-- dump date   	20140619_145415
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003049777.1	KEGG: mfa:Mfla_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase
YP_003049778.1	KEGG: mfa:Mfla_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain
YP_003049779.1	KEGG: mfa:Mfla_0003 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein
YP_003049780.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: azo:azo1327 GTP-binding protein HflX
YP_003049781.1	PFAM: protein of unknown function RIO1; SMART: protein of unknown function RIO1; KEGG: tbd:Tbd_0611 hypothetical protein
YP_003049782.1	PFAM: protein of unknown function DUF190; KEGG: bpy:Bphyt_6221 protein of unknown function DUF190
YP_003049783.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: tau:Tola_2564 CrcB protein
YP_003049784.1	KEGG: mfa:Mfla_2597 hypothetical protein
YP_003049785.1	KEGG: mfa:Mfla_2596 proline-rich region
YP_003049786.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_003049787.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: mfa:Mfla_0006 glycoside hydrolase family protein
YP_003049789.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_2906 major facilitator superfamily drug (bicyclomycin) resistance translocase
YP_003049790.1	KEGG: mca:MCA0985 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein
YP_003049791.1	PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I
YP_003049792.1	KEGG: mfa:Mfla_0344 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003049793.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1043 sigma-54 dependent trancsriptional regulator
YP_003049794.1	KEGG: mfa:Mfla_1290 hypothetical protein
YP_003049795.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_0020 LysR family transcriptional regulator
YP_003049796.1	TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A
YP_003049797.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: mfa:Mfla_0022 zinc finger/thioredoxin putative
YP_003049798.1	TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: mfa:Mfla_0023 50S ribosomal protein L11P methyltransferase
YP_003049799.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mfa:Mfla_0024 biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
YP_003049800.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mfa:Mfla_0025 biotin carboxyl carrier protein
YP_003049801.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_003049802.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_0027 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003049803.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mfa:Mfla_0028 protein-disulfide reductase
YP_003049804.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: mfa:Mfla_0029 CutA1 divalent ion tolerance protein
YP_003049805.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: mfa:Mfla_0030 FxsA cytoplasmic membrane protein
YP_003049806.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_003049807.1	PFAM: HemY domain protein; KEGG: mfa:Mfla_0032 HemY-like protein
YP_003049808.1	PFAM: protein of unknown function DUF513 hemX; KEGG: mfa:Mfla_0033 protein of unknown function DUF513, HemX
YP_003049809.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mfa:Mfla_0034 uroporphyrinogen-III synthase
YP_003049810.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_003049811.1	PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: mfa:Mfla_0036 LytR/AlgR family transcriptional regulator
YP_003049812.1	PFAM: histidine kinase internal region; KEGG: mfa:Mfla_0037 histidine kinase internal region
YP_003049813.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_003049814.1	KEGG: mfa:Mfla_0009 hypothetical protein
YP_003049815.1	TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: pnu:Pnuc_1171 cellulose synthase (UDP-forming)
YP_003049816.1	PFAM: cellulose synthase subunit B; KEGG: bgl:bglu_2g21300 cellulose synthase regulatory subunit, cyclic di-GMP binding
YP_003049818.1	PFAM: glycoside hydrolase family 8; KEGG: pnu:Pnuc_1167 cellulase
YP_003049819.1	KEGG: bps:BPSS1580 cellulose biosynthesis protein
YP_003049820.1	KEGG: mfa:Mfla_0040 coproporphyrinogen III oxidase, anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003049821.1	KEGG: mfa:Mfla_0041 hypothetical protein
YP_003049822.1	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: mfa:Mfla_0042 Ham1-like protein
YP_003049823.1	KEGG: mfa:Mfla_0043 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_003049824.1	KEGG: mfa:Mfla_0044 protein serine/threonine phosphatases; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein
YP_003049825.1	PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mfa:Mfla_0045 serine/threonine protein kinase
YP_003049826.1	PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: mfa:Mfla_0046 hypothetical protein
YP_003049827.1	Essential for recycling GMP and indirectly, cGMP
YP_003049828.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_003049829.1	KEGG: mfa:Mfla_0050 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003049830.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mfa:Mfla_0051 endoribonuclease L-PSP
YP_003049831.1	KEGG: mfa:Mfla_0052 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase; helicase domain protein
YP_003049832.1	PFAM: Chorismate lyase; KEGG: mfa:Mfla_0053 chorismate lyase
YP_003049833.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mfa:Mfla_0054 4-hydroxybenzoate octaprenyltransferase
YP_003049834.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_003049835.1	PFAM: ribosomal protein S9; KEGG: mfa:Mfla_0056 SSU ribosomal protein S9P
YP_003049836.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_003049837.1	KEGG: mfa:Mfla_0058 hypothetical protein
YP_003049838.1	PFAM: protein of unknown function DUF583; KEGG: dar:Daro_0652 hypothetical protein
YP_003049839.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mfa:Mfla_0060 HesB/YadR/YfhF
YP_003049840.1	KEGG: mfa:Mfla_0061 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_003049841.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_003049842.1	PFAM: Peptidase M23; KEGG: mfa:Mfla_0063 peptidase M23B
YP_003049843.1	KEGG: mfa:Mfla_0064 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003049844.1	PFAM: protein of unknown function DUF150; KEGG: mfa:Mfla_0065 hypothetical protein
YP_003049845.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_003049846.1	TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein; elongation factor Tu domain 2 protein; GTP-binding protein HSR1-related; translation initiation factor IF-2 domain protein; Miro domain protein; KEGG: mfa:Mfla_0067 translation initiation factor 2
YP_003049847.1	TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: mfa:Mfla_0068 ribosome-binding factor A
YP_003049848.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: mfa:Mfla_0069 tRNA pseudouridine synthase B
YP_003049849.1	TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: mfa:Mfla_0070 SSU ribosomal protein S15P
YP_003049850.1	KEGG: mfa:Mfla_0071 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein
YP_003049851.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mfa:Mfla_0072 TraR/DksA family transcriptional regulator
YP_003049852.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mfa:Mfla_0073 methenyltetrahydrofolate cyclohydrolase
YP_003049853.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0074 two component, sigma54 specific, fis family transcriptional regulator
YP_003049854.1	PFAM: Sporulation domain protein; KEGG: mfa:Mfla_0075 general secretion pathway protein, ATPase
YP_003049855.1	TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; KEGG: mfa:Mfla_0076 type II and III secretion system protein
YP_003049856.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0077 TPR repeat-containing protein
YP_003049857.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_0078 type II secretion system protein E
YP_003049858.1	PFAM: type II secretion system protein; KEGG: mfa:Mfla_0079 type II secretion system protein
YP_003049859.1	KEGG: mfa:Mfla_0080 hypothetical protein
YP_003049860.1	KEGG: mfa:Mfla_0081 hypothetical protein
YP_003049861.1	KEGG: mfa:Mfla_0082 hypothetical protein
YP_003049862.1	KEGG: mfa:Mfla_0083 hypothetical protein
YP_003049863.1	KEGG: dar:Daro_3413 general secretion pathway protein H
YP_003049864.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mfa:Mfla_0085 UBA/ThiF-type NAD/FAD binding fold
YP_003049865.1	KEGG: dat:HRM2_08410 multidrug resistance protein (efflux pump/antiporter)
YP_003049866.1	PFAM: band 7 protein; SMART: band 7 protein; KEGG: mfa:Mfla_0086 SPFH domain-containing protein/band 7 family protein
YP_003049867.1	PFAM: protein of unknown function DUF107; KEGG: mfa:Mfla_0087 hypothetical protein
YP_003049868.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_003049869.1	KEGG: mms:mma_0639 hypothetical protein
YP_003049870.1	PFAM: SirA family protein; KEGG: mfa:Mfla_0093 SirA-like protein
YP_003049871.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_0094 rhodanese-like protein
YP_003049872.1	PFAM: sugar transferase; KEGG: pna:Pnap_3481 sugar transferase
YP_003049873.1	PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_1567 sigma-54 factor, interaction region
YP_003049875.1	PFAM: class II aldolase/adducin family protein; KEGG: mfa:Mfla_1566 class II aldolase/adducin-like protein
YP_003049876.1	KEGG: mfa:Mfla_1565 monooxygenase, putative
YP_003049877.1	KEGG: mfa:Mfla_1564 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA
YP_003049878.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1561 ABC transporter related
YP_003049879.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_1560 TonB-like protein
YP_003049880.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1559 MotA/TolQ/ExbB proton channel
YP_003049881.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1558 biopolymer transport protein ExbD/TolR
YP_003049882.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1557 binding-protein-dependent transport systems inner membrane component
YP_003049883.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1556 binding-protein-dependent transport systems inner membrane component
YP_003049884.1	KEGG: cja:CJA_2334 putative dibenzothiophene desulfurization enzyme B
YP_003049885.1	KEGG: pna:Pnap_4751 hypothetical protein
YP_003049886.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0992 TonB-dependent receptor, putative
YP_003049887.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: met:M446_1311 glucose-methanol-choline oxidoreductase
YP_003049888.1	PFAM: Aldehyde Dehydrogenase; KEGG: pla:Plav_0092 aldehyde dehydrogenase
YP_003049889.1	PFAM: major facilitator superfamily MFS_1; KEGG: pag:PLES_12641 putative major facilitator superfamily (MFS) transporter
YP_003049890.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1551 1-Cys peroxiredoxin
YP_003049891.1	KEGG: mfa:Mfla_1550 hypothetical protein
YP_003049892.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mfa:Mfla_1549 ABC transporter related
YP_003049893.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mfa:Mfla_1548 ABC transporter related
YP_003049894.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1547 TonB-dependent receptor
YP_003049895.1	KEGG: mfa:Mfla_1545 hypothetical protein
YP_003049896.1	PFAM: nitroreductase; KEGG: mfa:Mfla_1538 nitroreductase
YP_003049897.1	KEGG: mfa:Mfla_1535 alkanesulfonate monooxygenase
YP_003049898.1	PFAM: Luciferase-like monooxygenase; KEGG: mfa:Mfla_1534 alkanesulfonate monooxygenase
YP_003049899.1	KEGG: mms:mma_1577 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein
YP_003049900.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mfa:Mfla_1276 NAD-dependent epimerase/dehydratase
YP_003049901.1	PFAM: glycosyl transferase family 2; KEGG: net:Neut_0179 glycosyl transferase family protein
YP_003049902.1	PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13250 exopolysaccharide biosynthesis glycosyl transferase
YP_003049903.1	PFAM: glycosyl transferase family 2; KEGG: gsu:GSU1509 glycosyl transferase, group 2 family protein
YP_003049904.1	KEGG: pfl:PFL_2030 hypothetical protein
YP_003049905.1	KEGG: dal:Dalk_1659 hypothetical protein
YP_003049906.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cju:C8J_1337 hypothetical protein
YP_003049908.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase
YP_003049909.1	PFAM: N-acetylneuraminic acid synthase domain; Xylose isomerase domain protein TIM barrel; SAF domain protein; CBS domain containing protein; KEGG: neu:NE1570 type III antifreeze protein
YP_003049910.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet4835 lipopolysaccharide ABC exporter
YP_003049911.1	KEGG: mfa:Mfla_0098 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_003049912.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mfa:Mfla_0099 cobalamin-5'-phosphate synthase
YP_003049913.1	TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: mfa:Mfla_0100 phosphoglycerate mutase
YP_003049914.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat-containing protein
YP_003049915.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bra:BRADO7123 TPR domain-containing protein
YP_003049916.1	TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: har:HEAR0968 putative threonine-phosphate decarboxylase (L-threonine-O-3-phosphate decarboxylase)
YP_003049917.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_003049918.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_003049919.1	KEGG: mfa:Mfla_0110 hypothetical protein
YP_003049920.1	PFAM: cobalbumin biosynthesis protein; KEGG: mfa:Mfla_0113 adenosylcobinamide kinase
YP_003049921.1	PFAM: periplasmic binding protein; KEGG: mfa:Mfla_0114 periplasmic binding protein
YP_003049923.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: mfa:Mfla_0115 Cob(II)yrinic acid a,c-diamide reductase
YP_003049924.1	KEGG: mfa:Mfla_0116 hypothetical protein
YP_003049925.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_0117 MotA/TolQ/ExbB proton channel
YP_003049926.1	PFAM: CobN/magnesium chelatase; KEGG: mfa:Mfla_0118 hydrogenobyrinic acid a,c-diamide cobaltochelatase
YP_003049927.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_0119 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase
YP_003049928.1	KEGG: mfa:Mfla_0120 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_003049929.1	KEGG: mfa:Mfla_0121 hypothetical protein
YP_003049930.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0122 TonB-dependent receptor
YP_003049931.1	KEGG: psa:PST_1290 hypothetical protein
YP_003049932.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: azo:azo3556 putative TonB-dependent receptor
YP_003049933.1	KEGG: mfa:Mfla_0123 hypothetical protein
YP_003049934.1	PFAM: protein of unknown function DUF710; KEGG: mfa:Mfla_0124 cell division protein ZapA
YP_003049935.1	KEGG: mfa:Mfla_0125 hypothetical protein
YP_003049936.1	PFAM: protein of unknown function DUF55; KEGG: mfa:Mfla_0126 hypothetical protein
YP_003049937.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cvi:CV_2780 hypothetical protein
YP_003049938.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; SMART: WD-40 repeat protein; KEGG: mpt:Mpe_A1302 hypothetical protein
YP_003049939.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_003049940.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_003049941.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mfa:Mfla_0130 phosphate uptake regulator, PhoU
YP_003049942.1	PFAM: Ppx/GppA phosphatase; KEGG: mfa:Mfla_0131 Ppx/GppA phosphatase
YP_003049943.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_003049944.1	PFAM: Fe(II) trafficking protein YggX; KEGG: mfa:Mfla_0133 hypothetical protein
YP_003049945.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0134 TonB-dependent receptor
YP_003049946.1	KEGG: mfa:Mfla_0135 hypothetical protein
YP_003049947.1	PFAM: manganese and iron superoxide dismutase; KEGG: azo:azo1466 putative superoxide dismutase
YP_003049948.1	TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mfa:Mfla_0198 tyrosine recombinase XerC subunit
YP_003049949.1	PFAM: protein of unknown function DUF484; KEGG: mfa:Mfla_0197 hypothetical protein
YP_003049950.1	KEGG: mfa:Mfla_0196 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; Phenazine biosynthesis PhzC/PhzF protein
YP_003049951.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: mfa:Mfla_0195 lipid A biosynthesis acyltransferase
YP_003049952.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_003049953.1	KEGG: tgr:Tgr7_1532 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003049954.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_003049955.1	PFAM: membrane protein of unknown function; KEGG: mfa:Mfla_0192 membrane protein of unknown function
YP_003049956.1	KEGG: mfa:Mfla_0191 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_003049957.1	PFAM: protein of unknown function DUF494; KEGG: mfa:Mfla_0190 hypothetical protein
YP_003049958.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mfa:Mfla_0189 DNA processing protein DprA, putative
YP_003049959.1	PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_0188 peptidoglycan-binding LysM
YP_003049960.1	KEGG: mfa:Mfla_0187 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_003049961.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mfa:Mfla_0186 methionyl-tRNA formyltransferase
YP_003049962.1	PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_0185 M48 family peptidase
YP_003049963.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: mfa:Mfla_0184 sun protein
YP_003049964.1	KEGG: mfa:Mfla_0183 putative proline rich signal peptide protein
YP_003049965.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_0182 multi-sensor signal transduction histidine kinase
YP_003049966.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: mfa:Mfla_0181 two component, sigma54 specific, fis family transcriptional regulator
YP_003049967.1	PFAM: TfoX domain protein; KEGG: azo:azo2291 DNA transformation protein (competence activator)
YP_003049968.1	TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_0172 exodeoxyribonuclease III
YP_003049969.1	PFAM: glutaredoxin; KEGG: mms:mma_0670 hypothetical protein
YP_003049970.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mfa:Mfla_0150 oligopeptidase A
YP_003049971.1	KEGG: mfa:Mfla_0149 hypothetical protein
YP_003049972.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: mfa:Mfla_0148 phosphoenolpyruvate--protein phosphotransferase
YP_003049973.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mfa:Mfla_0147 HPrNtr
YP_003049974.1	PFAM: PTS system fructose subfamily IIA component; KEGG: mfa:Mfla_0146 PTS system fructose subfamily IIA component
YP_003049975.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0145 hypothetical protein
YP_003049976.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_003049977.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mfa:Mfla_0143 SSU ribosomal protein S30P / sigma 54 modulation protein
YP_003049978.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: mfa:Mfla_0142 sigma-54 (RpoN)
YP_003049979.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0141 ABC transporter related
YP_003049980.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: mfa:Mfla_0140 OstA-like protein
YP_003049981.1	PFAM: protein of unknown function DUF1239; KEGG: mfa:Mfla_0139 hypothetical protein
YP_003049982.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: mfa:Mfla_0138 phosphatase KdsC
YP_003049983.1	KEGG: mfa:Mfla_0137 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein
YP_003049984.1	PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: cti:RALTA_A0336 glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein
YP_003049985.1	PFAM: FAD dependent oxidoreductase; KEGG: mfa:Mfla_0136 FAD dependent oxidoreductase
YP_003049986.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: mfa:Mfla_1521 outer membrane chaperone Skp (OmpH)
YP_003049987.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mfa:Mfla_0199 GTP cyclohydrolase subunit MoaC
YP_003049988.1	PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_0200 peptidase M48, Ste24p
YP_003049989.1	KEGG: tbd:Tbd_0566 transmembrane proetin, twin-arginine translocation pathway signal
YP_003049990.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: ank:AnaeK_1592 sulphur oxidation protein SoxZ
YP_003049991.1	KEGG: mfa:Mfla_0991 hypothetical protein
YP_003049992.1	KEGG: rso:RSp0245 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein
YP_003049993.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: har:HEAR0028 alkyl hydroperoxide reductase subunit F (alkyl hydroperoxide reductase F52A protein)
YP_003049995.1	TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: mfa:Mfla_0204 regulatory inactivation of DnaA Hda protein
YP_003049996.1	PFAM: protein of unknown function UPF0118; KEGG: neu:NE0089 hypothetical protein
YP_003049997.1	KEGG: mfa:Mfla_0205 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003049998.1	KEGG: mfa:Mfla_0206 hypothetical protein
YP_003049999.1	KEGG: dar:Daro_3160 hypothetical protein
YP_003050000.1	PFAM: Fmu (Sun) domain protein; KEGG: mfa:Mfla_0208 Fmu (Sun)
YP_003050001.1	PFAM: sodium:dicarboxylate symporter; KEGG: nmu:Nmul_A0633 sodium:dicarboxylate symporter
YP_003050002.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: mfa:Mfla_0210 blue (type1) copper domain-containing protein
YP_003050003.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: tbd:Tbd_1985 integral membrane protein, DUF6
YP_003050004.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mfa:Mfla_0213 N-acetyl-anhydromuranmyl-L-alanine amidase
YP_003050005.1	PFAM: sodium/calcium exchanger membrane region; KEGG: tbd:Tbd_0802 Ca2+/H+ antiporter
YP_003050006.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0214 two component, sigma54 specific, fis family transcriptional regulator
YP_003050007.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_0215 signal transduction histidine kinase
YP_003050008.1	KEGG: mfa:Mfla_0216 hypothetical protein
YP_003050009.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_003050010.1	KEGG: mfa:Mfla_0218 putative transmembrane protein
YP_003050011.1	KEGG: mfa:Mfla_0219 hypothetical protein
YP_003050012.1	PFAM: RDD domain containing protein; KEGG: nmu:Nmul_A1054 RDD
YP_003050013.1	PFAM: permease YjgP/YjgQ family protein; KEGG: mfa:Mfla_0220 permease YjgP/YjgQ
YP_003050014.1	PFAM: permease YjgP/YjgQ family protein; KEGG: mfa:Mfla_0221 permease YjgP/YjgQ
YP_003050015.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_003050016.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: mfa:Mfla_0223 DNA polymerase III, chi subunit
YP_003050018.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: mfa:Mfla_0225 glycine cleavage system H protein
YP_003050019.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mfa:Mfla_0226 murein-dd-endopeptidase
YP_003050020.1	KEGG: mfa:Mfla_0227 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003050021.1	PFAM: PP-loop domain protein; KEGG: mfa:Mfla_0228 PP-loop
YP_003050022.1	Involved in pteridine salvage and antifolate resistance
YP_003050023.1	PFAM: protein of unknown function DUF185; KEGG: mfa:Mfla_0230 hypothetical protein
YP_003050024.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_003050025.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_003050026.1	PFAM: cytochrome c class I; KEGG: tbd:Tbd_0187 cytochrome c oxidase
YP_003050027.1	PFAM: ResB family protein; KEGG: mfa:Mfla_0233 ResB-like protein
YP_003050028.1	TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: mfa:Mfla_0234 cytochrome c assembly protein
YP_003050029.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_0235 ATP-binding region, ATPase-like protein
YP_003050030.1	KEGG: tbd:Tbd_0540 hypothetical protein
YP_003050031.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0237 ABC transporter related
YP_003050032.1	PFAM: protein of unknown function DUF140; KEGG: mfa:Mfla_0238 hypothetical protein
YP_003050033.1	PFAM: Mammalian cell entry related domain protein; KEGG: mfa:Mfla_0239 hypothetical protein
YP_003050034.1	PFAM: toluene tolerance family protein; KEGG: mfa:Mfla_0240 toluene tolerance
YP_003050035.1	KEGG: mfa:Mfla_0241 STAS domain-containing protein
YP_003050036.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0242 ABC transporter related
YP_003050037.1	PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_0243 hypothetical protein
YP_003050038.1	PFAM: BolA family protein; KEGG: mfa:Mfla_0244 BolA-like protein
YP_003050039.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mfa:Mfla_0245 glutaredoxin-like protein
YP_003050040.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: mfa:Mfla_0246 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003050041.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_003050042.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_003050043.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: tbd:Tbd_1712 histidinol-phosphate aminotransferase
YP_003050044.1	TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mfa:Mfla_0250 hexulose-6-phosphate synthase
YP_003050045.1	PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: mfa:Mfla_0251 imidazoleglycerol-phosphate dehydratase
YP_003050046.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_003050047.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_003050048.1	TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: mfa:Mfla_0254 imidazole glycerol phosphate synthase subunit HisF
YP_003050049.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_003050050.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_003050051.1	PFAM: histidine triad (HIT) protein; KEGG: mfa:Mfla_0257 histidine triad (HIT) protein
YP_003050052.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_003050053.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mfa:Mfla_0259 sec-independent protein translocase TatB
YP_003050054.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mfa:Mfla_0260 sec-independent protein translocase TatC
YP_003050056.1	KEGG: mfa:Mfla_0261 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein
YP_003050057.1	PFAM: protein of unknown function DUF34; KEGG: mfa:Mfla_0262 hypothetical protein
YP_003050058.1	KEGG: tbd:Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_003050059.1	PFAM: Cytochrome b/b6 domain; KEGG: tbd:Tbd_1832 cytochrome b subunit of cytochrome bc1
YP_003050060.1	PFAM: cytochrome c1; KEGG: nmu:Nmul_A1003 cytochrome c1
YP_003050061.1	PFAM: Glutathione S-transferase domain; KEGG: mfa:Mfla_0263 glutathione S-transferase-like protein
YP_003050062.1	PFAM: Stringent starvation protein B; KEGG: mfa:Mfla_0264 stringent starvation protein B
YP_003050063.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_003050064.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mfa:Mfla_0266 protein translocase subunit SecE/sec61 gamma
YP_003050065.1	KEGG: mfa:Mfla_0267 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein
YP_003050066.1	KEGG: mfa:Mfla_0268 50S ribosomal protein L11P; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11
YP_003050067.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_003050068.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_003050069.1	TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: mfa:Mfla_0271 50S ribosomal protein L12P
YP_003050070.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_003050071.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_003050072.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_003050073.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_003050074.1	TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: bph:Bphy_2843 translation elongation factor G
YP_003050075.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_003050076.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_003050077.1	PFAM: ribosomal protein L3; KEGG: mfa:Mfla_0279 50S ribosomal protein L3P
YP_003050078.1	PFAM: ribosomal protein L4/L1e; KEGG: mfa:Mfla_0280 50S ribosomal protein L4P
YP_003050079.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_003050080.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_003050081.1	TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: mfa:Mfla_0283 SSU ribosomal protein S19P
YP_003050082.1	TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: mfa:Mfla_0284 50S ribosomal protein L22P
YP_003050083.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_003050084.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_003050085.1	TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: mfa:Mfla_0287 50S ribosomal protein L29P
YP_003050086.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_003050088.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_003050089.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_003050090.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_003050091.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_003050092.1	PFAM: ribosomal protein S8; KEGG: mfa:Mfla_0293 SSU ribosomal protein S8P
YP_003050093.1	PFAM: ribosomal protein L6; KEGG: mfa:Mfla_0294 50S ribosomal protein L6P
YP_003050094.1	binds 5S rRNA along with protein L5 and L25
YP_003050095.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_003050096.1	TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: mfa:Mfla_0297 50S ribosomal protein L30P
YP_003050097.1	TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: mfa:Mfla_0298 50S ribosomal protein L15P
YP_003050098.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_003050099.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_003050100.1	TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: mfa:Mfla_0301 50S ribosomal protein L36P
YP_003050101.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_003050102.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_003050103.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_003050104.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_003050105.1	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: mfa:Mfla_0305 50S ribosomal protein L17P
YP_003050106.1	PFAM: glutaredoxin 2; KEGG: spc:Sputcn32_1633 glutaredoxin 2
YP_003050107.1	TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; KEGG: mfa:Mfla_0306 magnesium transporter
YP_003050108.1	PFAM: MscS Mechanosensitive ion channel; KEGG: mfa:Mfla_0307 MscS mechanosensitive ion channel
YP_003050109.1	PFAM: fatty acid desaturase; KEGG: nmu:Nmul_A2141 fatty acid desaturase
YP_003050110.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_003050111.1	required for 70S ribosome assembly
YP_003050112.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: mfa:Mfla_0313 deoxyuridine 5'-triphosphate nucleotidohydrolase
YP_003050113.1	KEGG: mfa:Mfla_0314 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein
YP_003050114.1	KEGG: abc:ACICU_00449 hypothetical protein
YP_003050115.1	TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: mfa:Mfla_0315 DNA repair protein RadC
YP_003050116.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_1063 transglutaminase domain-containing protein
YP_003050117.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: pna:Pnap_1064 hypothetical protein
YP_003050118.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_1065 transglutaminase domain-containing protein
YP_003050119.1	KEGG: mfa:Mfla_0333 hypothetical protein
YP_003050120.1	PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: tbd:Tbd_2310 assimilatory nitrate reductase (NADH) alpha subunit apoprotein
YP_003050121.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: dar:Daro_0817 assimilatory nitrite reductase (NAD(P)H) small subunit
YP_003050122.1	PFAM: Protein phosphatase 2C-like; tyrosine protein kinase; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mfa:Mfla_0320 protein serine/threonine phosphatases
YP_003050123.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_0321 nitrate transporter
YP_003050124.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: tbd:Tbd_2309 assimilatory nitrite reductase (NAD(P)H) large subunit precursor
YP_003050125.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0322 uroporphyrinogen-III C-methyltransferase
YP_003050126.1	KEGG: mfa:Mfla_0323 putative methyl-accepting chemotaxis sensory transducer
YP_003050127.1	KEGG: mfa:Mfla_0324 hypothetical protein
YP_003050128.1	KEGG: mfa:Mfla_0325 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003050129.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0326 nitrate transport permease
YP_003050130.1	KEGG: mfa:Mfla_0327 nitrate transporter periplasmic component
YP_003050131.1	PFAM: Nitrate and nitrite sensing domain protein; ANTAR domain protein; KEGG: mfa:Mfla_0329 response regulator receiver/ANTAR domain-containing protein
YP_003050133.1	KEGG: azo:azo3632 ABC transporter permease and ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003050135.1	KEGG: pol:Bpro_2400 hypothetical protein
YP_003050136.1	KEGG: spe:Spro_2645 lipoprotein
YP_003050137.1	PFAM: carbon starvation protein CstA; KEGG: mfa:Mfla_0334 carbon starvation protein CstA
YP_003050138.1	PFAM: protein of unknown function DUF466; KEGG: mfa:Mfla_0335 hypothetical protein
YP_003050139.1	KEGG: pnu:Pnuc_1609 hypothetical protein
YP_003050140.1	KEGG: asa:ASA_P5G016 hypothetical protein
YP_003050141.1	KEGG: bbr:BB4142 hypothetical protein
YP_003050142.1	KEGG: sml:Smlt2493 hypothetical protein
YP_003050143.1	KEGG: rpt:Rpal_3157 hypothetical protein
YP_003050145.1	TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mfa:Mfla_0339 prolipoprotein diacylglyceryl transferase
YP_003050146.1	KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003050147.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_003050148.1	PFAM: Aldose 1-epimerase; KEGG: mfa:Mfla_0341 aldose 1-epimerase
YP_003050149.1	PFAM: cytochrome c class I; KEGG: mfa:Mfla_0342 cytochrome c, class I
YP_003050150.1	PFAM: Endoribonuclease L-PSP; KEGG: lch:Lcho_2329 endoribonuclease L-PSP
YP_003050151.1	PFAM: amino acid permease-associated region; KEGG: mfa:Mfla_0345 amino acid permease-associated region
YP_003050152.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: wsu:WS1301 putative sodium/alanine symporter
YP_003050153.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_003050154.1	PFAM: SUA5/yciO/yrdC domain; KEGG: mfa:Mfla_0347 SUA5/YciO/YrdC-like protein
YP_003050155.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_003050156.1	involved in de novo purine biosynthesis
YP_003050157.1	PFAM: helix-turn-helix Fis-type; KEGG: mfa:Mfla_0350 helix-turn-helix, fis-type
YP_003050158.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: mfa:Mfla_0351 dihydrouridine synthase TIM-barrel protein nifR3
YP_003050159.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: pap:PSPA7_1369 MFS family transporter
YP_003050160.1	PFAM: protein of unknown function UPF0153; KEGG: dia:Dtpsy_0043 protein of unknown function UPF0153
YP_003050161.1	PFAM: molybdopterin binding domain; KEGG: mfa:Mfla_0357 molybdopterin binding domain-containing protein
YP_003050162.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: NIR_1; NADPH nitrite reductase; K00362 nitrite reductase (NAD(P)H) large subunit
YP_003050163.1	KEGG: mfa:Mfla_0358 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease
YP_003050164.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0359 hypothetical protein
YP_003050165.1	KEGG: mfa:Mfla_0360 hypothetical protein
YP_003050166.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_003050167.1	KEGG: mfa:Mfla_0362 hypothetical protein
YP_003050168.1	PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_0363 ATP-dependent DNA helicase UvrD
YP_003050169.1	PFAM: OmpA/MotB domain protein; KEGG: pfl:PFL_0745 OmpA family protein
YP_003050170.1	KEGG: spe:Spro_0673 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein
YP_003050171.1	KEGG: pfs:PFLU5211 hypothetical protein
YP_003050172.1	KEGG: dar:Daro_2258 heavy metal sensor kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003050173.1	KEGG: tgr:Tgr7_1208 two component heavy metal response transcriptional regulator, winged helix family; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_003050174.1	KEGG: mpt:Mpe_A1633 putative copper resistance-related lipoprotein
YP_003050175.1	PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: mfa:Mfla_1080 twin-arginine translocation pathway signal
YP_003050176.1	KEGG: pna:Pnap_4560 hypothetical protein
YP_003050177.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mfa:Mfla_0364 chaperonin GroEL
YP_003050178.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_003050179.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: azc:AZC_3902 putative cylclic diguanylate phosphodiesterase
YP_003050180.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mfa:Mfla_0161 YbaK/prolyl-tRNA synthetase associated region
YP_003050181.1	SMART: helicase c2; KEGG: pol:Bpro_1361 helicase C2
YP_003050182.1	KEGG: mfa:Mfla_0558 DNA topoisomerase, type I, putative
YP_003050183.1	KEGG: mfa:Mfla_2565 hypothetical protein
YP_003050184.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B3939 GntR family transcriptional regulator
YP_003050185.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: mfa:Mfla_1045 4Fe-4S ferredoxin, iron-sulfur binding
YP_003050186.1	KEGG: bcm:Bcenmc03_6097 hypothetical protein
YP_003050187.1	KEGG: bcm:Bcenmc03_6096 hypothetical protein
YP_003050188.1	KEGG: mfa:Mfla_1183 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS domain containing protein
YP_003050189.1	PFAM: Metal-dependent hydrolase HDOD; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; metal-dependent phosphohydrolase HD region; KEGG: mfa:Mfla_1184 histidine kinase
YP_003050190.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mms:mma_0756 TonB-dependent siderophore receptor
YP_003050191.1	PFAM: FecR protein; KEGG: neu:NE0534 putative transmembrane sensor
YP_003050192.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: neu:NE0533 RNA polymerase ECF-subfamily sigma-70 factor
YP_003050193.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pmy:Pmen_4555 PepSY-associated TM helix domain-containing protein
YP_003050194.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: mms:mma_2027 ECF subfamily RNA polymerase sigma factor
YP_003050195.1	PFAM: FecR protein; KEGG: neu:NE1095 putative transmembrane sensor
YP_003050196.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mms:mma_3483 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
YP_003050197.1	KEGG: pfl:PFL_0985 hypothetical protein
YP_003050198.1	PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_2644 hypothetical protein
YP_003050199.1	KEGG: reh:H16_B0119 putative iron uptake protein
YP_003050200.1	KEGG: mms:mma_3481 hypothetical protein
YP_003050201.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1082 hypothetical protein
YP_003050202.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: ppw:PputW619_3534 ABC transporter related
YP_003050203.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_3478 outer membrane efflux protein
YP_003050204.1	KEGG: mfa:Mfla_0376 hypothetical protein
YP_003050205.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mfa:Mfla_0377 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_003050206.1	KEGG: mfa:Mfla_0378 D-alanyl-D-alanine carboxypeptidase PBP3; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C
YP_003050208.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mfa:Mfla_0379 peptidylprolyl isomerase
YP_003050209.1	PFAM: OsmC family protein; KEGG: mfa:Mfla_0380 OsmC-like protein
YP_003050210.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mfa:Mfla_0381 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003050211.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hch:HCH_01398 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
YP_003050212.1	KEGG: mfa:Mfla_0382 hypothetical protein
YP_003050213.1	KEGG: lhk:LHK_01370 ubiquinone biosynthesis protein COQ7
YP_003050214.1	KEGG: mfa:Mfla_0383 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_003050215.1	TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: mfa:Mfla_0384 SelT/SelW/SelH selenoprotein
YP_003050216.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_0385 diguanylate phosphodiesterase
YP_003050217.1	PFAM: NLP/P60 protein; KEGG: mfa:Mfla_0388 NLP/P60
YP_003050219.1	PFAM: ABC-1 domain protein; KEGG: mfa:Mfla_0390 2-octaprenylphenol hydroxylase
YP_003050220.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mfa:Mfla_0391 hypothetical protein
YP_003050221.1	PFAM: protein of unknown function DUF403; KEGG: mfa:Mfla_0392 hypothetical protein
YP_003050222.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: mfa:Mfla_0393 transglutaminase-like protein
YP_003050223.1	KEGG: mfa:Mfla_0394 hypothetical protein
YP_003050224.1	PFAM: peptidase U32; KEGG: mfa:Mfla_0396 peptidase U32
YP_003050225.1	KEGG: rpt:Rpal_5188 putative exported protein of unknown function
YP_003050226.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_003050227.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mfa:Mfla_2277 methyltransferase
YP_003050228.1	TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: mfa:Mfla_2276 cell division protein, FtsL -like protein
YP_003050229.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mfa:Mfla_2275 peptidoglycan synthetase FtsI
YP_003050230.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2274 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_003050231.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2273 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003050232.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_003050233.1	TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_2271 UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_003050234.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mfa:Mfla_2270 cell cycle protein
YP_003050235.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_003050236.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_003050237.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_003050238.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_003050239.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mfa:Mfla_2265 cell division protein FtsQ
YP_003050240.1	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: mfa:Mfla_2264 cell division protein FtsA
YP_003050241.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_003050242.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_003050243.1	KEGG: dar:Daro_3491 hypothetical protein
YP_003050244.1	PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2261 lytic transglycosylase, catalytic
YP_003050245.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: mfa:Mfla_2260 NAD-dependent epimerase/dehydratase
YP_003050246.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: mfa:Mfla_2259 metal dependent phosphohydrolase
YP_003050247.1	PFAM: protein of unknown function DUF1555
YP_003050248.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_003050249.1	TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_2256 pyrimidine 5-nucleotidase
YP_003050250.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_003050251.1	PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mfa:Mfla_2254 formate-tetrahydrofolate ligase
YP_003050252.1	PFAM: heat shock protein Hsp20; KEGG: tbd:Tbd_2312 heat shock protein HSP20
YP_003050253.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_003050254.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rso:RS00399 manganese transport protein MntH
YP_003050255.1	PFAM: protein of unknown function DUF558; KEGG: mfa:Mfla_2251 hypothetical protein
YP_003050256.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_2250 hypothetical protein
YP_003050257.1	KEGG: rfr:Rfer_1673 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003050258.1	TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mfa:Mfla_2249 transketolase
YP_003050259.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: mfa:Mfla_2248 glyceraldehyde-3-phosphate dehydrogenase
YP_003050260.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_003050261.1	KEGG: mfa:Mfla_2244 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_003050262.1	KEGG: pst:PSPTO_0390 fructose-1,6-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II
YP_003050263.1	PFAM: phosphate-starvation-inducible E; KEGG: tbd:Tbd_2600 hypothetical protein
YP_003050264.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_003050265.1	PFAM: carbonic anhydrase; protein of unknown function DUF1232; KEGG: glo:Glov_0555 carbonate dehydratase
YP_003050266.1	PFAM: Inorganic pyrophosphatase; KEGG: mfa:Mfla_2240 inorganic diphosphatase
YP_003050267.1	TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mfa:Mfla_2594 uracil-DNA glycosylase
YP_003050268.1	PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_2239 hypothetical protein
YP_003050269.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2238 ABC transporter related
YP_003050270.1	PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_2237 hypothetical protein
YP_003050271.1	PFAM: protein of unknown function DUF721; KEGG: mfa:Mfla_2236 hypothetical protein
YP_003050272.1	PFAM: Peptidase M23; KEGG: mfa:Mfla_2235 peptidase M23B
YP_003050273.1	TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: mfa:Mfla_2234 protein translocase subunit SecA
YP_003050274.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mms:mma_0589 ammonium transporter
YP_003050275.1	KEGG: lch:Lcho_4374 hypothetical protein
YP_003050276.1	PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_7287 hypothetical protein
YP_003050277.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_003050278.1	PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: mfa:Mfla_2231 hypothetical protein
YP_003050279.1	TIGRFAM: mutator MutT protein; PFAM: thiamine monophosphate synthase; NUDIX hydrolase; KEGG: mfa:Mfla_2230 hypothetical protein
YP_003050280.1	KEGG: mfa:Mfla_2229 hypothetical protein
YP_003050281.1	PFAM: protein of unknown function DUF461; KEGG: mpt:Mpe_A0691 hypothetical protein
YP_003050282.1	PFAM: protein of unknown function DUF1342; KEGG: mfa:Mfla_2227 hypothetical protein
YP_003050283.1	KEGG: mfa:Mfla_2226 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_003050284.1	PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mfa:Mfla_2225 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A
YP_003050285.1	KEGG: mfa:Mfla_2224 hypothetical protein
YP_003050286.1	PFAM: Polyprenyl synthetase; KEGG: mfa:Mfla_2220 trans-hexaprenyltranstransferase
YP_003050287.1	TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: mfa:Mfla_2219 50S ribosomal protein L21P
YP_003050288.1	involved in the peptidyltransferase reaction during translation
YP_003050289.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_003050290.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_003050291.1	KEGG: mfa:Mfla_2215 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_003050292.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_003050293.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_003050294.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mfa:Mfla_2210 integral membrane protein MviN
YP_003050295.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: mfa:Mfla_2209 riboflavin kinase / FMN adenylyltransferase
YP_003050296.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mfa:Mfla_2208 isoleucyl-tRNA synthetase
YP_003050297.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_003050298.1	PFAM: oxidoreductase molybdopterin binding; KEGG: azc:AZC_1525 oxidoreductase
YP_003050299.1	KEGG: mfa:Mfla_0013 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B
YP_003050300.1	PFAM: protein of unknown function DUF808; KEGG: tbd:Tbd_0220 hypothetical protein
YP_003050301.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mfa:Mfla_2206 zinc-binding alcohol dehydrogenase
YP_003050304.1	PFAM: Catalase domain protein; KEGG: amc:MADE_00522 catalase
YP_003050305.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bxe:Bxe_A4150 hypothetical protein
YP_003050306.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bgl:bglu_1g31480 cytochrome d ubiquinol oxidase, subunit II
YP_003050307.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bcj:BCAL0785 cytochrome d ubiquinol oxidase subunit I
YP_003050309.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: mfa:Mfla_2202 response regulator receiver domain-containing protein
YP_003050310.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2201 periplasmic sensor signal transduction histidine kinase
YP_003050311.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: har:HEAR0058 putative TonB-dependent receptor protein
YP_003050312.1	KEGG: rso:RS05315 putative signal peptide protein
YP_003050313.1	KEGG: neu:NE1529 signal peptide protein
YP_003050314.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_2653 TonB-dependent receptor
YP_003050315.1	KEGG: pmy:Pmen_0570 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region
YP_003050316.1	KEGG: pap:PSPA7_0717 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003050317.1	KEGG: mfa:Mfla_2198 ATPase AAA-2; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase
YP_003050318.1	PFAM: NmrA family protein; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pna:Pnap_0622 NmrA family protein
YP_003050319.1	PFAM: helix-turn-helix HxlR type; KEGG: pna:Pnap_0621 HxlR family transcriptional regulator
YP_003050320.1	PFAM: Lytic transglycosylase catalytic; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rfr:Rfer_3765 lytic transglycosylase, catalytic
YP_003050321.1	KEGG: mfa:Mfla_2197 hypothetical protein
YP_003050322.1	PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2190 hypothetical protein
YP_003050323.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rpe:RPE_1228 iron-containing alcohol dehydrogenase
YP_003050324.1	PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2734 glycosyl transferase, group 1
YP_003050325.1	PFAM: Peptidase M23; KEGG: mfa:Mfla_2189 peptidase M23B
YP_003050326.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_003050327.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2187 rhodanese-like protein
YP_003050328.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: pne:Pnec_1651 glutaredoxin 3
YP_003050329.1	TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mfa:Mfla_2185 protein translocase subunit SecB
YP_003050330.1	PFAM: protein of unknown function DUF1058; KEGG: mfa:Mfla_2184 hypothetical protein
YP_003050331.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_2183 glycerol-3-phosphate dehydrogenase (NAD(P)+)
YP_003050332.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_2182 RNA methyltransferase TrmH, group 2
YP_003050335.1	PFAM: carbonic anhydrase; KEGG: mfa:Mfla_0800 carbonic anhydrase
YP_003050336.1	PFAM: sulphate transporter; Xanthine/uracil/vitamin C permease; KEGG: mfa:Mfla_0799 sulphate transporter
YP_003050337.1	KEGG: mfa:Mfla_2181 hypothetical protein
YP_003050338.1	KEGG: mfa:Mfla_2165 hypothetical protein
YP_003050339.1	KEGG: mfa:Mfla_2164 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003050340.1	KEGG: mfa:Mfla_2163 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III
YP_003050341.1	TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: mfa:Mfla_2162 BioH protein
YP_003050342.1	TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: mfa:Mfla_2161 biotin biosynthesis protein BioC
YP_003050343.1	TIGRFAM: dethiobiotin synthase; KEGG: mfa:Mfla_2160 dethiobiotin synthase
YP_003050345.1	KEGG: mfa:Mfla_2159 nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_003050346.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_003050347.1	KEGG: mfa:Mfla_2157 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta
YP_003050348.1	PFAM: Rare lipoprotein B; KEGG: mfa:Mfla_2156 rare lipoprotein B
YP_003050349.1	TIGRFAM: leucyl-tRNA synthetase; KEGG: mfa:Mfla_2155 leucyl-tRNA synthetase
YP_003050350.1	TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: mms:mma_2576 adenylate kinase
YP_003050351.1	KEGG: mfa:Mfla_2152 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase
YP_003050352.1	KEGG: mfa:Mfla_2151 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_003050353.1	PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_2150 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003050354.1	PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: mfa:Mfla_2149 organic solvent tolerance protein
YP_003050355.1	PFAM: aminoglycoside phosphotransferase; KEGG: mfa:Mfla_2148 aminoglycoside phosphotransferase
YP_003050356.1	PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_2147 nucleotidyl transferase
YP_003050357.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: mfa:Mfla_2146 aminopeptidase P
YP_003050358.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mfa:Mfla_2145 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
YP_003050359.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mfa:Mfla_2144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
YP_003050360.1	KEGG: mfa:Mfla_2143 putative thiol:disulphide interchange protein
YP_003050361.1	PFAM: type II secretion system protein; KEGG: mfa:Mfla_2142 type II secretion system protein
YP_003050362.1	TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_2141 type II secretion system protein E
YP_003050363.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mfa:Mfla_2140 cold-shock DNA-binding protein family protein
YP_003050364.1	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: mfa:Mfla_2139 isocitrate dehydrogenase (NADP)
YP_003050365.1	PFAM: pseudouridine synthase; KEGG: mfa:Mfla_2138 ribosomal large subunit pseudouridine synthase E
YP_003050366.1	PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0585 hypothetical protein
YP_003050367.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_003050368.1	PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: mfa:Mfla_2136 major facilitator transporter
YP_003050369.1	KEGG: mfa:Mfla_2135 hypothetical protein
YP_003050370.1	PFAM: protein of unknown function DUF198; KEGG: mfa:Mfla_2134 GTP cyclohydrolase
YP_003050371.1	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mfa:Mfla_2133 1-deoxy-D-xylulose-5-phosphate synthase
YP_003050372.1	PFAM: Polyprenyl synthetase; KEGG: mfa:Mfla_2132 farnesyl-diphosphate synthase
YP_003050373.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: mfa:Mfla_2131 exodeoxyribonuclease VII small subunit
YP_003050374.1	KEGG: tbd:Tbd_0552 hypothetical protein
YP_003050375.1	PFAM: phospholipase/Carboxylesterase; KEGG: mfa:Mfla_2130 carboxylesterase
YP_003050376.1	PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_2128 beta-lactamase-like protein
YP_003050377.1	PFAM: Fimbrial protein pilin; KEGG: aci:ACIAD3338 competence factor involved in DNA binding and uptake
YP_003050378.1	KEGG: mfa:Mfla_2125 MxaD gene product
YP_003050379.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mfa:Mfla_2124 YVTN beta-propeller repeat-containing protein
YP_003050380.1	hydrolyzes diadenosine polyphosphate
YP_003050381.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_003050382.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_003050383.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_003050384.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: mfa:Mfla_2119 acetolactate synthase, large subunit
YP_003050385.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_2118 type II secretion system protein E
YP_003050386.1	KEGG: reu:Reut_A2736 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_003050387.1	PFAM: Glutathione S-transferase domain; KEGG: mfa:Mfla_2116 glutathione S-transferase-like protein
YP_003050389.1	TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: mfa:Mfla_2115 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003050390.1	PFAM: NUDIX hydrolase; KEGG: mfa:Mfla_2114 NUDIX hydrolase
YP_003050391.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: afr:AFE_0054 integral membrane protein, MarC family
YP_003050392.1	TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: tgr:Tgr7_3290 DJ-1 family protein
YP_003050393.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mfa:Mfla_2113 maf protein
YP_003050394.1	KEGG: mfa:Mfla_2112 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein
YP_003050395.1	PFAM: protein of unknown function YGGT; KEGG: mfa:Mfla_2110 protein of unknown function YGGT
YP_003050396.1	KEGG: mfa:Mfla_2109 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_003050397.1	PFAM: alanine racemase domain protein; KEGG: mfa:Mfla_2108 hypothetical protein
YP_003050398.1	KEGG: mfa:Mfla_2107 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_003050399.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_2106 twitching motility protein
YP_003050400.1	PFAM: protein of unknown function DUF72; KEGG: pfo:Pfl01_5035 hypothetical protein
YP_003050401.1	TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: mfa:Mfla_2103 dihydroorotase
YP_003050402.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_003050403.1	PFAM: phosphoribosyltransferase; KEGG: mfa:Mfla_2101 phosphoribosyltransferase
YP_003050404.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_003050405.1	PFAM: protein of unknown function DUF179; KEGG: nmu:Nmul_A2478 hypothetical protein
YP_003050406.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mfa:Mfla_2098 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II
YP_003050407.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_003050408.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_2095 LolC/E family lipoprotein releasing system, transmembrane protein
YP_003050409.1	KEGG: mfa:Mfla_2094 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003050410.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: mfa:Mfla_2093 DNA internalization-related competence protein ComEC/Rec2
YP_003050411.1	PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: dds:Ddes_0156 glyceraldehyde-3-phosphate dehydrogenase, type I
YP_003050412.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_2092 MotA/TolQ/ExbB proton channel
YP_003050413.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_2091 biopolymer transport protein ExbD/TolR
YP_003050414.1	KEGG: mfa:Mfla_2090 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003050415.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_003050416.1	PFAM: protein of unknown function DUF343; KEGG: mfa:Mfla_2088 hypothetical protein
YP_003050417.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_003050418.1	KEGG: mfa:Mfla_1189 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003050420.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2086 cobyrinic acid a,c-diamide synthase
YP_003050421.1	KEGG: mfa:Mfla_2085 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A
YP_003050422.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: eba:ebA4496 magnesium Mg(2+)/cobalt Co(2+) transport protein
YP_003050423.1	TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dar:Daro_4128 cysteine synthase
YP_003050424.1	KEGG: mms:mma_2167 FimV type IV pilus assembly protein
YP_003050425.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: mfa:Mfla_2083 flavin reductase-like, FMN-binding
YP_003050426.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003050427.1	KEGG: mfa:Mfla_2081 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein
YP_003050428.1	TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: mfa:Mfla_2080 putative transcriptional acitvator, Baf
YP_003050429.1	PFAM: Sporulation domain protein; KEGG: mfa:Mfla_2079 hypothetical protein
YP_003050430.1	KEGG: xac:XAC2358 DnaK supressor
YP_003050431.1	KEGG: xcv:XCV3258 putative secreted protein
YP_003050432.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; biotin/lipoyl attachment domain-containing protein; KEGG: mfa:Mfla_2076 dihydrolipoamide dehydrogenase
YP_003050433.1	KEGG: mfa:Mfla_2075 dehydrogenase catalytic domain-containing protein; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein
YP_003050434.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_003050435.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mfa:Mfla_2073 leucyl aminopeptidase
YP_003050436.1	PFAM: regulatory protein Crp; SMART: regulatory protein Crp; KEGG: tgr:Tgr7_1360 putative transcriptional regulator, Crp/Fnr family
YP_003050437.1	PFAM: TrkA-N domain protein; KEGG: mfa:Mfla_2071 TrkA-N
YP_003050438.1	KEGG: aeh:Mlg_2527 hypothetical protein
YP_003050439.1	PFAM: adenylate cyclase; KEGG: mfa:Mfla_2069 adenylate cyclase
YP_003050440.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2068 putative partition-related protein
YP_003050441.1	PFAM: Phosphoglycerate mutase; KEGG: mfa:Mfla_2067 phosphohistidine phosphatase, SixA
YP_003050442.1	KEGG: mfa:Mfla_2066 hypothetical protein
YP_003050443.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mfa:Mfla_2065 exonuclease RecJ
YP_003050444.1	TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: mfa:Mfla_2064 triosephosphate isomerase
YP_003050445.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mfa:Mfla_2063 preprotein translocase subunit SecG
YP_003050446.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mfa:Mfla_2061 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_003050447.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_003050448.1	KEGG: mfa:Mfla_2059 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_003050449.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003050450.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mfa:Mfla_2057 NADH-quinone oxidoreductase, E subunit
YP_003050451.1	KEGG: mfa:Mfla_2056 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
YP_003050452.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003050453.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: mfa:Mfla_2054 respiratory-chain NADH dehydrogenase, subunit 1
YP_003050454.1	Catalyzes the transfer of electrons from NADH to quinone
YP_003050455.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mfa:Mfla_2052 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_003050456.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mfa:Mfla_2051 NADH-ubiquinone oxidoreductase, chain 4L
YP_003050457.1	KEGG: mfa:Mfla_2050 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein
YP_003050458.1	KEGG: mfa:Mfla_2049 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_003050459.1	TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mfa:Mfla_2048 proton-translocating NADH-quinone oxidoreductase, chain N
YP_003050460.1	KEGG: mfa:Mfla_2047 hypothetical protein
YP_003050462.1	PFAM: NUDIX hydrolase; KEGG: mfa:Mfla_2046 NUDIX hydrolase
YP_003050463.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mfa:Mfla_2045 NAD-dependent epimerase/dehydratase
YP_003050464.1	PFAM: Pyridoxal-dependent decarboxylase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: mfa:Mfla_2033 pyridoxal-dependent decarboxylase
YP_003050465.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: mfa:Mfla_2032 2OG-Fe(II) oxygenase
YP_003050466.1	KEGG: nmu:Nmul_A1081 hypothetical protein
YP_003050467.1	PFAM: Hemolysin-type calcium-binding region; KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4
YP_003050468.1	KEGG: mfa:Mfla_1780 hypothetical protein
YP_003050469.1	PFAM: phosphate-selective porin O and P; KEGG: mfa:Mfla_0157 hypothetical protein
YP_003050470.1	PFAM: Acetamidase/Formamidase; KEGG: mfa:Mfla_1777 formamidase
YP_003050471.1	TIGRFAM: regulatory protein, FmdB family; KEGG: mfa:Mfla_1776 glutamine amidotransferase, class-II
YP_003050472.1	TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: mfa:Mfla_1775 twin-arginine translocation pathway signal
YP_003050473.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mfa:Mfla_1774 inner-membrane translocator
YP_003050474.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mfa:Mfla_1773 inner-membrane translocator
YP_003050475.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mfa:Mfla_1772 ABC transporter related
YP_003050476.1	KEGG: mfa:Mfla_1771 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003050477.1	PFAM: Urease accessory protein UreD; KEGG: mfa:Mfla_1770 urease accessory protein UreD
YP_003050478.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
YP_003050479.1	KEGG: mfa:Mfla_1768 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit
YP_003050480.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_003050481.1	PFAM: UreE urease accessory domain protein; KEGG: mfa:Mfla_1766 UreE urease accessory-like protein
YP_003050482.1	PFAM: Urease accessory protein UreF; KEGG: mfa:Mfla_1765 urease accessory protein UreF
YP_003050483.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mfa:Mfla_1764 urease accessory protein UreG
YP_003050484.1	PFAM: HupE/UreJ protein; KEGG: mfa:Mfla_1763 HupE/UreJ protein
YP_003050485.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mfa:Mfla_1762 periplasmic sensor hybrid histidine kinase
YP_003050486.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1761 two component LuxR family transcriptional regulator
YP_003050487.1	PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo1256 putative serine/threonine protein kinase
YP_003050488.1	KEGG: pmy:Pmen_0467 hypothetical protein
YP_003050489.1	KEGG: mfa:Mfla_0979 hypothetical protein
YP_003050490.1	KEGG: mfa:Mfla_2600 hypothetical protein
YP_003050491.1	KEGG: pfl:PFL_2661 DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein
YP_003050492.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_003050493.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: mfa:Mfla_2002 translation initiation factor 3
YP_003050494.1	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: mfa:Mfla_2001 50S ribosomal protein L35P
YP_003050495.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_003050496.1	KEGG: mfa:Mfla_1999 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein
YP_003050497.1	KEGG: mfa:Mfla_1998 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit
YP_003050498.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_003050499.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mfa:Mfla_1996 MerR family transcriptional regulator
YP_003050500.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA
YP_003050501.1	PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: eba:ebA4984 hypothetical protein
YP_003050502.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mpt:Mpe_A2969 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB
YP_003050503.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: lhk:LHK_02975 probable MFS transporter
YP_003050504.1	KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein
YP_003050505.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0815 two component LuxR family transcriptional regulator
YP_003050507.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0815 two component LuxR family transcriptional regulator
YP_003050508.1	KEGG: mfa:Mfla_0817 signal transduction histidine kinase, glucose-6-phosphate specific; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003050509.1	KEGG: mfa:Mfla_2044 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003050510.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mfa:Mfla_2043 extracellular solute-binding protein
YP_003050511.1	PFAM: cytochrome c class I; KEGG: vei:Veis_1827 cytochrome c, class I
YP_003050512.1	PFAM: methanol dehydrogenase beta subunit; KEGG: mfa:Mfla_2041 methanol dehydrogenase, beta subunit
YP_003050513.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_2040 ATPase
YP_003050514.1	KEGG: mfa:Mfla_2039 hypothetical protein
YP_003050515.1	KEGG: mfa:Mfla_2038 hypothetical protein
YP_003050516.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mca:MCA1528 MxaC protein, putative
YP_003050517.1	KEGG: mca:MCA1529 MxaK protein, putative
YP_003050518.1	KEGG: mfa:Mfla_2035 MxaL protein, putative
YP_003050519.1	KEGG: rpc:RPC_1917 MxaD protein, putative
YP_003050520.1	KEGG: mms:mma_1453 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003050521.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1987 two component LuxR family transcriptional regulator
YP_003050522.1	KEGG: har:HEAR1864 hypothetical protein
YP_003050523.1	PFAM: flagellin domain protein; KEGG: mfa:Mfla_1986 flagellin-like protein
YP_003050524.1	PFAM: flagellar protein FlaG protein; KEGG: mfa:Mfla_1985 flagellar protein FlaG protein
YP_003050525.1	PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: mfa:Mfla_1984 flagellar hook-associated 2-like protein
YP_003050526.1	TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: mfa:Mfla_1983 flagellar protein FliS
YP_003050527.1	KEGG: har:HEAR1870 putative flagellar synthesis (flagellar regulon)
YP_003050528.1	KEGG: mfa:Mfla_1981 hypothetical protein
YP_003050529.1	KEGG: mfa:Mfla_1980 putative flagellar biosynthetic protein
YP_003050530.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_003050531.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: mfa:Mfla_1978 flagellar M-ring protein FliF
YP_003050532.1	TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: mfa:Mfla_1977 flagellar motor switch protein FliG
YP_003050533.1	PFAM: flagellar assembly protein FliH; KEGG: mfa:Mfla_1976 flagellar assembly protein FliH
YP_003050534.1	KEGG: mfa:Mfla_1975 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase
YP_003050535.1	TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: mfa:Mfla_1974 flagellar export FliJ
YP_003050536.1	PFAM: flagellar hook-length control protein; KEGG: mms:mma_1436 flagellar hook-length control protein
YP_003050537.1	interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_003050538.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_003050539.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mms:mma_1433 FliN flagellar motor switch/type III secretory pathway protein
YP_003050540.1	PFAM: flagellar biosynthesis protein FliO; KEGG: mfa:Mfla_1969 flagellar biosynthesis protein, FliO
YP_003050541.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_003050542.1	TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: mfa:Mfla_1967 flagellar biosynthetic protein FliQ
YP_003050543.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mfa:Mfla_1966 flagellar biosynthetic protein FliR
YP_003050544.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella
YP_003050545.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_003050546.1	KEGG: mfa:Mfla_1962 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2
YP_003050547.1	PFAM: flagellar P-ring protein; KEGG: mfa:Mfla_1961 flagellar basal body P-ring protein
YP_003050548.1	PFAM: flagellar L-ring protein; KEGG: mfa:Mfla_1960 flagellar L-ring protein
YP_003050549.1	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: nmu:Nmul_A1326 hypothetical protein
YP_003050550.1	TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: mfa:Mfla_1958 flagellar basal-body rod FlgF
YP_003050551.1	the hook connects flagellar basal body to the flagellar filament
YP_003050552.1	PFAM: flagellar hook capping protein; KEGG: mfa:Mfla_1956 flagellar hook capping protein
YP_003050553.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: mfa:Mfla_1955 flagellar basal-body rod protein FlgC
YP_003050554.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mfa:Mfla_1954 flagellar basal-body rod protein FlgB
YP_003050555.1	TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mfa:Mfla_1953 flageller protein FlgA
YP_003050556.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: mfa:Mfla_1952 anti-sigma-28 factor, FlgM
YP_003050557.1	PFAM: FlgN family protein; KEGG: mfa:Mfla_1951 FlgN
YP_003050558.1	PFAM: MgtC/SapB transporter; KEGG: nmu:Nmul_A1508 MgtC/SapB transporter
YP_003050559.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mca:MCA0041 Gfo/Idh/MocA family oxidoreductase
YP_003050560.1	PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1950 OmpA/MotB
YP_003050561.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1949 MotA/TolQ/ExbB proton channel
YP_003050562.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_003050563.1	KEGG: har:HEAR1313 MotR
YP_003050564.1	positive regulator of class III flagellar genes
YP_003050565.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: mfa:Mfla_1945 flagellar biosynthesis protein FlhA
YP_003050566.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mfa:Mfla_1944 flagellar biosynthetic protein FlhB
YP_003050568.1	with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems
YP_003050569.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
YP_003050570.1	KEGG: mfa:Mfla_1941 hypothetical protein
YP_003050571.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: azc:AZC_1333 TonB-dependent receptor
YP_003050572.1	PFAM: FecR protein; KEGG: neu:NE1218 putative FecR protein
YP_003050573.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bpt:Bpet4455 RNA polymerase sigma factor
YP_003050574.1	KEGG: bav:BAV2041 membrane protein
YP_003050575.1	PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE2432 hypothetical protein
YP_003050576.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: neu:NE2433 TonB-dependent receptor protein
YP_003050577.1	PFAM: FecR protein; KEGG: neu:NE1078 putative transmembrane sensor
YP_003050578.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_5893 ECF subfamily RNA polymerase sigma-24 factor
YP_003050579.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: xcb:XC_0558 ferric pseudobactin M114 receptor protein
YP_003050580.1	PFAM: FecR protein; KEGG: neu:NE1102 putative transmembrane sensor
YP_003050581.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xca:xccb100_0572 ECF-type sigma factor
YP_003050582.1	KEGG: mms:mma_2099 flagellar motor protein MotA
YP_003050583.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_003050584.1	KEGG: har:HEAR1299 hypothetical protein
YP_003050585.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1937 response regulator receiver domain-containing protein
YP_003050586.1	PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1936 CheA signal transduction histidine kinases
YP_003050587.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: geo:Geob_3695 CheW protein
YP_003050588.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pap:PSPA7_0256 chemotaxis transducer
YP_003050590.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: xcv:XCV3021 methyl-accepting chemotaxis protein
YP_003050591.1	KEGG: har:HEAR1303 glutamate methyltransferase, chemotactic response regulator; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type
YP_003050592.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
YP_003050593.1	KEGG: mfa:Mfla_1930 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver
YP_003050594.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1929 response regulator receiver domain-containing protein
YP_003050595.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: mfa:Mfla_1928 chemotaxis phosphatase, CheZ
YP_003050596.1	PFAM: Heavy metal transport/detoxification protein; KEGG: bph:Bphy_1968 heavy metal transport/detoxification protein
YP_003050597.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_003050598.1	KEGG: pae:PA3406 transport protein HasD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003050599.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3587 HlyD family type I secretion membrane fusion protein
YP_003050600.1	PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_1956 glycosyl transferase group 1
YP_003050601.1	KEGG: mfa:Mfla_1922 peptidase A2A
YP_003050602.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: mfa:Mfla_1921 phosphomannomutase
YP_003050603.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_003050604.1	TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: mfa:Mfla_1920 hypothetical protein
YP_003050605.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mfa:Mfla_1919 NADH:flavin oxidoreductase/NADH oxidase
YP_003050606.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region; KEGG: mfa:Mfla_1918 fumarase
YP_003050607.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_003050608.1	PFAM: ATP-cone domain protein; KEGG: mfa:Mfla_1916 transcriptional regulator NrdR
YP_003050609.1	KEGG: mfa:Mfla_1915 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_003050610.1	PFAM: TatD-related deoxyribonuclease; KEGG: mfa:Mfla_1914 TatD-related deoxyribonuclease
YP_003050611.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain-containing protein
YP_003050612.1	KEGG: mfa:Mfla_1333 hypothetical protein
YP_003050613.1	PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1334 methylation
YP_003050614.1	KEGG: mfa:Mfla_1335 methylation
YP_003050615.1	PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_1336 type II and III secretion system protein
YP_003050616.1	KEGG: mfa:Mfla_1337 hypothetical protein
YP_003050617.1	KEGG: mfa:Mfla_1338 putative transmembrane protein
YP_003050618.1	KEGG: mfa:Mfla_1339 hypothetical protein
YP_003050619.1	KEGG: mfa:Mfla_1340 hypothetical protein
YP_003050620.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_1341 type II secretion system protein E
YP_003050621.1	PFAM: type II secretion system protein; KEGG: mfa:Mfla_1342 type II secretion system protein
YP_003050622.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1343 general secretion pathway protein G
YP_003050623.1	KEGG: mfa:Mfla_1350 hypothetical protein
YP_003050624.1	KEGG: mfa:Mfla_1350 hypothetical protein
YP_003050625.1	KEGG: mfa:Mfla_1350 hypothetical protein
YP_003050626.1	KEGG: swp:swp_1383 hemolysin-type calcium-binding region
YP_003050627.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1351 TonB-dependent receptor
YP_003050628.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein
YP_003050629.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_003050630.1	PFAM: class II aldolase/adducin family protein; KEGG: rfr:Rfer_3750 L-fuculose-phosphate aldolase
YP_003050631.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: mfa:Mfla_1912 YjeF-related protein-like protein
YP_003050632.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_003050633.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_003050634.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_003050635.1	PFAM: Septum formation initiator; KEGG: mfa:Mfla_1908 cell division protein FtsB
YP_003050636.1	KEGG: mfa:Mfla_1907 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003050637.1	PFAM: Hemolysin-type calcium-binding region; KEGG: lch:Lcho_0632 Na-Ca exchanger/integrin-beta4
YP_003050638.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mfa:Mfla_1904 glycine cleavage T protein (aminomethyl transferase)
YP_003050639.1	KEGG: pfo:Pfl01_1359 hypothetical protein
YP_003050640.1	SMART: von Willebrand factor type A; KEGG: mfa:Mfla_1900 von Willebrand factor, type A
YP_003050641.1	KEGG: mfa:Mfla_1899 hypothetical protein
YP_003050642.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mfa:Mfla_1898 von Willebrand factor, type A
YP_003050643.1	KEGG: mfa:Mfla_1897 hypothetical protein
YP_003050644.1	KEGG: mfa:Mfla_1896 hypothetical protein
YP_003050645.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mfa:Mfla_1895 ATPase
YP_003050646.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_003050647.1	PFAM: Beta-ketoacyl synthase; KEGG: mfa:Mfla_1893 3-oxoacyl-[acyl-carrier-protein] synthase I
YP_003050648.1	PFAM: protein of unknown function DUF498; KEGG: mfa:Mfla_1046 hypothetical protein
YP_003050649.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_003050650.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_003050651.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_003050652.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_003050653.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: mfa:Mfla_1052 peptidase
YP_003050654.1	KEGG: mfa:Mfla_1054 hypothetical protein
YP_003050655.1	PFAM: 17 kDa surface antigen; KEGG: lhk:LHK_01946 hypothetical protein
YP_003050656.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated
YP_003050657.1	PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_1055 two component, sigma54 specific, fis family transcriptional regulator
YP_003050658.1	KEGG: mfa:Mfla_1056 hypothetical protein
YP_003050659.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_1057 periplasmic sensor signal transduction histidine kinase
YP_003050660.1	PFAM: dihydrofolate reductase region; KEGG: mfa:Mfla_1058 dihydrofolate reductase
YP_003050661.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU1547 TPR domain-containing protein
YP_003050662.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mfa:Mfla_1059 ornithine decarboxylase
YP_003050663.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mfa:Mfla_1230 cobalamin synthesis protein, P47K
YP_003050664.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mfa:Mfla_1231 cobalamin synthesis protein, P47K
YP_003050665.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mfa:Mfla_1232 TraR/DksA family transcriptional regulator
YP_003050667.1	PFAM: ribonuclease II; KEGG: mfa:Mfla_1234 ribonuclease II
YP_003050668.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_003050669.1	PFAM: putative RNA methylase; THUMP domain protein; KEGG: mfa:Mfla_1236 putative RNA methylase
YP_003050670.1	KEGG: mfa:Mfla_1237 hypothetical protein
YP_003050672.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_003050673.1	PFAM: Ankyrin; SMART: Ankyrin; KEGG: mfa:Mfla_1032 ankyrin
YP_003050674.1	KEGG: mpt:Mpe_A2428 putative cytochrome c
YP_003050675.1	PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_A3575 uncharacterized NAD(FAD)-dependent dehydrogenase
YP_003050676.1	KEGG: mfa:Mfla_1033 L-sorbosone dehydrogenase, putative
YP_003050677.1	KEGG: mfa:Mfla_1034 hypothetical protein
YP_003050678.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mfa:Mfla_1036 hypothetical protein
YP_003050679.1	KEGG: mfa:Mfla_1890 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003050680.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_003050681.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; KEGG: mfa:Mfla_1888 succinyl-CoA synthetase (ADP-forming) alpha subunit
YP_003050682.1	SMART: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin
YP_003050683.1	TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; ExsB family protein; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mfa:Mfla_1886 NH(3)-dependent NAD(+) synthetase
YP_003050684.1	PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_1885 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_003050685.1	PFAM: protein of unknown function DUF486; KEGG: net:Neut_0429 hypothetical protein
YP_003050686.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: mca:MCA1097 ferrous iron transport protein B
YP_003050687.1	PFAM: FeoA family protein; KEGG: mca:MCA1098 ferrous iron transport protein A
YP_003050688.1	PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: mfa:Mfla_1882 peptidase M61
YP_003050689.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_1881 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003050690.1	PFAM: BolA family protein; KEGG: mfa:Mfla_1880 transcriptional regulator BolA
YP_003050691.1	PFAM: YCII-related; KEGG: mfa:Mfla_1879 YCII-related
YP_003050692.1	TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mfa:Mfla_1878 intracellular septation protein A
YP_003050693.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mfa:Mfla_1877 PHP-like protein
YP_003050694.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: mfa:Mfla_1876 SUA5/YciO/YrdC/YwlC
YP_003050695.1	PFAM: peptidase M50; KEGG: mfa:Mfla_1875 peptidase M50
YP_003050696.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003050697.1	PFAM: small multidrug resistance protein; KEGG: bbr:BB3914 putative membrane transport protein
YP_003050698.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfa:Mfla_1874 condensin subunit ScpA
YP_003050699.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mfa:Mfla_1873 condensin subunit ScpB
YP_003050700.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_1872 ribosomal large subunit pseudouridine synthase B
YP_003050701.1	KEGG: gbm:Gbem_0113 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003050702.1	KEGG: dar:Daro_2951 hypothetical protein
YP_003050703.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dar:Daro_2952 TonB-dependent receptor
YP_003050704.1	involved in methylation of ribosomal protein L3
YP_003050705.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_003050706.1	PFAM: arsenate reductase and related; KEGG: mfa:Mfla_1868 hypothetical protein
YP_003050707.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_003050708.1	PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1865 peptidase M48, Ste24p
YP_003050709.1	PFAM: K potassium transporter; KEGG: dar:Daro_0485 K+ potassium transporter
YP_003050710.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1203 hypothetical protein
YP_003050711.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_003050712.1	PFAM: Disulphide bond formation protein DsbB; KEGG: mfa:Mfla_1862 disulphide bond formation protein DsbB
YP_003050713.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_003050714.1	KEGG: mfa:Mfla_1860 hypothetical protein
YP_003050715.1	KEGG: mfa:Mfla_1854 hypothetical protein
YP_003050716.1	KEGG: mfa:Mfla_1853 hypothetical protein
YP_003050717.1	KEGG: mfa:Mfla_1852 hypothetical protein
YP_003050719.1	KEGG: azo:azo0662 hypothetical protein
YP_003050720.1	PFAM: NMT1/THI5 like domain protein; KEGG: mfa:Mfla_1859 ABC transport system substrate-binding protein
YP_003050721.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1858 binding-protein-dependent transport systems inner membrane component
YP_003050722.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1857 ABC transporter related
YP_003050723.1	PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase
YP_003050724.1	TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mfa:Mfla_1856 L-glutamine synthetase
YP_003050725.1	PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; KEGG: mfa:Mfla_1855 CopG family transcriptional regulator
YP_003050726.1	TIGRFAM: urea carboxylase-associated protein 2; KEGG: pna:Pnap_0038 hypothetical protein
YP_003050727.1	TIGRFAM: urea carboxylase-associated protein 1; KEGG: pna:Pnap_0037 hypothetical protein
YP_003050728.1	KEGG: dar:Daro_0074 allophanate hydrolase subunit 2; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1
YP_003050729.1	KEGG: eba:ebA2214 hypothetical protein
YP_003050730.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_0020 ethanolamine transproter
YP_003050731.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: tau:Tola_1536 ethanolamine ammonia-lyase
YP_003050732.1	PFAM: Ethanolamine ammonia-lyase light chain; KEGG: azo:azo3830 putative ethanolamine ammonia-lyase small subunit
YP_003050733.1	PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rme:Rmet_1823 heat shock protein DnaJ-like protein
YP_003050734.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_003050735.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2757 AraC family transcriptional regulator
YP_003050736.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_003050737.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xop:PXO_01975 acetyltransferase
YP_003050738.1	PFAM: isochorismatase hydrolase; KEGG: bid:Bind_1386 isochorismatase hydrolase
YP_003050739.1	PFAM: extracellular solute-binding protein family 5; KEGG: mfa:Mfla_1850 extracellular solute-binding protein
YP_003050740.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mfa:Mfla_1849 ErfK/YbiS/YcfS/YnhG
YP_003050741.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1848 binding-protein-dependent transport systems inner membrane component
YP_003050742.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1847 binding-protein-dependent transport systems inner membrane component
YP_003050743.1	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: mfa:Mfla_1846 hypothetical protein
YP_003050744.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_003050745.1	PFAM: protein of unknown function UPF0005; KEGG: mfa:Mfla_1843 hypothetical protein
YP_003050746.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mfa:Mfla_1840 tRNA-adenosine deaminase
YP_003050747.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: mfa:Mfla_1839 transglutaminase-like protein
YP_003050748.1	PFAM: protein of unknown function DUF58; KEGG: mfa:Mfla_1838 hypothetical protein
YP_003050749.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mfa:Mfla_1837 ATPase
YP_003050750.1	KEGG: mfa:Mfla_1836 hypothetical protein
YP_003050751.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_1835 LysR family transcriptional regulator
YP_003050752.1	PFAM: Pirin domain protein; KEGG: mfa:Mfla_1833 pirin-like protein
YP_003050753.1	KEGG: mfa:Mfla_1832 NADPH-dependent FMN reductase
YP_003050754.1	PFAM: YceI family protein; KEGG: mfa:Mfla_1831 YceI
YP_003050755.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mfa:Mfla_1830 NADH:flavin oxidoreductase/NADH oxidase
YP_003050756.1	PFAM: nitroreductase; KEGG: mfa:Mfla_1829 nitroreductase
YP_003050757.1	PFAM: Thioredoxin domain; KEGG: mfa:Mfla_1828 thioredoxin-related
YP_003050758.1	KEGG: mfa:Mfla_1827 hypothetical protein
YP_003050759.1	PFAM: Peptidase M23; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1826 peptidase M23B
YP_003050760.1	KEGG: mfa:Mfla_1825 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_003050761.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_003050762.1	KEGG: tbd:Tbd_1980 hypothetical protein
YP_003050763.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mca:MCA0309 hypothetical protein
YP_003050764.1	TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: mfa:Mfla_1823 flavodoxin/nitric oxide synthase
YP_003050765.1	PFAM: protein of unknown function DUF88; KEGG: mfa:Mfla_1822 hypothetical protein
YP_003050766.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_003050767.1	PFAM: Calcium-binding EF-hand-containing protein
YP_003050768.1	KEGG: noc:Noc_0226 PAS sensor diguanylate cyclase and phophodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003050769.1	PFAM: peptidase S24 and S26 domain protein; KEGG: neu:NE0318 hypothetical protein
YP_003050770.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_003050771.1	KEGG: mfa:Mfla_1816 hypothetical protein
YP_003050772.1	KEGG: cco:CCC13826_2027 pTet43
YP_003050773.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1808 hypothetical protein
YP_003050774.1	PFAM: protein of unknown function DUF519; KEGG: mfa:Mfla_1807 hypothetical protein
YP_003050775.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: ent:Ent638_1801 superoxide dismutase
YP_003050776.1	KEGG: mlo:mll5457 acid shock protein
YP_003050777.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mfa:Mfla_1806 cation diffusion facilitator family transporter
YP_003050778.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: mfa:Mfla_1805 4-oxalocrotonate tautomerase
YP_003050779.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_003050780.1	KEGG: mfa:Mfla_1803 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003050781.1	PFAM: PsiF repeat protein; KEGG: mfa:Mfla_2601 PsiF
YP_003050782.1	KEGG: azo:azo0646 toxin secretion ABC transporter permease and ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase
YP_003050783.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3201 type I secretion membrane fusion protein, HlyD
YP_003050784.1	PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: azo:azo0648 LuxR family transcriptional regulator
YP_003050785.1	KEGG: pfo:Pfl01_1463 VCBS; TIGRFAM: outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Hemolysin-type calcium-binding region; SMART: von Willebrand factor type A
YP_003050786.1	KEGG: cja:CJA_1397 hypothetical protein
YP_003050787.1	PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: eba:ebA1787 hypothetical protein
YP_003050788.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: eba:ebA1785 hypothetical protein
YP_003050789.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dar:Daro_0706 type I secretion outer membrane protein, TolC
YP_003050791.1	KEGG: similar to cryptochrome dash; TIGRFAM: cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein
YP_003050792.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: cvi:CV_3229 hypothetical protein
YP_003050793.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: xac:XAC3202 GIY-YIG nuclease superfamily protein
YP_003050794.1	KEGG: oan:Oant_4301 hypothetical protein
YP_003050795.1	PFAM: protein of unknown function DUF1555; KEGG: lch:Lcho_2324 hypothetical protein
YP_003050796.1	PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: mca:MCA2187 alkaline phosphatase family protein
YP_003050797.1	KEGG: mca:MCA2188 hypothetical protein
YP_003050798.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: nmu:Nmul_A2590 general secretion pathway protein G
YP_003050799.1	PFAM: type II secretion system protein; KEGG: tbd:Tbd_1294 type II secretion system protein F
YP_003050800.1	PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein
YP_003050801.1	KEGG: avn:Avin_29140 hypothetical protein
YP_003050802.1	KEGG: ppg:PputGB1_2456 hypothetical protein
YP_003050803.1	KEGG: net:Neut_0511 putative transmembrane protein
YP_003050804.1	KEGG: mfa:Mfla_2415 putative prolin-rich transmembrane protein
YP_003050805.1	PFAM: type II and III secretion system protein; NolW domain protein; KEGG: mfa:Mfla_2414 type II and III secretion system protein
YP_003050806.1	KEGG: mfa:Mfla_2413 methylation
YP_003050807.1	PFAM: type II secretion system protein G; KEGG: mfa:Mfla_2412 methylation
YP_003050808.1	KEGG: mfa:Mfla_2411 hypothetical protein
YP_003050809.1	PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2410 lytic transglycosylase, catalytic
YP_003050810.1	KEGG: mfa:Mfla_2375 hypothetical protein
YP_003050811.1	KEGG: smt:Smal_2462 hypothetical protein
YP_003050812.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1186 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003050813.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1625 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003050814.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mpt:Mpe_A2526 CHR transporter
YP_003050815.1	KEGG: mfa:Mfla_0366 hypothetical protein
YP_003050816.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1203 hypothetical protein
YP_003050817.1	KEGG: transmembrane protein
YP_003050819.1	PFAM: Domain of unknown function DUF1840; KEGG: mfa:Mfla_1227 hypothetical protein
YP_003050820.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1260 TPR repeat-containing protein
YP_003050821.1	KEGG: mfa:Mfla_1228 hypothetical protein
YP_003050822.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: azo:azo0607 putative TonB-dependent receptor
YP_003050823.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: xca:xccb100_1388 putative hydroxylase
YP_003050824.1	KEGG: rso:RSc2353 signal peptide protein
YP_003050825.1	PFAM: cytochrome B561; KEGG: rso:RSc2354 putative transmembrane hydrogenase cytochrome b-type subunit
YP_003050826.1	PFAM: PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_B0220 hypothetical protein
YP_003050827.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nmu:Nmul_A1260 TonB-dependent siderophore receptor
YP_003050828.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1199 ABC transporter related
YP_003050829.1	PFAM: AsmA family protein; KEGG: mfa:Mfla_1200 AsmA
YP_003050830.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bmn:BMA10247_0371 DNA-binding response regulator KdpE
YP_003050831.1	PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cvi:CV_1596 two-component regulatory protein sensor kinase
YP_003050832.1	KEGG: bvi:Bcep1808_2371 potassium-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit
YP_003050833.1	TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cvi:CV_1598 potassium-transporting ATPase B chain
YP_003050834.1	KEGG: cvi:CV_1599 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit
YP_003050836.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1201 major facilitator transporter
YP_003050837.1	PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_1202 ATP-dependent DNA helicase Rep
YP_003050838.1	KEGG: maq:Maqu_3846 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003050839.1	PFAM: MEKHLA domain protein; KEGG: bpr:GBP346_A2162 mekhla domain protein
YP_003050840.1	KEGG: tau:Tola_1998 diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; SMART: GGDEF domain containing protein
YP_003050841.1	PFAM: GTP-binding protein HSR1-related; KEGG: mfa:Mfla_1204 GTP-binding
YP_003050842.1	KEGG: tbd:Tbd_0707 transmembrane protein
YP_003050843.1	PFAM: ApbE family lipoprotein; KEGG: rso:RSc0611 thiamine biosynthesis lipoprotein ApbE precursor transmembrane
YP_003050844.1	PFAM: FMN-binding domain protein; KEGG: tbd:Tbd_0709 putative signal peptide protein
YP_003050845.1	KEGG: pnu:Pnuc_0361 hypothetical protein
YP_003050846.1	KEGG: mfa:Mfla_1208 hypothetical protein
YP_003050847.1	PFAM: ribonuclease BN; KEGG: mfa:Mfla_1209 ribonuclease BN
YP_003050848.1	KEGG: azo:azo2559 hypothetical protein
YP_003050849.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: aav:Aave_1953 alpha-2-macroglobulin domain-containing protein
YP_003050850.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bph:Bphy_0941 penicillin-binding protein 1C
YP_003050851.1	KEGG: mfa:Mfla_1212 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; AAA ATPase
YP_003050852.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2581 MarR family transcriptional regulator
YP_003050853.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_2582 RND efflux system, outer membrane lipoprotein, NodT
YP_003050854.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: mfa:Mfla_2583 fusaric acid resistance protein region
YP_003050855.1	PFAM: protein of unknown function DUF1656; KEGG: mfa:Mfla_2584 hypothetical protein
YP_003050856.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_2585 secretion protein HlyD
YP_003050857.1	KEGG: mms:mma_1285 hypothetical protein
YP_003050858.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B4244 LysR family transcriptional regulator
YP_003050859.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_003050860.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ppd:Ppro_1339 hypothetical protein
YP_003050861.1	KEGG: tbd:Tbd_1976 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit domain protein
YP_003050862.1	PFAM: ribonucleotide reductase; KEGG: tbd:Tbd_1975 ribonucleotide-diphosphate reductase subunit beta
YP_003050863.1	KEGG: afr:AFE_0683 type I restriction-modification system, R subunit; PFAM: EcoEI R domain protein; protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase
YP_003050864.1	PFAM: N-6 DNA methylase; KEGG: afr:AFE_0684 type I restriction-modification system, M subunit
YP_003050865.1	PFAM: restriction modification system DNA specificity domain; KEGG: bpt:Bpet3989 type I restriction-modification system, S subunit
YP_003050866.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_003050867.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_003050868.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_003050869.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mfa:Mfla_1063 6-phosphogluconolactonase
YP_003050870.1	KEGG: bra:BRADO4440 putative 3-demethylubiquinone-9 3-O-methyltransferase
YP_003050871.1	PFAM: protein of unknown function DUF59; KEGG: mfa:Mfla_1064 hypothetical protein
YP_003050872.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_003050873.1	KEGG: mfa:Mfla_1066 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003050874.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_003050875.1	KEGG: mfa:Mfla_1068 tetratricopeptide repeat protein
YP_003050876.1	KEGG: mfa:Mfla_1069 hypothetical protein
YP_003050877.1	KEGG: mfa:Mfla_1070 integration host factor, beta subunit; TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_003050878.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_003050879.1	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: mfa:Mfla_1072 cytidylate kinase
YP_003050880.1	KEGG: sse:Ssed_4479 hypothetical protein
YP_003050881.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_003050882.1	PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_1074 prephenate dehydrogenase
YP_003050883.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_003050884.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_003050885.1	KEGG: dar:Daro_3990 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein
YP_003050886.1	KEGG: vvy:VV2671 GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; SMART: GGDEF domain containing protein
YP_003050887.1	KEGG: vvu:VV1_1734 small-conductance mechanosensitive channel
YP_003050888.1	PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator
YP_003050889.1	PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll1328 hypothetical protein
YP_003050890.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pca:Pcar_0428 OMPP1/FadL/TodX family toluene transport protein
YP_003050891.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mfa:Mfla_1083 radical SAM family protein
YP_003050892.1	PFAM: GumN family protein; KEGG: mfa:Mfla_1084 hypothetical protein
YP_003050893.1	KEGG: har:HEAR3387 hypothetical protein
YP_003050894.1	PFAM: small multidrug resistance protein; KEGG: smt:Smal_3713 small multidrug resistance protein
YP_003050895.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1088 response regulator receiver domain-containing protein
YP_003050896.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator
YP_003050897.1	PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: bpt:Bpet4722 bacterioferritin
YP_003050898.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: mfa:Mfla_1090 hypothetical protein
YP_003050899.1	PFAM: protein of unknown function DUF1328; KEGG: bpy:Bphyt_2658 protein of unknown function DUF1328
YP_003050900.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1092 periplasmic sensor signal transduction histidine kinase
YP_003050901.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated
YP_003050902.1	PFAM: transport-associated; KEGG: mfa:Mfla_1094 transport-associated
YP_003050904.1	PFAM: transport-associated; KEGG: nmu:Nmul_A1193 transport-associated protein
YP_003050906.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_1094 transport-associated
YP_003050907.1	PFAM: Lipocalin family protein; KEGG: mfa:Mfla_1095 lipocalin-like protein
YP_003050908.1	PFAM: protein of unknown function DUF188; KEGG: mfa:Mfla_1096 hypothetical protein
YP_003050909.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1098 DEAD/DEAH box helicase-like protein
YP_003050910.1	PFAM: pseudouridine synthase; KEGG: mfa:Mfla_1099 ribosomal small subunit pseudouridine synthase A
YP_003050911.1	KEGG: mfa:Mfla_1100 hypothetical protein
YP_003050912.1	KEGG: mfa:Mfla_1106 ribose-5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_003050913.1	with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase
YP_003050914.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: mfa:Mfla_1105 dihydroxyacetone kinase, subunit L
YP_003050915.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_1107 tRNA/rRNA methyltransferase (SpoU)
YP_003050916.1	KEGG: mpt:Mpe_A1383 hypothetical protein
YP_003050917.1	PFAM: Hsp33 protein; KEGG: mfa:Mfla_1108 HSP33 protein
YP_003050918.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
YP_003050919.1	KEGG: mfa:Mfla_1110 hypothetical protein
YP_003050920.1	KEGG: mfa:Mfla_1112 hypothetical protein
YP_003050921.1	PFAM: protein of unknown function DUF344; KEGG: mfa:Mfla_1113 polyphosphate:AMP phosphotransferase
YP_003050922.1	KEGG: pfs:PFLU2975 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type
YP_003050923.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: net:Neut_2264 transcriptional regulator, ArsR family protein
YP_003050924.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mca:MCA2265 hypothetical protein
YP_003050925.1	PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: net:Neut_2262 protein tyrosine phosphatase
YP_003050926.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmj:BMULJ_00925 ACR3 family arsenite transporter
YP_003050927.1	PFAM: Rh family protein/ammonium transporter; KEGG: tbd:Tbd_1701 putative ammonium transporter
YP_003050928.1	KEGG: mfa:Mfla_0717 hypothetical protein
YP_003050930.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_0331 RND family efflux transporter MFP subunit
YP_003050931.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: psb:Psyr_2865 hydrophobe/amphiphile efflux-1 HAE1
YP_003050932.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: azo:azo0246 outer membrane efflux protein
YP_003050933.1	PFAM: protein of unknown function DUF1275; KEGG: rso:RSc0238 putative permease transmembrane protein
YP_003050934.1	KEGG: elf:LF82_3563 uncharacterized protein YneG
YP_003050935.1	PFAM: ATP-binding region ATPase domain protein; Diverse 7TM receptor extracellular region 2; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_2537 periplasmic sensor signal transduction histidine kinase
YP_003050936.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_2538 two component transcriptional regulator
YP_003050937.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: mms:mma_0520 autotransporter
YP_003050938.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: ece:Z1947 DNA polymerase V subunit UmuC
YP_003050939.1	PFAM: peptidase S24 and S26 domain protein; KEGG: lpc:LPC_1133 SOS (error prone) mutagenesis protein UmuD (RumA)
YP_003050940.1	PFAM: methyladenine glycosylase; KEGG: xcv:XCV2171 DNA-3-methyladenine glycosylase I
YP_003050941.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: glo:Glov_1735 methyl-accepting chemotaxis sensory transducer
YP_003050942.1	KEGG: ppr:PBPRB0840 hypothetical protein
YP_003050943.1	KEGG: mfa:Mfla_0711 hypothetical protein
YP_003050944.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: mfa:Mfla_0714 protein of unknown function DUF861, cupin_3
YP_003050945.1	KEGG: mfa:Mfla_2628 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003050946.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: tbd:Tbd_2596 long chain fatty acid transport protein
YP_003050947.1	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
YP_003050948.1	KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003050949.1	PFAM: protein of unknown function DUF779; KEGG: mfa:Mfla_1994 hypothetical protein
YP_003050950.1	PFAM: Aldehyde Dehydrogenase; KEGG: mfa:Mfla_1995 lactaldehyde dehydrogenase
YP_003050951.1	catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor
YP_003050952.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mfa:Mfla_0721 NADH dehydrogenase (quinone)
YP_003050953.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: mfa:Mfla_0720 formate dehydrogenase, alpha subunit
YP_003050954.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mfa:Mfla_0719 formate dehydrogenase family accessory protein FdhD
YP_003050955.1	KEGG: rme:Rmet_0557 formate dehydrogenase delta subunit
YP_003050956.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mfa:Mfla_1116 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003050957.1	KEGG: mfa:Mfla_1117 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_003050958.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: neu:NE0345 acriflavin resistance protein:heavy metal efflux pump CzcA
YP_003050959.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_1177 secretion protein HlyD
YP_003050960.1	PFAM: outer membrane efflux protein; KEGG: dar:Daro_1877 outer membrane efflux protein
YP_003050961.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mms:mma_1938 lactoylglutathione lyase
YP_003050962.1	PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: mfa:Mfla_1118 Smr protein/MutS2
YP_003050963.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mfa:Mfla_1119 thioredoxin reductase
YP_003050964.1	PFAM: Ferritin Dps family protein; KEGG: mfa:Mfla_1120 ferritin and Dps
YP_003050965.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mfa:Mfla_1124 DNA translocase FtsK
YP_003050966.1	TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mfa:Mfla_1125 outer membrane lipoprotein carrier protein LolA
YP_003050967.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1128 recombination factor protein RarA
YP_003050968.1	KEGG: mfa:Mfla_1129 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_003050969.1	PFAM: sodium/hydrogen exchanger; KEGG: mfa:Mfla_1130 sodium/hydrogen exchanger
YP_003050970.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_003050971.1	KEGG: cbc:CbuK_0320 transcriptional regulator
YP_003050972.1	KEGG: avi:Avi_5530 hypothetical protein
YP_003050973.1	PFAM: Beta-ketoacyl synthase; KEGG: pna:Pnap_2672 beta-ketoacyl synthase
YP_003050974.1	PFAM: phosphopantetheine-binding; KEGG: oan:Oant_2371 phosphopantetheine-binding
YP_003050975.1	PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_1648 putative esterase
YP_003050976.1	PFAM: aminotransferase class-III; KEGG: pfs:PFLU1128 putative aminotransferase
YP_003050977.1	TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: aav:Aave_4326 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_003050978.1	KEGG: mfa:Mfla_1187 hypothetical protein
YP_003050979.1	PFAM: electron transport protein SCO1/SenC; KEGG: har:HEAR2909 SCO1/Sen family protein
YP_003050980.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_003050981.1	PFAM: cytochrome oxidase assembly; KEGG: eba:ebA4236 putative cytochrome aa3 oxidase assembly protein,related to CtaA
YP_003050982.1	KEGG: dar:Daro_1464 transmembrane protein
YP_003050983.1	KEGG: dar:Daro_1465 surfeit locus 1
YP_003050984.1	KEGG: nmu:Nmul_A0188 putative transmembrane protein
YP_003050985.1	PFAM: cytochrome c oxidase subunit III; KEGG: dar:Daro_1467 cytochrome c oxidase, subunit III
YP_003050986.1	PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dar:Daro_1468 cytochrome c oxidase assembly protein
YP_003050988.1	KEGG: dar:Daro_1470 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_003050989.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; KEGG: dar:Daro_1471 cytochrome c oxidase, subunit II:cytochrome c, class I:cytochrome c oxidase subunit II, transmembrane region
YP_003050990.1	KEGG: noc:Noc_3048 hypothetical protein
YP_003050991.1	PFAM: protein of unknown function DUF1282; KEGG: azo:azo1485 hypothetical protein
YP_003050992.1	PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1168 hypothetical protein
YP_003050993.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1167 ABC transporter related
YP_003050994.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_1166 secretion protein HlyD
YP_003050995.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dar:Daro_1165 outer membrane efflux protein
YP_003050996.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1135 ABC transporter related
YP_003050997.1	PFAM: nitroreductase; KEGG: mfa:Mfla_1136 nitroreductase
YP_003050998.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_1137 GreA/GreB family elongation factor
YP_003050999.1	TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: pol:Bpro_2441 bifunctional GMP synthase/glutamine amidotransferase protein
YP_003051000.1	KEGG: mfa:Mfla_1141 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein
YP_003051001.1	KEGG: mfa:Mfla_1142 hypothetical protein
YP_003051002.1	PFAM: protein of unknown function UPF0125; KEGG: tbd:Tbd_1754 hypothetical protein
YP_003051003.1	PFAM: cyclase/dehydrase; KEGG: mfa:Mfla_1144 cyclase/dehydrase
YP_003051004.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_003051005.1	KEGG: gbm:Gbem_2545 hypothetical protein
YP_003051006.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfa:Mfla_1760 CheW protein
YP_003051007.1	PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_1759 radical SAM family protein
YP_003051008.1	KEGG: mfa:Mfla_1758 uracil-DNA glycosylase
YP_003051009.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_003051010.1	KEGG: mfa:Mfla_1754 hypothetical protein
YP_003051011.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_1753 GreA/GreB family elongation factor
YP_003051012.1	KEGG: mfa:Mfla_1752 DNA helicase/exodeoxyribonuclease V, subunit B
YP_003051013.1	PFAM: UvrD/REP helicase; KEGG: mfa:Mfla_1751 DNA helicase/exodeoxyribonuclease V, subunit A
YP_003051014.1	PFAM: SNARE associated Golgi protein; KEGG: mfa:Mfla_1749 hypothetical protein
YP_003051015.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1750 hypothetical protein
YP_003051016.1	PFAM: Hemolysin-type calcium-binding region; WD40 domain protein beta Propeller; KEGG: rec:RHECIAT_CH0000808 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
YP_003051017.1	KEGG: mfa:Mfla_1748 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein
YP_003051018.1	KEGG: mfa:Mfla_1747 hypothetical protein
YP_003051019.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mfa:Mfla_1746 microcin-processing peptidase 2
YP_003051020.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mfa:Mfla_1745 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_003051021.1	KEGG: mfa:Mfla_1744 hypothetical protein
YP_003051022.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1743 ABC transporter related
YP_003051023.1	KEGG: mfa:Mfla_1742 hypothetical protein
YP_003051024.1	PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: dar:Daro_0703 calcium-binding EF-hand
YP_003051025.1	KEGG: rso:RS05425 lipoprotein signal peptide
YP_003051026.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dar:Daro_0704 response regulator receiver:transcriptional regulatory protein, C-terminal
YP_003051027.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0715 periplasmic sensor signal transduction histidine kinase
YP_003051028.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cti:RALTA_B1922 putative cyclic nucleotide-binding regulatory protein
YP_003051029.1	KEGG: mfa:Mfla_1317 hypothetical protein
YP_003051030.1	KEGG: lhk:LHK_00181 YcgR
YP_003051031.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: abu:Abu_2318 sulfatase
YP_003051032.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_4935 AraC family transcriptional regulator
YP_003051033.1	PFAM: protein of unknown function DUF1486; KEGG: bam:Bamb_4311 hypothetical protein
YP_003051034.1	PFAM: aminotransferase class I and II; KEGG: mfa:Mfla_1319 aminotransferase
YP_003051035.1	PFAM: TPR repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A3396 trypsin-like serine protease
YP_003051036.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_003051037.1	KEGG: mfa:Mfla_1321 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein
YP_003051038.1	KEGG: mfa:Mfla_1322 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003051039.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1323 HAD family hydrolase
YP_003051040.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: azo:azo1616 ferredoxin protein
YP_003051041.1	PFAM: peptidase S49; KEGG: mfa:Mfla_1324 peptidase S49
YP_003051042.1	PFAM: phosphoglucose isomerase (PGI); KEGG: mfa:Mfla_1325 glucose-6-phosphate isomerase
YP_003051043.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_003051044.1	TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_1368 glucose-1-phosphate adenylyltransferase
YP_003051045.1	PFAM: glycoside hydrolase family 57; KEGG: mfa:Mfla_1369 glycoside hydrolase family protein
YP_003051046.1	PFAM: Domain of unknown function DUF1926; Domain of unknown function DUF1925; glycoside hydrolase family 57; KEGG: mfa:Mfla_1370 4-alpha-glucanotransferase
YP_003051047.1	PFAM: ROK family protein; KEGG: mfa:Mfla_1371 glucokinase
YP_003051048.1	PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: har:HEAR1023 hypothetical protein
YP_003051049.1	KEGG: mex:Mext_3815 hypothetical protein
YP_003051050.1	PFAM: glycosyl transferase family 2; glycoside hydrolase family 17; KEGG: mfa:Mfla_1372 glycosyl transferase family protein
YP_003051051.1	KEGG: mfa:Mfla_1373 putative beta (1-6) glucan synthase
YP_003051052.1	KEGG: mfa:Mfla_1374 hypothetical protein
YP_003051053.1	PFAM: YdjC family protein; KEGG: mfa:Mfla_1375 hypothetical protein
YP_003051054.1	PFAM: glycosyl transferase family 2; KEGG: mfa:Mfla_1377 glycosyl transferase family protein
YP_003051055.1	KEGG: mfa:Mfla_1378 hypothetical protein
YP_003051056.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: mfa:Mfla_1379 4Fe-4S cluster binding
YP_003051057.1	PFAM: protein of unknown function UPF0079; KEGG: mfa:Mfla_1380 hypothetical protein
YP_003051058.1	KEGG: mfa:Mfla_1381 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_003051059.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mfa:Mfla_1382 beta-lactamase-like protein
YP_003051060.1	KEGG: mfa:Mfla_1383 hypothetical protein
YP_003051061.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1384 DNA mismatch repair protein MutL
YP_003051062.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rfr:Rfer_2470 phosphomethylpyrimidine kinase
YP_003051063.1	KEGG: mfa:Mfla_1385 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_003051064.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
YP_003051065.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: tbd:Tbd_1222 integral membrane protein, DUF6
YP_003051066.1	PFAM: intradiol ring-cleavage dioxygenase; KEGG: noc:Noc_2416 intradiol ring-cleavage dioxygenase
YP_003051067.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_1387 twitching motility protein
YP_003051068.1	KEGG: mfa:Mfla_1388 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003051069.1	PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1389 TPR repeat-containing protein
YP_003051070.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: mfa:Mfla_1390 hypothetical protein
YP_003051071.1	PFAM: Methyltransferase type 12; KEGG: mfa:Mfla_1394 methyltransferase type 12
YP_003051072.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pmy:Pmen_1066 cyclopropane-fatty-acyl-phospholipid synthase
YP_003051073.1	PFAM: protein of unknown function DUF1365; KEGG: xac:XAC1376 hypothetical protein
YP_003051074.1	PFAM: FAD dependent oxidoreductase; KEGG: pfs:PFLU0747 putatite oxidoreductase
YP_003051075.1	PFAM: fatty acid desaturase; KEGG: xcv:XCV1434 fatty-acid desaturase
YP_003051076.1	PFAM: Lipocalin family protein; KEGG: ppd:Ppro_0126 lipocalin family protein
YP_003051077.1	KEGG: aav:Aave_3567 hypothetical protein
YP_003051078.1	PFAM: protein of unknown function DUF1295; KEGG: aav:Aave_3566 hypothetical protein
YP_003051079.1	KEGG: ppd:Ppro_0125 hypothetical protein
YP_003051080.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_3565 cyclopropane-fatty-acyl-phospholipid synthase
YP_003051081.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: aeh:Mlg_2255 MerR family transcriptional regulator
YP_003051082.1	KEGG: mpt:Mpe_A3548 hypothetical protein
YP_003051083.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: reu:Reut_A0697 sigma-70 region 2:sigma-70 region 4
YP_003051084.1	PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: msl:Msil_2867 pyrrolo-quinoline quinone
YP_003051085.1	KEGG: mfa:Mfla_1397 putative phospholipase
YP_003051086.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1750 hypothetical protein
YP_003051087.1	KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase
YP_003051088.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_003051089.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: mfa:Mfla_1401 condensin subunit Smc
YP_003051090.1	SMART: ZipA FtsZ-binding region; KEGG: mfa:Mfla_1402 ZipA-like protein
YP_003051091.1	KEGG: dar:Daro_1734 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; helix-hairpin-helix motif; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1
YP_003051092.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: mfa:Mfla_1404 3'(2'),5'-bisphosphate nucleotidase
YP_003051093.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1405 TPR repeat-containing protein
YP_003051094.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_003051095.1	PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: cvi:CV_0790 putative sulfite oxidase subunit YedZ
YP_003051096.1	PFAM: DoxX family protein; KEGG: ppg:PputGB1_2006 DoxX family protein
YP_003051097.1	PFAM: Conserved TM helix repeat-containing protein; KEGG: mfa:Mfla_1406 TM helix protein
YP_003051098.1	PFAM: protein of unknown function UPF0060; KEGG: psa:PST_2099 putative inner membrane lipoprotein
YP_003051099.1	PFAM: cation efflux protein; KEGG: pmy:Pmen_1162 cation diffusion facilitator family transporter
YP_003051100.1	KEGG: mfa:Mfla_1420 hypothetical protein
YP_003051101.1	KEGG: mfa:Mfla_1421 phospholipase D/transphosphatidylase; PFAM: SNARE associated Golgi protein; phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase
YP_003051102.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_1422 endonuclease/exonuclease/phosphatase
YP_003051103.1	SMART: Calcium-binding EF-hand-containing protein; KEGG: sme:SMc01489 putative signal peptide protein
YP_003051104.1	KEGG: bpt:Bpet1645 putative secreted protein
YP_003051105.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: abc:ACICU_01280 threonine dehydrogenase
YP_003051106.1	PFAM: dihydrodipicolinate synthetase; KEGG: plu:plu1530 hypothetical protein
YP_003051108.1	KEGG: mfa:Mfla_1465 hypothetical protein
YP_003051111.1	KEGG: mfa:Mfla_1456 hypothetical protein
YP_003051115.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0106 short chain dehydrogenase
YP_003051116.1	PFAM: regulatory protein TetR; KEGG: rfr:Rfer_0303 TetR family transcriptional regulator
YP_003051117.1	PFAM: protein of unknown function DUF326; KEGG: ses:SARI_01721 hypothetical protein
YP_003051118.1	KEGG: mfa:Mfla_0673 hypothetical protein
YP_003051119.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_1426 short-chain dehydrogenase/reductase SDR
YP_003051120.1	PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator
YP_003051121.1	KEGG: nmu:Nmul_A1283 hypothetical protein
YP_003051122.1	PFAM: protein of unknown function DUF1345; KEGG: mms:mma_2076 hypothetical protein
YP_003051123.1	PFAM: YceI family protein; KEGG: mfa:Mfla_1355 YceI
YP_003051124.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tbd:Tbd_2379 putative succinylglutamate desuccinylase
YP_003051125.1	TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1082 heavy metal translocating P-type ATPase
YP_003051126.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: tbd:Tbd_0679 cold-shock DNA-binding protein family protein
YP_003051127.1	PFAM: CsbD family protein; KEGG: mfa:Mfla_2651 CsbD-like protein
YP_003051128.1	KEGG: eba:ebA3357 hypothetical protein
YP_003051129.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: mfa:Mfla_0159 LuxR family transcriptional regulator
YP_003051131.1	PFAM: Na+/solute symporter; KEGG: bvi:Bcep1808_6789 Na+/solute symporter
YP_003051132.1	KEGG: bph:Bphy_6133 hypothetical protein
YP_003051134.1	KEGG: bph:Bphy_6133 hypothetical protein
YP_003051135.1	PFAM: Peptidase M23; KEGG: ypp:YPDSF_1499 hypothetical protein
YP_003051136.1	TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_B2108 two domain protein: VgrG and COG4253
YP_003051137.1	PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_1089 two component LuxR family transcriptional regulator
YP_003051138.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: saz:Sama_0663 ferredoxin--NADP reductase
YP_003051139.1	KEGG: afw:Anae109_3189 hypothetical protein
YP_003051140.1	KEGG: msl:Msil_2642 hypothetical protein
YP_003051141.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: avn:Avin_11040 cytochrome bd ubiquinol oxidase, subunit II
YP_003051142.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ara:Arad_12230 cytochrome bd-type quinol oxidase subunit 1
YP_003051143.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bac:BamMC406_4296 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_003051144.1	PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pmy:Pmen_2198 2Fe-2S iron-sulfur cluster binding domain-containing protein
YP_003051145.1	KEGG: tmz:Tmz1t_0201 hypothetical protein
YP_003051146.1	PFAM: protein of unknown function DUF182; KEGG: har:HEAR1181 hypothetical protein
YP_003051147.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: har:HEAR1178 transcriptional regulator
YP_003051148.1	KEGG: mfa:Mfla_1486 hypothetical protein
YP_003051149.1	PFAM: beta-lactamase domain protein; KEGG: lhk:LHK_02694 probable hydrolase protein
YP_003051150.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mfa:Mfla_1497 TatD-related deoxyribonuclease
YP_003051151.1	PFAM: type IV pilus assembly PilZ; KEGG: mfa:Mfla_1498 type IV pilus assembly PilZ
YP_003051152.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mfa:Mfla_1499 DNA polymerase III, delta prime subunit
YP_003051153.1	KEGG: mfa:Mfla_1500 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase
YP_003051154.1	PFAM: aminodeoxychorismate lyase; KEGG: mfa:Mfla_1501 aminodeoxychorismate lyase
YP_003051155.1	TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; KEGG: mfa:Mfla_1502 aminodeoxychorismate lyase apoprotein
YP_003051156.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: mfa:Mfla_1503 3-oxoacyl-[acyl-carrier-protein] synthase II
YP_003051157.1	carries the fatty acid chain in fatty acid biosynthesis
YP_003051158.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_1505 3-oxoacyl-[acyl-carrier-protein] reductase
YP_003051159.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mfa:Mfla_1506 [acyl-carrier-protein] S-malonyltransferase
YP_003051160.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_003051161.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_003051162.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_003051163.1	PFAM: protein of unknown function DUF177; KEGG: mfa:Mfla_1510 hypothetical protein
YP_003051164.1	biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate
YP_003051165.1	catalyzes the formation of oxaloacetate from pyruvate
YP_003051166.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mfa:Mfla_1513 maf protein
YP_003051167.1	KEGG: mfa:Mfla_1514 hypothetical protein
YP_003051168.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_1515 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_003051169.1	PFAM: ribonuclease HII/HIII; KEGG: mfa:Mfla_1516 RNase HII
YP_003051170.1	KEGG: mfa:Mfla_1517 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19
YP_003051171.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mfa:Mfla_1518 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_003051172.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_003051173.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_003051174.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: mfa:Mfla_1521 outer membrane chaperone Skp (OmpH)
YP_003051175.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mfa:Mfla_1522 surface antigen (D15)
YP_003051176.1	KEGG: mfa:Mfla_1523 peptidase M50, putative membrane-associated zinc metallopeptidase; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein
YP_003051177.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_003051178.1	PFAM: phosphatidate cytidylyltransferase; KEGG: mfa:Mfla_1525 phosphatidate cytidylyltransferase
YP_003051179.1	KEGG: mfa:Mfla_1526 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_003051180.1	TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: mfa:Mfla_1527 ribosome recycling factor
YP_003051181.1	Catalyzes the phosphorylation of UMP to UDP
YP_003051182.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_003051183.1	TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: mfa:Mfla_1530 SSU ribosomal protein S2P
YP_003051184.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_003051185.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_003051186.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: mfa:Mfla_0008 DNA-directed DNA polymerase
YP_003051187.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_2669 short-chain dehydrogenase/reductase SDR
YP_003051188.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: mfa:Mfla_1533 protein of unknown function DUF861, cupin_3
YP_003051189.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_003051190.1	Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides
YP_003051191.1	KEGG: mfa:Mfla_1468 squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase
YP_003051192.1	KEGG: mfa:Mfla_1469 squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase
YP_003051193.1	TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mfa:Mfla_1470 amine oxidase
YP_003051194.1	PFAM: membrane protein of unknown function; KEGG: mfa:Mfla_1471 membrane protein of unknown function
YP_003051195.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A2342 short-chain dehydrogenase/reductase SDR
YP_003051196.1	KEGG: mfa:Mfla_1797 hypothetical protein
YP_003051197.1	KEGG: dar:Daro_0912 hypothetical protein
YP_003051198.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tmz:Tmz1t_1603 haloacid dehalogenase domain protein hydrolase
YP_003051199.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_003051200.1	KEGG: mfa:Mfla_1331 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_003051201.1	KEGG: mfa:Mfla_1330 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_003051202.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class V; KEGG: har:HEAR1919 cystathionine beta-lyase, PLP-dependent (beta-cystathionase)
YP_003051203.1	TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: mfa:Mfla_1329 50S ribosomal protein L9P
YP_003051204.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_003051205.1	PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_1327 single-strand binding protein/primosomal replication protein N
YP_003051206.1	TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: mfa:Mfla_1326 SSU ribosomal protein S6P
YP_003051207.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: mms:mma_1141 phosphoenolpyruvate carboxylase
YP_003051208.1	PFAM: protein of unknown function DUF1504; KEGG: lch:Lcho_2148 hypothetical protein
YP_003051209.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: mfa:Mfla_1472 glycogen/starch synthases, ADP-glucose type
YP_003051210.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_003051211.1	PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1474 STE24 endopeptidase
YP_003051212.1	KEGG: tbd:Tbd_1840 hypothetical protein
YP_003051213.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_003051214.1	PFAM: histone deacetylase superfamily; KEGG: mfa:Mfla_1476 histone deacetylase superfamily protein
YP_003051215.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mfa:Mfla_1477 6-pyruvoyl tetrahydrobiopterin synthase
YP_003051216.1	KEGG: mfa:Mfla_2011 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; NAD-dependent epimerase/dehydratase
YP_003051217.1	KEGG: hypothetical protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_003051218.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_2009 glucose-1-phosphate thymidylyltransferase
YP_003051219.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_2008 dTDP-glucose 4,6-dehydratase
YP_003051220.1	KEGG: mfa:Mfla_1478 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_003051221.1	PFAM: ribonuclease H; KEGG: mfa:Mfla_1479 RNase HI
YP_003051222.1	KEGG: mfa:Mfla_1480 methyltransferase type 11
YP_003051223.1	KEGG: mfa:Mfla_1481 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_003051224.1	PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1482 lytic transglycosylase, catalytic
YP_003051225.1	PFAM: extracellular solute-binding protein family 5; KEGG: mfa:Mfla_1483 extracellular solute-binding protein
YP_003051226.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1484 binding-protein-dependent transport systems inner membrane component
YP_003051227.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1485 binding-protein-dependent transport systems inner membrane component
YP_003051228.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azo:azo1569 enoyl-acyl carrier protein reductase
YP_003051229.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mfa:Mfla_1413 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003051230.1	PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_1412 histone-like DNA-binding protein
YP_003051231.1	KEGG: mfa:Mfla_1411 Lon-A peptidase; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase
YP_003051232.1	binds and unfolds substrates as part of the ClpXP protease
YP_003051233.1	KEGG: mfa:Mfla_1409 ATP-dependent Clp protease proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_003051234.1	TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: mfa:Mfla_1408 trigger factor
YP_003051235.1	PFAM: integrase family protein; KEGG: ppu:PP_2297 integrative genetic element Ppu40, integrase
YP_003051236.1	KEGG: bav:BAV0432 hypothetical protein
YP_003051237.1	KEGG: dar:Daro_0790 hypothetical protein
YP_003051238.1	PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family
YP_003051239.1	PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase
YP_003051240.1	KEGG: dar:Daro_0790 hypothetical protein
YP_003051241.1	KEGG: ecg:E2348C_2745 hypothetical protein
YP_003051242.1	PFAM: protein of unknown function DUF1376; KEGG: ecy:ECSE_1413 hypothetical protein
YP_003051244.1	KEGG: bvi:Bcep1808_7535 hypothetical protein
YP_003051245.1	PFAM: BRO domain protein; KEGG: bpm:BURPS1710b_1644 BRO domain-containing protein
YP_003051246.1	KEGG: AGAP012727-PA
YP_003051247.1	KEGG: pfo:Pfl01_3616 hypothetical protein
YP_003051248.1	PFAM: Resolvase domain; KEGG: dar:Daro_3652 resolvase, N-terminal
YP_003051250.1	PFAM: Domain of unknown function DUF1828; KEGG: eba:ebA7089 hypothetical protein
YP_003051251.1	KEGG: msl:Msil_1547 hypothetical protein
YP_003051254.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase
YP_003051255.1	PFAM: peptidase S24 and S26 domain protein; KEGG: eba:p2A243 DNA repair protein
YP_003051256.1	KEGG: mfa:Mfla_1629 hypothetical protein
YP_003051257.1	PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1630 outer membrane efflux protein
YP_003051258.1	KEGG: mfa:Mfla_1631 hypothetical protein
YP_003051259.1	PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_1632 acriflavin resistance protein
YP_003051260.1	KEGG: cja:CJA_2460 EAL domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003051261.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mfa:Mfla_1646 pterin-4-alpha-carbinolamine dehydratase
YP_003051262.1	PFAM: aspartate/glutamate/uridylate kinase; KEGG: mfa:Mfla_1647 aspartate/glutamate/uridylate kinase
YP_003051263.1	KEGG: mfa:Mfla_1648 aminodeoxychorismate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_003051264.1	TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: mfa:Mfla_1649 S-layer protein, putative
YP_003051265.1	PFAM: protein of unknown function DUF201; KEGG: mfa:Mfla_1650 hypothetical protein
YP_003051266.1	PFAM: histidine biosynthesis protein; KEGG: mfa:Mfla_1651 histidine biosynthesis
YP_003051267.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2543 formaldehyde-activating enzyme
YP_003051268.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_1652 formaldehyde-activating enzyme
YP_003051269.1	PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_1653 hexulose-6-phosphate isomerase
YP_003051271.1	KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_003051272.1	PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mfa:Mfla_1656 triphosphoribosyl-dephospho-CoA protein
YP_003051273.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: mfa:Mfla_1657 SSU ribosomal protein S6P modification protein
YP_003051274.1	catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin
YP_003051275.1	PFAM: protein of unknown function DUF201; KEGG: mfa:Mfla_1659 hypothetical protein
YP_003051276.1	PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mfa:Mfla_1660 methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative
YP_003051277.1	TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase domain protein; GHMP kinase; KEGG: mfa:Mfla_1661 beta-ribofuranosylaminobenzene 5'-phosphate synthase
YP_003051278.1	KEGG: mfa:Mfla_1662 formylmethanofuran dehydrogenase, subunit B
YP_003051279.1	TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mfa:Mfla_1663 formylmethanofuran dehydrogenase, subunit A
YP_003051280.1	catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin
YP_003051281.1	KEGG: mfa:Mfla_1665 formylmethanofuran dehydrogenase, subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein
YP_003051282.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: mfa:Mfla_1666 OmpA/MotB
YP_003051283.1	PFAM: protein of unknown function UPF0029; KEGG: mfa:Mfla_1667 hypothetical protein
YP_003051284.1	KEGG: rpi:Rpic_0247 putative proline-rich transmembrane protein
YP_003051285.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mfa:Mfla_1668 protein of unknown function DUF853, NPT hydrolase putative
YP_003051286.1	PFAM: protein of unknown function DUF302; KEGG: tcx:Tcr_0450 hypothetical protein
YP_003051287.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_1669 transcriptional regulator CysB-like protein
YP_003051288.1	PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_1670 hypothetical protein
YP_003051289.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mfa:Mfla_1671 nitrite and sulphite reductase 4Fe-4S region
YP_003051290.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1672 hypothetical protein
YP_003051291.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_003051292.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_003051293.1	KEGG: mfa:Mfla_1674 sulfate adenylyltransferase subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_003051294.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mfa:Mfla_1675 4Fe-4S ferredoxin, iron-sulfur binding
YP_003051295.1	KEGG: mfa:Mfla_1097 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein
YP_003051296.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1677 Bcr/CflA subfamily drug resistance transporter
YP_003051297.1	KEGG: mfa:Mfla_1680 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003051298.1	PFAM: coenzyme PQQ synthesis D; KEGG: mfa:Mfla_1681 coenzyme PQQ synthesis D
YP_003051299.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_003051300.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_003051301.1	TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A
YP_003051302.1	KEGG: nmu:Nmul_A2194 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_003051303.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_003051304.1	KEGG: mfa:Mfla_1685 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003051305.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: mfa:Mfla_1686 chorismate mutase / prephenate dehydratase
YP_003051306.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_003051307.1	negatively supercoils closed circular double-stranded DNA
YP_003051308.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_1689 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003051309.1	KEGG: bpe:BP2560 hypothetical protein
YP_003051310.1	KEGG: mfa:Mfla_1690 hypothetical protein
YP_003051311.1	catalyzes the conversion of O-succinylhomoserine into homocysteine
YP_003051312.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_003051313.1	PFAM: Colicin V production protein; KEGG: mfa:Mfla_1693 colicin V production protein
YP_003051314.1	PFAM: Sporulation domain protein; KEGG: mfa:Mfla_1694 sporulation related
YP_003051315.1	TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mfa:Mfla_1695 FolC bifunctional protein
YP_003051316.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mfa:Mfla_1696 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
YP_003051317.1	KEGG: mfa:Mfla_1697 tryptophan synthase, alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain
YP_003051318.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_003051319.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mfa:Mfla_1699 phosphoribosylanthranilate isomerase
YP_003051320.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_003051321.1	PFAM: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_1701 hypothetical protein
YP_003051322.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_003051323.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_003051324.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_003051325.1	PFAM: Entericidin EcnAB; KEGG: neu:NE0686 hypothetical protein
YP_003051326.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_003051327.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_003051328.1	PFAM: DinB family protein; KEGG: mms:mma_1103 hypothetical protein
YP_003051329.1	PFAM: protein of unknown function DUF1255; KEGG: mfa:Mfla_1707 hypothetical protein
YP_003051330.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_003051331.1	KEGG: pnu:Pnuc_0581 hypothetical protein
YP_003051332.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_003051333.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mfa:Mfla_1710 acetylornithine aminotransferase
YP_003051334.1	KEGG: tbd:Tbd_1852 hypothetical protein
YP_003051336.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_1711 Rieske (2Fe-2S) region
YP_003051337.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_1712 hypothetical protein
YP_003051338.1	KEGG: mfa:Mfla_1713 hypothetical protein
YP_003051339.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_1714 two component LuxR family transcriptional regulator
YP_003051340.1	KEGG: mfa:Mfla_1715 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: PAS domain containing protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; PAC repeat-containing protein
YP_003051341.1	KEGG: mfa:Mfla_0664 hypothetical protein
YP_003051344.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2942 methyl-accepting chemotaxis sensory transducer
YP_003051346.1	PFAM: HPP family protein; KEGG: pmy:Pmen_2162 HPP family protein+B94
YP_003051347.1	PFAM: Integral membrane protein TerC; KEGG: mfa:Mfla_2105 integral membrane protein TerC
YP_003051348.1	PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: mfa:Mfla_1726 glutamate-ammonia-ligase adenylyltransferase
YP_003051349.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_003051350.1	KEGG: neu:NE0537 hypothetical protein
YP_003051351.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: neu:NE1097 TonB-dependent receptor protein
YP_003051352.1	PFAM: FecR protein; KEGG: mms:mma_1234 Fe2+-dicitrate sensor, membrane component
YP_003051353.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: psa:PST_4176 probable sigma-70 factor, ECF subfamily
YP_003051354.1	PFAM: protein of unknown function DUF442; KEGG: mfa:Mfla_1728 hypothetical protein
YP_003051355.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: reu:Reut_A0234 ArsR family transcriptional regulator
YP_003051356.1	PFAM: beta-lactamase domain protein; KEGG: noc:Noc_2007 metallo-beta-lactamase family protein
YP_003051357.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_003051358.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: mfa:Mfla_1734 Crp/FNR family transcriptional regulator
YP_003051359.1	KEGG: mfa:Mfla_1735 hypothetical protein
YP_003051360.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1736 response regulator receiver domain-containing protein
YP_003051361.1	PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; KEGG: pap:PSPA7_0975 putative bacteriophytochrome
YP_003051362.1	PFAM: Haem oxygenase-like; KEGG: aav:Aave_2977 heme oxygenase
YP_003051363.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bpy:Bphyt_1049 alpha/beta hydrolase fold-3 domain protein
YP_003051367.1	KEGG: bph:Bphy_2091 hypothetical protein
YP_003051368.1	KEGG: mfa:Mfla_1723 L-sorbosone dehydrogenase
YP_003051369.1	KEGG: rfr:Rfer_1093 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein
YP_003051370.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mfa:Mfla_0336 GntR family transcriptional regulator
YP_003051371.1	KEGG: mfa:Mfla_0337 hypothetical protein
YP_003051372.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mfa:Mfla_0338 oxidoreductase alpha (molybdopterin) subunit
YP_003051373.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_003051374.1	PFAM: glutathione peroxidase; KEGG: cvi:CV_1107 glutathione peroxidase
YP_003051375.1	PFAM: acyltransferase 3; KEGG: vsa:VSAL_p54_03 acyltransferase
YP_003051376.1	PFAM: protein of unknown function DUF159; KEGG: rfr:Rfer_4344 hypothetical protein
YP_003051378.1	PFAM: peptidase S24 and S26 domain protein; KEGG: rfr:Rfer_4342 putative prophage repressor
YP_003051379.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein
YP_003051381.1	KEGG: xfa:XF2502 hypothetical protein
YP_003051382.1	KEGG: xfm:Xfasm12_1311 hypothetical protein
YP_003051383.1	PFAM: Lytic transglycosylase catalytic; KEGG: vpa:VP0901 hypothetical protein
YP_003051387.1	KEGG: ecg:E2348C_0829 predicted variable tail fibre protein
YP_003051388.1	KEGG: bpy:Bphyt_1182 hypothetical protein
YP_003051389.1	KEGG: bpy:Bphyt_1181 hypothetical protein
YP_003051390.1	TIGRFAM: phage tape measure protein; KEGG: dac:Daci_4084 lambda family phage tail tape measure protein
YP_003051392.1	KEGG: bra:BRADO3638 hypothetical protein
YP_003051393.1	KEGG: dac:Daci_3246 hypothetical protein
YP_003051394.1	KEGG: sit:TM1040_0810 hypothetical protein
YP_003051395.1	KEGG: bpe:BP3373 hypothetical protein
YP_003051396.1	KEGG: xau:Xaut_3712 hypothetical protein
YP_003051397.1	KEGG: dac:Daci_3242 hypothetical protein
YP_003051398.1	KEGG: ppf:Pput_3376 hypothetical protein
YP_003051399.1	KEGG: pmr:PMI0500 phage protein
YP_003051400.1	KEGG: cps:CPS_1624 hypothetical protein
YP_003051402.1	TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: sit:TM1040_0803 phage putative head morphogenesis protein, SPP1 gp7
YP_003051403.1	KEGG: psb:Psyr_2793 hypothetical protein
YP_003051404.1	PFAM: protein of unknown function DUF264; KEGG: bpe:BP3384 putative phage terminase
YP_003051405.1	KEGG: bpe:BP3385 hypothetical protein
YP_003051407.1	KEGG: reu:Reut_A2385 hypothetical protein
YP_003051408.1	KEGG: hch:HCH_10019 hypothetical protein
YP_003051410.1	PFAM: endodeoxyribonuclease RusA; KEGG: rpi:Rpic_2324 endodeoxyribonuclease RusA
YP_003051416.1	KEGG: mms:mma_2208 hypothetical protein
YP_003051417.1	KEGG: bpt:Bpet0969 hypothetical protein
YP_003051423.1	KEGG: pmr:PMI2424 phage regulatory protein
YP_003051424.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; SMART: helix-turn-helix domain protein; KEGG: aav:Aave_1686 putative phage repressor
YP_003051432.1	KEGG: lhk:LHK_01791 RecB
YP_003051433.1	KEGG: bgl:bglu_1g20910 hypothetical protein
YP_003051434.1	KEGG: psb:Psyr_2821 hypothetical protein
YP_003051435.1	KEGG: rpi:Rpic_2346 hypothetical protein
YP_003051436.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: aav:Aave_1746 DNA methylase N-4/N-6 domain-containing protein
YP_003051437.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: ppg:PputGB1_3461 C-5 cytosine-specific DNA methylase
YP_003051439.1	PFAM: protein of unknown function DUF1643; KEGG: smd:Smed_1928 hypothetical protein
YP_003051440.1	PFAM: heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_A3108 DnaJ-class molecular chaperone
YP_003051442.1	KEGG: bgl:bglu_1g20800 hypothetical protein
YP_003051444.1	PFAM: Prophage CP4-57 regulatory; KEGG: reu:Reut_A2372 prophage CP4-57 regulatory
YP_003051445.1	PFAM: integrase family protein; KEGG: bvi:Bcep1808_0425 phage integrase family protein
YP_003051446.1	KEGG: mfa:Mfla_1571 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_003051447.1	KEGG: mfa:Mfla_1572 DNA polymerase III, tau subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_003051448.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_1573 hypothetical protein
YP_003051449.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_003051450.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_1575 phosphoglycolate phosphatase
YP_003051451.1	TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; NodS family protein; methyltransferase small; UbiE/COQ5 methyltransferase; thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: mfa:Mfla_1576 3-demethylubiquinone-9 3-methyltransferase
YP_003051452.1	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline
YP_003051453.1	PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1578 OmpA/MotB
YP_003051454.1	PFAM: protein of unknown function DUF556; KEGG: mfa:Mfla_1579 hypothetical protein
YP_003051455.1	PFAM: protein of unknown function DUF447; KEGG: mfa:Mfla_1580 hypothetical protein
YP_003051456.1	PFAM: dihydropteroate synthase DHPS; KEGG: mfa:Mfla_1581 dihydropteroate synthase, DhpS
YP_003051457.1	PFAM: flavoprotein; KEGG: mfa:Mfla_1582 flavoprotein
YP_003051458.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_003051459.1	TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); KEGG: mfa:Mfla_1584 tRNA synthetase, class II (G, H, P and S)
YP_003051460.1	KEGG: mfa:Mfla_1585 hypothetical protein
YP_003051461.1	KEGG: mfa:Mfla_1586 HflC protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein
YP_003051462.1	KEGG: mfa:Mfla_1587 HflK protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein
YP_003051463.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mfa:Mfla_1588 small GTP-binding protein domain-containing protein
YP_003051464.1	Stimulates the elongation of poly(A) tails
YP_003051465.1	TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mfa:Mfla_1590 glutamyl-tRNA synthetase
YP_003051466.1	KEGG: tbd:Tbd_0552 hypothetical protein
YP_003051467.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1591 RND efflux system, outer membrane lipoprotein, NodT
YP_003051468.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_1592 hydrophobe/amphiphile efflux-1 HAE1
YP_003051469.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nmu:Nmul_A0692 secretion protein HlyD
YP_003051470.1	PFAM: regulatory protein TetR; KEGG: nmu:Nmul_A0693 TetR family transcriptional regulator
YP_003051471.1	KEGG: mms:mma_2307 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003051472.1	KEGG: mfa:Mfla_1595 hypothetical protein
YP_003051473.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_003051474.1	KEGG: rso:RSc1630 hypothetical protein
YP_003051475.1	PFAM: zinc/iron permease; KEGG: mfa:Mfla_1597 zinc/iron permease
YP_003051476.1	KEGG: mfa:Mfla_1600 hypothetical protein
YP_003051477.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1601 hypothetical protein
YP_003051478.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mfa:Mfla_1599 TonB-dependent receptor, plug
YP_003051479.1	PFAM: protein of unknown function DUF152; KEGG: mfa:Mfla_1611 hypothetical protein
YP_003051480.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: mfa:Mfla_1612 ribosomal large subunit pseudouridine synthase D
YP_003051481.1	TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: mfa:Mfla_1613 putative competence lipoprotein precursor
YP_003051482.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_003051483.1	KEGG: mfa:Mfla_1615 pyrrolo-quinoline quinone; TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003051484.1	KEGG: mfa:Mfla_1616 hypothetical protein
YP_003051485.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1617 ABC transporter related
YP_003051486.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1618 ABC transporter related
YP_003051487.1	KEGG: mfa:Mfla_1619 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_003051488.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_003051489.1	KEGG: mfa:Mfla_1621 hypothetical protein
YP_003051490.1	KEGG: mfa:Mfla_1622 tetratricopeptide TPR_2; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein
YP_003051491.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_1623 hypothetical protein
YP_003051492.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_003051493.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mfa:Mfla_1625 RNA methyltransferase TrmH, group 3
YP_003051494.1	KEGG: mfa:Mfla_1626 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; RNA binding S1 domain protein
YP_003051495.1	PFAM: phosphoribosyltransferase; KEGG: mfa:Mfla_1280 phosphoribosyltransferase
YP_003051496.1	PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_1278 polysaccharide biosynthesis protein CapD
YP_003051497.1	KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_003051498.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_1267 short-chain dehydrogenase/reductase SDR
YP_003051499.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mfa:Mfla_1266 radical SAM family protein
YP_003051500.1	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_1265 RNA-binding S4
YP_003051501.1	KEGG: mfa:Mfla_1264 ATP-dependent protease-like protein
YP_003051502.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mfa:Mfla_1263 molybdopterin synthase subunit MoaE
YP_003051503.1	TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: mfa:Mfla_1262 molybdopterin synthase subunit MoaD
YP_003051505.1	PFAM: protein of unknown function DUF195; KEGG: mfa:Mfla_1261 hypothetical protein
YP_003051506.1	PFAM: CHASE2 domain protein; KEGG: sse:Ssed_3621 putative adenylate/guanylate cyclase
YP_003051507.1	PFAM: SH3 type 3 domain protein; KEGG: tbd:Tbd_0981 hypothetical protein
YP_003051508.1	PFAM: peptidase M48 Ste24p; KEGG: tbd:Tbd_0982 TPR repeat-containing Zn-dependent protease
YP_003051509.1	TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: mfa:Mfla_1259 GTP-binding protein TypA
YP_003051510.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1258 DEAD/DEAH box helicase-like protein
YP_003051511.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfa:Mfla_1257 DEAD/DEAH box helicase-like protein
YP_003051512.1	PFAM: globin; KEGG: mfa:Mfla_1256 globin
YP_003051513.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_003051514.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_1254 two component, sigma54 specific, fis family transcriptional regulator
YP_003051515.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1253 TonB-dependent receptor
YP_003051516.1	PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_1252 hypothetical protein
YP_003051517.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1251 ABC transporter related
YP_003051518.1	PFAM: lipolytic protein G-D-S-L family; KEGG: mfa:Mfla_1250 arylesterase
YP_003051519.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: mfa:Mfla_1249 tRNA(Ile)-lysidine synthetase-like protein
YP_003051520.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_003051521.1	KEGG: mfa:Mfla_1247 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_003051522.1	PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: dar:Daro_3895 response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt
YP_003051523.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: mfa:Mfla_1245 methyl-accepting chemotaxis sensory transducer
YP_003051524.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfa:Mfla_1244 CheW protein
YP_003051525.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1243 response regulator receiver domain-containing protein
YP_003051526.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1242 response regulator receiver protein
YP_003051527.1	PFAM: domain of unknown function DUF1745; KEGG: mfa:Mfla_1241 hypothetical protein
YP_003051528.1	PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mfa:Mfla_1240 thiol peroxidase (atypical 2-Cys peroxiredoxin)
YP_003051529.1	KEGG: mfa:Mfla_1024 hypothetical protein
YP_003051530.1	KEGG: mfa:Mfla_1023 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003051531.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1022 biopolymer transport protein ExbD/TolR
YP_003051532.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1021 MotA/TolQ/ExbB proton channel
YP_003051533.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_1020 TonB-like protein
YP_003051534.1	KEGG: mfa:Mfla_1019 hypothetical protein
YP_003051535.1	KEGG: rpc:RPC_1970 hypothetical protein
YP_003051536.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_003051537.1	KEGG: neu:NE2142 hypothetical protein
YP_003051538.1	PFAM: protein of unknown function DUF1555; KEGG: avn:Avin_45680 alkaline phosphatase
YP_003051539.1	molecular chaperone
YP_003051540.1	PFAM: regulatory protein TetR; KEGG: msl:Msil_3427 transcriptional regulator, TetR family
YP_003051541.1	PFAM: Luciferase-like monooxygenase; KEGG: bpy:Bphyt_2100 putative xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family
YP_003051542.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rme:Rmet_0776 major facilitator superfamily MFS_1
YP_003051543.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1016 TonB-dependent receptor
YP_003051544.1	KEGG: mfa:Mfla_1015 hypothetical protein
YP_003051545.1	KEGG: lch:Lcho_1251 hypothetical protein
YP_003051546.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mfa:Mfla_1014 UBA/ThiF-type NAD/FAD binding fold
YP_003051547.1	KEGG: mfa:Mfla_1013 hypothetical protein
YP_003051548.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_003051549.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_003051550.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_003051551.1	TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mfa:Mfla_1008 GTP-binding protein Era
YP_003051552.1	KEGG: mfa:Mfla_1007 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein
YP_003051553.1	KEGG: mfa:Mfla_1006 putative transmembrane protein
YP_003051554.1	KEGG: mfa:Mfla_1005 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_003051555.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_003051556.1	KEGG: mfa:Mfla_1003 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein
YP_003051557.1	PFAM: MucB/RseB family protein; KEGG: mfa:Mfla_1002 sigma E regulatory protein, MucB/RseB
YP_003051558.1	PFAM: Anti sigma-E protein RseA family protein; KEGG: mfa:Mfla_1001 hypothetical protein
YP_003051559.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_003051560.1	TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mfa:Mfla_0999 L-aspartate oxidase
YP_003051561.1	KEGG: mfa:Mfla_2084 hypothetical protein
YP_003051562.1	KEGG: dar:Daro_3154 hypothetical protein
YP_003051563.1	PFAM: protein of unknown function DUF692; KEGG: nmu:Nmul_A2550 hypothetical protein
YP_003051564.1	KEGG: pau:PA14_21570 hypothetical protein
YP_003051565.1	KEGG: azo:azo2858 hypothetical protein
YP_003051566.1	TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: reh:H16_B2413 DNA-directed RNA polymerase sigma subunit (RpoE,sigma24)
YP_003051567.1	PFAM: Domain of unknown function DUF1841; KEGG: mfa:Mfla_0998 hypothetical protein
YP_003051568.1	KEGG: mfa:Mfla_0996 hypothetical protein
YP_003051569.1	KEGG: mfa:Mfla_0995 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_003051570.1	TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmj:BMULJ_02313 electron transport complex protein
YP_003051571.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_003051572.1	KEGG: mfa:Mfla_0986 uncharacterized lipoprotein
YP_003051573.1	PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_0985 beta-lactamase-like protein
YP_003051575.1	PFAM: NolW domain protein; KEGG: mfa:Mfla_0983 NolW-like protein
YP_003051576.1	KEGG: tbd:Tbd_0584 hypothetical protein
YP_003051577.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: mfa:Mfla_0982 cupin 4
YP_003051578.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_0981 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003051579.1	KEGG: mfa:Mfla_0980 fkbp-type peptidyl-prolyl cis-trans isomerase
YP_003051580.1	PFAM: polysaccharide biosynthesis protein; KEGG: rle:RL3646 putative transmembrane polysaccharide synthesis protein
YP_003051581.1	PFAM: glycosyl transferase family 2; KEGG: eta:ETA_13250 exopolysaccharide biosynthesis glycosyl transferase
YP_003051582.1	KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_003051583.1	KEGG: mfa:Mfla_1717 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003051584.1	PFAM: acyltransferase 3; KEGG: psa:PST_2375 predicted membrane protein
YP_003051585.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bpt:Bpet4550 arsenate reductase
YP_003051586.1	PFAM: acyltransferase 3; KEGG: hch:HCH_01439 acyltransferase
YP_003051587.1	This protein performs the mismatch recognition step during the DNA repair process
YP_003051588.1	PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_2410 lytic transglycosylase, catalytic
YP_003051589.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dar:Daro_1735 UDP-glucose pyrophosphorylase
YP_003051590.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: ppw:PputW619_2916 UDP-glucose 4-epimerase
YP_003051591.1	KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_003051592.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: xfa:XF2360 GumM protein
YP_003051593.1	PFAM: glycosyl transferase family 2; KEGG: ppw:PputW619_2905 glycosyl transferase family protein
YP_003051594.1	PFAM: GtrA family protein; KEGG: ajs:Ajs_0550 GtrA family protein
YP_003051595.1	PFAM: glycosyl transferase group 1; KEGG: ppg:PputGB1_2716 glycosyl transferase group 1
YP_003051596.1	PFAM: O-antigen polymerase; KEGG: har:HEAR0719 hypothetical protein
YP_003051597.1	PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_6724 glycosyl transferase family protein
YP_003051598.1	KEGG: sde:Sde_3947 hypothetical protein
YP_003051599.1	KEGG: rle:RL3648 putative galactosyl transferase
YP_003051600.1	PFAM: glycosyl transferase family 2; KEGG: tgr:Tgr7_2365 glycosyl transferase family protein
YP_003051601.1	PFAM: ExoV-like protein; KEGG: rle:RL3645 putative succinoglycan biosynthesis protein
YP_003051602.1	TIGRFAM: EpsI family protein; KEGG: mpt:Mpe_A0721 hypothetical protein
YP_003051603.1	TIGRFAM: exosortase 2; eight transmembrane protein EpsH; KEGG: lch:Lcho_2352 exosortase 2
YP_003051604.1	TIGRFAM: chain length determinant protein tyrosine kinase EpsG; capsular exopolysaccharide family; KEGG: mfa:Mfla_2024 protein-tyrosine kinase
YP_003051605.1	TIGRFAM: chain length determinant protein EpsF; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis
YP_003051606.1	TIGRFAM: polysaccharide export protein EpsE; PFAM: polysaccharide export protein; KEGG: nmu:Nmul_A0242 polysaccharide export protein
YP_003051607.1	TIGRFAM: peptidyl-prolyl cis-trans isomerase, EpsD family; KEGG: nmu:Nmul_A0241 hypothetical protein
YP_003051608.1	TIGRFAM: exopolysaccharide biosynthesis operon protein EpsL; KEGG: pol:Bpro_1876 hypothetical protein
YP_003051609.1	PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mfa:Mfla_1926 cyclic nucleotide-binding domain-containing protein
YP_003051610.1	KEGG: mfa:Mfla_1927 LuxR family transcriptional regulator; TIGRFAM: transcriptional regulator EpsA; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR
YP_003051611.1	TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: pol:Bpro_1875 sugar transferase
YP_003051612.1	PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_2396 hypothetical protein
YP_003051613.1	PFAM: inositol monophosphatase; KEGG: mfa:Mfla_0813 inositol monophosphatase
YP_003051614.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mfa:Mfla_0812 RNA methyltransferase TrmH, group 1
YP_003051615.1	TIGRFAM: serine O-acetyltransferase; KEGG: mfa:Mfla_0811 serine O-acetyltransferase
YP_003051616.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mfa:Mfla_0810 BadM/Rrf2 family transcriptional regulator
YP_003051617.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_0809 aminotransferase, class V
YP_003051618.1	KEGG: mfa:Mfla_0808 cysteine desulfurase IscS; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III
YP_003051619.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mfa:Mfla_0807 scaffold protein
YP_003051620.1	TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mfa:Mfla_0806 iron-sulfur cluster assembly protein IscA
YP_003051621.1	KEGG: mfa:Mfla_0805 co-chaperone Hsc20; TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_003051622.1	TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; KEGG: mfa:Mfla_0804 Fe-S protein assembly chaperone HscA
YP_003051623.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: reu:Reut_A1064 ferredoxin, 2Fe-2S type
YP_003051624.1	KEGG: mfa:Mfla_0802 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003051625.1	KEGG: gur:Gura_3476 hypothetical protein
YP_003051626.1	PFAM: protein of unknown function DUF583; KEGG: mfa:Mfla_0798 hypothetical protein
YP_003051627.1	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mfa:Mfla_0797 lysyl-tRNA synthetase
YP_003051628.1	TIGRFAM: phosphate binding protein; KEGG: mfa:Mfla_0795 phosphate binding protein
YP_003051629.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0794 phosphate ABC transporter permease
YP_003051630.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0793 phosphate ABC transporter permease
YP_003051631.1	KEGG: mfa:Mfla_0792 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003051632.1	PFAM: FAD dependent oxidoreductase; KEGG: bac:BamMC406_0944 D-amino-acid dehydrogenase
YP_003051633.1	PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0790 1,2-diacylglycerol 3-glucosyltransferase
YP_003051634.1	KEGG: mfa:Mfla_0789 hypothetical protein
YP_003051635.1	PFAM: diacylglycerol kinase; KEGG: mfa:Mfla_0788 diacylglycerol kinase
YP_003051636.1	KEGG: mfa:Mfla_0787 hypothetical protein
YP_003051637.1	KEGG: msl:Msil_3517 hypothetical protein
YP_003051638.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: msl:Msil_3516 transcriptional regulator, AraC family
YP_003051639.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: mfa:Mfla_0786 phosphoesterase, PA-phosphatase related
YP_003051640.1	KEGG: mfa:Mfla_0785 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
YP_003051641.1	KEGG: mfa:Mfla_0784 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_003051642.1	KEGG: mfa:Mfla_0783 membrane protease FtsH catalytic subunit; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_003051643.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mfa:Mfla_0782 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_003051644.1	PFAM: protein of unknown function UPF0044; KEGG: cvi:CV_3799 hypothetical protein
YP_003051645.1	KEGG: mfa:Mfla_0781 hypothetical protein
YP_003051646.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mfa:Mfla_0780 GreA/GreB family elongation factor
YP_003051647.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mfa:Mfla_0779 carbamoyl-phosphate synthase large subunit
YP_003051648.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: mfa:Mfla_0778 carbamoyl-phosphate synthase small subunit
YP_003051649.1	KEGG: mfa:Mfla_0777 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase
YP_003051650.1	PFAM: SmpA/OmlA domain protein; KEGG: mfa:Mfla_0776 SmpA/OmlA
YP_003051651.1	PFAM: ferric-uptake regulator; KEGG: dar:Daro_0934 ferric uptake regulator family protein
YP_003051652.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mfa:Mfla_0775 DNA repair protein RecN
YP_003051653.1	PFAM: ATP-NAD/AcoX kinase; KEGG: mfa:Mfla_0774 NAD(+) kinase
YP_003051654.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_003051655.1	PFAM: type IV pilus assembly PilZ; KEGG: mmw:Mmwyl1_2279 hypothetical protein
YP_003051656.1	KEGG: mfa:Mfla_0772 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase
YP_003051657.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mfa:Mfla_0771 ADP-glyceromanno-heptose 6-epimerase precursor
YP_003051658.1	PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_0770 phosphoheptose isomerase
YP_003051659.1	TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: mfa:Mfla_0769 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase
YP_003051660.1	TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: mfa:Mfla_0768 lipopolysaccharide heptosyltransferase II
YP_003051661.1	KEGG: mfa:Mfla_0767 hypothetical protein
YP_003051662.1	PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0763 glycosyl transferase, group 1
YP_003051663.1	KEGG: mfa:Mfla_0762 toluene tolerance protein, putative
YP_003051664.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0761 haloacid dehalogenase-like hydrolase
YP_003051665.1	KEGG: mfa:Mfla_0760 2-keto-3-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_003051666.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_003051667.1	PFAM: Carbamoyltransferase; KEGG: mfa:Mfla_0758 carbamoyltransferase
YP_003051668.1	PFAM: lipopolysaccharide kinase; KEGG: mfa:Mfla_0757 hypothetical protein
YP_003051669.1	KEGG: pfo:Pfl01_2033 hypothetical protein
YP_003051670.1	PFAM: lipopolysaccharide kinase; KEGG: azo:azo3570 lipopolysaccharide core biosynthesis protein
YP_003051671.1	PFAM: lipopolysaccharide kinase; KEGG: mfa:Mfla_0755 lipopolysaccharide kinase
YP_003051672.1	PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_0754 glycosyl transferase, group 1
YP_003051673.1	TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: mfa:Mfla_0753 lipopolysaccharide heptosyltransferase I
YP_003051674.1	PFAM: GrpE protein; KEGG: mfa:Mfla_0752 GrpE protein
YP_003051675.1	TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: mfa:Mfla_0751 chaperone DnaK
YP_003051676.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_003051677.1	PFAM: glycosyl transferase family 9; KEGG: noc:Noc_0578 glycosyl transferase family protein
YP_003051678.1	PFAM: O-antigen polymerase; KEGG: tgr:Tgr7_2080 O-antigen polymerase
YP_003051679.1	PFAM: glycosyl transferase family 9; KEGG: pla:Plav_1688 glycosyl transferase family protein
YP_003051680.1	PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_0797 glycosyl transferase, group 1
YP_003051681.1	PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_0467 glycosyl transferase group 1
YP_003051682.1	PFAM: protein of unknown function DUF1022; KEGG: noc:Noc_0559 hypothetical protein
YP_003051683.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: mfa:Mfla_0748 2-isopropylmalate synthase
YP_003051684.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mfa:Mfla_0746 alpha/beta hydrolase fold-3
YP_003051685.1	KEGG: mfa:Mfla_0739 glyoxalase I; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_003051686.1	PFAM: extracellular solute-binding protein family 3; chemotaxis sensory transducer; SMART: extracellular solute-binding protein family 3; chemotaxis sensory transducer; KEGG: tgr:Tgr7_2287 methyl-accepting chemotaxis sensory transducer
YP_003051687.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pag:PLES_03591 ferredoxin
YP_003051688.1	KEGG: mfa:Mfla_0737 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_003051689.1	KEGG: mfa:Mfla_0736 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative
YP_003051690.1	PFAM: peptidase M16 domain protein; KEGG: mfa:Mfla_0735 peptidase M16-like protein
YP_003051691.1	PFAM: peptidase M16 domain protein; KEGG: mfa:Mfla_0734 peptidase M16-like protein
YP_003051692.1	KEGG: mfa:Mfla_0733 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_003051693.1	KEGG: mfa:Mfla_0732 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003051694.1	PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_0731 cell division protein FtsX
YP_003051695.1	KEGG: mfa:Mfla_1358 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II
YP_003051696.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0729 oxidoreductase FAD-binding region
YP_003051697.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mfa:Mfla_0728 electron transfer flavoprotein, alpha subunit
YP_003051698.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mfa:Mfla_0727 electron transfer flavoprotein beta-subunit
YP_003051699.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_0726 LysR family transcriptional regulator
YP_003051700.1	PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase; KEGG: mfa:Mfla_0725 electron-transferring-flavoprotein dehydrogenase
YP_003051701.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: maq:Maqu_2184 alkylphosphonate utilization operon protein PhnA
YP_003051702.1	PFAM: thiopurine S-methyltransferase; KEGG: cps:CPS_3096 thiopurine S-methyltransferase family protein
YP_003051704.1	KEGG: pat:Patl_1983 hypothetical protein
YP_003051706.1	PFAM: phosphate-selective porin O and P; KEGG: tcx:Tcr_1417 hypothetical protein
YP_003051707.1	KEGG: abc:ACICU_03420 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V
YP_003051708.1	KEGG: azo:azo2388 hypothetical protein
YP_003051709.1	KEGG: rpe:RPE_4432 hypothetical protein
YP_003051710.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_0254 ABC transporter related
YP_003051711.1	KEGG: pfs:PFLU3423 hypothetical protein
YP_003051712.1	PFAM: inner-membrane translocator; KEGG: pna:Pnap_0551 inner-membrane translocator
YP_003051713.1	PFAM: inner-membrane translocator; KEGG: pna:Pnap_0550 inner-membrane translocator
YP_003051714.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0549 ABC transporter related
YP_003051715.1	KEGG: avn:Avin_43550 long-chain-fatty-acid--CoA ligase-related protein
YP_003051716.1	PFAM: Luciferase-like monooxygenase; KEGG: avn:Avin_43560 dimethyl sulfone monooxygenase; SfnG
YP_003051717.1	PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_6034 FMN reductase
YP_003051718.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_C7712 acyl-CoA dehydrogenase, central region
YP_003051719.1	PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: mms:mma_0049 TetR family transcriptional regulator
YP_003051720.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS05806 putative outer membrane lipoprotein
YP_003051721.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_4105 secretion protein HlyD
YP_003051722.1	PFAM: acriflavin resistance protein; KEGG: mms:mma_0052 cation/multidrug efflux pump
YP_003051723.1	PFAM: amidohydrolase 2; KEGG: avn:Avin_43860 amidohydrolase
YP_003051724.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pna:Pnap_0557 acyl-CoA dehydrogenase type 2
YP_003051725.1	PFAM: Luciferase-like monooxygenase; KEGG: psp:PSPPH_3167 alkanesulfonate monooxygenase family protein
YP_003051726.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pap:PSPA7_2907 putative FMNH2-dependent monooxygenase
YP_003051727.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aav:Aave_0881 sigma-54 dependent trancsriptional regulator
YP_003051728.1	KEGG: mfa:Mfla_1358 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II
YP_003051729.1	KEGG: swd:Swoo_3507 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3
YP_003051730.1	PFAM: Patatin; KEGG: wpi:WPa_0272 patatin family protein
YP_003051731.1	KEGG: vvy:VV1695 hypothetical protein
YP_003051732.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_0109 TonB-dependent siderophore receptor
YP_003051733.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1035 twin-arginine translocation pathway signal
YP_003051734.1	KEGG: involved in cytoskeletal control; K11238 cytokinesis protein
YP_003051735.1	KEGG: psa:PST_1628 hypothetical protein
YP_003051736.1	PFAM: sulfatase; KEGG: mfa:Mfla_0756 hypothetical protein
YP_003051737.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mms:mma_0763 sensory box protein
YP_003051738.1	PFAM: NADPH-dependent FMN reductase; KEGG: mfa:Mfla_1569 NADPH-dependent FMN reductase
YP_003051739.1	PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein
YP_003051740.1	PFAM: protein of unknown function DUF330; KEGG: eca:ECA1563 putative lipoprotein
YP_003051741.1	PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_C6816 paraquat-inducible protein B'
YP_003051742.1	PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_C6817 paraquat-inducible protein A
YP_003051743.1	PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_C6818 paraquat-inducible protein A
YP_003051745.1	KEGG: rso:RSc3165 hypothetical protein
YP_003051746.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein
YP_003051747.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_3006 protein of unknown function DUF6, transmembrane
YP_003051749.1	KEGG: rfr:Rfer_1218 natural resistance-associated macrophage protein
YP_003051751.1	KEGG: dat:HRM2_39270 hypothetical protein
YP_003051752.1	PFAM: class II aldolase/adducin family protein; KEGG: sfu:Sfum_2465 class II aldolase/adducin family protein
YP_003051753.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mms:mma_1390 ABC transporter, ATP-binding/permease fusion protein, type I secretion pathway
YP_003051754.1	KEGG: rec:RHECIAT_CH0000808 putative rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
YP_003051755.1	KEGG: mms:mma_1389 hypothetical protein
YP_003051756.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1388 HlyD family secretion protein
YP_003051757.1	KEGG: mms:mma_1387 hypothetical protein
YP_003051758.1	PFAM: outer membrane efflux protein; KEGG: mms:mma_1386 hypothetical protein
YP_003051759.1	PFAM: Bet v I allergen; KEGG: azo:azo2022 hypothetical protein
YP_003051760.1	PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0309 TetR family transcriptional regulator
YP_003051761.1	KEGG: mfa:Mfla_0308 hypothetical protein
YP_003051762.1	TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mfa:Mfla_0702 sigma 32 (RpoH)
YP_003051764.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: mfa:Mfla_0701 cytochrome oxidase maturation protein, cbb3-type
YP_003051765.1	KEGG: mfa:Mfla_0700 hypothetical protein
YP_003051766.1	PFAM: protein of unknown function DUF971; KEGG: mfa:Mfla_0699 hypothetical protein
YP_003051767.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mfa:Mfla_0698 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase
YP_003051768.1	KEGG: mfa:Mfla_0697 hypothetical protein
YP_003051769.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions
YP_003051770.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: neu:NE1858 hypothetical protein
YP_003051771.1	PFAM: Na+/solute symporter; KEGG: mfa:Mfla_0695 Na+/solute symporter
YP_003051772.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_003051773.1	KEGG: mfa:Mfla_0685 hypothetical protein
YP_003051774.1	KEGG: mfa:Mfla_0684 hypothetical protein
YP_003051775.1	KEGG: mfa:Mfla_0683 ABC transporter, permease protein, putative
YP_003051776.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_0682 ABC transporter related
YP_003051777.1	SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0681 tetratricopeptide TPR_2
YP_003051778.1	TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; KEGG: mfa:Mfla_0680 outer membrane lipoprotein LolB
YP_003051779.1	KEGG: mfa:Mfla_0679 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_003051780.1	KEGG: mfa:Mfla_0678 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_003051781.1	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: mfa:Mfla_0677 50S ribosomal protein L25P
YP_003051782.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_003051783.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_003051785.1	PFAM: Ankyrin; SMART: Ankyrin; KEGG: ankyrin repeat protein
YP_003051786.1	KEGG: sbp:Sbal223_4520 type I restriction-modification system methyltransferase subunit
YP_003051787.1	KEGG: pfs:pQBR0338 hypothetical protein
YP_003051788.1	PFAM: Chorismate mutase; KEGG: mes:Meso_3340 chorismate mutase
YP_003051790.1	TIGRFAM: primosome, DnaD subunit; KEGG: hypothetical protein
YP_003051791.1	KEGG: abu:Abu_1063 hypothetical protein
YP_003051792.1	PFAM: YadA domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_B0323 YadA-like haemagluttinin
YP_003051794.1	KEGG: mlo:mll7725 hypothetical protein
YP_003051795.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: rbo:A1I_03770 P pilus assembly, fimbrial usher protein
YP_003051796.1	KEGG: conserved hypothetical protein
YP_003051797.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_3094 ATPase central domain-containing protein
YP_003051798.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: hch:HCH_02679 beta-glucosidase-like protein
YP_003051799.1	KEGG: bvi:Bcep1808_2147 hypothetical protein
YP_003051800.1	KEGG: dol:Dole_0903 type III restriction system methylase
YP_003051801.1	PFAM: domain of unknown function DUF1738; KEGG: sbn:Sbal195_4668 hypothetical protein
YP_003051802.1	KEGG: hypothetical protein
YP_003051804.1	KEGG: bgl:bglu_1g24260 hypothetical protein
YP_003051805.1	KEGG: hypothetical protein
YP_003051808.1	SMART: AAA ATPase; KEGG: sml:Smlt3058 hypothetical protein
YP_003051809.1	KEGG: hypothetical protein
YP_003051810.1	KEGG: viral A-type inclusion protein
YP_003051811.1	KEGG: AGAP002737-PA
YP_003051812.1	KEGG: bvi:Bcep1808_2057 type IV secretory pathway VirD4 components-like protein
YP_003051814.1	KEGG: DNA polymerase alpha; K02320 DNA polymerase alpha   subunit A
YP_003051816.1	KEGG: abu:Abu_1063 hypothetical protein
YP_003051817.1	KEGG: ott:OTT_1835 putative conjugative transfer protein TraA
YP_003051818.1	KEGG: viral A-type inclusion protein
YP_003051826.1	KEGG: lpc:LPC_0165 hypothetical protein
YP_003051827.1	KEGG: lpn:lpg1269 hypothetical protein
YP_003051832.1	KEGG: hypothetical protein
YP_003051835.1	KEGG: maq:Maqu_3765 TonB family protein
YP_003051837.1	KEGG: dvl:Dvul_1052 plasmid/phage primase
YP_003051840.1	KEGG: bgl:bglu_1g24020 hypothetical protein
YP_003051841.1	KEGG: bgl:bglu_1g24020 hypothetical protein
YP_003051844.1	KEGG: sbn:Sbal195_3157 GCN5-related N-acetyltransferase
YP_003051845.1	KEGG: hypothetical protein
YP_003051846.1	KEGG: bcj:BCAS0661A hypothetical protein
YP_003051848.1	KEGG: bgl:bglu_1g24010 hypothetical protein
YP_003051849.1	PFAM: Domain of unknown function DUF1814; KEGG: ajs:Ajs_1569 hypothetical protein
YP_003051850.1	KEGG: vei:Veis_3690 hypothetical protein
YP_003051851.1	KEGG: bvi:Bcep1808_2681 hypothetical protein
YP_003051856.1	KEGG: abu:Abu_1063 hypothetical protein
YP_003051857.1	KEGG: sit:TM1040_3583 hypothetical protein
YP_003051858.1	PFAM: integrase family protein; KEGG: lpf:lpl0065 hypothetical protein
YP_003051859.1	KEGG: sea:SeAg_B2778 hypothetical protein
YP_003051860.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpi:Rpic_4556 transcriptional regulator, LysR family
YP_003051861.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_003051862.1	KEGG: rpi:Rpic_4558 hypothetical protein
YP_003051863.1	KEGG: afe:Lferr_1367 hypothetical protein
YP_003051864.1	KEGG: cak:Caul_1030 hypothetical protein
YP_003051865.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_0968 GCN5-related N-acetyltransferase
YP_003051866.1	PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: mfa:Mfla_1147 nuclease (SNase-like)
YP_003051867.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: abu:Abu_2318 sulfatase
YP_003051869.1	KEGG: sbn:Sbal195_2908 peptidoglycan binding domain-containing protein
YP_003051871.1	PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: xop:PXO_04252 LysM domain protein
YP_003051872.1	TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_B2108 two domain protein: VgrG and COG4253
YP_003051873.1	PFAM: DoxX family protein; KEGG: rfr:Rfer_2574 DoxX
YP_003051874.1	PFAM: Pirin domain protein; KEGG: rfr:Rfer_0805 pirin-like
YP_003051875.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: eba:ebA3879 acyl carrier protein phosphodiesterase
YP_003051876.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azo:azo3371 LysR family transcriptional regulator
YP_003051877.1	TIGRFAM: LexA repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: mfa:Mfla_1781 putative prophage repressor
YP_003051878.1	PFAM: protein of unknown function DUF482; KEGG: mfa:Mfla_0657 hypothetical protein
YP_003051879.1	KEGG: mfa:Mfla_0656 osmotically inducible lipoprotein
YP_003051880.1	KEGG: mfa:Mfla_0655 signal transduction protein
YP_003051881.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_0654 two component transcriptional regulator
YP_003051882.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0653 histidine kinase
YP_003051883.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0652 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase
YP_003051884.1	PFAM: Haemin-degrading family protein; KEGG: vei:Veis_3081 hemin-degrading family protein
YP_003051885.1	PFAM: periplasmic binding protein; KEGG: vei:Veis_3080 periplasmic binding protein
YP_003051886.1	PFAM: transport system permease protein; KEGG: vei:Veis_3079 transport system permease protein
YP_003051887.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_3078 ABC transporter related
YP_003051888.1	KEGG: mfa:Mfla_0651 tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB
YP_003051889.1	PFAM: PhoH family protein; KEGG: mfa:Mfla_0650 PhoH-like protein
YP_003051890.1	PFAM: protein of unknown function UPF0054; KEGG: mfa:Mfla_0649 hypothetical protein
YP_003051891.1	PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: mfa:Mfla_0648 CBS
YP_003051893.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: rpi:Rpic_3207 large conductance mechanosensitive channel protein
YP_003051894.1	Transfers the fatty acyl group on membrane lipoproteins
YP_003051895.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_003051896.1	KEGG: mpt:Mpe_A3380 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit
YP_003051897.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_003051898.1	PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mfa:Mfla_0642 phospholipid/glycerol acyltransferase
YP_003051899.1	PFAM: protein of unknown function DUF45; KEGG: mfa:Mfla_0641 hypothetical protein
YP_003051900.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mfa:Mfla_0640 BadM/Rrf2 family transcriptional regulator
YP_003051901.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0639 globin
YP_003051902.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mfa:Mfla_0638 BFD-like (2Fe-2S)-binding region
YP_003051903.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: dar:Daro_1061 bacterioferritin
YP_003051904.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: mfa:Mfla_0636 bacterioferritin
YP_003051905.1	TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0635 heavy metal translocating P-type ATPase
YP_003051906.1	PFAM: FixH family protein; KEGG: mfa:Mfla_0634 hypothetical protein
YP_003051907.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: mfa:Mfla_0633 4Fe-4S ferredoxin, iron-sulfur binding
YP_003051908.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: mfa:Mfla_0632 cytochrome c oxidase, cbb3-type, subunit III
YP_003051909.1	KEGG: mfa:Mfla_0631 hypothetical protein
YP_003051910.1	CcoO; FixO
YP_003051911.1	CcoN; FixN
YP_003051912.1	PFAM: OmpW family protein; KEGG: mfa:Mfla_0627 OmpW
YP_003051913.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_003051914.1	KEGG: mfa:Mfla_0625 hypothetical protein
YP_003051915.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_003051916.1	TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: eba:ebA1022 hypothetical protein
YP_003051917.1	KEGG: mfa:Mfla_0621 hypothetical protein
YP_003051918.1	PFAM: phosphate-selective porin O and P; KEGG: mca:MCA0900 hypothetical protein
YP_003051919.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mfa:Mfla_0620 thiosulphate-binding protein
YP_003051920.1	KEGG: mfa:Mfla_0619 hypothetical protein
YP_003051921.1	PFAM: TOBE domain protein; KEGG: mfa:Mfla_0618 molybdenum-pterin binding domain-containing protein
YP_003051922.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_0617 SufS subfamily cysteine desulfurase
YP_003051923.1	KEGG: mfa:Mfla_0616 major membrane protein I
YP_003051924.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: mfa:Mfla_0615 serine O-acetyltransferase
YP_003051925.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mfa:Mfla_0614 thiosulphate-binding protein
YP_003051926.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_0612 diguanylate phosphodiesterase
YP_003051927.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0611 sulfate ABC transporter, permease protein CysT
YP_003051928.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_0610 sulfate ABC transporter, permease protein CysW
YP_003051929.1	KEGG: mfa:Mfla_0609 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003051930.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: aci:ACIAD3392 putative long-chain fatty acid transport protein
YP_003051931.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mms:mma_0458 hypothetical protein
YP_003051932.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: psa:PST_2526 YeeE/YedE family protein
YP_003051933.1	KEGG: mfa:Mfla_0600 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_003051934.1	KEGG: mfa:Mfla_0599 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_003051935.1	PFAM: deoxynucleoside kinase; KEGG: mfa:Mfla_0598 deoxynucleoside kinase
YP_003051936.1	KEGG: azo:azo3144 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_003051937.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_003051938.1	KEGG: dvm:DvMF_2303 esterase/lipase-like protein
YP_003051939.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mfa:Mfla_1351 TonB-dependent receptor
YP_003051940.1	PFAM: FecR protein; KEGG: mfa:Mfla_1352 putative FecR
YP_003051941.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: mfa:Mfla_1353 sigma-24 (FecI-like)
YP_003051942.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_003051943.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mfa:Mfla_0593 iojap-related protein
YP_003051944.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_003051945.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mfa:Mfla_0591 deoxyribodipyrimidine photo-lyase type I
YP_003051946.1	TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecf:ECH74115_4246 galactose-proton symporter
YP_003051947.1	KEGG: GE23677 gene product from transcript GE23677-RA
YP_003051948.1	PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: neu:NE0521 fructose-1,6-bisphosphatase
YP_003051949.1	PFAM: VacJ family lipoprotein; KEGG: mfa:Mfla_0585 VacJ-like lipoprotein
YP_003051950.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mfa:Mfla_0584 microcin-processing peptidase 1
YP_003051951.1	PFAM: protein of unknown function DUF615; KEGG: mfa:Mfla_0583 hypothetical protein
YP_003051952.1	KEGG: mfa:Mfla_0576 putative site-specific recombinase, prophage insertion
YP_003051953.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: mfa:Mfla_0575 hypothetical protein
YP_003051954.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_003051955.1	KEGG: mfa:Mfla_0573 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_003051956.1	TIGRFAM: extracellular repeat protein, HAF family; PFAM: protein of unknown function DUF1555; KEGG: geo:Geob_2006 extracellular repeat protein, HAF family
YP_003051957.1	PFAM: phosphatidylglycerophosphatase A; KEGG: mfa:Mfla_0572 phosphatidylglycerophosphatase
YP_003051958.1	PFAM: CinA domain protein; KEGG: nmu:Nmul_A0015 CinA-like
YP_003051959.1	KEGG: mpt:Mpe_A1315 putative transmembrane protein
YP_003051960.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_003051961.1	PFAM: regulatory protein RecX; KEGG: mfa:Mfla_0569 regulatory protein RecX
YP_003051962.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003051963.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_003051967.1	PFAM: protein of unknown function DUF1555; KEGG: lch:Lcho_1067 hypothetical protein
YP_003051968.1	PFAM: Catalase domain protein; ThiJ/PfpI domain protein; KEGG: pna:Pnap_1830 catalase
YP_003051969.1	KEGG: rme:Rmet_6151 ATPase involved in DNA repair
YP_003051970.1	KEGG: nha:Nham_0324 hypothetical protein
YP_003051971.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: xcv:XCV3021 methyl-accepting chemotaxis protein
YP_003051972.1	PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: tbd:Tbd_1181 malate dehydrogenase (oxaloacetate-decarboxylating)
YP_003051973.1	KEGG: tgr:Tgr7_3247 hypothetical protein
YP_003051974.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mca:MCA2720 CzcA family heavy metal efflux protein
YP_003051975.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tgr:Tgr7_3245 efflux transporter, RND family, MFP subunit
YP_003051976.1	KEGG: tbd:Tbd_1748 putative outer membrane protein
YP_003051978.1	PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: har:HEAR0927 putative two-component histidine kinase sensor protein
YP_003051979.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: har:HEAR0928 putative response regulator receiver (Che-Y like)
YP_003051980.1	KEGG: har:HEAR0929 putative sensor/regulator protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein
YP_003051981.1	PFAM: glucose sorbosone dehydrogenase; KEGG: mfa:Mfla_0530 glucose sorbosone dehydrogenase
YP_003051982.1	PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mfa:Mfla_0019 CBS domain-containing protein
YP_003051983.1	PFAM: protein of unknown function DUF455; KEGG: mfa:Mfla_1042 hypothetical protein
YP_003051984.1	PFAM: regulatory protein TetR; KEGG: rso:RSc0820 putative transcription regulator protein
YP_003051985.1	PFAM: nitroreductase; KEGG: rso:RSc0821 putative NADPH nitroreductase protein
YP_003051986.1	PFAM: protein of unknown function DUF299; KEGG: mfa:Mfla_2204 hypothetical protein
YP_003051987.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_003051989.1	PFAM: protein of unknown function DUF481; KEGG: mfa:Mfla_0527 hypothetical protein
YP_003051990.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0990 HAD family hydrolase
YP_003051991.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: gbm:Gbem_3030 phosphoesterase PA-phosphatase related
YP_003051992.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_0010 transport-associated
YP_003051993.1	PFAM: YaeQ family protein; KEGG: mfa:Mfla_0160 YaeQ
YP_003051994.1	KEGG: mfa:Mfla_0522 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_003051995.1	PFAM: cytochrome c assembly protein; KEGG: mfa:Mfla_0521 cytochrome c assembly protein
YP_003051996.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mfa:Mfla_0520 HAD family hydrolase
YP_003051997.1	KEGG: mfa:Mfla_0519 putative integral membrane protein
YP_003051998.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_003051999.1	KEGG: mfa:Mfla_0515 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003052000.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_003052001.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mfa:Mfla_0513 protein translocase subunit YajC
YP_003052002.1	TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mfa:Mfla_0512 protein-export membrane protein SecD
YP_003052003.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_003052004.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: nmu:Nmul_A2132 hypothetical protein
YP_003052005.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mfa:Mfla_0509 ATP-dependent Clp protease adaptor protein ClpS
YP_003052006.1	KEGG: mfa:Mfla_0508 ATPase AAA-2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase
YP_003052007.1	PFAM: Glutathione S-transferase domain; glutaredoxin; KEGG: mfa:Mfla_0507 glutathione S-transferase-like protein
YP_003052008.1	KEGG: tmz:Tmz1t_1015 hypothetical protein
YP_003052009.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_003052011.1	PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_0505 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_003052012.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0504 heavy metal efflux pump CzcA
YP_003052013.1	PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_0505 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_003052014.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0504 heavy metal efflux pump CzcA
YP_003052015.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0503 secretion protein HlyD
YP_003052016.1	PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0502 outer membrane efflux protein
YP_003052017.1	KEGG: mfa:Mfla_0501 hypothetical protein
YP_003052018.1	KEGG: mfa:Mfla_0500 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M)
YP_003052019.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0499 tetratricopeptide TPR_2
YP_003052020.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mfa:Mfla_0498 ErfK/YbiS/YcfS/YnhG
YP_003052021.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mfa:Mfla_0497 peptidylprolyl isomerase
YP_003052022.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mfa:Mfla_0496 peptidylprolyl isomerase
YP_003052023.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_003052024.1	PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: eba:ebA4165 hypothetical protein
YP_003052025.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mfa:Mfla_0493 NusB antitermination factor
YP_003052026.1	KEGG: mfa:Mfla_0492 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_003052027.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_0490 major facilitator transporter
YP_003052028.1	KEGG: mfa:Mfla_0489 two component transcriptional regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_003052029.1	KEGG: mfa:Mfla_0488 multi-sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003052030.1	KEGG: hypothetical protein
YP_003052031.1	PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mfa:Mfla_0476 FAD linked oxidase-like protein
YP_003052032.1	PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mfa:Mfla_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003052033.1	PFAM: conserved hypothetical protein; KEGG: mfa:Mfla_0474 hypothetical protein
YP_003052034.1	KEGG: mfa:Mfla_0473 hypothetical protein
YP_003052035.1	KEGG: xau:Xaut_0030 hypothetical protein
YP_003052036.1	PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0472 TetR family transcriptional regulator
YP_003052037.1	PFAM: PfkB domain protein; KEGG: mfa:Mfla_0471 PfkB
YP_003052038.1	PFAM: 17 kDa surface antigen; KEGG: mfa:Mfla_0470 17 kDa surface antigen
YP_003052039.1	KEGG: mfa:Mfla_0469 ornithine-acyl[acyl carrier protein] N-acyltransferase
YP_003052040.1	PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mfa:Mfla_0468 lyso-ornithine lipid acyltransferase
YP_003052041.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_003052042.1	PFAM: cytochrome c class I; KEGG: tbd:Tbd_0146 cytochrome c5
YP_003052043.1	PFAM: sulfatase; KEGG: esa:ESA_04100 hypothetical protein
YP_003052044.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: ppw:PputW619_2476 2OG-Fe(II) oxygenase
YP_003052045.1	TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: mfa:Mfla_0423 S-adenosylmethionine
YP_003052047.1	PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_0421 lytic transglycosylase, catalytic
YP_003052048.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_003052049.1	KEGG: azo:azo2773 hypothetical protein
YP_003052050.1	PFAM: protein of unknown function DUF477; KEGG: mfa:Mfla_0417 hypothetical protein
YP_003052051.1	PFAM: protein of unknown function DUF477; KEGG: mfa:Mfla_0416 hypothetical protein
YP_003052052.1	PFAM: LemA family protein; KEGG: mfa:Mfla_0415 hypothetical protein
YP_003052053.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mfa:Mfla_0414 phage SPO1 DNA polymerase-related protein
YP_003052054.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_0413 SSU ribosomal protein S18P alanine acetyltransferase
YP_003052055.1	PFAM: peptidase M22 glycoprotease; KEGG: mfa:Mfla_0412 peptidase M22, glycoprotease
YP_003052056.1	PFAM: Class I peptide chain release factor; KEGG: rme:Rmet_3468 class I peptide chain release factor
YP_003052057.1	KEGG: vsa:VSAL_I1593 hypothetical protein
YP_003052058.1	KEGG: rpi:Rpic_3527 hypothetical protein
YP_003052059.1	KEGG: mfa:Mfla_0111 hypothetical protein
YP_003052061.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: abc:ACICU_01545 DMT family permease
YP_003052062.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth
YP_003052063.1	PFAM: chaperonin Cpn10; KEGG: bmj:BMULJ_03266 chaperonin GroES
YP_003052064.1	KEGG: cvi:CV_3231 hypothetical protein
YP_003052065.1	PFAM: protein of unknown function DUF202; KEGG: mfa:Mfla_1871 hypothetical protein
YP_003052066.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: msl:Msil_2598 6-phosphogluconate dehydrogenase NAD-binding
YP_003052067.1	KEGG: pen:PSEEN1394 hypothetical protein
YP_003052068.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_0600 LysR family transcriptional regulator
YP_003052069.1	SMART: helicase c2; KEGG: mfa:Mfla_0411 helicase C2
YP_003052070.1	KEGG: bpy:Bphyt_4955 hypothetical protein
YP_003052071.1	KEGG: azo:azo0068 hypothetical protein
YP_003052072.1	PFAM: 20S proteasome A and B subunits; KEGG: mfa:Mfla_0401 20S proteasome, A and B subunits
YP_003052073.1	PFAM: aldo/keto reductase; KEGG: mfa:Mfla_0400 aldo/keto reductase
YP_003052074.1	KEGG: sdn:Sden_0374 hypothetical protein
YP_003052075.1	PFAM: globin; KEGG: mpt:Mpe_A1232 globin protein
YP_003052076.1	KEGG: mpt:Mpe_A0215 hypothetical protein
YP_003052077.1	KEGG: mpt:Mpe_A0214 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_003052078.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_003052079.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_2281 hypothetical protein
YP_003052080.1	KEGG: mfa:Mfla_2282 putative lipoprotein-like protein
YP_003052081.1	PFAM: protein of unknown function UPF0102; KEGG: mfa:Mfla_2283 hypothetical protein
YP_003052082.1	KEGG: mfa:Mfla_2284 phosphoheptose isomerase
YP_003052083.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: mfa:Mfla_2285 transport-associated
YP_003052084.1	KEGG: mfa:Mfla_2286 hypothetical protein
YP_003052085.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2118 thioredoxin
YP_003052086.1	PFAM: conserved hypothetical protein; KEGG: tcx:Tcr_0411 hypothetical protein
YP_003052087.1	KEGG: mfa:Mfla_2287 hypothetical protein
YP_003052088.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: mfa:Mfla_2288 diguanylate phosphodiesterase
YP_003052089.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mfa:Mfla_2289 thioredoxin
YP_003052090.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_003052091.1	TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: mfa:Mfla_2291 50S ribosomal protein L31P
YP_003052092.1	KEGG: mfa:Mfla_2292 glycosyl transferase family protein
YP_003052093.1	KEGG: sit:TM1040_3662 molybdate ABC transporter ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_003052094.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_3645 molybdate ABC transporter, inner membrane subunit
YP_003052095.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: abb:ABBFA_001744 molybdate ABC transporter, periplasmic molybdate-binding protein
YP_003052096.1	PFAM: phosphate-selective porin O and P; KEGG: nmu:Nmul_A2678 phosphate-selective porin O and P
YP_003052097.1	PFAM: regulatory protein LysR; KEGG: mfa:Mfla_2293 ModE family transcriptional regulator
YP_003052098.1	KEGG: mfa:Mfla_2294 molybdenum cofactor synthesis-like protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003052099.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mfa:Mfla_2295 molybdenum cofactor guanylyltransferase
YP_003052100.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mfa:Mfla_2296 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_003052101.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: mfa:Mfla_2297 molybdopterin molybdochelatase
YP_003052102.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0746 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003052103.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_2301 TonB-dependent receptor
YP_003052104.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: mfa:Mfla_2579 hypothetical protein
YP_003052105.1	PFAM: cytochrome B561; KEGG: mfa:Mfla_2303 cytochrome b561
YP_003052106.1	PFAM: beta-lactamase domain protein; KEGG: mfa:Mfla_2305 beta-lactamase-like protein
YP_003052108.1	TIGRFAM: TonB family protein; KEGG: mfa:Mfla_2306 TonB-like protein
YP_003052109.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2307 periplasmic sensor signal transduction histidine kinase
YP_003052110.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_2308 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003052111.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: mfa:Mfla_2309 PhoH-like protein
YP_003052112.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2310 lysophospholipid transporter LplT
YP_003052113.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mfa:Mfla_2311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003052114.1	PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I
YP_003052115.1	PFAM: cytochrome c class I; KEGG: mfa:Mfla_2312 cytochrome c, class I
YP_003052116.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mfa:Mfla_2313 extracellular solute-binding protein
YP_003052117.1	KEGG: mfa:Mfla_2314 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003052118.1	KEGG: mfa:Mfla_2315 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_003052119.1	KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein; TIGRFAM: ribonuclease BN; PFAM: cyclic nucleotide-binding; ribonuclease BN; SMART: cyclic nucleotide-binding
YP_003052120.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2319 rhodanese-like protein
YP_003052121.1	KEGG: AGP19/ATAGP19 (ARABINOGALACTAN-PROTEIN 19)
YP_003052122.1	PFAM: Luciferase-like monooxygenase; KEGG: rfr:Rfer_3316 luciferase-like
YP_003052123.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0609 glyoxalase/bleomycin resistance protein/dioxygenase superfamily
YP_003052124.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_01821 putative transcriptional regulator
YP_003052125.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_4205 short chain dehydrogenase
YP_003052126.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A2852 putative oxidoreductase protein
YP_003052127.1	KEGG: pmu:PM1539 hypothetical protein
YP_003052128.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: cja:CJA_1577 fic family protein
YP_003052129.1	KEGG: pla:Plav_1849 hypothetical protein
YP_003052130.1	KEGG: pla:Plav_1848 hypothetical protein
YP_003052131.1	PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7223 hypothetical protein
YP_003052132.1	KEGG: ade:Adeh_0541 hypothetical protein
YP_003052133.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dar:Daro_2298 two component transcriptional regulator
YP_003052134.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_7225 integral membrane sensor signal transduction histidine kinase
YP_003052135.1	TIGRFAM: addiction module antidote protein, HigA family; KEGG: gme:Gmet_2972 XRE family plasmid maintenance system antidote protein
YP_003052136.1	PFAM: plasmid maintenance system killer; KEGG: ppf:Pput_4191 plasmid maintenance system killer
YP_003052137.1	KEGG: ccr:CC_3362 hypothetical protein
YP_003052139.1	KEGG: xfn:XfasM23_2207 putative transcriptional regulator
YP_003052141.1	PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: xoo:XOO0605 TraH protein
YP_003052143.1	KEGG: bbr:BB0493 plasmid-related protein
YP_003052144.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: mfa:Mfla_2322 sigma 70 (RpoD)
YP_003052145.1	KEGG: mfa:Mfla_2323 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein
YP_003052146.1	KEGG: mfa:Mfla_2324 hypothetical protein
YP_003052147.1	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: mfa:Mfla_2325 SSU ribosomal protein S21P
YP_003052148.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_003052149.1	PFAM: protein of unknown function DUF205; KEGG: mfa:Mfla_2327 acyl-phosphate glycerol-3-phosphate acyltransferase
YP_003052150.1	TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: mfa:Mfla_2328 dihydroneopterin aldolase
YP_003052151.1	KEGG: mfa:Mfla_2004 hypothetical protein
YP_003052152.1	KEGG: mfa:Mfla_1738 hypothetical protein
YP_003052153.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mfa:Mfla_2329 tyrosine recombinase XerD
YP_003052154.1	TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mfa:Mfla_2330 methylated-DNA--protein-cysteine methyltransferase
YP_003052155.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_003052156.1	KEGG: mfa:Mfla_2332 tRNA (guanine37-N1) methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_003052157.1	TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: mfa:Mfla_2333 16S rRNA processing protein RimM
YP_003052158.1	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: mfa:Mfla_2334 SSU ribosomal protein S16P
YP_003052159.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mfa:Mfla_2335 ExsB
YP_003052160.1	PFAM: Radical SAM domain protein; KEGG: mfa:Mfla_2336 radical SAM family protein
YP_003052161.1	KEGG: mfa:Mfla_2337 tetratricopeptide region; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_003052162.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_2338 OmpA/MotB
YP_003052163.1	TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: mfa:Mfla_2339 TolB-like protein
YP_003052164.1	TIGRFAM: protein TolA; KEGG: mfa:Mfla_2340 hypothetical protein
YP_003052165.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_2341 biopolymer transport protein ExbD/TolR
YP_003052166.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_2342 MotA/TolQ/ExbB proton channel
YP_003052167.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mfa:Mfla_2343 4-hydroxybenzoyl-CoA thioesterase
YP_003052168.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_003052169.1	KEGG: mfa:Mfla_2353 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003052170.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_003052171.1	PFAM: protein of unknown function DUF28; KEGG: mfa:Mfla_2355 hypothetical protein
YP_003052172.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_2356 hypothetical protein
YP_003052173.1	KEGG: mfa:Mfla_2357 putative signal peptide protein
YP_003052174.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2359 MarR family transcriptional regulator
YP_003052175.1	PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mfa:Mfla_2360 signal-transduction protein
YP_003052176.1	TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mfa:Mfla_2361 potassium efflux system protein
YP_003052177.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mfa:Mfla_2362 NAD(P)H dehydrogenase (quinone)
YP_003052178.1	KEGG: pna:Pnap_3867 hypothetical protein
YP_003052179.1	PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2363 hypothetical protein
YP_003052180.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2364 putative formaldehyde-activating enzyme
YP_003052181.1	KEGG: mfa:Mfla_0438 hypothetical protein
YP_003052182.1	KEGG: mfa:Mfla_1357 hypothetical protein
YP_003052183.1	KEGG: swd:Swoo_4383 hypothetical protein
YP_003052184.1	PFAM: TPR repeat-containing protein; transglutaminase domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hch:HCH_06920 hypothetical protein
YP_003052185.1	PFAM: ferredoxin-dependent glutamate synthase; FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mfa:Mfla_0459 glutamate synthase (NADPH) GltB2 subunit
YP_003052186.1	PFAM: glutamate synthase alpha subunit domain protein; KEGG: mfa:Mfla_0458 glutamate synthase (NADPH) GltB3 subunit
YP_003052187.1	PFAM: glutamine amidotransferase class-II; KEGG: mfa:Mfla_0457 glutamate synthase (NADPH) GltB1 subunit
YP_003052188.1	TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mfa:Mfla_0456 L-glutamine synthetase
YP_003052189.1	PFAM: Sarcosine oxidase gamma subunit; KEGG: mfa:Mfla_0455 hypothetical protein
YP_003052190.1	PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; FAD dependent oxidoreductase; KEGG: mfa:Mfla_0454 aminomethyltransferase
YP_003052191.1	PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mfa:Mfla_0453 sarcosine oxidase, delta subunit, heterotetrameric
YP_003052192.1	PFAM: FAD dependent oxidoreductase; KEGG: mfa:Mfla_0452 FAD dependent oxidoreductase
YP_003052193.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: mfa:Mfla_0437 transcriptional regulator
YP_003052194.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_0436 acetyltransferase
YP_003052195.1	PFAM: protein of unknown function DUF140; KEGG: mfa:Mfla_2365 hypothetical protein
YP_003052196.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2366 ABC transporter related
YP_003052197.1	PFAM: Mammalian cell entry related domain protein; KEGG: mfa:Mfla_2368 hypothetical protein
YP_003052198.1	PFAM: protein of unknown function DUF330; KEGG: mfa:Mfla_2369 putative lipoprotein
YP_003052199.1	KEGG: bcn:Bcen_1409 Sel1 repeat-containing protein
YP_003052200.1	SMART: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_B2594 putative phospholipase
YP_003052201.1	KEGG: dar:Daro_2048 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_003052202.1	PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: mpt:Mpe_A2183 hypothetical protein
YP_003052203.1	PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A2182 putative DNA repair exonuclease
YP_003052204.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pna:Pnap_3543 phosphoesterase, PA-phosphatase related
YP_003052205.1	KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein
YP_003052206.1	PFAM: protein of unknown function DUF1555; KEGG: nmu:Nmul_A1889 hypothetical protein
YP_003052207.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_3689 TonB-dependent receptor
YP_003052209.1	PFAM: RDD domain containing protein; KEGG: swp:swp_4308 membrane protein/domain, putative
YP_003052210.1	PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: mfa:Mfla_2379 phospholipase D/transphosphatidylase
YP_003052211.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mfa:Mfla_2380 endonuclease/exonuclease/phosphatase
YP_003052212.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_003052213.1	converts dATP to dAMP and pyrophosphate
YP_003052214.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_003052215.1	KEGG: csa:Csal_1992 hypothetical protein
YP_003052216.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_003052217.1	PFAM: protein of unknown function DUF502; KEGG: mfa:Mfla_2385 hypothetical protein
YP_003052218.1	TIGRFAM: regulatory protein, FmdB family; KEGG: mfa:Mfla_2386 hypothetical protein
YP_003052219.1	PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_5956 electron transfer flavoprotein alpha subunit
YP_003052220.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_5957 electron transfer flavoprotein alpha/beta-subunit
YP_003052221.1	KEGG: bph:Bphy_5958 leucine-rich repeat-containing protein
YP_003052222.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bph:Bphy_5959 hypothetical protein
YP_003052223.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bph:Bphy_5960 NADH:flavin oxidoreductase/NADH oxidase
YP_003052224.1	PFAM: amino acid permease-associated region; KEGG: mfa:Mfla_0446 amino acid permease-associated region
YP_003052225.1	KEGG: pca:Pcar_0941 hypothetical protein
YP_003052228.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0445 two component LuxR family transcriptional regulator
YP_003052229.1	KEGG: mfa:Mfla_0444 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003052230.1	KEGG: mfa:Mfla_0443 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_003052231.1	KEGG: mfa:Mfla_0546 hypothetical protein
YP_003052232.1	KEGG: mfa:Mfla_0442 hypothetical protein
YP_003052233.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0441 ferredoxin
YP_003052234.1	KEGG: mfa:Mfla_0440 hypothetical protein
YP_003052235.1	PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mfa:Mfla_0439 aminomethyltransferase
YP_003052236.1	KEGG: mfa:Mfla_2628 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; NMT1/THI5 like domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003052237.1	PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cti:RALTA_A0497 putative sensor histidine kinase
YP_003052238.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: tmz:Tmz1t_1421 two component transcriptional regulator, winged helix family
YP_003052239.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: asa:ASA_4171 hypothetical protein
YP_003052240.1	KEGG: abu:Abu_0949 hypothetical protein
YP_003052241.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A0871 LysR family transcriptional regulator
YP_003052242.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afw:Anae109_3255 short-chain dehydrogenase/reductase SDR
YP_003052243.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: dac:Daci_5138 alpha/beta hydrolase domain-containing protein
YP_003052244.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1564 multidrug efflux system transmembrane protein
YP_003052245.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mms:mma_1565 multidrug-efflux system protein
YP_003052246.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mms:mma_1566 outer-membrane drug efflux protein
YP_003052247.1	PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_1217 transcription activator, effector binding
YP_003052249.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_2424 single-strand binding protein
YP_003052250.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: mfa:Mfla_2425 major facilitator transporter
YP_003052251.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: mfa:Mfla_2426 excinuclease ABC subunit A
YP_003052252.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: cvi:CV_0094 hypothetical protein
YP_003052253.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_003052254.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: mfa:Mfla_2445 shikimate dehydrogenase
YP_003052255.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: mfa:Mfla_2446 rhodanese-like protein
YP_003052256.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mfa:Mfla_2447 L-glutamine synthetase
YP_003052257.1	KEGG: mfa:Mfla_2448 hypothetical protein
YP_003052258.1	PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: mfa:Mfla_2449 signal transduction histidine kinase, nitrogen specific, NtrB
YP_003052259.1	KEGG: mfa:Mfla_2450 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase
YP_003052260.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: lpp:lpp2907 hypothetical protein
YP_003052261.1	KEGG: pfl:PFL_4147 putative lipoprotein
YP_003052262.1	KEGG: mfa:Mfla_2453 hypothetical protein
YP_003052263.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_003052264.1	TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; KEGG: mfa:Mfla_2455 3-dehydroquinate synthase
YP_003052265.1	PFAM: shikimate kinase; KEGG: mfa:Mfla_2456 shikimate kinase
YP_003052266.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_2457 type II and III secretion system protein
YP_003052267.1	PFAM: Pilus assembly protein PilP; KEGG: mfa:Mfla_2458 type IV pilus assembly protein PilP
YP_003052268.1	PFAM: Pilus assembly protein PilO; KEGG: mfa:Mfla_2459 pilus assembly protein, PilO
YP_003052269.1	PFAM: Fimbrial assembly family protein; KEGG: mfa:Mfla_2460 fimbrial assembly
YP_003052270.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: mfa:Mfla_2461 type IV pilus assembly protein PilM
YP_003052271.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mfa:Mfla_2462 penicillin-binding protein 1A
YP_003052272.1	KEGG: mfa:Mfla_2463 hypothetical protein
YP_003052273.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_003052274.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: mfa:Mfla_2465 indole-3-glycerol phosphate synthase
YP_003052275.1	KEGG: mfa:Mfla_2466 hypothetical protein
YP_003052276.1	KEGG: mfa:Mfla_2467 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like
YP_003052277.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_003052278.1	KEGG: mfa:Mfla_2471 anthranilate synthase, component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_003052279.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_003052280.1	KEGG: mfa:Mfla_2472 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase
YP_003052281.1	KEGG: mfa:Mfla_2473 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like
YP_003052282.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_003052283.1	KEGG: mfa:Mfla_2475 hypothetical protein
YP_003052284.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: xcv:XCV0944 protein methyltransferase HemK
YP_003052285.1	KEGG: pol:Bpro_2033 hypothetical protein
YP_003052286.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: mfa:Mfla_2479 carbonic anhydrase family 3
YP_003052287.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_003052288.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: mfa:Mfla_2481 methionine biosynthesis MetW
YP_003052289.1	KEGG: mfa:Mfla_2482 hypothetical protein
YP_003052290.1	PFAM: major facilitator superfamily MFS_1; KEGG: tau:Tola_0796 AmpG-related permease
YP_003052291.1	KEGG: mfa:Mfla_2484 exodeoxyribonuclease III (xth); TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_003052292.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_003052293.1	KEGG: mfa:Mfla_2486 G/U mismatch-specific uracil-DNA glycosylase
YP_003052294.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_003052295.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_003052296.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_003052297.1	functions in MreBCD complex in some organisms
YP_003052298.1	TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: mfa:Mfla_2492 rod shape-determining protein MreC
YP_003052299.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: mfa:Mfla_2493 rod shape-determining protein MreD
YP_003052300.1	KEGG: mfa:Mfla_2494 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_003052301.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: mfa:Mfla_2495 rod shape-determining protein RodA
YP_003052302.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mfa:Mfla_2496 rare lipoprotein A
YP_003052303.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mfa:Mfla_2497 penicillin-binding protein 6
YP_003052304.1	PFAM: aminotransferase class IV; KEGG: nmu:Nmul_A1990 aminotransferase, class IV
YP_003052305.1	PFAM: protein of unknown function DUF493; KEGG: mfa:Mfla_2499 hypothetical protein
YP_003052306.1	KEGG: mfa:Mfla_2500 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase
YP_003052307.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_003052308.1	KEGG: pna:Pnap_0404 hypothetical protein
YP_003052310.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator
YP_003052313.1	KEGG: mfa:Mfla_2314 pyrrolo-quinoline quinone; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone
YP_003052314.1	KEGG: mfa:Mfla_2659 hypothetical protein
YP_003052315.1	KEGG: hypothetical protein
YP_003052317.1	PFAM: phosphoribosylglycinamide synthetase; KEGG: aha:AHA_0840 phosphoribosylamine--glycine ligase
YP_003052318.1	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mfa:Mfla_1425 methyltransferase small
YP_003052319.1	KEGG: mfa:Mfla_1424 hypothetical protein
YP_003052320.1	PFAM: copper resistance protein CopC; KEGG: mno:Mnod_6630 copper resistance protein CopC
YP_003052321.1	KEGG: mfa:Mfla_1430 copper resistance D
YP_003052322.1	KEGG: mfa:Mfla_1431 hypothetical protein
YP_003052323.1	PFAM: cytochrome c class I; KEGG: mfa:Mfla_1432 cytochrome c, class I
YP_003052324.1	PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: mfa:Mfla_1433 cytochrome c oxidase, mono-heme subunit/FixO
YP_003052325.1	PFAM: cytochrome c oxidase subunit I; KEGG: mfa:Mfla_1434 cytochrome c oxidase, subunit I
YP_003052326.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; KEGG: mfa:Mfla_1435 hypothetical protein
YP_003052327.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_1419 alpha amylase, catalytic region
YP_003052328.1	KEGG: mfa:Mfla_1418 trehalose synthase-like protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain
YP_003052329.1	KEGG: mfa:Mfla_1417 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain
YP_003052330.1	KEGG: mfa:Mfla_1416 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003052332.1	KEGG: kpn:KPN_03171 hypothetical protein
YP_003052333.1	KEGG: rso:RS05792 hypothetical protein
YP_003052334.1	KEGG: GE14936 gene product from transcript GE14936-RA
YP_003052335.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: har:HEAR3280 hypothetical protein
YP_003052337.1	KEGG: reu:Reut_B5082 Ku; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein
YP_003052338.1	TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; mRNA capping enzyme; KEGG: psb:Psyr_3245 ATP-dependent DNA ligase
YP_003052339.1	KEGG: bxe:Bxe_C0169 hypothetical protein
YP_003052340.1	KEGG: bxe:Bxe_B1651 hypothetical protein
YP_003052342.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mfa:Mfla_2504 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_003052343.1	PFAM: histidine triad (HIT) protein; KEGG: mfa:Mfla_2506 histidine triad (HIT) protein
YP_003052344.1	KEGG: rpi:Rpic_0185 putative ferredoxin 2Fe-2S protein
YP_003052345.1	TIGRFAM: TonB family protein; KEGG: mfa:Mfla_2507 TonB-like protein
YP_003052346.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mfa:Mfla_2508 UDP-N-acetylmuramate
YP_003052347.1	PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: gme:Gmet_2417 diguanylate phosphodiesterase
YP_003052348.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_003052349.1	PFAM: protein of unknown function DUF125 transmembrane; KEGG: tbd:Tbd_0236 hypothetical protein
YP_003052350.1	KEGG: mfa:Mfla_2510 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_003052351.1	PFAM: protein of unknown function DUF526; KEGG: mfa:Mfla_2511 hypothetical protein
YP_003052352.1	KEGG: mfa:Mfla_2512 hypothetical protein
YP_003052353.1	PFAM: nitrogen regulatory protein P-II; KEGG: mfa:Mfla_2513 nitrogen regulatory protein P-II
YP_003052354.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mfa:Mfla_2514 ammonium transporter
YP_003052355.1	TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: mfa:Mfla_2516 glutamate--cysteine ligase GshA
YP_003052356.1	KEGG: mfa:Mfla_2517 glutathione synthase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein
YP_003052357.1	PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: mfa:Mfla_2518 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
YP_003052358.1	KEGG: mfa:Mfla_2519 hypothetical protein
YP_003052359.1	KEGG: mfa:Mfla_2520 hypothetical protein
YP_003052360.1	KEGG: mfa:Mfla_2521 hypothetical protein
YP_003052361.1	KEGG: mfa:Mfla_2522 methylation
YP_003052362.1	KEGG: mms:mma_3360 type IV pilus biogenesis protein PilE
YP_003052364.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mfa:Mfla_2443 diaminopimelate decarboxylase
YP_003052365.1	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: mfa:Mfla_2434 formyltetrahydrofolate deformylase
YP_003052366.1	KEGG: mfa:Mfla_2433 hypothetical protein
YP_003052367.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: mfa:Mfla_2432 adenosylcobinamide-phosphate synthase
YP_003052368.1	KEGG: mfa:Mfla_2431 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein
YP_003052369.1	PFAM: DoxX family protein; KEGG: mfa:Mfla_2430 DoxX
YP_003052371.1	PFAM: GCN5-related N-acetyltransferase; KEGG: tbd:Tbd_1275 hypothetical protein
YP_003052372.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mfa:Mfla_2524 putative formaldehyde-activating enzyme
YP_003052373.1	KEGG: mfa:Mfla_1297 hypothetical protein
YP_003052374.1	TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: mfa:Mfla_1992 sulphate transporter
YP_003052375.1	KEGG: mfa:Mfla_2525 A/G-specific DNA-adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_003052376.1	PFAM: AsmA family protein; KEGG: mfa:Mfla_2526 AsmA
YP_003052377.1	PFAM: Exopolysaccharide synthesis ExoD; KEGG: sme:SMc00353 putative transmembrane protein
YP_003052378.1	KEGG: mfa:Mfla_2527 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_003052379.1	PFAM: protein of unknown function DUF937; KEGG: mfa:Mfla_2528 hypothetical protein
YP_003052380.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: mfa:Mfla_2529 pseudouridine synthase, Rsu
YP_003052381.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_003052382.1	KEGG: maq:Maqu_0293 hypothetical protein
YP_003052383.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; KEGG: hch:HCH_06616 short chain dehydrogenase
YP_003052384.1	KEGG: hch:HCH_06615 hypothetical protein
YP_003052385.1	PFAM: AMP-dependent synthetase and ligase; KEGG: psa:PST_0910 long-chain-fatty-acid--CoA ligase, putative
YP_003052386.1	KEGG: psa:PST_0911 hypothetical protein
YP_003052387.1	KEGG: mca:MCA3097 hypothetical protein
YP_003052388.1	KEGG: mca:MCA3098 hypothetical protein
YP_003052389.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mca:MCA3099 sensor histidine kinase
YP_003052390.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: glo:Glov_3076 two component, sigma54 specific, transcriptional regulator, Fis family
YP_003052391.1	KEGG: mfa:Mfla_2531 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: ribosomal RNA adenine methylase transferase
YP_003052392.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_2534 type I secretion outer membrane protein, TolC
YP_003052393.1	PFAM: isochorismatase hydrolase; KEGG: mfa:Mfla_2535 isochorismatase hydrolase
YP_003052394.1	KEGG: tbd:Tbd_1936 hypothetical protein
YP_003052395.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: mfa:Mfla_0310 putative signal peptide protein
YP_003052396.1	KEGG: mfa:Mfla_0308 hypothetical protein
YP_003052397.1	PFAM: regulatory protein TetR; KEGG: mfa:Mfla_0309 TetR family transcriptional regulator
YP_003052398.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mfa:Mfla_2536 3-deoxy-D-manno-octulosonic-acid transferase-like protein
YP_003052399.1	KEGG: mfa:Mfla_2541 ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit
YP_003052400.1	KEGG: mfa:Mfla_2542 hypothetical protein
YP_003052401.1	PFAM: Patatin; KEGG: hiq:CGSHiGG_03920 patatin
YP_003052402.1	KEGG: vei:Veis_4659 hypothetical protein
YP_003052403.1	KEGG: msl:Msil_2450 hypothetical protein
YP_003052404.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpt:Rpal_4641 binding-protein-dependent transport systems inner membrane component
YP_003052405.1	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bav:BAV1990 ABC transporter, substrate-binding protein
YP_003052406.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce1865 ABC transporter ATP-binding protein
YP_003052407.1	PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pfs:PFLU2240 putative regulatory protein
YP_003052408.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xcv:XCV2346 AraC family transcriptional regulator
YP_003052409.1	TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: she:Shewmr4_3500 alkylhydroperoxidase
YP_003052410.1	PFAM: peptidase S15; KEGG: rhi:NGR_b14550 hypothetical protein
YP_003052411.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein
YP_003052412.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 AraC family transcriptional regulator
YP_003052413.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4488 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_003052414.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pen:PSEEN1324 LysR family transcriptional regulator
YP_003052415.1	PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_0582 alpha/beta hydrolase fold
YP_003052416.1	KEGG: kpn:KPN_00005 hypothetical protein
YP_003052417.1	PFAM: protein of unknown function DUF1294; Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: neu:NE0717 cold shock DNA-binding domain-containing protein
YP_003052418.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: net:Neut_0492 transport-associated
YP_003052420.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: azo:azo3667 hypothetical protein
YP_003052421.1	KEGG: pne:Pnec_0970 putative transmembrane protein
YP_003052424.1	KEGG: pna:Pnap_1316 cyclic nucleotide-binding domain-containing protein
YP_003052425.1	KEGG: dar:Daro_2048 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003052426.1	SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bxe:Bxe_C0542 Crp/FNR family transcriptional regulator
YP_003052427.1	KEGG: spc:Sputcn32_3380 hypothetical protein
YP_003052428.1	PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: tbd:Tbd_1304 cyclic beta 1-2 glucan synthetase
YP_003052429.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_0312 MarR family transcriptional regulator
YP_003052430.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: cvi:CV_2466 iron-chelator utilization protein
YP_003052431.1	KEGG: bra:BRADO1824 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein
YP_003052432.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B1426 (acyl-carrier protein) phosphodiesterase
YP_003052433.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mms:mma_1232 GntR family transcriptional regulator
YP_003052434.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gur:Gura_3497 RND efflux system outer membrane lipoprotein
YP_003052435.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: cja:CJA_1474 AcrB/AcrD/AcrF family protein
YP_003052436.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xcb:XC_1432 multidrug resistance protein
YP_003052437.1	PFAM: regulatory protein TetR; KEGG: azo:azo0243 TetR family transcriptional regulator
YP_003052438.1	KEGG: aav:Aave_4730 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003052439.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ppw:PputW619_3232 diguanylate phosphodiesterase
YP_003052440.1	PFAM: Catalase domain protein; KEGG: mfa:Mfla_2572 catalase-like protein
YP_003052441.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: psp:PSPPH_3645 MarR family transcriptional regulator
YP_003052442.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vha:VIBHAR_06279 hypothetical protein
YP_003052443.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sml:Smlt1764 putative LysR-family transcriptional regulator
YP_003052444.1	PFAM: Pirin domain protein; KEGG: cti:RALTA_A2205 putative transcription cofactor, metal binding pirin domain
YP_003052445.1	PFAM: NmrA family protein; KEGG: sse:Ssed_2152 hypothetical protein
YP_003052446.1	PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2476 isochorismatase superfamily hydrolase
YP_003052447.1	PFAM: Amidohydrolase 3; KEGG: avn:Avin_42330 metallo-dependent hydrolase
YP_003052448.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: pla:Plav_2384 protein of unknown function DUF894 DitE
YP_003052449.1	KEGG: xcv:XCV2194 hypothetical protein
YP_003052450.1	KEGG: xcv:XCV2195 hypothetical protein
YP_003052451.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bur:Bcep18194_C6909 peptidase M17, leucyl aminopeptidase-like
YP_003052452.1	KEGG: gsu:GSU0801 hypothetical protein
YP_003052453.1	KEGG: mfa:Mfla_2178 hypothetical protein
YP_003052454.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eba:ebA1369 LysR family transcriptional regulator
YP_003052455.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: noc:Noc_1918 transcription elongation factor
YP_003052456.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_0687 ATPase
YP_003052457.1	KEGG: mfa:Mfla_0688 hypothetical protein
YP_003052458.1	KEGG: mfa:Mfla_0689 MxaA protein, putative
YP_003052459.1	SMART: von Willebrand factor type A; KEGG: mfa:Mfla_0690 von Willebrand factor, type A
YP_003052460.1	KEGG: mfa:Mfla_0691 hypothetical protein
YP_003052461.1	KEGG: mfa:Mfla_0692 von Willebrand factor, type A
YP_003052462.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_3020 zinc-binding alcohol dehydrogenase family protein
YP_003052463.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_14681 putative transcriptional regulator
YP_003052464.1	PFAM: glycosyl transferase family 39; KEGG: pap:PSPA7_5537 hypothetical protein
YP_003052465.1	KEGG: tgr:Tgr7_0488 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein
YP_003052466.1	PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: xom:XOO_1366 chemotaxis-specific methylesterase
YP_003052467.1	KEGG: tmz:Tmz1t_1321 CheD
YP_003052468.1	KEGG: psb:Psyr_0783 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type
YP_003052469.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: azo:azo0405 positive regulator of CheA protein activity
YP_003052470.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: xac:XAC2866 chemotaxis protein
YP_003052471.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rfr:Rfer_0903 CheW protein
YP_003052472.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: xac:XAC2866 chemotaxis protein
YP_003052473.1	KEGG: xca:xccb100_0402 hypothetical protein
YP_003052474.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: psb:Psyr_0784 CheW-like protein
YP_003052475.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: sdn:Sden_3297 chemotaxis sensory transducer
YP_003052476.1	PFAM: CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: azo:azo0408 putative chemotaxis protein histidine kinase
YP_003052477.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: asa:ASA_3265 sulfate transporter/antisigma-factor antagonist STAS
YP_003052478.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: psp:PSPPH_0807 chemotaxis protein CheY
YP_003052479.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: aha:AHA_1039 methyl-accepting chemotaxis protein, putative
YP_003052480.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_1359 RND efflux system, outer membrane lipoprotein, NodT
YP_003052481.1	MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery
YP_003052482.1	MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery
YP_003052483.1	PFAM: regulatory protein TetR; KEGG: neu:NE1114 TetR family regulatory protein
YP_003052484.1	KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003052485.1	PFAM: protein of unknown function DUF399; KEGG: acp:A2cp1_3179 protein of unknown function DUF399
YP_003052488.1	KEGG: sil:SPO3845 hypothetical protein
YP_003052489.1	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bpy:Bphyt_3970 short-chain dehydrogenase/reductase SDR
YP_003052490.1	PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4475 transcriptional regulator
YP_003052491.1	KEGG: tgr:Tgr7_1420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein
YP_003052492.1	PFAM: protein of unknown function DUF45; KEGG: pna:Pnap_3055 hypothetical protein
YP_003052493.1	KEGG: cps:CPS_1622 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3; PAS domain containing protein
YP_003052494.1	KEGG: mfa:Mfla_1841 hypothetical protein
YP_003052495.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_2592 LysR family transcriptional regulator
YP_003052496.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein
YP_003052497.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: har:HEAR1448 hypothetical protein
YP_003052498.1	KEGG: aav:Aave_0393 hypothetical protein
YP_003052499.1	PFAM: MgtC/SapB transporter; KEGG: mca:MCA0957 MgtC family protein
YP_003052500.1	KEGG: mfa:Mfla_1134 chaperone protein
YP_003052501.1	PFAM: putative exonuclease RdgC; KEGG: mms:mma_1176 recombination associated protein
YP_003052502.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aav:Aave_3990 transglutaminase domain-containing protein
YP_003052503.1	KEGG: mfa:Mfla_1053 hypothetical protein
YP_003052504.1	PFAM: protein of unknown function UPF0061; KEGG: mfa:Mfla_1788 hypothetical protein
YP_003052505.1	PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein
YP_003052506.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: mfa:Mfla_2502 hypothetical protein
YP_003052507.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mfa:Mfla_2140 cold-shock DNA-binding protein family protein
YP_003052508.1	TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: eba:ebA1871 translation initiation factor IF-1
YP_003052511.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_2370 AraC family transcriptional regulator
YP_003052512.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_C1141 RND efflux system membrane fusion protein
YP_003052513.1	PFAM: acriflavin resistance protein; KEGG: rpb:RPB_3609 acriflavin resistance protein
YP_003052514.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mpt:Mpe_A3396 trypsin-like serine protease
YP_003052515.1	PFAM: protein of unknown function DUF748; KEGG: mfa:Mfla_1356 hypothetical protein
YP_003052516.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pfs:PFLU1042 RNA polymerase sigma factor
YP_003052517.1	PFAM: FecR protein; KEGG: avn:Avin_17700 anti-sigma factor, FecR family
YP_003052518.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pen:PSEEN0276 TonB-dependent receptor
YP_003052520.1	PFAM: dienelactone hydrolase; KEGG: mfa:Mfla_2602 carboxymethylenebutenolidase
YP_003052521.1	PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_0016 nucleoid protein HU beta subunit
YP_003052522.1	KEGG: mfa:Mfla_2670 hypothetical protein
YP_003052523.1	TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A
YP_003052524.1	PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger
YP_003052525.1	KEGG: mfa:Mfla_0730 hypothetical protein
YP_003052526.1	PFAM: PfkB domain protein; KEGG: mfa:Mfla_2609 PfkB
YP_003052527.1	KEGG: mfa:Mfla_2610 sucrose-phosphate synthase, glycosyltransferase region; TIGRFAM: sucrose-phosphate synthase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; glycosyl transferase group 1; Haloacid dehalogenase domain protein hydrolase type 3
YP_003052528.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_2611 alpha amylase, catalytic region
YP_003052529.1	PFAM: MscS Mechanosensitive ion channel; KEGG: tbd:Tbd_0499 mechanosensitive ion channel
YP_003052531.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2622 major facilitator transporter
YP_003052532.1	KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003052534.1	KEGG: mfa:Mfla_2626 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003052535.1	KEGG: mfa:Mfla_2629 hypothetical protein
YP_003052536.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: azo:azo0151 putative transcriptional repressor
YP_003052537.1	PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: azo:azo0150 bifunctional Aas protein
YP_003052538.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_2630 lysophospholipid transporter LplT
YP_003052539.1	PFAM: Entericidin EcnAB; KEGG: mfa:Mfla_2631 entericidin EcnAB
YP_003052540.1	KEGG: cak:Caul_4884 serralysin; PFAM: peptidase M10A and M12B matrixin and adamalysin; Hemolysin-type calcium-binding region; SMART: peptidase metallopeptidase
YP_003052541.1	TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; KEGG: mfa:Mfla_0021 coenzyme PQQ biosynthesis protein A
YP_003052542.1	PFAM: DoxX family protein; KEGG: mfa:Mfla_2633 DoxX
YP_003052543.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mfa:Mfla_2634 extradiol ring-cleavage dioxygenase III subunit B
YP_003052544.1	PFAM: MltA domain protein; 3D domain protein; KEGG: mfa:Mfla_2635 MltA
YP_003052545.1	PFAM: ApaG domain protein; KEGG: tbd:Tbd_2231 ApaG
YP_003052546.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_003052547.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mfa:Mfla_2638 thiamine biosynthesis protein ThiS
YP_003052548.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_2639 tetratricopeptide TPR_2
YP_003052549.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; KEGG: mfa:Mfla_2640 DegT/DnrJ/EryC1/StrS aminotransferase
YP_003052550.1	KEGG: dac:Daci_0615 acyl carrier protein-related protein
YP_003052551.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mfa:Mfla_2642 3-oxoacyl-(acyl-carrier protein) synthase
YP_003052552.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pfl:PFL_1658 short chain dehydrogenase/reductase family oxidoreductase
YP_003052553.1	KEGG: mfa:Mfla_2645 acetyltransferase
YP_003052554.1	TIGRFAM: methyltransferase FkbM family; KEGG: pfl:PFL_1662 methyltransferase FkbM family protein
YP_003052555.1	PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: sdn:Sden_3114 Rieske (2Fe-2S) region
YP_003052556.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: cti:RALTA_B1096 conserved hypothetical protein; putative anhydrase/acetyltransferase motif
YP_003052557.1	TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_2400 methyltransferase FkbM
YP_003052558.1	PFAM: CsbD family protein; KEGG: mfa:Mfla_2651 CsbD-like protein
YP_003052559.1	KEGG: mpt:Mpe_A1028 hypothetical protein
YP_003052561.1	KEGG: mfa:Mfla_1553 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein
YP_003052563.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bav:BAV3013 rubredoxin
YP_003052564.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mfa:Mfla_2662 phosphomethylpyrimidine kinase
YP_003052565.1	KEGG: mfa:Mfla_2663 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_003052566.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_003052567.1	PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: dar:Daro_0217 glutamate synthase (NADH) large subunit
YP_003052568.1	TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eba:ebA2251 glutamate synthase subunit beta
YP_003052569.1	KEGG: mfa:Mfla_2666 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_003052570.1	KEGG: mfa:Mfla_2672 replication restart DNA helicase PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein
YP_003052571.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_003052572.1	PFAM: Sporulation domain protein; KEGG: mfa:Mfla_2674 sporulation related
YP_003052573.1	PFAM: DSBA oxidoreductase; KEGG: mfa:Mfla_2675 DsbA oxidoreductase
YP_003052574.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mfa:Mfla_2676 short chain dehydrogenase
YP_003052575.1	KEGG: mfa:Mfla_2737 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_003052576.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_003052577.1	KEGG: mfa:Mfla_2742 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein
YP_003052578.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_003052579.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_003052580.1	TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: mfa:Mfla_2745 ATP synthase F1, gamma subunit
YP_003052581.1	KEGG: mfa:Mfla_2746 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein
YP_003052582.1	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mfa:Mfla_2747 ATP synthase F1, delta subunit
YP_003052583.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_003052584.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_003052585.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_003052586.1	PFAM: ATP synthase I chain; KEGG: mfa:Mfla_2751 ATP synthase protein I
YP_003052587.1	KEGG: mfa:Mfla_2752 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003052588.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2753 chromosome segregation ATPase
YP_003052589.1	TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mfa:Mfla_2754 methyltransferase GidB
YP_003052590.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_003052591.1	TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: mfa:Mfla_2757 tRNA modification GTPase TrmE
YP_003052592.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: mfa:Mfla_2758 protein translocase subunit YidC
YP_003052593.1	PFAM: protein of unknown function DUF37; KEGG: mfa:Mfla_2759 hypothetical protein
YP_003052594.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_003052595.1	PFAM: integrase family protein; KEGG: bpy:Bphyt_7273 integrase family protein
YP_003052596.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_7399 XRE family transcriptional regulator
YP_003052597.1	KEGG: bav:BAV0381 plasmid-related protein
YP_003052598.1	KEGG: atc:AGR_C_3184 hypothetical protein
YP_003052600.1	PFAM: initiator RepB protein; KEGG: bmj:BMULJ_05362 replication protein
YP_003052601.1	KEGG: GI24167 gene product from transcript GI24167-RA
YP_003052604.1	KEGG: xfa:XFa0050 hypothetical protein
YP_003052605.1	KEGG: ppf:Pput_3809 ribonuclease
YP_003052606.1	KEGG: mms:mma_3033 hypothetical protein
YP_003052609.1	PFAM: Relaxase/mobilization nuclease family protein; KEGG: bvi:Bcep1808_7634 relaxase/mobilization nuclease family protein
YP_003052610.1	KEGG: vha:VIBHAR_06812 hypothetical protein
YP_003052611.1	KEGG: reh:H16_B0351 hypothetical protein
YP_003052612.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein
YP_003052613.1	PFAM: peptidase S24 and S26 domain protein; KEGG: lhk:LHK_01580 UmuD protein
YP_003052614.1	PFAM: protein of unknown function DUF159; KEGG: rfr:Rfer_4344 hypothetical protein
YP_003052615.1	PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_A4124 LuxR family transcriptional regulator
YP_003052616.1	KEGG: rme:Rmet_2824 hypothetical protein
YP_003052619.1	KEGG: bpy:Bphyt_7384 hypothetical protein
YP_003052620.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: reh:PHG325 putative DNA methyltransferase
YP_003052621.1	KEGG: mpt:Mpe_B0075 hypothetical protein
YP_003052623.1	KEGG: rpi:Rpic_1543 hypothetical protein
YP_003052625.1	KEGG: afr:AFE_1099 ChpA protein
YP_003052626.1	PFAM: SpoVT/AbrB domain protein; KEGG: ecf:ECH74115_5741 PemI protein 2
YP_003052627.1	KEGG: pin:Ping_2006 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003052628.1	KEGG: abn:AB57_0262 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003052629.1	PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7408 lytic transglycosylase, catalytic
YP_003052630.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: mpt:Mpe_B0340 C-5 cytosine-specific DNA methylase
YP_003052631.1	PFAM: TRAG family protein; KEGG: pna:Pnap_2530 TraG family protein
YP_003052632.1	KEGG: mpt:Mpe_B0159 hypothetical protein
YP_003052633.1	PFAM: domain of unknown function DUF1738; KEGG: lpc:LPC_0184 DNA primase TraC
YP_003052635.1	PFAM: N-6 DNA methylase; helicase domain protein; KEGG: bvi:Bcep1808_7553 helicase domain-containing protein
YP_003052637.1	KEGG: bvi:Bcep1808_5795 putative DNA primase, DNA transfer TraO-like protein
YP_003052642.1	KEGG: ajs:Ajs_4222 hypothetical protein
YP_003052643.1	PFAM: protein of unknown function DUF583; KEGG: bph:Bphy_4734 hypothetical protein
YP_003052644.1	KEGG: GI20420 gene product from transcript GI20420-RA
YP_003052646.1	SMART: AAA ATPase; KEGG: ypi:YpsIP31758_B0025 hypothetical protein
YP_003052647.1	KEGG: sde:Sde_4009 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003052648.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gsu:GSU0106 soj protein
YP_003052650.1	KEGG: afe:Lferr_0274 hypothetical protein
YP_003052651.1	PFAM: conjugation TrbI family protein; KEGG: eba:p2B8 conjugal transfer protein TrbI
YP_003052652.1	PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: ajs:Ajs_4269 conjugal transfer protein TrbG
YP_003052653.1	PFAM: Conjugal transfer protein; KEGG: ppr:PBPRB1604 conjugal transfer protein TrbF
YP_003052654.1	TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: aav:Aave_0395 TrbL/VirB6 plasmid conjugal transfer protein
YP_003052655.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: kpe:KPK_1290 P-type conjugative transfer protein TrbJ
YP_003052656.1	PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: reu:Reut_D6505 CagE, TrbE, VirB component of type IV transporter system
YP_003052657.1	KEGG: avi:Avi_8332 conjugal transfer protein
YP_003052658.1	PFAM: Conjugal transfer protein TrbC; KEGG: pna:Pnap_4196 conjugal transfer protein TrbC
YP_003052659.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dps:DPPB12 conjugal transfer protein TrbB
YP_003052661.1	KEGG: ppg:PputGB1_0812 OmpA/MotB domain-containing protein
YP_003052662.1	KEGG: pol:Bpro_5453 hypothetical protein
YP_003052663.1	TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: type II and III secretion system protein; Secretin domain protein; KEGG: pol:Bpro_5240 type II and III secretion system protein
YP_003052664.1	KEGG: pol:Bpro_5450 hypothetical protein
YP_003052665.1	TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: pol:Bpro_5242 hypothetical protein
YP_003052666.1	PFAM: type II secretion system protein E; KEGG: pol:Bpro_5243 type II secretion system protein E
YP_003052667.1	PFAM: type II secretion system protein; KEGG: pol:Bpro_5244 type II secretion system protein
YP_003052668.1	PFAM: PilS domain protein; KEGG: pol:Bpro_5245 type IV pilus biogenesis protein, putative
YP_003052669.1	PFAM: type II secretion system protein E; KEGG: pol:Bpro_5246 type II secretion system protein E
YP_003052670.1	PFAM: PilM inner membrane family protein; KEGG: pol:Bpro_5444 PilM protein, putative
YP_003052671.1	PFAM: type II secretion system protein E; KEGG: pol:Bpro_5248 type II secretion system protein E
YP_003052672.1	KEGG: pol:Bpro_5249 methylation
YP_003052673.1	KEGG: bte:BTH_II0776 type IV prepilin
YP_003056831.1	KEGG: asa:ASA_1269 transcriptional protein
YP_003056833.1	KEGG: sde:Sde_2755 hypothetical protein
YP_003056834.1	PFAM: integrase family protein; KEGG: nmu:Nmul_A2184 phage integrase
YP_003056835.1	KEGG: net:Neut_1485 SppA protein
YP_003056836.1	PFAM: Zonular occludens toxin; KEGG: rpi:Rpic_1399 zonular occludens toxin
YP_003056837.1	KEGG: dia:Dtpsy_0843 hypothetical protein
YP_003056838.1	KEGG: rpi:Rpic_2546 hypothetical protein
YP_003056841.1	KEGG: mfa:Mfla_1456 hypothetical protein
YP_003056843.1	KEGG: bpy:Bphyt_0267 hypothetical protein