PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: eba:ebA1787 hypothetical protein; diguanylate cyclase/phosphodiesterase complement(1068094..1070028) Methylovorus glucosetrophus SIP3-4 8173186 YP_003050788.1 CDS Msip34_1014 NC_012969.1 1070055 1070711 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: eba:ebA1785 hypothetical protein; transglutaminase complement(1070055..1070711) Methylovorus glucosetrophus SIP3-4 8173187 YP_003050789.1 CDS Msip34_1015 NC_012969.1 1070944 1072725 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dar:Daro_0706 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein 1070944..1072725 Methylovorus glucosetrophus SIP3-4 8173188 YP_003050790.1 CDS Msip34_1016 NC_012969.1 1073132 1073629 R hypothetical protein complement(1073132..1073629) Methylovorus glucosetrophus SIP3-4 8173190 YP_003050791.1 CDS Msip34_1017 NC_012969.1 1074499 1075863 D KEGG: similar to cryptochrome dash; TIGRFAM: cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; DASH family cryptochrome 1074499..1075863 Methylovorus glucosetrophus SIP3-4 8173191 YP_003050792.1 CDS Msip34_1018 NC_012969.1 1075860 1077431 D PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: cvi:CV_3229 hypothetical protein; deoxyribodipyrimidine photolyase-like protein 1075860..1077431 Methylovorus glucosetrophus SIP3-4 8173192 YP_003050793.1 CDS Msip34_1019 NC_012969.1 1077537 1077800 D PFAM: Excinuclease ABC C subunit domain protein; KEGG: xac:XAC3202 GIY-YIG nuclease superfamily protein; excinuclease ABC C subunit domain-containing protein 1077537..1077800 Methylovorus glucosetrophus SIP3-4 8173193 YP_003050794.1 CDS Msip34_1020 NC_012969.1 1077952 1078176 D KEGG: oan:Oant_4301 hypothetical protein; hypothetical protein 1077952..1078176 Methylovorus glucosetrophus SIP3-4 8173194 YP_003050795.1 CDS Msip34_1021 NC_012969.1 1078346 1079026 R PFAM: protein of unknown function DUF1555; KEGG: lch:Lcho_2324 hypothetical protein; hypothetical protein complement(1078346..1079026) Methylovorus glucosetrophus SIP3-4 8173195 YP_003050796.1 CDS Msip34_1022 NC_012969.1 1079100 1081094 R PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: mca:MCA2187 alkaline phosphatase family protein; alkaline phosphatase complement(1079100..1081094) Methylovorus glucosetrophus SIP3-4 8173196 YP_003050797.1 CDS Msip34_1023 NC_012969.1 1081191 1081784 R KEGG: mca:MCA2188 hypothetical protein; hypothetical protein complement(1081191..1081784) Methylovorus glucosetrophus SIP3-4 8173197 YP_003050798.1 CDS Msip34_1024 NC_012969.1 1081992 1082477 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: nmu:Nmul_A2590 general secretion pathway protein G; general secretion pathway protein G 1081992..1082477 Methylovorus glucosetrophus SIP3-4 8173198 YP_003050799.1 CDS Msip34_1025 NC_012969.1 1082480 1083667 D PFAM: type II secretion system protein; KEGG: tbd:Tbd_1294 type II secretion system protein F; type II secretion system protein 1082480..1083667 Methylovorus glucosetrophus SIP3-4 8173199 YP_003050800.1 CDS Msip34_1026 NC_012969.1 1083664 1085343 D PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein; type II secretion system protein E 1083664..1085343 Methylovorus glucosetrophus SIP3-4 8173200 YP_003050801.1 CDS Msip34_1027 NC_012969.1 1085498 1086256 D KEGG: avn:Avin_29140 hypothetical protein; hypothetical protein 1085498..1086256 Methylovorus glucosetrophus SIP3-4 8173201 YP_003050802.1 CDS Msip34_1028 NC_012969.1 1086258 1086824 D KEGG: ppg:PputGB1_2456 hypothetical protein; hypothetical protein 1086258..1086824 Methylovorus glucosetrophus SIP3-4 8173202 YP_003050803.1 CDS Msip34_1029 NC_012969.1 1086821 1087372 D KEGG: net:Neut_0511 putative transmembrane protein; hypothetical protein 1086821..1087372 Methylovorus glucosetrophus SIP3-4 8173203 YP_003050804.1 CDS Msip34_1030 NC_012969.1 1087369 1087971 D KEGG: mfa:Mfla_2415 putative prolin-rich transmembrane protein; putative prolin-rich transmembrane protein 1087369..1087971 Methylovorus glucosetrophus SIP3-4 8173204 YP_003050805.1 CDS Msip34_1031 NC_012969.1 1087988 1090015 D PFAM: type II and III secretion system protein; NolW domain protein; KEGG: mfa:Mfla_2414 type II and III secretion system protein; type II and III secretion system protein 1087988..1090015 Methylovorus glucosetrophus SIP3-4 8173205 YP_003050806.1 CDS Msip34_1032 NC_012969.1 1090012 1090485 D KEGG: mfa:Mfla_2413 methylation; methylation protein 1090012..1090485 Methylovorus glucosetrophus SIP3-4 8173206 YP_003050807.1 CDS Msip34_1033 NC_012969.1 1090460 1090894 D PFAM: type II secretion system protein G; KEGG: mfa:Mfla_2412 methylation; type II secretion system protein G 1090460..1090894 Methylovorus glucosetrophus SIP3-4 8173207 YP_003050808.1 CDS Msip34_1034 NC_012969.1 1090881 1091417 D KEGG: mfa:Mfla_2411 hypothetical protein; hypothetical protein 1090881..1091417 Methylovorus glucosetrophus SIP3-4 8173208 YP_003050809.1 CDS Msip34_1035 NC_012969.1 1091420 1092142 R PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2410 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit complement(1091420..1092142) Methylovorus glucosetrophus SIP3-4 8173209 YP_003050810.1 CDS Msip34_1036 NC_012969.1 1092330 1092689 D KEGG: mfa:Mfla_2375 hypothetical protein; hypothetical protein 1092330..1092689 Methylovorus glucosetrophus SIP3-4 8173210 YP_003050811.1 CDS Msip34_1037 NC_012969.1 1092756 1092983 R KEGG: smt:Smal_2462 hypothetical protein; hypothetical protein complement(1092756..1092983) Methylovorus glucosetrophus SIP3-4 8173211 YP_003050812.1 CDS Msip34_1038 NC_012969.1 1093020 1093586 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1186 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(1093020..1093586) Methylovorus glucosetrophus SIP3-4 8173212 YP_003050813.1 CDS Msip34_1039 NC_012969.1 1093838 1094206 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1625 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 1093838..1094206 Methylovorus glucosetrophus SIP3-4 8173214 YP_003050814.1 CDS Msip34_1040 NC_012969.1 1094299 1095660 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mpt:Mpe_A2526 CHR transporter; chromate transporter 1094299..1095660 Methylovorus glucosetrophus SIP3-4 8173215 YP_003050815.1 CDS Msip34_1041 NC_012969.1 1095791 1096318 D KEGG: mfa:Mfla_0366 hypothetical protein; hypothetical protein 1095791..1096318 Methylovorus glucosetrophus SIP3-4 8173216 YP_003050816.1 CDS Msip34_1042 NC_012969.1 1096471 1097253 D PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1203 hypothetical protein; hypothetical protein 1096471..1097253 Methylovorus glucosetrophus SIP3-4 8173217 YP_003050817.1 CDS Msip34_1043 NC_012969.1 1097353 1097631 R KEGG: transmembrane protein; transmembrane protein complement(1097353..1097631) Methylovorus glucosetrophus SIP3-4 8173218 YP_003050818.1 CDS Msip34_1044 NC_012969.1 1097909 1098310 D hypothetical protein 1097909..1098310 Methylovorus glucosetrophus SIP3-4 8173219 YP_003050819.1 CDS Msip34_1045 NC_012969.1 1098412 1098714 D PFAM: Domain of unknown function DUF1840; KEGG: mfa:Mfla_1227 hypothetical protein; hypothetical protein 1098412..1098714 Methylovorus glucosetrophus SIP3-4 8173220 YP_003050820.1 CDS Msip34_1046 NC_012969.1 1098907 1100607 D PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1260 TPR repeat-containing protein; hypothetical protein 1098907..1100607 Methylovorus glucosetrophus SIP3-4 8172384 YP_003050821.1 CDS Msip34_1047 NC_012969.1 1100675 1100851 R KEGG: mfa:Mfla_1228 hypothetical protein; hypothetical protein complement(1100675..1100851) Methylovorus glucosetrophus SIP3-4 8172385 YP_003050822.1 CDS Msip34_1048 NC_012969.1 1101193 1103496 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: azo:azo0607 putative TonB-dependent receptor; TonB-dependent siderophore receptor 1101193..1103496 Methylovorus glucosetrophus SIP3-4 8172386 YP_003050823.1 CDS Msip34_1049 NC_012969.1 1103567 1104247 D PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: xca:xccb100_1388 putative hydroxylase; 2OG-Fe(II) oxygenase 1103567..1104247 Methylovorus glucosetrophus SIP3-4 8172387 YP_003050824.1 CDS Msip34_1050 NC_012969.1 1104262 1104534 D KEGG: rso:RSc2353 signal peptide protein; signal peptide protein 1104262..1104534 Methylovorus glucosetrophus SIP3-4 8172388 YP_003050825.1 CDS Msip34_1051 NC_012969.1 1104537 1105040 D PFAM: cytochrome B561; KEGG: rso:RSc2354 putative transmembrane hydrogenase cytochrome b-type subunit; cytochrome B561 1104537..1105040 Methylovorus glucosetrophus SIP3-4 8172389 YP_003050826.1 CDS Msip34_1052 NC_012969.1 1105041 1105820 D PFAM: PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_B0220 hypothetical protein; PepSY-associated TM helix domain-containing protein 1105041..1105820 Methylovorus glucosetrophus SIP3-4 8172390 YP_003050827.1 CDS Msip34_1053 NC_012969.1 1106036 1108138 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nmu:Nmul_A1260 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1106036..1108138 Methylovorus glucosetrophus SIP3-4 8172391 YP_003050828.1 CDS Msip34_1054 NC_012969.1 1108236 1110143 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1199 ABC transporter related; ABC transporter-like protein complement(1108236..1110143) Methylovorus glucosetrophus SIP3-4 8172392 YP_003050829.1 CDS Msip34_1055 NC_012969.1 1110177 1112240 R PFAM: AsmA family protein; KEGG: mfa:Mfla_1200 AsmA; AsmA family protein complement(1110177..1112240) Methylovorus glucosetrophus SIP3-4 8172393 YP_003050830.1 CDS Msip34_1056 NC_012969.1 1112440 1113141 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bmn:BMA10247_0371 DNA-binding response regulator KdpE; winged helix family two component transcriptional regulator complement(1112440..1113141) Methylovorus glucosetrophus SIP3-4 8172394 YP_003050831.1 CDS Msip34_1057 NC_012969.1 1113138 1115858 R PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cvi:CV_1596 two-component regulatory protein sensor kinase; osmosensitive K channel His kinase sensor complement(1113138..1115858) Methylovorus glucosetrophus SIP3-4 8172395 YP_003050832.1 CDS Msip34_1058 NC_012969.1 1115958 1116545 R KEGG: bvi:Bcep1808_2371 potassium-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase C complement(1115958..1116545) Methylovorus glucosetrophus SIP3-4 8172396 YP_003050833.1 CDS Msip34_1059 NC_012969.1 1116584 1118659 R TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cvi:CV_1598 potassium-transporting ATPase B chain; K+-transporting ATPase subunit B complement(1116584..1118659) Methylovorus glucosetrophus SIP3-4 8172397 YP_003050834.1 CDS Msip34_1060 NC_012969.1 1118698 1120506 R KEGG: cvi:CV_1599 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase A complement(1118698..1120506) Methylovorus glucosetrophus SIP3-4 8172398 YP_003050835.1 CDS Msip34_1061 NC_012969.1 1120592 1120693 R hypothetical protein complement(1120592..1120693) Methylovorus glucosetrophus SIP3-4 8172399 YP_003050836.1 CDS Msip34_1062 NC_012969.1 1120875 1122011 R PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1201 major facilitator transporter; major facilitator superfamily protein complement(1120875..1122011) Methylovorus glucosetrophus SIP3-4 8172400 YP_003050837.1 CDS Msip34_1063 NC_012969.1 1122141 1124138 R PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_1202 ATP-dependent DNA helicase Rep; UvrD/REP helicase complement(1122141..1124138) Methylovorus glucosetrophus SIP3-4 8172401 YP_003050838.1 CDS Msip34_1064 NC_012969.1 1124331 1125527 D KEGG: maq:Maqu_3846 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1124331..1125527 Methylovorus glucosetrophus SIP3-4 8172402 YP_003050839.1 CDS Msip34_1065 NC_012969.1 1125558 1126007 D PFAM: MEKHLA domain protein; KEGG: bpr:GBP346_A2162 mekhla domain protein; MEKHLA domain-containing protein 1125558..1126007 Methylovorus glucosetrophus SIP3-4 8172403 YP_003050840.1 CDS Msip34_1066 NC_012969.1 1126164 1127324 D KEGG: tau:Tola_1998 diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1126164..1127324 Methylovorus glucosetrophus SIP3-4 8172404 YP_003050841.1 CDS Msip34_1067 NC_012969.1 1127359 1128315 R PFAM: GTP-binding protein HSR1-related; KEGG: mfa:Mfla_1204 GTP-binding; GTP-binding protein HSR1-like complement(1127359..1128315) Methylovorus glucosetrophus SIP3-4 8172405 YP_003050842.1 CDS Msip34_1068 NC_012969.1 1128389 1128817 R KEGG: tbd:Tbd_0707 transmembrane protein; transmembrane protein complement(1128389..1128817) Methylovorus glucosetrophus SIP3-4 8172406 YP_003050843.1 CDS Msip34_1069 NC_012969.1 1128818 1129657 R PFAM: ApbE family lipoprotein; KEGG: rso:RSc0611 thiamine biosynthesis lipoprotein ApbE precursor transmembrane; ApbE family lipoprotein complement(1128818..1129657) Methylovorus glucosetrophus SIP3-4 8172407 YP_003050844.1 CDS Msip34_1070 NC_012969.1 1129632 1130174 R PFAM: FMN-binding domain protein; KEGG: tbd:Tbd_0709 putative signal peptide protein; FMN-binding domain-containing protein complement(1129632..1130174) Methylovorus glucosetrophus SIP3-4 8172408 YP_003050845.1 CDS Msip34_1071 NC_012969.1 1130253 1131134 R KEGG: pnu:Pnuc_0361 hypothetical protein; hypothetical protein complement(1130253..1131134) Methylovorus glucosetrophus SIP3-4 8172409 YP_003050846.1 CDS Msip34_1072 NC_012969.1 1131355 1132185 D KEGG: mfa:Mfla_1208 hypothetical protein; hypothetical protein 1131355..1132185 Methylovorus glucosetrophus SIP3-4 8172410 YP_003050847.1 CDS Msip34_1073 NC_012969.1 1132182 1133111 R PFAM: ribonuclease BN; KEGG: mfa:Mfla_1209 ribonuclease BN; ribonuclease BN complement(1132182..1133111) Methylovorus glucosetrophus SIP3-4 8172411 YP_003050848.1 CDS Msip34_1074 NC_012969.1 1133290 1133733 D KEGG: azo:azo2559 hypothetical protein; hypothetical protein 1133290..1133733 Methylovorus glucosetrophus SIP3-4 8172412 YP_003050849.1 CDS Msip34_1075 NC_012969.1 1133842 1139577 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: aav:Aave_1953 alpha-2-macroglobulin domain-containing protein; alpha-2-macroglobulin domain-containing protein 1133842..1139577 Methylovorus glucosetrophus SIP3-4 8172413 YP_003050850.1 CDS Msip34_1076 NC_012969.1 1139584 1141953 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bph:Bphy_0941 penicillin-binding protein 1C; penicillin-binding protein 1C 1139584..1141953 Methylovorus glucosetrophus SIP3-4 8172414 YP_003050851.1 CDS Msip34_1077 NC_012969.1 1141996 1146045 D KEGG: mfa:Mfla_1212 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; AAA ATPase; ATP-dependent helicase HrpA 1141996..1146045 Methylovorus glucosetrophus SIP3-4 8172415 YP_003050852.1 CDS Msip34_1078 NC_012969.1 1146269 1146772 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2581 MarR family transcriptional regulator; MarR family transcriptional regulator 1146269..1146772 Methylovorus glucosetrophus SIP3-4 8172416 YP_003050853.1 CDS Msip34_1079 NC_012969.1 1146844 1148415 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_2582 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 1146844..1148415 Methylovorus glucosetrophus SIP3-4 8172417 YP_003050854.1 CDS Msip34_1080 NC_012969.1 1148412 1150682 D PFAM: Fusaric acid resistance protein conserved region; KEGG: mfa:Mfla_2583 fusaric acid resistance protein region; fusaric acid resistance protein 1148412..1150682 Methylovorus glucosetrophus SIP3-4 8172418 YP_003050855.1 CDS Msip34_1081 NC_012969.1 1150685 1150885 D PFAM: protein of unknown function DUF1656; KEGG: mfa:Mfla_2584 hypothetical protein; hypothetical protein 1150685..1150885 Methylovorus glucosetrophus SIP3-4 8172419 YP_003050856.1 CDS Msip34_1082 NC_012969.1 1150962 1151906 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_2585 secretion protein HlyD; RND family efflux transporter MFP subunit 1150962..1151906 Methylovorus glucosetrophus SIP3-4 8172420 YP_003050857.1 CDS Msip34_1083 NC_012969.1 1152000 1152281 R KEGG: mms:mma_1285 hypothetical protein; hypothetical protein complement(1152000..1152281) Methylovorus glucosetrophus SIP3-4 8172421 YP_003050858.1 CDS Msip34_1084 NC_012969.1 1152420 1153331 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B4244 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1152420..1153331) Methylovorus glucosetrophus SIP3-4 8172422 YP_003050859.1 CDS Msip34_1085 NC_012969.1 1153430 1155730 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1153430..1155730 Methylovorus glucosetrophus SIP3-4 8172423 YP_003050860.1 CDS Msip34_1086 NC_012969.1 1155819 1156766 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ppd:Ppro_1339 hypothetical protein; hypothetical protein complement(1155819..1156766) Methylovorus glucosetrophus SIP3-4 8172424 YP_003050861.1 CDS Msip34_1087 NC_012969.1 1157306 1160119 D KEGG: tbd:Tbd_1976 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 1157306..1160119 Methylovorus glucosetrophus SIP3-4 8172425 YP_003050862.1 CDS Msip34_1088 NC_012969.1 1160218 1161369 D PFAM: ribonucleotide reductase; KEGG: tbd:Tbd_1975 ribonucleotide-diphosphate reductase subunit beta; ribonucleoside-diphosphate reductase 1160218..1161369 Methylovorus glucosetrophus SIP3-4 8172426 YP_003050863.1 CDS Msip34_1089 NC_012969.1 1161505 1163853 D KEGG: afr:AFE_0683 type I restriction-modification system, R subunit; PFAM: EcoEI R domain protein; protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; Type I site-specific deoxyribonuclease 1161505..1163853 Methylovorus glucosetrophus SIP3-4 8172427 YP_003050864.1 CDS Msip34_1090 NC_012969.1 1163871 1165364 D PFAM: N-6 DNA methylase; KEGG: afr:AFE_0684 type I restriction-modification system, M subunit; adenine-specific DNA-methyltransferase 1163871..1165364 Methylovorus glucosetrophus SIP3-4 8172428 YP_003050865.1 CDS Msip34_1091 NC_012969.1 1165367 1167754 D PFAM: restriction modification system DNA specificity domain; KEGG: bpt:Bpet3989 type I restriction-modification system, S subunit; restriction modification system DNA specificity domain-containing protein 1165367..1167754 Methylovorus glucosetrophus SIP3-4 8172429 YP_003050866.1 CDS dcd NC_012969.1 1167864 1168433 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1167864..1168433) Methylovorus glucosetrophus SIP3-4 8172430 YP_003050867.1 CDS Msip34_1093 NC_012969.1 1168494 1169972 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1168494..1169972) Methylovorus glucosetrophus SIP3-4 8172431 YP_003050868.1 CDS Msip34_1094 NC_012969.1 1170127 1171038 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(1170127..1171038) Methylovorus glucosetrophus SIP3-4 8172432 YP_003050869.1 CDS Msip34_1095 NC_012969.1 1171156 1171869 D TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mfa:Mfla_1063 6-phosphogluconolactonase; 6-phosphogluconolactonase 1171156..1171869 Methylovorus glucosetrophus SIP3-4 8172433 YP_003050870.1 CDS Msip34_1096 NC_012969.1 1171946 1172683 R KEGG: bra:BRADO4440 putative 3-demethylubiquinone-9 3-O-methyltransferase; putative 3-demethylubiquinone-9 3-O-methyltransferase complement(1171946..1172683) Methylovorus glucosetrophus SIP3-4 8172434 YP_003050871.1 CDS Msip34_1097 NC_012969.1 1172700 1173788 R PFAM: protein of unknown function DUF59; KEGG: mfa:Mfla_1064 hypothetical protein; hypothetical protein complement(1172700..1173788) Methylovorus glucosetrophus SIP3-4 8172435 YP_003050872.1 CDS metG NC_012969.1 1173922 1175958 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1173922..1175958 Methylovorus glucosetrophus SIP3-4 8172436 YP_003050873.1 CDS Msip34_1099 NC_012969.1 1176061 1176360 R KEGG: mfa:Mfla_1066 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; competence protein ComEA complement(1176061..1176360) Methylovorus glucosetrophus SIP3-4 8172437 YP_003050874.1 CDS Msip34_1100 NC_012969.1 1176448 1177164 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(1176448..1177164) Methylovorus glucosetrophus SIP3-4 8172438 YP_003050875.1 CDS Msip34_1101 NC_012969.1 1177165 1178328 R KEGG: mfa:Mfla_1068 tetratricopeptide repeat protein; hypothetical protein complement(1177165..1178328) Methylovorus glucosetrophus SIP3-4 8172439 YP_003050876.1 CDS Msip34_1102 NC_012969.1 1178333 1178602 R KEGG: mfa:Mfla_1069 hypothetical protein; hypothetical protein complement(1178333..1178602) Methylovorus glucosetrophus SIP3-4 8172440 YP_003050877.1 CDS Msip34_1103 NC_012969.1 1178742 1179026 R KEGG: mfa:Mfla_1070 integration host factor, beta subunit; TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; integration host factor subunit beta complement(1178742..1179026) Methylovorus glucosetrophus SIP3-4 8172441 YP_003050878.1 CDS rpsA NC_012969.1 1179039 1180817 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1179039..1180817) Methylovorus glucosetrophus SIP3-4 8172442 YP_003050879.1 CDS Msip34_1105 NC_012969.1 1180852 1181529 R TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: mfa:Mfla_1072 cytidylate kinase; cytidylate kinase complement(1180852..1181529) Methylovorus glucosetrophus SIP3-4 8172443 YP_003050880.1 CDS Msip34_1106 NC_012969.1 1181632 1181838 D KEGG: sse:Ssed_4479 hypothetical protein; hypothetical protein 1181632..1181838 Methylovorus glucosetrophus SIP3-4 8172444 YP_003050881.1 CDS Msip34_1107 NC_012969.1 1181862 1183160 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1181862..1183160) Methylovorus glucosetrophus SIP3-4 8172445 YP_003050882.1 CDS Msip34_1108 NC_012969.1 1183171 1184037 R PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_1074 prephenate dehydrogenase; prephenate dehydrogenase complement(1183171..1184037) Methylovorus glucosetrophus SIP3-4 8172446 YP_003050883.1 CDS Msip34_1109 NC_012969.1 1184221 1184964 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1184221..1184964) Methylovorus glucosetrophus SIP3-4 8172447 YP_003050884.1 CDS aat NC_012969.1 1184951 1185646 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1184951..1185646) Methylovorus glucosetrophus SIP3-4 8172448 YP_003050885.1 CDS Msip34_1111 NC_012969.1 1185704 1187785 R KEGG: dar:Daro_3990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(1185704..1187785) Methylovorus glucosetrophus SIP3-4 8172449 YP_003050886.1 CDS Msip34_1112 NC_012969.1 1187940 1189595 D KEGG: vvy:VV2671 GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; SMART: GGDEF domain containing protein; 7TM domain sensor diguanylate cyclase 1187940..1189595 Methylovorus glucosetrophus SIP3-4 8172450 YP_003050887.1 CDS Msip34_1113 NC_012969.1 1189683 1190828 D KEGG: vvu:VV1_1734 small-conductance mechanosensitive channel; small-conductance mechanosensitive channel 1189683..1190828 Methylovorus glucosetrophus SIP3-4 8172451 YP_003050888.1 CDS Msip34_1114 NC_012969.1 1190908 1191516 R PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1190908..1191516) Methylovorus glucosetrophus SIP3-4 8172452 YP_003050889.1 CDS Msip34_1115 NC_012969.1 1191720 1192625 D PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll1328 hypothetical protein; alpha/beta hydrolase fold protein 1191720..1192625 Methylovorus glucosetrophus SIP3-4 8172453 YP_003050890.1 CDS Msip34_1116 NC_012969.1 1192744 1193991 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pca:Pcar_0428 OMPP1/FadL/TodX family toluene transport protein; aromatic hydrocarbon degradation membrane protein complement(1192744..1193991) Methylovorus glucosetrophus SIP3-4 8172454 YP_003050891.1 CDS Msip34_1117 NC_012969.1 1194112 1196286 D PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mfa:Mfla_1083 radical SAM family protein; radical SAM protein 1194112..1196286 Methylovorus glucosetrophus SIP3-4 8172455 YP_003050892.1 CDS Msip34_1118 NC_012969.1 1196431 1197297 D PFAM: GumN family protein; KEGG: mfa:Mfla_1084 hypothetical protein; GumN family protein 1196431..1197297 Methylovorus glucosetrophus SIP3-4 8172456 YP_003050893.1 CDS Msip34_1119 NC_012969.1 1197307 1197801 R KEGG: har:HEAR3387 hypothetical protein; hypothetical protein complement(1197307..1197801) Methylovorus glucosetrophus SIP3-4 8172457 YP_003050894.1 CDS Msip34_1120 NC_012969.1 1197858 1198172 R PFAM: small multidrug resistance protein; KEGG: smt:Smal_3713 small multidrug resistance protein; small multidrug resistance protein complement(1197858..1198172) Methylovorus glucosetrophus SIP3-4 8172458 YP_003050895.1 CDS Msip34_1121 NC_012969.1 1198293 1198793 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1088 response regulator receiver domain-containing protein; response regulator receiver protein complement(1198293..1198793) Methylovorus glucosetrophus SIP3-4 8172459 YP_003050896.1 CDS Msip34_1122 NC_012969.1 1198858 1199490 R PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(1198858..1199490) Methylovorus glucosetrophus SIP3-4 8172460 YP_003050897.1 CDS Msip34_1123 NC_012969.1 1199520 1200086 R PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: bpt:Bpet4722 bacterioferritin; ferritin Dps family protein complement(1199520..1200086) Methylovorus glucosetrophus SIP3-4 8172461 YP_003050898.1 CDS Msip34_1124 NC_012969.1 1200137 1200559 R PFAM: protein of unknown function DUF883 ElaB; KEGG: mfa:Mfla_1090 hypothetical protein; hypothetical protein complement(1200137..1200559) Methylovorus glucosetrophus SIP3-4 8172462 YP_003050899.1 CDS Msip34_1125 NC_012969.1 1200600 1200761 R PFAM: protein of unknown function DUF1328; KEGG: bpy:Bphyt_2658 protein of unknown function DUF1328; hypothetical protein complement(1200600..1200761) Methylovorus glucosetrophus SIP3-4 8172463 YP_003050900.1 CDS Msip34_1126 NC_012969.1 1200872 1202284 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1092 periplasmic sensor signal transduction histidine kinase; histidine kinase 1200872..1202284 Methylovorus glucosetrophus SIP3-4 8173685 YP_003050901.1 CDS Msip34_1127 NC_012969.1 1202478 1202993 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated; transporter 1202478..1202993 Methylovorus glucosetrophus SIP3-4 8171820 YP_003050902.1 CDS Msip34_1128 NC_012969.1 1202997 1203230 D PFAM: transport-associated; KEGG: mfa:Mfla_1094 transport-associated; transporter 1202997..1203230 Methylovorus glucosetrophus SIP3-4 8171821 YP_003050903.1 CDS Msip34_1129 NC_012969.1 1203249 1203500 D hypothetical protein 1203249..1203500 Methylovorus glucosetrophus SIP3-4 8171822 YP_003050904.1 CDS Msip34_1130 NC_012969.1 1203792 1204133 D PFAM: transport-associated; KEGG: nmu:Nmul_A1193 transport-associated protein; transporter 1203792..1204133 Methylovorus glucosetrophus SIP3-4 8171823 YP_003050905.1 CDS Msip34_1131 NC_012969.1 1204330 1204608 D hypothetical protein 1204330..1204608 Methylovorus glucosetrophus SIP3-4 8171824 YP_003050906.1 CDS Msip34_1132 NC_012969.1 1204799 1205305 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated; transporter 1204799..1205305 Methylovorus glucosetrophus SIP3-4 8171825 YP_003050907.1 CDS Msip34_1133 NC_012969.1 1205380 1205919 R PFAM: Lipocalin family protein; KEGG: mfa:Mfla_1095 lipocalin-like protein; lipocalin family protein complement(1205380..1205919) Methylovorus glucosetrophus SIP3-4 8171826 YP_003050908.1 CDS Msip34_1134 NC_012969.1 1205921 1206394 R PFAM: protein of unknown function DUF188; KEGG: mfa:Mfla_1096 hypothetical protein; hypothetical protein complement(1205921..1206394) Methylovorus glucosetrophus SIP3-4 8171827 YP_003050909.1 CDS Msip34_1135 NC_012969.1 1206391 1208007 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1098 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase complement(1206391..1208007) Methylovorus glucosetrophus SIP3-4 8171828 YP_003050910.1 CDS Msip34_1136 NC_012969.1 1208178 1208891 R PFAM: pseudouridine synthase; KEGG: mfa:Mfla_1099 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase complement(1208178..1208891) Methylovorus glucosetrophus SIP3-4 8171829 YP_003050911.1 CDS Msip34_1137 NC_012969.1 1208971 1209525 R KEGG: mfa:Mfla_1100 hypothetical protein; hypothetical protein complement(1208971..1209525) Methylovorus glucosetrophus SIP3-4 8171830 YP_003050912.1 CDS Msip34_1138 NC_012969.1 1209610 1210287 R KEGG: mfa:Mfla_1106 ribose-5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase complement(1209610..1210287) Methylovorus glucosetrophus SIP3-4 8171831 YP_003050913.1 CDS Msip34_1139 NC_012969.1 1210336 1211325 R with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK complement(1210336..1211325) Methylovorus glucosetrophus SIP3-4 8171832 YP_003050914.1 CDS Msip34_1140 NC_012969.1 1211378 1212136 R TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: mfa:Mfla_1105 dihydroxyacetone kinase, subunit L; dihydroxyacetone kinase subunit DhaL complement(1211378..1212136) Methylovorus glucosetrophus SIP3-4 8171833 YP_003050915.1 CDS Msip34_1141 NC_012969.1 1212220 1213002 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_1107 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1212220..1213002 Methylovorus glucosetrophus SIP3-4 8171834 YP_003050916.1 CDS Msip34_1142 NC_012969.1 1213049 1213606 R KEGG: mpt:Mpe_A1383 hypothetical protein; hypothetical protein complement(1213049..1213606) Methylovorus glucosetrophus SIP3-4 8171835 YP_003050917.1 CDS Msip34_1143 NC_012969.1 1213685 1214578 R PFAM: Hsp33 protein; KEGG: mfa:Mfla_1108 HSP33 protein; Hsp33 protein complement(1213685..1214578) Methylovorus glucosetrophus SIP3-4 8171836 YP_003050918.1 CDS Msip34_1144 NC_012969.1 1214647 1215540 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(1214647..1215540) Methylovorus glucosetrophus SIP3-4 8171837 YP_003050919.1 CDS Msip34_1145 NC_012969.1 1215553 1215864 R KEGG: mfa:Mfla_1110 hypothetical protein; hypothetical protein complement(1215553..1215864) Methylovorus glucosetrophus SIP3-4 8171838 YP_003050920.1 CDS Msip34_1146 NC_012969.1 1216193 1216846 D KEGG: mfa:Mfla_1112 hypothetical protein; hypothetical protein 1216193..1216846 Methylovorus glucosetrophus SIP3-4 8171839 YP_003050921.1 CDS Msip34_1147 NC_012969.1 1216900 1218408 R PFAM: protein of unknown function DUF344; KEGG: mfa:Mfla_1113 polyphosphate:AMP phosphotransferase; hypothetical protein complement(1216900..1218408) Methylovorus glucosetrophus SIP3-4 8171840 YP_003050922.1 CDS Msip34_1148 NC_012969.1 1218523 1219605 R KEGG: pfs:PFLU2975 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; AraC family transcriptional regulator complement(1218523..1219605) Methylovorus glucosetrophus SIP3-4 8171841 YP_003050923.1 CDS Msip34_1149 NC_012969.1 1219828 1220151 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: net:Neut_2264 transcriptional regulator, ArsR family protein; ArsR family transcriptional regulator 1219828..1220151 Methylovorus glucosetrophus SIP3-4 8171842 YP_003050924.1 CDS Msip34_1150 NC_012969.1 1220154 1220639 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mca:MCA2265 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 1220154..1220639 Methylovorus glucosetrophus SIP3-4 8171843 YP_003050925.1 CDS Msip34_1151 NC_012969.1 1220659 1221171 D PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: net:Neut_2262 protein tyrosine phosphatase; protein-tyrosine phosphatase 1220659..1221171 Methylovorus glucosetrophus SIP3-4 8171844 YP_003050926.1 CDS Msip34_1152 NC_012969.1 1221168 1222190 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmj:BMULJ_00925 ACR3 family arsenite transporter; arsenical-resistance protein 1221168..1222190 Methylovorus glucosetrophus SIP3-4 8171845 YP_003050927.1 CDS Msip34_1153 NC_012969.1 1222408 1223616 D PFAM: Rh family protein/ammonium transporter; KEGG: tbd:Tbd_1701 putative ammonium transporter; Rh family protein/ammonium transporter 1222408..1223616 Methylovorus glucosetrophus SIP3-4 8171846 YP_003050928.1 CDS Msip34_1154 NC_012969.1 1223809 1224297 D KEGG: mfa:Mfla_0717 hypothetical protein; hypothetical protein 1223809..1224297 Methylovorus glucosetrophus SIP3-4 8171847 YP_003050929.1 CDS Msip34_1155 NC_012969.1 1224572 1224676 D hypothetical protein 1224572..1224676 Methylovorus glucosetrophus SIP3-4 8171848 YP_003050930.1 CDS Msip34_1156 NC_012969.1 1224673 1225878 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_0331 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 1224673..1225878 Methylovorus glucosetrophus SIP3-4 8171849 YP_003050931.1 CDS Msip34_1157 NC_012969.1 1225887 1229009 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: psb:Psyr_2865 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1225887..1229009 Methylovorus glucosetrophus SIP3-4 8171850 YP_003050932.1 CDS Msip34_1158 NC_012969.1 1229006 1230457 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: azo:azo0246 outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 1229006..1230457 Methylovorus glucosetrophus SIP3-4 8171851 YP_003050933.1 CDS Msip34_1159 NC_012969.1 1230634 1231362 D PFAM: protein of unknown function DUF1275; KEGG: rso:RSc0238 putative permease transmembrane protein; hypothetical protein 1230634..1231362 Methylovorus glucosetrophus SIP3-4 8171852 YP_003050934.1 CDS Msip34_1160 NC_012969.1 1231452 1231919 R KEGG: elf:LF82_3563 uncharacterized protein YneG; hypothetical protein complement(1231452..1231919) Methylovorus glucosetrophus SIP3-4 8171853 YP_003050935.1 CDS Msip34_1161 NC_012969.1 1232738 1234537 D PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor extracellular region 2; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_2537 periplasmic sensor signal transduction histidine kinase; histidine kinase 1232738..1234537 Methylovorus glucosetrophus SIP3-4 8171855 YP_003050936.1 CDS Msip34_1162 NC_012969.1 1234522 1235217 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_2538 two component transcriptional regulator; winged helix family two component transcriptional regulator 1234522..1235217 Methylovorus glucosetrophus SIP3-4 8171856 YP_003050937.1 CDS Msip34_1163 NC_012969.1 1235379 1237049 D TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: mms:mma_0520 autotransporter; outer membrane autotransporter barrel domain-containing protein 1235379..1237049 Methylovorus glucosetrophus SIP3-4 8171857 YP_003050938.1 CDS Msip34_1164 NC_012969.1 1237319 1238611 R PFAM: UMUC domain protein DNA-repair protein; KEGG: ece:Z1947 DNA polymerase V subunit UmuC; DNA-directed DNA polymerase complement(1237319..1238611) Methylovorus glucosetrophus SIP3-4 8171858 YP_003050939.1 CDS Msip34_1165 NC_012969.1 1238589 1239026 R PFAM: peptidase S24 and S26 domain protein; KEGG: lpc:LPC_1133 SOS (error prone) mutagenesis protein UmuD (RumA); peptidase S24 and S26 domain-containing protein complement(1238589..1239026) Methylovorus glucosetrophus SIP3-4 8171859 YP_003050940.1 CDS Msip34_1166 NC_012969.1 1239117 1239689 D PFAM: methyladenine glycosylase; KEGG: xcv:XCV2171 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 1239117..1239689 Methylovorus glucosetrophus SIP3-4 8171860 YP_003050941.1 CDS Msip34_1167 NC_012969.1 1240037 1242565 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: glo:Glov_1735 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1240037..1242565 Methylovorus glucosetrophus SIP3-4 8171861 YP_003050942.1 CDS Msip34_1168 NC_012969.1 1242623 1243084 R KEGG: ppr:PBPRB0840 hypothetical protein; hypothetical protein complement(1242623..1243084) Methylovorus glucosetrophus SIP3-4 8171862 YP_003050943.1 CDS Msip34_1169 NC_012969.1 1243225 1243620 D KEGG: mfa:Mfla_0711 hypothetical protein; hypothetical protein 1243225..1243620 Methylovorus glucosetrophus SIP3-4 8171863 YP_003050944.1 CDS Msip34_1170 NC_012969.1 1243787 1244113 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: mfa:Mfla_0714 protein of unknown function DUF861, cupin_3; hypothetical protein complement(1243787..1244113) Methylovorus glucosetrophus SIP3-4 8171864 YP_003050945.1 CDS Msip34_1171 NC_012969.1 1244363 1246693 D KEGG: mfa:Mfla_2628 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1244363..1246693 Methylovorus glucosetrophus SIP3-4 8171865 YP_003050946.1 CDS Msip34_1172 NC_012969.1 1246732 1248003 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: tbd:Tbd_2596 long chain fatty acid transport protein; aromatic hydrocarbon degradation membrane protein 1246732..1248003 Methylovorus glucosetrophus SIP3-4 8171866 YP_003050947.1 CDS Msip34_1173 NC_012969.1 1248372 1249544 R catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase complement(1248372..1249544) Methylovorus glucosetrophus SIP3-4 8171867 YP_003050948.1 CDS Msip34_1174 NC_012969.1 1249992 1252601 R KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1249992..1252601) Methylovorus glucosetrophus SIP3-4 8171868 YP_003050949.1 CDS Msip34_1175 NC_012969.1 1252782 1253156 R PFAM: protein of unknown function DUF779; KEGG: mfa:Mfla_1994 hypothetical protein; hypothetical protein complement(1252782..1253156) Methylovorus glucosetrophus SIP3-4 8171869 YP_003050950.1 CDS Msip34_1176 NC_012969.1 1253272 1254792 R PFAM: Aldehyde Dehydrogenase; KEGG: mfa:Mfla_1995 lactaldehyde dehydrogenase; aldehyde dehydrogenase complement(1253272..1254792) Methylovorus glucosetrophus SIP3-4 8171870 YP_003050951.1 CDS Msip34_1177 NC_012969.1 1255205 1255675 D catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 1255205..1255675 Methylovorus glucosetrophus SIP3-4 8171871 YP_003050952.1 CDS Msip34_1178 NC_012969.1 1255675 1257225 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mfa:Mfla_0721 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1255675..1257225 Methylovorus glucosetrophus SIP3-4 8171872 YP_003050953.1 CDS Msip34_1179 NC_012969.1 1257246 1260092 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: mfa:Mfla_0720 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 1257246..1260092 Methylovorus glucosetrophus SIP3-4 8171873 YP_003050954.1 CDS Msip34_1180 NC_012969.1 1260099 1260959 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mfa:Mfla_0719 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 1260099..1260959 Methylovorus glucosetrophus SIP3-4 8171874 YP_003050955.1 CDS Msip34_1181 NC_012969.1 1260956 1261180 D KEGG: rme:Rmet_0557 formate dehydrogenase delta subunit; formate dehydrogenase subunit delta 1260956..1261180 Methylovorus glucosetrophus SIP3-4 8171875 YP_003050956.1 CDS Msip34_1182 NC_012969.1 1261302 1262021 D TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mfa:Mfla_1116 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1261302..1262021 Methylovorus glucosetrophus SIP3-4 8171876 YP_003050957.1 CDS Msip34_1183 NC_012969.1 1262018 1262500 D KEGG: mfa:Mfla_1117 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1262018..1262500 Methylovorus glucosetrophus SIP3-4 8171877 YP_003050958.1 CDS Msip34_1184 NC_012969.1 1262608 1265715 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0345 acriflavin resistance protein:heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(1262608..1265715) Methylovorus glucosetrophus SIP3-4 8171878 YP_003050959.1 CDS Msip34_1185 NC_012969.1 1265728 1266846 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_1177 secretion protein HlyD; RND family efflux transporter MFP subunit complement(1265728..1266846) Methylovorus glucosetrophus SIP3-4 8171879 YP_003050960.1 CDS Msip34_1186 NC_012969.1 1266848 1268134 R PFAM: outer membrane efflux protein; KEGG: dar:Daro_1877 outer membrane efflux protein; outer membrane efflux protein complement(1266848..1268134) Methylovorus glucosetrophus SIP3-4 8171880 YP_003050961.1 CDS Msip34_1187 NC_012969.1 1268340 1268735 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mms:mma_1938 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1268340..1268735) Methylovorus glucosetrophus SIP3-4 8171881 YP_003050962.1 CDS Msip34_1188 NC_012969.1 1268791 1269312 R PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: mfa:Mfla_1118 Smr protein/MutS2; Smr protein/MutS2 complement(1268791..1269312) Methylovorus glucosetrophus SIP3-4 8171882 YP_003050963.1 CDS Msip34_1189 NC_012969.1 1269477 1270427 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mfa:Mfla_1119 thioredoxin reductase; thioredoxin reductase complement(1269477..1270427) Methylovorus glucosetrophus SIP3-4 8171883 YP_003050964.1 CDS Msip34_1190 NC_012969.1 1270482 1270946 R PFAM: Ferritin Dps family protein; KEGG: mfa:Mfla_1120 ferritin and Dps; ferritin Dps family protein complement(1270482..1270946) Methylovorus glucosetrophus SIP3-4 8171884 YP_003050965.1 CDS Msip34_1191 NC_012969.1 1271152 1273491 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mfa:Mfla_1124 DNA translocase FtsK; cell division protein FtsK 1271152..1273491 Methylovorus glucosetrophus SIP3-4 8171885 YP_003050966.1 CDS Msip34_1192 NC_012969.1 1273495 1274124 D TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mfa:Mfla_1125 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1273495..1274124 Methylovorus glucosetrophus SIP3-4 8171886 YP_003050967.1 CDS Msip34_1193 NC_012969.1 1274147 1275469 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1128 recombination factor protein RarA; recombination factor protein RarA 1274147..1275469 Methylovorus glucosetrophus SIP3-4 8171887 YP_003050968.1 CDS Msip34_1194 NC_012969.1 1275503 1276792 D KEGG: mfa:Mfla_1129 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 1275503..1276792 Methylovorus glucosetrophus SIP3-4 8171888 YP_003050969.1 CDS Msip34_1195 NC_012969.1 1276895 1278649 R PFAM: sodium/hydrogen exchanger; KEGG: mfa:Mfla_1130 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(1276895..1278649) Methylovorus glucosetrophus SIP3-4 8171889 YP_003050970.1 CDS Msip34_1196 NC_012969.1 1278672 1280099 R YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase complement(1278672..1280099) Methylovorus glucosetrophus SIP3-4 8171890 YP_003050971.1 CDS Msip34_1198 NC_012969.1 1280889 1281374 D KEGG: cbc:CbuK_0320 transcriptional regulator; XRE family transcriptional regulator 1280889..1281374 Methylovorus glucosetrophus SIP3-4 8171892 YP_003050972.1 CDS Msip34_1199 NC_012969.1 1282108 1283181 R KEGG: avi:Avi_5530 hypothetical protein; hypothetical protein complement(1282108..1283181) Methylovorus glucosetrophus SIP3-4 8171894 YP_003050973.1 CDS Msip34_1200 NC_012969.1 1283186 1284421 R PFAM: Beta-ketoacyl synthase; KEGG: pna:Pnap_2672 beta-ketoacyl synthase; beta-ketoacyl synthase complement(1283186..1284421) Methylovorus glucosetrophus SIP3-4 8171895 YP_003050974.1 CDS Msip34_1201 NC_012969.1 1284427 1284687 R PFAM: phosphopantetheine-binding; KEGG: oan:Oant_2371 phosphopantetheine-binding; phosphopantetheine-binding protein complement(1284427..1284687) Methylovorus glucosetrophus SIP3-4 8171896 YP_003050975.1 CDS Msip34_1202 NC_012969.1 1284704 1285537 R PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_1648 putative esterase; alpha/beta hydrolase fold protein complement(1284704..1285537) Methylovorus glucosetrophus SIP3-4 8171897 YP_003050976.1 CDS Msip34_1203 NC_012969.1 1285609 1286982 R PFAM: aminotransferase class-III; KEGG: pfs:PFLU1128 putative aminotransferase; class III aminotransferase complement(1285609..1286982) Methylovorus glucosetrophus SIP3-4 8171898 YP_003050977.1 CDS Msip34_1204 NC_012969.1 1286994 1287671 R TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: aav:Aave_4326 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase complement(1286994..1287671) Methylovorus glucosetrophus SIP3-4 8171899 YP_003050978.1 CDS Msip34_1205 NC_012969.1 1288063 1288497 D KEGG: mfa:Mfla_1187 hypothetical protein; hypothetical protein 1288063..1288497 Methylovorus glucosetrophus SIP3-4 8171901 YP_003050979.1 CDS Msip34_1206 NC_012969.1 1288533 1289108 R PFAM: electron transport protein SCO1/SenC; KEGG: har:HEAR2909 SCO1/Sen family protein; electron transport protein SCO1/SenC complement(1288533..1289108) Methylovorus glucosetrophus SIP3-4 8171981 YP_003050980.1 CDS Msip34_1207 NC_012969.1 1289134 1290039 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(1289134..1290039) Methylovorus glucosetrophus SIP3-4 8171982 YP_003050981.1 CDS Msip34_1208 NC_012969.1 1290041 1291045 R PFAM: cytochrome oxidase assembly; KEGG: eba:ebA4236 putative cytochrome aa3 oxidase assembly protein,related to CtaA; cytochrome oxidase assembly complement(1290041..1291045) Methylovorus glucosetrophus SIP3-4 8171983 YP_003050982.1 CDS Msip34_1209 NC_012969.1 1291049 1291711 R KEGG: dar:Daro_1464 transmembrane protein; transmembrane protein complement(1291049..1291711) Methylovorus glucosetrophus SIP3-4 8171984 YP_003050983.1 CDS Msip34_1210 NC_012969.1 1291708 1292475 R KEGG: dar:Daro_1465 surfeit locus 1; surfeit locus 1 complement(1291708..1292475) Methylovorus glucosetrophus SIP3-4 8171985 YP_003050984.1 CDS Msip34_1211 NC_012969.1 1292525 1292719 D KEGG: nmu:Nmul_A0188 putative transmembrane protein; hypothetical protein 1292525..1292719 Methylovorus glucosetrophus SIP3-4 8171986 YP_003050985.1 CDS Msip34_1212 NC_012969.1 1292745 1293623 R PFAM: cytochrome c oxidase subunit III; KEGG: dar:Daro_1467 cytochrome c oxidase, subunit III; cytochrome-c oxidase complement(1292745..1293623) Methylovorus glucosetrophus SIP3-4 8171987 YP_003050986.1 CDS Msip34_1213 NC_012969.1 1293719 1294261 R PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dar:Daro_1468 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 complement(1293719..1294261) Methylovorus glucosetrophus SIP3-4 8171988 YP_003050987.1 CDS Msip34_1214 NC_012969.1 1294249 1294386 R hypothetical protein complement(1294249..1294386) Methylovorus glucosetrophus SIP3-4 8171989 YP_003050988.1 CDS Msip34_1215 NC_012969.1 1294390 1295982 R KEGG: dar:Daro_1470 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I complement(1294390..1295982) Methylovorus glucosetrophus SIP3-4 8171990 YP_003050989.1 CDS Msip34_1216 NC_012969.1 1296024 1297193 R TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; KEGG: dar:Daro_1471 cytochrome c oxidase, subunit II:cytochrome c, class I:cytochrome c oxidase subunit II, transmembrane region; cytochrome c oxidase subunit II complement(1296024..1297193) Methylovorus glucosetrophus SIP3-4 8171991 YP_003050990.1 CDS Msip34_1217 NC_012969.1 1297210 1297674 R KEGG: noc:Noc_3048 hypothetical protein; hypothetical protein complement(1297210..1297674) Methylovorus glucosetrophus SIP3-4 8171992 YP_003050991.1 CDS Msip34_1218 NC_012969.1 1297899 1298489 R PFAM: protein of unknown function DUF1282; KEGG: azo:azo1485 hypothetical protein; hypothetical protein complement(1297899..1298489) Methylovorus glucosetrophus SIP3-4 8171993 YP_003050992.1 CDS Msip34_1219 NC_012969.1 1298742 1299962 R PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1168 hypothetical protein; hypothetical protein complement(1298742..1299962) Methylovorus glucosetrophus SIP3-4 8171994 YP_003050993.1 CDS Msip34_1220 NC_012969.1 1299955 1300674 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1167 ABC transporter related; ABC transporter-like protein complement(1299955..1300674) Methylovorus glucosetrophus SIP3-4 8171995 YP_003050994.1 CDS Msip34_1221 NC_012969.1 1300677 1301912 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_1166 secretion protein HlyD; RND family efflux transporter MFP subunit complement(1300677..1301912) Methylovorus glucosetrophus SIP3-4 8171996 YP_003050995.1 CDS Msip34_1222 NC_012969.1 1301950 1303407 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dar:Daro_1165 outer membrane efflux protein; TolC family type I secretion outer membrane protein complement(1301950..1303407) Methylovorus glucosetrophus SIP3-4 8171997 YP_003050996.1 CDS Msip34_1223 NC_012969.1 1303593 1305188 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1135 ABC transporter related; ABC transporter-like protein complement(1303593..1305188) Methylovorus glucosetrophus SIP3-4 8171998 YP_003050997.1 CDS Msip34_1224 NC_012969.1 1305316 1305918 R PFAM: nitroreductase; KEGG: mfa:Mfla_1136 nitroreductase; nitroreductase complement(1305316..1305918) Methylovorus glucosetrophus SIP3-4 8171999 YP_003050998.1 CDS Msip34_1225 NC_012969.1 1305920 1306423 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_1137 GreA/GreB family elongation factor; GreA/GreB family elongation factor complement(1305920..1306423) Methylovorus glucosetrophus SIP3-4 8172000 YP_003050999.1 CDS Msip34_1226 NC_012969.1 1306665 1308287 R TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: pol:Bpro_2441 bifunctional GMP synthase/glutamine amidotransferase protein; GMP synthase complement(1306665..1308287) Methylovorus glucosetrophus SIP3-4 8172001 YP_003051000.1 CDS Msip34_1227 NC_012969.1 1308359 1309819 R KEGG: mfa:Mfla_1141 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein; inosine-5'-monophosphate dehydrogenase complement(1308359..1309819) Methylovorus glucosetrophus SIP3-4 8172002 YP_003051001.1 CDS Msip34_1228 NC_012969.1 1310041 1310517 D KEGG: mfa:Mfla_1142 hypothetical protein; hypothetical protein 1310041..1310517 Methylovorus glucosetrophus SIP3-4 8172003 YP_003051002.1 CDS Msip34_1229 NC_012969.1 1310625 1310930 R PFAM: protein of unknown function UPF0125; KEGG: tbd:Tbd_1754 hypothetical protein; hypothetical protein complement(1310625..1310930) Methylovorus glucosetrophus SIP3-4 8172004 YP_003051003.1 CDS Msip34_1230 NC_012969.1 1310942 1311373 R PFAM: cyclase/dehydrase; KEGG: mfa:Mfla_1144 cyclase/dehydrase; cyclase/dehydrase complement(1310942..1311373) Methylovorus glucosetrophus SIP3-4 8172005 YP_003051004.1 CDS smpB NC_012969.1 1311490 1311948 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1311490..1311948 Methylovorus glucosetrophus SIP3-4 8172006 YP_003051005.1 CDS Msip34_1232 NC_012969.1 1311956 1313353 R KEGG: gbm:Gbem_2545 hypothetical protein; hypothetical protein complement(1311956..1313353) Methylovorus glucosetrophus SIP3-4 8172007 YP_003051006.1 CDS Msip34_1233 NC_012969.1 1313432 1316047 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfa:Mfla_1760 CheW protein; CheW protein complement(1313432..1316047) Methylovorus glucosetrophus SIP3-4 8172008 YP_003051007.1 CDS Msip34_1234 NC_012969.1 1316264 1317499 D PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_1759 radical SAM family protein; radical SAM protein 1316264..1317499 Methylovorus glucosetrophus SIP3-4 8172009 YP_003051008.1 CDS Msip34_1235 NC_012969.1 1317505 1318365 D KEGG: mfa:Mfla_1758 uracil-DNA glycosylase; uracil-DNA glycosylase 1317505..1318365 Methylovorus glucosetrophus SIP3-4 8172010 YP_003051009.1 CDS Msip34_1236 NC_012969.1 1318448 1319005 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1318448..1319005) Methylovorus glucosetrophus SIP3-4 8172011 YP_003051010.1 CDS Msip34_1237 NC_012969.1 1319065 1320189 R KEGG: mfa:Mfla_1754 hypothetical protein; hypothetical protein complement(1319065..1320189) Methylovorus glucosetrophus SIP3-4 8172012 YP_003051011.1 CDS Msip34_1238 NC_012969.1 1320204 1320713 R TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_1753 GreA/GreB family elongation factor; transcription elongation factor GreB complement(1320204..1320713) Methylovorus glucosetrophus SIP3-4 8172013 YP_003051012.1 CDS Msip34_1239 NC_012969.1 1320727 1323504 D KEGG: mfa:Mfla_1752 DNA helicase/exodeoxyribonuclease V, subunit B; DNA helicase/exodeoxyribonuclease V subunit B 1320727..1323504 Methylovorus glucosetrophus SIP3-4 8172014 YP_003051013.1 CDS Msip34_1240 NC_012969.1 1323513 1326926 D PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_1751 DNA helicase/exodeoxyribonuclease V, subunit A; UvrD/REP helicase 1323513..1326926 Methylovorus glucosetrophus SIP3-4 8172015 YP_003051014.1 CDS Msip34_1241 NC_012969.1 1327014 1327649 R PFAM: SNARE associated Golgi protein; KEGG: mfa:Mfla_1749 hypothetical protein; hypothetical protein complement(1327014..1327649) Methylovorus glucosetrophus SIP3-4 8172016 YP_003051015.1 CDS Msip34_1242 NC_012969.1 1327807 1328718 D PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1750 hypothetical protein; hypothetical protein 1327807..1328718 Methylovorus glucosetrophus SIP3-4 8172017 YP_003051016.1 CDS Msip34_1243 NC_012969.1 1329023 1334425 D PFAM: Hemolysin-type calcium-binding region; WD40 domain protein beta Propeller; KEGG: rec:RHECIAT_CH0000808 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; hemolysin-type calcium-binding protein 1329023..1334425 Methylovorus glucosetrophus SIP3-4 8172018 YP_003051017.1 CDS Msip34_1244 NC_012969.1 1334434 1337850 R KEGG: mfa:Mfla_1748 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; transcription-repair coupling factor complement(1334434..1337850) Methylovorus glucosetrophus SIP3-4 8172019 YP_003051018.1 CDS Msip34_1245 NC_012969.1 1338094 1338375 R KEGG: mfa:Mfla_1747 hypothetical protein; hypothetical protein complement(1338094..1338375) Methylovorus glucosetrophus SIP3-4 8172020 YP_003051019.1 CDS Msip34_1246 NC_012969.1 1338467 1339942 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mfa:Mfla_1746 microcin-processing peptidase 2; peptidase U62 modulator of DNA gyrase complement(1338467..1339942) Methylovorus glucosetrophus SIP3-4 8172021 YP_003051020.1 CDS Msip34_1247 NC_012969.1 1340100 1340960 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mfa:Mfla_1745 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1340100..1340960) Methylovorus glucosetrophus SIP3-4 8172022 YP_003051021.1 CDS Msip34_1248 NC_012969.1 1341074 1344991 R KEGG: mfa:Mfla_1744 hypothetical protein; hypothetical protein complement(1341074..1344991) Methylovorus glucosetrophus SIP3-4 8172023 YP_003051022.1 CDS Msip34_1249 NC_012969.1 1345232 1347133 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1743 ABC transporter related; ABC transporter-like protein 1345232..1347133 Methylovorus glucosetrophus SIP3-4 8172024 YP_003051023.1 CDS Msip34_1250 NC_012969.1 1347176 1347727 D KEGG: mfa:Mfla_1742 hypothetical protein; hypothetical protein 1347176..1347727 Methylovorus glucosetrophus SIP3-4 8172025 YP_003051024.1 CDS Msip34_1251 NC_012969.1 1347845 1348501 R PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: dar:Daro_0703 calcium-binding EF-hand; calcium-binding domain-containing protein complement(1347845..1348501) Methylovorus glucosetrophus SIP3-4 8172026 YP_003051025.1 CDS Msip34_1252 NC_012969.1 1348709 1349248 R KEGG: rso:RS05425 lipoprotein signal peptide; P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein-like protein complement(1348709..1349248) Methylovorus glucosetrophus SIP3-4 8172027 YP_003051026.1 CDS Msip34_1253 NC_012969.1 1349488 1350171 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dar:Daro_0704 response regulator receiver:transcriptional regulatory protein, C-terminal; winged helix family two component transcriptional regulator 1349488..1350171 Methylovorus glucosetrophus SIP3-4 8172028 YP_003051027.1 CDS Msip34_1254 NC_012969.1 1350174 1351628 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0715 periplasmic sensor signal transduction histidine kinase; histidine kinase 1350174..1351628 Methylovorus glucosetrophus SIP3-4 8172029 YP_003051028.1 CDS Msip34_1255 NC_012969.1 1352138 1352821 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cti:RALTA_B1922 putative cyclic nucleotide-binding regulatory protein; Crp/Fnr family transcriptional regulator 1352138..1352821 Methylovorus glucosetrophus SIP3-4 8172030 YP_003051029.1 CDS Msip34_1256 NC_012969.1 1353072 1353575 D KEGG: mfa:Mfla_1317 hypothetical protein; hypothetical protein 1353072..1353575 Methylovorus glucosetrophus SIP3-4 8172031 YP_003051030.1 CDS Msip34_1257 NC_012969.1 1353827 1354147 D KEGG: lhk:LHK_00181 YcgR; hypothetical protein 1353827..1354147 Methylovorus glucosetrophus SIP3-4 8172032 YP_003051031.1 CDS Msip34_1258 NC_012969.1 1354306 1355943 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: abu:Abu_2318 sulfatase; sulfatase 1354306..1355943 Methylovorus glucosetrophus SIP3-4 8172033 YP_003051032.1 CDS Msip34_1259 NC_012969.1 1355972 1356901 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_4935 AraC family transcriptional regulator; AraC family transcriptional regulator complement(1355972..1356901) Methylovorus glucosetrophus SIP3-4 8172034 YP_003051033.1 CDS Msip34_1260 NC_012969.1 1356994 1357872 D PFAM: protein of unknown function DUF1486; KEGG: bam:Bamb_4311 hypothetical protein; hypothetical protein 1356994..1357872 Methylovorus glucosetrophus SIP3-4 8172035 YP_003051034.1 CDS Msip34_1261 NC_012969.1 1358271 1359482 R PFAM: aminotransferase class I and II; KEGG: mfa:Mfla_1319 aminotransferase; class I/II aminotransferase complement(1358271..1359482) Methylovorus glucosetrophus SIP3-4 8172038 YP_003051035.1 CDS Msip34_1262 NC_012969.1 1359612 1360622 R PFAM: TPR repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A3396 trypsin-like serine protease; hypothetical protein complement(1359612..1360622) Methylovorus glucosetrophus SIP3-4 8172039 YP_003051036.1 CDS Msip34_1263 NC_012969.1 1360772 1362808 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1360772..1362808 Methylovorus glucosetrophus SIP3-4 8172040 YP_003051037.1 CDS Msip34_1264 NC_012969.1 1362963 1365704 R KEGG: mfa:Mfla_1321 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Rne/Rng family ribonuclease complement(1362963..1365704) Methylovorus glucosetrophus SIP3-4 8172041 YP_003051038.1 CDS Msip34_1265 NC_012969.1 1366252 1367253 D KEGG: mfa:Mfla_1322 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 1366252..1367253 Methylovorus glucosetrophus SIP3-4 8172042 YP_003051039.1 CDS Msip34_1266 NC_012969.1 1367269 1367928 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1323 HAD family hydrolase; HAD-superfamily hydrolase 1367269..1367928 Methylovorus glucosetrophus SIP3-4 8172043 YP_003051040.1 CDS Msip34_1267 NC_012969.1 1367907 1368269 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: azo:azo1616 ferredoxin protein; Rieske (2Fe-2S) domain-containing protein 1367907..1368269 Methylovorus glucosetrophus SIP3-4 8172044 YP_003051041.1 CDS Msip34_1268 NC_012969.1 1368262 1369212 D PFAM: peptidase S49; KEGG: mfa:Mfla_1324 peptidase S49; peptidase S49 1368262..1369212 Methylovorus glucosetrophus SIP3-4 8172045 YP_003051042.1 CDS Msip34_1269 NC_012969.1 1369309 1370964 R PFAM: phosphoglucose isomerase (PGI); KEGG: mfa:Mfla_1325 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(1369309..1370964) Methylovorus glucosetrophus SIP3-4 8172046 YP_003051043.1 CDS Msip34_1270 NC_012969.1 1371139 1373319 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(1371139..1373319) Methylovorus glucosetrophus SIP3-4 8172047 YP_003051044.1 CDS Msip34_1271 NC_012969.1 1373482 1374762 D TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_1368 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1373482..1374762 Methylovorus glucosetrophus SIP3-4 8172048 YP_003051045.1 CDS Msip34_1272 NC_012969.1 1374834 1376552 D PFAM: glycoside hydrolase family 57; KEGG: mfa:Mfla_1369 glycoside hydrolase family protein; glycoside hydrolase family protein 1374834..1376552 Methylovorus glucosetrophus SIP3-4 8172049 YP_003051046.1 CDS Msip34_1273 NC_012969.1 1376628 1378634 D PFAM: Domain of unknown function DUF1926; Domain of unknown function DUF1925; glycoside hydrolase family 57; KEGG: mfa:Mfla_1370 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 1376628..1378634 Methylovorus glucosetrophus SIP3-4 8172050 YP_003051047.1 CDS Msip34_1274 NC_012969.1 1378666 1379595 D PFAM: ROK family protein; KEGG: mfa:Mfla_1371 glucokinase; ROK family protein 1378666..1379595 Methylovorus glucosetrophus SIP3-4 8172051 YP_003051048.1 CDS Msip34_1275 NC_012969.1 1379691 1381550 D PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: har:HEAR1023 hypothetical protein; diguanylate cyclase/phosphodiesterase 1379691..1381550 Methylovorus glucosetrophus SIP3-4 8172052 YP_003051049.1 CDS Msip34_1276 NC_012969.1 1381672 1382658 R KEGG: mex:Mext_3815 hypothetical protein; hypothetical protein complement(1381672..1382658) Methylovorus glucosetrophus SIP3-4 8172053 YP_003051050.1 CDS Msip34_1277 NC_012969.1 1382928 1385531 R PFAM: glycosyl transferase family 2; glycoside hydrolase family 17; KEGG: mfa:Mfla_1372 glycosyl transferase family protein; family 2 glycosyl transferase complement(1382928..1385531) Methylovorus glucosetrophus SIP3-4 8172054 YP_003051051.1 CDS Msip34_1278 NC_012969.1 1385531 1387177 R KEGG: mfa:Mfla_1373 putative beta (1-6) glucan synthase; putative beta (1-6) glucan synthase complement(1385531..1387177) Methylovorus glucosetrophus SIP3-4 8172055 YP_003051052.1 CDS Msip34_1279 NC_012969.1 1387375 1387839 D KEGG: mfa:Mfla_1374 hypothetical protein; hypothetical protein 1387375..1387839 Methylovorus glucosetrophus SIP3-4 8172056 YP_003051053.1 CDS Msip34_1280 NC_012969.1 1387957 1388775 R PFAM: YdjC family protein; KEGG: mfa:Mfla_1375 hypothetical protein; hypothetical protein complement(1387957..1388775) Methylovorus glucosetrophus SIP3-4 8172057 YP_003051054.1 CDS Msip34_1281 NC_012969.1 1388779 1389777 R PFAM: glycosyl transferase family 2; KEGG: mfa:Mfla_1377 glycosyl transferase family protein; family 2 glycosyl transferase complement(1388779..1389777) Methylovorus glucosetrophus SIP3-4 8172058 YP_003051055.1 CDS Msip34_1282 NC_012969.1 1389801 1391420 R KEGG: mfa:Mfla_1378 hypothetical protein; hypothetical protein complement(1389801..1391420) Methylovorus glucosetrophus SIP3-4 8172059 YP_003051056.1 CDS Msip34_1283 NC_012969.1 1391452 1392564 R TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: mfa:Mfla_1379 4Fe-4S cluster binding; iron-sulfur cluster-binding protein complement(1391452..1392564) Methylovorus glucosetrophus SIP3-4 8172060 YP_003051057.1 CDS Msip34_1284 NC_012969.1 1392565 1393032 D PFAM: protein of unknown function UPF0079; KEGG: mfa:Mfla_1380 hypothetical protein; hypothetical protein 1392565..1393032 Methylovorus glucosetrophus SIP3-4 8171902 YP_003051058.1 CDS Msip34_1285 NC_012969.1 1393010 1394395 D KEGG: mfa:Mfla_1381 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 1393010..1394395 Methylovorus glucosetrophus SIP3-4 8171903 YP_003051059.1 CDS Msip34_1286 NC_012969.1 1394420 1395775 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mfa:Mfla_1382 beta-lactamase-like protein; beta-lactamase domain-containing protein 1394420..1395775 Methylovorus glucosetrophus SIP3-4 8171904 YP_003051060.1 CDS Msip34_1287 NC_012969.1 1395844 1396215 D KEGG: mfa:Mfla_1383 hypothetical protein; hypothetical protein 1395844..1396215 Methylovorus glucosetrophus SIP3-4 8171905 YP_003051061.1 CDS Msip34_1288 NC_012969.1 1396388 1398262 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1384 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 1396388..1398262 Methylovorus glucosetrophus SIP3-4 8171906 YP_003051062.1 CDS Msip34_1289 NC_012969.1 1398373 1399218 D TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rfr:Rfer_2470 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 1398373..1399218 Methylovorus glucosetrophus SIP3-4 8171907 YP_003051063.1 CDS Msip34_1290 NC_012969.1 1399307 1400263 D KEGG: mfa:Mfla_1385 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1399307..1400263 Methylovorus glucosetrophus SIP3-4 8171908 YP_003051064.1 CDS Msip34_1291 NC_012969.1 1400300 1401481 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(1400300..1401481) Methylovorus glucosetrophus SIP3-4 8171909 YP_003051065.1 CDS Msip34_1292 NC_012969.1 1401564 1402442 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: tbd:Tbd_1222 integral membrane protein, DUF6; hypothetical protein 1401564..1402442 Methylovorus glucosetrophus SIP3-4 8171910 YP_003051066.1 CDS Msip34_1293 NC_012969.1 1402399 1403196 R PFAM: intradiol ring-cleavage dioxygenase; KEGG: noc:Noc_2416 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase complement(1402399..1403196) Methylovorus glucosetrophus SIP3-4 8171911 YP_003051067.1 CDS Msip34_1294 NC_012969.1 1403296 1404384 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_1387 twitching motility protein; twitching motility protein complement(1403296..1404384) Methylovorus glucosetrophus SIP3-4 8171912 YP_003051068.1 CDS Msip34_1295 NC_012969.1 1404608 1406965 D KEGG: mfa:Mfla_1388 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1404608..1406965 Methylovorus glucosetrophus SIP3-4 8171913 YP_003051069.1 CDS Msip34_1296 NC_012969.1 1407043 1409136 R PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1389 TPR repeat-containing protein; hypothetical protein complement(1407043..1409136) Methylovorus glucosetrophus SIP3-4 8171914 YP_003051070.1 CDS Msip34_1297 NC_012969.1 1409146 1411212 R TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: mfa:Mfla_1390 hypothetical protein; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC complement(1409146..1411212) Methylovorus glucosetrophus SIP3-4 8171915 YP_003051071.1 CDS Msip34_1298 NC_012969.1 1411368 1411895 D PFAM: Methyltransferase type 12; KEGG: mfa:Mfla_1394 methyltransferase type 12; type 12 methyltransferase 1411368..1411895 Methylovorus glucosetrophus SIP3-4 8171916 YP_003051072.1 CDS Msip34_1299 NC_012969.1 1411902 1413176 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pmy:Pmen_1066 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(1411902..1413176) Methylovorus glucosetrophus SIP3-4 8171917 YP_003051073.1 CDS Msip34_1300 NC_012969.1 1413213 1414019 R PFAM: protein of unknown function DUF1365; KEGG: xac:XAC1376 hypothetical protein; hypothetical protein complement(1413213..1414019) Methylovorus glucosetrophus SIP3-4 8171918 YP_003051074.1 CDS Msip34_1301 NC_012969.1 1414012 1415250 R PFAM: FAD dependent oxidoreductase; KEGG: pfs:PFLU0747 putatite oxidoreductase; FAD dependent oxidoreductase complement(1414012..1415250) Methylovorus glucosetrophus SIP3-4 8171919 YP_003051075.1 CDS Msip34_1302 NC_012969.1 1415247 1416200 R PFAM: fatty acid desaturase; KEGG: xcv:XCV1434 fatty-acid desaturase; stearoyl-CoA 9-desaturase complement(1415247..1416200) Methylovorus glucosetrophus SIP3-4 8171920 YP_003051076.1 CDS Msip34_1303 NC_012969.1 1416200 1416778 R PFAM: Lipocalin family protein; KEGG: ppd:Ppro_0126 lipocalin family protein; lipocalin family protein complement(1416200..1416778) Methylovorus glucosetrophus SIP3-4 8171921 YP_003051077.1 CDS Msip34_1304 NC_012969.1 1416781 1417413 R KEGG: aav:Aave_3567 hypothetical protein; hypothetical protein complement(1416781..1417413) Methylovorus glucosetrophus SIP3-4 8171922 YP_003051078.1 CDS Msip34_1305 NC_012969.1 1417415 1418200 R PFAM: protein of unknown function DUF1295; KEGG: aav:Aave_3566 hypothetical protein; hypothetical protein complement(1417415..1418200) Methylovorus glucosetrophus SIP3-4 8171923 YP_003051079.1 CDS Msip34_1306 NC_012969.1 1418193 1418744 R KEGG: ppd:Ppro_0125 hypothetical protein; hypothetical protein complement(1418193..1418744) Methylovorus glucosetrophus SIP3-4 8171924 YP_003051080.1 CDS Msip34_1307 NC_012969.1 1418759 1419805 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_3565 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(1418759..1419805) Methylovorus glucosetrophus SIP3-4 8171925 YP_003051081.1 CDS Msip34_1308 NC_012969.1 1419832 1420761 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: aeh:Mlg_2255 MerR family transcriptional regulator; MerR family transcriptional regulator complement(1419832..1420761) Methylovorus glucosetrophus SIP3-4 8171926 YP_003051082.1 CDS Msip34_1309 NC_012969.1 1421159 1421860 R KEGG: mpt:Mpe_A3548 hypothetical protein; hypothetical protein complement(1421159..1421860) Methylovorus glucosetrophus SIP3-4 8171927 YP_003051083.1 CDS Msip34_1310 NC_012969.1 1421865 1422428 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: reu:Reut_A0697 sigma-70 region 2:sigma-70 region 4; ECF subfamily RNA polymerase sigma-24 subunit complement(1421865..1422428) Methylovorus glucosetrophus SIP3-4 8171928 YP_003051084.1 CDS Msip34_1311 NC_012969.1 1422524 1424329 D PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: msl:Msil_2867 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 1422524..1424329 Methylovorus glucosetrophus SIP3-4 8171929 YP_003051085.1 CDS Msip34_1312 NC_012969.1 1424391 1425563 D KEGG: mfa:Mfla_1397 putative phospholipase; putative phospholipase 1424391..1425563 Methylovorus glucosetrophus SIP3-4 8171930 YP_003051086.1 CDS Msip34_1313 NC_012969.1 1425650 1426687 R PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1750 hypothetical protein; hypothetical protein complement(1425650..1426687) Methylovorus glucosetrophus SIP3-4 8171931 YP_003051087.1 CDS Msip34_1314 NC_012969.1 1427559 1428014 D KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase 1427559..1428014 Methylovorus glucosetrophus SIP3-4 8171934 YP_003051088.1 CDS Msip34_1315 NC_012969.1 1428107 1428526 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(1428107..1428526) Methylovorus glucosetrophus SIP3-4 8171935 YP_003051089.1 CDS Msip34_1316 NC_012969.1 1428642 1432163 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: mfa:Mfla_1401 condensin subunit Smc; chromosome segregation protein SMC 1428642..1432163 Methylovorus glucosetrophus SIP3-4 8171936 YP_003051090.1 CDS Msip34_1317 NC_012969.1 1432216 1433604 D SMART: ZipA FtsZ-binding region; KEGG: mfa:Mfla_1402 ZipA-like protein; ZipA FtsZ-binding protein 1432216..1433604 Methylovorus glucosetrophus SIP3-4 8171937 YP_003051091.1 CDS Msip34_1318 NC_012969.1 1433629 1435728 D KEGG: dar:Daro_1734 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; helix-hairpin-helix motif; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase 1433629..1435728 Methylovorus glucosetrophus SIP3-4 8171938 YP_003051092.1 CDS Msip34_1319 NC_012969.1 1435718 1436542 D TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: mfa:Mfla_1404 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1435718..1436542 Methylovorus glucosetrophus SIP3-4 8171939 YP_003051093.1 CDS Msip34_1320 NC_012969.1 1436545 1437462 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1405 TPR repeat-containing protein; hypothetical protein 1436545..1437462 Methylovorus glucosetrophus SIP3-4 8171940 YP_003051094.1 CDS Msip34_1321 NC_012969.1 1437585 1438556 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 1437585..1438556 Methylovorus glucosetrophus SIP3-4 8171941 YP_003051095.1 CDS Msip34_1322 NC_012969.1 1438559 1439170 D PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: cvi:CV_0790 putative sulfite oxidase subunit YedZ; ferric reductase domain-containing transmembrane protein 1438559..1439170 Methylovorus glucosetrophus SIP3-4 8171942 YP_003051096.1 CDS Msip34_1323 NC_012969.1 1439230 1439733 D PFAM: DoxX family protein; KEGG: ppg:PputGB1_2006 DoxX family protein; DoxX family protein 1439230..1439733 Methylovorus glucosetrophus SIP3-4 8171943 YP_003051097.1 CDS Msip34_1324 NC_012969.1 1439951 1440628 D PFAM: Conserved TM helix repeat-containing protein; KEGG: mfa:Mfla_1406 TM helix protein; TM helix repeat-containing protein 1439951..1440628 Methylovorus glucosetrophus SIP3-4 8171944 YP_003051098.1 CDS Msip34_1325 NC_012969.1 1440734 1441066 D PFAM: protein of unknown function UPF0060; KEGG: psa:PST_2099 putative inner membrane lipoprotein; hypothetical protein 1440734..1441066 Methylovorus glucosetrophus SIP3-4 8171945 YP_003051099.1 CDS Msip34_1326 NC_012969.1 1441101 1441718 D PFAM: cation efflux protein; KEGG: pmy:Pmen_1162 cation diffusion facilitator family transporter; cation efflux protein 1441101..1441718 Methylovorus glucosetrophus SIP3-4 8171946 YP_003051100.1 CDS Msip34_1327 NC_012969.1 1441841 1442134 D KEGG: mfa:Mfla_1420 hypothetical protein; hypothetical protein 1441841..1442134 Methylovorus glucosetrophus SIP3-4 8171947 YP_003051101.1 CDS Msip34_1328 NC_012969.1 1442147 1444345 D KEGG: mfa:Mfla_1421 phospholipase D/transphosphatidylase; PFAM: SNARE associated Golgi protein; phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D 1442147..1444345 Methylovorus glucosetrophus SIP3-4 8171948 YP_003051102.1 CDS Msip34_1329 NC_012969.1 1444419 1445153 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_1422 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1444419..1445153 Methylovorus glucosetrophus SIP3-4 8171949 YP_003051103.1 CDS Msip34_1330 NC_012969.1 1445298 1445777 R SMART: Calcium-binding EF-hand-containing protein; KEGG: sme:SMc01489 putative signal peptide protein; calcium-binding domain-containing protein complement(1445298..1445777) Methylovorus glucosetrophus SIP3-4 8171950 YP_003051104.1 CDS Msip34_1331 NC_012969.1 1445991 1446521 D KEGG: bpt:Bpet1645 putative secreted protein; putative secreted protein 1445991..1446521 Methylovorus glucosetrophus SIP3-4 8171951 YP_003051105.1 CDS Msip34_1332 NC_012969.1 1446543 1447892 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: abc:ACICU_01280 threonine dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1446543..1447892 Methylovorus glucosetrophus SIP3-4 8171952 YP_003051106.1 CDS Msip34_1333 NC_012969.1 1448462 1449346 D PFAM: dihydrodipicolinate synthetase; KEGG: plu:plu1530 hypothetical protein; dihydrodipicolinate synthetase 1448462..1449346 Methylovorus glucosetrophus SIP3-4 8171953 YP_003051107.1 CDS Msip34_1334 NC_012969.1 1449823 1450761 D hypothetical protein 1449823..1450761 Methylovorus glucosetrophus SIP3-4 8171954 YP_003051108.1 CDS Msip34_1335 NC_012969.1 1451115 1451585 R KEGG: mfa:Mfla_1465 hypothetical protein; hypothetical protein complement(1451115..1451585) Methylovorus glucosetrophus SIP3-4 8171955 YP_003051109.1 CDS Msip34_1336 NC_012969.1 1451585 1451929 R hypothetical protein complement(1451585..1451929) Methylovorus glucosetrophus SIP3-4 8171956 YP_003051110.1 CDS Msip34_1337 NC_012969.1 1452091 1452372 D hypothetical protein 1452091..1452372 Methylovorus glucosetrophus SIP3-4 8171957 YP_003051111.1 CDS Msip34_1338 NC_012969.1 1452448 1453326 D KEGG: mfa:Mfla_1456 hypothetical protein; hypothetical protein 1452448..1453326 Methylovorus glucosetrophus SIP3-4 8171958 YP_003051112.1 CDS Msip34_1339 NC_012969.1 1453393 1454055 D hypothetical protein 1453393..1454055 Methylovorus glucosetrophus SIP3-4 8171959 YP_003051113.1 CDS Msip34_1340 NC_012969.1 1454570 1454848 R hypothetical protein complement(1454570..1454848) Methylovorus glucosetrophus SIP3-4 8171960 YP_003051114.1 CDS Msip34_1341 NC_012969.1 1454919 1455083 D hypothetical protein 1454919..1455083 Methylovorus glucosetrophus SIP3-4 8171961 YP_003051115.1 CDS Msip34_1342 NC_012969.1 1455256 1456089 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0106 short chain dehydrogenase; short chain dehydrogenase complement(1455256..1456089) Methylovorus glucosetrophus SIP3-4 8171962 YP_003051116.1 CDS Msip34_1343 NC_012969.1 1456188 1456784 R PFAM: regulatory protein TetR; KEGG: rfr:Rfer_0303 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1456188..1456784) Methylovorus glucosetrophus SIP3-4 8171963 YP_003051117.1 CDS Msip34_1344 NC_012969.1 1456999 1457409 D PFAM: protein of unknown function DUF326; KEGG: ses:SARI_01721 hypothetical protein; hypothetical protein 1456999..1457409 Methylovorus glucosetrophus SIP3-4 8171964 YP_003051118.1 CDS Msip34_1345 NC_012969.1 1457475 1457993 D KEGG: mfa:Mfla_0673 hypothetical protein; hypothetical protein 1457475..1457993 Methylovorus glucosetrophus SIP3-4 8171965 YP_003051119.1 CDS Msip34_1346 NC_012969.1 1458104 1459009 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_1426 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1458104..1459009) Methylovorus glucosetrophus SIP3-4 8171966 YP_003051120.1 CDS Msip34_1347 NC_012969.1 1459128 1459772 R PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(1459128..1459772) Methylovorus glucosetrophus SIP3-4 8171967 YP_003051121.1 CDS Msip34_1348 NC_012969.1 1460077 1460313 R KEGG: nmu:Nmul_A1283 hypothetical protein; hypothetical protein complement(1460077..1460313) Methylovorus glucosetrophus SIP3-4 8171968 YP_003051122.1 CDS Msip34_1349 NC_012969.1 1460469 1461131 R PFAM: protein of unknown function DUF1345; KEGG: mms:mma_2076 hypothetical protein; hypothetical protein complement(1460469..1461131) Methylovorus glucosetrophus SIP3-4 8171969 YP_003051123.1 CDS Msip34_1350 NC_012969.1 1461278 1461883 R PFAM: YceI family protein; KEGG: mfa:Mfla_1355 YceI; hypothetical protein complement(1461278..1461883) Methylovorus glucosetrophus SIP3-4 8171970 YP_003051124.1 CDS Msip34_1351 NC_012969.1 1461940 1462902 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tbd:Tbd_2379 putative succinylglutamate desuccinylase; succinylglutamate desuccinylase complement(1461940..1462902) Methylovorus glucosetrophus SIP3-4 8171971 YP_003051125.1 CDS Msip34_1352 NC_012969.1 1462906 1465110 R TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1082 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1462906..1465110) Methylovorus glucosetrophus SIP3-4 8171972 YP_003051126.1 CDS Msip34_1353 NC_012969.1 1465339 1465542 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: tbd:Tbd_0679 cold-shock DNA-binding protein family protein; cold-shock DNA-binding domain-containing protein complement(1465339..1465542) Methylovorus glucosetrophus SIP3-4 8171973 YP_003051127.1 CDS Msip34_1354 NC_012969.1 1465829 1466023 D PFAM: CsbD family protein; KEGG: mfa:Mfla_2651 CsbD-like protein; CsbD family protein 1465829..1466023 Methylovorus glucosetrophus SIP3-4 8171974 YP_003051128.1 CDS Msip34_1355 NC_012969.1 1466060 1466605 D KEGG: eba:ebA3357 hypothetical protein; hypothetical protein 1466060..1466605 Methylovorus glucosetrophus SIP3-4 8171975 YP_003051129.1 CDS Msip34_1356 NC_012969.1 1466687 1467733 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: mfa:Mfla_0159 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(1466687..1467733) Methylovorus glucosetrophus SIP3-4 8171976 YP_003051130.1 CDS Msip34_1357 NC_012969.1 1467951 1468178 D hypothetical protein 1467951..1468178 Methylovorus glucosetrophus SIP3-4 8171977 YP_003051131.1 CDS Msip34_1358 NC_012969.1 1468175 1469728 D PFAM: Na+/solute symporter; KEGG: bvi:Bcep1808_6789 Na+/solute symporter; Na+/solute symporter 1468175..1469728 Methylovorus glucosetrophus SIP3-4 8171978 YP_003051132.1 CDS Msip34_1359 NC_012969.1 1469775 1470437 R KEGG: bph:Bphy_6133 hypothetical protein; hypothetical protein complement(1469775..1470437) Methylovorus glucosetrophus SIP3-4 8171979 YP_003051133.1 CDS Msip34_1361 NC_012969.1 1470676 1471167 R hypothetical protein complement(1470676..1471167) Methylovorus glucosetrophus SIP3-4 8172061 YP_003051134.1 CDS Msip34_1362 NC_012969.1 1471331 1471984 R KEGG: bph:Bphy_6133 hypothetical protein; hypothetical protein complement(1471331..1471984) Methylovorus glucosetrophus SIP3-4 8173844 YP_003051135.1 CDS Msip34_1363 NC_012969.1 1471986 1474346 R PFAM: Peptidase M23; KEGG: ypp:YPDSF_1499 hypothetical protein; peptidase M23 complement(1471986..1474346) Methylovorus glucosetrophus SIP3-4 8173845 YP_003051136.1 CDS Msip34_1364 NC_012969.1 1474362 1477064 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_B2108 two domain protein: VgrG and COG4253; ImpA family type VI secretion-associated protein complement(1474362..1477064) Methylovorus glucosetrophus SIP3-4 8173846 YP_003051137.1 CDS Msip34_1365 NC_012969.1 1477171 1477788 R PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(1477171..1477788) Methylovorus glucosetrophus SIP3-4 8173847 YP_003051138.1 CDS Msip34_1366 NC_012969.1 1477931 1478674 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: saz:Sama_0663 ferredoxin--NADP reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(1477931..1478674) Methylovorus glucosetrophus SIP3-4 8173848 YP_003051139.1 CDS Msip34_1367 NC_012969.1 1478822 1479244 D KEGG: afw:Anae109_3189 hypothetical protein; hypothetical protein 1478822..1479244 Methylovorus glucosetrophus SIP3-4 8173849 YP_003051140.1 CDS Msip34_1368 NC_012969.1 1479297 1479434 R KEGG: msl:Msil_2642 hypothetical protein; hypothetical protein complement(1479297..1479434) Methylovorus glucosetrophus SIP3-4 8173850 YP_003051141.1 CDS Msip34_1369 NC_012969.1 1479434 1480438 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: avn:Avin_11040 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(1479434..1480438) Methylovorus glucosetrophus SIP3-4 8173851 YP_003051142.1 CDS Msip34_1370 NC_012969.1 1480441 1481859 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ara:Arad_12230 cytochrome bd-type quinol oxidase subunit 1; cytochrome bd ubiquinol oxidase subunit I complement(1480441..1481859) Methylovorus glucosetrophus SIP3-4 8173852 YP_003051143.1 CDS Msip34_1371 NC_012969.1 1482154 1484349 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bac:BamMC406_4296 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(1482154..1484349) Methylovorus glucosetrophus SIP3-4 8173853 YP_003051144.1 CDS Msip34_1372 NC_012969.1 1484351 1484821 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pmy:Pmen_2198 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein complement(1484351..1484821) Methylovorus glucosetrophus SIP3-4 8173854 YP_003051145.1 CDS Msip34_1373 NC_012969.1 1484892 1485509 R KEGG: tmz:Tmz1t_0201 hypothetical protein; hypothetical protein complement(1484892..1485509) Methylovorus glucosetrophus SIP3-4 8173855 YP_003051146.1 CDS Msip34_1374 NC_012969.1 1485502 1486491 R PFAM: protein of unknown function DUF182; KEGG: har:HEAR1181 hypothetical protein; hypothetical protein complement(1485502..1486491) Methylovorus glucosetrophus SIP3-4 8173856 YP_003051147.1 CDS Msip34_1375 NC_012969.1 1486653 1487570 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: har:HEAR1178 transcriptional regulator; LysR family transcriptional regulator 1486653..1487570 Methylovorus glucosetrophus SIP3-4 8173857 YP_003051148.1 CDS Msip34_1376 NC_012969.1 1487633 1488046 R KEGG: mfa:Mfla_1486 hypothetical protein; hypothetical protein complement(1487633..1488046) Methylovorus glucosetrophus SIP3-4 8173858 YP_003051149.1 CDS Msip34_1377 NC_012969.1 1488127 1488891 R PFAM: beta-lactamase domain protein; KEGG: lhk:LHK_02694 probable hydrolase protein; beta-lactamase domain-containing protein complement(1488127..1488891) Methylovorus glucosetrophus SIP3-4 8173859 YP_003051150.1 CDS Msip34_1378 NC_012969.1 1488882 1489658 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mfa:Mfla_1497 TatD-related deoxyribonuclease; TatD family hydrolase complement(1488882..1489658) Methylovorus glucosetrophus SIP3-4 8173860 YP_003051151.1 CDS Msip34_1379 NC_012969.1 1489778 1490158 R PFAM: type IV pilus assembly PilZ; KEGG: mfa:Mfla_1498 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(1489778..1490158) Methylovorus glucosetrophus SIP3-4 8173861 YP_003051152.1 CDS Msip34_1380 NC_012969.1 1490155 1491177 R TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mfa:Mfla_1499 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' complement(1490155..1491177) Methylovorus glucosetrophus SIP3-4 8173862 YP_003051153.1 CDS Msip34_1381 NC_012969.1 1491174 1491779 R KEGG: mfa:Mfla_1500 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(1491174..1491779) Methylovorus glucosetrophus SIP3-4 8173863 YP_003051154.1 CDS Msip34_1382 NC_012969.1 1491769 1492773 R PFAM: aminodeoxychorismate lyase; KEGG: mfa:Mfla_1501 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(1491769..1492773) Methylovorus glucosetrophus SIP3-4 8173864 YP_003051155.1 CDS Msip34_1383 NC_012969.1 1492760 1493593 R TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; KEGG: mfa:Mfla_1502 aminodeoxychorismate lyase apoprotein; aminodeoxychorismate lyase complement(1492760..1493593) Methylovorus glucosetrophus SIP3-4 8173865 YP_003051156.1 CDS Msip34_1384 NC_012969.1 1493915 1495162 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: mfa:Mfla_1503 3-oxoacyl-[acyl-carrier-protein] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(1493915..1495162) Methylovorus glucosetrophus SIP3-4 8173866 YP_003051157.1 CDS acpP NC_012969.1 1495198 1495434 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1495198..1495434) Methylovorus glucosetrophus SIP3-4 8173867 YP_003051158.1 CDS Msip34_1386 NC_012969.1 1495537 1496277 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_1505 3-oxoacyl-[acyl-carrier-protein] reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(1495537..1496277) Methylovorus glucosetrophus SIP3-4 8173868 YP_003051159.1 CDS Msip34_1387 NC_012969.1 1496296 1497225 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mfa:Mfla_1506 [acyl-carrier-protein] S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(1496296..1497225) Methylovorus glucosetrophus SIP3-4 8173869 YP_003051160.1 CDS Msip34_1388 NC_012969.1 1497248 1498201 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(1497248..1498201) Methylovorus glucosetrophus SIP3-4 8173870 YP_003051161.1 CDS Msip34_1389 NC_012969.1 1498198 1499256 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(1498198..1499256) Methylovorus glucosetrophus SIP3-4 8173871 YP_003051162.1 CDS rpmF NC_012969.1 1499330 1499509 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(1499330..1499509) Methylovorus glucosetrophus SIP3-4 8173872 YP_003051163.1 CDS Msip34_1391 NC_012969.1 1499530 1500033 R PFAM: protein of unknown function DUF177; KEGG: mfa:Mfla_1510 hypothetical protein; hypothetical protein complement(1499530..1500033) Methylovorus glucosetrophus SIP3-4 8173873 YP_003051164.1 CDS Msip34_1392 NC_012969.1 1500088 1501506 D biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit A 1500088..1501506 Methylovorus glucosetrophus SIP3-4 8173874 YP_003051165.1 CDS Msip34_1393 NC_012969.1 1501546 1503396 D catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 1501546..1503396 Methylovorus glucosetrophus SIP3-4 8173875 YP_003051166.1 CDS Msip34_1394 NC_012969.1 1503465 1504046 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mfa:Mfla_1513 maf protein; maf protein 1503465..1504046 Methylovorus glucosetrophus SIP3-4 8173876 YP_003051167.1 CDS Msip34_1395 NC_012969.1 1504073 1505509 D KEGG: mfa:Mfla_1514 hypothetical protein; hypothetical protein 1504073..1505509 Methylovorus glucosetrophus SIP3-4 8173877 YP_003051168.1 CDS Msip34_1396 NC_012969.1 1505514 1506269 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_1515 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 1505514..1506269 Methylovorus glucosetrophus SIP3-4 8173878 YP_003051169.1 CDS Msip34_1397 NC_012969.1 1506266 1506832 R PFAM: ribonuclease HII/HIII; KEGG: mfa:Mfla_1516 RNase HII; Ribonuclease H complement(1506266..1506832) Methylovorus glucosetrophus SIP3-4 8173879 YP_003051170.1 CDS Msip34_1398 NC_012969.1 1506829 1507965 R KEGG: mfa:Mfla_1517 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase complement(1506829..1507965) Methylovorus glucosetrophus SIP3-4 8173880 YP_003051171.1 CDS Msip34_1399 NC_012969.1 1507980 1508765 R TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mfa:Mfla_1518 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(1507980..1508765) Methylovorus glucosetrophus SIP3-4 8173881 YP_003051172.1 CDS fabZ NC_012969.1 1508771 1509232 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1508771..1509232) Methylovorus glucosetrophus SIP3-4 8173882 YP_003051173.1 CDS lpxD NC_012969.1 1509242 1510297 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(1509242..1510297) Methylovorus glucosetrophus SIP3-4 8173883 YP_003051174.1 CDS Msip34_1402 NC_012969.1 1510327 1510830 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: mfa:Mfla_1521 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(1510327..1510830) Methylovorus glucosetrophus SIP3-4 8173884 YP_003051175.1 CDS Msip34_1403 NC_012969.1 1510870 1513218 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mfa:Mfla_1522 surface antigen (D15); outer membrane protein assembly complex protein YaeT complement(1510870..1513218) Methylovorus glucosetrophus SIP3-4 8173885 YP_003051176.1 CDS Msip34_1404 NC_012969.1 1513224 1514576 R KEGG: mfa:Mfla_1523 peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(1513224..1514576) Methylovorus glucosetrophus SIP3-4 8173886 YP_003051177.1 CDS Msip34_1405 NC_012969.1 1514573 1515766 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1514573..1515766) Methylovorus glucosetrophus SIP3-4 8173887 YP_003051178.1 CDS Msip34_1406 NC_012969.1 1515782 1516621 R PFAM: phosphatidate cytidylyltransferase; KEGG: mfa:Mfla_1525 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(1515782..1516621) Methylovorus glucosetrophus SIP3-4 8173888 YP_003051179.1 CDS Msip34_1407 NC_012969.1 1516625 1517374 R KEGG: mfa:Mfla_1526 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(1516625..1517374) Methylovorus glucosetrophus SIP3-4 8173889 YP_003051180.1 CDS Msip34_1408 NC_012969.1 1517414 1517971 R TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: mfa:Mfla_1527 ribosome recycling factor; ribosome recycling factor complement(1517414..1517971) Methylovorus glucosetrophus SIP3-4 8173890 YP_003051181.1 CDS pyrH NC_012969.1 1517999 1518715 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1517999..1518715) Methylovorus glucosetrophus SIP3-4 8173891 YP_003051182.1 CDS tsf NC_012969.1 1518843 1519718 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1518843..1519718) Methylovorus glucosetrophus SIP3-4 8173892 YP_003051183.1 CDS Msip34_1411 NC_012969.1 1519806 1520555 R TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: mfa:Mfla_1530 SSU ribosomal protein S2P; 30S ribosomal protein S2 complement(1519806..1520555) Methylovorus glucosetrophus SIP3-4 8173893 YP_003051184.1 CDS Msip34_1412 NC_012969.1 1520784 1521581 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1520784..1521581 Methylovorus glucosetrophus SIP3-4 8173894 YP_003051185.1 CDS Msip34_1413 NC_012969.1 1521587 1524175 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 1521587..1524175 Methylovorus glucosetrophus SIP3-4 8173895 YP_003051186.1 CDS Msip34_1414 NC_012969.1 1524193 1525368 D PFAM: UMUC domain protein DNA-repair protein; KEGG: mfa:Mfla_0008 DNA-directed DNA polymerase; DNA-directed DNA polymerase 1524193..1525368 Methylovorus glucosetrophus SIP3-4 8173896 YP_003051187.1 CDS Msip34_1415 NC_012969.1 1525398 1526186 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_2669 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1525398..1526186) Methylovorus glucosetrophus SIP3-4 8173897 YP_003051188.1 CDS Msip34_1416 NC_012969.1 1526363 1526638 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: mfa:Mfla_1533 protein of unknown function DUF861, cupin_3; hypothetical protein complement(1526363..1526638) Methylovorus glucosetrophus SIP3-4 8173898 YP_003051189.1 CDS def NC_012969.1 1526860 1527393 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1526860..1527393) Methylovorus glucosetrophus SIP3-4 8173900 YP_003051190.1 CDS Msip34_1418 NC_012969.1 1527383 1528129 R Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase complement(1527383..1528129) Methylovorus glucosetrophus SIP3-4 8173901 YP_003051191.1 CDS Msip34_1419 NC_012969.1 1528261 1529112 D KEGG: mfa:Mfla_1468 squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; squalene synthase 1528261..1529112 Methylovorus glucosetrophus SIP3-4 8173902 YP_003051192.1 CDS Msip34_1420 NC_012969.1 1529129 1529965 D KEGG: mfa:Mfla_1469 squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; squalene synthase 1529129..1529965 Methylovorus glucosetrophus SIP3-4 8173903 YP_003051193.1 CDS Msip34_1421 NC_012969.1 1530012 1531361 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mfa:Mfla_1470 amine oxidase; squalene-associated FAD-dependent desaturase 1530012..1531361 Methylovorus glucosetrophus SIP3-4 8173904 YP_003051194.1 CDS Msip34_1422 NC_012969.1 1531358 1531753 D PFAM: membrane protein of unknown function; KEGG: mfa:Mfla_1471 membrane protein of unknown function; hypothetical protein 1531358..1531753 Methylovorus glucosetrophus SIP3-4 8173905 YP_003051195.1 CDS Msip34_1423 NC_012969.1 1531765 1532511 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A2342 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1531765..1532511 Methylovorus glucosetrophus SIP3-4 8173906 YP_003051196.1 CDS Msip34_1424 NC_012969.1 1532546 1532788 R KEGG: mfa:Mfla_1797 hypothetical protein; hypothetical protein complement(1532546..1532788) Methylovorus glucosetrophus SIP3-4 8173907 YP_003051197.1 CDS Msip34_1425 NC_012969.1 1532971 1533600 D KEGG: dar:Daro_0912 hypothetical protein; hypothetical protein 1532971..1533600 Methylovorus glucosetrophus SIP3-4 8173908 YP_003051198.1 CDS Msip34_1426 NC_012969.1 1533629 1534273 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tmz:Tmz1t_1603 haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase domain-containing protein hydrolase complement(1533629..1534273) Methylovorus glucosetrophus SIP3-4 8173909 YP_003051199.1 CDS Msip34_1427 NC_012969.1 1534294 1535652 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1534294..1535652) Methylovorus glucosetrophus SIP3-4 8173910 YP_003051200.1 CDS Msip34_1428 NC_012969.1 1535645 1536715 R KEGG: mfa:Mfla_1331 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(1535645..1536715) Methylovorus glucosetrophus SIP3-4 8173911 YP_003051201.1 CDS Msip34_1429 NC_012969.1 1536728 1538110 R KEGG: mfa:Mfla_1330 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase complement(1536728..1538110) Methylovorus glucosetrophus SIP3-4 8173912 YP_003051202.1 CDS Msip34_1430 NC_012969.1 1538163 1539332 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class V; KEGG: har:HEAR1919 cystathionine beta-lyase, PLP-dependent (beta-cystathionase); Cys/Met metabolism pyridoxal-phosphate-dependent protein complement(1538163..1539332) Methylovorus glucosetrophus SIP3-4 8173913 YP_003051203.1 CDS Msip34_1431 NC_012969.1 1539448 1539897 R TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: mfa:Mfla_1329 50S ribosomal protein L9P; 50S ribosomal protein L9 complement(1539448..1539897) Methylovorus glucosetrophus SIP3-4 8173914 YP_003051204.1 CDS rpsR NC_012969.1 1539909 1540136 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(1539909..1540136) Methylovorus glucosetrophus SIP3-4 8173915 YP_003051205.1 CDS Msip34_1433 NC_012969.1 1540156 1540467 R PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_1327 single-strand binding protein/primosomal replication protein N; ssDNA-binding protein complement(1540156..1540467) Methylovorus glucosetrophus SIP3-4 8173916 YP_003051206.1 CDS Msip34_1434 NC_012969.1 1540468 1540845 R TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: mfa:Mfla_1326 SSU ribosomal protein S6P; 30S ribosomal protein S6 complement(1540468..1540845) Methylovorus glucosetrophus SIP3-4 8173917 YP_003051207.1 CDS Msip34_1435 NC_012969.1 1540985 1543843 R PFAM: phosphoenolpyruvate carboxylase; KEGG: mms:mma_1141 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(1540985..1543843) Methylovorus glucosetrophus SIP3-4 8173918 YP_003051208.1 CDS Msip34_1436 NC_012969.1 1543929 1545185 D PFAM: protein of unknown function DUF1504; KEGG: lch:Lcho_2148 hypothetical protein; hypothetical protein 1543929..1545185 Methylovorus glucosetrophus SIP3-4 8173919 YP_003051209.1 CDS Msip34_1437 NC_012969.1 1545327 1546808 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: mfa:Mfla_1472 glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 1545327..1546808 Methylovorus glucosetrophus SIP3-4 8173920 YP_003051210.1 CDS Msip34_1438 NC_012969.1 1547053 1547601 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(1547053..1547601) Methylovorus glucosetrophus SIP3-4 8173921 YP_003051211.1 CDS Msip34_1439 NC_012969.1 1547710 1548954 D PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1474 STE24 endopeptidase; Ste24 endopeptidase 1547710..1548954 Methylovorus glucosetrophus SIP3-4 8173922 YP_003051212.1 CDS Msip34_1440 NC_012969.1 1548971 1549279 D KEGG: tbd:Tbd_1840 hypothetical protein; hypothetical protein 1548971..1549279 Methylovorus glucosetrophus SIP3-4 8173923 YP_003051213.1 CDS Msip34_1441 NC_012969.1 1549328 1550206 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1549328..1550206 Methylovorus glucosetrophus SIP3-4 8174005 YP_003051214.1 CDS Msip34_1442 NC_012969.1 1550333 1551250 D PFAM: histone deacetylase superfamily; KEGG: mfa:Mfla_1476 histone deacetylase superfamily protein; histone deacetylase 1550333..1551250 Methylovorus glucosetrophus SIP3-4 8174006 YP_003051215.1 CDS Msip34_1443 NC_012969.1 1551346 1551786 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mfa:Mfla_1477 6-pyruvoyl tetrahydrobiopterin synthase; hypothetical protein 1551346..1551786 Methylovorus glucosetrophus SIP3-4 8174007 YP_003051216.1 CDS Msip34_1444 NC_012969.1 1551839 1552744 R KEGG: mfa:Mfla_2011 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase complement(1551839..1552744) Methylovorus glucosetrophus SIP3-4 8174008 YP_003051217.1 CDS Msip34_1445 NC_012969.1 1552766 1553311 R KEGG: hypothetical protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1552766..1553311) Methylovorus glucosetrophus SIP3-4 8174009 YP_003051218.1 CDS Msip34_1446 NC_012969.1 1553311 1554189 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_2009 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(1553311..1554189) Methylovorus glucosetrophus SIP3-4 8174010 YP_003051219.1 CDS Msip34_1447 NC_012969.1 1554186 1555262 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_2008 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(1554186..1555262) Methylovorus glucosetrophus SIP3-4 8174011 YP_003051220.1 CDS Msip34_1448 NC_012969.1 1555279 1555983 R KEGG: mfa:Mfla_1478 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(1555279..1555983) Methylovorus glucosetrophus SIP3-4 8174012 YP_003051221.1 CDS Msip34_1449 NC_012969.1 1555980 1556444 R PFAM: ribonuclease H; KEGG: mfa:Mfla_1479 RNase HI; ribonuclease H complement(1555980..1556444) Methylovorus glucosetrophus SIP3-4 8174013 YP_003051222.1 CDS Msip34_1450 NC_012969.1 1556447 1557166 R KEGG: mfa:Mfla_1480 methyltransferase type 11; type 11 methyltransferase complement(1556447..1557166) Methylovorus glucosetrophus SIP3-4 8174014 YP_003051223.1 CDS Msip34_1451 NC_012969.1 1557195 1557947 D KEGG: mfa:Mfla_1481 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 1557195..1557947 Methylovorus glucosetrophus SIP3-4 8174015 YP_003051224.1 CDS Msip34_1452 NC_012969.1 1557966 1559729 D PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1482 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1557966..1559729 Methylovorus glucosetrophus SIP3-4 8174016 YP_003051225.1 CDS Msip34_1453 NC_012969.1 1559752 1561416 D PFAM: extracellular solute-binding protein family 5; KEGG: mfa:Mfla_1483 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1559752..1561416 Methylovorus glucosetrophus SIP3-4 8174017 YP_003051226.1 CDS Msip34_1454 NC_012969.1 1561426 1562442 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1484 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1561426..1562442 Methylovorus glucosetrophus SIP3-4 8174018 YP_003051227.1 CDS Msip34_1455 NC_012969.1 1562445 1563281 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1485 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1562445..1563281 Methylovorus glucosetrophus SIP3-4 8174019 YP_003051228.1 CDS Msip34_1456 NC_012969.1 1563386 1564171 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azo:azo1569 enoyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 1563386..1564171 Methylovorus glucosetrophus SIP3-4 8174020 YP_003051229.1 CDS Msip34_1457 NC_012969.1 1564339 1566237 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_1413 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1564339..1566237) Methylovorus glucosetrophus SIP3-4 8174021 YP_003051230.1 CDS Msip34_1458 NC_012969.1 1566680 1566952 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_1412 histone-like DNA-binding protein; histone family protein DNA-binding protein complement(1566680..1566952) Methylovorus glucosetrophus SIP3-4 8174024 YP_003051231.1 CDS Msip34_1459 NC_012969.1 1567056 1569491 R KEGG: mfa:Mfla_1411 Lon-A peptidase; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La complement(1567056..1569491) Methylovorus glucosetrophus SIP3-4 8174025 YP_003051232.1 CDS clpX NC_012969.1 1569661 1570932 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1569661..1570932) Methylovorus glucosetrophus SIP3-4 8174026 YP_003051233.1 CDS Msip34_1461 NC_012969.1 1570967 1571593 R KEGG: mfa:Mfla_1409 ATP-dependent Clp protease proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP complement(1570967..1571593) Methylovorus glucosetrophus SIP3-4 8174027 YP_003051234.1 CDS Msip34_1462 NC_012969.1 1571593 1572894 R TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: mfa:Mfla_1408 trigger factor; trigger factor complement(1571593..1572894) Methylovorus glucosetrophus SIP3-4 8174028 YP_003051235.1 CDS Msip34_1463 NC_012969.1 1573145 1574161 R PFAM: integrase family protein; KEGG: ppu:PP_2297 integrative genetic element Ppu40, integrase; integrase family protein complement(1573145..1574161) Methylovorus glucosetrophus SIP3-4 8174030 YP_003051236.1 CDS Msip34_1464 NC_012969.1 1574330 1578025 R KEGG: bav:BAV0432 hypothetical protein; hypothetical protein complement(1574330..1578025) Methylovorus glucosetrophus SIP3-4 8174031 YP_003051237.1 CDS Msip34_1465 NC_012969.1 1578039 1578272 R KEGG: dar:Daro_0790 hypothetical protein; hypothetical protein complement(1578039..1578272) Methylovorus glucosetrophus SIP3-4 8174032 YP_003051238.1 CDS Msip34_1466 NC_012969.1 1578324 1579139 R PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; integrase catalytic subunit complement(1578324..1579139) Methylovorus glucosetrophus SIP3-4 8174033 YP_003051239.1 CDS Msip34_1467 NC_012969.1 1579196 1579477 R PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein complement(1579196..1579477) Methylovorus glucosetrophus SIP3-4 8174034 YP_003051240.1 CDS Msip34_1468 NC_012969.1 1579538 1579792 R KEGG: dar:Daro_0790 hypothetical protein; hypothetical protein complement(1579538..1579792) Methylovorus glucosetrophus SIP3-4 8174035 YP_003051241.1 CDS Msip34_1469 NC_012969.1 1579792 1580262 R KEGG: ecg:E2348C_2745 hypothetical protein; hypothetical protein complement(1579792..1580262) Methylovorus glucosetrophus SIP3-4 8174036 YP_003051242.1 CDS Msip34_1470 NC_012969.1 1581202 1581606 R PFAM: protein of unknown function DUF1376; KEGG: ecy:ECSE_1413 hypothetical protein; hypothetical protein complement(1581202..1581606) Methylovorus glucosetrophus SIP3-4 8174037 YP_003051243.1 CDS Msip34_1471 NC_012969.1 1581988 1582305 R hypothetical protein complement(1581988..1582305) Methylovorus glucosetrophus SIP3-4 8174038 YP_003051244.1 CDS Msip34_1472 NC_012969.1 1582421 1582657 R KEGG: bvi:Bcep1808_7535 hypothetical protein; hypothetical protein complement(1582421..1582657) Methylovorus glucosetrophus SIP3-4 8174039 YP_003051245.1 CDS Msip34_1473 NC_012969.1 1582742 1583101 R PFAM: BRO domain protein; KEGG: bpm:BURPS1710b_1644 BRO domain-containing protein; prophage antirepressor complement(1582742..1583101) Methylovorus glucosetrophus SIP3-4 8174040 YP_003051246.1 CDS Msip34_1474 NC_012969.1 1583128 1583805 R KEGG: AGAP012727-PA; hypothetical protein complement(1583128..1583805) Methylovorus glucosetrophus SIP3-4 8174041 YP_003051247.1 CDS Msip34_1475 NC_012969.1 1584020 1585021 D KEGG: pfo:Pfl01_3616 hypothetical protein; hypothetical protein 1584020..1585021 Methylovorus glucosetrophus SIP3-4 8174042 YP_003051248.1 CDS Msip34_1476 NC_012969.1 1585248 1585832 R PFAM: Resolvase domain; KEGG: dar:Daro_3652 resolvase, N-terminal; resolvase domain-containing protein complement(1585248..1585832) Methylovorus glucosetrophus SIP3-4 8174043 YP_003051249.1 CDS Msip34_1477 NC_012969.1 1586055 1586504 D hypothetical protein 1586055..1586504 Methylovorus glucosetrophus SIP3-4 8174044 YP_003051250.1 CDS Msip34_1478 NC_012969.1 1586498 1587241 D PFAM: Domain of unknown function DUF1828; KEGG: eba:ebA7089 hypothetical protein; hypothetical protein 1586498..1587241 Methylovorus glucosetrophus SIP3-4 8174045 YP_003051251.1 CDS Msip34_1479 NC_012969.1 1587423 1588628 R KEGG: msl:Msil_1547 hypothetical protein; hypothetical protein complement(1587423..1588628) Methylovorus glucosetrophus SIP3-4 8174046 YP_003051252.1 CDS Msip34_1480 NC_012969.1 1588760 1588957 D hypothetical protein 1588760..1588957 Methylovorus glucosetrophus SIP3-4 8174047 YP_003051253.1 CDS Msip34_1481 NC_012969.1 1589068 1589304 R hypothetical protein complement(1589068..1589304) Methylovorus glucosetrophus SIP3-4 8174048 YP_003051254.1 CDS Msip34_1482 NC_012969.1 1589660 1590952 R PFAM: UMUC domain protein DNA-repair protein; KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(1589660..1590952) Methylovorus glucosetrophus SIP3-4 8174049 YP_003051255.1 CDS Msip34_1483 NC_012969.1 1590930 1591391 R PFAM: peptidase S24 and S26 domain protein; KEGG: eba:p2A243 DNA repair protein; peptidase S24 and S26 domain-containing protein complement(1590930..1591391) Methylovorus glucosetrophus SIP3-4 8174050 YP_003051256.1 CDS Msip34_1484 NC_012969.1 1591979 1592227 D KEGG: mfa:Mfla_1629 hypothetical protein; hypothetical protein 1591979..1592227 Methylovorus glucosetrophus SIP3-4 8174051 YP_003051257.1 CDS Msip34_1485 NC_012969.1 1592305 1593741 D PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1630 outer membrane efflux protein; outer membrane efflux protein 1592305..1593741 Methylovorus glucosetrophus SIP3-4 8174052 YP_003051258.1 CDS Msip34_1486 NC_012969.1 1593760 1594818 D KEGG: mfa:Mfla_1631 hypothetical protein; hypothetical protein 1593760..1594818 Methylovorus glucosetrophus SIP3-4 8174053 YP_003051259.1 CDS Msip34_1487 NC_012969.1 1594901 1598020 D PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_1632 acriflavin resistance protein; acriflavin resistance protein 1594901..1598020 Methylovorus glucosetrophus SIP3-4 8174054 YP_003051260.1 CDS Msip34_1488 NC_012969.1 1598034 1599545 D KEGG: cja:CJA_2460 EAL domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1598034..1599545 Methylovorus glucosetrophus SIP3-4 8174055 YP_003051261.1 CDS Msip34_1489 NC_012969.1 1599549 1599944 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mfa:Mfla_1646 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(1599549..1599944) Methylovorus glucosetrophus SIP3-4 8174056 YP_003051262.1 CDS Msip34_1490 NC_012969.1 1599996 1600622 R PFAM: aspartate/glutamate/uridylate kinase; KEGG: mfa:Mfla_1647 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase complement(1599996..1600622) Methylovorus glucosetrophus SIP3-4 8174057 YP_003051263.1 CDS Msip34_1491 NC_012969.1 1600624 1601994 R KEGG: mfa:Mfla_1648 aminodeoxychorismate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; para-aminobenzoate synthase subunit I complement(1600624..1601994) Methylovorus glucosetrophus SIP3-4 8174058 YP_003051264.1 CDS Msip34_1492 NC_012969.1 1601987 1603045 R TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: mfa:Mfla_1649 S-layer protein, putative; H4MPT-linked C1 transfer pathway protein complement(1601987..1603045) Methylovorus glucosetrophus SIP3-4 8174059 YP_003051265.1 CDS Msip34_1493 NC_012969.1 1603038 1604027 R PFAM: protein of unknown function DUF201; KEGG: mfa:Mfla_1650 hypothetical protein; hypothetical protein complement(1603038..1604027) Methylovorus glucosetrophus SIP3-4 8174060 YP_003051266.1 CDS Msip34_1494 NC_012969.1 1604046 1604744 D PFAM: histidine biosynthesis protein; KEGG: mfa:Mfla_1651 histidine biosynthesis; histidine biosynthesis protein 1604046..1604744 Methylovorus glucosetrophus SIP3-4 8174061 YP_003051267.1 CDS Msip34_1495 NC_012969.1 1604816 1605328 R TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2543 formaldehyde-activating enzyme; formaldehyde-activating protein complement(1604816..1605328) Methylovorus glucosetrophus SIP3-4 8174062 YP_003051268.1 CDS Msip34_1496 NC_012969.1 1605498 1606034 R TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_1652 formaldehyde-activating enzyme; formaldehyde-activating protein complement(1605498..1606034) Methylovorus glucosetrophus SIP3-4 8174063 YP_003051269.1 CDS Msip34_1497 NC_012969.1 1606299 1606835 R PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_1653 hexulose-6-phosphate isomerase; sugar isomerase (SIS) complement(1606299..1606835) Methylovorus glucosetrophus SIP3-4 8174064 YP_003051270.1 CDS Msip34_1498 NC_012969.1 1606960 1607559 D hypothetical protein 1606960..1607559 Methylovorus glucosetrophus SIP3-4 8174065 YP_003051271.1 CDS Msip34_1499 NC_012969.1 1607768 1608721 R KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(1607768..1608721) Methylovorus glucosetrophus SIP3-4 8174066 YP_003051272.1 CDS Msip34_1500 NC_012969.1 1609076 1609918 R PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mfa:Mfla_1656 triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA protein complement(1609076..1609918) Methylovorus glucosetrophus SIP3-4 8174067 YP_003051273.1 CDS Msip34_1501 NC_012969.1 1609919 1610839 R TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: mfa:Mfla_1657 SSU ribosomal protein S6P modification protein; RimK family alpha-L-glutamate ligase complement(1609919..1610839) Methylovorus glucosetrophus SIP3-4 8174068 YP_003051274.1 CDS Msip34_1502 NC_012969.1 1610861 1611844 R catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase complement(1610861..1611844) Methylovorus glucosetrophus SIP3-4 8174069 YP_003051275.1 CDS Msip34_1503 NC_012969.1 1611807 1612973 R PFAM: protein of unknown function DUF201; KEGG: mfa:Mfla_1659 hypothetical protein; hypothetical protein complement(1611807..1612973) Methylovorus glucosetrophus SIP3-4 8174070 YP_003051276.1 CDS Msip34_1504 NC_012969.1 1613001 1613912 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mfa:Mfla_1660 methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative; methylene-tetrahydromethanopterin dehydrogenase complement(1613001..1613912) Methylovorus glucosetrophus SIP3-4 8174071 YP_003051277.1 CDS Msip34_1505 NC_012969.1 1614026 1615036 R TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase domain protein; GHMP kinase; KEGG: mfa:Mfla_1661 beta-ribofuranosylaminobenzene 5'-phosphate synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein complement(1614026..1615036) Methylovorus glucosetrophus SIP3-4 8174072 YP_003051278.1 CDS Msip34_1506 NC_012969.1 1615390 1616688 D KEGG: mfa:Mfla_1662 formylmethanofuran dehydrogenase, subunit B; formylmethanofuran dehydrogenase 1615390..1616688 Methylovorus glucosetrophus SIP3-4 8174073 YP_003051279.1 CDS Msip34_1507 NC_012969.1 1616715 1618394 D TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mfa:Mfla_1663 formylmethanofuran dehydrogenase, subunit A; formylmethanofuran dehydrogenase subunit A 1616715..1618394 Methylovorus glucosetrophus SIP3-4 8174074 YP_003051280.1 CDS Msip34_1508 NC_012969.1 1618391 1619299 D catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase 1618391..1619299 Methylovorus glucosetrophus SIP3-4 8174075 YP_003051281.1 CDS Msip34_1509 NC_012969.1 1619296 1620102 D KEGG: mfa:Mfla_1665 formylmethanofuran dehydrogenase, subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; formylmethanofuran dehydrogenase subunit C 1619296..1620102 Methylovorus glucosetrophus SIP3-4 8174076 YP_003051282.1 CDS Msip34_1510 NC_012969.1 1620248 1620916 D PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: mfa:Mfla_1666 OmpA/MotB; OmpA/MotB domain-containing protein 1620248..1620916 Methylovorus glucosetrophus SIP3-4 8174077 YP_003051283.1 CDS Msip34_1511 NC_012969.1 1620995 1621561 R PFAM: protein of unknown function UPF0029; KEGG: mfa:Mfla_1667 hypothetical protein; hypothetical protein complement(1620995..1621561) Methylovorus glucosetrophus SIP3-4 8174078 YP_003051284.1 CDS Msip34_1512 NC_012969.1 1621665 1622285 D KEGG: rpi:Rpic_0247 putative proline-rich transmembrane protein; hypothetical protein 1621665..1622285 Methylovorus glucosetrophus SIP3-4 8174079 YP_003051285.1 CDS Msip34_1513 NC_012969.1 1622311 1623807 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mfa:Mfla_1668 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein complement(1622311..1623807) Methylovorus glucosetrophus SIP3-4 8174080 YP_003051286.1 CDS Msip34_1514 NC_012969.1 1623819 1624367 R PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_0450 hypothetical protein; hypothetical protein complement(1623819..1624367) Methylovorus glucosetrophus SIP3-4 8174081 YP_003051287.1 CDS Msip34_1515 NC_012969.1 1624333 1625268 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_1669 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein complement(1624333..1625268) Methylovorus glucosetrophus SIP3-4 8174082 YP_003051288.1 CDS Msip34_1516 NC_012969.1 1625415 1626209 D PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_1670 hypothetical protein; hypothetical protein 1625415..1626209 Methylovorus glucosetrophus SIP3-4 8174083 YP_003051289.1 CDS Msip34_1517 NC_012969.1 1626226 1627896 D PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mfa:Mfla_1671 nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 1626226..1627896 Methylovorus glucosetrophus SIP3-4 8173221 YP_003051290.1 CDS Msip34_1518 NC_012969.1 1627889 1628509 D PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1672 hypothetical protein; hypothetical protein 1627889..1628509 Methylovorus glucosetrophus SIP3-4 8173222 YP_003051291.1 CDS Msip34_1519 NC_012969.1 1628506 1629276 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1628506..1629276 Methylovorus glucosetrophus SIP3-4 8173223 YP_003051292.1 CDS Msip34_1520 NC_012969.1 1629294 1630229 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1629294..1630229 Methylovorus glucosetrophus SIP3-4 8173224 YP_003051293.1 CDS Msip34_1521 NC_012969.1 1630302 1631600 D KEGG: mfa:Mfla_1674 sulfate adenylyltransferase subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit 1630302..1631600 Methylovorus glucosetrophus SIP3-4 8173225 YP_003051294.1 CDS Msip34_1522 NC_012969.1 1631712 1632035 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mfa:Mfla_1675 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 1631712..1632035 Methylovorus glucosetrophus SIP3-4 8173226 YP_003051295.1 CDS Msip34_1523 NC_012969.1 1632210 1634039 D KEGG: mfa:Mfla_1097 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 1632210..1634039 Methylovorus glucosetrophus SIP3-4 8173227 YP_003051296.1 CDS Msip34_1524 NC_012969.1 1634117 1635331 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1677 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter complement(1634117..1635331) Methylovorus glucosetrophus SIP3-4 8173228 YP_003051297.1 CDS Msip34_1525 NC_012969.1 1635458 1636645 R KEGG: mfa:Mfla_1680 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE complement(1635458..1636645) Methylovorus glucosetrophus SIP3-4 8173229 YP_003051298.1 CDS Msip34_1526 NC_012969.1 1636694 1636978 R PFAM: coenzyme PQQ synthesis D; KEGG: mfa:Mfla_1681 coenzyme PQQ synthesis D; coenzyme PQQ synthesis D complement(1636694..1636978) Methylovorus glucosetrophus SIP3-4 8173230 YP_003051299.1 CDS Msip34_1527 NC_012969.1 1636953 1637684 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(1636953..1637684) Methylovorus glucosetrophus SIP3-4 8173231 YP_003051300.1 CDS Msip34_1528 NC_012969.1 1637725 1638642 R possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB complement(1637725..1638642) Methylovorus glucosetrophus SIP3-4 8173232 YP_003051301.1 CDS Msip34_1529 NC_012969.1 1638805 1638876 R TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A complement(1638805..1638876) Methylovorus glucosetrophus SIP3-4 8173233 YP_003051302.1 CDS Msip34_1530 NC_012969.1 1639063 1640082 R KEGG: nmu:Nmul_A2194 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1639063..1640082) Methylovorus glucosetrophus SIP3-4 8173234 YP_003051303.1 CDS Msip34_1531 NC_012969.1 1640115 1641218 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1640115..1641218) Methylovorus glucosetrophus SIP3-4 8173235 YP_003051304.1 CDS Msip34_1532 NC_012969.1 1641296 1642462 R KEGG: mfa:Mfla_1685 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1641296..1642462) Methylovorus glucosetrophus SIP3-4 8173236 YP_003051305.1 CDS Msip34_1533 NC_012969.1 1642495 1643571 R TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: mfa:Mfla_1686 chorismate mutase / prephenate dehydratase; chorismate mutase complement(1642495..1643571) Methylovorus glucosetrophus SIP3-4 8173237 YP_003051306.1 CDS Msip34_1534 NC_012969.1 1643581 1644663 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(1643581..1644663) Methylovorus glucosetrophus SIP3-4 8173238 YP_003051307.1 CDS Msip34_1535 NC_012969.1 1644685 1647231 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1644685..1647231) Methylovorus glucosetrophus SIP3-4 8173239 YP_003051308.1 CDS Msip34_1536 NC_012969.1 1647431 1648033 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1689 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1647431..1648033 Methylovorus glucosetrophus SIP3-4 8173240 YP_003051309.1 CDS Msip34_1537 NC_012969.1 1648138 1648359 R KEGG: bpe:BP2560 hypothetical protein; hypothetical protein complement(1648138..1648359) Methylovorus glucosetrophus SIP3-4 8173241 YP_003051310.1 CDS Msip34_1538 NC_012969.1 1648400 1648684 R KEGG: mfa:Mfla_1690 hypothetical protein; hypothetical protein complement(1648400..1648684) Methylovorus glucosetrophus SIP3-4 8173242 YP_003051311.1 CDS Msip34_1539 NC_012969.1 1648791 1649960 R catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase complement(1648791..1649960) Methylovorus glucosetrophus SIP3-4 8173243 YP_003051312.1 CDS Msip34_1540 NC_012969.1 1650172 1651710 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1650172..1651710) Methylovorus glucosetrophus SIP3-4 8173244 YP_003051313.1 CDS Msip34_1541 NC_012969.1 1651781 1652272 R PFAM: Colicin V production protein; KEGG: mfa:Mfla_1693 colicin V production protein; colicin V production protein complement(1651781..1652272) Methylovorus glucosetrophus SIP3-4 8173245 YP_003051314.1 CDS Msip34_1542 NC_012969.1 1652286 1653029 R PFAM: Sporulation domain protein; KEGG: mfa:Mfla_1694 sporulation related; sporulation domain-containing protein complement(1652286..1653029) Methylovorus glucosetrophus SIP3-4 8173246 YP_003051315.1 CDS Msip34_1543 NC_012969.1 1653042 1654334 R TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_1695 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(1653042..1654334) Methylovorus glucosetrophus SIP3-4 8173247 YP_003051316.1 CDS Msip34_1544 NC_012969.1 1654347 1655213 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mfa:Mfla_1696 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(1654347..1655213) Methylovorus glucosetrophus SIP3-4 8173248 YP_003051317.1 CDS Msip34_1545 NC_012969.1 1655226 1656026 R KEGG: mfa:Mfla_1697 tryptophan synthase, alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1655226..1656026) Methylovorus glucosetrophus SIP3-4 8173249 YP_003051318.1 CDS Msip34_1546 NC_012969.1 1656052 1657254 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1656052..1657254) Methylovorus glucosetrophus SIP3-4 8173250 YP_003051319.1 CDS Msip34_1547 NC_012969.1 1657241 1657864 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mfa:Mfla_1699 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase complement(1657241..1657864) Methylovorus glucosetrophus SIP3-4 8173251 YP_003051320.1 CDS truA NC_012969.1 1657958 1658743 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1657958..1658743) Methylovorus glucosetrophus SIP3-4 8173252 YP_003051321.1 CDS Msip34_1549 NC_012969.1 1658856 1662056 R PFAM: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1701 hypothetical protein; peptidoglycan-binding LysM complement(1658856..1662056) Methylovorus glucosetrophus SIP3-4 8173253 YP_003051322.1 CDS Msip34_1550 NC_012969.1 1662201 1663313 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(1662201..1663313) Methylovorus glucosetrophus SIP3-4 8173254 YP_003051323.1 CDS Msip34_1551 NC_012969.1 1663374 1664429 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1663374..1664429) Methylovorus glucosetrophus SIP3-4 8173255 YP_003051324.1 CDS leuD NC_012969.1 1664465 1665103 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1664465..1665103) Methylovorus glucosetrophus SIP3-4 8173256 YP_003051325.1 CDS Msip34_1553 NC_012969.1 1665103 1665216 R PFAM: Entericidin EcnAB; KEGG: neu:NE0686 hypothetical protein; entericidin EcnAB complement(1665103..1665216) Methylovorus glucosetrophus SIP3-4 8173257 YP_003051326.1 CDS Msip34_1554 NC_012969.1 1665320 1666720 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1665320..1666720) Methylovorus glucosetrophus SIP3-4 8173258 YP_003051327.1 CDS Msip34_1555 NC_012969.1 1666816 1667310 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(1666816..1667310) Methylovorus glucosetrophus SIP3-4 8173259 YP_003051328.1 CDS Msip34_1556 NC_012969.1 1667329 1667823 R PFAM: DinB family protein; KEGG: mms:mma_1103 hypothetical protein; DinB family protein complement(1667329..1667823) Methylovorus glucosetrophus SIP3-4 8173260 YP_003051329.1 CDS Msip34_1557 NC_012969.1 1667827 1668138 R PFAM: protein of unknown function DUF1255; KEGG: mfa:Mfla_1707 hypothetical protein; hypothetical protein complement(1667827..1668138) Methylovorus glucosetrophus SIP3-4 8173261 YP_003051330.1 CDS Msip34_1558 NC_012969.1 1668152 1669375 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(1668152..1669375) Methylovorus glucosetrophus SIP3-4 8173262 YP_003051331.1 CDS Msip34_1559 NC_012969.1 1669421 1669729 R KEGG: pnu:Pnuc_0581 hypothetical protein; hypothetical protein complement(1669421..1669729) Methylovorus glucosetrophus SIP3-4 8173263 YP_003051332.1 CDS Msip34_1560 NC_012969.1 1669742 1670659 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1669742..1670659) Methylovorus glucosetrophus SIP3-4 8173264 YP_003051333.1 CDS Msip34_1561 NC_012969.1 1670678 1671859 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mfa:Mfla_1710 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase complement(1670678..1671859) Methylovorus glucosetrophus SIP3-4 8173265 YP_003051334.1 CDS Msip34_1562 NC_012969.1 1671926 1672417 R KEGG: tbd:Tbd_1852 hypothetical protein; hypothetical protein complement(1671926..1672417) Methylovorus glucosetrophus SIP3-4 8173266 YP_003051335.1 CDS Msip34_1563 NC_012969.1 1672420 1672599 R hypothetical protein complement(1672420..1672599) Methylovorus glucosetrophus SIP3-4 8173267 YP_003051336.1 CDS Msip34_1564 NC_012969.1 1672779 1673882 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_1711 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 1672779..1673882 Methylovorus glucosetrophus SIP3-4 8173268 YP_003051337.1 CDS Msip34_1565 NC_012969.1 1673879 1674760 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_1712 hypothetical protein; hypothetical protein 1673879..1674760 Methylovorus glucosetrophus SIP3-4 8173269 YP_003051338.1 CDS Msip34_1566 NC_012969.1 1674837 1675514 D KEGG: mfa:Mfla_1713 hypothetical protein; hypothetical protein 1674837..1675514 Methylovorus glucosetrophus SIP3-4 8173270 YP_003051339.1 CDS Msip34_1567 NC_012969.1 1675519 1676160 R PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1714 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(1675519..1676160) Methylovorus glucosetrophus SIP3-4 8173271 YP_003051340.1 CDS Msip34_1568 NC_012969.1 1676157 1677875 R KEGG: mfa:Mfla_1715 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: PAS domain containing protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1676157..1677875) Methylovorus glucosetrophus SIP3-4 8173272 YP_003051341.1 CDS Msip34_1569 NC_012969.1 1678340 1678609 R KEGG: mfa:Mfla_0664 hypothetical protein; hypothetical protein complement(1678340..1678609) Methylovorus glucosetrophus SIP3-4 8173273 YP_003051342.1 CDS Msip34_1570 NC_012969.1 1678986 1679282 R hypothetical protein complement(1678986..1679282) Methylovorus glucosetrophus SIP3-4 8173274 YP_003051343.1 CDS Msip34_1571 NC_012969.1 1679344 1679583 R hypothetical protein complement(1679344..1679583) Methylovorus glucosetrophus SIP3-4 8173275 YP_003051344.1 CDS Msip34_1572 NC_012969.1 1680153 1683188 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2942 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1680153..1683188 Methylovorus glucosetrophus SIP3-4 8173276 YP_003051345.1 CDS Msip34_1573 NC_012969.1 1683241 1683693 D hypothetical protein 1683241..1683693 Methylovorus glucosetrophus SIP3-4 8173277 YP_003051346.1 CDS Msip34_1574 NC_012969.1 1683739 1684248 D PFAM: HPP family protein; KEGG: pmy:Pmen_2162 HPP family protein+B94; HPP family protein 1683739..1684248 Methylovorus glucosetrophus SIP3-4 8173278 YP_003051347.1 CDS Msip34_1575 NC_012969.1 1684336 1685082 D PFAM: Integral membrane protein TerC; KEGG: mfa:Mfla_2105 integral membrane protein TerC; integral membrane protein TerC 1684336..1685082 Methylovorus glucosetrophus SIP3-4 8173279 YP_003051348.1 CDS Msip34_1576 NC_012969.1 1685147 1687882 R PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: mfa:Mfla_1726 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase complement(1685147..1687882) Methylovorus glucosetrophus SIP3-4 8173280 YP_003051349.1 CDS Msip34_1577 NC_012969.1 1688057 1690018 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1688057..1690018 Methylovorus glucosetrophus SIP3-4 8173281 YP_003051350.1 CDS Msip34_1578 NC_012969.1 1690148 1691359 R KEGG: neu:NE0537 hypothetical protein; hypothetical protein complement(1690148..1691359) Methylovorus glucosetrophus SIP3-4 8173282 YP_003051351.1 CDS Msip34_1579 NC_012969.1 1691359 1693845 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: neu:NE1097 TonB-dependent receptor protein; TonB-dependent siderophore receptor complement(1691359..1693845) Methylovorus glucosetrophus SIP3-4 8173283 YP_003051352.1 CDS Msip34_1580 NC_012969.1 1693948 1694949 R PFAM: FecR protein; KEGG: mms:mma_1234 Fe2+-dicitrate sensor, membrane component; anti-FecI sigma factor FecR complement(1693948..1694949) Methylovorus glucosetrophus SIP3-4 8173284 YP_003051353.1 CDS Msip34_1581 NC_012969.1 1694949 1695455 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: psa:PST_4176 probable sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit complement(1694949..1695455) Methylovorus glucosetrophus SIP3-4 8173285 YP_003051354.1 CDS Msip34_1582 NC_012969.1 1695705 1696145 R PFAM: protein of unknown function DUF442; KEGG: mfa:Mfla_1728 hypothetical protein; hypothetical protein complement(1695705..1696145) Methylovorus glucosetrophus SIP3-4 8173286 YP_003051355.1 CDS Msip34_1583 NC_012969.1 1696192 1696506 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: reu:Reut_A0234 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(1696192..1696506) Methylovorus glucosetrophus SIP3-4 8173287 YP_003051356.1 CDS Msip34_1584 NC_012969.1 1696610 1697305 D PFAM: beta-lactamase domain protein; KEGG: noc:Noc_2007 metallo-beta-lactamase family protein; Hydroxyacylglutathione hydrolase 1696610..1697305 Methylovorus glucosetrophus SIP3-4 8173288 YP_003051357.1 CDS prfC NC_012969.1 1697358 1698926 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1697358..1698926 Methylovorus glucosetrophus SIP3-4 8173289 YP_003051358.1 CDS Msip34_1586 NC_012969.1 1699017 1699742 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: mfa:Mfla_1734 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 1699017..1699742 Methylovorus glucosetrophus SIP3-4 8173290 YP_003051359.1 CDS Msip34_1587 NC_012969.1 1699792 1700472 R KEGG: mfa:Mfla_1735 hypothetical protein; hypothetical protein complement(1699792..1700472) Methylovorus glucosetrophus SIP3-4 8173291 YP_003051360.1 CDS Msip34_1588 NC_012969.1 1700502 1700864 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1736 response regulator receiver domain-containing protein; response regulator receiver protein complement(1700502..1700864) Methylovorus glucosetrophus SIP3-4 8173292 YP_003051361.1 CDS Msip34_1589 NC_012969.1 1700936 1703128 R PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; KEGG: pap:PSPA7_0975 putative bacteriophytochrome; multi-sensor signal transduction histidine kinase complement(1700936..1703128) Methylovorus glucosetrophus SIP3-4 8173293 YP_003051362.1 CDS Msip34_1590 NC_012969.1 1703118 1703699 R PFAM: Haem oxygenase-like; KEGG: aav:Aave_2977 heme oxygenase; Heme oxygenase-like protein complement(1703118..1703699) Methylovorus glucosetrophus SIP3-4 8173294 YP_003051363.1 CDS Msip34_1591 NC_012969.1 1703884 1704732 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bpy:Bphyt_1049 alpha/beta hydrolase fold-3 domain protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(1703884..1704732) Methylovorus glucosetrophus SIP3-4 8173295 YP_003051364.1 CDS Msip34_1592 NC_012969.1 1704749 1704907 D hypothetical protein 1704749..1704907 Methylovorus glucosetrophus SIP3-4 8173296 YP_003051365.1 CDS Msip34_1593 NC_012969.1 1704954 1705085 D hypothetical protein 1704954..1705085 Methylovorus glucosetrophus SIP3-4 8173297 YP_003051366.1 CDS Msip34_1594 NC_012969.1 1705069 1705485 R hypothetical protein complement(1705069..1705485) Methylovorus glucosetrophus SIP3-4 8173298 YP_003051367.1 CDS Msip34_1595 NC_012969.1 1705730 1705873 R KEGG: bph:Bphy_2091 hypothetical protein; hypothetical protein complement(1705730..1705873) Methylovorus glucosetrophus SIP3-4 8173299 YP_003051368.1 CDS Msip34_1596 NC_012969.1 1705920 1707257 R KEGG: mfa:Mfla_1723 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(1705920..1707257) Methylovorus glucosetrophus SIP3-4 8173300 YP_003051369.1 CDS Msip34_1597 NC_012969.1 1707638 1710370 D KEGG: rfr:Rfer_1093 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1707638..1710370 Methylovorus glucosetrophus SIP3-4 8173301 YP_003051370.1 CDS Msip34_1598 NC_012969.1 1710392 1711807 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mfa:Mfla_0336 GntR family transcriptional regulator; aminotransferase domain-containing GntR family transcriptional regulator complement(1710392..1711807) Methylovorus glucosetrophus SIP3-4 8173769 YP_003051371.1 CDS Msip34_1599 NC_012969.1 1711901 1712173 R KEGG: mfa:Mfla_0337 hypothetical protein; hypothetical protein complement(1711901..1712173) Methylovorus glucosetrophus SIP3-4 8174084 YP_003051372.1 CDS Msip34_1600 NC_012969.1 1712160 1714463 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mfa:Mfla_0338 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(1712160..1714463) Methylovorus glucosetrophus SIP3-4 8174085 YP_003051373.1 CDS Msip34_1601 NC_012969.1 1714643 1715656 R catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase complement(1714643..1715656) Methylovorus glucosetrophus SIP3-4 8174086 YP_003051374.1 CDS Msip34_1602 NC_012969.1 1715801 1716331 R PFAM: glutathione peroxidase; KEGG: cvi:CV_1107 glutathione peroxidase; glutathione peroxidase complement(1715801..1716331) Methylovorus glucosetrophus SIP3-4 8174087 YP_003051375.1 CDS Msip34_1603 NC_012969.1 1716892 1718856 D PFAM: acyltransferase 3; KEGG: vsa:VSAL_p54_03 acyltransferase; acyltransferase 3 1716892..1718856 Methylovorus glucosetrophus SIP3-4 8174088 YP_003051376.1 CDS Msip34_1604 NC_012969.1 1718892 1719551 D PFAM: protein of unknown function DUF159; KEGG: rfr:Rfer_4344 hypothetical protein; hypothetical protein 1718892..1719551 Methylovorus glucosetrophus SIP3-4 8174089 YP_003051377.1 CDS Msip34_1605 NC_012969.1 1719529 1719762 R hypothetical protein complement(1719529..1719762) Methylovorus glucosetrophus SIP3-4 8174090 YP_003051378.1 CDS Msip34_1606 NC_012969.1 1719821 1720267 D PFAM: peptidase S24 and S26 domain protein; KEGG: rfr:Rfer_4342 putative prophage repressor; peptidase S24 and S26 domain-containing protein 1719821..1720267 Methylovorus glucosetrophus SIP3-4 8174091 YP_003051379.1 CDS Msip34_1607 NC_012969.1 1720264 1721538 D PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein; DNA-directed DNA polymerase 1720264..1721538 Methylovorus glucosetrophus SIP3-4 8174092 YP_003051380.1 CDS Msip34_1608 NC_012969.1 1721552 1722376 D hypothetical protein 1721552..1722376 Methylovorus glucosetrophus SIP3-4 8174093 YP_003051381.1 CDS Msip34_1609 NC_012969.1 1722462 1723046 R KEGG: xfa:XF2502 hypothetical protein; hypothetical protein complement(1722462..1723046) Methylovorus glucosetrophus SIP3-4 8174094 YP_003051382.1 CDS Msip34_1610 NC_012969.1 1723024 1723380 R KEGG: xfm:Xfasm12_1311 hypothetical protein; hypothetical protein complement(1723024..1723380) Methylovorus glucosetrophus SIP3-4 8174095 YP_003051383.1 CDS Msip34_1611 NC_012969.1 1723389 1723904 R PFAM: Lytic transglycosylase catalytic; KEGG: vpa:VP0901 hypothetical protein; lytic transglycosylase catalytic subunit complement(1723389..1723904) Methylovorus glucosetrophus SIP3-4 8174096 YP_003051384.1 CDS Msip34_1612 NC_012969.1 1724007 1724393 R hypothetical protein complement(1724007..1724393) Methylovorus glucosetrophus SIP3-4 8174097 YP_003051385.1 CDS Msip34_1613 NC_012969.1 1724409 1727405 R hypothetical protein complement(1724409..1727405) Methylovorus glucosetrophus SIP3-4 8174098 YP_003051386.1 CDS Msip34_1614 NC_012969.1 1727580 1727969 R hypothetical protein complement(1727580..1727969) Methylovorus glucosetrophus SIP3-4 8174099 YP_003051387.1 CDS Msip34_1615 NC_012969.1 1727972 1728823 R KEGG: ecg:E2348C_0829 predicted variable tail fibre protein; hypothetical protein complement(1727972..1728823) Methylovorus glucosetrophus SIP3-4 8174100 YP_003051388.1 CDS Msip34_1616 NC_012969.1 1728823 1729797 R KEGG: bpy:Bphyt_1182 hypothetical protein; hypothetical protein complement(1728823..1729797) Methylovorus glucosetrophus SIP3-4 8174101 YP_003051389.1 CDS Msip34_1617 NC_012969.1 1729801 1731243 R KEGG: bpy:Bphyt_1181 hypothetical protein; hypothetical protein complement(1729801..1731243) Methylovorus glucosetrophus SIP3-4 8174102 YP_003051390.1 CDS Msip34_1618 NC_012969.1 1731240 1735619 R TIGRFAM: phage tape measure protein; KEGG: dac:Daci_4084 lambda family phage tail tape measure protein; phage tape measure protein complement(1731240..1735619) Methylovorus glucosetrophus SIP3-4 8174103 YP_003051391.1 CDS Msip34_1619 NC_012969.1 1735945 1736358 R hypothetical protein complement(1735945..1736358) Methylovorus glucosetrophus SIP3-4 8174104 YP_003051392.1 CDS Msip34_1620 NC_012969.1 1736468 1737670 R KEGG: bra:BRADO3638 hypothetical protein; hypothetical protein complement(1736468..1737670) Methylovorus glucosetrophus SIP3-4 8174105 YP_003051393.1 CDS Msip34_1621 NC_012969.1 1737734 1738141 R KEGG: dac:Daci_3246 hypothetical protein; hypothetical protein complement(1737734..1738141) Methylovorus glucosetrophus SIP3-4 8174106 YP_003051394.1 CDS Msip34_1622 NC_012969.1 1738138 1738566 R KEGG: sit:TM1040_0810 hypothetical protein; hypothetical protein complement(1738138..1738566) Methylovorus glucosetrophus SIP3-4 8174107 YP_003051395.1 CDS Msip34_1623 NC_012969.1 1738563 1738946 R KEGG: bpe:BP3373 hypothetical protein; hypothetical protein complement(1738563..1738946) Methylovorus glucosetrophus SIP3-4 8174108 YP_003051396.1 CDS Msip34_1624 NC_012969.1 1739241 1739744 R KEGG: xau:Xaut_3712 hypothetical protein; hypothetical protein complement(1739241..1739744) Methylovorus glucosetrophus SIP3-4 8174109 YP_003051397.1 CDS Msip34_1625 NC_012969.1 1739830 1740249 R KEGG: dac:Daci_3242 hypothetical protein; hypothetical protein complement(1739830..1740249) Methylovorus glucosetrophus SIP3-4 8174110 YP_003051398.1 CDS Msip34_1626 NC_012969.1 1740310 1741278 R KEGG: ppf:Pput_3376 hypothetical protein; hypothetical protein complement(1740310..1741278) Methylovorus glucosetrophus SIP3-4 8174111 YP_003051399.1 CDS Msip34_1627 NC_012969.1 1741314 1742108 R KEGG: pmr:PMI0500 phage protein; phage protein complement(1741314..1742108) Methylovorus glucosetrophus SIP3-4 8174112 YP_003051400.1 CDS Msip34_1628 NC_012969.1 1742227 1742595 R KEGG: cps:CPS_1624 hypothetical protein; hypothetical protein complement(1742227..1742595) Methylovorus glucosetrophus SIP3-4 8174113 YP_003051401.1 CDS Msip34_1629 NC_012969.1 1742786 1743010 R hypothetical protein complement(1742786..1743010) Methylovorus glucosetrophus SIP3-4 8174114 YP_003051402.1 CDS Msip34_1630 NC_012969.1 1743031 1744899 R TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: sit:TM1040_0803 phage putative head morphogenesis protein, SPP1 gp7; phage head morphogenesis protein complement(1743031..1744899) Methylovorus glucosetrophus SIP3-4 8174115 YP_003051403.1 CDS Msip34_1631 NC_012969.1 1744902 1746350 R KEGG: psb:Psyr_2793 hypothetical protein; hypothetical protein complement(1744902..1746350) Methylovorus glucosetrophus SIP3-4 8174116 YP_003051404.1 CDS Msip34_1632 NC_012969.1 1746343 1747629 R PFAM: protein of unknown function DUF264; KEGG: bpe:BP3384 putative phage terminase; hypothetical protein complement(1746343..1747629) Methylovorus glucosetrophus SIP3-4 8174117 YP_003051405.1 CDS Msip34_1633 NC_012969.1 1747619 1748101 R KEGG: bpe:BP3385 hypothetical protein; hypothetical protein complement(1747619..1748101) Methylovorus glucosetrophus SIP3-4 8174118 YP_003051406.1 CDS Msip34_1634 NC_012969.1 1748503 1748739 R hypothetical protein complement(1748503..1748739) Methylovorus glucosetrophus SIP3-4 8174119 YP_003051407.1 CDS Msip34_1635 NC_012969.1 1748770 1749384 R KEGG: reu:Reut_A2385 hypothetical protein; hypothetical protein complement(1748770..1749384) Methylovorus glucosetrophus SIP3-4 8174120 YP_003051408.1 CDS Msip34_1636 NC_012969.1 1749374 1749637 R KEGG: hch:HCH_10019 hypothetical protein; hypothetical protein complement(1749374..1749637) Methylovorus glucosetrophus SIP3-4 8174121 YP_003051409.1 CDS Msip34_1637 NC_012969.1 1749634 1750167 R hypothetical protein complement(1749634..1750167) Methylovorus glucosetrophus SIP3-4 8174122 YP_003051410.1 CDS Msip34_1638 NC_012969.1 1750167 1750634 R PFAM: endodeoxyribonuclease RusA; KEGG: rpi:Rpic_2324 endodeoxyribonuclease RusA; endodeoxyribonuclease RusA complement(1750167..1750634) Methylovorus glucosetrophus SIP3-4 8174123 YP_003051411.1 CDS Msip34_1639 NC_012969.1 1750634 1750813 R hypothetical protein complement(1750634..1750813) Methylovorus glucosetrophus SIP3-4 8174124 YP_003051412.1 CDS Msip34_1640 NC_012969.1 1750800 1750991 R hypothetical protein complement(1750800..1750991) Methylovorus glucosetrophus SIP3-4 8174125 YP_003051413.1 CDS Msip34_1641 NC_012969.1 1750988 1751194 R hypothetical protein complement(1750988..1751194) Methylovorus glucosetrophus SIP3-4 8174126 YP_003051414.1 CDS Msip34_1642 NC_012969.1 1751191 1751412 R hypothetical protein complement(1751191..1751412) Methylovorus glucosetrophus SIP3-4 8174127 YP_003051415.1 CDS Msip34_1643 NC_012969.1 1751402 1751710 R hypothetical protein complement(1751402..1751710) Methylovorus glucosetrophus SIP3-4 8174128 YP_003051416.1 CDS Msip34_1644 NC_012969.1 1751710 1752111 R KEGG: mms:mma_2208 hypothetical protein; hypothetical protein complement(1751710..1752111) Methylovorus glucosetrophus SIP3-4 8174129 YP_003051417.1 CDS Msip34_1645 NC_012969.1 1752095 1753165 R KEGG: bpt:Bpet0969 hypothetical protein; hypothetical protein complement(1752095..1753165) Methylovorus glucosetrophus SIP3-4 8174130 YP_003051418.1 CDS Msip34_1646 NC_012969.1 1753320 1753943 R hypothetical protein complement(1753320..1753943) Methylovorus glucosetrophus SIP3-4 8174131 YP_003051419.1 CDS Msip34_1647 NC_012969.1 1753940 1754140 R hypothetical protein complement(1753940..1754140) Methylovorus glucosetrophus SIP3-4 8174132 YP_003051420.1 CDS Msip34_1648 NC_012969.1 1754137 1754352 R hypothetical protein complement(1754137..1754352) Methylovorus glucosetrophus SIP3-4 8174133 YP_003051421.1 CDS Msip34_1649 NC_012969.1 1754345 1754680 R hypothetical protein complement(1754345..1754680) Methylovorus glucosetrophus SIP3-4 8174134 YP_003051422.1 CDS Msip34_1650 NC_012969.1 1754677 1755048 R hypothetical protein complement(1754677..1755048) Methylovorus glucosetrophus SIP3-4 8174135 YP_003051423.1 CDS Msip34_1651 NC_012969.1 1755147 1755392 R KEGG: pmr:PMI2424 phage regulatory protein; phage regulatory protein complement(1755147..1755392) Methylovorus glucosetrophus SIP3-4 8174136 YP_003051424.1 CDS Msip34_1652 NC_012969.1 1755479 1756159 D PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; SMART: helix-turn-helix domain protein; KEGG: aav:Aave_1686 putative phage repressor; putative phage repressor 1755479..1756159 Methylovorus glucosetrophus SIP3-4 8174137 YP_003051425.1 CDS Msip34_1653 NC_012969.1 1756343 1756552 D hypothetical protein 1756343..1756552 Methylovorus glucosetrophus SIP3-4 8174138 YP_003051426.1 CDS Msip34_1654 NC_012969.1 1756545 1756754 D hypothetical protein 1756545..1756754 Methylovorus glucosetrophus SIP3-4 8174139 YP_003051427.1 CDS Msip34_1655 NC_012969.1 1756845 1757075 D hypothetical protein 1756845..1757075 Methylovorus glucosetrophus SIP3-4 8174140 YP_003051428.1 CDS Msip34_1656 NC_012969.1 1757072 1757284 D hypothetical protein 1757072..1757284 Methylovorus glucosetrophus SIP3-4 8174141 YP_003051429.1 CDS Msip34_1657 NC_012969.1 1757353 1757700 D hypothetical protein 1757353..1757700 Methylovorus glucosetrophus SIP3-4 8174142 YP_003051430.1 CDS Msip34_1658 NC_012969.1 1757697 1757882 D hypothetical protein 1757697..1757882 Methylovorus glucosetrophus SIP3-4 8174143 YP_003051431.1 CDS Msip34_1659 NC_012969.1 1757882 1758076 D hypothetical protein 1757882..1758076 Methylovorus glucosetrophus SIP3-4 8174144 YP_003051432.1 CDS Msip34_1660 NC_012969.1 1758073 1758876 D KEGG: lhk:LHK_01791 RecB; recombinase B 1758073..1758876 Methylovorus glucosetrophus SIP3-4 8174145 YP_003051433.1 CDS Msip34_1661 NC_012969.1 1758881 1760068 D KEGG: bgl:bglu_1g20910 hypothetical protein; hypothetical protein 1758881..1760068 Methylovorus glucosetrophus SIP3-4 8174146 YP_003051434.1 CDS Msip34_1662 NC_012969.1 1760126 1761175 D KEGG: psb:Psyr_2821 hypothetical protein; hypothetical protein 1760126..1761175 Methylovorus glucosetrophus SIP3-4 8174147 YP_003051435.1 CDS Msip34_1663 NC_012969.1 1761330 1761860 D KEGG: rpi:Rpic_2346 hypothetical protein; hypothetical protein 1761330..1761860 Methylovorus glucosetrophus SIP3-4 8174148 YP_003051436.1 CDS Msip34_1664 NC_012969.1 1762017 1764533 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: aav:Aave_1746 DNA methylase N-4/N-6 domain-containing protein; DNA methylase N-4/N-6 domain-containing protein 1762017..1764533 Methylovorus glucosetrophus SIP3-4 8174149 YP_003051437.1 CDS Msip34_1665 NC_012969.1 1764530 1766350 D PFAM: C-5 cytosine-specific DNA methylase; KEGG: ppg:PputGB1_3461 C-5 cytosine-specific DNA methylase; C-5 cytosine-specific DNA methylase 1764530..1766350 Methylovorus glucosetrophus SIP3-4 8174150 YP_003051438.1 CDS Msip34_1666 NC_012969.1 1766347 1766562 D hypothetical protein 1766347..1766562 Methylovorus glucosetrophus SIP3-4 8174151 YP_003051439.1 CDS Msip34_1667 NC_012969.1 1766559 1767038 D PFAM: protein of unknown function DUF1643; KEGG: smd:Smed_1928 hypothetical protein; hypothetical protein 1766559..1767038 Methylovorus glucosetrophus SIP3-4 8174152 YP_003051440.1 CDS Msip34_1668 NC_012969.1 1767035 1767622 D PFAM: heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_A3108 DnaJ-class molecular chaperone; heat shock protein DnaJ domain-containing protein 1767035..1767622 Methylovorus glucosetrophus SIP3-4 8174153 YP_003051441.1 CDS Msip34_1669 NC_012969.1 1767622 1767861 D hypothetical protein 1767622..1767861 Methylovorus glucosetrophus SIP3-4 8174154 YP_003051442.1 CDS Msip34_1670 NC_012969.1 1767858 1768559 D KEGG: bgl:bglu_1g20800 hypothetical protein; hypothetical protein 1767858..1768559 Methylovorus glucosetrophus SIP3-4 8174155 YP_003051443.1 CDS Msip34_1671 NC_012969.1 1768556 1768882 D hypothetical protein 1768556..1768882 Methylovorus glucosetrophus SIP3-4 8174156 YP_003051444.1 CDS Msip34_1672 NC_012969.1 1768928 1769176 D PFAM: Prophage CP4-57 regulatory; KEGG: reu:Reut_A2372 prophage CP4-57 regulatory; phage transcriptional regulator AlpA 1768928..1769176 Methylovorus glucosetrophus SIP3-4 8174157 YP_003051445.1 CDS Msip34_1673 NC_012969.1 1769164 1770384 R PFAM: integrase family protein; KEGG: bvi:Bcep1808_0425 phage integrase family protein; integrase family protein complement(1769164..1770384) Methylovorus glucosetrophus SIP3-4 8174158 YP_003051446.1 CDS Msip34_1674 NC_012969.1 1770701 1771972 R KEGG: mfa:Mfla_1571 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase complement(1770701..1771972) Methylovorus glucosetrophus SIP3-4 8174160 YP_003051447.1 CDS Msip34_1675 NC_012969.1 1772330 1774162 D KEGG: mfa:Mfla_1572 DNA polymerase III, tau subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 1772330..1774162 Methylovorus glucosetrophus SIP3-4 8174162 YP_003051448.1 CDS Msip34_1676 NC_012969.1 1774184 1774495 D PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1573 hypothetical protein; hypothetical protein 1774184..1774495 Methylovorus glucosetrophus SIP3-4 8174163 YP_003051449.1 CDS recR NC_012969.1 1774520 1775119 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1774520..1775119 Methylovorus glucosetrophus SIP3-4 8173029 YP_003051450.1 CDS Msip34_1678 NC_012969.1 1775231 1775881 R TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1575 phosphoglycolate phosphatase; phosphoglycolate phosphatase complement(1775231..1775881) Methylovorus glucosetrophus SIP3-4 8172627 YP_003051451.1 CDS Msip34_1679 NC_012969.1 1775884 1776603 R TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; NodS family protein; methyltransferase small; UbiE/COQ5 methyltransferase; thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: mfa:Mfla_1576 3-demethylubiquinone-9 3-methyltransferase; ubiquinone biosynthesis O-methyltransferase complement(1775884..1776603) Methylovorus glucosetrophus SIP3-4 8172628 YP_003051452.1 CDS Msip34_1680 NC_012969.1 1776570 1777901 R Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase complement(1776570..1777901) Methylovorus glucosetrophus SIP3-4 8172629 YP_003051453.1 CDS Msip34_1681 NC_012969.1 1777958 1779028 R PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1578 OmpA/MotB; OmpA/MotB domain-containing protein complement(1777958..1779028) Methylovorus glucosetrophus SIP3-4 8172630 YP_003051454.1 CDS Msip34_1682 NC_012969.1 1779112 1779816 R PFAM: protein of unknown function DUF556; KEGG: mfa:Mfla_1579 hypothetical protein; hypothetical protein complement(1779112..1779816) Methylovorus glucosetrophus SIP3-4 8172631 YP_003051455.1 CDS Msip34_1683 NC_012969.1 1779813 1780388 R PFAM: protein of unknown function DUF447; KEGG: mfa:Mfla_1580 hypothetical protein; hypothetical protein complement(1779813..1780388) Methylovorus glucosetrophus SIP3-4 8172632 YP_003051456.1 CDS Msip34_1684 NC_012969.1 1780433 1781833 R PFAM: dihydropteroate synthase DHPS; KEGG: mfa:Mfla_1581 dihydropteroate synthase, DhpS; dihydropteroate synthase DHPS complement(1780433..1781833) Methylovorus glucosetrophus SIP3-4 8172633 YP_003051457.1 CDS Msip34_1685 NC_012969.1 1781809 1782357 R PFAM: flavoprotein; KEGG: mfa:Mfla_1582 flavoprotein; flavoprotein complement(1781809..1782357) Methylovorus glucosetrophus SIP3-4 8172634 YP_003051458.1 CDS Msip34_1686 NC_012969.1 1782360 1783679 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(1782360..1783679) Methylovorus glucosetrophus SIP3-4 8172635 YP_003051459.1 CDS Msip34_1687 NC_012969.1 1783749 1784909 R TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); KEGG: mfa:Mfla_1584 tRNA synthetase, class II (G, H, P and S); histidyl-tRNA synthetase 2 complement(1783749..1784909) Methylovorus glucosetrophus SIP3-4 8172636 YP_003051460.1 CDS Msip34_1688 NC_012969.1 1785096 1785284 R KEGG: mfa:Mfla_1585 hypothetical protein; hypothetical protein complement(1785096..1785284) Methylovorus glucosetrophus SIP3-4 8172637 YP_003051461.1 CDS Msip34_1689 NC_012969.1 1785288 1786160 R KEGG: mfa:Mfla_1586 HflC protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein complement(1785288..1786160) Methylovorus glucosetrophus SIP3-4 8172638 YP_003051462.1 CDS Msip34_1690 NC_012969.1 1786176 1787360 R KEGG: mfa:Mfla_1587 HflK protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein complement(1786176..1787360) Methylovorus glucosetrophus SIP3-4 8172639 YP_003051463.1 CDS Msip34_1691 NC_012969.1 1787388 1788527 R TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mfa:Mfla_1588 small GTP-binding protein domain-containing protein; GTP-binding proten HflX complement(1787388..1788527) Methylovorus glucosetrophus SIP3-4 8172640 YP_003051464.1 CDS hfq NC_012969.1 1788552 1788794 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(1788552..1788794) Methylovorus glucosetrophus SIP3-4 8172641 YP_003051465.1 CDS Msip34_1693 NC_012969.1 1789032 1790441 R TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mfa:Mfla_1590 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase complement(1789032..1790441) Methylovorus glucosetrophus SIP3-4 8172642 YP_003051466.1 CDS Msip34_1694 NC_012969.1 1790717 1792375 D KEGG: tbd:Tbd_0552 hypothetical protein; hypothetical protein 1790717..1792375 Methylovorus glucosetrophus SIP3-4 8172643 YP_003051467.1 CDS Msip34_1695 NC_012969.1 1792388 1793803 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1591 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(1792388..1793803) Methylovorus glucosetrophus SIP3-4 8172644 YP_003051468.1 CDS Msip34_1696 NC_012969.1 1793800 1796913 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_1592 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(1793800..1796913) Methylovorus glucosetrophus SIP3-4 8172645 YP_003051469.1 CDS Msip34_1697 NC_012969.1 1796926 1798140 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nmu:Nmul_A0692 secretion protein HlyD; RND family efflux transporter MFP subunit complement(1796926..1798140) Methylovorus glucosetrophus SIP3-4 8172646 YP_003051470.1 CDS Msip34_1698 NC_012969.1 1798261 1798896 D PFAM: regulatory protein TetR; KEGG: nmu:Nmul_A0693 TetR family transcriptional regulator; TetR family transcriptional regulator 1798261..1798896 Methylovorus glucosetrophus SIP3-4 8172647 YP_003051471.1 CDS Msip34_1699 NC_012969.1 1799093 1801249 D KEGG: mms:mma_2307 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1799093..1801249 Methylovorus glucosetrophus SIP3-4 8172648 YP_003051472.1 CDS Msip34_1700 NC_012969.1 1801298 1801639 D KEGG: mfa:Mfla_1595 hypothetical protein; hypothetical protein 1801298..1801639 Methylovorus glucosetrophus SIP3-4 8172649 YP_003051473.1 CDS rimO NC_012969.1 1801674 1803032 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase complement(1801674..1803032) Methylovorus glucosetrophus SIP3-4 8172650 YP_003051474.1 CDS Msip34_1702 NC_012969.1 1803060 1803296 D KEGG: rso:RSc1630 hypothetical protein; hypothetical protein 1803060..1803296 Methylovorus glucosetrophus SIP3-4 8172651 YP_003051475.1 CDS Msip34_1703 NC_012969.1 1803240 1804034 R PFAM: zinc/iron permease; KEGG: mfa:Mfla_1597 zinc/iron permease; zinc/iron permease complement(1803240..1804034) Methylovorus glucosetrophus SIP3-4 8172652 YP_003051476.1 CDS Msip34_1704 NC_012969.1 1804166 1804393 D KEGG: mfa:Mfla_1600 hypothetical protein; hypothetical protein 1804166..1804393 Methylovorus glucosetrophus SIP3-4 8172653 YP_003051477.1 CDS Msip34_1705 NC_012969.1 1804521 1805201 D PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1601 hypothetical protein; hypothetical protein 1804521..1805201 Methylovorus glucosetrophus SIP3-4 8172654 YP_003051478.1 CDS Msip34_1706 NC_012969.1 1805261 1807510 D PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mfa:Mfla_1599 TonB-dependent receptor, plug; TonB-dependent receptor plug 1805261..1807510 Methylovorus glucosetrophus SIP3-4 8172655 YP_003051479.1 CDS Msip34_1707 NC_012969.1 1807530 1808270 R PFAM: protein of unknown function DUF152; KEGG: mfa:Mfla_1611 hypothetical protein; hypothetical protein complement(1807530..1808270) Methylovorus glucosetrophus SIP3-4 8172656 YP_003051480.1 CDS Msip34_1708 NC_012969.1 1808257 1809318 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: mfa:Mfla_1612 ribosomal large subunit pseudouridine synthase D; RluA family pseudouridine synthase complement(1808257..1809318) Methylovorus glucosetrophus SIP3-4 8172657 YP_003051481.1 CDS Msip34_1709 NC_012969.1 1809359 1810165 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: mfa:Mfla_1613 putative competence lipoprotein precursor; outer membrane assembly lipoprotein YfiO 1809359..1810165 Methylovorus glucosetrophus SIP3-4 8172658 YP_003051482.1 CDS engA NC_012969.1 1810190 1811761 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1810190..1811761) Methylovorus glucosetrophus SIP3-4 8172659 YP_003051483.1 CDS Msip34_1711 NC_012969.1 1811765 1812931 R KEGG: mfa:Mfla_1615 pyrrolo-quinoline quinone; TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; outer membrane assembly lipoprotein YfgL complement(1811765..1812931) Methylovorus glucosetrophus SIP3-4 8172660 YP_003051484.1 CDS Msip34_1712 NC_012969.1 1812935 1813561 R KEGG: mfa:Mfla_1616 hypothetical protein; hypothetical protein complement(1812935..1813561) Methylovorus glucosetrophus SIP3-4 8172661 YP_003051485.1 CDS Msip34_1713 NC_012969.1 1813606 1814424 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1617 ABC transporter related; ABC transporter-like protein complement(1813606..1814424) Methylovorus glucosetrophus SIP3-4 8172662 YP_003051486.1 CDS Msip34_1714 NC_012969.1 1814421 1815257 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1618 ABC transporter related; ABC transporter-like protein complement(1814421..1815257) Methylovorus glucosetrophus SIP3-4 8172663 YP_003051487.1 CDS Msip34_1715 NC_012969.1 1815262 1816518 R KEGG: mfa:Mfla_1619 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(1815262..1816518) Methylovorus glucosetrophus SIP3-4 8172664 YP_003051488.1 CDS ispG NC_012969.1 1816534 1817820 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1816534..1817820) Methylovorus glucosetrophus SIP3-4 8172665 YP_003051489.1 CDS Msip34_1717 NC_012969.1 1817823 1818833 R KEGG: mfa:Mfla_1621 hypothetical protein; hypothetical protein complement(1817823..1818833) Methylovorus glucosetrophus SIP3-4 8172666 YP_003051490.1 CDS Msip34_1718 NC_012969.1 1818830 1819585 R KEGG: mfa:Mfla_1622 tetratricopeptide TPR_2; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW complement(1818830..1819585) Methylovorus glucosetrophus SIP3-4 8172667 YP_003051491.1 CDS Msip34_1719 NC_012969.1 1819582 1820685 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_1623 hypothetical protein; radical SAM enzyme, Cfr family complement(1819582..1820685) Methylovorus glucosetrophus SIP3-4 8172668 YP_003051492.1 CDS ndk NC_012969.1 1820692 1821117 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1820692..1821117) Methylovorus glucosetrophus SIP3-4 8172669 YP_003051493.1 CDS Msip34_1721 NC_012969.1 1821244 1821993 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mfa:Mfla_1625 RNA methyltransferase TrmH, group 3; TrmH family RNA methyltransferase complement(1821244..1821993) Methylovorus glucosetrophus SIP3-4 8172670 YP_003051494.1 CDS Msip34_1722 NC_012969.1 1822000 1824444 R KEGG: mfa:Mfla_1626 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; RNA binding S1 domain protein; ribonuclease R complement(1822000..1824444) Methylovorus glucosetrophus SIP3-4 8172671 YP_003051495.1 CDS Msip34_1723 NC_012969.1 1824881 1825495 R PFAM: phosphoribosyltransferase; KEGG: mfa:Mfla_1280 phosphoribosyltransferase; phosphoribosyltransferase complement(1824881..1825495) Methylovorus glucosetrophus SIP3-4 8172673 YP_003051496.1 CDS Msip34_1724 NC_012969.1 1825502 1827436 R PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_1278 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(1825502..1827436) Methylovorus glucosetrophus SIP3-4 8172674 YP_003051497.1 CDS Msip34_1725 NC_012969.1 1827665 1828831 R KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(1827665..1828831) Methylovorus glucosetrophus SIP3-4 8172675 YP_003051498.1 CDS Msip34_1726 NC_012969.1 1829231 1829929 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_1267 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1829231..1829929 Methylovorus glucosetrophus SIP3-4 8172676 YP_003051499.1 CDS Msip34_1727 NC_012969.1 1829904 1831040 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mfa:Mfla_1266 radical SAM family protein; radical SAM protein 1829904..1831040 Methylovorus glucosetrophus SIP3-4 8172677 YP_003051500.1 CDS Msip34_1728 NC_012969.1 1831102 1831500 R PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_1265 RNA-binding S4; RNA-binding S4 domain-containing protein complement(1831102..1831500) Methylovorus glucosetrophus SIP3-4 8172678 YP_003051501.1 CDS Msip34_1729 NC_012969.1 1831497 1833680 R KEGG: mfa:Mfla_1264 ATP-dependent protease-like protein; ATP-dependent protease-like protein complement(1831497..1833680) Methylovorus glucosetrophus SIP3-4 8172679 YP_003051502.1 CDS Msip34_1730 NC_012969.1 1833732 1834187 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mfa:Mfla_1263 molybdopterin synthase subunit MoaE; molybdopterin biosynthesis MoaE protein complement(1833732..1834187) Methylovorus glucosetrophus SIP3-4 8172680 YP_003051503.1 CDS Msip34_1731 NC_012969.1 1834194 1834445 R TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: mfa:Mfla_1262 molybdopterin synthase subunit MoaD; molybdopterin converting factor subunit 1 complement(1834194..1834445) Methylovorus glucosetrophus SIP3-4 8172681 YP_003051504.1 CDS Msip34_1732 NC_012969.1 1834442 1834618 R hypothetical protein complement(1834442..1834618) Methylovorus glucosetrophus SIP3-4 8172682 YP_003051505.1 CDS Msip34_1733 NC_012969.1 1834646 1836001 R PFAM: protein of unknown function DUF195; KEGG: mfa:Mfla_1261 hypothetical protein; hypothetical protein complement(1834646..1836001) Methylovorus glucosetrophus SIP3-4 8172683 YP_003051506.1 CDS Msip34_1734 NC_012969.1 1836116 1837843 D PFAM: CHASE2 domain protein; KEGG: sse:Ssed_3621 putative adenylate/guanylate cyclase; putative Chase2 sensor protein 1836116..1837843 Methylovorus glucosetrophus SIP3-4 8172684 YP_003051507.1 CDS Msip34_1735 NC_012969.1 1837846 1838355 D PFAM: SH3 type 3 domain protein; KEGG: tbd:Tbd_0981 hypothetical protein; SH3 type 3 domain-containing protein 1837846..1838355 Methylovorus glucosetrophus SIP3-4 8172685 YP_003051508.1 CDS Msip34_1736 NC_012969.1 1838352 1839248 D PFAM: peptidase M48 Ste24p; KEGG: tbd:Tbd_0982 TPR repeat-containing Zn-dependent protease; peptidase M48 Ste24p 1838352..1839248 Methylovorus glucosetrophus SIP3-4 8172686 YP_003051509.1 CDS Msip34_1737 NC_012969.1 1839336 1841144 R TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: mfa:Mfla_1259 GTP-binding protein TypA; GTP-binding protein TypA complement(1839336..1841144) Methylovorus glucosetrophus SIP3-4 8172687 YP_003051510.1 CDS Msip34_1738 NC_012969.1 1841488 1842894 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1258 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 1841488..1842894 Methylovorus glucosetrophus SIP3-4 8172688 YP_003051511.1 CDS Msip34_1739 NC_012969.1 1842933 1844312 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1257 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 1842933..1844312 Methylovorus glucosetrophus SIP3-4 8172689 YP_003051512.1 CDS Msip34_1740 NC_012969.1 1844390 1844803 R PFAM: globin; KEGG: mfa:Mfla_1256 globin; globin complement(1844390..1844803) Methylovorus glucosetrophus SIP3-4 8172690 YP_003051513.1 CDS purT NC_012969.1 1844803 1846002 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(1844803..1846002) Methylovorus glucosetrophus SIP3-4 8172691 YP_003051514.1 CDS Msip34_1742 NC_012969.1 1846100 1847533 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_1254 two component, sigma54 specific, fis family transcriptional regulator; Fis family two component sigma54 specific transcriptional regulator complement(1846100..1847533) Methylovorus glucosetrophus SIP3-4 8172692 YP_003051515.1 CDS Msip34_1743 NC_012969.1 1847546 1849906 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1253 TonB-dependent receptor; TonB-dependent receptor complement(1847546..1849906) Methylovorus glucosetrophus SIP3-4 8172693 YP_003051516.1 CDS Msip34_1744 NC_012969.1 1850109 1852598 R PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_1252 hypothetical protein; hypothetical protein complement(1850109..1852598) Methylovorus glucosetrophus SIP3-4 8172694 YP_003051517.1 CDS Msip34_1745 NC_012969.1 1852595 1853284 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1251 ABC transporter related; ABC transporter-like protein complement(1852595..1853284) Methylovorus glucosetrophus SIP3-4 8172695 YP_003051518.1 CDS Msip34_1746 NC_012969.1 1853340 1853924 D PFAM: lipolytic protein G-D-S-L family; KEGG: mfa:Mfla_1250 arylesterase; arylesterase 1853340..1853924 Methylovorus glucosetrophus SIP3-4 8172696 YP_003051519.1 CDS Msip34_1747 NC_012969.1 1853921 1855291 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: mfa:Mfla_1249 tRNA(Ile)-lysidine synthetase-like protein; tRNA(Ile)-lysidine synthetase complement(1853921..1855291) Methylovorus glucosetrophus SIP3-4 8172697 YP_003051520.1 CDS Msip34_1748 NC_012969.1 1855312 1856292 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1855312..1856292) Methylovorus glucosetrophus SIP3-4 8172698 YP_003051521.1 CDS Msip34_1749 NC_012969.1 1856320 1859769 R KEGG: mfa:Mfla_1247 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(1856320..1859769) Methylovorus glucosetrophus SIP3-4 8172699 YP_003051522.1 CDS Msip34_1750 NC_012969.1 1859943 1865219 R PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: dar:Daro_3895 response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; CheA signal transduction histidine kinase complement(1859943..1865219) Methylovorus glucosetrophus SIP3-4 8172700 YP_003051523.1 CDS Msip34_1751 NC_012969.1 1865245 1866930 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: mfa:Mfla_1245 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1865245..1866930) Methylovorus glucosetrophus SIP3-4 8172701 YP_003051524.1 CDS Msip34_1752 NC_012969.1 1867063 1867578 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfa:Mfla_1244 CheW protein; CheW protein complement(1867063..1867578) Methylovorus glucosetrophus SIP3-4 8172702 YP_003051525.1 CDS Msip34_1753 NC_012969.1 1867565 1867942 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1243 response regulator receiver domain-containing protein; response regulator receiver protein complement(1867565..1867942) Methylovorus glucosetrophus SIP3-4 8172703 YP_003051526.1 CDS Msip34_1754 NC_012969.1 1867945 1868352 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1242 response regulator receiver protein; response regulator receiver protein complement(1867945..1868352) Methylovorus glucosetrophus SIP3-4 8172704 YP_003051527.1 CDS Msip34_1755 NC_012969.1 1868585 1869745 D PFAM: domain of unknown function DUF1745; KEGG: mfa:Mfla_1241 hypothetical protein; hypothetical protein 1868585..1869745 Methylovorus glucosetrophus SIP3-4 8172705 YP_003051528.1 CDS Msip34_1756 NC_012969.1 1869964 1870467 D PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mfa:Mfla_1240 thiol peroxidase (atypical 2-Cys peroxiredoxin); redoxin domain-containing protein 1869964..1870467 Methylovorus glucosetrophus SIP3-4 8172706 YP_003051529.1 CDS Msip34_1757 NC_012969.1 1870574 1871257 R KEGG: mfa:Mfla_1024 hypothetical protein; hypothetical protein complement(1870574..1871257) Methylovorus glucosetrophus SIP3-4 8174244 YP_003051530.1 CDS Msip34_1758 NC_012969.1 1871358 1873835 R KEGG: mfa:Mfla_1023 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(1871358..1873835) Methylovorus glucosetrophus SIP3-4 8174245 YP_003051531.1 CDS Msip34_1759 NC_012969.1 1874081 1874506 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1022 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1874081..1874506) Methylovorus glucosetrophus SIP3-4 8174246 YP_003051532.1 CDS Msip34_1760 NC_012969.1 1874503 1875246 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1021 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1874503..1875246) Methylovorus glucosetrophus SIP3-4 8174247 YP_003051533.1 CDS Msip34_1761 NC_012969.1 1875303 1876073 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_1020 TonB-like protein; TonB family protein complement(1875303..1876073) Methylovorus glucosetrophus SIP3-4 8174248 YP_003051534.1 CDS Msip34_1762 NC_012969.1 1876075 1876317 R KEGG: mfa:Mfla_1019 hypothetical protein; hypothetical protein complement(1876075..1876317) Methylovorus glucosetrophus SIP3-4 8174249 YP_003051535.1 CDS Msip34_1763 NC_012969.1 1876327 1876524 R KEGG: rpc:RPC_1970 hypothetical protein; hypothetical protein complement(1876327..1876524) Methylovorus glucosetrophus SIP3-4 8174250 YP_003051536.1 CDS Msip34_1764 NC_012969.1 1876733 1877350 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(1876733..1877350) Methylovorus glucosetrophus SIP3-4 8174251 YP_003051537.1 CDS Msip34_1765 NC_012969.1 1877382 1877660 R KEGG: neu:NE2142 hypothetical protein; hypothetical protein complement(1877382..1877660) Methylovorus glucosetrophus SIP3-4 8174252 YP_003051538.1 CDS Msip34_1766 NC_012969.1 1877813 1879300 R PFAM: protein of unknown function DUF1555; KEGG: avn:Avin_45680 alkaline phosphatase; hypothetical protein complement(1877813..1879300) Methylovorus glucosetrophus SIP3-4 8174253 YP_003051539.1 CDS Msip34_1767 NC_012969.1 1879486 1881372 R molecular chaperone; heat shock protein 90 complement(1879486..1881372) Methylovorus glucosetrophus SIP3-4 8174254 YP_003051540.1 CDS Msip34_1768 NC_012969.1 1881524 1882168 R PFAM: regulatory protein TetR; KEGG: msl:Msil_3427 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1881524..1882168) Methylovorus glucosetrophus SIP3-4 8174255 YP_003051541.1 CDS Msip34_1769 NC_012969.1 1882402 1883733 D PFAM: Luciferase-like monooxygenase; KEGG: bpy:Bphyt_2100 putative xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family; luciferase-like monooxygenase 1882402..1883733 Methylovorus glucosetrophus SIP3-4 8174256 YP_003051542.1 CDS Msip34_1770 NC_012969.1 1883730 1885061 D PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rme:Rmet_0776 major facilitator superfamily MFS_1; major facilitator superfamily protein 1883730..1885061 Methylovorus glucosetrophus SIP3-4 8174257 YP_003051543.1 CDS Msip34_1771 NC_012969.1 1885138 1887453 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1016 TonB-dependent receptor; TonB-dependent receptor 1885138..1887453 Methylovorus glucosetrophus SIP3-4 8174258 YP_003051544.1 CDS Msip34_1772 NC_012969.1 1887614 1887877 D KEGG: mfa:Mfla_1015 hypothetical protein; hypothetical protein 1887614..1887877 Methylovorus glucosetrophus SIP3-4 8174259 YP_003051545.1 CDS Msip34_1773 NC_012969.1 1887947 1888108 R KEGG: lch:Lcho_1251 hypothetical protein; hypothetical protein complement(1887947..1888108) Methylovorus glucosetrophus SIP3-4 8174260 YP_003051546.1 CDS Msip34_1774 NC_012969.1 1888119 1888946 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mfa:Mfla_1014 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD-binding protein complement(1888119..1888946) Methylovorus glucosetrophus SIP3-4 8174261 YP_003051547.1 CDS Msip34_1775 NC_012969.1 1888950 1889936 R KEGG: mfa:Mfla_1013 hypothetical protein; hypothetical protein complement(1888950..1889936) Methylovorus glucosetrophus SIP3-4 8174262 YP_003051548.1 CDS acpS NC_012969.1 1889936 1890316 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(1889936..1890316) Methylovorus glucosetrophus SIP3-4 8174263 YP_003051549.1 CDS Msip34_1777 NC_012969.1 1890354 1891085 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(1890354..1891085) Methylovorus glucosetrophus SIP3-4 8174264 YP_003051550.1 CDS recO NC_012969.1 1891138 1891863 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(1891138..1891863) Methylovorus glucosetrophus SIP3-4 8174265 YP_003051551.1 CDS Msip34_1779 NC_012969.1 1892002 1892904 R TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mfa:Mfla_1008 GTP-binding protein Era; GTP-binding protein Era complement(1892002..1892904) Methylovorus glucosetrophus SIP3-4 8174266 YP_003051552.1 CDS Msip34_1780 NC_012969.1 1892919 1893593 R KEGG: mfa:Mfla_1007 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(1892919..1893593) Methylovorus glucosetrophus SIP3-4 8174267 YP_003051553.1 CDS Msip34_1781 NC_012969.1 1893599 1893970 R KEGG: mfa:Mfla_1006 putative transmembrane protein; hypothetical protein complement(1893599..1893970) Methylovorus glucosetrophus SIP3-4 8174268 YP_003051554.1 CDS Msip34_1782 NC_012969.1 1893983 1894729 R KEGG: mfa:Mfla_1005 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(1893983..1894729) Methylovorus glucosetrophus SIP3-4 8174269 YP_003051555.1 CDS Msip34_1783 NC_012969.1 1894726 1896519 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1894726..1896519) Methylovorus glucosetrophus SIP3-4 8174270 YP_003051556.1 CDS Msip34_1784 NC_012969.1 1896787 1898208 R KEGG: mfa:Mfla_1003 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(1896787..1898208) Methylovorus glucosetrophus SIP3-4 8174271 YP_003051557.1 CDS Msip34_1785 NC_012969.1 1898411 1899379 R PFAM: MucB/RseB family protein; KEGG: mfa:Mfla_1002 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein MucB/RseB complement(1898411..1899379) Methylovorus glucosetrophus SIP3-4 8174272 YP_003051558.1 CDS Msip34_1786 NC_012969.1 1899379 1899834 R PFAM: Anti sigma-E protein RseA family protein; KEGG: mfa:Mfla_1001 hypothetical protein; anti sigma-E protein RseA complement(1899379..1899834) Methylovorus glucosetrophus SIP3-4 8174273 YP_003051559.1 CDS Msip34_1787 NC_012969.1 1899851 1900453 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(1899851..1900453) Methylovorus glucosetrophus SIP3-4 8174274 YP_003051560.1 CDS Msip34_1788 NC_012969.1 1900647 1902305 D TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mfa:Mfla_0999 L-aspartate oxidase; L-aspartate oxidase 1900647..1902305 Methylovorus glucosetrophus SIP3-4 8174275 YP_003051561.1 CDS Msip34_1789 NC_012969.1 1902326 1902661 D KEGG: mfa:Mfla_2084 hypothetical protein; hypothetical protein 1902326..1902661 Methylovorus glucosetrophus SIP3-4 8174276 YP_003051562.1 CDS Msip34_1790 NC_012969.1 1902683 1903471 R KEGG: dar:Daro_3154 hypothetical protein; hypothetical protein complement(1902683..1903471) Methylovorus glucosetrophus SIP3-4 8174277 YP_003051563.1 CDS Msip34_1791 NC_012969.1 1903468 1904370 R PFAM: protein of unknown function DUF692; KEGG: nmu:Nmul_A2550 hypothetical protein; hypothetical protein complement(1903468..1904370) Methylovorus glucosetrophus SIP3-4 8174278 YP_003051564.1 CDS Msip34_1792 NC_012969.1 1904372 1904704 R KEGG: pau:PA14_21570 hypothetical protein; hypothetical protein complement(1904372..1904704) Methylovorus glucosetrophus SIP3-4 8174279 YP_003051565.1 CDS Msip34_1793 NC_012969.1 1904789 1905040 R KEGG: azo:azo2858 hypothetical protein; hypothetical protein complement(1904789..1905040) Methylovorus glucosetrophus SIP3-4 8174280 YP_003051566.1 CDS Msip34_1794 NC_012969.1 1905085 1905648 R TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: reh:H16_B2413 DNA-directed RNA polymerase sigma subunit (RpoE,sigma24); ECF subfamily RNA polymerase sigma-24 subunit complement(1905085..1905648) Methylovorus glucosetrophus SIP3-4 8174281 YP_003051567.1 CDS Msip34_1795 NC_012969.1 1905769 1906209 R PFAM: Domain of unknown function DUF1841; KEGG: mfa:Mfla_0998 hypothetical protein; hypothetical protein complement(1905769..1906209) Methylovorus glucosetrophus SIP3-4 8174282 YP_003051568.1 CDS Msip34_1796 NC_012969.1 1906212 1907276 R KEGG: mfa:Mfla_0996 hypothetical protein; hypothetical protein complement(1906212..1907276) Methylovorus glucosetrophus SIP3-4 8174283 YP_003051569.1 CDS Msip34_1797 NC_012969.1 1907273 1907905 R KEGG: mfa:Mfla_0995 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(1907273..1907905) Methylovorus glucosetrophus SIP3-4 8174284 YP_003051570.1 CDS Msip34_1798 NC_012969.1 1907947 1908846 R TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmj:BMULJ_02313 electron transport complex protein; RnfABCDGE type electron transport complex subunit B complement(1907947..1908846) Methylovorus glucosetrophus SIP3-4 8174285 YP_003051571.1 CDS Msip34_1799 NC_012969.1 1909051 1909923 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1909051..1909923 Methylovorus glucosetrophus SIP3-4 8174286 YP_003051572.1 CDS Msip34_1800 NC_012969.1 1909955 1911217 D KEGG: mfa:Mfla_0986 uncharacterized lipoprotein; lipoprotein 1909955..1911217 Methylovorus glucosetrophus SIP3-4 8174287 YP_003051573.1 CDS Msip34_1801 NC_012969.1 1911266 1912042 D PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_0985 beta-lactamase-like protein; beta-lactamase domain-containing protein 1911266..1912042 Methylovorus glucosetrophus SIP3-4 8174288 YP_003051574.1 CDS Msip34_1802 NC_012969.1 1912234 1912371 R hypothetical protein complement(1912234..1912371) Methylovorus glucosetrophus SIP3-4 8174289 YP_003051575.1 CDS Msip34_1803 NC_012969.1 1912627 1913487 R PFAM: NolW domain protein; KEGG: mfa:Mfla_0983 NolW-like protein; NolW domain-containing protein complement(1912627..1913487) Methylovorus glucosetrophus SIP3-4 8174290 YP_003051576.1 CDS Msip34_1804 NC_012969.1 1913491 1913979 R KEGG: tbd:Tbd_0584 hypothetical protein; hypothetical protein complement(1913491..1913979) Methylovorus glucosetrophus SIP3-4 8174291 YP_003051577.1 CDS Msip34_1805 NC_012969.1 1914003 1915154 R PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: mfa:Mfla_0982 cupin 4; cupin complement(1914003..1915154) Methylovorus glucosetrophus SIP3-4 8174292 YP_003051578.1 CDS Msip34_1806 NC_012969.1 1915234 1915698 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_0981 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1915234..1915698 Methylovorus glucosetrophus SIP3-4 8174293 YP_003051579.1 CDS Msip34_1807 NC_012969.1 1915709 1916188 D KEGG: mfa:Mfla_0980 fkbp-type peptidyl-prolyl cis-trans isomerase; fkbp-type peptidyl-prolyl cis-trans isomerase 1915709..1916188 Methylovorus glucosetrophus SIP3-4 8174294 YP_003051580.1 CDS Msip34_1810 NC_012969.1 1917747 1919225 D PFAM: polysaccharide biosynthesis protein; KEGG: rle:RL3646 putative transmembrane polysaccharide synthesis protein; polysaccharide biosynthesis protein 1917747..1919225 Methylovorus glucosetrophus SIP3-4 8174297 YP_003051581.1 CDS Msip34_1811 NC_012969.1 1919272 1920168 D PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13250 exopolysaccharide biosynthesis glycosyl transferase; family 2 glycosyl transferase 1919272..1920168 Methylovorus glucosetrophus SIP3-4 8174298 YP_003051582.1 CDS Msip34_1812 NC_012969.1 1920223 1921389 D KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1920223..1921389 Methylovorus glucosetrophus SIP3-4 8174299 YP_003051583.1 CDS Msip34_1813 NC_012969.1 1921545 1923401 D KEGG: mfa:Mfla_1717 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase 1921545..1923401 Methylovorus glucosetrophus SIP3-4 8174300 YP_003051584.1 CDS Msip34_1814 NC_012969.1 1923554 1924549 D PFAM: acyltransferase 3; KEGG: psa:PST_2375 predicted membrane protein; acyltransferase 3 1923554..1924549 Methylovorus glucosetrophus SIP3-4 8174301 YP_003051585.1 CDS Msip34_1815 NC_012969.1 1924631 1924981 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bpt:Bpet4550 arsenate reductase; arsenate reductase 1924631..1924981 Methylovorus glucosetrophus SIP3-4 8174302 YP_003051586.1 CDS Msip34_1816 NC_012969.1 1925023 1926099 R PFAM: acyltransferase 3; KEGG: hch:HCH_01439 acyltransferase; acyltransferase 3 complement(1925023..1926099) Methylovorus glucosetrophus SIP3-4 8172625 YP_003051587.1 CDS Msip34_1817 NC_012969.1 1926197 1928776 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1926197..1928776) Methylovorus glucosetrophus SIP3-4 8173302 YP_003051588.1 CDS Msip34_1818 NC_012969.1 1928904 1929548 D PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2410 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1928904..1929548 Methylovorus glucosetrophus SIP3-4 8173303 YP_003051589.1 CDS Msip34_1819 NC_012969.1 1929558 1930457 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dar:Daro_1735 UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase complement(1929558..1930457) Methylovorus glucosetrophus SIP3-4 8173304 YP_003051590.1 CDS Msip34_1820 NC_012969.1 1930578 1931561 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: ppw:PputW619_2916 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1930578..1931561) Methylovorus glucosetrophus SIP3-4 8173305 YP_003051591.1 CDS Msip34_1821 NC_012969.1 1931595 1933013 R KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(1931595..1933013) Methylovorus glucosetrophus SIP3-4 8173306 YP_003051592.1 CDS Msip34_1822 NC_012969.1 1933061 1933777 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: xfa:XF2360 GumM protein; WecB/TagA/CpsF family glycosyl transferase complement(1933061..1933777) Methylovorus glucosetrophus SIP3-4 8173307 YP_003051593.1 CDS Msip34_1823 NC_012969.1 1933893 1935074 R PFAM: glycosyl transferase family 2; KEGG: ppw:PputW619_2905 glycosyl transferase family protein; family 2 glycosyl transferase complement(1933893..1935074) Methylovorus glucosetrophus SIP3-4 8173308 YP_003051594.1 CDS Msip34_1824 NC_012969.1 1935123 1935524 R PFAM: GtrA family protein; KEGG: ajs:Ajs_0550 GtrA family protein; GtrA family protein complement(1935123..1935524) Methylovorus glucosetrophus SIP3-4 8173309 YP_003051595.1 CDS Msip34_1825 NC_012969.1 1935541 1936740 R PFAM: glycosyl transferase group 1; KEGG: ppg:PputGB1_2716 glycosyl transferase group 1; group 1 glycosyl transferase complement(1935541..1936740) Methylovorus glucosetrophus SIP3-4 8173310 YP_003051596.1 CDS Msip34_1826 NC_012969.1 1936737 1938065 R PFAM: O-antigen polymerase; KEGG: har:HEAR0719 hypothetical protein; O-antigen polymerase complement(1936737..1938065) Methylovorus glucosetrophus SIP3-4 8173311 YP_003051597.1 CDS Msip34_1827 NC_012969.1 1938147 1938995 R PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_6724 glycosyl transferase family protein; family 2 glycosyl transferase complement(1938147..1938995) Methylovorus glucosetrophus SIP3-4 8173312 YP_003051598.1 CDS Msip34_1828 NC_012969.1 1939066 1940367 R KEGG: sde:Sde_3947 hypothetical protein; hypothetical protein complement(1939066..1940367) Methylovorus glucosetrophus SIP3-4 8173313 YP_003051599.1 CDS Msip34_1829 NC_012969.1 1940434 1941258 R KEGG: rle:RL3648 putative galactosyl transferase; putative galactosyl transferase complement(1940434..1941258) Methylovorus glucosetrophus SIP3-4 8173314 YP_003051600.1 CDS Msip34_1830 NC_012969.1 1941338 1942294 R PFAM: glycosyl transferase family 2; KEGG: tgr:Tgr7_2365 glycosyl transferase family protein; family 2 glycosyl transferase complement(1941338..1942294) Methylovorus glucosetrophus SIP3-4 8173315 YP_003051601.1 CDS Msip34_1831 NC_012969.1 1942353 1943258 R PFAM: ExoV-like protein; KEGG: rle:RL3645 putative succinoglycan biosynthesis protein; ExoV-like protein complement(1942353..1943258) Methylovorus glucosetrophus SIP3-4 8173316 YP_003051602.1 CDS Msip34_1832 NC_012969.1 1943296 1943994 R TIGRFAM: EpsI family protein; KEGG: mpt:Mpe_A0721 hypothetical protein; EpsI family protein complement(1943296..1943994) Methylovorus glucosetrophus SIP3-4 8173317 YP_003051603.1 CDS Msip34_1833 NC_012969.1 1943999 1944901 R TIGRFAM: exosortase 2; eight transmembrane protein EpsH; KEGG: lch:Lcho_2352 exosortase 2; exosortase 2 complement(1943999..1944901) Methylovorus glucosetrophus SIP3-4 8173318 YP_003051604.1 CDS Msip34_1834 NC_012969.1 1944971 1945852 R TIGRFAM: chain length determinant protein tyrosine kinase EpsG; capsular exopolysaccharide family; KEGG: mfa:Mfla_2024 protein-tyrosine kinase; chain length determinant protein tyrosine kinase EpsG complement(1944971..1945852) Methylovorus glucosetrophus SIP3-4 8173319 YP_003051605.1 CDS Msip34_1835 NC_012969.1 1945861 1947264 R TIGRFAM: chain length determinant protein EpsF; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis; chain length determinant protein EpsF complement(1945861..1947264) Methylovorus glucosetrophus SIP3-4 8173320 YP_003051606.1 CDS Msip34_1836 NC_012969.1 1947273 1948328 R TIGRFAM: polysaccharide export protein EpsE; PFAM: polysaccharide export protein; KEGG: nmu:Nmul_A0242 polysaccharide export protein; polysaccharide export protein EpsE complement(1947273..1948328) Methylovorus glucosetrophus SIP3-4 8173321 YP_003051607.1 CDS Msip34_1837 NC_012969.1 1948376 1949293 R TIGRFAM: peptidyl-prolyl cis-trans isomerase, EpsD family; KEGG: nmu:Nmul_A0241 hypothetical protein; EpsD family peptidyl-prolyl cis-trans isomerase complement(1948376..1949293) Methylovorus glucosetrophus SIP3-4 8173322 YP_003051608.1 CDS Msip34_1838 NC_012969.1 1949334 1950581 R TIGRFAM: exopolysaccharide biosynthesis operon protein EpsL; KEGG: pol:Bpro_1876 hypothetical protein; exopolysaccharide biosynthesis operon protein EpsL complement(1949334..1950581) Methylovorus glucosetrophus SIP3-4 8173323 YP_003051609.1 CDS Msip34_1839 NC_012969.1 1950599 1951108 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mfa:Mfla_1926 cyclic nucleotide-binding domain-containing protein; putative Crp/Fnr family transcriptional regulator complement(1950599..1951108) Methylovorus glucosetrophus SIP3-4 8173324 YP_003051610.1 CDS Msip34_1840 NC_012969.1 1951620 1952417 D KEGG: mfa:Mfla_1927 LuxR family transcriptional regulator; TIGRFAM: transcriptional regulator EpsA; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 1951620..1952417 Methylovorus glucosetrophus SIP3-4 8173325 YP_003051611.1 CDS Msip34_1841 NC_012969.1 1952414 1953835 D TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: pol:Bpro_1875 sugar transferase; undecaprenyl-phosphate glucose phosphotransferase 1952414..1953835 Methylovorus glucosetrophus SIP3-4 8173326 YP_003051612.1 CDS Msip34_1842 NC_012969.1 1954220 1954792 R PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_2396 hypothetical protein; hypothetical protein complement(1954220..1954792) Methylovorus glucosetrophus SIP3-4 8173327 YP_003051613.1 CDS Msip34_1843 NC_012969.1 1954917 1955726 R PFAM: inositol monophosphatase; KEGG: mfa:Mfla_0813 inositol monophosphatase; inositol monophosphatase complement(1954917..1955726) Methylovorus glucosetrophus SIP3-4 8173328 YP_003051614.1 CDS Msip34_1844 NC_012969.1 1955812 1956588 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_0812 RNA methyltransferase TrmH, group 1; TrmH family RNA methyltransferase 1955812..1956588 Methylovorus glucosetrophus SIP3-4 8173329 YP_003051615.1 CDS Msip34_1845 NC_012969.1 1956611 1957366 D TIGRFAM: serine O-acetyltransferase; KEGG: mfa:Mfla_0811 serine O-acetyltransferase; serine O-acetyltransferase 1956611..1957366 Methylovorus glucosetrophus SIP3-4 8173330 YP_003051616.1 CDS Msip34_1846 NC_012969.1 1957485 1957973 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mfa:Mfla_0810 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1957485..1957973 Methylovorus glucosetrophus SIP3-4 8173331 YP_003051617.1 CDS Msip34_1847 NC_012969.1 1957987 1959144 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_0809 aminotransferase, class V; cysteine desulfurase 1957987..1959144 Methylovorus glucosetrophus SIP3-4 8173332 YP_003051618.1 CDS Msip34_1848 NC_012969.1 1959153 1960367 D KEGG: mfa:Mfla_0808 cysteine desulfurase IscS; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; cysteine desulfurase IscS 1959153..1960367 Methylovorus glucosetrophus SIP3-4 8173333 YP_003051619.1 CDS Msip34_1849 NC_012969.1 1960433 1960831 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mfa:Mfla_0807 scaffold protein; scaffold protein 1960433..1960831 Methylovorus glucosetrophus SIP3-4 8173334 YP_003051620.1 CDS Msip34_1850 NC_012969.1 1960842 1961165 D TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mfa:Mfla_0806 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 1960842..1961165 Methylovorus glucosetrophus SIP3-4 8173335 YP_003051621.1 CDS Msip34_1851 NC_012969.1 1961137 1961763 D KEGG: mfa:Mfla_0805 co-chaperone Hsc20; TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; co-chaperone Hsc20 1961137..1961763 Methylovorus glucosetrophus SIP3-4 8173336 YP_003051622.1 CDS Msip34_1852 NC_012969.1 1961799 1963667 D TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; KEGG: mfa:Mfla_0804 Fe-S protein assembly chaperone HscA; Fe-S protein assembly chaperone HscA 1961799..1963667 Methylovorus glucosetrophus SIP3-4 8173337 YP_003051623.1 CDS Msip34_1853 NC_012969.1 1963669 1964010 D TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: reu:Reut_A1064 ferredoxin, 2Fe-2S type; ferredoxin, 2Fe-2S type, ISC system 1963669..1964010 Methylovorus glucosetrophus SIP3-4 8173338 YP_003051624.1 CDS Msip34_1854 NC_012969.1 1964041 1967421 R KEGG: mfa:Mfla_0802 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1964041..1967421) Methylovorus glucosetrophus SIP3-4 8173339 YP_003051625.1 CDS Msip34_1855 NC_012969.1 1967647 1969050 R KEGG: gur:Gura_3476 hypothetical protein; hypothetical protein complement(1967647..1969050) Methylovorus glucosetrophus SIP3-4 8173340 YP_003051626.1 CDS Msip34_1856 NC_012969.1 1969242 1969814 R PFAM: protein of unknown function DUF583; KEGG: mfa:Mfla_0798 hypothetical protein; hypothetical protein complement(1969242..1969814) Methylovorus glucosetrophus SIP3-4 8173341 YP_003051627.1 CDS Msip34_1857 NC_012969.1 1970091 1971605 R TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mfa:Mfla_0797 lysyl-tRNA synthetase; lysyl-tRNA synthetase complement(1970091..1971605) Methylovorus glucosetrophus SIP3-4 8173342 YP_003051628.1 CDS Msip34_1859 NC_012969.1 1972905 1973909 D TIGRFAM: phosphate binding protein; KEGG: mfa:Mfla_0795 phosphate binding protein; phosphate-binding protein 1972905..1973909 Methylovorus glucosetrophus SIP3-4 8173344 YP_003051629.1 CDS Msip34_1860 NC_012969.1 1973909 1974943 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0794 phosphate ABC transporter permease; phosphate ABC transporter permease 1973909..1974943 Methylovorus glucosetrophus SIP3-4 8173345 YP_003051630.1 CDS Msip34_1861 NC_012969.1 1974947 1975885 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0793 phosphate ABC transporter permease; phosphate ABC transporter permease 1974947..1975885 Methylovorus glucosetrophus SIP3-4 8173346 YP_003051631.1 CDS Msip34_1862 NC_012969.1 1975946 1976725 D KEGG: mfa:Mfla_0792 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 1975946..1976725 Methylovorus glucosetrophus SIP3-4 8173347 YP_003051632.1 CDS Msip34_1863 NC_012969.1 1976815 1978068 R PFAM: FAD dependent oxidoreductase; KEGG: bac:BamMC406_0944 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(1976815..1978068) Methylovorus glucosetrophus SIP3-4 8173348 YP_003051633.1 CDS Msip34_1864 NC_012969.1 1978186 1979340 R PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0790 1,2-diacylglycerol 3-glucosyltransferase; group 1 glycosyl transferase complement(1978186..1979340) Methylovorus glucosetrophus SIP3-4 8173349 YP_003051634.1 CDS Msip34_1865 NC_012969.1 1979471 1980172 D KEGG: mfa:Mfla_0789 hypothetical protein; hypothetical protein 1979471..1980172 Methylovorus glucosetrophus SIP3-4 8173350 YP_003051635.1 CDS Msip34_1866 NC_012969.1 1980204 1980572 R PFAM: diacylglycerol kinase; KEGG: mfa:Mfla_0788 diacylglycerol kinase; diacylglycerol kinase complement(1980204..1980572) Methylovorus glucosetrophus SIP3-4 8173351 YP_003051636.1 CDS Msip34_1867 NC_012969.1 1980720 1981568 D KEGG: mfa:Mfla_0787 hypothetical protein; hypothetical protein 1980720..1981568 Methylovorus glucosetrophus SIP3-4 8173352 YP_003051637.1 CDS Msip34_1868 NC_012969.1 1981601 1982038 R KEGG: msl:Msil_3517 hypothetical protein; hypothetical protein complement(1981601..1982038) Methylovorus glucosetrophus SIP3-4 8173353 YP_003051638.1 CDS Msip34_1869 NC_012969.1 1982209 1983222 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: msl:Msil_3516 transcriptional regulator, AraC family; AraC family transcriptional regulator 1982209..1983222 Methylovorus glucosetrophus SIP3-4 8173354 YP_003051639.1 CDS Msip34_1870 NC_012969.1 1983266 1983799 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: mfa:Mfla_0786 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(1983266..1983799) Methylovorus glucosetrophus SIP3-4 8173355 YP_003051640.1 CDS Msip34_1871 NC_012969.1 1984002 1985360 R KEGG: mfa:Mfla_0785 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucosamine mutase complement(1984002..1985360) Methylovorus glucosetrophus SIP3-4 8173356 YP_003051641.1 CDS Msip34_1872 NC_012969.1 1985466 1986287 R KEGG: mfa:Mfla_0784 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(1985466..1986287) Methylovorus glucosetrophus SIP3-4 8173357 YP_003051642.1 CDS Msip34_1873 NC_012969.1 1986352 1988247 R KEGG: mfa:Mfla_0783 membrane protease FtsH catalytic subunit; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(1986352..1988247) Methylovorus glucosetrophus SIP3-4 8173358 YP_003051643.1 CDS Msip34_1874 NC_012969.1 1988320 1988943 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mfa:Mfla_0782 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(1988320..1988943) Methylovorus glucosetrophus SIP3-4 8173359 YP_003051644.1 CDS Msip34_1875 NC_012969.1 1989061 1989354 D PFAM: protein of unknown function UPF0044; KEGG: cvi:CV_3799 hypothetical protein; hypothetical protein 1989061..1989354 Methylovorus glucosetrophus SIP3-4 8173360 YP_003051645.1 CDS Msip34_1876 NC_012969.1 1989380 1989832 R KEGG: mfa:Mfla_0781 hypothetical protein; hypothetical protein complement(1989380..1989832) Methylovorus glucosetrophus SIP3-4 8173361 YP_003051646.1 CDS Msip34_1877 NC_012969.1 1989849 1990325 R TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_0780 GreA/GreB family elongation factor; transcription elongation factor GreA complement(1989849..1990325) Methylovorus glucosetrophus SIP3-4 8173362 YP_003051647.1 CDS Msip34_1878 NC_012969.1 1990411 1993620 R TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mfa:Mfla_0779 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase large subunit complement(1990411..1993620) Methylovorus glucosetrophus SIP3-4 8173363 YP_003051648.1 CDS Msip34_1879 NC_012969.1 1993699 1994835 R TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: mfa:Mfla_0778 carbamoyl-phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit complement(1993699..1994835) Methylovorus glucosetrophus SIP3-4 8173364 YP_003051649.1 CDS Msip34_1880 NC_012969.1 1995062 1995868 R KEGG: mfa:Mfla_0777 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(1995062..1995868) Methylovorus glucosetrophus SIP3-4 8173365 YP_003051650.1 CDS Msip34_1881 NC_012969.1 1995954 1996799 R PFAM: SmpA/OmlA domain protein; KEGG: mfa:Mfla_0776 SmpA/OmlA; SmpA/OmlA domain-containing protein complement(1995954..1996799) Methylovorus glucosetrophus SIP3-4 8173366 YP_003051651.1 CDS Msip34_1882 NC_012969.1 1996886 1997308 D PFAM: ferric-uptake regulator; KEGG: dar:Daro_0934 ferric uptake regulator family protein; Fur family ferric uptake regulator 1996886..1997308 Methylovorus glucosetrophus SIP3-4 8173367 YP_003051652.1 CDS Msip34_1883 NC_012969.1 1997312 1998967 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mfa:Mfla_0775 DNA repair protein RecN; DNA repair protein RecN complement(1997312..1998967) Methylovorus glucosetrophus SIP3-4 8173368 YP_003051653.1 CDS Msip34_1884 NC_012969.1 1998996 1999868 R PFAM: ATP-NAD/AcoX kinase; KEGG: mfa:Mfla_0774 NAD(+) kinase; NAD(+) kinase complement(1998996..1999868) Methylovorus glucosetrophus SIP3-4 8173369 YP_003051654.1 CDS hrcA NC_012969.1 2000274 2001299 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 2000274..2001299 Methylovorus glucosetrophus SIP3-4 8173370 YP_003051655.1 CDS Msip34_1886 NC_012969.1 2001302 2002222 D PFAM: type IV pilus assembly PilZ; KEGG: mmw:Mmwyl1_2279 hypothetical protein; type IV pilus assembly PilZ 2001302..2002222 Methylovorus glucosetrophus SIP3-4 8173371 YP_003051656.1 CDS Msip34_1887 NC_012969.1 2002229 2003338 D KEGG: mfa:Mfla_0772 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase 2002229..2003338 Methylovorus glucosetrophus SIP3-4 8173372 YP_003051657.1 CDS Msip34_1888 NC_012969.1 2003539 2004519 D TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mfa:Mfla_0771 ADP-glyceromanno-heptose 6-epimerase precursor; ADP-L-glycero-D-manno-heptose-6-epimerase 2003539..2004519 Methylovorus glucosetrophus SIP3-4 8173373 YP_003051658.1 CDS Msip34_1889 NC_012969.1 2004531 2005094 D PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_0770 phosphoheptose isomerase; sugar isomerase (SIS) 2004531..2005094 Methylovorus glucosetrophus SIP3-4 8173374 YP_003051659.1 CDS Msip34_1890 NC_012969.1 2005097 2006563 D TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: mfa:Mfla_0769 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase; bifunctional protein RfaE 2005097..2006563 Methylovorus glucosetrophus SIP3-4 8173375 YP_003051660.1 CDS Msip34_1891 NC_012969.1 2006572 2007588 D TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: mfa:Mfla_0768 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 2006572..2007588 Methylovorus glucosetrophus SIP3-4 8173376 YP_003051661.1 CDS Msip34_1892 NC_012969.1 2007606 2009165 D KEGG: mfa:Mfla_0767 hypothetical protein; hypothetical protein 2007606..2009165 Methylovorus glucosetrophus SIP3-4 8173377 YP_003051662.1 CDS Msip34_1893 NC_012969.1 2009217 2010314 R PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0763 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2009217..2010314) Methylovorus glucosetrophus SIP3-4 8173378 YP_003051663.1 CDS Msip34_1894 NC_012969.1 2010319 2011014 R KEGG: mfa:Mfla_0762 toluene tolerance protein, putative; toluene tolerance protein complement(2010319..2011014) Methylovorus glucosetrophus SIP3-4 8173379 YP_003051664.1 CDS Msip34_1895 NC_012969.1 2011011 2011673 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0761 haloacid dehalogenase-like hydrolase; haloacid dehalogenase domain-containing protein hydrolase complement(2011011..2011673) Methylovorus glucosetrophus SIP3-4 8173380 YP_003051665.1 CDS Msip34_1896 NC_012969.1 2011780 2012406 R KEGG: mfa:Mfla_0760 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2011780..2012406) Methylovorus glucosetrophus SIP3-4 8173381 YP_003051666.1 CDS Msip34_1897 NC_012969.1 2012510 2014324 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(2012510..2014324) Methylovorus glucosetrophus SIP3-4 8174625 YP_003051667.1 CDS Msip34_1898 NC_012969.1 2014456 2016186 R PFAM: Carbamoyltransferase; KEGG: mfa:Mfla_0758 carbamoyltransferase; carbamoyltransferase complement(2014456..2016186) Methylovorus glucosetrophus SIP3-4 8172142 YP_003051668.1 CDS Msip34_1899 NC_012969.1 2016197 2017681 R PFAM: lipopolysaccharide kinase; KEGG: mfa:Mfla_0757 hypothetical protein; Mn2+dependent serine/threonine protein kinase complement(2016197..2017681) Methylovorus glucosetrophus SIP3-4 8172143 YP_003051669.1 CDS Msip34_1900 NC_012969.1 2017728 2018534 R KEGG: pfo:Pfl01_2033 hypothetical protein; hypothetical protein complement(2017728..2018534) Methylovorus glucosetrophus SIP3-4 8172144 YP_003051670.1 CDS Msip34_1901 NC_012969.1 2018629 2019414 R PFAM: lipopolysaccharide kinase; KEGG: azo:azo3570 lipopolysaccharide core biosynthesis protein; lipopolysaccharide kinase complement(2018629..2019414) Methylovorus glucosetrophus SIP3-4 8172145 YP_003051671.1 CDS Msip34_1902 NC_012969.1 2019438 2020268 R PFAM: lipopolysaccharide kinase; KEGG: mfa:Mfla_0755 lipopolysaccharide kinase; lipopolysaccharide kinase complement(2019438..2020268) Methylovorus glucosetrophus SIP3-4 8172146 YP_003051672.1 CDS Msip34_1903 NC_012969.1 2020265 2021407 R PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0754 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2020265..2021407) Methylovorus glucosetrophus SIP3-4 8172147 YP_003051673.1 CDS Msip34_1904 NC_012969.1 2021529 2022512 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: mfa:Mfla_0753 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 2021529..2022512 Methylovorus glucosetrophus SIP3-4 8172148 YP_003051674.1 CDS Msip34_1905 NC_012969.1 2022609 2023133 D PFAM: GrpE protein; KEGG: mfa:Mfla_0752 GrpE protein; GrpE protein HSP-70 cofactor 2022609..2023133 Methylovorus glucosetrophus SIP3-4 8172149 YP_003051675.1 CDS Msip34_1906 NC_012969.1 2023327 2025252 D TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: mfa:Mfla_0751 chaperone DnaK; chaperone protein DnaK 2023327..2025252 Methylovorus glucosetrophus SIP3-4 8172150 YP_003051676.1 CDS Msip34_1907 NC_012969.1 2025391 2026512 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2025391..2026512 Methylovorus glucosetrophus SIP3-4 8172151 YP_003051677.1 CDS Msip34_1908 NC_012969.1 2026643 2027680 R PFAM: glycosyl transferase family 9; KEGG: noc:Noc_0578 glycosyl transferase family protein; glycosyl transferase family protein complement(2026643..2027680) Methylovorus glucosetrophus SIP3-4 8172152 YP_003051678.1 CDS Msip34_1909 NC_012969.1 2027801 2029069 D PFAM: O-antigen polymerase; KEGG: tgr:Tgr7_2080 O-antigen polymerase; O-antigen polymerase 2027801..2029069 Methylovorus glucosetrophus SIP3-4 8172153 YP_003051679.1 CDS Msip34_1910 NC_012969.1 2029103 2030017 R PFAM: glycosyl transferase family 9; KEGG: pla:Plav_1688 glycosyl transferase family protein; glycosyl transferase family protein complement(2029103..2030017) Methylovorus glucosetrophus SIP3-4 8172154 YP_003051680.1 CDS Msip34_1911 NC_012969.1 2030057 2031070 R PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_0797 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2030057..2031070) Methylovorus glucosetrophus SIP3-4 8172155 YP_003051681.1 CDS Msip34_1912 NC_012969.1 2031067 2032203 R PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_0467 glycosyl transferase group 1; group 1 glycosyl transferase complement(2031067..2032203) Methylovorus glucosetrophus SIP3-4 8172156 YP_003051682.1 CDS Msip34_1913 NC_012969.1 2032214 2033212 R PFAM: protein of unknown function DUF1022; KEGG: noc:Noc_0559 hypothetical protein; hypothetical protein complement(2032214..2033212) Methylovorus glucosetrophus SIP3-4 8172157 YP_003051683.1 CDS Msip34_1914 NC_012969.1 2033407 2035101 R TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: mfa:Mfla_0748 2-isopropylmalate synthase; 2-isopropylmalate synthase complement(2033407..2035101) Methylovorus glucosetrophus SIP3-4 8172158 YP_003051684.1 CDS Msip34_1915 NC_012969.1 2035462 2036457 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mfa:Mfla_0746 alpha/beta hydrolase fold-3; Alpha/beta hydrolase fold-3 domain-containing protein complement(2035462..2036457) Methylovorus glucosetrophus SIP3-4 8172159 YP_003051685.1 CDS Msip34_1916 NC_012969.1 2036665 2037054 R KEGG: mfa:Mfla_0739 glyoxalase I; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(2036665..2037054) Methylovorus glucosetrophus SIP3-4 8172160 YP_003051686.1 CDS Msip34_1917 NC_012969.1 2037136 2038905 R PFAM: extracellular solute-binding protein family 3; chemotaxis sensory transducer; SMART: extracellular solute-binding protein family 3; chemotaxis sensory transducer; KEGG: tgr:Tgr7_2287 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2037136..2038905) Methylovorus glucosetrophus SIP3-4 8172161 YP_003051687.1 CDS Msip34_1918 NC_012969.1 2039029 2039280 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pag:PLES_03591 ferredoxin; 4Fe-4S ferredoxin complement(2039029..2039280) Methylovorus glucosetrophus SIP3-4 8172162 YP_003051688.1 CDS Msip34_1919 NC_012969.1 2039290 2039805 R KEGG: mfa:Mfla_0737 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase complement(2039290..2039805) Methylovorus glucosetrophus SIP3-4 8172163 YP_003051689.1 CDS Msip34_1920 NC_012969.1 2039792 2040436 R KEGG: mfa:Mfla_0736 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; methyltransferase complement(2039792..2040436) Methylovorus glucosetrophus SIP3-4 8172164 YP_003051690.1 CDS Msip34_1921 NC_012969.1 2040375 2041691 R PFAM: peptidase M16 domain protein; KEGG: mfa:Mfla_0735 peptidase M16-like protein; peptidase M16 domain-containing protein complement(2040375..2041691) Methylovorus glucosetrophus SIP3-4 8172165 YP_003051691.1 CDS Msip34_1922 NC_012969.1 2041760 2043109 R PFAM: peptidase M16 domain protein; KEGG: mfa:Mfla_0734 peptidase M16-like protein; peptidase M16 domain-containing protein complement(2041760..2043109) Methylovorus glucosetrophus SIP3-4 8172166 YP_003051692.1 CDS Msip34_1923 NC_012969.1 2043415 2044440 D KEGG: mfa:Mfla_0733 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 2043415..2044440 Methylovorus glucosetrophus SIP3-4 8172167 YP_003051693.1 CDS Msip34_1924 NC_012969.1 2044474 2045127 D KEGG: mfa:Mfla_0732 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 2044474..2045127 Methylovorus glucosetrophus SIP3-4 8172168 YP_003051694.1 CDS Msip34_1925 NC_012969.1 2045124 2046026 D PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_0731 cell division protein FtsX; hypothetical protein 2045124..2046026 Methylovorus glucosetrophus SIP3-4 8172169 YP_003051695.1 CDS Msip34_1926 NC_012969.1 2046047 2046649 D KEGG: mfa:Mfla_1358 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2046047..2046649 Methylovorus glucosetrophus SIP3-4 8172170 YP_003051696.1 CDS Msip34_1927 NC_012969.1 2046765 2047541 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0729 oxidoreductase FAD-binding region; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(2046765..2047541) Methylovorus glucosetrophus SIP3-4 8172171 YP_003051697.1 CDS Msip34_1928 NC_012969.1 2047578 2048504 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mfa:Mfla_0728 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunits alpha/beta complement(2047578..2048504) Methylovorus glucosetrophus SIP3-4 8172172 YP_003051698.1 CDS Msip34_1929 NC_012969.1 2048501 2049250 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mfa:Mfla_0727 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunits alpha/beta complement(2048501..2049250) Methylovorus glucosetrophus SIP3-4 8172173 YP_003051699.1 CDS Msip34_1930 NC_012969.1 2049346 2050272 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_0726 LysR family transcriptional regulator; LysR family transcriptional regulator 2049346..2050272 Methylovorus glucosetrophus SIP3-4 8172174 YP_003051700.1 CDS Msip34_1931 NC_012969.1 2050311 2051960 D PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase; KEGG: mfa:Mfla_0725 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 2050311..2051960 Methylovorus glucosetrophus SIP3-4 8172175 YP_003051701.1 CDS Msip34_1932 NC_012969.1 2052075 2052416 D TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: maq:Maqu_2184 alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA 2052075..2052416 Methylovorus glucosetrophus SIP3-4 8172176 YP_003051702.1 CDS Msip34_1933 NC_012969.1 2052458 2053105 D PFAM: thiopurine S-methyltransferase; KEGG: cps:CPS_3096 thiopurine S-methyltransferase family protein; Thiopurine S-methyltransferase 2052458..2053105 Methylovorus glucosetrophus SIP3-4 8172177 YP_003051703.1 CDS Msip34_1934 NC_012969.1 2053135 2053581 D hypothetical protein 2053135..2053581 Methylovorus glucosetrophus SIP3-4 8172178 YP_003051704.1 CDS Msip34_1935 NC_012969.1 2053703 2054137 D KEGG: pat:Patl_1983 hypothetical protein; hypothetical protein 2053703..2054137 Methylovorus glucosetrophus SIP3-4 8172179 YP_003051705.1 CDS Msip34_1936 NC_012969.1 2054272 2054409 R hypothetical protein complement(2054272..2054409) Methylovorus glucosetrophus SIP3-4 8172180 YP_003051706.1 CDS Msip34_1937 NC_012969.1 2054707 2055810 D PFAM: phosphate-selective porin O and P; KEGG: tcx:Tcr_1417 hypothetical protein; phosphate-selective porin O and P 2054707..2055810 Methylovorus glucosetrophus SIP3-4 8172181 YP_003051707.1 CDS Msip34_1938 NC_012969.1 2056076 2057347 D KEGG: abc:ACICU_03420 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; O-acetylhomoserine/O-acetylserine sulfhydrylase 2056076..2057347 Methylovorus glucosetrophus SIP3-4 8172182 YP_003051708.1 CDS Msip34_1939 NC_012969.1 2057429 2057998 D KEGG: azo:azo2388 hypothetical protein; hypothetical protein 2057429..2057998 Methylovorus glucosetrophus SIP3-4 8172183 YP_003051709.1 CDS Msip34_1940 NC_012969.1 2058160 2058567 D KEGG: rpe:RPE_4432 hypothetical protein; hypothetical protein 2058160..2058567 Methylovorus glucosetrophus SIP3-4 8172184 YP_003051710.1 CDS Msip34_1941 NC_012969.1 2058696 2059445 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_0254 ABC transporter related; ABC transporter-like protein complement(2058696..2059445) Methylovorus glucosetrophus SIP3-4 8172185 YP_003051711.1 CDS Msip34_1942 NC_012969.1 2059610 2060962 R KEGG: pfs:PFLU3423 hypothetical protein; hypothetical protein complement(2059610..2060962) Methylovorus glucosetrophus SIP3-4 8172186 YP_003051712.1 CDS Msip34_1943 NC_012969.1 2061130 2062197 R PFAM: inner-membrane translocator; KEGG: pna:Pnap_0551 inner-membrane translocator; inner-membrane translocator complement(2061130..2062197) Methylovorus glucosetrophus SIP3-4 8172187 YP_003051713.1 CDS Msip34_1944 NC_012969.1 2062207 2063088 R PFAM: inner-membrane translocator; KEGG: pna:Pnap_0550 inner-membrane translocator; inner-membrane translocator complement(2062207..2063088) Methylovorus glucosetrophus SIP3-4 8172188 YP_003051714.1 CDS Msip34_1945 NC_012969.1 2063135 2063905 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0549 ABC transporter related; ABC transporter-like protein complement(2063135..2063905) Methylovorus glucosetrophus SIP3-4 8172189 YP_003051715.1 CDS Msip34_1946 NC_012969.1 2063902 2065143 R KEGG: avn:Avin_43550 long-chain-fatty-acid--CoA ligase-related protein; long-chain-fatty-acid--CoA ligase-like protein complement(2063902..2065143) Methylovorus glucosetrophus SIP3-4 8172190 YP_003051716.1 CDS Msip34_1947 NC_012969.1 2065167 2066264 R PFAM: Luciferase-like monooxygenase; KEGG: avn:Avin_43560 dimethyl sulfone monooxygenase; SfnG; luciferase-like monooxygenase complement(2065167..2066264) Methylovorus glucosetrophus SIP3-4 8172191 YP_003051717.1 CDS Msip34_1948 NC_012969.1 2066307 2066903 R PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_6034 FMN reductase; FMN reductase complement(2066307..2066903) Methylovorus glucosetrophus SIP3-4 8172192 YP_003051718.1 CDS Msip34_1949 NC_012969.1 2067350 2068585 D PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_C7712 acyl-CoA dehydrogenase, central region; acyl-CoA dehydrogenase type 2 domain-containing protein 2067350..2068585 Methylovorus glucosetrophus SIP3-4 8172193 YP_003051719.1 CDS Msip34_1950 NC_012969.1 2068772 2069449 D PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: mms:mma_0049 TetR family transcriptional regulator; TetR family transcriptional regulator 2068772..2069449 Methylovorus glucosetrophus SIP3-4 8172194 YP_003051720.1 CDS Msip34_1951 NC_012969.1 2069446 2070894 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS05806 putative outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 2069446..2070894 Methylovorus glucosetrophus SIP3-4 8172195 YP_003051721.1 CDS Msip34_1952 NC_012969.1 2070891 2071976 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_4105 secretion protein HlyD; RND family efflux transporter MFP subunit 2070891..2071976 Methylovorus glucosetrophus SIP3-4 8172196 YP_003051722.1 CDS Msip34_1953 NC_012969.1 2071987 2075070 D PFAM: acriflavin resistance protein; KEGG: mms:mma_0052 cation/multidrug efflux pump; acriflavin resistance protein 2071987..2075070 Methylovorus glucosetrophus SIP3-4 8172197 YP_003051723.1 CDS Msip34_1954 NC_012969.1 2075112 2076023 R PFAM: amidohydrolase 2; KEGG: avn:Avin_43860 amidohydrolase; amidohydrolase 2 complement(2075112..2076023) Methylovorus glucosetrophus SIP3-4 8172198 YP_003051724.1 CDS Msip34_1955 NC_012969.1 2076071 2077273 R PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_0557 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein complement(2076071..2077273) Methylovorus glucosetrophus SIP3-4 8172199 YP_003051725.1 CDS Msip34_1956 NC_012969.1 2077283 2078428 R PFAM: Luciferase-like monooxygenase; KEGG: psp:PSPPH_3167 alkanesulfonate monooxygenase family protein; alkanesulfonate monooxygenase complement(2077283..2078428) Methylovorus glucosetrophus SIP3-4 8172200 YP_003051726.1 CDS Msip34_1957 NC_012969.1 2078866 2080074 D PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pap:PSPA7_2907 putative FMNH2-dependent monooxygenase; acyl-CoA dehydrogenase type 2 domain-containing protein 2078866..2080074 Methylovorus glucosetrophus SIP3-4 8172201 YP_003051727.1 CDS Msip34_1958 NC_012969.1 2080146 2081198 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0881 sigma-54 dependent trancsriptional regulator; Fis family sigma-54 specific transcriptional regulator 2080146..2081198 Methylovorus glucosetrophus SIP3-4 8172202 YP_003051728.1 CDS Msip34_1959 NC_012969.1 2081185 2081811 D KEGG: mfa:Mfla_1358 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2081185..2081811 Methylovorus glucosetrophus SIP3-4 8172203 YP_003051729.1 CDS Msip34_1960 NC_012969.1 2081824 2084121 R KEGG: swd:Swoo_3507 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; diguanylate cyclase/phosphodiesterase complement(2081824..2084121) Methylovorus glucosetrophus SIP3-4 8172204 YP_003051730.1 CDS Msip34_1961 NC_012969.1 2084621 2085556 D PFAM: Patatin; KEGG: wpi:WPa_0272 patatin family protein; patatin 2084621..2085556 Methylovorus glucosetrophus SIP3-4 8172205 YP_003051731.1 CDS Msip34_1962 NC_012969.1 2085588 2086076 R KEGG: vvy:VV1695 hypothetical protein; hypothetical protein complement(2085588..2086076) Methylovorus glucosetrophus SIP3-4 8172206 YP_003051732.1 CDS Msip34_1963 NC_012969.1 2086580 2088676 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0109 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2086580..2088676 Methylovorus glucosetrophus SIP3-4 8172207 YP_003051733.1 CDS Msip34_1964 NC_012969.1 2088753 2089940 R PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1035 twin-arginine translocation pathway signal; major facilitator superfamily protein complement(2088753..2089940) Methylovorus glucosetrophus SIP3-4 8172208 YP_003051734.1 CDS Msip34_1965 NC_012969.1 2090262 2090447 D KEGG: involved in cytoskeletal control; K11238 cytokinesis protein; hypothetical protein 2090262..2090447 Methylovorus glucosetrophus SIP3-4 8172209 YP_003051735.1 CDS Msip34_1966 NC_012969.1 2090552 2091037 R KEGG: psa:PST_1628 hypothetical protein; hypothetical protein complement(2090552..2091037) Methylovorus glucosetrophus SIP3-4 8172210 YP_003051736.1 CDS Msip34_1967 NC_012969.1 2091052 2092818 R PFAM: sulfatase; KEGG: mfa:Mfla_0756 hypothetical protein; hypothetical protein complement(2091052..2092818) Methylovorus glucosetrophus SIP3-4 8172211 YP_003051737.1 CDS Msip34_1968 NC_012969.1 2093280 2094572 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mms:mma_0763 sensory box protein; diguanylate phosphodiesterase 2093280..2094572 Methylovorus glucosetrophus SIP3-4 8172212 YP_003051738.1 CDS Msip34_1969 NC_012969.1 2094695 2095246 R PFAM: NADPH-dependent FMN reductase; KEGG: mfa:Mfla_1569 NADPH-dependent FMN reductase; FMN reductase complement(2094695..2095246) Methylovorus glucosetrophus SIP3-4 8172213 YP_003051739.1 CDS Msip34_1970 NC_012969.1 2095423 2095905 R PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein; N-acetyltransferase GCN5 complement(2095423..2095905) Methylovorus glucosetrophus SIP3-4 8172214 YP_003051740.1 CDS Msip34_1971 NC_012969.1 2095927 2096532 R PFAM: protein of unknown function DUF330; KEGG: eca:ECA1563 putative lipoprotein; hypothetical protein complement(2095927..2096532) Methylovorus glucosetrophus SIP3-4 8172215 YP_003051741.1 CDS Msip34_1972 NC_012969.1 2096529 2098229 R PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_C6816 paraquat-inducible protein B'; mammalian cell entry domain-containing protein complement(2096529..2098229) Methylovorus glucosetrophus SIP3-4 8172216 YP_003051742.1 CDS Msip34_1973 NC_012969.1 2098226 2098882 R PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_C6817 paraquat-inducible protein A; Paraquat-inducible protein A complement(2098226..2098882) Methylovorus glucosetrophus SIP3-4 8172217 YP_003051743.1 CDS Msip34_1974 NC_012969.1 2098879 2099508 R PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_C6818 paraquat-inducible protein A; Paraquat-inducible protein A complement(2098879..2099508) Methylovorus glucosetrophus SIP3-4 8172218 YP_003051744.1 CDS Msip34_1975 NC_012969.1 2099508 2099606 R hypothetical protein complement(2099508..2099606) Methylovorus glucosetrophus SIP3-4 8172219 YP_003051745.1 CDS Msip34_1976 NC_012969.1 2099745 2100596 R KEGG: rso:RSc3165 hypothetical protein; hypothetical protein complement(2099745..2100596) Methylovorus glucosetrophus SIP3-4 8172220 YP_003051746.1 CDS Msip34_1977 NC_012969.1 2100678 2102897 R TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein; outer membrane autotransporter barrel domain-containing protein complement(2100678..2102897) Methylovorus glucosetrophus SIP3-4 8172221 YP_003051747.1 CDS Msip34_1978 NC_012969.1 2103833 2104267 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_3006 protein of unknown function DUF6, transmembrane; hypothetical protein 2103833..2104267 Methylovorus glucosetrophus SIP3-4 8173031 YP_003051748.1 CDS Msip34_1979 NC_012969.1 2104264 2104368 D hypothetical protein 2104264..2104368 Methylovorus glucosetrophus SIP3-4 8173032 YP_003051749.1 CDS Msip34_1980 NC_012969.1 2104365 2105612 D KEGG: rfr:Rfer_1218 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 2104365..2105612 Methylovorus glucosetrophus SIP3-4 8173033 YP_003051750.1 CDS Msip34_1981 NC_012969.1 2105653 2105820 D hypothetical protein 2105653..2105820 Methylovorus glucosetrophus SIP3-4 8173034 YP_003051751.1 CDS Msip34_1982 NC_012969.1 2105937 2106533 D KEGG: dat:HRM2_39270 hypothetical protein; hypothetical protein 2105937..2106533 Methylovorus glucosetrophus SIP3-4 8173035 YP_003051752.1 CDS Msip34_1983 NC_012969.1 2106761 2107486 D PFAM: class II aldolase/adducin family protein; KEGG: sfu:Sfum_2465 class II aldolase/adducin family protein; class II aldolase/adducin family protein 2106761..2107486 Methylovorus glucosetrophus SIP3-4 8173036 YP_003051753.1 CDS Msip34_1984 NC_012969.1 2107628 2109355 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mms:mma_1390 ABC transporter, ATP-binding/permease fusion protein, type I secretion pathway; ABC transporter-like protein complement(2107628..2109355) Methylovorus glucosetrophus SIP3-4 8173037 YP_003051754.1 CDS Msip34_1985 NC_012969.1 2109327 2115044 R KEGG: rec:RHECIAT_CH0000808 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; putative rhizobiocin/RTX toxin and hemolysin-type calcium-binding protein complement(2109327..2115044) Methylovorus glucosetrophus SIP3-4 8173038 YP_003051755.1 CDS Msip34_1986 NC_012969.1 2115044 2116564 R KEGG: mms:mma_1389 hypothetical protein; hypothetical protein complement(2115044..2116564) Methylovorus glucosetrophus SIP3-4 8173039 YP_003051756.1 CDS Msip34_1987 NC_012969.1 2116661 2117980 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1388 HlyD family secretion protein; HlyD family type I secretion membrane fusion protein complement(2116661..2117980) Methylovorus glucosetrophus SIP3-4 8173040 YP_003051757.1 CDS Msip34_1988 NC_012969.1 2117977 2118660 R KEGG: mms:mma_1387 hypothetical protein; hypothetical protein complement(2117977..2118660) Methylovorus glucosetrophus SIP3-4 8173041 YP_003051758.1 CDS Msip34_1989 NC_012969.1 2118663 2120282 R PFAM: outer membrane efflux protein; KEGG: mms:mma_1386 hypothetical protein; outer membrane efflux protein complement(2118663..2120282) Methylovorus glucosetrophus SIP3-4 8173042 YP_003051759.1 CDS Msip34_1990 NC_012969.1 2120667 2121167 D PFAM: Bet v I allergen; KEGG: azo:azo2022 hypothetical protein; Bet v I allergen 2120667..2121167 Methylovorus glucosetrophus SIP3-4 8173043 YP_003051760.1 CDS Msip34_1991 NC_012969.1 2121210 2121764 R PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0309 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2121210..2121764) Methylovorus glucosetrophus SIP3-4 8173044 YP_003051761.1 CDS Msip34_1992 NC_012969.1 2121754 2122554 R KEGG: mfa:Mfla_0308 hypothetical protein; hypothetical protein complement(2121754..2122554) Methylovorus glucosetrophus SIP3-4 8173045 YP_003051762.1 CDS Msip34_1993 NC_012969.1 2122796 2123650 D TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mfa:Mfla_0702 sigma 32 (RpoH); RNA polymerase sigma-32 subunit RpoH 2122796..2123650 Methylovorus glucosetrophus SIP3-4 8173046 YP_003051763.1 CDS Msip34_1994 NC_012969.1 2123805 2123915 R hypothetical protein complement(2123805..2123915) Methylovorus glucosetrophus SIP3-4 8173047 YP_003051764.1 CDS Msip34_1995 NC_012969.1 2123941 2124147 R TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: mfa:Mfla_0701 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(2123941..2124147) Methylovorus glucosetrophus SIP3-4 8173048 YP_003051765.1 CDS Msip34_1996 NC_012969.1 2124144 2126108 R KEGG: mfa:Mfla_0700 hypothetical protein; hypothetical protein complement(2124144..2126108) Methylovorus glucosetrophus SIP3-4 8173049 YP_003051766.1 CDS Msip34_1997 NC_012969.1 2126321 2126707 D PFAM: protein of unknown function DUF971; KEGG: mfa:Mfla_0699 hypothetical protein; hypothetical protein 2126321..2126707 Methylovorus glucosetrophus SIP3-4 8173050 YP_003051767.1 CDS Msip34_1998 NC_012969.1 2126718 2127455 D TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mfa:Mfla_0698 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 2126718..2127455 Methylovorus glucosetrophus SIP3-4 8173051 YP_003051768.1 CDS Msip34_1999 NC_012969.1 2127452 2128051 D KEGG: mfa:Mfla_0697 hypothetical protein; hypothetical protein 2127452..2128051 Methylovorus glucosetrophus SIP3-4 8173052 YP_003051769.1 CDS ubiB NC_012969.1 2128104 2129624 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 2128104..2129624 Methylovorus glucosetrophus SIP3-4 8173053 YP_003051770.1 CDS Msip34_2001 NC_012969.1 2129717 2130541 R PFAM: Metal-dependent hydrolase HDOD; KEGG: neu:NE1858 hypothetical protein; metal-dependent hydrolase HDOD complement(2129717..2130541) Methylovorus glucosetrophus SIP3-4 8173054 YP_003051771.1 CDS Msip34_2002 NC_012969.1 2130846 2132351 D PFAM: Na+/solute symporter; KEGG: mfa:Mfla_0695 Na+/solute symporter; Na+/solute symporter 2130846..2132351 Methylovorus glucosetrophus SIP3-4 8173055 YP_003051772.1 CDS Msip34_2003 NC_012969.1 2132355 2133173 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(2132355..2133173) Methylovorus glucosetrophus SIP3-4 8173056 YP_003051773.1 CDS Msip34_2004 NC_012969.1 2133182 2134069 R KEGG: mfa:Mfla_0685 hypothetical protein; hypothetical protein complement(2133182..2134069) Methylovorus glucosetrophus SIP3-4 8173057 YP_003051774.1 CDS Msip34_2005 NC_012969.1 2134066 2135454 R KEGG: mfa:Mfla_0684 hypothetical protein; hypothetical protein complement(2134066..2135454) Methylovorus glucosetrophus SIP3-4 8173058 YP_003051775.1 CDS Msip34_2006 NC_012969.1 2135467 2136213 R KEGG: mfa:Mfla_0683 ABC transporter, permease protein, putative; ABC transporter permease complement(2135467..2136213) Methylovorus glucosetrophus SIP3-4 8173059 YP_003051776.1 CDS Msip34_2007 NC_012969.1 2136243 2137175 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0682 ABC transporter related; ABC transporter-like protein complement(2136243..2137175) Methylovorus glucosetrophus SIP3-4 8173060 YP_003051777.1 CDS Msip34_2008 NC_012969.1 2137425 2139137 D SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0681 tetratricopeptide TPR_2; hypothetical protein 2137425..2139137 Methylovorus glucosetrophus SIP3-4 8173061 YP_003051778.1 CDS Msip34_2009 NC_012969.1 2139138 2139773 D TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; KEGG: mfa:Mfla_0680 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 2139138..2139773 Methylovorus glucosetrophus SIP3-4 8173062 YP_003051779.1 CDS Msip34_2010 NC_012969.1 2139778 2140638 D KEGG: mfa:Mfla_0679 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2139778..2140638 Methylovorus glucosetrophus SIP3-4 8173063 YP_003051780.1 CDS Msip34_2011 NC_012969.1 2140795 2141745 D KEGG: mfa:Mfla_0678 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2140795..2141745 Methylovorus glucosetrophus SIP3-4 8173065 YP_003051781.1 CDS Msip34_2012 NC_012969.1 2141829 2142446 D TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: mfa:Mfla_0677 50S ribosomal protein L25P; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 2141829..2142446 Methylovorus glucosetrophus SIP3-4 8173066 YP_003051782.1 CDS Msip34_2013 NC_012969.1 2142557 2143144 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2142557..2143144 Methylovorus glucosetrophus SIP3-4 8173067 YP_003051783.1 CDS Msip34_2014 NC_012969.1 2143163 2144248 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2143163..2144248 Methylovorus glucosetrophus SIP3-4 8173068 YP_003051784.1 CDS Msip34_2015 NC_012969.1 2144801 2145190 R hypothetical protein complement(2144801..2145190) Methylovorus glucosetrophus SIP3-4 8173070 YP_003051785.1 CDS Msip34_2016 NC_012969.1 2145465 2146394 R PFAM: Ankyrin; SMART: Ankyrin; KEGG: ankyrin repeat protein; ankyrin complement(2145465..2146394) Methylovorus glucosetrophus SIP3-4 8173071 YP_003051786.1 CDS Msip34_2017 NC_012969.1 2146401 2146673 R KEGG: sbp:Sbal223_4520 type I restriction-modification system methyltransferase subunit; type I restriction-modification system methyltransferase subunit complement(2146401..2146673) Methylovorus glucosetrophus SIP3-4 8173072 YP_003051787.1 CDS Msip34_2018 NC_012969.1 2146673 2146924 R KEGG: pfs:pQBR0338 hypothetical protein; hypothetical protein complement(2146673..2146924) Methylovorus glucosetrophus SIP3-4 8173073 YP_003051788.1 CDS Msip34_2019 NC_012969.1 2146924 2147190 R PFAM: Chorismate mutase; KEGG: mes:Meso_3340 chorismate mutase; Chorismate mutase complement(2146924..2147190) Methylovorus glucosetrophus SIP3-4 8173074 YP_003051789.1 CDS Msip34_2020 NC_012969.1 2147192 2147479 R hypothetical protein complement(2147192..2147479) Methylovorus glucosetrophus SIP3-4 8173075 YP_003051790.1 CDS Msip34_2021 NC_012969.1 2147674 2149374 R TIGRFAM: primosome, DnaD subunit; KEGG: hypothetical protein; primosome subunit DnaD complement(2147674..2149374) Methylovorus glucosetrophus SIP3-4 8173076 YP_003051791.1 CDS Msip34_2022 NC_012969.1 2149494 2150249 R KEGG: abu:Abu_1063 hypothetical protein; hypothetical protein complement(2149494..2150249) Methylovorus glucosetrophus SIP3-4 8173077 YP_003051792.1 CDS Msip34_2023 NC_012969.1 2150368 2151330 R PFAM: YadA domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_B0323 YadA-like haemagluttinin; YadA domain-containing protein complement(2150368..2151330) Methylovorus glucosetrophus SIP3-4 8173078 YP_003051793.1 CDS Msip34_2024 NC_012969.1 2151498 2151971 D hypothetical protein 2151498..2151971 Methylovorus glucosetrophus SIP3-4 8173079 YP_003051794.1 CDS Msip34_2025 NC_012969.1 2152098 2152721 D KEGG: mlo:mll7725 hypothetical protein; hypothetical protein 2152098..2152721 Methylovorus glucosetrophus SIP3-4 8173080 YP_003051795.1 CDS Msip34_2026 NC_012969.1 2152723 2154864 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: rbo:A1I_03770 P pilus assembly, fimbrial usher protein; fimbrial biogenesis outer membrane usher protein 2152723..2154864 Methylovorus glucosetrophus SIP3-4 8173081 YP_003051796.1 CDS Msip34_2027 NC_012969.1 2154920 2155405 R KEGG: conserved hypothetical protein; hypothetical protein complement(2154920..2155405) Methylovorus glucosetrophus SIP3-4 8173082 YP_003051797.1 CDS Msip34_2028 NC_012969.1 2155506 2157029 R PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_3094 ATPase central domain-containing protein; ATPase AAA complement(2155506..2157029) Methylovorus glucosetrophus SIP3-4 8173083 YP_003051798.1 CDS Msip34_2029 NC_012969.1 2157077 2158057 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: hch:HCH_02679 beta-glucosidase-like protein; glycoside hydrolase family 3 complement(2157077..2158057) Methylovorus glucosetrophus SIP3-4 8173084 YP_003051799.1 CDS Msip34_2030 NC_012969.1 2158059 2158805 R KEGG: bvi:Bcep1808_2147 hypothetical protein; hypothetical protein complement(2158059..2158805) Methylovorus glucosetrophus SIP3-4 8173085 YP_003051800.1 CDS Msip34_2031 NC_012969.1 2158802 2159296 R KEGG: dol:Dole_0903 type III restriction system methylase; hypothetical protein complement(2158802..2159296) Methylovorus glucosetrophus SIP3-4 8173086 YP_003051801.1 CDS Msip34_2032 NC_012969.1 2159427 2160629 D PFAM: domain of unknown function DUF1738; KEGG: sbn:Sbal195_4668 hypothetical protein; hypothetical protein 2159427..2160629 Methylovorus glucosetrophus SIP3-4 8173087 YP_003051802.1 CDS Msip34_2033 NC_012969.1 2160685 2162481 R KEGG: hypothetical protein; hypothetical protein complement(2160685..2162481) Methylovorus glucosetrophus SIP3-4 8173088 YP_003051803.1 CDS Msip34_2034 NC_012969.1 2162604 2163455 R hypothetical protein complement(2162604..2163455) Methylovorus glucosetrophus SIP3-4 8173089 YP_003051804.1 CDS Msip34_2035 NC_012969.1 2163954 2164634 R KEGG: bgl:bglu_1g24260 hypothetical protein; hypothetical protein complement(2163954..2164634) Methylovorus glucosetrophus SIP3-4 8173090 YP_003051805.1 CDS Msip34_2036 NC_012969.1 2164760 2165191 R KEGG: hypothetical protein; hypothetical protein complement(2164760..2165191) Methylovorus glucosetrophus SIP3-4 8173091 YP_003051806.1 CDS Msip34_2037 NC_012969.1 2165191 2165430 R hypothetical protein complement(2165191..2165430) Methylovorus glucosetrophus SIP3-4 8173092 YP_003051807.1 CDS Msip34_2038 NC_012969.1 2165430 2165828 R hypothetical protein complement(2165430..2165828) Methylovorus glucosetrophus SIP3-4 8173093 YP_003051808.1 CDS Msip34_2039 NC_012969.1 2165945 2168413 R SMART: AAA ATPase; KEGG: sml:Smlt3058 hypothetical protein; ATPase AAA complement(2165945..2168413) Methylovorus glucosetrophus SIP3-4 8173094 YP_003051809.1 CDS Msip34_2040 NC_012969.1 2168416 2169288 R KEGG: hypothetical protein; hypothetical protein complement(2168416..2169288) Methylovorus glucosetrophus SIP3-4 8173095 YP_003051810.1 CDS Msip34_2041 NC_012969.1 2169412 2170194 D KEGG: viral A-type inclusion protein; hypothetical protein 2169412..2170194 Methylovorus glucosetrophus SIP3-4 8173096 YP_003051811.1 CDS Msip34_2042 NC_012969.1 2170241 2172064 R KEGG: AGAP002737-PA; hypothetical protein complement(2170241..2172064) Methylovorus glucosetrophus SIP3-4 8173097 YP_003051812.1 CDS Msip34_2043 NC_012969.1 2172129 2174375 R KEGG: bvi:Bcep1808_2057 type IV secretory pathway VirD4 components-like protein; Type IV secretory pathway VirD4 protein-like protein complement(2172129..2174375) Methylovorus glucosetrophus SIP3-4 8173098 YP_003051813.1 CDS Msip34_2044 NC_012969.1 2174379 2174597 R hypothetical protein complement(2174379..2174597) Methylovorus glucosetrophus SIP3-4 8173099 YP_003051814.1 CDS Msip34_2045 NC_012969.1 2174649 2175074 R KEGG: DNA polymerase alpha; K02320 DNA polymerase alpha subunit A; hypothetical protein complement(2174649..2175074) Methylovorus glucosetrophus SIP3-4 8173100 YP_003051815.1 CDS Msip34_2046 NC_012969.1 2175071 2175274 R hypothetical protein complement(2175071..2175274) Methylovorus glucosetrophus SIP3-4 8173101 YP_003051816.1 CDS Msip34_2047 NC_012969.1 2175381 2176196 R KEGG: abu:Abu_1063 hypothetical protein; hypothetical protein complement(2175381..2176196) Methylovorus glucosetrophus SIP3-4 8173102 YP_003051817.1 CDS Msip34_2048 NC_012969.1 2176677 2180243 R KEGG: ott:OTT_1835 putative conjugative transfer protein TraA; ATP-dependent exoDNAse subunit alpha complement(2176677..2180243) Methylovorus glucosetrophus SIP3-4 8173103 YP_003051818.1 CDS Msip34_2049 NC_012969.1 2180243 2180563 R KEGG: viral A-type inclusion protein; viral A-type inclusion protein complement(2180243..2180563) Methylovorus glucosetrophus SIP3-4 8173104 YP_003051819.1 CDS Msip34_2050 NC_012969.1 2180950 2181648 D hypothetical protein 2180950..2181648 Methylovorus glucosetrophus SIP3-4 8173105 YP_003051820.1 CDS Msip34_2051 NC_012969.1 2181689 2182495 R hypothetical protein complement(2181689..2182495) Methylovorus glucosetrophus SIP3-4 8173106 YP_003051821.1 CDS Msip34_2052 NC_012969.1 2182680 2183129 R hypothetical protein complement(2182680..2183129) Methylovorus glucosetrophus SIP3-4 8173107 YP_003051822.1 CDS Msip34_2053 NC_012969.1 2183187 2183579 R hypothetical protein complement(2183187..2183579) Methylovorus glucosetrophus SIP3-4 8173108 YP_003051823.1 CDS Msip34_2054 NC_012969.1 2183623 2183775 R hypothetical protein complement(2183623..2183775) Methylovorus glucosetrophus SIP3-4 8173109 YP_003051824.1 CDS Msip34_2055 NC_012969.1 2184008 2184286 R hypothetical protein complement(2184008..2184286) Methylovorus glucosetrophus SIP3-4 8172626 YP_003051825.1 CDS Msip34_2056 NC_012969.1 2184338 2184508 R hypothetical protein complement(2184338..2184508) Methylovorus glucosetrophus SIP3-4 8172303 YP_003051826.1 CDS Msip34_2057 NC_012969.1 2184828 2185427 R KEGG: lpc:LPC_0165 hypothetical protein; hypothetical protein complement(2184828..2185427) Methylovorus glucosetrophus SIP3-4 8172304 YP_003051827.1 CDS Msip34_2058 NC_012969.1 2185430 2186026 R KEGG: lpn:lpg1269 hypothetical protein; hypothetical protein complement(2185430..2186026) Methylovorus glucosetrophus SIP3-4 8172305 YP_003051828.1 CDS Msip34_2059 NC_012969.1 2186101 2186454 D hypothetical protein 2186101..2186454 Methylovorus glucosetrophus SIP3-4 8172306 YP_003051829.1 CDS Msip34_2060 NC_012969.1 2186485 2186583 R hypothetical protein complement(2186485..2186583) Methylovorus glucosetrophus SIP3-4 8172307 YP_003051830.1 CDS Msip34_2061 NC_012969.1 2186916 2187143 R hypothetical protein complement(2186916..2187143) Methylovorus glucosetrophus SIP3-4 8172308 YP_003051831.1 CDS Msip34_2062 NC_012969.1 2187979 2188329 R hypothetical protein complement(2187979..2188329) Methylovorus glucosetrophus SIP3-4 8172309 YP_003051832.1 CDS Msip34_2063 NC_012969.1 2188668 2189555 R KEGG: hypothetical protein; hypothetical protein complement(2188668..2189555) Methylovorus glucosetrophus SIP3-4 8172310 YP_003051833.1 CDS Msip34_2064 NC_012969.1 2189566 2190090 R hypothetical protein complement(2189566..2190090) Methylovorus glucosetrophus SIP3-4 8172311 YP_003051834.1 CDS Msip34_2065 NC_012969.1 2190077 2190430 R hypothetical protein complement(2190077..2190430) Methylovorus glucosetrophus SIP3-4 8172312 YP_003051835.1 CDS Msip34_2066 NC_012969.1 2190483 2191202 R KEGG: maq:Maqu_3765 TonB family protein; hypothetical protein complement(2190483..2191202) Methylovorus glucosetrophus SIP3-4 8172313 YP_003051836.1 CDS Msip34_2067 NC_012969.1 2191275 2191862 R hypothetical protein complement(2191275..2191862) Methylovorus glucosetrophus SIP3-4 8172314 YP_003051837.1 CDS Msip34_2068 NC_012969.1 2192302 2193966 R KEGG: dvl:Dvul_1052 plasmid/phage primase; ATPase-like protein complement(2192302..2193966) Methylovorus glucosetrophus SIP3-4 8172315 YP_003051838.1 CDS Msip34_2069 NC_012969.1 2194084 2194254 R hypothetical protein complement(2194084..2194254) Methylovorus glucosetrophus SIP3-4 8172316 YP_003051839.1 CDS Msip34_2070 NC_012969.1 2194334 2194564 R hypothetical protein complement(2194334..2194564) Methylovorus glucosetrophus SIP3-4 8172317 YP_003051840.1 CDS Msip34_2071 NC_012969.1 2194557 2195327 R KEGG: bgl:bglu_1g24020 hypothetical protein; hypothetical protein complement(2194557..2195327) Methylovorus glucosetrophus SIP3-4 8172318 YP_003051841.1 CDS Msip34_2072 NC_012969.1 2195317 2196084 R KEGG: bgl:bglu_1g24020 hypothetical protein; hypothetical protein complement(2195317..2196084) Methylovorus glucosetrophus SIP3-4 8172319 YP_003051842.1 CDS Msip34_2073 NC_012969.1 2196084 2196464 R hypothetical protein complement(2196084..2196464) Methylovorus glucosetrophus SIP3-4 8172320 YP_003051843.1 CDS Msip34_2074 NC_012969.1 2196461 2196649 R hypothetical protein complement(2196461..2196649) Methylovorus glucosetrophus SIP3-4 8172321 YP_003051844.1 CDS Msip34_2075 NC_012969.1 2196666 2197166 R KEGG: sbn:Sbal195_3157 GCN5-related N-acetyltransferase; hypothetical protein complement(2196666..2197166) Methylovorus glucosetrophus SIP3-4 8172322 YP_003051845.1 CDS Msip34_2076 NC_012969.1 2197334 2198131 D KEGG: hypothetical protein; hypothetical protein 2197334..2198131 Methylovorus glucosetrophus SIP3-4 8172323 YP_003051846.1 CDS Msip34_2077 NC_012969.1 2198202 2198693 R KEGG: bcj:BCAS0661A hypothetical protein; hypothetical protein complement(2198202..2198693) Methylovorus glucosetrophus SIP3-4 8172324 YP_003051847.1 CDS Msip34_2078 NC_012969.1 2198744 2198974 R hypothetical protein complement(2198744..2198974) Methylovorus glucosetrophus SIP3-4 8172325 YP_003051848.1 CDS Msip34_2079 NC_012969.1 2199108 2199845 D KEGG: bgl:bglu_1g24010 hypothetical protein; hypothetical protein 2199108..2199845 Methylovorus glucosetrophus SIP3-4 8172326 YP_003051849.1 CDS Msip34_2080 NC_012969.1 2199914 2200981 R PFAM: Domain of unknown function DUF1814; KEGG: ajs:Ajs_1569 hypothetical protein; hypothetical protein complement(2199914..2200981) Methylovorus glucosetrophus SIP3-4 8172327 YP_003051850.1 CDS Msip34_2081 NC_012969.1 2200965 2201372 R KEGG: vei:Veis_3690 hypothetical protein; hypothetical protein complement(2200965..2201372) Methylovorus glucosetrophus SIP3-4 8172328 YP_003051851.1 CDS Msip34_2082 NC_012969.1 2201751 2203955 D KEGG: bvi:Bcep1808_2681 hypothetical protein; hypothetical protein 2201751..2203955 Methylovorus glucosetrophus SIP3-4 8172329 YP_003051852.1 CDS Msip34_2083 NC_012969.1 2204119 2204502 D hypothetical protein 2204119..2204502 Methylovorus glucosetrophus SIP3-4 8172330 YP_003051853.1 CDS Msip34_2084 NC_012969.1 2204906 2205682 R hypothetical protein complement(2204906..2205682) Methylovorus glucosetrophus SIP3-4 8172331 YP_003051854.1 CDS Msip34_2085 NC_012969.1 2205685 2206476 R hypothetical protein complement(2205685..2206476) Methylovorus glucosetrophus SIP3-4 8172332 YP_003051855.1 CDS Msip34_2086 NC_012969.1 2206540 2207160 R hypothetical protein complement(2206540..2207160) Methylovorus glucosetrophus SIP3-4 8172333 YP_003051856.1 CDS Msip34_2087 NC_012969.1 2207400 2208239 R KEGG: abu:Abu_1063 hypothetical protein; hypothetical protein complement(2207400..2208239) Methylovorus glucosetrophus SIP3-4 8172334 YP_003051857.1 CDS Msip34_2088 NC_012969.1 2208296 2209141 R KEGG: sit:TM1040_3583 hypothetical protein; hypothetical protein complement(2208296..2209141) Methylovorus glucosetrophus SIP3-4 8172335 YP_003051858.1 CDS Msip34_2089 NC_012969.1 2209138 2210616 R PFAM: integrase family protein; KEGG: lpf:lpl0065 hypothetical protein; integrase family protein complement(2209138..2210616) Methylovorus glucosetrophus SIP3-4 8172336 YP_003051859.1 CDS Msip34_2090 NC_012969.1 2211054 2212517 D KEGG: sea:SeAg_B2778 hypothetical protein; hypothetical protein 2211054..2212517 Methylovorus glucosetrophus SIP3-4 8172338 YP_003051860.1 CDS Msip34_2091 NC_012969.1 2212813 2213715 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpi:Rpic_4556 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2212813..2213715) Methylovorus glucosetrophus SIP3-4 8172339 YP_003051861.1 CDS Msip34_2092 NC_012969.1 2213813 2215366 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2213813..2215366 Methylovorus glucosetrophus SIP3-4 8172340 YP_003051862.1 CDS Msip34_2093 NC_012969.1 2215353 2217914 D KEGG: rpi:Rpic_4558 hypothetical protein; hypothetical protein 2215353..2217914 Methylovorus glucosetrophus SIP3-4 8172341 YP_003051863.1 CDS Msip34_2094 NC_012969.1 2217914 2218765 D KEGG: afe:Lferr_1367 hypothetical protein; hypothetical protein 2217914..2218765 Methylovorus glucosetrophus SIP3-4 8172342 YP_003051864.1 CDS Msip34_2095 NC_012969.1 2218879 2219148 D KEGG: cak:Caul_1030 hypothetical protein; hypothetical protein 2218879..2219148 Methylovorus glucosetrophus SIP3-4 8172343 YP_003051865.1 CDS Msip34_2096 NC_012969.1 2219160 2219555 D PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_0968 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2219160..2219555 Methylovorus glucosetrophus SIP3-4 8172344 YP_003051866.1 CDS Msip34_2097 NC_012969.1 2219555 2220109 D PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: mfa:Mfla_1147 nuclease (SNase-like); nuclease 2219555..2220109 Methylovorus glucosetrophus SIP3-4 8172345 YP_003051867.1 CDS Msip34_2098 NC_012969.1 2220333 2221994 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: abu:Abu_2318 sulfatase; sulfatase 2220333..2221994 Methylovorus glucosetrophus SIP3-4 8172346 YP_003051868.1 CDS Msip34_2099 NC_012969.1 2222135 2222902 R hypothetical protein complement(2222135..2222902) Methylovorus glucosetrophus SIP3-4 8172347 YP_003051869.1 CDS Msip34_2100 NC_012969.1 2222889 2223299 R KEGG: sbn:Sbal195_2908 peptidoglycan binding domain-containing protein; peptidoglycan-binding domain-containing protein complement(2222889..2223299) Methylovorus glucosetrophus SIP3-4 8172348 YP_003051870.1 CDS Msip34_2101 NC_012969.1 2223262 2224032 R hypothetical protein complement(2223262..2224032) Methylovorus glucosetrophus SIP3-4 8172349 YP_003051871.1 CDS Msip34_2102 NC_012969.1 2224019 2225350 R PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: xop:PXO_04252 LysM domain protein; peptidoglycan-binding LysM complement(2224019..2225350) Methylovorus glucosetrophus SIP3-4 8172350 YP_003051872.1 CDS Msip34_2103 NC_012969.1 2225353 2228295 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_B2108 two domain protein: VgrG and COG4253; ImpA family type VI secretion-associated protein complement(2225353..2228295) Methylovorus glucosetrophus SIP3-4 8172351 YP_003051873.1 CDS Msip34_2104 NC_012969.1 2228427 2228825 R PFAM: DoxX family protein; KEGG: rfr:Rfer_2574 DoxX; DoxX family protein complement(2228427..2228825) Methylovorus glucosetrophus SIP3-4 8172352 YP_003051874.1 CDS Msip34_2105 NC_012969.1 2228945 2229826 R PFAM: Pirin domain protein; KEGG: rfr:Rfer_0805 pirin-like; Pirin domain-containing protein complement(2228945..2229826) Methylovorus glucosetrophus SIP3-4 8172353 YP_003051875.1 CDS Msip34_2106 NC_012969.1 2229860 2230462 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: eba:ebA3879 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(2229860..2230462) Methylovorus glucosetrophus SIP3-4 8172354 YP_003051876.1 CDS Msip34_2107 NC_012969.1 2230573 2231490 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azo:azo3371 LysR family transcriptional regulator; LysR family transcriptional regulator 2230573..2231490 Methylovorus glucosetrophus SIP3-4 8172355 YP_003051877.1 CDS Msip34_2108 NC_012969.1 2231787 2232377 R TIGRFAM: LexA repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: mfa:Mfla_1781 putative prophage repressor; LexA repressor complement(2231787..2232377) Methylovorus glucosetrophus SIP3-4 8172356 YP_003051878.1 CDS Msip34_2109 NC_012969.1 2232427 2233551 R PFAM: protein of unknown function DUF482; KEGG: mfa:Mfla_0657 hypothetical protein; hypothetical protein complement(2232427..2233551) Methylovorus glucosetrophus SIP3-4 8172357 YP_003051879.1 CDS Msip34_2110 NC_012969.1 2233757 2233981 R KEGG: mfa:Mfla_0656 osmotically inducible lipoprotein; osmotically inducible lipoprotein complement(2233757..2233981) Methylovorus glucosetrophus SIP3-4 8172358 YP_003051880.1 CDS Msip34_2111 NC_012969.1 2234137 2234685 R KEGG: mfa:Mfla_0655 signal transduction protein; putative signal transduction protein complement(2234137..2234685) Methylovorus glucosetrophus SIP3-4 8172359 YP_003051881.1 CDS Msip34_2112 NC_012969.1 2235072 2235809 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_0654 two component transcriptional regulator; winged helix family two component transcriptional regulator 2235072..2235809 Methylovorus glucosetrophus SIP3-4 8172360 YP_003051882.1 CDS Msip34_2113 NC_012969.1 2235858 2237177 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0653 histidine kinase; histidine kinase 2235858..2237177 Methylovorus glucosetrophus SIP3-4 8172361 YP_003051883.1 CDS Msip34_2114 NC_012969.1 2237240 2238628 R TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0652 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase; uroporphyrin-III C-methyltransferase complement(2237240..2238628) Methylovorus glucosetrophus SIP3-4 8172362 YP_003051884.1 CDS Msip34_2115 NC_012969.1 2238906 2239979 D PFAM: Haemin-degrading family protein; KEGG: vei:Veis_3081 hemin-degrading family protein; Hemin-degrading family protein 2238906..2239979 Methylovorus glucosetrophus SIP3-4 8172363 YP_003051885.1 CDS Msip34_2116 NC_012969.1 2239976 2240878 D PFAM: periplasmic binding protein; KEGG: vei:Veis_3080 periplasmic binding protein; periplasmic-binding protein 2239976..2240878 Methylovorus glucosetrophus SIP3-4 8172364 YP_003051886.1 CDS Msip34_2117 NC_012969.1 2241152 2242198 D PFAM: transport system permease protein; KEGG: vei:Veis_3079 transport system permease protein; transport system permease 2241152..2242198 Methylovorus glucosetrophus SIP3-4 8172365 YP_003051887.1 CDS Msip34_2118 NC_012969.1 2242195 2243037 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3078 ABC transporter related; ABC transporter-like protein 2242195..2243037 Methylovorus glucosetrophus SIP3-4 8172366 YP_003051888.1 CDS Msip34_2119 NC_012969.1 2243203 2244534 D KEGG: mfa:Mfla_0651 tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 2243203..2244534 Methylovorus glucosetrophus SIP3-4 8172367 YP_003051889.1 CDS Msip34_2120 NC_012969.1 2244574 2245575 D PFAM: PhoH family protein; KEGG: mfa:Mfla_0650 PhoH-like protein; PhoH family protein 2244574..2245575 Methylovorus glucosetrophus SIP3-4 8172368 YP_003051890.1 CDS Msip34_2121 NC_012969.1 2245568 2246035 D PFAM: protein of unknown function UPF0054; KEGG: mfa:Mfla_0649 hypothetical protein; hypothetical protein 2245568..2246035 Methylovorus glucosetrophus SIP3-4 8172369 YP_003051891.1 CDS Msip34_2122 NC_012969.1 2246037 2246876 D PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: mfa:Mfla_0648 CBS; hypothetical protein 2246037..2246876 Methylovorus glucosetrophus SIP3-4 8172370 YP_003051892.1 CDS Msip34_2123 NC_012969.1 2246977 2247402 D hypothetical protein 2246977..2247402 Methylovorus glucosetrophus SIP3-4 8172371 YP_003051893.1 CDS Msip34_2124 NC_012969.1 2247540 2247959 R TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: rpi:Rpic_3207 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein complement(2247540..2247959) Methylovorus glucosetrophus SIP3-4 8172372 YP_003051894.1 CDS lnt NC_012969.1 2248144 2249625 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2248144..2249625 Methylovorus glucosetrophus SIP3-4 8172373 YP_003051895.1 CDS glyQ NC_012969.1 2249745 2250683 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2249745..2250683 Methylovorus glucosetrophus SIP3-4 8172374 YP_003051896.1 CDS Msip34_2127 NC_012969.1 2250680 2252785 D KEGG: mpt:Mpe_A3380 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 2250680..2252785 Methylovorus glucosetrophus SIP3-4 8172375 YP_003051897.1 CDS Msip34_2128 NC_012969.1 2252788 2253330 D Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 2252788..2253330 Methylovorus glucosetrophus SIP3-4 8172376 YP_003051898.1 CDS Msip34_2129 NC_012969.1 2253331 2254047 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mfa:Mfla_0642 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2253331..2254047 Methylovorus glucosetrophus SIP3-4 8172377 YP_003051899.1 CDS Msip34_2130 NC_012969.1 2254040 2254750 D PFAM: protein of unknown function DUF45; KEGG: mfa:Mfla_0641 hypothetical protein; hypothetical protein 2254040..2254750 Methylovorus glucosetrophus SIP3-4 8172378 YP_003051900.1 CDS Msip34_2131 NC_012969.1 2254793 2255257 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mfa:Mfla_0640 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2254793..2255257 Methylovorus glucosetrophus SIP3-4 8172379 YP_003051901.1 CDS Msip34_2132 NC_012969.1 2255339 2256526 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0639 globin; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2255339..2256526 Methylovorus glucosetrophus SIP3-4 8172380 YP_003051902.1 CDS Msip34_2133 NC_012969.1 2256621 2256842 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mfa:Mfla_0638 BFD-like (2Fe-2S)-binding region; (2fe-2S)-binding domain-containing protein complement(2256621..2256842) Methylovorus glucosetrophus SIP3-4 8172381 YP_003051903.1 CDS Msip34_2134 NC_012969.1 2257001 2257477 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: dar:Daro_1061 bacterioferritin; bacterioferritin complement(2257001..2257477) Methylovorus glucosetrophus SIP3-4 8172382 YP_003051904.1 CDS Msip34_2135 NC_012969.1 2257495 2257980 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: mfa:Mfla_0636 bacterioferritin; bacterioferritin complement(2257495..2257980) Methylovorus glucosetrophus SIP3-4 8174464 YP_003051905.1 CDS Msip34_2136 NC_012969.1 2258207 2260615 R TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0635 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(2258207..2260615) Methylovorus glucosetrophus SIP3-4 8174465 YP_003051906.1 CDS Msip34_2137 NC_012969.1 2260625 2261395 R PFAM: FixH family protein; KEGG: mfa:Mfla_0634 hypothetical protein; FixH family protein complement(2260625..2261395) Methylovorus glucosetrophus SIP3-4 8174466 YP_003051907.1 CDS Msip34_2138 NC_012969.1 2261434 2262858 R TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: mfa:Mfla_0633 4Fe-4S ferredoxin, iron-sulfur binding; cytochrome c oxidase accessory protein CcoG complement(2261434..2262858) Methylovorus glucosetrophus SIP3-4 8174467 YP_003051908.1 CDS Msip34_2139 NC_012969.1 2262972 2263910 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: mfa:Mfla_0632 cytochrome c oxidase, cbb3-type, subunit III; cbb3-type cytochrome c oxidase subunit III complement(2262972..2263910) Methylovorus glucosetrophus SIP3-4 8174468 YP_003051909.1 CDS Msip34_2140 NC_012969.1 2263929 2264090 R KEGG: mfa:Mfla_0631 hypothetical protein; hypothetical protein complement(2263929..2264090) Methylovorus glucosetrophus SIP3-4 8174469 YP_003051910.1 CDS Msip34_2141 NC_012969.1 2264112 2264846 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(2264112..2264846) Methylovorus glucosetrophus SIP3-4 8174470 YP_003051911.1 CDS Msip34_2142 NC_012969.1 2264874 2266337 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(2264874..2266337) Methylovorus glucosetrophus SIP3-4 8174471 YP_003051912.1 CDS Msip34_2143 NC_012969.1 2266572 2267261 R PFAM: OmpW family protein; KEGG: mfa:Mfla_0627 OmpW; OmpW family protein complement(2266572..2267261) Methylovorus glucosetrophus SIP3-4 8174472 YP_003051913.1 CDS Msip34_2144 NC_012969.1 2267511 2268431 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2267511..2268431 Methylovorus glucosetrophus SIP3-4 8174473 YP_003051914.1 CDS Msip34_2145 NC_012969.1 2268450 2268644 D KEGG: mfa:Mfla_0625 hypothetical protein; hypothetical protein 2268450..2268644 Methylovorus glucosetrophus SIP3-4 8174474 YP_003051915.1 CDS Msip34_2146 NC_012969.1 2268654 2269475 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(2268654..2269475) Methylovorus glucosetrophus SIP3-4 8174475 YP_003051916.1 CDS Msip34_2147 NC_012969.1 2269589 2270140 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: eba:ebA1022 hypothetical protein; ATP/cobalamin adenosyltransferase 2269589..2270140 Methylovorus glucosetrophus SIP3-4 8174476 YP_003051917.1 CDS Msip34_2148 NC_012969.1 2270312 2270512 D KEGG: mfa:Mfla_0621 hypothetical protein; hypothetical protein 2270312..2270512 Methylovorus glucosetrophus SIP3-4 8174477 YP_003051918.1 CDS Msip34_2149 NC_012969.1 2270573 2271994 D PFAM: phosphate-selective porin O and P; KEGG: mca:MCA0900 hypothetical protein; phosphate-selective porin O and P 2270573..2271994 Methylovorus glucosetrophus SIP3-4 8174478 YP_003051919.1 CDS Msip34_2150 NC_012969.1 2272025 2273035 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mfa:Mfla_0620 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein 2272025..2273035 Methylovorus glucosetrophus SIP3-4 8174479 YP_003051920.1 CDS Msip34_2151 NC_012969.1 2273104 2273445 D KEGG: mfa:Mfla_0619 hypothetical protein; hypothetical protein 2273104..2273445 Methylovorus glucosetrophus SIP3-4 8174480 YP_003051921.1 CDS Msip34_2152 NC_012969.1 2273501 2273716 D PFAM: TOBE domain protein; KEGG: mfa:Mfla_0618 molybdenum-pterin binding domain-containing protein; TOBE domain-containing protein 2273501..2273716 Methylovorus glucosetrophus SIP3-4 8174481 YP_003051922.1 CDS Msip34_2153 NC_012969.1 2273830 2275701 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_0617 SufS subfamily cysteine desulfurase; SufS subfamily cysteine desulfurase complement(2273830..2275701) Methylovorus glucosetrophus SIP3-4 8174482 YP_003051923.1 CDS Msip34_2154 NC_012969.1 2275688 2276605 R KEGG: mfa:Mfla_0616 major membrane protein I; major membrane protein I complement(2275688..2276605) Methylovorus glucosetrophus SIP3-4 8174483 YP_003051924.1 CDS Msip34_2155 NC_012969.1 2276656 2277660 R PFAM: transferase hexapeptide repeat containing protein; KEGG: mfa:Mfla_0615 serine O-acetyltransferase; Serine O-acetyltransferase complement(2276656..2277660) Methylovorus glucosetrophus SIP3-4 8174484 YP_003051925.1 CDS Msip34_2156 NC_012969.1 2277971 2278954 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mfa:Mfla_0614 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein 2277971..2278954 Methylovorus glucosetrophus SIP3-4 8174485 YP_003051926.1 CDS Msip34_2157 NC_012969.1 2278967 2279836 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_0612 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2278967..2279836 Methylovorus glucosetrophus SIP3-4 8174486 YP_003051927.1 CDS Msip34_2158 NC_012969.1 2280023 2280856 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0611 sulfate ABC transporter, permease protein CysT; sulfate ABC transporter permease 2280023..2280856 Methylovorus glucosetrophus SIP3-4 8174487 YP_003051928.1 CDS Msip34_2159 NC_012969.1 2280882 2281778 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0610 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter permease 2280882..2281778 Methylovorus glucosetrophus SIP3-4 8174488 YP_003051929.1 CDS Msip34_2160 NC_012969.1 2281790 2282857 D KEGG: mfa:Mfla_0609 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 2281790..2282857 Methylovorus glucosetrophus SIP3-4 8174489 YP_003051930.1 CDS Msip34_2161 NC_012969.1 2282994 2284280 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: aci:ACIAD3392 putative long-chain fatty acid transport protein; aromatic hydrocarbon degradation membrane protein 2282994..2284280 Methylovorus glucosetrophus SIP3-4 8174490 YP_003051931.1 CDS Msip34_2162 NC_012969.1 2284365 2284793 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mms:mma_0458 hypothetical protein; hypothetical protein 2284365..2284793 Methylovorus glucosetrophus SIP3-4 8174491 YP_003051932.1 CDS Msip34_2163 NC_012969.1 2284817 2285221 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: psa:PST_2526 YeeE/YedE family protein; hypothetical protein 2284817..2285221 Methylovorus glucosetrophus SIP3-4 8174492 YP_003051933.1 CDS Msip34_2164 NC_012969.1 2285340 2286707 D KEGG: mfa:Mfla_0600 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 2285340..2286707 Methylovorus glucosetrophus SIP3-4 8174493 YP_003051934.1 CDS Msip34_2165 NC_012969.1 2286704 2287192 D KEGG: mfa:Mfla_0599 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2286704..2287192 Methylovorus glucosetrophus SIP3-4 8174494 YP_003051935.1 CDS Msip34_2166 NC_012969.1 2287197 2287844 D PFAM: deoxynucleoside kinase; KEGG: mfa:Mfla_0598 deoxynucleoside kinase; deoxynucleoside kinase 2287197..2287844 Methylovorus glucosetrophus SIP3-4 8174495 YP_003051936.1 CDS Msip34_2167 NC_012969.1 2287847 2288659 D KEGG: azo:azo3144 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2287847..2288659 Methylovorus glucosetrophus SIP3-4 8174496 YP_003051937.1 CDS panC NC_012969.1 2288686 2289528 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2288686..2289528 Methylovorus glucosetrophus SIP3-4 8174497 YP_003051938.1 CDS Msip34_2169 NC_012969.1 2289528 2290556 D KEGG: dvm:DvMF_2303 esterase/lipase-like protein; esterase/lipase-like protein 2289528..2290556 Methylovorus glucosetrophus SIP3-4 8174498 YP_003051939.1 CDS Msip34_2170 NC_012969.1 2290721 2294146 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mfa:Mfla_1351 TonB-dependent receptor; TonB-dependent receptor complement(2290721..2294146) Methylovorus glucosetrophus SIP3-4 8174499 YP_003051940.1 CDS Msip34_2171 NC_012969.1 2294352 2295359 R PFAM: FecR protein; KEGG: mfa:Mfla_1352 putative FecR; anti-FecI sigma factor FecR complement(2294352..2295359) Methylovorus glucosetrophus SIP3-4 8174500 YP_003051941.1 CDS Msip34_2172 NC_012969.1 2295367 2295879 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: mfa:Mfla_1353 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit complement(2295367..2295879) Methylovorus glucosetrophus SIP3-4 8174501 YP_003051942.1 CDS Msip34_2173 NC_012969.1 2296244 2296636 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2296244..2296636 Methylovorus glucosetrophus SIP3-4 8174502 YP_003051943.1 CDS Msip34_2174 NC_012969.1 2296637 2296999 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mfa:Mfla_0593 iojap-related protein; iojap family protein 2296637..2296999 Methylovorus glucosetrophus SIP3-4 8174503 YP_003051944.1 CDS Msip34_2175 NC_012969.1 2297010 2297477 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2297010..2297477 Methylovorus glucosetrophus SIP3-4 8174504 YP_003051945.1 CDS Msip34_2176 NC_012969.1 2297493 2298938 D PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mfa:Mfla_0591 deoxyribodipyrimidine photo-lyase type I; deoxyribodipyrimidine photo-lyase 2297493..2298938 Methylovorus glucosetrophus SIP3-4 8174505 YP_003051946.1 CDS Msip34_2177 NC_012969.1 2298935 2300335 R TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_4246 galactose-proton symporter; sugar transporter complement(2298935..2300335) Methylovorus glucosetrophus SIP3-4 8174506 YP_003051947.1 CDS Msip34_2178 NC_012969.1 2300455 2300769 D KEGG: GE23677 gene product from transcript GE23677-RA; hypothetical protein 2300455..2300769 Methylovorus glucosetrophus SIP3-4 8174507 YP_003051948.1 CDS Msip34_2179 NC_012969.1 2300790 2301791 R PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: neu:NE0521 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase complement(2300790..2301791) Methylovorus glucosetrophus SIP3-4 8174508 YP_003051949.1 CDS Msip34_2180 NC_012969.1 2302024 2302764 D PFAM: VacJ family lipoprotein; KEGG: mfa:Mfla_0585 VacJ-like lipoprotein; VacJ family lipoprotein 2302024..2302764 Methylovorus glucosetrophus SIP3-4 8174509 YP_003051950.1 CDS Msip34_2181 NC_012969.1 2302861 2304228 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mfa:Mfla_0584 microcin-processing peptidase 1; peptidase U62 modulator of DNA gyrase complement(2302861..2304228) Methylovorus glucosetrophus SIP3-4 8174510 YP_003051951.1 CDS Msip34_2182 NC_012969.1 2304268 2304831 D PFAM: protein of unknown function DUF615; KEGG: mfa:Mfla_0583 hypothetical protein; hypothetical protein 2304268..2304831 Methylovorus glucosetrophus SIP3-4 8174511 YP_003051952.1 CDS Msip34_2183 NC_012969.1 2304908 2306893 R KEGG: mfa:Mfla_0576 putative site-specific recombinase, prophage insertion; putative site-specific recombinase, prophage insertion complement(2304908..2306893) Methylovorus glucosetrophus SIP3-4 8174512 YP_003051953.1 CDS Msip34_2184 NC_012969.1 2307011 2307787 R SMART: PDZ/DHR/GLGF domain protein; KEGG: mfa:Mfla_0575 hypothetical protein; PDZ/DHR/GLGF domain-containing protein complement(2307011..2307787) Methylovorus glucosetrophus SIP3-4 8174513 YP_003051954.1 CDS mogA NC_012969.1 2307886 2308476 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 2307886..2308476 Methylovorus glucosetrophus SIP3-4 8174514 YP_003051955.1 CDS Msip34_2186 NC_012969.1 2308488 2309444 D KEGG: mfa:Mfla_0573 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 2308488..2309444 Methylovorus glucosetrophus SIP3-4 8174515 YP_003051956.1 CDS Msip34_2187 NC_012969.1 2309550 2310623 D TIGRFAM: extracellular repeat protein, HAF family; PFAM: protein of unknown function DUF1555; KEGG: geo:Geob_2006 extracellular repeat protein, HAF family; extracellular repeat-containing protein, HAF family 2309550..2310623 Methylovorus glucosetrophus SIP3-4 8174516 YP_003051957.1 CDS Msip34_2188 NC_012969.1 2310728 2311222 D PFAM: phosphatidylglycerophosphatase A; KEGG: mfa:Mfla_0572 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 2310728..2311222 Methylovorus glucosetrophus SIP3-4 8174517 YP_003051958.1 CDS Msip34_2189 NC_012969.1 2311195 2311695 D PFAM: CinA domain protein; KEGG: nmu:Nmul_A0015 CinA-like; CinA domain-containing protein 2311195..2311695 Methylovorus glucosetrophus SIP3-4 8174518 YP_003051959.1 CDS Msip34_2190 NC_012969.1 2311778 2312077 R KEGG: mpt:Mpe_A1315 putative transmembrane protein; hypothetical protein complement(2311778..2312077) Methylovorus glucosetrophus SIP3-4 8174519 YP_003051960.1 CDS recA NC_012969.1 2312360 2313394 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2312360..2313394 Methylovorus glucosetrophus SIP3-4 8174520 YP_003051961.1 CDS Msip34_2192 NC_012969.1 2313375 2313971 D PFAM: regulatory protein RecX; KEGG: mfa:Mfla_0569 regulatory protein RecX; regulatory protein RecX 2313375..2313971 Methylovorus glucosetrophus SIP3-4 8174521 YP_003051962.1 CDS alaS NC_012969.1 2314002 2316626 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2314002..2316626 Methylovorus glucosetrophus SIP3-4 8174522 YP_003051963.1 CDS Msip34_2194 NC_012969.1 2316705 2317928 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2316705..2317928 Methylovorus glucosetrophus SIP3-4 8174523 YP_003051964.1 CDS Msip34_2195 NC_012969.1 2318379 2318615 R hypothetical protein complement(2318379..2318615) Methylovorus glucosetrophus SIP3-4 8174526 YP_003051965.1 CDS Msip34_2196 NC_012969.1 2318691 2318870 R hypothetical protein complement(2318691..2318870) Methylovorus glucosetrophus SIP3-4 8174527 YP_003051966.1 CDS Msip34_2197 NC_012969.1 2318867 2319070 R hypothetical protein complement(2318867..2319070) Methylovorus glucosetrophus SIP3-4 8174528 YP_003051967.1 CDS Msip34_2198 NC_012969.1 2319291 2319866 D PFAM: protein of unknown function DUF1555; KEGG: lch:Lcho_1067 hypothetical protein; hypothetical protein 2319291..2319866 Methylovorus glucosetrophus SIP3-4 8174529 YP_003051968.1 CDS Msip34_2199 NC_012969.1 2320150 2322549 D PFAM: Catalase domain protein; ThiJ/PfpI domain protein; KEGG: pna:Pnap_1830 catalase; catalase 2320150..2322549 Methylovorus glucosetrophus SIP3-4 8174530 YP_003051969.1 CDS Msip34_2200 NC_012969.1 2322736 2324364 D KEGG: rme:Rmet_6151 ATPase involved in DNA repair; hypothetical protein 2322736..2324364 Methylovorus glucosetrophus SIP3-4 8174531 YP_003051970.1 CDS Msip34_2201 NC_012969.1 2324361 2325137 D KEGG: nha:Nham_0324 hypothetical protein; hypothetical protein 2324361..2325137 Methylovorus glucosetrophus SIP3-4 8174532 YP_003051971.1 CDS Msip34_2202 NC_012969.1 2325442 2327994 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: xcv:XCV3021 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2325442..2327994 Methylovorus glucosetrophus SIP3-4 8174533 YP_003051972.1 CDS Msip34_2203 NC_012969.1 2328060 2329274 R PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: tbd:Tbd_1181 malate dehydrogenase (oxaloacetate-decarboxylating); malate dehydrogenase complement(2328060..2329274) Methylovorus glucosetrophus SIP3-4 8174534 YP_003051973.1 CDS Msip34_2204 NC_012969.1 2329334 2329669 R KEGG: tgr:Tgr7_3247 hypothetical protein; hypothetical protein complement(2329334..2329669) Methylovorus glucosetrophus SIP3-4 8174535 YP_003051974.1 CDS Msip34_2205 NC_012969.1 2329682 2332747 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mca:MCA2720 CzcA family heavy metal efflux protein; CzcA family heavy metal efflux pump complement(2329682..2332747) Methylovorus glucosetrophus SIP3-4 8174536 YP_003051975.1 CDS Msip34_2206 NC_012969.1 2332747 2333865 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tgr:Tgr7_3245 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(2332747..2333865) Methylovorus glucosetrophus SIP3-4 8174537 YP_003051976.1 CDS Msip34_2207 NC_012969.1 2333862 2335151 R KEGG: tbd:Tbd_1748 putative outer membrane protein; putative outer membrane protein complement(2333862..2335151) Methylovorus glucosetrophus SIP3-4 8174538 YP_003051977.1 CDS Msip34_2208 NC_012969.1 2335208 2335606 R hypothetical protein complement(2335208..2335606) Methylovorus glucosetrophus SIP3-4 8174539 YP_003051978.1 CDS Msip34_2209 NC_012969.1 2335933 2337312 D PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: har:HEAR0927 putative two-component histidine kinase sensor protein; histidine kinase 2335933..2337312 Methylovorus glucosetrophus SIP3-4 8174540 YP_003051979.1 CDS Msip34_2210 NC_012969.1 2337305 2337751 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: har:HEAR0928 putative response regulator receiver (Che-Y like); response regulator receiver protein 2337305..2337751 Methylovorus glucosetrophus SIP3-4 8174541 YP_003051980.1 CDS Msip34_2211 NC_012969.1 2337805 2340270 D KEGG: har:HEAR0929 putative sensor/regulator protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2337805..2340270 Methylovorus glucosetrophus SIP3-4 8174542 YP_003051981.1 CDS Msip34_2212 NC_012969.1 2340307 2341554 R PFAM: glucose sorbosone dehydrogenase; KEGG: mfa:Mfla_0530 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase complement(2340307..2341554) Methylovorus glucosetrophus SIP3-4 8174543 YP_003051982.1 CDS Msip34_2213 NC_012969.1 2341714 2342889 D PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mfa:Mfla_0019 CBS domain-containing protein; hypothetical protein 2341714..2342889 Methylovorus glucosetrophus SIP3-4 8173544 YP_003051983.1 CDS Msip34_2214 NC_012969.1 2342908 2343792 D PFAM: protein of unknown function DUF455; KEGG: mfa:Mfla_1042 hypothetical protein; hypothetical protein 2342908..2343792 Methylovorus glucosetrophus SIP3-4 8173545 YP_003051984.1 CDS Msip34_2215 NC_012969.1 2343876 2344496 R PFAM: regulatory protein TetR; KEGG: rso:RSc0820 putative transcription regulator protein; TetR family transcriptional regulator complement(2343876..2344496) Methylovorus glucosetrophus SIP3-4 8173546 YP_003051985.1 CDS Msip34_2216 NC_012969.1 2344578 2345306 D PFAM: nitroreductase; KEGG: rso:RSc0821 putative NADPH nitroreductase protein; nitroreductase 2344578..2345306 Methylovorus glucosetrophus SIP3-4 8173547 YP_003051986.1 CDS Msip34_2217 NC_012969.1 2345408 2346229 R PFAM: protein of unknown function DUF299; KEGG: mfa:Mfla_2204 hypothetical protein; hypothetical protein complement(2345408..2346229) Methylovorus glucosetrophus SIP3-4 8173548 YP_003051987.1 CDS Msip34_2218 NC_012969.1 2346364 2348733 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2346364..2348733) Methylovorus glucosetrophus SIP3-4 8173549 YP_003051988.1 CDS Msip34_2219 NC_012969.1 2349301 2349537 D hypothetical protein 2349301..2349537 Methylovorus glucosetrophus SIP3-4 8173550 YP_003051989.1 CDS Msip34_2220 NC_012969.1 2349541 2350575 R PFAM: protein of unknown function DUF481; KEGG: mfa:Mfla_0527 hypothetical protein; hypothetical protein complement(2349541..2350575) Methylovorus glucosetrophus SIP3-4 8173551 YP_003051990.1 CDS Msip34_2221 NC_012969.1 2350794 2351573 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0990 HAD family hydrolase; HAD-superfamily hydrolase complement(2350794..2351573) Methylovorus glucosetrophus SIP3-4 8173552 YP_003051991.1 CDS Msip34_2222 NC_012969.1 2351631 2352263 R PFAM: phosphoesterase PA-phosphatase related; KEGG: gbm:Gbem_3030 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(2351631..2352263) Methylovorus glucosetrophus SIP3-4 8173553 YP_003051992.1 CDS Msip34_2223 NC_012969.1 2352473 2352781 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_0010 transport-associated; transporter complement(2352473..2352781) Methylovorus glucosetrophus SIP3-4 8173554 YP_003051993.1 CDS Msip34_2224 NC_012969.1 2352908 2353444 R PFAM: YaeQ family protein; KEGG: mfa:Mfla_0160 YaeQ; YaeQ family protein complement(2352908..2353444) Methylovorus glucosetrophus SIP3-4 8173555 YP_003051994.1 CDS Msip34_2225 NC_012969.1 2353865 2355217 R KEGG: mfa:Mfla_0522 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(2353865..2355217) Methylovorus glucosetrophus SIP3-4 8173557 YP_003051995.1 CDS Msip34_2226 NC_012969.1 2355321 2356127 D PFAM: cytochrome c assembly protein; KEGG: mfa:Mfla_0521 cytochrome c assembly protein; cytochrome c assembly protein 2355321..2356127 Methylovorus glucosetrophus SIP3-4 8173558 YP_003051996.1 CDS Msip34_2227 NC_012969.1 2356181 2356843 R TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0520 HAD family hydrolase; HAD-superfamily hydrolase complement(2356181..2356843) Methylovorus glucosetrophus SIP3-4 8173559 YP_003051997.1 CDS Msip34_2228 NC_012969.1 2356961 2357626 D KEGG: mfa:Mfla_0519 putative integral membrane protein; putative integral membrane protein 2356961..2357626 Methylovorus glucosetrophus SIP3-4 8173560 YP_003051998.1 CDS Msip34_2229 NC_012969.1 2357698 2359251 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2357698..2359251) Methylovorus glucosetrophus SIP3-4 8173561 YP_003051999.1 CDS Msip34_2230 NC_012969.1 2359326 2360126 R KEGG: mfa:Mfla_0515 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(2359326..2360126) Methylovorus glucosetrophus SIP3-4 8173562 YP_003052000.1 CDS tgt NC_012969.1 2360223 2361353 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2360223..2361353 Methylovorus glucosetrophus SIP3-4 8173563 YP_003052001.1 CDS Msip34_2232 NC_012969.1 2361496 2361813 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mfa:Mfla_0513 protein translocase subunit YajC; preprotein translocase subunit YajC 2361496..2361813 Methylovorus glucosetrophus SIP3-4 8173564 YP_003052002.1 CDS Msip34_2233 NC_012969.1 2361924 2363753 D TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mfa:Mfla_0512 protein-export membrane protein SecD; protein-export membrane protein SecD 2361924..2363753 Methylovorus glucosetrophus SIP3-4 8173565 YP_003052003.1 CDS secF NC_012969.1 2363792 2364730 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2363792..2364730 Methylovorus glucosetrophus SIP3-4 8173566 YP_003052004.1 CDS Msip34_2235 NC_012969.1 2364849 2366087 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: nmu:Nmul_A2132 hypothetical protein; hypothetical protein 2364849..2366087 Methylovorus glucosetrophus SIP3-4 8173567 YP_003052005.1 CDS Msip34_2236 NC_012969.1 2366229 2366540 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mfa:Mfla_0509 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2366229..2366540 Methylovorus glucosetrophus SIP3-4 8173568 YP_003052006.1 CDS Msip34_2237 NC_012969.1 2366552 2368837 D KEGG: mfa:Mfla_0508 ATPase AAA-2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 2366552..2368837 Methylovorus glucosetrophus SIP3-4 8173569 YP_003052007.1 CDS Msip34_2238 NC_012969.1 2369556 2370170 R PFAM: Glutathione S-transferase domain; glutaredoxin; KEGG: mfa:Mfla_0507 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(2369556..2370170) Methylovorus glucosetrophus SIP3-4 8173570 YP_003052008.1 CDS Msip34_2239 NC_012969.1 2370170 2370373 R KEGG: tmz:Tmz1t_1015 hypothetical protein; hypothetical protein complement(2370170..2370373) Methylovorus glucosetrophus SIP3-4 8173571 YP_003052009.1 CDS Msip34_2240 NC_012969.1 2370389 2371408 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2370389..2371408) Methylovorus glucosetrophus SIP3-4 8173572 YP_003052010.1 CDS Msip34_2241 NC_012969.1 2371405 2371542 R hypothetical protein complement(2371405..2371542) Methylovorus glucosetrophus SIP3-4 8173573 YP_003052011.1 CDS Msip34_2242 NC_012969.1 2371568 2371903 R PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_0505 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(2371568..2371903) Methylovorus glucosetrophus SIP3-4 8173574 YP_003052012.1 CDS Msip34_2243 NC_012969.1 2371939 2375040 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0504 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(2371939..2375040) Methylovorus glucosetrophus SIP3-4 8173575 YP_003052013.1 CDS Msip34_2244 NC_012969.1 2375223 2375555 R PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_0505 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(2375223..2375555) Methylovorus glucosetrophus SIP3-4 8173576 YP_003052014.1 CDS Msip34_2245 NC_012969.1 2375566 2378661 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0504 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(2375566..2378661) Methylovorus glucosetrophus SIP3-4 8173577 YP_003052015.1 CDS Msip34_2246 NC_012969.1 2378665 2379834 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0503 secretion protein HlyD; RND family efflux transporter MFP subunit complement(2378665..2379834) Methylovorus glucosetrophus SIP3-4 8173578 YP_003052016.1 CDS Msip34_2247 NC_012969.1 2379834 2381087 R PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0502 outer membrane efflux protein; cyclic nucleotide-binding protein complement(2379834..2381087) Methylovorus glucosetrophus SIP3-4 8173579 YP_003052017.1 CDS Msip34_2248 NC_012969.1 2381310 2381597 R KEGG: mfa:Mfla_0501 hypothetical protein; hypothetical protein complement(2381310..2381597) Methylovorus glucosetrophus SIP3-4 8173580 YP_003052018.1 CDS Msip34_2249 NC_012969.1 2381640 2383010 R KEGG: mfa:Mfla_0500 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); cysteinyl-tRNA synthetase complement(2381640..2383010) Methylovorus glucosetrophus SIP3-4 8173581 YP_003052019.1 CDS Msip34_2250 NC_012969.1 2383153 2384355 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0499 tetratricopeptide TPR_2; hypothetical protein 2383153..2384355 Methylovorus glucosetrophus SIP3-4 8173582 YP_003052020.1 CDS Msip34_2251 NC_012969.1 2384376 2385590 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mfa:Mfla_0498 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 2384376..2385590 Methylovorus glucosetrophus SIP3-4 8173583 YP_003052021.1 CDS Msip34_2252 NC_012969.1 2385613 2386281 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mfa:Mfla_0497 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2385613..2386281 Methylovorus glucosetrophus SIP3-4 8173584 YP_003052022.1 CDS Msip34_2253 NC_012969.1 2386274 2386765 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mfa:Mfla_0496 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2386274..2386765 Methylovorus glucosetrophus SIP3-4 8173585 YP_003052023.1 CDS Msip34_2254 NC_012969.1 2386784 2387539 D catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2386784..2387539 Methylovorus glucosetrophus SIP3-4 8173586 YP_003052024.1 CDS Msip34_2255 NC_012969.1 2387564 2388262 R PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: eba:ebA4165 hypothetical protein; FHA domain-containing protein complement(2387564..2388262) Methylovorus glucosetrophus SIP3-4 8173587 YP_003052025.1 CDS Msip34_2256 NC_012969.1 2388429 2388905 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mfa:Mfla_0493 NusB antitermination factor; NusB antitermination factor complement(2388429..2388905) Methylovorus glucosetrophus SIP3-4 8173588 YP_003052026.1 CDS Msip34_2257 NC_012969.1 2388902 2389351 R KEGG: mfa:Mfla_0492 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(2388902..2389351) Methylovorus glucosetrophus SIP3-4 8173589 YP_003052027.1 CDS Msip34_2258 NC_012969.1 2389565 2391232 R PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_0490 major facilitator transporter; major facilitator superfamily protein complement(2389565..2391232) Methylovorus glucosetrophus SIP3-4 8173590 YP_003052028.1 CDS Msip34_2259 NC_012969.1 2391417 2392103 D KEGG: mfa:Mfla_0489 two component transcriptional regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component transcriptional regulator PhoB 2391417..2392103 Methylovorus glucosetrophus SIP3-4 8173591 YP_003052029.1 CDS Msip34_2260 NC_012969.1 2392174 2393526 D KEGG: mfa:Mfla_0488 multi-sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2392174..2393526 Methylovorus glucosetrophus SIP3-4 8173592 YP_003052030.1 CDS Msip34_2261 NC_012969.1 2393560 2393940 R KEGG: hypothetical protein; hypothetical protein complement(2393560..2393940) Methylovorus glucosetrophus SIP3-4 8173593 YP_003052031.1 CDS Msip34_2262 NC_012969.1 2394082 2397894 R PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mfa:Mfla_0476 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein complement(2394082..2397894) Methylovorus glucosetrophus SIP3-4 8173594 YP_003052032.1 CDS Msip34_2263 NC_012969.1 2398094 2398609 D PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mfa:Mfla_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin domain-containing protein 2398094..2398609 Methylovorus glucosetrophus SIP3-4 8173595 YP_003052033.1 CDS Msip34_2264 NC_012969.1 2398612 2399025 D PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0474 hypothetical protein; hypothetical protein 2398612..2399025 Methylovorus glucosetrophus SIP3-4 8173596 YP_003052034.1 CDS Msip34_2265 NC_012969.1 2399028 2399786 D KEGG: mfa:Mfla_0473 hypothetical protein; hypothetical protein 2399028..2399786 Methylovorus glucosetrophus SIP3-4 8173597 YP_003052035.1 CDS Msip34_2266 NC_012969.1 2399839 2400363 R KEGG: xau:Xaut_0030 hypothetical protein; hypothetical protein complement(2399839..2400363) Methylovorus glucosetrophus SIP3-4 8173598 YP_003052036.1 CDS Msip34_2267 NC_012969.1 2400558 2401121 D PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0472 TetR family transcriptional regulator; TetR family transcriptional regulator 2400558..2401121 Methylovorus glucosetrophus SIP3-4 8173599 YP_003052037.1 CDS Msip34_2268 NC_012969.1 2401196 2402137 D PFAM: PfkB domain protein; KEGG: mfa:Mfla_0471 PfkB; PfkB domain-containing protein 2401196..2402137 Methylovorus glucosetrophus SIP3-4 8173600 YP_003052038.1 CDS Msip34_2269 NC_012969.1 2402150 2402602 D PFAM: 17 kDa surface antigen; KEGG: mfa:Mfla_0470 17 kDa surface antigen; 17 kDa surface antigen 2402150..2402602 Methylovorus glucosetrophus SIP3-4 8173601 YP_003052039.1 CDS Msip34_2270 NC_012969.1 2402776 2403525 D KEGG: mfa:Mfla_0469 ornithine-acyl[acyl carrier protein] N-acyltransferase; ornithine-acyl(acyl carrier protein) N-acyltransferase 2402776..2403525 Methylovorus glucosetrophus SIP3-4 8173602 YP_003052040.1 CDS Msip34_2271 NC_012969.1 2403526 2404284 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mfa:Mfla_0468 lyso-ornithine lipid acyltransferase; phospholipid/glycerol acyltransferase 2403526..2404284 Methylovorus glucosetrophus SIP3-4 8173603 YP_003052041.1 CDS apaH NC_012969.1 2404237 2405091 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(2404237..2405091) Methylovorus glucosetrophus SIP3-4 8173604 YP_003052042.1 CDS Msip34_2273 NC_012969.1 2405141 2406109 R PFAM: cytochrome c class I; KEGG: tbd:Tbd_0146 cytochrome c5; class I cytochrome c complement(2405141..2406109) Methylovorus glucosetrophus SIP3-4 8173605 YP_003052043.1 CDS Msip34_2274 NC_012969.1 2406332 2408029 R PFAM: sulfatase; KEGG: esa:ESA_04100 hypothetical protein; sulfatase complement(2406332..2408029) Methylovorus glucosetrophus SIP3-4 8173607 YP_003052044.1 CDS Msip34_2275 NC_012969.1 2408259 2408897 D PFAM: 2OG-Fe(II) oxygenase; KEGG: ppw:PputW619_2476 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2408259..2408897 Methylovorus glucosetrophus SIP3-4 8173608 YP_003052045.1 CDS Msip34_2276 NC_012969.1 2409197 2410252 D TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: mfa:Mfla_0423 S-adenosylmethionine; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 2409197..2410252 Methylovorus glucosetrophus SIP3-4 8173610 YP_003052046.1 CDS Msip34_2277 NC_012969.1 2410275 2411312 D hypothetical protein 2410275..2411312 Methylovorus glucosetrophus SIP3-4 8173611 YP_003052047.1 CDS Msip34_2278 NC_012969.1 2411328 2411930 R PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_0421 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit complement(2411328..2411930) Methylovorus glucosetrophus SIP3-4 8173612 YP_003052048.1 CDS Msip34_2279 NC_012969.1 2412009 2413733 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(2412009..2413733) Methylovorus glucosetrophus SIP3-4 8173613 YP_003052049.1 CDS Msip34_2280 NC_012969.1 2413904 2414551 R KEGG: azo:azo2773 hypothetical protein; hypothetical protein complement(2413904..2414551) Methylovorus glucosetrophus SIP3-4 8173614 YP_003052050.1 CDS Msip34_2281 NC_012969.1 2414532 2415041 R PFAM: protein of unknown function DUF477; KEGG: mfa:Mfla_0417 hypothetical protein; hypothetical protein complement(2414532..2415041) Methylovorus glucosetrophus SIP3-4 8173615 YP_003052051.1 CDS Msip34_2282 NC_012969.1 2415045 2415905 R PFAM: protein of unknown function DUF477; KEGG: mfa:Mfla_0416 hypothetical protein; hypothetical protein complement(2415045..2415905) Methylovorus glucosetrophus SIP3-4 8173616 YP_003052052.1 CDS Msip34_2283 NC_012969.1 2415911 2416504 R PFAM: LemA family protein; KEGG: mfa:Mfla_0415 hypothetical protein; LemA family protein complement(2415911..2416504) Methylovorus glucosetrophus SIP3-4 8173617 YP_003052053.1 CDS Msip34_2284 NC_012969.1 2416533 2417666 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mfa:Mfla_0414 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein complement(2416533..2417666) Methylovorus glucosetrophus SIP3-4 8173618 YP_003052054.1 CDS Msip34_2285 NC_012969.1 2417663 2418124 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_0413 SSU ribosomal protein S18P alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(2417663..2418124) Methylovorus glucosetrophus SIP3-4 8173619 YP_003052055.1 CDS Msip34_2286 NC_012969.1 2418121 2418813 R PFAM: peptidase M22 glycoprotease; KEGG: mfa:Mfla_0412 peptidase M22, glycoprotease; peptidase M22 glycoprotease complement(2418121..2418813) Methylovorus glucosetrophus SIP3-4 8173620 YP_003052056.1 CDS Msip34_2287 NC_012969.1 2418829 2419233 R PFAM: Class I peptide chain release factor; KEGG: rme:Rmet_3468 class I peptide chain release factor; class I peptide chain release factor complement(2418829..2419233) Methylovorus glucosetrophus SIP3-4 8173621 YP_003052057.1 CDS Msip34_2288 NC_012969.1 2419357 2419722 D KEGG: vsa:VSAL_I1593 hypothetical protein; hypothetical protein 2419357..2419722 Methylovorus glucosetrophus SIP3-4 8173622 YP_003052058.1 CDS Msip34_2289 NC_012969.1 2419719 2419940 D KEGG: rpi:Rpic_3527 hypothetical protein; hypothetical protein 2419719..2419940 Methylovorus glucosetrophus SIP3-4 8173623 YP_003052059.1 CDS Msip34_2290 NC_012969.1 2419980 2420597 D KEGG: mfa:Mfla_0111 hypothetical protein; hypothetical protein 2419980..2420597 Methylovorus glucosetrophus SIP3-4 8173624 YP_003052060.1 CDS Msip34_2291 NC_012969.1 2420599 2420922 D hypothetical protein 2420599..2420922 Methylovorus glucosetrophus SIP3-4 8174303 YP_003052061.1 CDS Msip34_2292 NC_012969.1 2420953 2421840 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: abc:ACICU_01545 DMT family permease; hypothetical protein 2420953..2421840 Methylovorus glucosetrophus SIP3-4 8174304 YP_003052062.1 CDS groEL NC_012969.1 2421941 2423563 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(2421941..2423563) Methylovorus glucosetrophus SIP3-4 8174305 YP_003052063.1 CDS Msip34_2294 NC_012969.1 2423612 2423929 R PFAM: chaperonin Cpn10; KEGG: bmj:BMULJ_03266 chaperonin GroES; chaperonin Cpn10 complement(2423612..2423929) Methylovorus glucosetrophus SIP3-4 8174306 YP_003052064.1 CDS Msip34_2295 NC_012969.1 2424112 2424741 R KEGG: cvi:CV_3231 hypothetical protein; hypothetical protein complement(2424112..2424741) Methylovorus glucosetrophus SIP3-4 8174307 YP_003052065.1 CDS Msip34_2296 NC_012969.1 2424888 2425253 R PFAM: protein of unknown function DUF202; KEGG: mfa:Mfla_1871 hypothetical protein; hypothetical protein complement(2424888..2425253) Methylovorus glucosetrophus SIP3-4 8174308 YP_003052066.1 CDS Msip34_2297 NC_012969.1 2425269 2426183 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: msl:Msil_2598 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(2425269..2426183) Methylovorus glucosetrophus SIP3-4 8174309 YP_003052067.1 CDS Msip34_2298 NC_012969.1 2426256 2426522 R KEGG: pen:PSEEN1394 hypothetical protein; hypothetical protein complement(2426256..2426522) Methylovorus glucosetrophus SIP3-4 8174310 YP_003052068.1 CDS Msip34_2299 NC_012969.1 2426658 2427590 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_0600 LysR family transcriptional regulator; LysR family transcriptional regulator 2426658..2427590 Methylovorus glucosetrophus SIP3-4 8174311 YP_003052069.1 CDS Msip34_2300 NC_012969.1 2427599 2429557 R SMART: helicase c2; KEGG: mfa:Mfla_0411 helicase C2; helicase c2 complement(2427599..2429557) Methylovorus glucosetrophus SIP3-4 8174312 YP_003052070.1 CDS Msip34_2301 NC_012969.1 2429673 2430083 D KEGG: bpy:Bphyt_4955 hypothetical protein; hypothetical protein 2429673..2430083 Methylovorus glucosetrophus SIP3-4 8174313 YP_003052071.1 CDS Msip34_2302 NC_012969.1 2430115 2430843 D KEGG: azo:azo0068 hypothetical protein; hypothetical protein 2430115..2430843 Methylovorus glucosetrophus SIP3-4 8174314 YP_003052072.1 CDS Msip34_2303 NC_012969.1 2430851 2431579 R PFAM: 20S proteasome A and B subunits; KEGG: mfa:Mfla_0401 20S proteasome, A and B subunits; 20S proteasome subunits A/B complement(2430851..2431579) Methylovorus glucosetrophus SIP3-4 8174315 YP_003052073.1 CDS Msip34_2304 NC_012969.1 2431717 2432772 D PFAM: aldo/keto reductase; KEGG: mfa:Mfla_0400 aldo/keto reductase; aldo/keto reductase 2431717..2432772 Methylovorus glucosetrophus SIP3-4 8174316 YP_003052074.1 CDS Msip34_2305 NC_012969.1 2432792 2433676 R KEGG: sdn:Sden_0374 hypothetical protein; hypothetical protein complement(2432792..2433676) Methylovorus glucosetrophus SIP3-4 8174317 YP_003052075.1 CDS Msip34_2306 NC_012969.1 2433818 2434255 D PFAM: globin; KEGG: mpt:Mpe_A1232 globin protein; globin 2433818..2434255 Methylovorus glucosetrophus SIP3-4 8174318 YP_003052076.1 CDS Msip34_2307 NC_012969.1 2434274 2434903 D KEGG: mpt:Mpe_A0215 hypothetical protein; hypothetical protein 2434274..2434903 Methylovorus glucosetrophus SIP3-4 8174319 YP_003052077.1 CDS Msip34_2308 NC_012969.1 2434919 2437267 D KEGG: mpt:Mpe_A0214 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase/phosphodiesterase 2434919..2437267 Methylovorus glucosetrophus SIP3-4 8174320 YP_003052078.1 CDS Msip34_2309 NC_012969.1 2437305 2438339 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(2437305..2438339) Methylovorus glucosetrophus SIP3-4 8174321 YP_003052079.1 CDS Msip34_2310 NC_012969.1 2438393 2439244 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_2281 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(2438393..2439244) Methylovorus glucosetrophus SIP3-4 8174322 YP_003052080.1 CDS Msip34_2311 NC_012969.1 2439362 2440885 D KEGG: mfa:Mfla_2282 putative lipoprotein-like protein; putative lipoprotein-like protein 2439362..2440885 Methylovorus glucosetrophus SIP3-4 8174323 YP_003052081.1 CDS Msip34_2312 NC_012969.1 2440891 2441226 D PFAM: protein of unknown function UPF0102; KEGG: mfa:Mfla_2283 hypothetical protein; hypothetical protein 2440891..2441226 Methylovorus glucosetrophus SIP3-4 8174324 YP_003052082.1 CDS Msip34_2313 NC_012969.1 2441244 2441834 D KEGG: mfa:Mfla_2284 phosphoheptose isomerase; phosphoheptose isomerase 2441244..2441834 Methylovorus glucosetrophus SIP3-4 8174325 YP_003052083.1 CDS Msip34_2314 NC_012969.1 2441837 2442406 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_2285 transport-associated; transporter 2441837..2442406 Methylovorus glucosetrophus SIP3-4 8174326 YP_003052084.1 CDS Msip34_2315 NC_012969.1 2442457 2442753 D KEGG: mfa:Mfla_2286 hypothetical protein; hypothetical protein 2442457..2442753 Methylovorus glucosetrophus SIP3-4 8174327 YP_003052085.1 CDS Msip34_2316 NC_012969.1 2442837 2443295 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2118 thioredoxin; alkyl hydroperoxide reductase complement(2442837..2443295) Methylovorus glucosetrophus SIP3-4 8174328 YP_003052086.1 CDS Msip34_2317 NC_012969.1 2443298 2443921 R PFAM: conserved hypothetical protein; KEGG: tcx:Tcr_0411 hypothetical protein; hypothetical protein complement(2443298..2443921) Methylovorus glucosetrophus SIP3-4 8174329 YP_003052087.1 CDS Msip34_2318 NC_012969.1 2444050 2445609 D KEGG: mfa:Mfla_2287 hypothetical protein; hypothetical protein 2444050..2445609 Methylovorus glucosetrophus SIP3-4 8174330 YP_003052088.1 CDS Msip34_2319 NC_012969.1 2445606 2446859 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_2288 diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(2445606..2446859) Methylovorus glucosetrophus SIP3-4 8174331 YP_003052089.1 CDS Msip34_2320 NC_012969.1 2447029 2447355 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mfa:Mfla_2289 thioredoxin; thioredoxin 2447029..2447355 Methylovorus glucosetrophus SIP3-4 8174332 YP_003052090.1 CDS rho NC_012969.1 2447496 2448755 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2447496..2448755 Methylovorus glucosetrophus SIP3-4 8174333 YP_003052091.1 CDS Msip34_2322 NC_012969.1 2448932 2449174 D TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: mfa:Mfla_2291 50S ribosomal protein L31P; 50S ribosomal protein L31 2448932..2449174 Methylovorus glucosetrophus SIP3-4 8174334 YP_003052092.1 CDS Msip34_2323 NC_012969.1 2449307 2450956 D KEGG: mfa:Mfla_2292 glycosyl transferase family protein; glycosyl transferase family protein 2449307..2450956 Methylovorus glucosetrophus SIP3-4 8174335 YP_003052093.1 CDS Msip34_2324 NC_012969.1 2451012 2452094 R KEGG: sit:TM1040_3662 molybdate ABC transporter ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(2451012..2452094) Methylovorus glucosetrophus SIP3-4 8174336 YP_003052094.1 CDS Msip34_2325 NC_012969.1 2452081 2452794 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_3645 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit complement(2452081..2452794) Methylovorus glucosetrophus SIP3-4 8174337 YP_003052095.1 CDS Msip34_2326 NC_012969.1 2452807 2453562 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: abb:ABBFA_001744 molybdate ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2452807..2453562) Methylovorus glucosetrophus SIP3-4 8174338 YP_003052096.1 CDS Msip34_2327 NC_012969.1 2453584 2455104 R PFAM: phosphate-selective porin O and P; KEGG: nmu:Nmul_A2678 phosphate-selective porin O and P; phosphate-selective porin O and P complement(2453584..2455104) Methylovorus glucosetrophus SIP3-4 8174339 YP_003052097.1 CDS Msip34_2328 NC_012969.1 2455235 2455570 R PFAM: regulatory protein LysR; KEGG: mfa:Mfla_2293 ModE family transcriptional regulator; putative ModE family transcriptional regulator complement(2455235..2455570) Methylovorus glucosetrophus SIP3-4 8174340 YP_003052098.1 CDS Msip34_2329 NC_012969.1 2455730 2456740 D KEGG: mfa:Mfla_2294 molybdenum cofactor synthesis-like protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2455730..2456740 Methylovorus glucosetrophus SIP3-4 8174341 YP_003052099.1 CDS Msip34_2330 NC_012969.1 2456790 2457368 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mfa:Mfla_2295 molybdenum cofactor guanylyltransferase; molybdopterin-guanine dinucleotide biosynthesis protein A 2456790..2457368 Methylovorus glucosetrophus SIP3-4 8174342 YP_003052100.1 CDS Msip34_2331 NC_012969.1 2457372 2457917 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mfa:Mfla_2296 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 2457372..2457917 Methylovorus glucosetrophus SIP3-4 8174343 YP_003052101.1 CDS Msip34_2332 NC_012969.1 2457940 2459220 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: mfa:Mfla_2297 molybdopterin molybdochelatase; molybdenum cofactor synthesis domain-containing protein 2457940..2459220 Methylovorus glucosetrophus SIP3-4 8174344 YP_003052102.1 CDS Msip34_2333 NC_012969.1 2459262 2459645 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0746 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(2459262..2459645) Methylovorus glucosetrophus SIP3-4 8174345 YP_003052103.1 CDS Msip34_2334 NC_012969.1 2459830 2461929 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_2301 TonB-dependent receptor; TonB-dependent receptor 2459830..2461929 Methylovorus glucosetrophus SIP3-4 8174346 YP_003052104.1 CDS Msip34_2335 NC_012969.1 2462154 2462975 D PFAM: Sulphur oxidation protein SoxZ; KEGG: mfa:Mfla_2579 hypothetical protein; sulfur oxidation protein SoxZ 2462154..2462975 Methylovorus glucosetrophus SIP3-4 8174347 YP_003052105.1 CDS Msip34_2336 NC_012969.1 2463058 2463585 R PFAM: cytochrome B561; KEGG: mfa:Mfla_2303 cytochrome b561; cytochrome B561 complement(2463058..2463585) Methylovorus glucosetrophus SIP3-4 8174348 YP_003052106.1 CDS Msip34_2337 NC_012969.1 2463845 2464756 D PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_2305 beta-lactamase-like protein; beta-lactamase domain-containing protein 2463845..2464756 Methylovorus glucosetrophus SIP3-4 8174349 YP_003052107.1 CDS Msip34_2338 NC_012969.1 2464753 2464866 D hypothetical protein 2464753..2464866 Methylovorus glucosetrophus SIP3-4 8174350 YP_003052108.1 CDS Msip34_2339 NC_012969.1 2464915 2465688 D TIGRFAM: TonB family protein; KEGG: mfa:Mfla_2306 TonB-like protein; TonB family protein 2464915..2465688 Methylovorus glucosetrophus SIP3-4 8174351 YP_003052109.1 CDS Msip34_2340 NC_012969.1 2465691 2467157 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2307 periplasmic sensor signal transduction histidine kinase; histidine kinase 2465691..2467157 Methylovorus glucosetrophus SIP3-4 8174352 YP_003052110.1 CDS Msip34_2341 NC_012969.1 2467253 2467705 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_2308 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2467253..2467705 Methylovorus glucosetrophus SIP3-4 8174353 YP_003052111.1 CDS Msip34_2342 NC_012969.1 2467741 2469138 D PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: mfa:Mfla_2309 PhoH-like protein; PhoH family protein 2467741..2469138 Methylovorus glucosetrophus SIP3-4 8174354 YP_003052112.1 CDS Msip34_2343 NC_012969.1 2469199 2470362 D PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2310 lysophospholipid transporter LplT; lysophospholipid transporter LplT 2469199..2470362 Methylovorus glucosetrophus SIP3-4 8174355 YP_003052113.1 CDS Msip34_2344 NC_012969.1 2470456 2471796 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mfa:Mfla_2311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2470456..2471796) Methylovorus glucosetrophus SIP3-4 8174356 YP_003052114.1 CDS Msip34_2345 NC_012969.1 2471818 2472357 R PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I; class I cytochrome c complement(2471818..2472357) Methylovorus glucosetrophus SIP3-4 8174357 YP_003052115.1 CDS Msip34_2346 NC_012969.1 2472483 2472989 R PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I; class I cytochrome c complement(2472483..2472989) Methylovorus glucosetrophus SIP3-4 8174358 YP_003052116.1 CDS Msip34_2347 NC_012969.1 2473113 2474027 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mfa:Mfla_2313 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(2473113..2474027) Methylovorus glucosetrophus SIP3-4 8174359 YP_003052117.1 CDS Msip34_2348 NC_012969.1 2474162 2476039 R KEGG: mfa:Mfla_2314 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase complement(2474162..2476039) Methylovorus glucosetrophus SIP3-4 8174360 YP_003052118.1 CDS Msip34_2349 NC_012969.1 2476318 2477268 D KEGG: mfa:Mfla_2315 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 2476318..2477268 Methylovorus glucosetrophus SIP3-4 8174361 YP_003052119.1 CDS Msip34_2350 NC_012969.1 2477363 2478643 D KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein; TIGRFAM: ribonuclease BN; PFAM: cyclic nucleotide-binding; ribonuclease BN; SMART: cyclic nucleotide-binding; cyclic nucleotide-binding protein 2477363..2478643 Methylovorus glucosetrophus SIP3-4 8174362 YP_003052120.1 CDS Msip34_2351 NC_012969.1 2478719 2479717 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2319 rhodanese-like protein; rhodanese domain-containing protein 2478719..2479717 Methylovorus glucosetrophus SIP3-4 8174363 YP_003052121.1 CDS Msip34_2352 NC_012969.1 2479798 2480286 R KEGG: AGP19/ATAGP19 (ARABINOGALACTAN-PROTEIN 19); AGP19/ATAGP19 (arabinogalacta-protein 19) complement(2479798..2480286) Methylovorus glucosetrophus SIP3-4 8174364 YP_003052122.1 CDS Msip34_2353 NC_012969.1 2480477 2481472 R PFAM: Luciferase-like monooxygenase; KEGG: rfr:Rfer_3316 luciferase-like; luciferase-like monooxygenase complement(2480477..2481472) Methylovorus glucosetrophus SIP3-4 8174365 YP_003052123.1 CDS Msip34_2354 NC_012969.1 2481567 2481953 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0609 glyoxalase/bleomycin resistance protein/dioxygenase superfamily; Glyoxalase/bleomycin resistance protein/dioxygenase complement(2481567..2481953) Methylovorus glucosetrophus SIP3-4 8174366 YP_003052124.1 CDS Msip34_2355 NC_012969.1 2482088 2483011 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_01821 putative transcriptional regulator; LysR family transcriptional regulator complement(2482088..2483011) Methylovorus glucosetrophus SIP3-4 8174367 YP_003052125.1 CDS Msip34_2356 NC_012969.1 2483120 2483869 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_4205 short chain dehydrogenase; short chain dehydrogenase 2483120..2483869 Methylovorus glucosetrophus SIP3-4 8174368 YP_003052126.1 CDS Msip34_2357 NC_012969.1 2483953 2484741 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A2852 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2483953..2484741 Methylovorus glucosetrophus SIP3-4 8174369 YP_003052127.1 CDS Msip34_2358 NC_012969.1 2485118 2486617 R KEGG: pmu:PM1539 hypothetical protein; hypothetical protein complement(2485118..2486617) Methylovorus glucosetrophus SIP3-4 8174370 YP_003052128.1 CDS Msip34_2359 NC_012969.1 2486685 2487821 R PFAM: filamentation induced by cAMP protein Fic; KEGG: cja:CJA_1577 fic family protein; filamentation induced by cAMP protein fic complement(2486685..2487821) Methylovorus glucosetrophus SIP3-4 8174371 YP_003052129.1 CDS Msip34_2360 NC_012969.1 2488161 2492519 R KEGG: pla:Plav_1849 hypothetical protein; hypothetical protein complement(2488161..2492519) Methylovorus glucosetrophus SIP3-4 8174372 YP_003052130.1 CDS Msip34_2361 NC_012969.1 2492506 2496444 R KEGG: pla:Plav_1848 hypothetical protein; hypothetical protein complement(2492506..2496444) Methylovorus glucosetrophus SIP3-4 8174373 YP_003052131.1 CDS Msip34_2362 NC_012969.1 2496966 2497724 D PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7223 hypothetical protein; hypothetical protein 2496966..2497724 Methylovorus glucosetrophus SIP3-4 8174374 YP_003052132.1 CDS Msip34_2363 NC_012969.1 2497806 2498495 D KEGG: ade:Adeh_0541 hypothetical protein; hypothetical protein 2497806..2498495 Methylovorus glucosetrophus SIP3-4 8174375 YP_003052133.1 CDS Msip34_2364 NC_012969.1 2498509 2499174 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dar:Daro_2298 two component transcriptional regulator; winged helix family two component transcriptional regulator 2498509..2499174 Methylovorus glucosetrophus SIP3-4 8174376 YP_003052134.1 CDS Msip34_2365 NC_012969.1 2499150 2500496 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_7225 integral membrane sensor signal transduction histidine kinase; histidine kinase 2499150..2500496 Methylovorus glucosetrophus SIP3-4 8174377 YP_003052135.1 CDS Msip34_2366 NC_012969.1 2500785 2501090 R TIGRFAM: addiction module antidote protein, HigA family; KEGG: gme:Gmet_2972 XRE family plasmid maintenance system antidote protein; XRE family plasmid maintenance system antidote protein complement(2500785..2501090) Methylovorus glucosetrophus SIP3-4 8174378 YP_003052136.1 CDS Msip34_2367 NC_012969.1 2501102 2501383 R PFAM: plasmid maintenance system killer; KEGG: ppf:Pput_4191 plasmid maintenance system killer; plasmid maintenance system killer protein complement(2501102..2501383) Methylovorus glucosetrophus SIP3-4 8174379 YP_003052137.1 CDS Msip34_2369 NC_012969.1 2501883 2502104 R KEGG: ccr:CC_3362 hypothetical protein; hypothetical protein complement(2501883..2502104) Methylovorus glucosetrophus SIP3-4 8174381 YP_003052138.1 CDS Msip34_2370 NC_012969.1 2502108 2502392 R hypothetical protein complement(2502108..2502392) Methylovorus glucosetrophus SIP3-4 8174382 YP_003052139.1 CDS Msip34_2372 NC_012969.1 2502763 2503041 R KEGG: xfn:XfasM23_2207 putative transcriptional regulator; putative addiction module antidote protein complement(2502763..2503041) Methylovorus glucosetrophus SIP3-4 8173767 YP_003052140.1 CDS Msip34_2373 NC_012969.1 2503105 2503497 R hypothetical protein complement(2503105..2503497) Methylovorus glucosetrophus SIP3-4 8174384 YP_003052141.1 CDS Msip34_2374 NC_012969.1 2503508 2504626 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: xoo:XOO0605 TraH protein; TrbL/VirB6 plasmid conjugal transfer protein complement(2503508..2504626) Methylovorus glucosetrophus SIP3-4 8174385 YP_003052142.1 CDS Msip34_2375 NC_012969.1 2504653 2504973 R hypothetical protein complement(2504653..2504973) Methylovorus glucosetrophus SIP3-4 8174386 YP_003052143.1 CDS Msip34_2376 NC_012969.1 2505224 2506261 R KEGG: bbr:BB0493 plasmid-related protein; hypothetical protein complement(2505224..2506261) Methylovorus glucosetrophus SIP3-4 8174387 YP_003052144.1 CDS Msip34_2380 NC_012969.1 2508883 2510799 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: mfa:Mfla_2322 sigma 70 (RpoD); RNA polymerase sigma-70 subunit RpoD complement(2508883..2510799) Methylovorus glucosetrophus SIP3-4 8174392 YP_003052145.1 CDS Msip34_2381 NC_012969.1 2510866 2512620 R KEGG: mfa:Mfla_2323 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase complement(2510866..2512620) Methylovorus glucosetrophus SIP3-4 8174393 YP_003052146.1 CDS Msip34_2382 NC_012969.1 2512734 2513180 R KEGG: mfa:Mfla_2324 hypothetical protein; hypothetical protein complement(2512734..2513180) Methylovorus glucosetrophus SIP3-4 8174394 YP_003052147.1 CDS Msip34_2383 NC_012969.1 2513265 2513477 R TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: mfa:Mfla_2325 SSU ribosomal protein S21P; 30S ribosomal protein S21 complement(2513265..2513477) Methylovorus glucosetrophus SIP3-4 8174395 YP_003052148.1 CDS Msip34_2384 NC_012969.1 2513609 2514649 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2513609..2514649 Methylovorus glucosetrophus SIP3-4 8174396 YP_003052149.1 CDS Msip34_2385 NC_012969.1 2514653 2515243 R PFAM: protein of unknown function DUF205; KEGG: mfa:Mfla_2327 acyl-phosphate glycerol-3-phosphate acyltransferase; hypothetical protein complement(2514653..2515243) Methylovorus glucosetrophus SIP3-4 8174397 YP_003052150.1 CDS Msip34_2386 NC_012969.1 2515415 2515765 D TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: mfa:Mfla_2328 dihydroneopterin aldolase; dihydroneopterin aldolase 2515415..2515765 Methylovorus glucosetrophus SIP3-4 8174398 YP_003052151.1 CDS Msip34_2387 NC_012969.1 2515809 2516861 D KEGG: mfa:Mfla_2004 hypothetical protein; hypothetical protein 2515809..2516861 Methylovorus glucosetrophus SIP3-4 8174399 YP_003052152.1 CDS Msip34_2388 NC_012969.1 2516858 2517238 D KEGG: mfa:Mfla_1738 hypothetical protein; hypothetical protein 2516858..2517238 Methylovorus glucosetrophus SIP3-4 8174400 YP_003052153.1 CDS Msip34_2389 NC_012969.1 2517262 2518158 R TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mfa:Mfla_2329 tyrosine recombinase XerD; tyrosine recombinase XerD complement(2517262..2518158) Methylovorus glucosetrophus SIP3-4 8174401 YP_003052154.1 CDS Msip34_2390 NC_012969.1 2518155 2518670 R TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mfa:Mfla_2330 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(2518155..2518670) Methylovorus glucosetrophus SIP3-4 8174402 YP_003052155.1 CDS rplS NC_012969.1 2518748 2519131 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2518748..2519131) Methylovorus glucosetrophus SIP3-4 8174403 YP_003052156.1 CDS Msip34_2392 NC_012969.1 2519149 2519961 R KEGG: mfa:Mfla_2332 tRNA (guanine37-N1) methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase complement(2519149..2519961) Methylovorus glucosetrophus SIP3-4 8174404 YP_003052157.1 CDS Msip34_2393 NC_012969.1 2519961 2520455 R TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: mfa:Mfla_2333 16S rRNA processing protein RimM; 16S rRNA processing protein RimM complement(2519961..2520455) Methylovorus glucosetrophus SIP3-4 8174405 YP_003052158.1 CDS Msip34_2394 NC_012969.1 2520499 2520750 R TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: mfa:Mfla_2334 SSU ribosomal protein S16P; 30S ribosomal protein S16 complement(2520499..2520750) Methylovorus glucosetrophus SIP3-4 8174406 YP_003052159.1 CDS Msip34_2395 NC_012969.1 2520862 2521539 R TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mfa:Mfla_2335 ExsB; exsB protein complement(2520862..2521539) Methylovorus glucosetrophus SIP3-4 8174407 YP_003052160.1 CDS Msip34_2396 NC_012969.1 2521541 2522179 R PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_2336 radical SAM family protein; radical SAM protein complement(2521541..2522179) Methylovorus glucosetrophus SIP3-4 8174408 YP_003052161.1 CDS Msip34_2397 NC_012969.1 2522281 2523093 R KEGG: mfa:Mfla_2337 tetratricopeptide region; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; tol-pal system protein YbgF complement(2522281..2523093) Methylovorus glucosetrophus SIP3-4 8174409 YP_003052162.1 CDS Msip34_2398 NC_012969.1 2523100 2523636 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_2338 OmpA/MotB; peptidoglycan-associated lipoprotein complement(2523100..2523636) Methylovorus glucosetrophus SIP3-4 8174410 YP_003052163.1 CDS Msip34_2399 NC_012969.1 2523711 2524985 R TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: mfa:Mfla_2339 TolB-like protein; Tol-Pal system beta propeller repeat-containing protein TolB complement(2523711..2524985) Methylovorus glucosetrophus SIP3-4 8174411 YP_003052164.1 CDS Msip34_2400 NC_012969.1 2525054 2525836 R TIGRFAM: protein TolA; KEGG: mfa:Mfla_2340 hypothetical protein; protein TolA complement(2525054..2525836) Methylovorus glucosetrophus SIP3-4 8174412 YP_003052165.1 CDS Msip34_2401 NC_012969.1 2525843 2526229 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_2341 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(2525843..2526229) Methylovorus glucosetrophus SIP3-4 8174413 YP_003052166.1 CDS Msip34_2402 NC_012969.1 2526239 2526913 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_2342 MotA/TolQ/ExbB proton channel; protein TolQ complement(2526239..2526913) Methylovorus glucosetrophus SIP3-4 8174414 YP_003052167.1 CDS Msip34_2403 NC_012969.1 2526913 2527347 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mfa:Mfla_2343 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(2526913..2527347) Methylovorus glucosetrophus SIP3-4 8174415 YP_003052168.1 CDS ruvB NC_012969.1 2527335 2528372 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2527335..2528372) Methylovorus glucosetrophus SIP3-4 8174416 YP_003052169.1 CDS Msip34_2405 NC_012969.1 2528394 2528972 R KEGG: mfa:Mfla_2353 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA complement(2528394..2528972) Methylovorus glucosetrophus SIP3-4 8174417 YP_003052170.1 CDS ruvC NC_012969.1 2529046 2529582 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(2529046..2529582) Methylovorus glucosetrophus SIP3-4 8174418 YP_003052171.1 CDS Msip34_2407 NC_012969.1 2529611 2530336 R PFAM: protein of unknown function DUF28; KEGG: mfa:Mfla_2355 hypothetical protein; hypothetical protein complement(2529611..2530336) Methylovorus glucosetrophus SIP3-4 8174419 YP_003052172.1 CDS Msip34_2408 NC_012969.1 2530445 2531362 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_2356 hypothetical protein; hypothetical protein complement(2530445..2531362) Methylovorus glucosetrophus SIP3-4 8174420 YP_003052173.1 CDS Msip34_2409 NC_012969.1 2531373 2531756 R KEGG: mfa:Mfla_2357 putative signal peptide protein; putative signal peptide protein complement(2531373..2531756) Methylovorus glucosetrophus SIP3-4 8174421 YP_003052174.1 CDS Msip34_2410 NC_012969.1 2531806 2532327 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2359 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2531806..2532327) Methylovorus glucosetrophus SIP3-4 8174422 YP_003052175.1 CDS Msip34_2411 NC_012969.1 2532496 2532924 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mfa:Mfla_2360 signal-transduction protein; putative signal transduction protein 2532496..2532924 Methylovorus glucosetrophus SIP3-4 8174423 YP_003052176.1 CDS Msip34_2412 NC_012969.1 2532974 2534821 R TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mfa:Mfla_2361 potassium efflux system protein; potassium efflux system protein complement(2532974..2534821) Methylovorus glucosetrophus SIP3-4 8174424 YP_003052177.1 CDS Msip34_2413 NC_012969.1 2534824 2535420 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mfa:Mfla_2362 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2534824..2535420) Methylovorus glucosetrophus SIP3-4 8174425 YP_003052178.1 CDS Msip34_2414 NC_012969.1 2535420 2535620 R KEGG: pna:Pnap_3867 hypothetical protein; hypothetical protein complement(2535420..2535620) Methylovorus glucosetrophus SIP3-4 8174426 YP_003052179.1 CDS Msip34_2415 NC_012969.1 2535626 2536045 R PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2363 hypothetical protein; hypothetical protein complement(2535626..2536045) Methylovorus glucosetrophus SIP3-4 8174427 YP_003052180.1 CDS Msip34_2416 NC_012969.1 2536169 2536717 R TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2364 putative formaldehyde-activating enzyme; formaldehyde-activating protein complement(2536169..2536717) Methylovorus glucosetrophus SIP3-4 8174428 YP_003052181.1 CDS Msip34_2417 NC_012969.1 2536845 2537552 R KEGG: mfa:Mfla_0438 hypothetical protein; hypothetical protein complement(2536845..2537552) Methylovorus glucosetrophus SIP3-4 8174429 YP_003052182.1 CDS Msip34_2418 NC_012969.1 2537708 2537932 R KEGG: mfa:Mfla_1357 hypothetical protein; hypothetical protein complement(2537708..2537932) Methylovorus glucosetrophus SIP3-4 8174430 YP_003052183.1 CDS Msip34_2419 NC_012969.1 2538167 2539180 D KEGG: swd:Swoo_4383 hypothetical protein; hypothetical protein 2538167..2539180 Methylovorus glucosetrophus SIP3-4 8174431 YP_003052184.1 CDS Msip34_2420 NC_012969.1 2539256 2542132 D PFAM: TPR repeat-containing protein; transglutaminase domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hch:HCH_06920 hypothetical protein; hypothetical protein 2539256..2542132 Methylovorus glucosetrophus SIP3-4 8174432 YP_003052185.1 CDS Msip34_2421 NC_012969.1 2542232 2543566 R PFAM: ferredoxin-dependent glutamate synthase; FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mfa:Mfla_0459 glutamate synthase (NADPH) GltB2 subunit; ferredoxin-dependent glutamate synthase complement(2542232..2543566) Methylovorus glucosetrophus SIP3-4 8174433 YP_003052186.1 CDS Msip34_2422 NC_012969.1 2543568 2544260 R PFAM: glutamate synthase alpha subunit domain protein; KEGG: mfa:Mfla_0458 glutamate synthase (NADPH) GltB3 subunit; glutamate synthase subunit alpha domain-containing protein complement(2543568..2544260) Methylovorus glucosetrophus SIP3-4 8174434 YP_003052187.1 CDS Msip34_2423 NC_012969.1 2544248 2545144 R PFAM: glutamine amidotransferase class-II; KEGG: mfa:Mfla_0457 glutamate synthase (NADPH) GltB1 subunit; glutamine amidotransferase complement(2544248..2545144) Methylovorus glucosetrophus SIP3-4 8174435 YP_003052188.1 CDS Msip34_2424 NC_012969.1 2545232 2546566 R TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mfa:Mfla_0456 L-glutamine synthetase; glutamine synthetase complement(2545232..2546566) Methylovorus glucosetrophus SIP3-4 8174436 YP_003052189.1 CDS Msip34_2425 NC_012969.1 2546615 2547274 R PFAM: Sarcosine oxidase gamma subunit; KEGG: mfa:Mfla_0455 hypothetical protein; sarcosine oxidase subunit gamma complement(2546615..2547274) Methylovorus glucosetrophus SIP3-4 8174437 YP_003052190.1 CDS Msip34_2426 NC_012969.1 2547277 2550177 R PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; FAD dependent oxidoreductase; KEGG: mfa:Mfla_0454 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) complement(2547277..2550177) Methylovorus glucosetrophus SIP3-4 8174438 YP_003052191.1 CDS Msip34_2427 NC_012969.1 2550174 2550437 R PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mfa:Mfla_0453 sarcosine oxidase, delta subunit, heterotetrameric; sarcosine oxidase subunit delta complement(2550174..2550437) Methylovorus glucosetrophus SIP3-4 8174439 YP_003052192.1 CDS Msip34_2428 NC_012969.1 2550484 2551725 R PFAM: FAD dependent oxidoreductase; KEGG: mfa:Mfla_0452 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2550484..2551725) Methylovorus glucosetrophus SIP3-4 8174440 YP_003052193.1 CDS Msip34_2429 NC_012969.1 2551940 2552587 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: mfa:Mfla_0437 transcriptional regulator; XRE family transcriptional regulator 2551940..2552587 Methylovorus glucosetrophus SIP3-4 8174441 YP_003052194.1 CDS Msip34_2430 NC_012969.1 2552590 2553057 D PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_0436 acetyltransferase; N-acetyltransferase GCN5 2552590..2553057 Methylovorus glucosetrophus SIP3-4 8174442 YP_003052195.1 CDS Msip34_2431 NC_012969.1 2553326 2554441 D PFAM: protein of unknown function DUF140; KEGG: mfa:Mfla_2365 hypothetical protein; hypothetical protein 2553326..2554441 Methylovorus glucosetrophus SIP3-4 8174443 YP_003052196.1 CDS Msip34_2432 NC_012969.1 2554438 2555232 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2366 ABC transporter related; ABC transporter-like protein 2554438..2555232 Methylovorus glucosetrophus SIP3-4 8174444 YP_003052197.1 CDS Msip34_2433 NC_012969.1 2555239 2556183 D PFAM: Mammalian cell entry related domain protein; KEGG: mfa:Mfla_2368 hypothetical protein; mammalian cell entry domain-containing protein 2555239..2556183 Methylovorus glucosetrophus SIP3-4 8174445 YP_003052198.1 CDS Msip34_2434 NC_012969.1 2556212 2556787 D PFAM: protein of unknown function DUF330; KEGG: mfa:Mfla_2369 putative lipoprotein; hypothetical protein 2556212..2556787 Methylovorus glucosetrophus SIP3-4 8174446 YP_003052199.1 CDS Msip34_2435 NC_012969.1 2556801 2558678 R KEGG: bcn:Bcen_1409 Sel1 repeat-containing protein; Sel1 repeat-containing protein complement(2556801..2558678) Methylovorus glucosetrophus SIP3-4 8174447 YP_003052200.1 CDS Msip34_2436 NC_012969.1 2558678 2560720 R SMART: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_B2594 putative phospholipase; phospholipase D/transphosphatidylase complement(2558678..2560720) Methylovorus glucosetrophus SIP3-4 8174448 YP_003052201.1 CDS Msip34_2437 NC_012969.1 2560946 2563201 R KEGG: dar:Daro_2048 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2560946..2563201) Methylovorus glucosetrophus SIP3-4 8174449 YP_003052202.1 CDS Msip34_2438 NC_012969.1 2563380 2564318 D PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: mpt:Mpe_A2183 hypothetical protein; diacylglycerol kinase catalytic subunit 2563380..2564318 Methylovorus glucosetrophus SIP3-4 8174450 YP_003052203.1 CDS Msip34_2439 NC_012969.1 2564331 2565137 D PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A2182 putative DNA repair exonuclease; metallophosphoesterase 2564331..2565137 Methylovorus glucosetrophus SIP3-4 8174451 YP_003052204.1 CDS Msip34_2440 NC_012969.1 2565134 2565910 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pna:Pnap_3543 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2565134..2565910 Methylovorus glucosetrophus SIP3-4 8174452 YP_003052205.1 CDS Msip34_2441 NC_012969.1 2565963 2567885 D KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC/GAF sensor-containing diguanylate cyclase 2565963..2567885 Methylovorus glucosetrophus SIP3-4 8174453 YP_003052206.1 CDS Msip34_2442 NC_012969.1 2567983 2568573 R PFAM: protein of unknown function DUF1555; KEGG: nmu:Nmul_A1889 hypothetical protein; hypothetical protein complement(2567983..2568573) Methylovorus glucosetrophus SIP3-4 8174454 YP_003052207.1 CDS Msip34_2443 NC_012969.1 2568795 2570870 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_3689 TonB-dependent receptor; TonB-dependent receptor 2568795..2570870 Methylovorus glucosetrophus SIP3-4 8174455 YP_003052208.1 CDS Msip34_2444 NC_012969.1 2571350 2571496 R hypothetical protein complement(2571350..2571496) Methylovorus glucosetrophus SIP3-4 8174456 YP_003052209.1 CDS Msip34_2445 NC_012969.1 2571961 2572479 R PFAM: RDD domain containing protein; KEGG: swp:swp_4308 membrane protein/domain, putative; RDD domain-containing protein complement(2571961..2572479) Methylovorus glucosetrophus SIP3-4 8174457 YP_003052210.1 CDS Msip34_2446 NC_012969.1 2572913 2574070 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: mfa:Mfla_2379 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(2572913..2574070) Methylovorus glucosetrophus SIP3-4 8174459 YP_003052211.1 CDS Msip34_2447 NC_012969.1 2574067 2574819 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_2380 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(2574067..2574819) Methylovorus glucosetrophus SIP3-4 8174460 YP_003052212.1 CDS Msip34_2448 NC_012969.1 2574880 2575977 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2574880..2575977) Methylovorus glucosetrophus SIP3-4 8174461 YP_003052213.1 CDS ntpA NC_012969.1 2576064 2576531 R converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase complement(2576064..2576531) Methylovorus glucosetrophus SIP3-4 8174462 YP_003052214.1 CDS Msip34_2450 NC_012969.1 2576611 2577138 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(2576611..2577138) Methylovorus glucosetrophus SIP3-4 8174463 YP_003052215.1 CDS Msip34_2451 NC_012969.1 2577143 2577583 R KEGG: csa:Csal_1992 hypothetical protein; hypothetical protein complement(2577143..2577583) Methylovorus glucosetrophus SIP3-4 8173686 YP_003052216.1 CDS aspS NC_012969.1 2577689 2579473 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(2577689..2579473) Methylovorus glucosetrophus SIP3-4 8173687 YP_003052217.1 CDS Msip34_2453 NC_012969.1 2579484 2580104 R PFAM: protein of unknown function DUF502; KEGG: mfa:Mfla_2385 hypothetical protein; hypothetical protein complement(2579484..2580104) Methylovorus glucosetrophus SIP3-4 8173688 YP_003052218.1 CDS Msip34_2454 NC_012969.1 2580127 2580381 R TIGRFAM: regulatory protein, FmdB family; KEGG: mfa:Mfla_2386 hypothetical protein; FmdB family regulatory protein complement(2580127..2580381) Methylovorus glucosetrophus SIP3-4 8173689 YP_003052219.1 CDS Msip34_2455 NC_012969.1 2580578 2581540 R PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_5956 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha complement(2580578..2581540) Methylovorus glucosetrophus SIP3-4 8173690 YP_003052220.1 CDS Msip34_2456 NC_012969.1 2581537 2582340 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_5957 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein subunits alpha/beta complement(2581537..2582340) Methylovorus glucosetrophus SIP3-4 8173691 YP_003052221.1 CDS Msip34_2457 NC_012969.1 2582337 2583770 R KEGG: bph:Bphy_5958 leucine-rich repeat-containing protein; hypothetical protein complement(2582337..2583770) Methylovorus glucosetrophus SIP3-4 8173692 YP_003052222.1 CDS Msip34_2458 NC_012969.1 2583739 2585862 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bph:Bphy_5959 hypothetical protein; hypothetical protein complement(2583739..2585862) Methylovorus glucosetrophus SIP3-4 8173693 YP_003052223.1 CDS Msip34_2459 NC_012969.1 2585972 2588164 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bph:Bphy_5960 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(2585972..2588164) Methylovorus glucosetrophus SIP3-4 8173694 YP_003052224.1 CDS Msip34_2460 NC_012969.1 2588363 2590060 R PFAM: amino acid permease-associated region; KEGG: mfa:Mfla_0446 amino acid permease-associated region; amino acid permease-associated protein complement(2588363..2590060) Methylovorus glucosetrophus SIP3-4 8173695 YP_003052225.1 CDS Msip34_2461 NC_012969.1 2590376 2591452 D KEGG: pca:Pcar_0941 hypothetical protein; hypothetical protein 2590376..2591452 Methylovorus glucosetrophus SIP3-4 8173696 YP_003052226.1 CDS Msip34_2462 NC_012969.1 2591449 2591778 D hypothetical protein 2591449..2591778 Methylovorus glucosetrophus SIP3-4 8173697 YP_003052227.1 CDS Msip34_2463 NC_012969.1 2591775 2591885 D hypothetical protein 2591775..2591885 Methylovorus glucosetrophus SIP3-4 8173698 YP_003052228.1 CDS Msip34_2464 NC_012969.1 2591917 2592615 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0445 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(2591917..2592615) Methylovorus glucosetrophus SIP3-4 8173699 YP_003052229.1 CDS Msip34_2465 NC_012969.1 2592631 2594457 R KEGG: mfa:Mfla_0444 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase complement(2592631..2594457) Methylovorus glucosetrophus SIP3-4 8173700 YP_003052230.1 CDS Msip34_2466 NC_012969.1 2594505 2595905 D KEGG: mfa:Mfla_0443 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 2594505..2595905 Methylovorus glucosetrophus SIP3-4 8173701 YP_003052231.1 CDS Msip34_2467 NC_012969.1 2595961 2596761 R KEGG: mfa:Mfla_0546 hypothetical protein; hypothetical protein complement(2595961..2596761) Methylovorus glucosetrophus SIP3-4 8173702 YP_003052232.1 CDS Msip34_2468 NC_012969.1 2596831 2597871 R KEGG: mfa:Mfla_0442 hypothetical protein; hypothetical protein complement(2596831..2597871) Methylovorus glucosetrophus SIP3-4 8173703 YP_003052233.1 CDS Msip34_2469 NC_012969.1 2597883 2598836 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0441 ferredoxin; ferredoxin complement(2597883..2598836) Methylovorus glucosetrophus SIP3-4 8173704 YP_003052234.1 CDS Msip34_2470 NC_012969.1 2598833 2599432 R KEGG: mfa:Mfla_0440 hypothetical protein; hypothetical protein complement(2598833..2599432) Methylovorus glucosetrophus SIP3-4 8173705 YP_003052235.1 CDS Msip34_2471 NC_012969.1 2599486 2600601 R PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mfa:Mfla_0439 aminomethyltransferase; glycine cleavage T protein (aminomethyl transferase) complement(2599486..2600601) Methylovorus glucosetrophus SIP3-4 8173706 YP_003052236.1 CDS Msip34_2472 NC_012969.1 2600863 2603715 D KEGG: mfa:Mfla_2628 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; NMT1/THI5 like domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2600863..2603715 Methylovorus glucosetrophus SIP3-4 8173707 YP_003052237.1 CDS Msip34_2473 NC_012969.1 2603770 2605185 R PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cti:RALTA_A0497 putative sensor histidine kinase; histidine kinase complement(2603770..2605185) Methylovorus glucosetrophus SIP3-4 8173708 YP_003052238.1 CDS Msip34_2474 NC_012969.1 2605182 2605853 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: tmz:Tmz1t_1421 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(2605182..2605853) Methylovorus glucosetrophus SIP3-4 8173709 YP_003052239.1 CDS Msip34_2475 NC_012969.1 2606047 2606493 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: asa:ASA_4171 hypothetical protein; Activator of Hsp90 ATPase 1 family protein 2606047..2606493 Methylovorus glucosetrophus SIP3-4 8173710 YP_003052240.1 CDS Msip34_2476 NC_012969.1 2606552 2606920 D KEGG: abu:Abu_0949 hypothetical protein; hypothetical protein 2606552..2606920 Methylovorus glucosetrophus SIP3-4 8173711 YP_003052241.1 CDS Msip34_2477 NC_012969.1 2607229 2608167 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A0871 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2607229..2608167) Methylovorus glucosetrophus SIP3-4 8173714 YP_003052242.1 CDS Msip34_2478 NC_012969.1 2608308 2609063 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afw:Anae109_3255 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2608308..2609063 Methylovorus glucosetrophus SIP3-4 8173715 YP_003052243.1 CDS Msip34_2479 NC_012969.1 2609110 2609916 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: dac:Daci_5138 alpha/beta hydrolase domain-containing protein; Alpha/beta hydrolase fold-3 domain-containing protein 2609110..2609916 Methylovorus glucosetrophus SIP3-4 8173716 YP_003052244.1 CDS Msip34_2480 NC_012969.1 2609987 2611222 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1564 multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit 2609987..2611222 Methylovorus glucosetrophus SIP3-4 8173717 YP_003052245.1 CDS Msip34_2481 NC_012969.1 2611258 2614467 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mms:mma_1565 multidrug-efflux system protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2611258..2614467 Methylovorus glucosetrophus SIP3-4 8173718 YP_003052246.1 CDS Msip34_2482 NC_012969.1 2614464 2615888 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_1566 outer-membrane drug efflux protein; NodT family RND efflux system outer membrane lipoprotein 2614464..2615888 Methylovorus glucosetrophus SIP3-4 8173719 YP_003052247.1 CDS Msip34_2483 NC_012969.1 2615965 2616831 R PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_1217 transcription activator, effector binding; AraC family transcriptional regulator complement(2615965..2616831) Methylovorus glucosetrophus SIP3-4 8173720 YP_003052248.1 CDS Msip34_2484 NC_012969.1 2616860 2617051 D hypothetical protein 2616860..2617051 Methylovorus glucosetrophus SIP3-4 8173721 YP_003052249.1 CDS Msip34_2485 NC_012969.1 2617059 2617556 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_2424 single-strand binding protein; ssDNA-binding protein complement(2617059..2617556) Methylovorus glucosetrophus SIP3-4 8173722 YP_003052250.1 CDS Msip34_2486 NC_012969.1 2617559 2618935 R PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: mfa:Mfla_2425 major facilitator transporter; major facilitator superfamily protein complement(2617559..2618935) Methylovorus glucosetrophus SIP3-4 8173723 YP_003052251.1 CDS Msip34_2487 NC_012969.1 2619163 2621976 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: mfa:Mfla_2426 excinuclease ABC subunit A; excinuclease ABC subunit A 2619163..2621976 Methylovorus glucosetrophus SIP3-4 8173724 YP_003052252.1 CDS Msip34_2488 NC_012969.1 2622044 2622871 R TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: cvi:CV_0094 hypothetical protein; putative signal transduction protein complement(2622044..2622871) Methylovorus glucosetrophus SIP3-4 8173725 YP_003052253.1 CDS mtgA NC_012969.1 2622938 2623630 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(2622938..2623630) Methylovorus glucosetrophus SIP3-4 8173726 YP_003052254.1 CDS Msip34_2490 NC_012969.1 2623627 2624451 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: mfa:Mfla_2445 shikimate dehydrogenase; shikimate 5-dehydrogenase complement(2623627..2624451) Methylovorus glucosetrophus SIP3-4 8173727 YP_003052255.1 CDS Msip34_2491 NC_012969.1 2624470 2624925 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2446 rhodanese-like protein; rhodanese domain-containing protein complement(2624470..2624925) Methylovorus glucosetrophus SIP3-4 8173728 YP_003052256.1 CDS Msip34_2492 NC_012969.1 2625193 2626602 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mfa:Mfla_2447 L-glutamine synthetase; glutamine synthetase 2625193..2626602 Methylovorus glucosetrophus SIP3-4 8173729 YP_003052257.1 CDS Msip34_2493 NC_012969.1 2626717 2627208 D KEGG: mfa:Mfla_2448 hypothetical protein; hypothetical protein 2626717..2627208 Methylovorus glucosetrophus SIP3-4 8173730 YP_003052258.1 CDS Msip34_2494 NC_012969.1 2627332 2628414 D PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: mfa:Mfla_2449 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase NtrB 2627332..2628414 Methylovorus glucosetrophus SIP3-4 8173731 YP_003052259.1 CDS Msip34_2495 NC_012969.1 2628459 2629847 D KEGG: mfa:Mfla_2450 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 2628459..2629847 Methylovorus glucosetrophus SIP3-4 8173732 YP_003052260.1 CDS Msip34_2496 NC_012969.1 2629889 2631031 R PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: lpp:lpp2907 hypothetical protein; hypothetical protein complement(2629889..2631031) Methylovorus glucosetrophus SIP3-4 8173733 YP_003052261.1 CDS Msip34_2497 NC_012969.1 2631122 2631373 R KEGG: pfl:PFL_4147 putative lipoprotein; putative lipoprotein complement(2631122..2631373) Methylovorus glucosetrophus SIP3-4 8173734 YP_003052262.1 CDS Msip34_2498 NC_012969.1 2631442 2632674 R KEGG: mfa:Mfla_2453 hypothetical protein; hypothetical protein complement(2631442..2632674) Methylovorus glucosetrophus SIP3-4 8173735 YP_003052263.1 CDS Msip34_2499 NC_012969.1 2633077 2634204 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(2633077..2634204) Methylovorus glucosetrophus SIP3-4 8173736 YP_003052264.1 CDS Msip34_2500 NC_012969.1 2634201 2635280 R TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; KEGG: mfa:Mfla_2455 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(2634201..2635280) Methylovorus glucosetrophus SIP3-4 8173737 YP_003052265.1 CDS Msip34_2501 NC_012969.1 2635286 2635792 R PFAM: shikimate kinase; KEGG: mfa:Mfla_2456 shikimate kinase; shikimate kinase complement(2635286..2635792) Methylovorus glucosetrophus SIP3-4 8173738 YP_003052266.1 CDS Msip34_2502 NC_012969.1 2635858 2638002 R TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_2457 type II and III secretion system protein; type IV pilus secretin PilQ complement(2635858..2638002) Methylovorus glucosetrophus SIP3-4 8173739 YP_003052267.1 CDS Msip34_2503 NC_012969.1 2638012 2638545 R PFAM: Pilus assembly protein PilP; KEGG: mfa:Mfla_2458 type IV pilus assembly protein PilP; Pilus assembly protein PilP complement(2638012..2638545) Methylovorus glucosetrophus SIP3-4 8173740 YP_003052268.1 CDS Msip34_2504 NC_012969.1 2638560 2639192 R PFAM: Pilus assembly protein PilO; KEGG: mfa:Mfla_2459 pilus assembly protein, PilO; Pilus assembly protein PilO complement(2638560..2639192) Methylovorus glucosetrophus SIP3-4 8173741 YP_003052269.1 CDS Msip34_2505 NC_012969.1 2639189 2639770 R PFAM: Fimbrial assembly family protein; KEGG: mfa:Mfla_2460 fimbrial assembly; fimbrial assembly family protein complement(2639189..2639770) Methylovorus glucosetrophus SIP3-4 8173742 YP_003052270.1 CDS Msip34_2506 NC_012969.1 2639767 2640840 R TIGRFAM: type IV pilus assembly protein PilM; KEGG: mfa:Mfla_2461 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM complement(2639767..2640840) Methylovorus glucosetrophus SIP3-4 8173743 YP_003052271.1 CDS Msip34_2507 NC_012969.1 2641001 2643364 D TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mfa:Mfla_2462 penicillin-binding protein 1A; penicillin-binding protein 2641001..2643364 Methylovorus glucosetrophus SIP3-4 8173744 YP_003052272.1 CDS Msip34_2508 NC_012969.1 2643472 2644131 D KEGG: mfa:Mfla_2463 hypothetical protein; hypothetical protein 2643472..2644131 Methylovorus glucosetrophus SIP3-4 8173745 YP_003052273.1 CDS Msip34_2509 NC_012969.1 2644164 2645168 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(2644164..2645168) Methylovorus glucosetrophus SIP3-4 8173746 YP_003052274.1 CDS Msip34_2510 NC_012969.1 2645182 2645970 R PFAM: Indole-3-glycerol phosphate synthase; KEGG: mfa:Mfla_2465 indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase complement(2645182..2645970) Methylovorus glucosetrophus SIP3-4 8173747 YP_003052275.1 CDS Msip34_2511 NC_012969.1 2646012 2646473 R KEGG: mfa:Mfla_2466 hypothetical protein; hypothetical protein complement(2646012..2646473) Methylovorus glucosetrophus SIP3-4 8173748 YP_003052276.1 CDS Msip34_2512 NC_012969.1 2646470 2647495 R KEGG: mfa:Mfla_2467 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase complement(2646470..2647495) Methylovorus glucosetrophus SIP3-4 8173749 YP_003052277.1 CDS Msip34_2513 NC_012969.1 2647495 2648061 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(2647495..2648061) Methylovorus glucosetrophus SIP3-4 8173750 YP_003052278.1 CDS Msip34_2514 NC_012969.1 2648064 2649578 R KEGG: mfa:Mfla_2471 anthranilate synthase, component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I complement(2648064..2649578) Methylovorus glucosetrophus SIP3-4 8173751 YP_003052279.1 CDS Msip34_2515 NC_012969.1 2649723 2650415 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(2649723..2650415) Methylovorus glucosetrophus SIP3-4 8173752 YP_003052280.1 CDS Msip34_2516 NC_012969.1 2650468 2651166 R KEGG: mfa:Mfla_2472 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2650468..2651166) Methylovorus glucosetrophus SIP3-4 8173753 YP_003052281.1 CDS Msip34_2517 NC_012969.1 2651338 2652585 D KEGG: mfa:Mfla_2473 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; glutamyl-tRNA reductase 2651338..2652585 Methylovorus glucosetrophus SIP3-4 8173754 YP_003052282.1 CDS prfA NC_012969.1 2652595 2653677 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2652595..2653677 Methylovorus glucosetrophus SIP3-4 8173755 YP_003052283.1 CDS Msip34_2519 NC_012969.1 2653684 2654124 D KEGG: mfa:Mfla_2475 hypothetical protein; hypothetical protein 2653684..2654124 Methylovorus glucosetrophus SIP3-4 8173756 YP_003052284.1 CDS Msip34_2520 NC_012969.1 2654128 2655021 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: xcv:XCV0944 protein methyltransferase HemK; HemK family modification methylase 2654128..2655021 Methylovorus glucosetrophus SIP3-4 8173757 YP_003052285.1 CDS Msip34_2521 NC_012969.1 2655153 2655698 R KEGG: pol:Bpro_2033 hypothetical protein; hypothetical protein complement(2655153..2655698) Methylovorus glucosetrophus SIP3-4 8173758 YP_003052286.1 CDS Msip34_2522 NC_012969.1 2655740 2656303 R PFAM: transferase hexapeptide repeat containing protein; KEGG: mfa:Mfla_2479 carbonic anhydrase family 3; transferase complement(2655740..2656303) Methylovorus glucosetrophus SIP3-4 8173759 YP_003052287.1 CDS metX NC_012969.1 2656332 2657471 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 2656332..2657471 Methylovorus glucosetrophus SIP3-4 8173760 YP_003052288.1 CDS Msip34_2524 NC_012969.1 2657468 2658088 D TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: mfa:Mfla_2481 methionine biosynthesis MetW; methionine biosynthesis protein MetW 2657468..2658088 Methylovorus glucosetrophus SIP3-4 8173761 YP_003052289.1 CDS Msip34_2525 NC_012969.1 2658120 2658785 R KEGG: mfa:Mfla_2482 hypothetical protein; hypothetical protein complement(2658120..2658785) Methylovorus glucosetrophus SIP3-4 8173762 YP_003052290.1 CDS Msip34_2526 NC_012969.1 2658800 2660098 D PFAM: major facilitator superfamily MFS_1; KEGG: tau:Tola_0796 AmpG-related permease; major facilitator superfamily protein 2658800..2660098 Methylovorus glucosetrophus SIP3-4 8173763 YP_003052291.1 CDS Msip34_2527 NC_012969.1 2660117 2660899 R KEGG: mfa:Mfla_2484 exodeoxyribonuclease III (xth); TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(2660117..2660899) Methylovorus glucosetrophus SIP3-4 8173764 YP_003052292.1 CDS pyrE NC_012969.1 2660918 2661577 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2660918..2661577 Methylovorus glucosetrophus SIP3-4 8173765 YP_003052293.1 CDS Msip34_2529 NC_012969.1 2661606 2662145 D KEGG: mfa:Mfla_2486 G/U mismatch-specific uracil-DNA glycosylase; G/U mismatch-specific uracil-DNA glycosylase 2661606..2662145 Methylovorus glucosetrophus SIP3-4 8173924 YP_003052294.1 CDS gatB NC_012969.1 2662198 2663628 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(2662198..2663628) Methylovorus glucosetrophus SIP3-4 8174544 YP_003052295.1 CDS gatA NC_012969.1 2663631 2665094 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(2663631..2665094) Methylovorus glucosetrophus SIP3-4 8174545 YP_003052296.1 CDS gatC NC_012969.1 2665119 2665406 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(2665119..2665406) Methylovorus glucosetrophus SIP3-4 8174546 YP_003052297.1 CDS Msip34_2533 NC_012969.1 2665608 2666651 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2665608..2666651 Methylovorus glucosetrophus SIP3-4 8174547 YP_003052298.1 CDS Msip34_2534 NC_012969.1 2666780 2667724 D TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: mfa:Mfla_2492 rod shape-determining protein MreC; rod shape-determining protein MreC 2666780..2667724 Methylovorus glucosetrophus SIP3-4 8174548 YP_003052299.1 CDS Msip34_2535 NC_012969.1 2667731 2668207 D TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: mfa:Mfla_2493 rod shape-determining protein MreD; rod shape-determining protein MreD 2667731..2668207 Methylovorus glucosetrophus SIP3-4 8174549 YP_003052300.1 CDS Msip34_2536 NC_012969.1 2668214 2670145 D KEGG: mfa:Mfla_2494 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 2668214..2670145 Methylovorus glucosetrophus SIP3-4 8174550 YP_003052301.1 CDS Msip34_2537 NC_012969.1 2670138 2671232 D TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: mfa:Mfla_2495 rod shape-determining protein RodA; rod shape-determining protein RodA 2670138..2671232 Methylovorus glucosetrophus SIP3-4 8174551 YP_003052302.1 CDS Msip34_2538 NC_012969.1 2671232 2672203 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mfa:Mfla_2496 rare lipoprotein A; rare lipoprotein A 2671232..2672203 Methylovorus glucosetrophus SIP3-4 8174552 YP_003052303.1 CDS Msip34_2539 NC_012969.1 2672222 2673358 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mfa:Mfla_2497 penicillin-binding protein 6; beta-lactamase 2672222..2673358 Methylovorus glucosetrophus SIP3-4 8174553 YP_003052304.1 CDS Msip34_2540 NC_012969.1 2673363 2674235 D PFAM: aminotransferase class IV; KEGG: nmu:Nmul_A1990 aminotransferase, class IV; class IV aminotransferase 2673363..2674235 Methylovorus glucosetrophus SIP3-4 8174554 YP_003052305.1 CDS Msip34_2541 NC_012969.1 2674228 2674494 D PFAM: protein of unknown function DUF493; KEGG: mfa:Mfla_2499 hypothetical protein; hypothetical protein 2674228..2674494 Methylovorus glucosetrophus SIP3-4 8174555 YP_003052306.1 CDS Msip34_2542 NC_012969.1 2674497 2675138 D KEGG: mfa:Mfla_2500 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 2674497..2675138 Methylovorus glucosetrophus SIP3-4 8174556 YP_003052307.1 CDS Msip34_2543 NC_012969.1 2675135 2676115 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2675135..2676115 Methylovorus glucosetrophus SIP3-4 8174557 YP_003052308.1 CDS Msip34_2544 NC_012969.1 2676246 2676782 R KEGG: pna:Pnap_0404 hypothetical protein; hypothetical protein complement(2676246..2676782) Methylovorus glucosetrophus SIP3-4 8174558 YP_003052309.1 CDS Msip34_2545 NC_012969.1 2677170 2677286 D hypothetical protein 2677170..2677286 Methylovorus glucosetrophus SIP3-4 8174559 YP_003052310.1 CDS Msip34_2546 NC_012969.1 2677311 2678774 R PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator; GntR family transcriptional regulator complement(2677311..2678774) Methylovorus glucosetrophus SIP3-4 8174560 YP_003052311.1 CDS Msip34_2547 NC_012969.1 2678835 2678963 D hypothetical protein 2678835..2678963 Methylovorus glucosetrophus SIP3-4 8174561 YP_003052312.1 CDS Msip34_2548 NC_012969.1 2679047 2679187 D hypothetical protein 2679047..2679187 Methylovorus glucosetrophus SIP3-4 8174562 YP_003052313.1 CDS Msip34_2549 NC_012969.1 2679283 2681154 D KEGG: mfa:Mfla_2314 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase 2679283..2681154 Methylovorus glucosetrophus SIP3-4 8174563 YP_003052314.1 CDS Msip34_2550 NC_012969.1 2681265 2681498 R KEGG: mfa:Mfla_2659 hypothetical protein; hypothetical protein complement(2681265..2681498) Methylovorus glucosetrophus SIP3-4 8174564 YP_003052315.1 CDS Msip34_2551 NC_012969.1 2681774 2682100 D KEGG: hypothetical protein; hypothetical protein 2681774..2682100 Methylovorus glucosetrophus SIP3-4 8174565 YP_003052316.1 CDS Msip34_2552 NC_012969.1 2682178 2682369 D hypothetical protein 2682178..2682369 Methylovorus glucosetrophus SIP3-4 8174566 YP_003052317.1 CDS Msip34_2553 NC_012969.1 2682400 2683710 R PFAM: phosphoribosylglycinamide synthetase; KEGG: aha:AHA_0840 phosphoribosylamine--glycine ligase; phosphoribosylglycinamide synthetase complement(2682400..2683710) Methylovorus glucosetrophus SIP3-4 8174567 YP_003052318.1 CDS Msip34_2554 NC_012969.1 2683716 2684711 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mfa:Mfla_1425 methyltransferase small; methyltransferase small complement(2683716..2684711) Methylovorus glucosetrophus SIP3-4 8174568 YP_003052319.1 CDS Msip34_2555 NC_012969.1 2684916 2686364 D KEGG: mfa:Mfla_1424 hypothetical protein; hypothetical protein 2684916..2686364 Methylovorus glucosetrophus SIP3-4 8174569 YP_003052320.1 CDS Msip34_2556 NC_012969.1 2686465 2686872 D PFAM: copper resistance protein CopC; KEGG: mno:Mnod_6630 copper resistance protein CopC; copper resistance protein CopC 2686465..2686872 Methylovorus glucosetrophus SIP3-4 8174570 YP_003052321.1 CDS Msip34_2557 NC_012969.1 2686876 2687736 D KEGG: mfa:Mfla_1430 copper resistance D; copper resistance D 2686876..2687736 Methylovorus glucosetrophus SIP3-4 8174571 YP_003052322.1 CDS Msip34_2558 NC_012969.1 2687714 2688274 R KEGG: mfa:Mfla_1431 hypothetical protein; hypothetical protein complement(2687714..2688274) Methylovorus glucosetrophus SIP3-4 8174572 YP_003052323.1 CDS Msip34_2559 NC_012969.1 2688315 2688989 R PFAM: cytochrome c class I; KEGG: mfa:Mfla_1432 cytochrome c, class I; class I cytochrome c complement(2688315..2688989) Methylovorus glucosetrophus SIP3-4 8174573 YP_003052324.1 CDS Msip34_2560 NC_012969.1 2688986 2689630 R PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: mfa:Mfla_1433 cytochrome c oxidase, mono-heme subunit/FixO; cytochrome C oxidase mono-heme subunit/FixO complement(2688986..2689630) Methylovorus glucosetrophus SIP3-4 8174574 YP_003052325.1 CDS Msip34_2561 NC_012969.1 2689627 2691174 R PFAM: cytochrome c oxidase subunit I; KEGG: mfa:Mfla_1434 cytochrome c oxidase, subunit I; cytochrome-c oxidase complement(2689627..2691174) Methylovorus glucosetrophus SIP3-4 8174575 YP_003052326.1 CDS Msip34_2562 NC_012969.1 2691171 2691419 R TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; KEGG: mfa:Mfla_1435 hypothetical protein; cbb3-type cytochrome oxidase maturation protein complement(2691171..2691419) Methylovorus glucosetrophus SIP3-4 8174576 YP_003052327.1 CDS Msip34_2563 NC_012969.1 2691869 2694022 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_1419 alpha amylase, catalytic region; alpha amylase 2691869..2694022 Methylovorus glucosetrophus SIP3-4 8174577 YP_003052328.1 CDS Msip34_2564 NC_012969.1 2694023 2697622 D KEGG: mfa:Mfla_1418 trehalose synthase-like protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain; trehalose synthase 2694023..2697622 Methylovorus glucosetrophus SIP3-4 8174578 YP_003052329.1 CDS Msip34_2565 NC_012969.1 2697594 2699549 D KEGG: mfa:Mfla_1417 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 2697594..2699549 Methylovorus glucosetrophus SIP3-4 8174579 YP_003052330.1 CDS Msip34_2566 NC_012969.1 2699546 2702380 D KEGG: mfa:Mfla_1416 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 2699546..2702380 Methylovorus glucosetrophus SIP3-4 8174580 YP_003052331.1 CDS Msip34_2567 NC_012969.1 2702345 2702464 R hypothetical protein complement(2702345..2702464) Methylovorus glucosetrophus SIP3-4 8174581 YP_003052332.1 CDS Msip34_2568 NC_012969.1 2702702 2704144 D KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 2702702..2704144 Methylovorus glucosetrophus SIP3-4 8174582 YP_003052333.1 CDS Msip34_2569 NC_012969.1 2704141 2705142 D KEGG: rso:RS05792 hypothetical protein; hypothetical protein 2704141..2705142 Methylovorus glucosetrophus SIP3-4 8174583 YP_003052334.1 CDS Msip34_2570 NC_012969.1 2705321 2705779 D KEGG: GE14936 gene product from transcript GE14936-RA; hypothetical protein 2705321..2705779 Methylovorus glucosetrophus SIP3-4 8174584 YP_003052335.1 CDS Msip34_2571 NC_012969.1 2705890 2706465 R PFAM: Hemerythrin HHE cation binding domain protein; KEGG: har:HEAR3280 hypothetical protein; Hemerythrin HHE cation-binding domain-containing protein complement(2705890..2706465) Methylovorus glucosetrophus SIP3-4 8174585 YP_003052336.1 CDS Msip34_2572 NC_012969.1 2706607 2706729 R hypothetical protein complement(2706607..2706729) Methylovorus glucosetrophus SIP3-4 8174586 YP_003052337.1 CDS Msip34_2573 NC_012969.1 2707072 2707953 D KEGG: reu:Reut_B5082 Ku; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 2707072..2707953 Methylovorus glucosetrophus SIP3-4 8174587 YP_003052338.1 CDS Msip34_2574 NC_012969.1 2707963 2710575 D TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; mRNA capping enzyme; KEGG: psb:Psyr_3245 ATP-dependent DNA ligase; DNA ligase D 2707963..2710575 Methylovorus glucosetrophus SIP3-4 8174588 YP_003052339.1 CDS Msip34_2575 NC_012969.1 2710612 2710974 R KEGG: bxe:Bxe_C0169 hypothetical protein; hypothetical protein complement(2710612..2710974) Methylovorus glucosetrophus SIP3-4 8174589 YP_003052340.1 CDS Msip34_2576 NC_012969.1 2711219 2712022 R KEGG: bxe:Bxe_B1651 hypothetical protein; hypothetical protein complement(2711219..2712022) Methylovorus glucosetrophus SIP3-4 8174590 YP_003052341.1 CDS Msip34_2577 NC_012969.1 2712304 2712600 R hypothetical protein complement(2712304..2712600) Methylovorus glucosetrophus SIP3-4 8174591 YP_003052342.1 CDS Msip34_2578 NC_012969.1 2712890 2713546 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mfa:Mfla_2504 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2712890..2713546 Methylovorus glucosetrophus SIP3-4 8174592 YP_003052343.1 CDS Msip34_2579 NC_012969.1 2713659 2714072 D PFAM: histidine triad (HIT) protein; KEGG: mfa:Mfla_2506 histidine triad (HIT) protein; histidine triad (HIT) protein 2713659..2714072 Methylovorus glucosetrophus SIP3-4 8174593 YP_003052344.1 CDS Msip34_2580 NC_012969.1 2714103 2714435 R KEGG: rpi:Rpic_0185 putative ferredoxin 2Fe-2S protein; putative ferredoxin 2Fe-2S protein complement(2714103..2714435) Methylovorus glucosetrophus SIP3-4 8174594 YP_003052345.1 CDS Msip34_2581 NC_012969.1 2714473 2715417 R TIGRFAM: TonB family protein; KEGG: mfa:Mfla_2507 TonB-like protein; TonB family protein complement(2714473..2715417) Methylovorus glucosetrophus SIP3-4 8174595 YP_003052346.1 CDS Msip34_2582 NC_012969.1 2715426 2716799 R TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mfa:Mfla_2508 UDP-N-acetylmuramate; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(2715426..2716799) Methylovorus glucosetrophus SIP3-4 8174596 YP_003052347.1 CDS Msip34_2583 NC_012969.1 2716985 2718253 D PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: gme:Gmet_2417 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2716985..2718253 Methylovorus glucosetrophus SIP3-4 8174597 YP_003052348.1 CDS metH NC_012969.1 2718341 2722210 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(2718341..2722210) Methylovorus glucosetrophus SIP3-4 8174598 YP_003052349.1 CDS Msip34_2585 NC_012969.1 2722459 2723502 R PFAM: protein of unknown function DUF125 transmembrane; KEGG: tbd:Tbd_0236 hypothetical protein; hypothetical protein complement(2722459..2723502) Methylovorus glucosetrophus SIP3-4 8174599 YP_003052350.1 CDS Msip34_2586 NC_012969.1 2723516 2725006 R KEGG: mfa:Mfla_2510 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(2723516..2725006) Methylovorus glucosetrophus SIP3-4 8174600 YP_003052351.1 CDS Msip34_2587 NC_012969.1 2725016 2725282 R PFAM: protein of unknown function DUF526; KEGG: mfa:Mfla_2511 hypothetical protein; hypothetical protein complement(2725016..2725282) Methylovorus glucosetrophus SIP3-4 8174601 YP_003052352.1 CDS Msip34_2588 NC_012969.1 2725525 2726349 D KEGG: mfa:Mfla_2512 hypothetical protein; hypothetical protein 2725525..2726349 Methylovorus glucosetrophus SIP3-4 8174602 YP_003052353.1 CDS Msip34_2589 NC_012969.1 2726447 2726785 D PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_2513 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2726447..2726785 Methylovorus glucosetrophus SIP3-4 8174603 YP_003052354.1 CDS Msip34_2590 NC_012969.1 2726798 2728237 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mfa:Mfla_2514 ammonium transporter; ammonium transporter 2726798..2728237 Methylovorus glucosetrophus SIP3-4 8174604 YP_003052355.1 CDS Msip34_2591 NC_012969.1 2728656 2729933 D TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: mfa:Mfla_2516 glutamate--cysteine ligase GshA; glutamate/cysteine ligase 2728656..2729933 Methylovorus glucosetrophus SIP3-4 8174605 YP_003052356.1 CDS Msip34_2592 NC_012969.1 2729935 2730867 D KEGG: mfa:Mfla_2517 glutathione synthase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein; glutathione synthetase 2729935..2730867 Methylovorus glucosetrophus SIP3-4 8174606 YP_003052357.1 CDS Msip34_2593 NC_012969.1 2730909 2734598 R PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: mfa:Mfla_2518 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; Pyrrolo-quinoline quinone complement(2730909..2734598) Methylovorus glucosetrophus SIP3-4 8174607 YP_003052358.1 CDS Msip34_2594 NC_012969.1 2734608 2735231 R KEGG: mfa:Mfla_2519 hypothetical protein; hypothetical protein complement(2734608..2735231) Methylovorus glucosetrophus SIP3-4 8174608 YP_003052359.1 CDS Msip34_2595 NC_012969.1 2735228 2736346 R KEGG: mfa:Mfla_2520 hypothetical protein; hypothetical protein complement(2735228..2736346) Methylovorus glucosetrophus SIP3-4 8174609 YP_003052360.1 CDS Msip34_2596 NC_012969.1 2736343 2736810 R KEGG: mfa:Mfla_2521 hypothetical protein; hypothetical protein complement(2736343..2736810) Methylovorus glucosetrophus SIP3-4 8174610 YP_003052361.1 CDS Msip34_2597 NC_012969.1 2736804 2737370 R KEGG: mfa:Mfla_2522 methylation; methylation protein complement(2736804..2737370) Methylovorus glucosetrophus SIP3-4 8174611 YP_003052362.1 CDS Msip34_2598 NC_012969.1 2737370 2737810 R KEGG: mms:mma_3360 type IV pilus biogenesis protein PilE; type IV pilus biogenesis protein PilE complement(2737370..2737810) Methylovorus glucosetrophus SIP3-4 8174612 YP_003052363.1 CDS Msip34_2599 NC_012969.1 2737980 2738138 D hypothetical protein 2737980..2738138 Methylovorus glucosetrophus SIP3-4 8174613 YP_003052364.1 CDS Msip34_2600 NC_012969.1 2738201 2739448 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mfa:Mfla_2443 diaminopimelate decarboxylase; diaminopimelate decarboxylase 2738201..2739448 Methylovorus glucosetrophus SIP3-4 8174614 YP_003052365.1 CDS Msip34_2601 NC_012969.1 2739542 2740399 R TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: mfa:Mfla_2434 formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase complement(2739542..2740399) Methylovorus glucosetrophus SIP3-4 8174615 YP_003052366.1 CDS Msip34_2602 NC_012969.1 2740568 2741101 D KEGG: mfa:Mfla_2433 hypothetical protein; hypothetical protein 2740568..2741101 Methylovorus glucosetrophus SIP3-4 8174616 YP_003052367.1 CDS Msip34_2603 NC_012969.1 2741098 2742015 D PFAM: cobalamin biosynthesis protein CbiB; KEGG: mfa:Mfla_2432 adenosylcobinamide-phosphate synthase; cobalamin biosynthesis protein CbiB 2741098..2742015 Methylovorus glucosetrophus SIP3-4 8174617 YP_003052368.1 CDS Msip34_2604 NC_012969.1 2742064 2742990 D KEGG: mfa:Mfla_2431 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 2742064..2742990 Methylovorus glucosetrophus SIP3-4 8174618 YP_003052369.1 CDS Msip34_2605 NC_012969.1 2743064 2743444 R PFAM: DoxX family protein; KEGG: mfa:Mfla_2430 DoxX; DoxX family protein complement(2743064..2743444) Methylovorus glucosetrophus SIP3-4 8174619 YP_003052370.1 CDS Msip34_2606 NC_012969.1 2743533 2743715 D hypothetical protein 2743533..2743715 Methylovorus glucosetrophus SIP3-4 8174620 YP_003052371.1 CDS Msip34_2607 NC_012969.1 2743702 2744145 D PFAM: GCN5-related N-acetyltransferase; KEGG: tbd:Tbd_1275 hypothetical protein; N-acetyltransferase GCN5 2743702..2744145 Methylovorus glucosetrophus SIP3-4 8174621 YP_003052372.1 CDS Msip34_2608 NC_012969.1 2744249 2744800 D TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2524 putative formaldehyde-activating enzyme; formaldehyde-activating protein 2744249..2744800 Methylovorus glucosetrophus SIP3-4 8174622 YP_003052373.1 CDS Msip34_2609 NC_012969.1 2744953 2745318 R KEGG: mfa:Mfla_1297 hypothetical protein; hypothetical protein complement(2744953..2745318) Methylovorus glucosetrophus SIP3-4 8174623 YP_003052374.1 CDS Msip34_2610 NC_012969.1 2745442 2747058 R TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: mfa:Mfla_1992 sulphate transporter; sulfate transporter complement(2745442..2747058) Methylovorus glucosetrophus SIP3-4 8174626 YP_003052375.1 CDS Msip34_2611 NC_012969.1 2747184 2748305 R KEGG: mfa:Mfla_2525 A/G-specific DNA-adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(2747184..2748305) Methylovorus glucosetrophus SIP3-4 8174627 YP_003052376.1 CDS Msip34_2612 NC_012969.1 2748442 2751132 R PFAM: AsmA family protein; KEGG: mfa:Mfla_2526 AsmA; AsmA family protein complement(2748442..2751132) Methylovorus glucosetrophus SIP3-4 8174628 YP_003052377.1 CDS Msip34_2613 NC_012969.1 2751227 2751862 R PFAM: Exopolysaccharide synthesis ExoD; KEGG: sme:SMc00353 putative transmembrane protein; Exopolysaccharide synthesis ExoD complement(2751227..2751862) Methylovorus glucosetrophus SIP3-4 8174629 YP_003052378.1 CDS Msip34_2614 NC_012969.1 2751866 2752684 R KEGG: mfa:Mfla_2527 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase complement(2751866..2752684) Methylovorus glucosetrophus SIP3-4 8174630 YP_003052379.1 CDS Msip34_2615 NC_012969.1 2752803 2753198 R PFAM: protein of unknown function DUF937; KEGG: mfa:Mfla_2528 hypothetical protein; hypothetical protein complement(2752803..2753198) Methylovorus glucosetrophus SIP3-4 8174631 YP_003052380.1 CDS Msip34_2616 NC_012969.1 2753285 2754652 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_2529 pseudouridine synthase, Rsu; RNA-binding S4 domain-containing protein complement(2753285..2754652) Methylovorus glucosetrophus SIP3-4 8174632 YP_003052381.1 CDS Msip34_2617 NC_012969.1 2754765 2756648 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(2754765..2756648) Methylovorus glucosetrophus SIP3-4 8174633 YP_003052382.1 CDS Msip34_2618 NC_012969.1 2756965 2757612 R KEGG: maq:Maqu_0293 hypothetical protein; hypothetical protein complement(2756965..2757612) Methylovorus glucosetrophus SIP3-4 8174634 YP_003052383.1 CDS Msip34_2619 NC_012969.1 2757609 2758433 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; KEGG: hch:HCH_06616 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2757609..2758433) Methylovorus glucosetrophus SIP3-4 8174635 YP_003052384.1 CDS Msip34_2620 NC_012969.1 2758430 2759110 R KEGG: hch:HCH_06615 hypothetical protein; putative TenA family transcriptional activator complement(2758430..2759110) Methylovorus glucosetrophus SIP3-4 8174636 YP_003052385.1 CDS Msip34_2621 NC_012969.1 2759097 2760623 R PFAM: AMP-dependent synthetase and ligase; KEGG: psa:PST_0910 long-chain-fatty-acid--CoA ligase, putative; AMP-dependent synthetase and ligase complement(2759097..2760623) Methylovorus glucosetrophus SIP3-4 8174637 YP_003052386.1 CDS Msip34_2622 NC_012969.1 2760632 2761273 R KEGG: psa:PST_0911 hypothetical protein; hypothetical protein complement(2760632..2761273) Methylovorus glucosetrophus SIP3-4 8174638 YP_003052387.1 CDS Msip34_2623 NC_012969.1 2761500 2762039 R KEGG: mca:MCA3097 hypothetical protein; hypothetical protein complement(2761500..2762039) Methylovorus glucosetrophus SIP3-4 8174639 YP_003052388.1 CDS Msip34_2624 NC_012969.1 2762039 2763034 R KEGG: mca:MCA3098 hypothetical protein; hypothetical protein complement(2762039..2763034) Methylovorus glucosetrophus SIP3-4 8174640 YP_003052389.1 CDS Msip34_2625 NC_012969.1 2763143 2764822 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mca:MCA3099 sensor histidine kinase; histidine kinase 2763143..2764822 Methylovorus glucosetrophus SIP3-4 8174641 YP_003052390.1 CDS Msip34_2626 NC_012969.1 2764822 2766195 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: glo:Glov_3076 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family two component sigma54 specific transcriptional regulator 2764822..2766195 Methylovorus glucosetrophus SIP3-4 8174642 YP_003052391.1 CDS Msip34_2627 NC_012969.1 2766291 2766953 D KEGG: mfa:Mfla_2531 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: ribosomal RNA adenine methylase transferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2766291..2766953 Methylovorus glucosetrophus SIP3-4 8174643 YP_003052392.1 CDS Msip34_2628 NC_012969.1 2766962 2768323 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_2534 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein 2766962..2768323 Methylovorus glucosetrophus SIP3-4 8174644 YP_003052393.1 CDS Msip34_2629 NC_012969.1 2768320 2768880 D PFAM: isochorismatase hydrolase; KEGG: mfa:Mfla_2535 isochorismatase hydrolase; isochorismatase hydrolase 2768320..2768880 Methylovorus glucosetrophus SIP3-4 8174645 YP_003052394.1 CDS Msip34_2630 NC_012969.1 2768887 2769492 D KEGG: tbd:Tbd_1936 hypothetical protein; hypothetical protein 2768887..2769492 Methylovorus glucosetrophus SIP3-4 8174646 YP_003052395.1 CDS Msip34_2631 NC_012969.1 2769560 2770039 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: mfa:Mfla_0310 putative signal peptide protein; cupin complement(2769560..2770039) Methylovorus glucosetrophus SIP3-4 8174647 YP_003052396.1 CDS Msip34_2632 NC_012969.1 2770239 2770976 D KEGG: mfa:Mfla_0308 hypothetical protein; hypothetical protein 2770239..2770976 Methylovorus glucosetrophus SIP3-4 8174648 YP_003052397.1 CDS Msip34_2633 NC_012969.1 2770976 2771530 D PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0309 TetR family transcriptional regulator; TetR family transcriptional regulator 2770976..2771530 Methylovorus glucosetrophus SIP3-4 8174649 YP_003052398.1 CDS Msip34_2634 NC_012969.1 2771586 2772890 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mfa:Mfla_2536 3-deoxy-D-manno-octulosonic-acid transferase-like protein; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(2771586..2772890) Methylovorus glucosetrophus SIP3-4 8174650 YP_003052399.1 CDS Msip34_2635 NC_012969.1 2773259 2775403 D KEGG: mfa:Mfla_2541 ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ribonucleoside-diphosphate reductase 2773259..2775403 Methylovorus glucosetrophus SIP3-4 8174651 YP_003052400.1 CDS Msip34_2636 NC_012969.1 2775473 2776192 D KEGG: mfa:Mfla_2542 hypothetical protein; hypothetical protein 2775473..2776192 Methylovorus glucosetrophus SIP3-4 8174652 YP_003052401.1 CDS Msip34_2637 NC_012969.1 2776346 2777341 D PFAM: Patatin; KEGG: hiq:CGSHiGG_03920 patatin; patatin 2776346..2777341 Methylovorus glucosetrophus SIP3-4 8174653 YP_003052402.1 CDS Msip34_2638 NC_012969.1 2777341 2778747 D KEGG: vei:Veis_4659 hypothetical protein; hypothetical protein 2777341..2778747 Methylovorus glucosetrophus SIP3-4 8174654 YP_003052403.1 CDS Msip34_2639 NC_012969.1 2778812 2781181 R KEGG: msl:Msil_2450 hypothetical protein; hypothetical protein complement(2778812..2781181) Methylovorus glucosetrophus SIP3-4 8174655 YP_003052404.1 CDS Msip34_2640 NC_012969.1 2781191 2781946 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpt:Rpal_4641 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2781191..2781946) Methylovorus glucosetrophus SIP3-4 8174656 YP_003052405.1 CDS Msip34_2641 NC_012969.1 2781950 2782960 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bav:BAV1990 ABC transporter, substrate-binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein complement(2781950..2782960) Methylovorus glucosetrophus SIP3-4 8174657 YP_003052406.1 CDS Msip34_2642 NC_012969.1 2782990 2783820 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce1865 ABC transporter ATP-binding protein; ABC transporter-like protein complement(2782990..2783820) Methylovorus glucosetrophus SIP3-4 8174658 YP_003052407.1 CDS Msip34_2643 NC_012969.1 2783990 2784742 D PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pfs:PFLU2240 putative regulatory protein; GntR family transcriptional regulator 2783990..2784742 Methylovorus glucosetrophus SIP3-4 8174659 YP_003052408.1 CDS Msip34_2644 NC_012969.1 2784803 2785627 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xcv:XCV2346 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2784803..2785627) Methylovorus glucosetrophus SIP3-4 8174660 YP_003052409.1 CDS Msip34_2645 NC_012969.1 2785733 2786266 D TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: she:Shewmr4_3500 alkylhydroperoxidase; peroxidase-like protein 2785733..2786266 Methylovorus glucosetrophus SIP3-4 8174661 YP_003052410.1 CDS Msip34_2646 NC_012969.1 2786336 2787106 D PFAM: peptidase S15; KEGG: rhi:NGR_b14550 hypothetical protein; peptidase S15 2786336..2787106 Methylovorus glucosetrophus SIP3-4 8174662 YP_003052411.1 CDS Msip34_2647 NC_012969.1 2787156 2788037 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein; hypothetical protein complement(2787156..2788037) Methylovorus glucosetrophus SIP3-4 8174663 YP_003052412.1 CDS Msip34_2648 NC_012969.1 2788139 2788906 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 AraC family transcriptional regulator; AraC family transcriptional regulator 2788139..2788906 Methylovorus glucosetrophus SIP3-4 8174664 YP_003052413.1 CDS Msip34_2649 NC_012969.1 2788938 2789867 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4488 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2788938..2789867) Methylovorus glucosetrophus SIP3-4 8174665 YP_003052414.1 CDS Msip34_2650 NC_012969.1 2790002 2790898 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pen:PSEEN1324 LysR family transcriptional regulator; LysR family transcriptional regulator 2790002..2790898 Methylovorus glucosetrophus SIP3-4 8174666 YP_003052415.1 CDS Msip34_2651 NC_012969.1 2791049 2792041 R PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_0582 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2791049..2792041) Methylovorus glucosetrophus SIP3-4 8174667 YP_003052416.1 CDS Msip34_2652 NC_012969.1 2792351 2792797 D KEGG: kpn:KPN_00005 hypothetical protein; hypothetical protein 2792351..2792797 Methylovorus glucosetrophus SIP3-4 8174668 YP_003052417.1 CDS Msip34_2653 NC_012969.1 2792960 2793565 D PFAM: protein of unknown function DUF1294; Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: neu:NE0717 cold shock DNA-binding domain-containing protein; cold-shock DNA-binding domain-containing protein 2792960..2793565 Methylovorus glucosetrophus SIP3-4 8174669 YP_003052418.1 CDS Msip34_2654 NC_012969.1 2793911 2794228 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: net:Neut_0492 transport-associated; transporter 2793911..2794228 Methylovorus glucosetrophus SIP3-4 8174670 YP_003052419.1 CDS Msip34_2655 NC_012969.1 2794259 2794450 D hypothetical protein 2794259..2794450 Methylovorus glucosetrophus SIP3-4 8174671 YP_003052420.1 CDS Msip34_2656 NC_012969.1 2794481 2794801 D PFAM: protein of unknown function DUF883 ElaB; KEGG: azo:azo3667 hypothetical protein; hypothetical protein 2794481..2794801 Methylovorus glucosetrophus SIP3-4 8174672 YP_003052421.1 CDS Msip34_2657 NC_012969.1 2794805 2795197 D KEGG: pne:Pnec_0970 putative transmembrane protein; hypothetical protein 2794805..2795197 Methylovorus glucosetrophus SIP3-4 8174673 YP_003052422.1 CDS Msip34_2658 NC_012969.1 2795206 2795550 D hypothetical protein 2795206..2795550 Methylovorus glucosetrophus SIP3-4 8174674 YP_003052423.1 CDS Msip34_2659 NC_012969.1 2795559 2795768 D hypothetical protein 2795559..2795768 Methylovorus glucosetrophus SIP3-4 8174675 YP_003052424.1 CDS Msip34_2660 NC_012969.1 2795800 2796507 R KEGG: pna:Pnap_1316 cyclic nucleotide-binding domain-containing protein; putative Crp/Fnr family transcriptional regulator complement(2795800..2796507) Methylovorus glucosetrophus SIP3-4 8174676 YP_003052425.1 CDS Msip34_2661 NC_012969.1 2796693 2798000 R KEGG: dar:Daro_2048 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase complement(2796693..2798000) Methylovorus glucosetrophus SIP3-4 8174677 YP_003052426.1 CDS Msip34_2662 NC_012969.1 2798144 2798872 R SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bxe:Bxe_C0542 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(2798144..2798872) Methylovorus glucosetrophus SIP3-4 8174678 YP_003052427.1 CDS Msip34_2663 NC_012969.1 2799152 2799280 D KEGG: spc:Sputcn32_3380 hypothetical protein; hypothetical protein 2799152..2799280 Methylovorus glucosetrophus SIP3-4 8174679 YP_003052428.1 CDS Msip34_2664 NC_012969.1 2799309 2808032 D PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: tbd:Tbd_1304 cyclic beta 1-2 glucan synthetase; glycosyltransferase 2799309..2808032 Methylovorus glucosetrophus SIP3-4 8174680 YP_003052429.1 CDS Msip34_2665 NC_012969.1 2808117 2808587 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_0312 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2808117..2808587) Methylovorus glucosetrophus SIP3-4 8174681 YP_003052430.1 CDS Msip34_2666 NC_012969.1 2808623 2809354 D PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: cvi:CV_2466 iron-chelator utilization protein; Siderophore-interacting protein 2808623..2809354 Methylovorus glucosetrophus SIP3-4 8174682 YP_003052431.1 CDS Msip34_2667 NC_012969.1 2809469 2811214 R KEGG: bra:BRADO1824 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer complement(2809469..2811214) Methylovorus glucosetrophus SIP3-4 8174683 YP_003052432.1 CDS Msip34_2668 NC_012969.1 2811452 2812102 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B1426 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(2811452..2812102) Methylovorus glucosetrophus SIP3-4 8174684 YP_003052433.1 CDS Msip34_2669 NC_012969.1 2812271 2813737 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mms:mma_1232 GntR family transcriptional regulator; aminotransferase domain-containing GntR family transcriptional regulator complement(2812271..2813737) Methylovorus glucosetrophus SIP3-4 8174685 YP_003052434.1 CDS Msip34_2670 NC_012969.1 2813816 2815219 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gur:Gura_3497 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(2813816..2815219) Methylovorus glucosetrophus SIP3-4 8174686 YP_003052435.1 CDS Msip34_2671 NC_012969.1 2815222 2818353 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: cja:CJA_1474 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(2815222..2818353) Methylovorus glucosetrophus SIP3-4 8174687 YP_003052436.1 CDS Msip34_2672 NC_012969.1 2818363 2819535 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xcb:XC_1432 multidrug resistance protein; RND family efflux transporter MFP subunit complement(2818363..2819535) Methylovorus glucosetrophus SIP3-4 8174688 YP_003052437.1 CDS Msip34_2673 NC_012969.1 2819687 2820322 D PFAM: regulatory protein TetR; KEGG: azo:azo0243 TetR family transcriptional regulator; TetR family transcriptional regulator 2819687..2820322 Methylovorus glucosetrophus SIP3-4 8174689 YP_003052438.1 CDS Msip34_2674 NC_012969.1 2820569 2822389 D KEGG: aav:Aave_4730 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 2820569..2822389 Methylovorus glucosetrophus SIP3-4 8174690 YP_003052439.1 CDS Msip34_2675 NC_012969.1 2822486 2823289 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ppw:PputW619_3232 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2822486..2823289 Methylovorus glucosetrophus SIP3-4 8174691 YP_003052440.1 CDS Msip34_2676 NC_012969.1 2823541 2824530 D PFAM: Catalase domain protein; KEGG: mfa:Mfla_2572 catalase-like protein; Catalase domain-containing protein 2823541..2824530 Methylovorus glucosetrophus SIP3-4 8174692 YP_003052441.1 CDS Msip34_2677 NC_012969.1 2824586 2825032 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: psp:PSPPH_3645 MarR family transcriptional regulator; MarR family transcriptional regulator 2824586..2825032 Methylovorus glucosetrophus SIP3-4 8174693 YP_003052442.1 CDS Msip34_2678 NC_012969.1 2825202 2826029 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vha:VIBHAR_06279 hypothetical protein; AraC family transcriptional regulator 2825202..2826029 Methylovorus glucosetrophus SIP3-4 8174694 YP_003052443.1 CDS Msip34_2679 NC_012969.1 2826030 2826974 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sml:Smlt1764 putative LysR-family transcriptional regulator; LysR family transcriptional regulator complement(2826030..2826974) Methylovorus glucosetrophus SIP3-4 8174695 YP_003052444.1 CDS Msip34_2680 NC_012969.1 2827133 2827834 D PFAM: Pirin domain protein; KEGG: cti:RALTA_A2205 putative transcription cofactor, metal binding pirin domain; Pirin domain-containing protein 2827133..2827834 Methylovorus glucosetrophus SIP3-4 8174696 YP_003052445.1 CDS Msip34_2681 NC_012969.1 2827883 2828761 D PFAM: NmrA family protein; KEGG: sse:Ssed_2152 hypothetical protein; NmrA family protein 2827883..2828761 Methylovorus glucosetrophus SIP3-4 8174697 YP_003052446.1 CDS Msip34_2682 NC_012969.1 2828901 2829566 D PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2476 isochorismatase superfamily hydrolase; isochorismatase hydrolase 2828901..2829566 Methylovorus glucosetrophus SIP3-4 8174698 YP_003052447.1 CDS Msip34_2683 NC_012969.1 2829631 2831511 D PFAM: Amidohydrolase 3; KEGG: avn:Avin_42330 metallo-dependent hydrolase; amidohydrolase 2829631..2831511 Methylovorus glucosetrophus SIP3-4 8174699 YP_003052448.1 CDS Msip34_2684 NC_012969.1 2831518 2833158 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: pla:Plav_2384 protein of unknown function DUF894 DitE; hypothetical protein 2831518..2833158 Methylovorus glucosetrophus SIP3-4 8174700 YP_003052449.1 CDS Msip34_2685 NC_012969.1 2833151 2833387 D KEGG: xcv:XCV2194 hypothetical protein; hypothetical protein 2833151..2833387 Methylovorus glucosetrophus SIP3-4 8174701 YP_003052450.1 CDS Msip34_2686 NC_012969.1 2833387 2833617 D KEGG: xcv:XCV2195 hypothetical protein; hypothetical protein 2833387..2833617 Methylovorus glucosetrophus SIP3-4 8174702 YP_003052451.1 CDS Msip34_2687 NC_012969.1 2833642 2834367 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bur:Bcep18194_C6909 peptidase M17, leucyl aminopeptidase-like; peptidase M17 leucyl aminopeptidase domain-containing protein 2833642..2834367 Methylovorus glucosetrophus SIP3-4 8174703 YP_003052452.1 CDS Msip34_2688 NC_012969.1 2834345 2835841 D KEGG: gsu:GSU0801 hypothetical protein; hypothetical protein 2834345..2835841 Methylovorus glucosetrophus SIP3-4 8174704 YP_003052453.1 CDS Msip34_2689 NC_012969.1 2835931 2836320 D KEGG: mfa:Mfla_2178 hypothetical protein; hypothetical protein 2835931..2836320 Methylovorus glucosetrophus SIP3-4 8174705 YP_003052454.1 CDS Msip34_2690 NC_012969.1 2836416 2837321 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eba:ebA1369 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2836416..2837321) Methylovorus glucosetrophus SIP3-4 8174706 YP_003052455.1 CDS Msip34_2691 NC_012969.1 2837453 2837809 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: noc:Noc_1918 transcription elongation factor; GreA/GreB family elongation factor 2837453..2837809 Methylovorus glucosetrophus SIP3-4 8173462 YP_003052456.1 CDS Msip34_2692 NC_012969.1 2837946 2838980 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_0687 ATPase; ATPase 2837946..2838980 Methylovorus glucosetrophus SIP3-4 8173382 YP_003052457.1 CDS Msip34_2693 NC_012969.1 2838985 2839848 D KEGG: mfa:Mfla_0688 hypothetical protein; hypothetical protein 2838985..2839848 Methylovorus glucosetrophus SIP3-4 8173383 YP_003052458.1 CDS Msip34_2694 NC_012969.1 2839845 2840771 D KEGG: mfa:Mfla_0689 MxaA protein, putative; MxaA protein 2839845..2840771 Methylovorus glucosetrophus SIP3-4 8173384 YP_003052459.1 CDS Msip34_2695 NC_012969.1 2840768 2841751 D SMART: von Willebrand factor type A; KEGG: mfa:Mfla_0690 von Willebrand factor, type A; von Willebrand factor type A 2840768..2841751 Methylovorus glucosetrophus SIP3-4 8173385 YP_003052460.1 CDS Msip34_2696 NC_012969.1 2841736 2842272 D KEGG: mfa:Mfla_0691 hypothetical protein; hypothetical protein 2841736..2842272 Methylovorus glucosetrophus SIP3-4 8173386 YP_003052461.1 CDS Msip34_2697 NC_012969.1 2842269 2843255 D KEGG: mfa:Mfla_0692 von Willebrand factor, type A; von Willebrand factor, type A 2842269..2843255 Methylovorus glucosetrophus SIP3-4 8173387 YP_003052462.1 CDS Msip34_2698 NC_012969.1 2843307 2844323 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_3020 zinc-binding alcohol dehydrogenase family protein; zinc-binding alcohol dehydrogenase family protein complement(2843307..2844323) Methylovorus glucosetrophus SIP3-4 8173388 YP_003052463.1 CDS Msip34_2699 NC_012969.1 2844393 2845349 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_14681 putative transcriptional regulator; LysR family transcriptional regulator 2844393..2845349 Methylovorus glucosetrophus SIP3-4 8173389 YP_003052464.1 CDS Msip34_2700 NC_012969.1 2845606 2847060 D PFAM: glycosyl transferase family 39; KEGG: pap:PSPA7_5537 hypothetical protein; glycosyl transferase family protein 2845606..2847060 Methylovorus glucosetrophus SIP3-4 8173390 YP_003052465.1 CDS Msip34_2701 NC_012969.1 2847092 2849260 R KEGG: tgr:Tgr7_0488 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2847092..2849260) Methylovorus glucosetrophus SIP3-4 8173391 YP_003052466.1 CDS Msip34_2702 NC_012969.1 2849289 2850371 R PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: xom:XOO_1366 chemotaxis-specific methylesterase; response regulator receiver modulated CheB methylesterase complement(2849289..2850371) Methylovorus glucosetrophus SIP3-4 8173392 YP_003052467.1 CDS Msip34_2703 NC_012969.1 2850399 2850896 R KEGG: tmz:Tmz1t_1321 CheD; CheD, stimulates methylation of MCP protein complement(2850399..2850896) Methylovorus glucosetrophus SIP3-4 8173393 YP_003052468.1 CDS Msip34_2704 NC_012969.1 2850899 2851708 R KEGG: psb:Psyr_0783 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(2850899..2851708) Methylovorus glucosetrophus SIP3-4 8173394 YP_003052469.1 CDS Msip34_2705 NC_012969.1 2851775 2852326 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: azo:azo0405 positive regulator of CheA protein activity; CheW protein complement(2851775..2852326) Methylovorus glucosetrophus SIP3-4 8173395 YP_003052470.1 CDS Msip34_2706 NC_012969.1 2852336 2854723 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: xac:XAC2866 chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2852336..2854723) Methylovorus glucosetrophus SIP3-4 8173396 YP_003052471.1 CDS Msip34_2707 NC_012969.1 2854846 2855379 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rfr:Rfer_0903 CheW protein; CheW protein complement(2854846..2855379) Methylovorus glucosetrophus SIP3-4 8173397 YP_003052472.1 CDS Msip34_2708 NC_012969.1 2855389 2857560 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: xac:XAC2866 chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2855389..2857560) Methylovorus glucosetrophus SIP3-4 8173398 YP_003052473.1 CDS Msip34_2709 NC_012969.1 2857623 2858309 R KEGG: xca:xccb100_0402 hypothetical protein; hypothetical protein complement(2857623..2858309) Methylovorus glucosetrophus SIP3-4 8173399 YP_003052474.1 CDS Msip34_2710 NC_012969.1 2858311 2858838 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: psb:Psyr_0784 CheW-like protein; CheW protein complement(2858311..2858838) Methylovorus glucosetrophus SIP3-4 8173400 YP_003052475.1 CDS Msip34_2711 NC_012969.1 2858848 2860482 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: sdn:Sden_3297 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2858848..2860482) Methylovorus glucosetrophus SIP3-4 8173401 YP_003052476.1 CDS Msip34_2712 NC_012969.1 2860540 2862720 R PFAM: CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: azo:azo0408 putative chemotaxis protein histidine kinase; CheA signal transduction histidine kinase complement(2860540..2862720) Methylovorus glucosetrophus SIP3-4 8173402 YP_003052477.1 CDS Msip34_2713 NC_012969.1 2862745 2863065 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: asa:ASA_3265 sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(2862745..2863065) Methylovorus glucosetrophus SIP3-4 8173403 YP_003052478.1 CDS Msip34_2714 NC_012969.1 2863104 2863472 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: psp:PSPPH_0807 chemotaxis protein CheY; response regulator receiver protein complement(2863104..2863472) Methylovorus glucosetrophus SIP3-4 8173404 YP_003052479.1 CDS Msip34_2715 NC_012969.1 2863508 2864497 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: aha:AHA_1039 methyl-accepting chemotaxis protein, putative; methyl-accepting chemotaxis sensory transducer complement(2863508..2864497) Methylovorus glucosetrophus SIP3-4 8173405 YP_003052480.1 CDS Msip34_2716 NC_012969.1 2864862 2866241 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1359 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(2864862..2866241) Methylovorus glucosetrophus SIP3-4 8173406 YP_003052481.1 CDS Msip34_2717 NC_012969.1 2866238 2869360 R MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein complement(2866238..2869360) Methylovorus glucosetrophus SIP3-4 8173407 YP_003052482.1 CDS Msip34_2718 NC_012969.1 2869393 2870544 R MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein complement(2869393..2870544) Methylovorus glucosetrophus SIP3-4 8173408 YP_003052483.1 CDS Msip34_2719 NC_012969.1 2870665 2871273 D PFAM: regulatory protein TetR; KEGG: neu:NE1114 TetR family regulatory protein; TetR family transcriptional regulator 2870665..2871273 Methylovorus glucosetrophus SIP3-4 8173409 YP_003052484.1 CDS Msip34_2720 NC_012969.1 2871321 2873366 R KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2871321..2873366) Methylovorus glucosetrophus SIP3-4 8173410 YP_003052485.1 CDS Msip34_2721 NC_012969.1 2873631 2874491 R PFAM: protein of unknown function DUF399; KEGG: acp:A2cp1_3179 protein of unknown function DUF399; hypothetical protein complement(2873631..2874491) Methylovorus glucosetrophus SIP3-4 8173411 YP_003052486.1 CDS Msip34_2722 NC_012969.1 2874681 2874821 D hypothetical protein 2874681..2874821 Methylovorus glucosetrophus SIP3-4 8173412 YP_003052487.1 CDS Msip34_2723 NC_012969.1 2874885 2875097 D hypothetical protein 2874885..2875097 Methylovorus glucosetrophus SIP3-4 8173413 YP_003052488.1 CDS Msip34_2724 NC_012969.1 2875124 2875360 R KEGG: sil:SPO3845 hypothetical protein; hypothetical protein complement(2875124..2875360) Methylovorus glucosetrophus SIP3-4 8173414 YP_003052489.1 CDS Msip34_2725 NC_012969.1 2875443 2876249 R PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bpy:Bphyt_3970 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2875443..2876249) Methylovorus glucosetrophus SIP3-4 8173415 YP_003052490.1 CDS Msip34_2726 NC_012969.1 2876365 2877306 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4475 transcriptional regulator; AraC family transcriptional regulator 2876365..2877306 Methylovorus glucosetrophus SIP3-4 8173416 YP_003052491.1 CDS Msip34_2727 NC_012969.1 2877403 2878374 D KEGG: tgr:Tgr7_1420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2877403..2878374 Methylovorus glucosetrophus SIP3-4 8173417 YP_003052492.1 CDS Msip34_2728 NC_012969.1 2878378 2878914 R PFAM: protein of unknown function DUF45; KEGG: pna:Pnap_3055 hypothetical protein; hypothetical protein complement(2878378..2878914) Methylovorus glucosetrophus SIP3-4 8173418 YP_003052493.1 CDS Msip34_2729 NC_012969.1 2879053 2882505 D KEGG: cps:CPS_1622 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2879053..2882505 Methylovorus glucosetrophus SIP3-4 8173419 YP_003052494.1 CDS Msip34_2730 NC_012969.1 2882577 2882801 D KEGG: mfa:Mfla_1841 hypothetical protein; hypothetical protein 2882577..2882801 Methylovorus glucosetrophus SIP3-4 8173420 YP_003052495.1 CDS Msip34_2731 NC_012969.1 2882836 2883738 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_2592 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2882836..2883738) Methylovorus glucosetrophus SIP3-4 8173421 YP_003052496.1 CDS Msip34_2732 NC_012969.1 2883858 2884616 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR 2883858..2884616 Methylovorus glucosetrophus SIP3-4 8173422 YP_003052497.1 CDS Msip34_2733 NC_012969.1 2884634 2885557 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: har:HEAR1448 hypothetical protein; rhodanese domain-containing protein complement(2884634..2885557) Methylovorus glucosetrophus SIP3-4 8173423 YP_003052498.1 CDS Msip34_2734 NC_012969.1 2885561 2885752 R KEGG: aav:Aave_0393 hypothetical protein; hypothetical protein complement(2885561..2885752) Methylovorus glucosetrophus SIP3-4 8173424 YP_003052499.1 CDS Msip34_2735 NC_012969.1 2885981 2886697 D PFAM: MgtC/SapB transporter; KEGG: mca:MCA0957 MgtC family protein; MgtC/SapB transporter 2885981..2886697 Methylovorus glucosetrophus SIP3-4 8173425 YP_003052500.1 CDS Msip34_2736 NC_012969.1 2886709 2887977 R KEGG: mfa:Mfla_1134 chaperone protein; chaperone protein complement(2886709..2887977) Methylovorus glucosetrophus SIP3-4 8173426 YP_003052501.1 CDS Msip34_2737 NC_012969.1 2888185 2889105 D PFAM: putative exonuclease RdgC; KEGG: mms:mma_1176 recombination associated protein; putative exonuclease RdgC 2888185..2889105 Methylovorus glucosetrophus SIP3-4 8173427 YP_003052502.1 CDS Msip34_2738 NC_012969.1 2889110 2889973 R PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aav:Aave_3990 transglutaminase domain-containing protein; transglutaminase domain-containing protein complement(2889110..2889973) Methylovorus glucosetrophus SIP3-4 8173428 YP_003052503.1 CDS Msip34_2739 NC_012969.1 2890098 2890289 R KEGG: mfa:Mfla_1053 hypothetical protein; hypothetical protein complement(2890098..2890289) Methylovorus glucosetrophus SIP3-4 8173429 YP_003052504.1 CDS Msip34_2740 NC_012969.1 2890536 2892101 D PFAM: protein of unknown function UPF0061; KEGG: mfa:Mfla_1788 hypothetical protein; hypothetical protein 2890536..2892101 Methylovorus glucosetrophus SIP3-4 8173430 YP_003052505.1 CDS Msip34_2741 NC_012969.1 2892221 2892988 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein complement(2892221..2892988) Methylovorus glucosetrophus SIP3-4 8173431 YP_003052506.1 CDS Msip34_2742 NC_012969.1 2893237 2894553 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: mfa:Mfla_2502 hypothetical protein; hypothetical protein 2893237..2894553 Methylovorus glucosetrophus SIP3-4 8173432 YP_003052507.1 CDS Msip34_2743 NC_012969.1 2894661 2894864 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mfa:Mfla_2140 cold-shock DNA-binding protein family protein; cold-shock DNA-binding domain-containing protein complement(2894661..2894864) Methylovorus glucosetrophus SIP3-4 8173433 YP_003052508.1 CDS Msip34_2744 NC_012969.1 2895034 2895291 R TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: eba:ebA1871 translation initiation factor IF-1; translation initiation factor IF-1 complement(2895034..2895291) Methylovorus glucosetrophus SIP3-4 8173434 YP_003052509.1 CDS Msip34_2745 NC_012969.1 2895624 2896019 D hypothetical protein 2895624..2896019 Methylovorus glucosetrophus SIP3-4 8173435 YP_003052510.1 CDS Msip34_2746 NC_012969.1 2896184 2896444 D hypothetical protein 2896184..2896444 Methylovorus glucosetrophus SIP3-4 8173436 YP_003052511.1 CDS Msip34_2747 NC_012969.1 2896900 2897715 D PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_2370 AraC family transcriptional regulator; AraC family transcriptional regulator 2896900..2897715 Methylovorus glucosetrophus SIP3-4 8173437 YP_003052512.1 CDS Msip34_2748 NC_012969.1 2897712 2898881 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_C1141 RND efflux system membrane fusion protein; RND family efflux transporter MFP subunit complement(2897712..2898881) Methylovorus glucosetrophus SIP3-4 8173438 YP_003052513.1 CDS Msip34_2749 NC_012969.1 2898871 2902074 R PFAM: acriflavin resistance protein; KEGG: rpb:RPB_3609 acriflavin resistance protein; acriflavin resistance protein complement(2898871..2902074) Methylovorus glucosetrophus SIP3-4 8173439 YP_003052514.1 CDS Msip34_2750 NC_012969.1 2902285 2903304 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mpt:Mpe_A3396 trypsin-like serine protease; peptidase S1 and S6 chymotrypsin/Hap complement(2902285..2903304) Methylovorus glucosetrophus SIP3-4 8173440 YP_003052515.1 CDS Msip34_2751 NC_012969.1 2903499 2907098 R PFAM: protein of unknown function DUF748; KEGG: mfa:Mfla_1356 hypothetical protein; hypothetical protein complement(2903499..2907098) Methylovorus glucosetrophus SIP3-4 8173441 YP_003052516.1 CDS Msip34_2752 NC_012969.1 2907266 2907763 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pfs:PFLU1042 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 2907266..2907763 Methylovorus glucosetrophus SIP3-4 8173442 YP_003052517.1 CDS Msip34_2753 NC_012969.1 2907760 2908743 D PFAM: FecR protein; KEGG: avn:Avin_17700 anti-sigma factor, FecR family; anti-FecI sigma factor FecR 2907760..2908743 Methylovorus glucosetrophus SIP3-4 8173443 YP_003052518.1 CDS Msip34_2754 NC_012969.1 2908839 2911217 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pen:PSEEN0276 TonB-dependent receptor; TonB-dependent siderophore receptor 2908839..2911217 Methylovorus glucosetrophus SIP3-4 8173444 YP_003052519.1 CDS Msip34_2755 NC_012969.1 2911595 2911780 R hypothetical protein complement(2911595..2911780) Methylovorus glucosetrophus SIP3-4 8173445 YP_003052520.1 CDS Msip34_2756 NC_012969.1 2911878 2912621 D PFAM: dienelactone hydrolase; KEGG: mfa:Mfla_2602 carboxymethylenebutenolidase; dienelactone hydrolase 2911878..2912621 Methylovorus glucosetrophus SIP3-4 8173446 YP_003052521.1 CDS Msip34_2757 NC_012969.1 2913037 2913309 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_0016 nucleoid protein HU beta subunit; histone family protein DNA-binding protein 2913037..2913309 Methylovorus glucosetrophus SIP3-4 8173447 YP_003052522.1 CDS Msip34_2758 NC_012969.1 2913391 2913675 R KEGG: mfa:Mfla_2670 hypothetical protein; hypothetical protein complement(2913391..2913675) Methylovorus glucosetrophus SIP3-4 8173448 YP_003052523.1 CDS Msip34_2759 NC_012969.1 2913913 2913984 D TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 2913913..2913984 Methylovorus glucosetrophus SIP3-4 8173449 YP_003052524.1 CDS Msip34_2760 NC_012969.1 2914081 2915772 R PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(2914081..2915772) Methylovorus glucosetrophus SIP3-4 8173450 YP_003052525.1 CDS Msip34_2761 NC_012969.1 2916087 2916926 R KEGG: mfa:Mfla_0730 hypothetical protein; hypothetical protein complement(2916087..2916926) Methylovorus glucosetrophus SIP3-4 8173451 YP_003052526.1 CDS Msip34_2762 NC_012969.1 2917364 2918266 D PFAM: PfkB domain protein; KEGG: mfa:Mfla_2609 PfkB; PfkB domain-containing protein 2917364..2918266 Methylovorus glucosetrophus SIP3-4 8173452 YP_003052527.1 CDS Msip34_2763 NC_012969.1 2918263 2920470 D KEGG: mfa:Mfla_2610 sucrose-phosphate synthase, glycosyltransferase region; TIGRFAM: sucrose-phosphate synthase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; glycosyl transferase group 1; Haloacid dehalogenase domain protein hydrolase type 3; sucrose-phosphate synthase 2918263..2920470 Methylovorus glucosetrophus SIP3-4 8173453 YP_003052528.1 CDS Msip34_2764 NC_012969.1 2920463 2922415 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_2611 alpha amylase, catalytic region; alpha amylase 2920463..2922415 Methylovorus glucosetrophus SIP3-4 8173454 YP_003052529.1 CDS Msip34_2765 NC_012969.1 2922491 2923387 D PFAM: MscS Mechanosensitive ion channel; KEGG: tbd:Tbd_0499 mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2922491..2923387 Methylovorus glucosetrophus SIP3-4 8173455 YP_003052530.1 CDS Msip34_2766 NC_012969.1 2923473 2923652 R hypothetical protein complement(2923473..2923652) Methylovorus glucosetrophus SIP3-4 8173456 YP_003052531.1 CDS Msip34_2767 NC_012969.1 2923866 2925104 R PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2622 major facilitator transporter; major facilitator superfamily protein complement(2923866..2925104) Methylovorus glucosetrophus SIP3-4 8173457 YP_003052532.1 CDS Msip34_2768 NC_012969.1 2925272 2927620 D KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2925272..2927620 Methylovorus glucosetrophus SIP3-4 8173458 YP_003052533.1 CDS Msip34_2769 NC_012969.1 2927661 2928038 R hypothetical protein complement(2927661..2928038) Methylovorus glucosetrophus SIP3-4 8173459 YP_003052534.1 CDS Msip34_2770 NC_012969.1 2928028 2929896 R KEGG: mfa:Mfla_2626 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2928028..2929896) Methylovorus glucosetrophus SIP3-4 8173460 YP_003052535.1 CDS Msip34_2771 NC_012969.1 2930041 2930772 R KEGG: mfa:Mfla_2629 hypothetical protein; hypothetical protein complement(2930041..2930772) Methylovorus glucosetrophus SIP3-4 8173461 YP_003052536.1 CDS Msip34_2772 NC_012969.1 2930912 2931217 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: azo:azo0151 putative transcriptional repressor; ArsR family transcriptional regulator 2930912..2931217 Methylovorus glucosetrophus SIP3-4 8173543 YP_003052537.1 CDS Msip34_2773 NC_012969.1 2931229 2933364 D PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: azo:azo0150 bifunctional Aas protein; AMP-dependent synthetase and ligase 2931229..2933364 Methylovorus glucosetrophus SIP3-4 8173625 YP_003052538.1 CDS Msip34_2774 NC_012969.1 2933480 2934676 D PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2630 lysophospholipid transporter LplT; lysophospholipid transporter LplT 2933480..2934676 Methylovorus glucosetrophus SIP3-4 8173626 YP_003052539.1 CDS Msip34_2775 NC_012969.1 2934785 2934925 D PFAM: Entericidin EcnAB; KEGG: mfa:Mfla_2631 entericidin EcnAB; entericidin EcnAB 2934785..2934925 Methylovorus glucosetrophus SIP3-4 8173627 YP_003052540.1 CDS Msip34_2776 NC_012969.1 2934984 2936663 R KEGG: cak:Caul_4884 serralysin; PFAM: peptidase M10A and M12B matrixin and adamalysin; Hemolysin-type calcium-binding region; SMART: peptidase metallopeptidase; serralysin complement(2934984..2936663) Methylovorus glucosetrophus SIP3-4 8173628 YP_003052541.1 CDS Msip34_2777 NC_012969.1 2936863 2936934 D TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 2936863..2936934 Methylovorus glucosetrophus SIP3-4 8173629 YP_003052542.1 CDS Msip34_2778 NC_012969.1 2937137 2937523 D PFAM: DoxX family protein; KEGG: mfa:Mfla_2633 DoxX; DoxX family protein 2937137..2937523 Methylovorus glucosetrophus SIP3-4 8173630 YP_003052543.1 CDS Msip34_2779 NC_012969.1 2937565 2938335 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mfa:Mfla_2634 extradiol ring-cleavage dioxygenase III subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 2937565..2938335 Methylovorus glucosetrophus SIP3-4 8173631 YP_003052544.1 CDS Msip34_2780 NC_012969.1 2938399 2939640 R PFAM: MltA domain protein; 3D domain protein; KEGG: mfa:Mfla_2635 MltA; MltA domain-containing protein complement(2938399..2939640) Methylovorus glucosetrophus SIP3-4 8173632 YP_003052545.1 CDS Msip34_2781 NC_012969.1 2939650 2940033 R PFAM: ApaG domain protein; KEGG: tbd:Tbd_2231 ApaG; ApaG domain-containing protein complement(2939650..2940033) Methylovorus glucosetrophus SIP3-4 8173633 YP_003052546.1 CDS thiG NC_012969.1 2940036 2940815 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(2940036..2940815) Methylovorus glucosetrophus SIP3-4 8173634 YP_003052547.1 CDS Msip34_2783 NC_012969.1 2940822 2941028 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mfa:Mfla_2638 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(2940822..2941028) Methylovorus glucosetrophus SIP3-4 8173635 YP_003052548.1 CDS Msip34_2784 NC_012969.1 2941329 2943011 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_2639 tetratricopeptide TPR_2; hypothetical protein 2941329..2943011 Methylovorus glucosetrophus SIP3-4 8173636 YP_003052549.1 CDS Msip34_2785 NC_012969.1 2943014 2944162 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; KEGG: mfa:Mfla_2640 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2943014..2944162 Methylovorus glucosetrophus SIP3-4 8173637 YP_003052550.1 CDS Msip34_2786 NC_012969.1 2944198 2944422 D KEGG: dac:Daci_0615 acyl carrier protein-related protein; acyl carrier protein-like protein 2944198..2944422 Methylovorus glucosetrophus SIP3-4 8173638 YP_003052551.1 CDS Msip34_2787 NC_012969.1 2944447 2945499 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mfa:Mfla_2642 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase III 2944447..2945499 Methylovorus glucosetrophus SIP3-4 8173639 YP_003052552.1 CDS Msip34_2788 NC_012969.1 2945496 2946260 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pfl:PFL_1658 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 2945496..2946260 Methylovorus glucosetrophus SIP3-4 8173640 YP_003052553.1 CDS Msip34_2789 NC_012969.1 2946263 2946916 D KEGG: mfa:Mfla_2645 acetyltransferase; acetyltransferase 2946263..2946916 Methylovorus glucosetrophus SIP3-4 8173641 YP_003052554.1 CDS Msip34_2790 NC_012969.1 2946921 2948225 D TIGRFAM: methyltransferase FkbM family; KEGG: pfl:PFL_1662 methyltransferase FkbM family protein; FkbM family methyltransferase 2946921..2948225 Methylovorus glucosetrophus SIP3-4 8173642 YP_003052555.1 CDS Msip34_2791 NC_012969.1 2948233 2949348 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: sdn:Sden_3114 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 2948233..2949348 Methylovorus glucosetrophus SIP3-4 8173643 YP_003052556.1 CDS Msip34_2792 NC_012969.1 2949353 2951848 D PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: cti:RALTA_B1096 conserved hypothetical protein; putative anhydrase/acetyltransferase motif; type 12 methyltransferase 2949353..2951848 Methylovorus glucosetrophus SIP3-4 8173644 YP_003052557.1 CDS Msip34_2793 NC_012969.1 2951845 2953653 D TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_2400 methyltransferase FkbM; FkbM family methyltransferase 2951845..2953653 Methylovorus glucosetrophus SIP3-4 8173645 YP_003052558.1 CDS Msip34_2794 NC_012969.1 2953773 2953979 D PFAM: CsbD family protein; KEGG: mfa:Mfla_2651 CsbD-like protein; CsbD family protein 2953773..2953979 Methylovorus glucosetrophus SIP3-4 8173646 YP_003052559.1 CDS Msip34_2795 NC_012969.1 2953996 2954523 D KEGG: mpt:Mpe_A1028 hypothetical protein; hypothetical protein 2953996..2954523 Methylovorus glucosetrophus SIP3-4 8173647 YP_003052560.1 CDS Msip34_2796 NC_012969.1 2954736 2954948 R hypothetical protein complement(2954736..2954948) Methylovorus glucosetrophus SIP3-4 8173649 YP_003052561.1 CDS Msip34_2797 NC_012969.1 2955094 2956506 R KEGG: mfa:Mfla_1553 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein; DNA polymerase III subunit epsilon complement(2955094..2956506) Methylovorus glucosetrophus SIP3-4 8173650 YP_003052562.1 CDS Msip34_2798 NC_012969.1 2956523 2956819 R hypothetical protein complement(2956523..2956819) Methylovorus glucosetrophus SIP3-4 8173651 YP_003052563.1 CDS Msip34_2799 NC_012969.1 2956914 2957078 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bav:BAV3013 rubredoxin; rubredoxin-type Fe(Cys)4 protein complement(2956914..2957078) Methylovorus glucosetrophus SIP3-4 8173652 YP_003052564.1 CDS Msip34_2800 NC_012969.1 2957215 2958045 D PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mfa:Mfla_2662 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 2957215..2958045 Methylovorus glucosetrophus SIP3-4 8173653 YP_003052565.1 CDS Msip34_2801 NC_012969.1 2958032 2958658 D KEGG: mfa:Mfla_2663 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2958032..2958658 Methylovorus glucosetrophus SIP3-4 8173654 YP_003052566.1 CDS Msip34_2802 NC_012969.1 2958655 2959941 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2958655..2959941 Methylovorus glucosetrophus SIP3-4 8173655 YP_003052567.1 CDS Msip34_2803 NC_012969.1 2960198 2964874 D PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: dar:Daro_0217 glutamate synthase (NADH) large subunit; glutamate synthase 2960198..2964874 Methylovorus glucosetrophus SIP3-4 8173656 YP_003052568.1 CDS Msip34_2804 NC_012969.1 2964875 2966302 D TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eba:ebA2251 glutamate synthase subunit beta; glutamate synthase, NADH/NADPH small subunit 2964875..2966302 Methylovorus glucosetrophus SIP3-4 8173657 YP_003052569.1 CDS Msip34_2805 NC_012969.1 2966369 2967433 D KEGG: mfa:Mfla_2666 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 2966369..2967433 Methylovorus glucosetrophus SIP3-4 8173658 YP_003052570.1 CDS Msip34_2806 NC_012969.1 2967489 2969699 R KEGG: mfa:Mfla_2672 replication restart DNA helicase PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; primosomal protein N' complement(2967489..2969699) Methylovorus glucosetrophus SIP3-4 8173659 YP_003052571.1 CDS argS NC_012969.1 2969787 2971445 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2969787..2971445 Methylovorus glucosetrophus SIP3-4 8173660 YP_003052572.1 CDS Msip34_2808 NC_012969.1 2971475 2972080 D PFAM: Sporulation domain protein; KEGG: mfa:Mfla_2674 sporulation related; sporulation domain-containing protein 2971475..2972080 Methylovorus glucosetrophus SIP3-4 8173661 YP_003052573.1 CDS Msip34_2809 NC_012969.1 2972148 2972780 D PFAM: DSBA oxidoreductase; KEGG: mfa:Mfla_2675 DsbA oxidoreductase; DSBA oxidoreductase 2972148..2972780 Methylovorus glucosetrophus SIP3-4 8173662 YP_003052574.1 CDS Msip34_2810 NC_012969.1 2972789 2973607 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_2676 short chain dehydrogenase; short chain dehydrogenase 2972789..2973607 Methylovorus glucosetrophus SIP3-4 8173663 YP_003052575.1 CDS Msip34_2811 NC_012969.1 2973654 2976503 R KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2973654..2976503) Methylovorus glucosetrophus SIP3-4 8173664 YP_003052576.1 CDS Msip34_2812 NC_012969.1 2976914 2978743 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(2976914..2978743) Methylovorus glucosetrophus SIP3-4 8173665 YP_003052577.1 CDS Msip34_2813 NC_012969.1 2978766 2980124 R KEGG: mfa:Mfla_2742 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase complement(2978766..2980124) Methylovorus glucosetrophus SIP3-4 8173666 YP_003052578.1 CDS atpC NC_012969.1 2980209 2980634 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(2980209..2980634) Methylovorus glucosetrophus SIP3-4 8173667 YP_003052579.1 CDS Msip34_2815 NC_012969.1 2980658 2982055 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2980658..2982055) Methylovorus glucosetrophus SIP3-4 8173668 YP_003052580.1 CDS Msip34_2816 NC_012969.1 2982102 2982965 R TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: mfa:Mfla_2745 ATP synthase F1, gamma subunit; ATP synthase F1 subunit gamma complement(2982102..2982965) Methylovorus glucosetrophus SIP3-4 8173669 YP_003052581.1 CDS Msip34_2817 NC_012969.1 2983009 2984550 R KEGG: mfa:Mfla_2746 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha complement(2983009..2984550) Methylovorus glucosetrophus SIP3-4 8173670 YP_003052582.1 CDS Msip34_2818 NC_012969.1 2984560 2985096 R TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mfa:Mfla_2747 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta complement(2984560..2985096) Methylovorus glucosetrophus SIP3-4 8173671 YP_003052583.1 CDS Msip34_2819 NC_012969.1 2985104 2985574 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(2985104..2985574) Methylovorus glucosetrophus SIP3-4 8173672 YP_003052584.1 CDS Msip34_2820 NC_012969.1 2985622 2985897 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2985622..2985897) Methylovorus glucosetrophus SIP3-4 8173673 YP_003052585.1 CDS Msip34_2821 NC_012969.1 2985950 2986753 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2985950..2986753) Methylovorus glucosetrophus SIP3-4 8173674 YP_003052586.1 CDS Msip34_2822 NC_012969.1 2986763 2987134 R PFAM: ATP synthase I chain; KEGG: mfa:Mfla_2751 ATP synthase protein I; ATP synthase I chain complement(2986763..2987134) Methylovorus glucosetrophus SIP3-4 8173675 YP_003052587.1 CDS Msip34_2823 NC_012969.1 2987241 2988092 R KEGG: mfa:Mfla_2752 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein complement(2987241..2988092) Methylovorus glucosetrophus SIP3-4 8173676 YP_003052588.1 CDS Msip34_2824 NC_012969.1 2988102 2988884 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2753 chromosome segregation ATPase; Cobyrinic acid ac-diamide synthase complement(2988102..2988884) Methylovorus glucosetrophus SIP3-4 8173677 YP_003052589.1 CDS Msip34_2825 NC_012969.1 2988888 2989547 R TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mfa:Mfla_2754 methyltransferase GidB; methyltransferase GidB complement(2988888..2989547) Methylovorus glucosetrophus SIP3-4 8173678 YP_003052590.1 CDS Msip34_2826 NC_012969.1 2989544 2991439 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(2989544..2991439) Methylovorus glucosetrophus SIP3-4 8173679 YP_003052591.1 CDS Msip34_2827 NC_012969.1 2991589 2992929 R TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: mfa:Mfla_2757 tRNA modification GTPase TrmE; tRNA modification GTPase TrmE complement(2991589..2992929) Methylovorus glucosetrophus SIP3-4 8173680 YP_003052592.1 CDS Msip34_2828 NC_012969.1 2992916 2994565 R PFAM: 60 kDa inner membrane insertion protein; KEGG: mfa:Mfla_2758 protein translocase subunit YidC; 60 kDa inner membrane insertion protein complement(2992916..2994565) Methylovorus glucosetrophus SIP3-4 8173681 YP_003052593.1 CDS Msip34_2829 NC_012969.1 2994623 2994841 R PFAM: protein of unknown function DUF37; KEGG: mfa:Mfla_2759 hypothetical protein; hypothetical protein complement(2994623..2994841) Methylovorus glucosetrophus SIP3-4 8173682 YP_003052594.1 CDS rnpA NC_012969.1 2994838 2995215 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2994838..2995215) Methylovorus glucosetrophus SIP3-4 8173683 YP_003052595.1 CDS Msip34_2844 NC_012970.1 330 1472 R PFAM: integrase family protein; KEGG: bpy:Bphyt_7273 integrase family protein; integrase family protein complement(330..1472) Methylovorus glucosetrophus SIP3-4 8174786 YP_003052596.1 CDS Msip34_2845 NC_012970.1 1475 1708 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_7399 XRE family transcriptional regulator; transcriptional regulator, XRE family complement(1475..1708) Methylovorus glucosetrophus SIP3-4 8174708 YP_003052597.1 CDS Msip34_2846 NC_012970.1 1850 2842 R KEGG: bav:BAV0381 plasmid-related protein; hypothetical protein complement(1850..2842) Methylovorus glucosetrophus SIP3-4 8174709 YP_003052598.1 CDS Msip34_2847 NC_012970.1 3117 3326 R KEGG: atc:AGR_C_3184 hypothetical protein; hypothetical protein complement(3117..3326) Methylovorus glucosetrophus SIP3-4 8174710 YP_003052599.1 CDS Msip34_2848 NC_012970.1 3495 3620 D hypothetical protein 3495..3620 Methylovorus glucosetrophus SIP3-4 8174711 YP_003052600.1 CDS Msip34_2849 NC_012970.1 4133 5461 D PFAM: initiator RepB protein; KEGG: bmj:BMULJ_05362 replication protein; initiator RepB protein 4133..5461 Methylovorus glucosetrophus SIP3-4 8174712 YP_003052601.1 CDS Msip34_2850 NC_012970.1 5699 6013 R KEGG: GI24167 gene product from transcript GI24167-RA; hypothetical protein complement(5699..6013) Methylovorus glucosetrophus SIP3-4 8174713 YP_003052602.1 CDS Msip34_2851 NC_012970.1 6054 7082 R hypothetical protein complement(6054..7082) Methylovorus glucosetrophus SIP3-4 8174714 YP_003052603.1 CDS Msip34_2852 NC_012970.1 7097 7837 R hypothetical protein complement(7097..7837) Methylovorus glucosetrophus SIP3-4 8174715 YP_003052604.1 CDS Msip34_2853 NC_012970.1 7862 8629 R KEGG: xfa:XFa0050 hypothetical protein; hypothetical protein complement(7862..8629) Methylovorus glucosetrophus SIP3-4 8174716 YP_003052605.1 CDS Msip34_2854 NC_012970.1 8738 9415 R KEGG: ppf:Pput_3809 ribonuclease; hypothetical protein complement(8738..9415) Methylovorus glucosetrophus SIP3-4 8174717 YP_003052606.1 CDS Msip34_2855 NC_012970.1 10396 10620 D KEGG: mms:mma_3033 hypothetical protein; hypothetical protein 10396..10620 Methylovorus glucosetrophus SIP3-4 8174718 YP_003052607.1 CDS Msip34_2856 NC_012970.1 10642 11106 D hypothetical protein 10642..11106 Methylovorus glucosetrophus SIP3-4 8174719 YP_003052608.1 CDS Msip34_2857 NC_012970.1 11150 12223 D hypothetical protein 11150..12223 Methylovorus glucosetrophus SIP3-4 8174720 YP_003052609.1 CDS Msip34_2858 NC_012970.1 12245 14812 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: bvi:Bcep1808_7634 relaxase/mobilization nuclease family protein; Relaxase/mobilization nuclease family protein 12245..14812 Methylovorus glucosetrophus SIP3-4 8174721 YP_003052610.1 CDS Msip34_2859 NC_012970.1 14846 15445 D KEGG: vha:VIBHAR_06812 hypothetical protein; hypothetical protein 14846..15445 Methylovorus glucosetrophus SIP3-4 8174722 YP_003052611.1 CDS Msip34_2860 NC_012970.1 15432 16202 D KEGG: reh:H16_B0351 hypothetical protein; hypothetical protein 15432..16202 Methylovorus glucosetrophus SIP3-4 8174723 YP_003052612.1 CDS Msip34_2861 NC_012970.1 16205 17482 R PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein; DNA-directed DNA polymerase complement(16205..17482) Methylovorus glucosetrophus SIP3-4 8174724 YP_003052613.1 CDS Msip34_2862 NC_012970.1 17485 17970 R PFAM: peptidase S24 and S26 domain protein; KEGG: lhk:LHK_01580 UmuD protein; peptidase S24 and S26 domain protein complement(17485..17970) Methylovorus glucosetrophus SIP3-4 8174725 YP_003052614.1 CDS Msip34_2863 NC_012970.1 18016 18666 R PFAM: protein of unknown function DUF159; KEGG: rfr:Rfer_4344 hypothetical protein; hypothetical protein complement(18016..18666) Methylovorus glucosetrophus SIP3-4 8174726 YP_003052615.1 CDS Msip34_2864 NC_012970.1 18713 19621 R PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_A4124 LuxR family transcriptional regulator; transcriptional regulator, LuxR family complement(18713..19621) Methylovorus glucosetrophus SIP3-4 8174727 YP_003052616.1 CDS Msip34_2865 NC_012970.1 19625 19957 R KEGG: rme:Rmet_2824 hypothetical protein; hypothetical protein complement(19625..19957) Methylovorus glucosetrophus SIP3-4 8174728 YP_003052617.1 CDS Msip34_2866 NC_012970.1 20004 20117 R hypothetical protein complement(20004..20117) Methylovorus glucosetrophus SIP3-4 8174729 YP_003052618.1 CDS Msip34_2867 NC_012970.1 20187 20471 R hypothetical protein complement(20187..20471) Methylovorus glucosetrophus SIP3-4 8174730 YP_003052619.1 CDS Msip34_2868 NC_012970.1 20648 21097 R KEGG: bpy:Bphyt_7384 hypothetical protein; hypothetical protein complement(20648..21097) Methylovorus glucosetrophus SIP3-4 8174731 YP_003052620.1 CDS Msip34_2869 NC_012970.1 21186 22427 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: reh:PHG325 putative DNA methyltransferase; DNA methylase N-4/N-6 domain protein complement(21186..22427) Methylovorus glucosetrophus SIP3-4 8174732 YP_003052621.1 CDS Msip34_2870 NC_012970.1 22438 22959 R KEGG: mpt:Mpe_B0075 hypothetical protein; hypothetical protein complement(22438..22959) Methylovorus glucosetrophus SIP3-4 8174733 YP_003052622.1 CDS Msip34_2871 NC_012970.1 22968 23363 R hypothetical protein complement(22968..23363) Methylovorus glucosetrophus SIP3-4 8174734 YP_003052623.1 CDS Msip34_2872 NC_012970.1 23376 23783 R KEGG: rpi:Rpic_1543 hypothetical protein; hypothetical protein complement(23376..23783) Methylovorus glucosetrophus SIP3-4 8174735 YP_003052624.1 CDS Msip34_2873 NC_012970.1 23843 24061 R hypothetical protein complement(23843..24061) Methylovorus glucosetrophus SIP3-4 8174736 YP_003052625.1 CDS Msip34_2874 NC_012970.1 24273 24599 R KEGG: afr:AFE_1099 ChpA protein; transcriptional modulator of MazE/toxin, MazF complement(24273..24599) Methylovorus glucosetrophus SIP3-4 8174737 YP_003052626.1 CDS Msip34_2875 NC_012970.1 24599 24832 R PFAM: SpoVT/AbrB domain protein; KEGG: ecf:ECH74115_5741 PemI protein 2; transcriptional regulator/antitoxin, MazE complement(24599..24832) Methylovorus glucosetrophus SIP3-4 8174738 YP_003052627.1 CDS Msip34_2876 NC_012970.1 24917 26284 R KEGG: pin:Ping_2006 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(24917..26284) Methylovorus glucosetrophus SIP3-4 8174739 YP_003052628.1 CDS Msip34_2877 NC_012970.1 26286 28058 R KEGG: abn:AB57_0262 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I complement(26286..28058) Methylovorus glucosetrophus SIP3-4 8174740 YP_003052629.1 CDS Msip34_2878 NC_012970.1 28058 28747 R PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7408 lytic transglycosylase, catalytic; lytic transglycosylase complement(28058..28747) Methylovorus glucosetrophus SIP3-4 8174741 YP_003052630.1 CDS Msip34_2879 NC_012970.1 28758 30410 R PFAM: C-5 cytosine-specific DNA methylase; KEGG: mpt:Mpe_B0340 C-5 cytosine-specific DNA methylase; C-5 cytosine-specific DNA methylase complement(28758..30410) Methylovorus glucosetrophus SIP3-4 8174742 YP_003052631.1 CDS Msip34_2880 NC_012970.1 30423 32882 R PFAM: TRAG family protein; KEGG: pna:Pnap_2530 TraG family protein; TRAG family protein complement(30423..32882) Methylovorus glucosetrophus SIP3-4 8174743 YP_003052632.1 CDS Msip34_2881 NC_012970.1 33156 33899 D KEGG: mpt:Mpe_B0159 hypothetical protein; hypothetical protein 33156..33899 Methylovorus glucosetrophus SIP3-4 8174744 YP_003052633.1 CDS Msip34_2882 NC_012970.1 34032 36092 R PFAM: domain of unknown function DUF1738; KEGG: lpc:LPC_0184 DNA primase TraC; hypothetical protein complement(34032..36092) Methylovorus glucosetrophus SIP3-4 8174745 YP_003052634.1 CDS Msip34_2883 NC_012970.1 36082 36228 R hypothetical protein complement(36082..36228) Methylovorus glucosetrophus SIP3-4 8174746 YP_003052635.1 CDS Msip34_2884 NC_012970.1 36203 41599 R PFAM: N-6 DNA methylase; helicase domain protein; KEGG: bvi:Bcep1808_7553 helicase domain-containing protein; N-6 DNA methylase complement(36203..41599) Methylovorus glucosetrophus SIP3-4 8174747 YP_003052636.1 CDS Msip34_2885 NC_012970.1 41626 41934 R hypothetical protein complement(41626..41934) Methylovorus glucosetrophus SIP3-4 8174748 YP_003052637.1 CDS Msip34_2886 NC_012970.1 42056 43021 R KEGG: bvi:Bcep1808_5795 putative DNA primase, DNA transfer TraO-like protein; hypothetical protein complement(42056..43021) Methylovorus glucosetrophus SIP3-4 8174749 YP_003052638.1 CDS Msip34_2887 NC_012970.1 43037 44233 R hypothetical protein complement(43037..44233) Methylovorus glucosetrophus SIP3-4 8174750 YP_003052639.1 CDS Msip34_2888 NC_012970.1 44446 45090 R hypothetical protein complement(44446..45090) Methylovorus glucosetrophus SIP3-4 8174751 YP_003052640.1 CDS Msip34_2889 NC_012970.1 45146 46216 R hypothetical protein complement(45146..46216) Methylovorus glucosetrophus SIP3-4 8174752 YP_003052641.1 CDS Msip34_2890 NC_012970.1 46384 46494 D hypothetical protein 46384..46494 Methylovorus glucosetrophus SIP3-4 8174753 YP_003052642.1 CDS Msip34_2891 NC_012970.1 46541 47044 R KEGG: ajs:Ajs_4222 hypothetical protein; hypothetical protein complement(46541..47044) Methylovorus glucosetrophus SIP3-4 8174754 YP_003052643.1 CDS Msip34_2892 NC_012970.1 47560 47982 R PFAM: protein of unknown function DUF583; KEGG: bph:Bphy_4734 hypothetical protein; hypothetical protein complement(47560..47982) Methylovorus glucosetrophus SIP3-4 8174755 YP_003052644.1 CDS Msip34_2893 NC_012970.1 47982 48446 R KEGG: GI20420 gene product from transcript GI20420-RA; hypothetical protein complement(47982..48446) Methylovorus glucosetrophus SIP3-4 8174756 YP_003052645.1 CDS Msip34_2894 NC_012970.1 48662 48769 R hypothetical protein complement(48662..48769) Methylovorus glucosetrophus SIP3-4 8174757 YP_003052646.1 CDS Msip34_2895 NC_012970.1 48787 50289 R SMART: AAA ATPase; KEGG: ypi:YpsIP31758_B0025 hypothetical protein; AAA ATPase complement(48787..50289) Methylovorus glucosetrophus SIP3-4 8174758 YP_003052647.1 CDS Msip34_2896 NC_012970.1 50357 51472 R KEGG: sde:Sde_4009 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein complement(50357..51472) Methylovorus glucosetrophus SIP3-4 8174759 YP_003052648.1 CDS Msip34_2897 NC_012970.1 51496 52236 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gsu:GSU0106 soj protein; Cobyrinic acid ac-diamide synthase complement(51496..52236) Methylovorus glucosetrophus SIP3-4 8174760 YP_003052649.1 CDS Msip34_2898 NC_012970.1 52229 52483 R hypothetical protein complement(52229..52483) Methylovorus glucosetrophus SIP3-4 8174761 YP_003052650.1 CDS Msip34_2899 NC_012970.1 52674 53114 R KEGG: afe:Lferr_0274 hypothetical protein; hypothetical protein complement(52674..53114) Methylovorus glucosetrophus SIP3-4 8174762 YP_003052651.1 CDS Msip34_2900 NC_012970.1 53214 54485 R PFAM: conjugation TrbI family protein; KEGG: eba:p2B8 conjugal transfer protein TrbI; conjugation TrbI family protein complement(53214..54485) Methylovorus glucosetrophus SIP3-4 8174763 YP_003052652.1 CDS Msip34_2901 NC_012970.1 54495 55406 R PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: ajs:Ajs_4269 conjugal transfer protein TrbG; Conjugal transfer protein TrbG/VirB9/CagX complement(54495..55406) Methylovorus glucosetrophus SIP3-4 8174764 YP_003052653.1 CDS Msip34_2902 NC_012970.1 55448 56158 R PFAM: Conjugal transfer protein; KEGG: ppr:PBPRB1604 conjugal transfer protein TrbF; Conjugal transfer protein complement(55448..56158) Methylovorus glucosetrophus SIP3-4 8174765 YP_003052654.1 CDS Msip34_2903 NC_012970.1 56169 57518 R TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: aav:Aave_0395 TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL complement(56169..57518) Methylovorus glucosetrophus SIP3-4 8174766 YP_003052655.1 CDS Msip34_2904 NC_012970.1 57712 58461 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: kpe:KPK_1290 P-type conjugative transfer protein TrbJ; P-type conjugative transfer protein TrbJ complement(57712..58461) Methylovorus glucosetrophus SIP3-4 8174767 YP_003052656.1 CDS Msip34_2905 NC_012970.1 58522 60996 R PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: reu:Reut_D6505 CagE, TrbE, VirB component of type IV transporter system; CagE TrbE VirB component of type IV transporter system complement(58522..60996) Methylovorus glucosetrophus SIP3-4 8174768 YP_003052657.1 CDS Msip34_2906 NC_012970.1 61024 61353 R KEGG: avi:Avi_8332 conjugal transfer protein; conjugal transfer protein complement(61024..61353) Methylovorus glucosetrophus SIP3-4 8174769 YP_003052658.1 CDS Msip34_2907 NC_012970.1 61346 61777 R PFAM: Conjugal transfer protein TrbC; KEGG: pna:Pnap_4196 conjugal transfer protein TrbC; Conjugal transfer protein TrbC complement(61346..61777) Methylovorus glucosetrophus SIP3-4 8174770 YP_003052659.1 CDS Msip34_2908 NC_012970.1 61737 62702 R TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dps:DPPB12 conjugal transfer protein TrbB; P-type conjugative transfer ATPase TrbB complement(61737..62702) Methylovorus glucosetrophus SIP3-4 8174771 YP_003052660.1 CDS Msip34_2909 NC_012970.1 62712 62987 R hypothetical protein complement(62712..62987) Methylovorus glucosetrophus SIP3-4 8174772 YP_003052661.1 CDS Msip34_2910 NC_012970.1 63149 64075 D KEGG: ppg:PputGB1_0812 OmpA/MotB domain-containing protein; hypothetical protein 63149..64075 Methylovorus glucosetrophus SIP3-4 8174773 YP_003052662.1 CDS Msip34_2911 NC_012970.1 64078 64635 D KEGG: pol:Bpro_5453 hypothetical protein; hypothetical protein 64078..64635 Methylovorus glucosetrophus SIP3-4 8174774 YP_003052663.1 CDS Msip34_2912 NC_012970.1 64635 66314 D TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: type II and III secretion system protein; Secretin domain protein; KEGG: pol:Bpro_5240 type II and III secretion system protein; type IVB pilus formation outer membrane protein, R64 PilN family 64635..66314 Methylovorus glucosetrophus SIP3-4 8174775 YP_003052664.1 CDS Msip34_2913 NC_012970.1 66317 67636 D KEGG: pol:Bpro_5450 hypothetical protein; hypothetical protein 66317..67636 Methylovorus glucosetrophus SIP3-4 8174776 YP_003052665.1 CDS Msip34_2914 NC_012970.1 67623 68069 D TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: pol:Bpro_5242 hypothetical protein; type IV pilus biogenesis protein PilP 67623..68069 Methylovorus glucosetrophus SIP3-4 8174777 YP_003052666.1 CDS Msip34_2915 NC_012970.1 68095 69588 D PFAM: type II secretion system protein E; KEGG: pol:Bpro_5243 type II secretion system protein E; type II secretion system protein E 68095..69588 Methylovorus glucosetrophus SIP3-4 8174778 YP_003052667.1 CDS Msip34_2916 NC_012970.1 69615 70697 D PFAM: type II secretion system protein; KEGG: pol:Bpro_5244 type II secretion system protein; type II secretion system protein 69615..70697 Methylovorus glucosetrophus SIP3-4 8174779 YP_003052668.1 CDS Msip34_2917 NC_012970.1 70716 71246 D PFAM: PilS domain protein; KEGG: pol:Bpro_5245 type IV pilus biogenesis protein, putative; PilS domain-containing protein 70716..71246 Methylovorus glucosetrophus SIP3-4 8174780 YP_003052669.1 CDS Msip34_2918 NC_012970.1 71261 72187 D PFAM: type II secretion system protein E; KEGG: pol:Bpro_5246 type II secretion system protein E; type II secretion system protein E 71261..72187 Methylovorus glucosetrophus SIP3-4 8174781 YP_003052670.1 CDS Msip34_2919 NC_012970.1 72214 72642 D PFAM: PilM inner membrane family protein; KEGG: pol:Bpro_5444 PilM protein, putative; PilM inner membrane family protein 72214..72642 Methylovorus glucosetrophus SIP3-4 8174782 YP_003052671.1 CDS Msip34_2920 NC_012970.1 72647 73723 D PFAM: type II secretion system protein E; KEGG: pol:Bpro_5248 type II secretion system protein E; type II secretion system protein E 72647..73723 Methylovorus glucosetrophus SIP3-4 8174783 YP_003052672.1 CDS Msip34_2921 NC_012970.1 73746 75206 D KEGG: pol:Bpro_5249 methylation; hypothetical protein 73746..75206 Methylovorus glucosetrophus SIP3-4 8174784 YP_003052673.1 CDS Msip34_2922 NC_012970.1 75509 76153 R KEGG: bte:BTH_II0776 type IV prepilin; hypothetical protein complement(75509..76153) Methylovorus glucosetrophus SIP3-4 8174785 YP_003056831.1 CDS Msip34_2831 NC_012972.1 103 351 D KEGG: asa:ASA_1269 transcriptional protein; hypothetical protein 103..351 Methylovorus glucosetrophus SIP3-4 8174800 YP_003056832.1 CDS Msip34_2832 NC_012972.1 376 1059 R hypothetical protein complement(376..1059) Methylovorus glucosetrophus SIP3-4 8174788 YP_003056833.1 CDS Msip34_2833 NC_012972.1 1034 2119 R KEGG: sde:Sde_2755 hypothetical protein; hypothetical protein complement(1034..2119) Methylovorus glucosetrophus SIP3-4 8174789 YP_003056834.1 CDS Msip34_2834 NC_012972.1 2153 3346 R PFAM: integrase family protein; KEGG: nmu:Nmul_A2184 phage integrase; integrase family protein complement(2153..3346) Methylovorus glucosetrophus SIP3-4 8174790 YP_003056835.1 CDS Msip34_2835 NC_012972.1 3711 4676 R KEGG: net:Neut_1485 SppA protein; SppA protein complement(3711..4676) Methylovorus glucosetrophus SIP3-4 8174791 YP_003056836.1 CDS Msip34_2836 NC_012972.1 4861 6021 R PFAM: Zonular occludens toxin; KEGG: rpi:Rpic_1399 zonular occludens toxin; Zonular occludens toxin complement(4861..6021) Methylovorus glucosetrophus SIP3-4 8174792 YP_003056837.1 CDS Msip34_2837 NC_012972.1 6018 6317 R KEGG: dia:Dtpsy_0843 hypothetical protein; hypothetical protein complement(6018..6317) Methylovorus glucosetrophus SIP3-4 8174793 YP_003056838.1 CDS Msip34_2838 NC_012972.1 6318 7634 R KEGG: rpi:Rpic_2546 hypothetical protein; hypothetical protein complement(6318..7634) Methylovorus glucosetrophus SIP3-4 8174794 YP_003056839.1 CDS Msip34_2839 NC_012972.1 7748 7954 R hypothetical protein complement(7748..7954) Methylovorus glucosetrophus SIP3-4 8174795 YP_003056840.1 CDS Msip34_2840 NC_012972.1 7941 8315 R hypothetical protein complement(7941..8315) Methylovorus glucosetrophus SIP3-4 8174796 YP_003056841.1 CDS Msip34_2841 NC_012972.1 8302 9180 R KEGG: mfa:Mfla_1456 hypothetical protein; hypothetical protein complement(8302..9180) Methylovorus glucosetrophus SIP3-4 8174797 YP_003056842.1 CDS Msip34_2842 NC_012972.1 9250 9516 R hypothetical protein complement(9250..9516) Methylovorus glucosetrophus SIP3-4 8174798 YP_003056843.1 CDS Msip34_2843 NC_012972.1 9604 9810 R KEGG: bpy:Bphyt_0267 hypothetical protein; hypothetical protein complement(9604..9810) Methylovorus glucosetrophus SIP3-4 8174799 Msip34_R0002 tRNA Msip34_R0002 NC_012969.1 76556 76632 D tRNA-Ile 76556..76632 Methylovorus glucosetrophus SIP3-4 8172259 Msip34_R0003 tRNA Msip34_R0003 NC_012969.1 76647 76722 D tRNA-Ala 76647..76722 Methylovorus glucosetrophus SIP3-4 8172260 Msip34_R0006 tRNA Msip34_R0006 NC_012969.1 90812 90888 D tRNA-Pro 90812..90888 Methylovorus glucosetrophus SIP3-4 8172272 Msip34_R0007 tRNA Msip34_R0007 NC_012969.1 90915 90991 D tRNA-Arg 90915..90991 Methylovorus glucosetrophus SIP3-4 8172273 Msip34_R0008 tRNA Msip34_R0008 NC_012969.1 91017 91092 D tRNA-His 91017..91092 Methylovorus glucosetrophus SIP3-4 8172274 Msip34_R0009 tRNA Msip34_R0009 NC_012969.1 159799 159874 R tRNA-Phe complement(159799..159874) Methylovorus glucosetrophus SIP3-4 8173954 Msip34_R0010 tRNA Msip34_R0010 NC_012969.1 303188 303263 D tRNA-Thr 303188..303263 Methylovorus glucosetrophus SIP3-4 8173792 Msip34_R0011 tRNA Msip34_R0011 NC_012969.1 303326 303410 D tRNA-Tyr 303326..303410 Methylovorus glucosetrophus SIP3-4 8173793 Msip34_R0012 tRNA Msip34_R0012 NC_012969.1 303451 303526 D tRNA-Gly 303451..303526 Methylovorus glucosetrophus SIP3-4 8173794 Msip34_R0013 tRNA Msip34_R0013 NC_012969.1 303551 303625 D tRNA-Thr 303551..303625 Methylovorus glucosetrophus SIP3-4 8173795 Msip34_R0014 tRNA Msip34_R0014 NC_012969.1 304923 304998 D tRNA-Trp 304923..304998 Methylovorus glucosetrophus SIP3-4 8173797 Msip34_R0016 tRNA Msip34_R0016 NC_012969.1 665874 665950 D tRNA-Met 665874..665950 Methylovorus glucosetrophus SIP3-4 8172531 Msip34_R0018 tRNA Msip34_R0018 NC_012969.1 667876 667952 D tRNA-Ile 667876..667952 Methylovorus glucosetrophus SIP3-4 8172533 Msip34_R0019 tRNA Msip34_R0019 NC_012969.1 667967 668042 D tRNA-Ala 667967..668042 Methylovorus glucosetrophus SIP3-4 8172534 Msip34_R0022 tRNA Msip34_R0022 NC_012969.1 702584 702668 D tRNA-Leu 702584..702668 Methylovorus glucosetrophus SIP3-4 8172809 Msip34_R0023 tRNA Msip34_R0023 NC_012969.1 717805 717881 D tRNA-Pro 717805..717881 Methylovorus glucosetrophus SIP3-4 8172825 Msip34_R0024 tRNA Msip34_R0024 NC_012969.1 723125 723201 D tRNA-Val 723125..723201 Methylovorus glucosetrophus SIP3-4 8172832 Msip34_R0025 tRNA Msip34_R0025 NC_012969.1 757642 757718 D tRNA-Pro 757642..757718 Methylovorus glucosetrophus SIP3-4 8172866 Msip34_R0026 tRNA Msip34_R0026 NC_012969.1 857572 857647 R tRNA-Lys complement(857572..857647) Methylovorus glucosetrophus SIP3-4 8172720 Msip34_R0027 tRNA Msip34_R0027 NC_012969.1 1057601 1057676 D tRNA-Gly 1057601..1057676 Methylovorus glucosetrophus SIP3-4 8173177 Msip34_R0028 tRNA Msip34_R0028 NC_012969.1 1057746 1057819 D tRNA-Cys 1057746..1057819 Methylovorus glucosetrophus SIP3-4 8173178 Msip34_R0029 tRNA Msip34_R0029 NC_012969.1 1057826 1057901 D tRNA-Gly 1057826..1057901 Methylovorus glucosetrophus SIP3-4 8173179 Msip34_R0030 tRNA Msip34_R0030 NC_012969.1 1072951 1073037 D tRNA-Leu 1072951..1073037 Methylovorus glucosetrophus SIP3-4 8173189 Msip34_R0031 tRNA Msip34_R0031 NC_012969.1 1093656 1093731 D tRNA-Arg 1093656..1093731 Methylovorus glucosetrophus SIP3-4 8173213 Msip34_R0033 tRNA Msip34_R0033 NC_012969.1 1281849 1281938 R tRNA-Ser complement(1281849..1281938) Methylovorus glucosetrophus SIP3-4 8171893 Msip34_R0034 tRNA Msip34_R0034 NC_012969.1 1357930 1358005 R tRNA-Asn complement(1357930..1358005) Methylovorus glucosetrophus SIP3-4 8172036 Msip34_R0035 tRNA Msip34_R0035 NC_012969.1 1358063 1358138 R tRNA-Asn complement(1358063..1358138) Methylovorus glucosetrophus SIP3-4 8172037 Msip34_R0036 tRNA Msip34_R0036 NC_012969.1 1426811 1426886 R tRNA-Glu complement(1426811..1426886) Methylovorus glucosetrophus SIP3-4 8171932 Msip34_R0037 tRNA Msip34_R0037 NC_012969.1 1426977 1427052 R tRNA-Ala complement(1426977..1427052) Methylovorus glucosetrophus SIP3-4 8171933 Msip34_R0038 tRNA Msip34_R0038 NC_012969.1 1526701 1526790 R tRNA-Ser complement(1526701..1526790) Methylovorus glucosetrophus SIP3-4 8173899 Msip34_R0039 tRNA Msip34_R0039 NC_012969.1 1566448 1566524 R tRNA-Asp complement(1566448..1566524) Methylovorus glucosetrophus SIP3-4 8174022 Msip34_R0040 tRNA Msip34_R0040 NC_012969.1 1566581 1566656 R tRNA-Val complement(1566581..1566656) Methylovorus glucosetrophus SIP3-4 8174023 Msip34_R0041 tRNA Msip34_R0041 NC_012969.1 1572926 1573010 R tRNA-Leu complement(1572926..1573010) Methylovorus glucosetrophus SIP3-4 8174029 Msip34_R0042 tRNA Msip34_R0042 NC_012969.1 1770564 1770654 R tRNA-Ser complement(1770564..1770654) Methylovorus glucosetrophus SIP3-4 8174159 Msip34_R0044 tRNA Msip34_R0044 NC_012969.1 1824522 1824606 D tRNA-Leu 1824522..1824606 Methylovorus glucosetrophus SIP3-4 8172672 Msip34_R0045 tRNA Msip34_R0045 NC_012969.1 2140652 2140728 D tRNA-Gln 2140652..2140728 Methylovorus glucosetrophus SIP3-4 8173064 Msip34_R0046 tRNA Msip34_R0046 NC_012969.1 2144338 2144414 D tRNA-Met 2144338..2144414 Methylovorus glucosetrophus SIP3-4 8173069 Msip34_R0047 tRNA Msip34_R0047 NC_012969.1 2210780 2210852 D tRNA-Met 2210780..2210852 Methylovorus glucosetrophus SIP3-4 8172337 Msip34_R0048 tRNA Msip34_R0048 NC_012969.1 2317991 2318084 D tRNA-Ser 2317991..2318084 Methylovorus glucosetrophus SIP3-4 8174524 Msip34_R0049 tRNA Msip34_R0049 NC_012969.1 2318154 2318230 D tRNA-Arg 2318154..2318230 Methylovorus glucosetrophus SIP3-4 8174525 Msip34_R0050 tRNA Msip34_R0050 NC_012969.1 2353663 2353738 R tRNA-Lys complement(2353663..2353738) Methylovorus glucosetrophus SIP3-4 8173556 Msip34_R0051 tRNA Msip34_R0051 NC_012969.1 2406224 2406300 D tRNA-Arg 2406224..2406300 Methylovorus glucosetrophus SIP3-4 8173606 Msip34_R0052 tRNA Msip34_R0052 NC_012969.1 2409077 2409161 R tRNA-Leu complement(2409077..2409161) Methylovorus glucosetrophus SIP3-4 8173609 Msip34_R0053 tRNA Msip34_R0053 NC_012969.1 2508790 2508868 R tRNA-Met complement(2508790..2508868) Methylovorus glucosetrophus SIP3-4 8174391 Msip34_R0054 tRNA Msip34_R0054 NC_012969.1 2572743 2572818 R tRNA-Thr complement(2572743..2572818) Methylovorus glucosetrophus SIP3-4 8174458 Msip34_R0055 tRNA Msip34_R0055 NC_012969.1 2606997 2607073 R tRNA-Asp complement(2606997..2607073) Methylovorus glucosetrophus SIP3-4 8173712 Msip34_R0056 tRNA Msip34_R0056 NC_012969.1 2607088 2607163 R tRNA-Val complement(2607088..2607163) Methylovorus glucosetrophus SIP3-4 8173713 Msip34_R0057 tRNA Msip34_R0057 NC_012969.1 2954624 2954697 D tRNA-Gly 2954624..2954697 Methylovorus glucosetrophus SIP3-4 8173648 Msip34_R0001 rRNA Msip34_R0001 NC_012969.1 74944 76476 D 16S ribosomal RNA 74944..76476 Methylovorus glucosetrophus SIP3-4 8172258 Msip34_R0004 rRNA Msip34_R0004 NC_012969.1 77023 79901 D 23S ribosomal RNA 77023..79901 Methylovorus glucosetrophus SIP3-4 8172261 Msip34_R0005 rRNA Msip34_R0005 NC_012969.1 80074 80186 D 5S ribosomal RNA 80074..80186 Methylovorus glucosetrophus SIP3-4 8172262 Msip34_R0017 rRNA Msip34_R0017 NC_012969.1 666264 667796 D 16S ribosomal RNA 666264..667796 Methylovorus glucosetrophus SIP3-4 8172532 Msip34_R0020 rRNA Msip34_R0020 NC_012969.1 668343 671221 D 23S ribosomal RNA 668343..671221 Methylovorus glucosetrophus SIP3-4 8172535 Msip34_R0021 rRNA Msip34_R0021 NC_012969.1 671394 671506 D 5S ribosomal RNA 671394..671506 Methylovorus glucosetrophus SIP3-4 8172536