-- dump date 20140619_145229 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 754477000001 SEQ_END SEQ_END NC_017856.1 2697465 2697465 DR NC_017856.1; contig end 2697465..2697465 Methylophaga frappieri 754477000002 SEQ_END SEQ_END NC_017858.1 47825 47825 DR NC_017858.1; contig end 47825..47825 Methylophaga frappieri YP_006291873.1 CDS Q7C_1 NC_017856.1 134 523 D PFAM: Pterin 4 alpha carbinolamine dehydratase; Pterin-4-alpha-carbinolamine dehydratase 134..523 Methylophaga frappieri 12843555 YP_006291874.1 CDS Q7C_2 NC_017856.1 537 743 D hypothetical protein 537..743 Methylophaga frappieri 12843557 YP_006291875.1 CDS Q7C_3 NC_017856.1 746 1132 D PFAM: Uncharacterized protein conserved in bacteria (DUF2237); hypothetical protein 746..1132 Methylophaga frappieri 12843559 YP_006291876.1 CDS Q7C_4 NC_017856.1 1139 3067 R PFAM: Type III restriction enzyme, res subunit; DEAD_2; DinG family ATP-dependent helicase YoaA complement(1139..3067) Methylophaga frappieri 12843561 YP_006291877.1 CDS Q7C_5 NC_017856.1 3067 3963 R PFAM: E3 Ubiquitin ligase; E3 Ubiquitin ligase complement(3067..3963) Methylophaga frappieri 12843638 YP_006291878.1 CDS Q7C_6 NC_017856.1 3963 4538 R PFAM: LemA family; LemA complement(3963..4538) Methylophaga frappieri 12843640 YP_006291879.1 CDS Q7C_7 NC_017856.1 4567 5049 R hypothetical protein complement(4567..5049) Methylophaga frappieri 12843648 YP_006291880.1 CDS Q7C_8 NC_017856.1 5213 5818 R PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme complement(5213..5818) Methylophaga frappieri 12843650 YP_006291881.1 CDS Q7C_9 NC_017856.1 5890 6279 D PFAM: Bacterial-like globin; hypothetical protein 5890..6279 Methylophaga frappieri 12843553 YP_006291882.1 CDS Q7C_10 NC_017856.1 6282 7028 D PFAM: Probable molybdopterin binding domain; molybdopterin binding domain-containing protein 6282..7028 Methylophaga frappieri 12842591 YP_006291883.1 CDS Q7C_11 NC_017856.1 7013 7927 R PFAM: Membrane transport protein; permease complement(7013..7927) Methylophaga frappieri 12842592 YP_006291884.1 CDS Q7C_12 NC_017856.1 7947 8096 R hypothetical protein complement(7947..8096) Methylophaga frappieri 12842593 YP_006291885.1 CDS Q7C_13 NC_017856.1 8119 10017 D PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; hypothetical protein 8119..10017 Methylophaga frappieri 12842594 YP_006291886.1 CDS Q7C_14 NC_017856.1 10024 10689 D PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein 10024..10689 Methylophaga frappieri 12842595 YP_006291887.1 CDS Q7C_15 NC_017856.1 10686 11864 R PFAM: Outer membrane efflux protein; outer membrane protein complement(10686..11864) Methylophaga frappieri 12842596 YP_006291888.1 CDS Q7C_16 NC_017856.1 11951 14746 R PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; RNA polymerase associated protein RapA complement(11951..14746) Methylophaga frappieri 12842597 YP_006291889.1 CDS Q7C_17 NC_017856.1 14842 15417 D PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 14842..15417 Methylophaga frappieri 12842598 YP_006291890.1 CDS Q7C_18 NC_017856.1 15414 16049 R methyltransferase-like protein complement(15414..16049) Methylophaga frappieri 12842599 YP_006291891.1 CDS Q7C_19 NC_017856.1 16049 16765 R hypothetical protein complement(16049..16765) Methylophaga frappieri 12842600 YP_006291892.1 CDS Q7C_20 NC_017856.1 16771 17055 R hypothetical protein complement(16771..17055) Methylophaga frappieri 12842601 YP_006291893.1 CDS Q7C_21 NC_017856.1 17076 18368 R PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase complement(17076..18368) Methylophaga frappieri 12842602 YP_006291894.1 CDS Q7C_22 NC_017856.1 18435 18884 R hypothetical protein complement(18435..18884) Methylophaga frappieri 12842603 YP_006291895.1 CDS Q7C_23 NC_017856.1 18912 19343 R hypothetical protein complement(18912..19343) Methylophaga frappieri 12842604 YP_006291896.1 CDS Q7C_24 NC_017856.1 19333 19806 R PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(19333..19806) Methylophaga frappieri 12842605 YP_006291897.1 CDS Q7C_25 NC_017856.1 19765 19884 D hypothetical protein 19765..19884 Methylophaga frappieri 12842606 YP_006291898.1 CDS Q7C_26 NC_017856.1 19996 22077 D PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 19996..22077 Methylophaga frappieri 12842607 YP_006291899.1 CDS Q7C_27 NC_017856.1 22077 22820 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome partitioning protein ParA 22077..22820 Methylophaga frappieri 12842608 YP_006291900.1 CDS Q7C_28 NC_017856.1 22817 25051 R PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; 2-phospho-D-glycerate hydrolyase complement(22817..25051) Methylophaga frappieri 12842609 YP_006291901.1 CDS Q7C_29 NC_017856.1 25099 25392 D PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; RNA binding protein 25099..25392 Methylophaga frappieri 12842610 YP_006291902.1 CDS Q7C_30 NC_017856.1 25423 26022 D PFAM: Nitroreductase family; nitroreductase 25423..26022 Methylophaga frappieri 12842611 YP_006291903.1 CDS Q7C_31 NC_017856.1 26038 26499 D PFAM: Pentapeptide repeats (8 copies); Pentapeptide repeat protein 26038..26499 Methylophaga frappieri 12842612 YP_006291904.1 CDS Q7C_32 NC_017856.1 26628 30518 D PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA; ATP-dependent helicase HrpA 26628..30518 Methylophaga frappieri 12842613 YP_006291905.1 CDS Q7C_33 NC_017856.1 30635 30751 R hypothetical protein complement(30635..30751) Methylophaga frappieri 12842614 YP_006291906.1 CDS Q7C_34 NC_017856.1 30972 31088 D hypothetical protein 30972..31088 Methylophaga frappieri 12842615 YP_006291907.1 CDS Q7C_35 NC_017856.1 31202 31462 D hypothetical protein 31202..31462 Methylophaga frappieri 12842616 YP_006291908.1 CDS Q7C_36 NC_017856.1 31469 32146 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Two-component system regulatory protein 31469..32146 Methylophaga frappieri 12842617 YP_006291909.1 CDS Q7C_37 NC_017856.1 32520 33491 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 32520..33491 Methylophaga frappieri 12842618 YP_006291910.1 CDS Q7C_38 NC_017856.1 33495 34007 R PFAM: Protein of unknown function (DUF615); hypothetical protein complement(33495..34007) Methylophaga frappieri 12842619 YP_006291911.1 CDS Q7C_39 NC_017856.1 34007 34426 R PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme complement(34007..34426) Methylophaga frappieri 12842620 YP_006291912.1 CDS Q7C_40 NC_017856.1 34426 35466 R PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; anthranilate phosphoribosyltransferase complement(34426..35466) Methylophaga frappieri 12842621 YP_006291913.1 CDS Q7C_41 NC_017856.1 35463 37478 R PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase complement(35463..37478) Methylophaga frappieri 12842622 YP_006291914.1 CDS Q7C_42 NC_017856.1 37465 38229 R PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; cell division protein ZipA complement(37465..38229) Methylophaga frappieri 12842623 YP_006291915.1 CDS Q7C_43 NC_017856.1 38292 38681 D PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; NADPH dependent preQ0 reductase 38292..38681 Methylophaga frappieri 12842624 YP_006291916.1 CDS Q7C_44 NC_017856.1 38685 39980 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY( ) 38685..39980 Methylophaga frappieri 12842625 YP_006291917.1 CDS Q7C_45 NC_017856.1 39973 40725 D PFAM: Etoposide-induced protein 2.4 (EI24); Sulfate transporter, CysZ-type 39973..40725 Methylophaga frappieri 12842626 YP_006291918.1 CDS Q7C_46 NC_017856.1 40709 40921 R PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase complement(40709..40921) Methylophaga frappieri 12842627 YP_006291919.1 CDS Q7C_47 NC_017856.1 40942 42333 R hypothetical protein complement(40942..42333) Methylophaga frappieri 12842628 YP_006291920.1 CDS Q7C_48 NC_017856.1 42444 43577 R PFAM: Aminotransferase class I and II; Aspartate aminotransferase complement(42444..43577) Methylophaga frappieri 12842629 YP_006291921.1 CDS Q7C_49 NC_017856.1 43612 44376 R hypothetical protein complement(43612..44376) Methylophaga frappieri 12842630 YP_006291922.1 CDS Q7C_50 NC_017856.1 44552 44911 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein, DksA/TraR family 44552..44911 Methylophaga frappieri 12842631 YP_006291923.1 CDS Q7C_51 NC_017856.1 44967 49019 R PFAM: Family of unknown function (DUF490); hypothetical protein complement(44967..49019) Methylophaga frappieri 12842632 YP_006291924.1 CDS Q7C_52 NC_017856.1 49016 50746 R PFAM: Surface antigen; outer membrane protein complement(49016..50746) Methylophaga frappieri 12842633 YP_006291925.1 CDS Q7C_53 NC_017856.1 50845 51777 R PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator complement(50845..51777) Methylophaga frappieri 12842634 YP_006291926.1 CDS Q7C_54 NC_017856.1 51939 53459 D PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 51939..53459 Methylophaga frappieri 12842635 YP_006291927.1 CDS Q7C_55 NC_017856.1 53566 55530 D PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-CoA synthetase 53566..55530 Methylophaga frappieri 12842636 YP_006291928.1 CDS Q7C_56 NC_017856.1 55555 55944 D PFAM: S4 domain; Ribosome-associated heat shock protein 55555..55944 Methylophaga frappieri 12842637 YP_006291929.1 CDS Q7C_57 NC_017856.1 55944 56357 D PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; Nucleoside triphosphate pyrophosphohydrolase MazG 55944..56357 Methylophaga frappieri 12842638 YP_006291930.1 CDS Q7C_58 NC_017856.1 56349 58463 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(56349..58463) Methylophaga frappieri 12842639 YP_006291931.1 CDS Q7C_59 NC_017856.1 58529 59422 R PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; Molybdenum cofactor biosynthesis protein MoaA complement(58529..59422) Methylophaga frappieri 12842640 YP_006291932.1 CDS Q7C_60 NC_017856.1 59732 60403 R PFAM: Uncharacterised protein family UPF0005; TEGT family carrier/transport protein complement(59732..60403) Methylophaga frappieri 12842641 YP_006291933.1 CDS Q7C_62 NC_017856.1 60710 62365 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; multi-sensor hybrid histidine kinase complement(60710..62365) Methylophaga frappieri 12842643 YP_006291934.1 CDS Q7C_63 NC_017856.1 62483 63232 R hypothetical protein complement(62483..63232) Methylophaga frappieri 12842644 YP_006291935.1 CDS Q7C_64 NC_017856.1 63274 64935 R PFAM: POTRA domain, ShlB-type; hemolysin activation/secretion protein complement(63274..64935) Methylophaga frappieri 12842645 YP_006291936.1 CDS Q7C_65 NC_017856.1 65059 67311 R LPXTG-motif cell wall anchor domain-containing protein complement(65059..67311) Methylophaga frappieri 12842646 YP_006291937.1 CDS Q7C_66 NC_017856.1 67763 68155 D PFAM: Response regulator receiver domain; response regulator receiver protein 67763..68155 Methylophaga frappieri 12842647 YP_006291938.1 CDS Q7C_67 NC_017856.1 68230 68841 D PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family; Excisionase/Xis, DNA-binding protein 68230..68841 Methylophaga frappieri 12842648 YP_006291939.1 CDS Q7C_68 NC_017856.1 68907 70043 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component hybrid sensor and regulator 68907..70043 Methylophaga frappieri 12842649 YP_006291940.1 CDS Q7C_69 NC_017856.1 70152 70541 R PFAM: Nickel uptake substrate-specific transmembrane region; metal-binding protein complement(70152..70541) Methylophaga frappieri 12842650 YP_006291941.1 CDS Q7C_73 NC_017856.1 71545 73689 D PFAM: Transposase; transposase, TnpA family 71545..73689 Methylophaga frappieri 12842652 YP_006291942.1 CDS Q7C_74 NC_017856.1 73779 74315 R hypothetical protein complement(73779..74315) Methylophaga frappieri 12842653 YP_006291943.1 CDS Q7C_75 NC_017856.1 74327 74722 R nucleic-acid-binding protein, contains PIN domain complement(74327..74722) Methylophaga frappieri 12842654 YP_006291944.1 CDS Q7C_76 NC_017856.1 74719 74970 R regulator of stationary/sporulation gene expression complement(74719..74970) Methylophaga frappieri 12842655 YP_006291945.1 CDS Q7C_77 NC_017856.1 75138 75893 D transposase 75138..75893 Methylophaga frappieri 12842656 YP_006291946.1 CDS Q7C_78 NC_017856.1 75919 78120 D PFAM: Transposase; transposase, TnpA family 75919..78120 Methylophaga frappieri 12842657 YP_006291947.1 CDS Q7C_79 NC_017856.1 78199 79293 R PFAM: Domain of unknown function DUF87; Bipolar DNA helicase complement(78199..79293) Methylophaga frappieri 12842658 YP_006291948.1 CDS Q7C_80 NC_017856.1 79303 80316 R hypothetical protein complement(79303..80316) Methylophaga frappieri 12842659 YP_006291949.1 CDS Q7C_81 NC_017856.1 80700 81758 R PFAM: NAD dependent epimerase/dehydratase family; Nucleoside-diphosphate-sugar epimerase complement(80700..81758) Methylophaga frappieri 12842660 YP_006291950.1 CDS Q7C_82 NC_017856.1 81842 82561 R PFAM: Cyclic nucleotide-binding domain; cAMP-binding protein complement(81842..82561) Methylophaga frappieri 12842661 YP_006291951.1 CDS Q7C_83 NC_017856.1 82818 83426 R PFAM: Domain of unknown function (DUF1989); aminomethyltransferase complement(82818..83426) Methylophaga frappieri 12842662 YP_006291952.1 CDS Q7C_84 NC_017856.1 83423 84139 R PFAM: YqcI/YcgG family; hypothetical protein complement(83423..84139) Methylophaga frappieri 12842663 YP_006291953.1 CDS Q7C_85 NC_017856.1 84456 84569 R hypothetical protein complement(84456..84569) Methylophaga frappieri 12842664 YP_006291954.1 CDS Q7C_86 NC_017856.1 84630 84785 D PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); Hexameric tyrosine-coordinated heme protein (HTHP) 84630..84785 Methylophaga frappieri 12842665 YP_006291955.1 CDS Q7C_87 NC_017856.1 84819 86021 R PFAM: NnrS protein; NnrS protein involved in response to NO complement(84819..86021) Methylophaga frappieri 12842666 YP_006291956.1 CDS Q7C_88 NC_017856.1 86058 87368 R PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing; Copper-containing nitrite reductase complement(86058..87368) Methylophaga frappieri 12842667 YP_006291957.1 CDS Q7C_89 NC_017856.1 87871 88113 D hypothetical protein 87871..88113 Methylophaga frappieri 12842668 YP_006291958.1 CDS Q7C_90 NC_017856.1 88161 89738 R PFAM: GAF domain; Sigma-54 interaction domain; Anaerobic nitric oxide reductase transcription regulator NorR complement(88161..89738) Methylophaga frappieri 12842669 YP_006291959.1 CDS Q7C_91 NC_017856.1 89932 91122 D PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase); flavohemoprotein 89932..91122 Methylophaga frappieri 12842670 YP_006291960.1 CDS Q7C_92 NC_017856.1 91363 91548 D hypothetical protein 91363..91548 Methylophaga frappieri 12842671 YP_006291961.1 CDS Q7C_93 NC_017856.1 91552 92241 R hypothetical protein complement(91552..92241) Methylophaga frappieri 12842672 YP_006291962.1 CDS Q7C_94 NC_017856.1 92234 93013 R PFAM: Iron permease FTR1 family; FTR1 family iron permease complement(92234..93013) Methylophaga frappieri 12842673 YP_006291963.1 CDS Q7C_95 NC_017856.1 93016 93354 R hypothetical protein complement(93016..93354) Methylophaga frappieri 12842674 YP_006291964.1 CDS Q7C_96 NC_017856.1 93351 94676 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor histidine kinase complement(93351..94676) Methylophaga frappieri 12842675 YP_006291965.1 CDS Q7C_97 NC_017856.1 94673 94849 R PFAM: Transcriptional regulatory protein, C terminal; Two-component system response regulator QseB complement(94673..94849) Methylophaga frappieri 12842676 YP_006291966.1 CDS Q7C_98 NC_017856.1 94991 97975 D PFAM: Transposase; transposase, TnpA family 94991..97975 Methylophaga frappieri 12842677 YP_006291967.1 CDS Q7C_99 NC_017856.1 98028 98270 R PFAM: Nickel uptake substrate-specific transmembrane region; metal-binding protein complement(98028..98270) Methylophaga frappieri 12842678 YP_006291968.1 CDS Q7C_100 NC_017856.1 98271 99317 R PFAM: Predicted periplasmic protein (DUF2271); PepSY-associated TM helix; hypothetical protein complement(98271..99317) Methylophaga frappieri 12842679 YP_006291969.1 CDS Q7C_101 NC_017856.1 99551 100450 R PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(99551..100450) Methylophaga frappieri 12842680 YP_006291970.1 CDS Q7C_102 NC_017856.1 100518 101000 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD complement(100518..101000) Methylophaga frappieri 12842681 YP_006291971.1 CDS Q7C_103 NC_017856.1 101010 102263 R PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type; isocitrate dehydrogenase complement(101010..102263) Methylophaga frappieri 12842682 YP_006291972.1 CDS Q7C_104 NC_017856.1 102325 103023 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; Ribosomal large subunit pseudouridine synthase E 102325..103023 Methylophaga frappieri 12842683 YP_006291973.1 CDS Q7C_105 NC_017856.1 103163 103321 D hypothetical protein 103163..103321 Methylophaga frappieri 12842684 YP_006291974.1 CDS Q7C_106 NC_017856.1 103324 104427 D PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 103324..104427 Methylophaga frappieri 12842685 YP_006291975.1 CDS Q7C_107 NC_017856.1 104424 105056 D PFAM: Protein of unknown function (DUF489); hypothetical protein 104424..105056 Methylophaga frappieri 12842686 YP_006291976.1 CDS Q7C_108 NC_017856.1 105031 105756 R PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein; YbbM seven transmembrane helix protein complement(105031..105756) Methylophaga frappieri 12842687 YP_006291977.1 CDS Q7C_109 NC_017856.1 105835 108372 R PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; Aconitate hydratase 2 complement(105835..108372) Methylophaga frappieri 12842688 YP_006291978.1 CDS Q7C_110 NC_017856.1 108499 109866 D PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Adenylosuccinate lyase 108499..109866 Methylophaga frappieri 12842689 YP_006291979.1 CDS Q7C_111 NC_017856.1 109866 110363 D hypothetical protein 109866..110363 Methylophaga frappieri 12842690 YP_006291980.1 CDS Q7C_112 NC_017856.1 110376 111122 D hypothetical protein 110376..111122 Methylophaga frappieri 12842691 YP_006291981.1 CDS Q7C_113 NC_017856.1 111139 111741 D PFAM: Nitroreductase family; Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase 111139..111741 Methylophaga frappieri 12842692 YP_006291982.1 CDS Q7C_114 NC_017856.1 111751 112752 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(111751..112752) Methylophaga frappieri 12842693 YP_006291983.1 CDS Q7C_115 NC_017856.1 112818 114026 R PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase complement(112818..114026) Methylophaga frappieri 12842694 YP_006291984.1 CDS Q7C_116 NC_017856.1 114075 114851 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); Methyl-directed repair DNA adenine methylase complement(114075..114851) Methylophaga frappieri 12842695 YP_006291985.1 CDS Q7C_117 NC_017856.1 114931 116694 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex complement(114931..116694) Methylophaga frappieri 12842696 YP_006291986.1 CDS Q7C_118 NC_017856.1 116691 118010 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex complement(116691..118010) Methylophaga frappieri 12842697 YP_006291987.1 CDS Q7C_119 NC_017856.1 118013 120673 R PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; Pyruvate dehydrogenase E1 component complement(118013..120673) Methylophaga frappieri 12842698 YP_006291988.1 CDS Q7C_120 NC_017856.1 120819 121415 R PFAM: Ferric reductase like transmembrane component; hypothetical protein complement(120819..121415) Methylophaga frappieri 12842699 YP_006291989.1 CDS Q7C_121 NC_017856.1 121426 122382 R PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase subunit YedY complement(121426..122382) Methylophaga frappieri 12842700 YP_006291990.1 CDS Q7C_122 NC_017856.1 122372 123004 R PFAM: DoxX; hypothetical protein complement(122372..123004) Methylophaga frappieri 12842701 YP_006291991.1 CDS Q7C_123 NC_017856.1 123073 123372 R low-complexity protein complement(123073..123372) Methylophaga frappieri 12842702 YP_006291992.1 CDS Q7C_124 NC_017856.1 123578 124189 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 123578..124189 Methylophaga frappieri 12842703 YP_006291993.1 CDS Q7C_125 NC_017856.1 124190 124432 D hypothetical protein 124190..124432 Methylophaga frappieri 12842704 YP_006291994.1 CDS Q7C_126 NC_017856.1 124433 124678 R PFAM: Protein of unknown function (DUF1244); hypothetical protein complement(124433..124678) Methylophaga frappieri 12842705 YP_006291995.1 CDS Q7C_127 NC_017856.1 124671 126686 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Oligopeptide/dipeptide ABC transporter, ATP-binding protein complement(124671..126686) Methylophaga frappieri 12842706 YP_006291996.1 CDS Q7C_128 NC_017856.1 126683 128092 R PFAM: Binding-protein-dependent transport system inner membrane component; Oligopeptide transport system permease protein complement(126683..128092) Methylophaga frappieri 12842707 YP_006291997.1 CDS Q7C_129 NC_017856.1 128104 129063 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(128104..129063) Methylophaga frappieri 12842708 YP_006291998.1 CDS Q7C_130 NC_017856.1 129060 130148 R PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; Chorismate mutase I / Prephenate dehydratase complement(129060..130148) Methylophaga frappieri 12842709 YP_006291999.1 CDS Q7C_131 NC_017856.1 130154 131200 R PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; Phosphoserine aminotransferase complement(130154..131200) Methylophaga frappieri 12842710 YP_006292000.1 CDS Q7C_132 NC_017856.1 131238 133817 R PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(131238..133817) Methylophaga frappieri 12842711 YP_006292001.1 CDS Q7C_133 NC_017856.1 133925 134533 R PFAM: Protein of unknown function (DUF330); hypothetical protein complement(133925..134533) Methylophaga frappieri 12842712 YP_006292002.1 CDS Q7C_134 NC_017856.1 134681 135199 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 134681..135199 Methylophaga frappieri 12842713 YP_006292003.1 CDS Q7C_135 NC_017856.1 135196 136686 R PFAM: Phosphomethylpyrimidine kinase; Thiamine monophosphate synthase/TENI; TIGRFAM: phosphomethylpyrimidine kinase; thiamine-phosphate pyrophosphorylase; Thiamin-phosphate pyrophosphorylase complement(135196..136686) Methylophaga frappieri 12842714 YP_006292004.1 CDS Q7C_136 NC_017856.1 136679 137476 R PFAM: Thiazole biosynthesis protein ThiG; Thiazole biosynthesis protein ThiG complement(136679..137476) Methylophaga frappieri 12842715 YP_006292005.1 CDS Q7C_137 NC_017856.1 137478 137678 R PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(137478..137678) Methylophaga frappieri 12842716 YP_006292006.1 CDS Q7C_138 NC_017856.1 137662 138735 R PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; glycine oxidase complement(137662..138735) Methylophaga frappieri 12842717 YP_006292007.1 CDS Q7C_139 NC_017856.1 138761 140569 R PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; Thiamin biosynthesis protein ThiC complement(138761..140569) Methylophaga frappieri 12842718 YP_006292008.1 CDS Q7C_140 NC_017856.1 140961 141515 D PFAM: Smr domain; hypothetical protein 140961..141515 Methylophaga frappieri 12842719 YP_006292009.1 CDS Q7C_141 NC_017856.1 141544 142125 R Lipase complement(141544..142125) Methylophaga frappieri 12842720 YP_006292010.1 CDS Q7C_142 NC_017856.1 142184 142945 R PFAM: Integral membrane protein TerC family; integral membrane protein TerC complement(142184..142945) Methylophaga frappieri 12842721 YP_006292011.1 CDS Q7C_143 NC_017856.1 143030 145192 R PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase (GGDEF) with GAF and HAMP domains complement(143030..145192) Methylophaga frappieri 12842722 YP_006292012.1 CDS Q7C_144 NC_017856.1 145199 149083 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase complement(145199..149083) Methylophaga frappieri 12842723 YP_006292013.1 CDS Q7C_145 NC_017856.1 149209 149613 D PFAM: RDD family; hypothetical protein 149209..149613 Methylophaga frappieri 12842724 YP_006292014.1 CDS Q7C_146 NC_017856.1 149621 149848 R PFAM: Protein of unknown function (DUF2835); hypothetical protein complement(149621..149848) Methylophaga frappieri 12842725 YP_006292015.1 CDS Q7C_147 NC_017856.1 149826 150263 R PFAM: HIT domain; HIT family hydrolase, diadenosine tetraphosphate hydrolase complement(149826..150263) Methylophaga frappieri 12842726 YP_006292016.1 CDS Q7C_148 NC_017856.1 150266 152914 R PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type; Membrane alanine aminopeptidase N complement(150266..152914) Methylophaga frappieri 12842727 YP_006292017.1 CDS Q7C_149 NC_017856.1 152914 153237 R Bsu YqfO NIF3/CutA domain-containing protein complement(152914..153237) Methylophaga frappieri 12842810 YP_006292018.1 CDS Q7C_150 NC_017856.1 153240 154280 R PFAM: WD domain, G-beta repeat; WD-repeat protein complement(153240..154280) Methylophaga frappieri 12842811 YP_006292019.1 CDS Q7C_151 NC_017856.1 154290 154853 R PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; Deoxycytidine triphosphate deaminase complement(154290..154853) Methylophaga frappieri 12842812 YP_006292020.1 CDS Q7C_152 NC_017856.1 154899 155975 R PFAM: ParA/MinD ATPase like; Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP complement(154899..155975) Methylophaga frappieri 12842813 YP_006292021.1 CDS Q7C_153 NC_017856.1 156097 156978 R PFAM: Carbon-nitrogen hydrolase; Hydrolase, carbon-nitrogen family complement(156097..156978) Methylophaga frappieri 12842814 YP_006292022.1 CDS Q7C_154 NC_017856.1 157028 157615 R Histone acetyltransferase HPA2 complement(157028..157615) Methylophaga frappieri 12842815 YP_006292023.1 CDS Q7C_155 NC_017856.1 157689 158096 R TIGRFAM: hypothetical protein, steroid delta-isomerase-related; Isopropylmalate/homocitrate/citramalate synthase complement(157689..158096) Methylophaga frappieri 12842816 YP_006292024.1 CDS Q7C_156 NC_017856.1 158177 159061 R PFAM: Arginase family; TIGRFAM: agmatinase; Agmatinase complement(158177..159061) Methylophaga frappieri 12842817 YP_006292025.1 CDS Q7C_157 NC_017856.1 159058 160224 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; Carboxynorspermidine decarboxylase complement(159058..160224) Methylophaga frappieri 12842818 YP_006292026.1 CDS Q7C_158 NC_017856.1 160263 161462 R PFAM: Saccharopine dehydrogenase; catalase complement(160263..161462) Methylophaga frappieri 12842819 YP_006292027.1 CDS Q7C_159 NC_017856.1 161523 163466 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; biosynthetic arginine decarboxylase complement(161523..163466) Methylophaga frappieri 12842820 YP_006292028.1 CDS Q7C_160 NC_017856.1 163577 164632 R PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; hypothetical protein complement(163577..164632) Methylophaga frappieri 12842821 YP_006292029.1 CDS Q7C_161 NC_017856.1 164632 165537 R PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Ribosomal protein S6 glutaminyl transferase complement(164632..165537) Methylophaga frappieri 12842822 YP_006292030.1 CDS Q7C_162 NC_017856.1 165534 166031 R PFAM: Protein of unknown function (DUF785); hypothetical protein complement(165534..166031) Methylophaga frappieri 12842823 YP_006292031.1 CDS Q7C_163 NC_017856.1 166249 166671 R PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; fimbrial protein complement(166249..166671) Methylophaga frappieri 12842824 YP_006292032.1 CDS Q7C_164 NC_017856.1 166813 168522 R PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; Lipid A core-O-antigen ligase complement(166813..168522) Methylophaga frappieri 12842825 YP_006292033.1 CDS Q7C_165 NC_017856.1 168577 170166 R PFAM: Tetratricopeptide repeat; TIGRFAM: hypothetical protein; hypothetical protein complement(168577..170166) Methylophaga frappieri 12842826 YP_006292034.1 CDS Q7C_166 NC_017856.1 170273 171304 D PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); membrane-bound metal-dependent hydrolase 170273..171304 Methylophaga frappieri 12842827 YP_006292035.1 CDS Q7C_167 NC_017856.1 171281 172012 R PFAM: Uncharacterized protein conserved in bacteria (DUF2063); hypothetical protein complement(171281..172012) Methylophaga frappieri 12842828 YP_006292036.1 CDS Q7C_168 NC_017856.1 172005 172877 R PFAM: Protein of unknown function (DUF692); hypothetical protein complement(172005..172877) Methylophaga frappieri 12842829 YP_006292037.1 CDS Q7C_169 NC_017856.1 172915 173667 R hypothetical protein complement(172915..173667) Methylophaga frappieri 12842830 YP_006292038.1 CDS Q7C_170 NC_017856.1 173669 174016 R PFAM: Rhodanese-like domain; beta-lactamase complement(173669..174016) Methylophaga frappieri 12842831 YP_006292039.1 CDS Q7C_171 NC_017856.1 174158 175138 D PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.1; Oligopeptide transport system permease OppB 174158..175138 Methylophaga frappieri 12842832 YP_006292040.1 CDS Q7C_172 NC_017856.1 175131 175940 D PFAM: Protein of unknown function (DUF455); hypothetical protein 175131..175940 Methylophaga frappieri 12842833 YP_006292041.1 CDS Q7C_173 NC_017856.1 175937 176263 R PFAM: Uncharacterised protein family (UPF0125); hypothetical protein complement(175937..176263) Methylophaga frappieri 12842834 YP_006292042.1 CDS Q7C_174 NC_017856.1 176256 176690 R PFAM: Polyketide cyclase / dehydrase and lipid transport; hypothetical protein complement(176256..176690) Methylophaga frappieri 12842835 YP_006292043.1 CDS Q7C_175 NC_017856.1 176717 178084 R PFAM: Sodium:neurotransmitter symporter family; Sodium-dependent transporter family protein complement(176717..178084) Methylophaga frappieri 12842836 YP_006292044.1 CDS Q7C_176 NC_017856.1 178177 178656 D PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; tmRNA-binding protein SmpB 178177..178656 Methylophaga frappieri 12842837 YP_006292045.1 CDS Q7C_177 NC_017856.1 179167 179682 R hypothetical protein complement(179167..179682) Methylophaga frappieri 12842838 YP_006292046.1 CDS Q7C_178 NC_017856.1 179798 180055 R hypothetical protein complement(179798..180055) Methylophaga frappieri 12842839 YP_006292047.1 CDS Q7C_179 NC_017856.1 180221 180799 D PFAM: SNARE associated Golgi protein; hypothetical protein 180221..180799 Methylophaga frappieri 12842840 YP_006292048.1 CDS Q7C_180 NC_017856.1 180804 181328 R PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; Peptide methionine sulfoxide reductase MsrA complement(180804..181328) Methylophaga frappieri 12842841 YP_006292049.1 CDS Q7C_181 NC_017856.1 181397 181543 R hypothetical protein complement(181397..181543) Methylophaga frappieri 12842842 YP_006292050.1 CDS Q7C_182 NC_017856.1 181797 182777 R transcriptional regulator, AraC/XylS family complement(181797..182777) Methylophaga frappieri 12842843 YP_006292051.1 CDS Q7C_183 NC_017856.1 182774 182911 R hypothetical protein complement(182774..182911) Methylophaga frappieri 12842844 YP_006292052.1 CDS Q7C_184 NC_017856.1 183050 185092 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 183050..185092 Methylophaga frappieri 12842845 YP_006292053.1 CDS Q7C_185 NC_017856.1 185160 185435 D hypothetical protein 185160..185435 Methylophaga frappieri 12842846 YP_006292054.1 CDS Q7C_186 NC_017856.1 185432 185713 D hypothetical protein 185432..185713 Methylophaga frappieri 12842847 YP_006292055.1 CDS Q7C_187 NC_017856.1 185731 187398 D PFAM: PepSY-associated TM helix; iron-regulated membrane protein 185731..187398 Methylophaga frappieri 12842848 YP_006292056.1 CDS Q7C_188 NC_017856.1 187474 189942 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TonB-dependent receptor complement(187474..189942) Methylophaga frappieri 12842849 YP_006292057.1 CDS Q7C_189 NC_017856.1 190075 191073 R PFAM: FecR protein; FecR protein complement(190075..191073) Methylophaga frappieri 12842850 YP_006292058.1 CDS Q7C_190 NC_017856.1 191063 191407 R PFAM: Sigma-70, region 4; sigma-70 factor, ECF subfamily complement(191063..191407) Methylophaga frappieri 12842851 YP_006292059.1 CDS Q7C_191 NC_017856.1 191985 193604 D PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase 191985..193604 Methylophaga frappieri 12842852 YP_006292060.1 CDS Q7C_192 NC_017856.1 193808 194617 D hypothetical protein 193808..194617 Methylophaga frappieri 12842853 YP_006292061.1 CDS Q7C_193 NC_017856.1 194807 196108 D PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 194807..196108 Methylophaga frappieri 12842854 YP_006292062.1 CDS Q7C_194 NC_017856.1 196199 196654 D PFAM: MarR family; Organic hydroperoxide resistance transcriptional regulator 196199..196654 Methylophaga frappieri 12842855 YP_006292063.1 CDS Q7C_195 NC_017856.1 196656 197453 R hypothetical protein complement(196656..197453) Methylophaga frappieri 12842856 YP_006292064.1 CDS Q7C_196 NC_017856.1 197476 197790 R hypothetical protein complement(197476..197790) Methylophaga frappieri 12842857 YP_006292065.1 CDS Q7C_197 NC_017856.1 197944 198759 D PFAM: Ion transport protein; Kef-type K+ transport system NAD-binding protein 197944..198759 Methylophaga frappieri 12842858 YP_006292066.1 CDS Q7C_198 NC_017856.1 198824 199345 D PFAM: Lipocalin-like domain; Outer membrane lipoprotein 198824..199345 Methylophaga frappieri 12842859 YP_006292067.1 CDS Q7C_199 NC_017856.1 199474 199923 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 199474..199923 Methylophaga frappieri 12842860 YP_006292068.1 CDS Q7C_200 NC_017856.1 200191 200313 R hypothetical protein complement(200191..200313) Methylophaga frappieri 12842861 YP_006292069.1 CDS Q7C_201 NC_017856.1 200366 200674 D hypothetical protein 200366..200674 Methylophaga frappieri 12842862 YP_006292070.1 CDS Q7C_202 NC_017856.1 200676 201641 R PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; tRNA (5-methoxyuridine) 34 synthase complement(200676..201641) Methylophaga frappieri 12842917 YP_006292071.1 CDS Q7C_203 NC_017856.1 201642 202373 R TIGRFAM: methyltransferase, putative; tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase complement(201642..202373) Methylophaga frappieri 12842918 YP_006292072.1 CDS Q7C_204 NC_017856.1 202370 203056 R PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; Inactive metal-dependent proteases-like protein complement(202370..203056) Methylophaga frappieri 12842919 YP_006292073.1 CDS Q7C_205 NC_017856.1 203133 203255 D hypothetical protein 203133..203255 Methylophaga frappieri 12842920 YP_006292074.1 CDS Q7C_206 NC_017856.1 203268 205454 R PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; Fe-S oxidoreductase complement(203268..205454) Methylophaga frappieri 12842921 YP_006292075.1 CDS Q7C_207 NC_017856.1 205525 206112 R PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG protein complement(205525..206112) Methylophaga frappieri 12842922 YP_006292076.1 CDS Q7C_208 NC_017856.1 206191 206994 R PFAM: Spermine/spermidine synthase; spermidine synthase complement(206191..206994) Methylophaga frappieri 12842923 YP_006292077.1 CDS Q7C_209 NC_017856.1 206998 207870 R PFAM: Protein of unknown function (DUF3530); hypothetical protein complement(206998..207870) Methylophaga frappieri 12842924 YP_006292078.1 CDS Q7C_210 NC_017856.1 208030 208722 D PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 208030..208722 Methylophaga frappieri 12842925 YP_006292079.1 CDS Q7C_211 NC_017856.1 208782 210278 D PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; Anthranilate synthase, aminase component 208782..210278 Methylophaga frappieri 12842926 YP_006292080.1 CDS Q7C_212 NC_017856.1 210288 210869 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase 210288..210869 Methylophaga frappieri 12842927 YP_006292081.1 CDS Q7C_213 NC_017856.1 210869 211909 D PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 210869..211909 Methylophaga frappieri 12842928 YP_006292082.1 CDS Q7C_214 NC_017856.1 211902 212702 D PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 211902..212702 Methylophaga frappieri 12842929 YP_006292083.1 CDS Q7C_215 NC_017856.1 212699 213421 R PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Cyclic AMP receptor protein complement(212699..213421) Methylophaga frappieri 12842930 YP_006292084.1 CDS Q7C_216 NC_017856.1 213502 213921 D PFAM: OsmC-like protein; OsmC/Ohr family protein 213502..213921 Methylophaga frappieri 12842931 YP_006292085.1 CDS Q7C_217 NC_017856.1 213978 214214 D PFAM: YcgL domain; hypothetical protein 213978..214214 Methylophaga frappieri 12842932 YP_006292086.1 CDS Q7C_218 NC_017856.1 214209 216746 R PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS complement(214209..216746) Methylophaga frappieri 12842933 YP_006292087.1 CDS Q7C_219 NC_017856.1 216764 217258 D PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Protein Implicated in DNA repair function with RecA and MutS; C-terminal domain of CinA type S 216764..217258 Methylophaga frappieri 12842934 YP_006292088.1 CDS Q7C_220 NC_017856.1 217317 218360 D PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A 217317..218360 Methylophaga frappieri 12842935 YP_006292089.1 CDS Q7C_221 NC_017856.1 218435 218797 D PFAM: RecX family; Regulatory protein RecX 218435..218797 Methylophaga frappieri 12842936 YP_006292090.1 CDS Q7C_222 NC_017856.1 218794 221397 D PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 218794..221397 Methylophaga frappieri 12842937 YP_006292091.1 CDS Q7C_223 NC_017856.1 221400 222620 D PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Aspartokinase 221400..222620 Methylophaga frappieri 12842938 YP_006292092.1 CDS Q7C_224 NC_017856.1 222823 223008 D PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator 222823..223008 Methylophaga frappieri 12842939 YP_006292093.1 CDS Q7C_227 NC_017856.1 223392 223991 R PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS-response repressor and protease LexA complement(223392..223991) Methylophaga frappieri 12842942 YP_006292094.1 CDS Q7C_228 NC_017856.1 224248 224790 R PFAM: Glutathione peroxidase; glutathione peroxidase complement(224248..224790) Methylophaga frappieri 12842943 YP_006292095.1 CDS Q7C_229 NC_017856.1 225029 225241 D hypothetical protein 225029..225241 Methylophaga frappieri 12842944 YP_006292096.1 CDS Q7C_230 NC_017856.1 225238 226548 R PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: hypothetical protein; Metallo-beta-lactamase family protein, RNA-specific complement(225238..226548) Methylophaga frappieri 12842945 YP_006292097.1 CDS Q7C_231 NC_017856.1 226830 227111 D PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; oxaloacetate decarboxylase subunit gamma 226830..227111 Methylophaga frappieri 12842946 YP_006292098.1 CDS Q7C_232 NC_017856.1 227148 228929 D PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; oxaloacetate decarboxylase subunit alpha 227148..228929 Methylophaga frappieri 12842947 YP_006292099.1 CDS Q7C_233 NC_017856.1 228939 230075 D PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; oxaloacetate decarboxylase subunit beta 228939..230075 Methylophaga frappieri 12842948 YP_006292100.1 CDS Q7C_234 NC_017856.1 230082 230390 R hypothetical protein complement(230082..230390) Methylophaga frappieri 12842949 YP_006292101.1 CDS Q7C_235 NC_017856.1 230479 230703 D PFAM: S4 domain; hypothetical protein 230479..230703 Methylophaga frappieri 12842950 YP_006292102.1 CDS Q7C_236 NC_017856.1 230715 231305 R PFAM: 2OG-Fe(II) oxygenase superfamily; TIGRFAM: DNA alkylation damage repair protein AlkB; Alkylated DNA repair protein AlkB complement(230715..231305) Methylophaga frappieri 12842951 YP_006292103.1 CDS Q7C_237 NC_017856.1 231364 231876 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase complement(231364..231876) Methylophaga frappieri 12842952 YP_006292104.1 CDS Q7C_238 NC_017856.1 231993 232406 D hypothetical protein 231993..232406 Methylophaga frappieri 12842953 YP_006292105.1 CDS Q7C_239 NC_017856.1 233012 233863 D PFAM: Pirin C-terminal cupin domain; Pirin; Pirin 233012..233863 Methylophaga frappieri 12842954 YP_006292106.1 CDS Q7C_240 NC_017856.1 234161 234736 R PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase complement(234161..234736) Methylophaga frappieri 12842955 YP_006292107.1 CDS Q7C_241 NC_017856.1 234839 235747 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 234839..235747 Methylophaga frappieri 12842956 YP_006292108.1 CDS Q7C_242 NC_017856.1 235807 236463 D PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein 235807..236463 Methylophaga frappieri 12842957 YP_006292109.1 CDS Q7C_243 NC_017856.1 236570 237634 R PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; Inner membrane protein YrbG complement(236570..237634) Methylophaga frappieri 12842958 YP_006292110.1 CDS Q7C_244 NC_017856.1 237675 239630 R PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase complement(237675..239630) Methylophaga frappieri 12842959 YP_006292111.1 CDS Q7C_245 NC_017856.1 239633 240466 R PFAM: pfkB family carbohydrate kinase; fructokinase complement(239633..240466) Methylophaga frappieri 12842960 YP_006292112.1 CDS Q7C_246 NC_017856.1 240516 241373 R PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; HAD-superfamily hydrolase, subfamily IIB; alpha,alpha-trehalose-phosphate synthase complement(240516..241373) Methylophaga frappieri 12842961 YP_006292113.1 CDS Q7C_247 NC_017856.1 241380 243515 R PFAM: Sucrose synthase; Glycosyl transferases group 1; Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; sucrose-phosphate synthase, putative, glycosyltransferase domain; sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase complement(241380..243515) Methylophaga frappieri 12842962 YP_006292114.1 CDS Q7C_248 NC_017856.1 243683 244513 D methyltransferase 243683..244513 Methylophaga frappieri 12842963 YP_006292115.1 CDS Q7C_249 NC_017856.1 244510 245235 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; Succinate dehydrogenase iron-sulfur protein complement(244510..245235) Methylophaga frappieri 12842964 YP_006292116.1 CDS Q7C_250 NC_017856.1 245232 247172 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; Succinate dehydrogenase flavoprotein subunit complement(245232..247172) Methylophaga frappieri 12842965 YP_006292117.1 CDS Q7C_251 NC_017856.1 247169 247759 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; Succinate dehydrogenase cytochrome b subunit complement(247169..247759) Methylophaga frappieri 12842966 YP_006292118.1 CDS Q7C_252 NC_017856.1 247759 248262 R hypothetical protein complement(247759..248262) Methylophaga frappieri 12842967 YP_006292119.1 CDS Q7C_253 NC_017856.1 248426 250453 D PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 248426..250453 Methylophaga frappieri 12842968 YP_006292120.1 CDS Q7C_254 NC_017856.1 250497 251051 R PFAM: Peptidase propeptide and YPEB domain; propeptide, pepSY amd peptidase M4 complement(250497..251051) Methylophaga frappieri 12842969 YP_006292121.1 CDS Q7C_255 NC_017856.1 251200 251625 R PFAM: Hsp20/alpha crystallin family; Low molecular weight heat shock protein complement(251200..251625) Methylophaga frappieri 12842970 YP_006292122.1 CDS Q7C_256 NC_017856.1 251755 252411 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA binding response regulator, LuxR family complement(251755..252411) Methylophaga frappieri 12842971 YP_006292123.1 CDS Q7C_257 NC_017856.1 252401 253744 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; sensory box histidine kinase complement(252401..253744) Methylophaga frappieri 12842972 YP_006292124.1 CDS Q7C_258 NC_017856.1 253767 254810 R hypothetical protein complement(253767..254810) Methylophaga frappieri 12842973 YP_006292125.1 CDS Q7C_259 NC_017856.1 254887 257220 R PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein; General secretion pathway protein D complement(254887..257220) Methylophaga frappieri 12842974 YP_006292126.1 CDS Q7C_260 NC_017856.1 257217 257594 R hypothetical protein complement(257217..257594) Methylophaga frappieri 12842975 YP_006292127.1 CDS Q7C_261 NC_017856.1 257661 258884 R PFAM: Bacterial type II secretion system protein F domain; General secretion pathway protein F complement(257661..258884) Methylophaga frappieri 12842976 YP_006292128.1 CDS Q7C_262 NC_017856.1 258886 260535 R PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; type IV fimbrial assembly, ATPase PilB complement(258886..260535) Methylophaga frappieri 12842977 YP_006292129.1 CDS Q7C_263 NC_017856.1 260553 261215 R hypothetical protein complement(260553..261215) Methylophaga frappieri 12842978 YP_006292130.1 CDS Q7C_264 NC_017856.1 261212 262885 R hypothetical protein complement(261212..262885) Methylophaga frappieri 12842979 YP_006292131.1 CDS Q7C_265 NC_017856.1 262978 263133 R hypothetical protein complement(262978..263133) Methylophaga frappieri 12842980 YP_006292132.1 CDS Q7C_266 NC_017856.1 263169 264758 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(263169..264758) Methylophaga frappieri 12842981 YP_006292133.1 CDS Q7C_267 NC_017856.1 264766 265596 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(264766..265596) Methylophaga frappieri 12842982 YP_006292134.1 CDS Q7C_268 NC_017856.1 265777 266790 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(265777..266790) Methylophaga frappieri 12842983 YP_006292135.1 CDS Q7C_269 NC_017856.1 266787 266972 R hypothetical protein complement(266787..266972) Methylophaga frappieri 12842984 YP_006292136.1 CDS Q7C_270 NC_017856.1 266953 267147 R hypothetical protein complement(266953..267147) Methylophaga frappieri 12842985 YP_006292137.1 CDS Q7C_271 NC_017856.1 267489 269267 R PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; Lipid A core--O-antigen ligase complement(267489..269267) Methylophaga frappieri 12842986 YP_006292138.1 CDS Q7C_272 NC_017856.1 269660 269995 R PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; PadD-like protein complement(269660..269995) Methylophaga frappieri 12842987 YP_006292139.1 CDS Q7C_273 NC_017856.1 270007 270453 R PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 complement(270007..270453) Methylophaga frappieri 12842988 YP_006292140.1 CDS Q7C_274 NC_017856.1 270453 271676 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; Cysteine desulfurase , SufS subfamily complement(270453..271676) Methylophaga frappieri 12842989 YP_006292141.1 CDS Q7C_275 NC_017856.1 271682 272974 R PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; Iron-sulfur cluster assembly protein SufD complement(271682..272974) Methylophaga frappieri 12842990 YP_006292142.1 CDS Q7C_276 NC_017856.1 272971 273738 R PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-sulfur cluster assembly ATPase protein SufC complement(272971..273738) Methylophaga frappieri 12842991 YP_006292143.1 CDS Q7C_277 NC_017856.1 273779 275233 R PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-sulfur cluster assembly protein SufB complement(273779..275233) Methylophaga frappieri 12842992 YP_006292144.1 CDS Q7C_278 NC_017856.1 275226 275714 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial; Iron-sulfur cluster regulator IscR complement(275226..275714) Methylophaga frappieri 12842993 YP_006292145.1 CDS Q7C_279 NC_017856.1 275967 276587 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase fklB 275967..276587 Methylophaga frappieri 12842994 YP_006292146.1 CDS Q7C_280 NC_017856.1 276640 277188 R PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase AmpD complement(276640..277188) Methylophaga frappieri 12842995 YP_006292147.1 CDS Q7C_281 NC_017856.1 277265 278107 D PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase 277265..278107 Methylophaga frappieri 12842996 YP_006292148.1 CDS Q7C_282 NC_017856.1 278142 280448 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor complement(278142..280448) Methylophaga frappieri 12842997 YP_006292149.1 CDS Q7C_283 NC_017856.1 280603 282000 R PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; hypothetical protein complement(280603..282000) Methylophaga frappieri 12842998 YP_006292150.1 CDS Q7C_284 NC_017856.1 282011 282790 R PFAM: Protein of unknown function (DUF1223); hypothetical protein complement(282011..282790) Methylophaga frappieri 12842999 YP_006292151.1 CDS Q7C_285 NC_017856.1 282829 283881 R PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine 13 synthase complement(282829..283881) Methylophaga frappieri 12844614 YP_006292152.1 CDS Q7C_286 NC_017856.1 283884 284366 R PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase complement(283884..284366) Methylophaga frappieri 12844615 YP_006292153.1 CDS Q7C_287 NC_017856.1 284363 285070 R PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(284363..285070) Methylophaga frappieri 12844616 YP_006292154.1 CDS Q7C_288 NC_017856.1 285063 285347 R PFAM: Septum formation initiator; Cell division protein FtsB complement(285063..285347) Methylophaga frappieri 12844617 YP_006292155.1 CDS Q7C_289 NC_017856.1 285360 286637 R PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase complement(285360..286637) Methylophaga frappieri 12844618 YP_006292156.1 CDS Q7C_290 NC_017856.1 286677 287513 R PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase complement(286677..287513) Methylophaga frappieri 12844619 YP_006292157.1 CDS Q7C_291 NC_017856.1 287516 289150 R PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase complement(287516..289150) Methylophaga frappieri 12844620 YP_006292158.1 CDS Q7C_292 NC_017856.1 289233 290573 R PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase complement(289233..290573) Methylophaga frappieri 12844621 YP_006292159.1 CDS Q7C_293 NC_017856.1 290585 291541 R PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxyl transferase subunit alpha complement(290585..291541) Methylophaga frappieri 12844622 YP_006292160.1 CDS Q7C_294 NC_017856.1 291602 292741 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT complement(291602..292741) Methylophaga frappieri 12844623 YP_006292161.1 CDS Q7C_295 NC_017856.1 292787 296263 R PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha complement(292787..296263) Methylophaga frappieri 12844624 YP_006292162.1 CDS Q7C_296 NC_017856.1 296345 297394 R PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta N-acetyl-glucosaminidase complement(296345..297394) Methylophaga frappieri 12844625 YP_006292163.1 CDS Q7C_297 NC_017856.1 297401 297892 R PFAM: L,D-transpeptidase catalytic domain; hypothetical protein complement(297401..297892) Methylophaga frappieri 12844626 YP_006292164.1 CDS Q7C_298 NC_017856.1 298035 298928 R MxaL protein complement(298035..298928) Methylophaga frappieri 12844627 YP_006292165.1 CDS Q7C_299 NC_017856.1 298970 299479 R hypothetical protein complement(298970..299479) Methylophaga frappieri 12844628 YP_006292166.1 CDS Q7C_300 NC_017856.1 299502 300518 R PFAM: von Willebrand factor type A domain; MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase complement(299502..300518) Methylophaga frappieri 12844629 YP_006292167.1 CDS Q7C_301 NC_017856.1 300515 301381 R hypothetical protein complement(300515..301381) Methylophaga frappieri 12844630 YP_006292168.1 CDS Q7C_302 NC_017856.1 301394 302290 R MxaS-like protein complement(301394..302290) Methylophaga frappieri 12844631 YP_006292169.1 CDS Q7C_303 NC_017856.1 302294 303313 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(302294..303313) Methylophaga frappieri 12844632 YP_006292170.1 CDS Q7C_304 NC_017856.1 303353 303763 R hypothetical protein complement(303353..303763) Methylophaga frappieri 12844633 YP_006292171.1 CDS Q7C_305 NC_017856.1 303937 305289 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific 303937..305289 Methylophaga frappieri 12844634 YP_006292172.1 CDS Q7C_306 NC_017856.1 305286 305957 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator 305286..305957 Methylophaga frappieri 12844635 YP_006292173.1 CDS Q7C_307 NC_017856.1 305962 307533 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; Alkyl hydroperoxide reductase protein F complement(305962..307533) Methylophaga frappieri 12844636 YP_006292174.1 CDS Q7C_308 NC_017856.1 307612 308178 R PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; Alkyl hydroperoxide reductase protein C complement(307612..308178) Methylophaga frappieri 12844637 YP_006292175.1 CDS Q7C_309 NC_017856.1 308446 309753 R PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(308446..309753) Methylophaga frappieri 12844638 YP_006292176.1 CDS Q7C_310 NC_017856.1 309815 310144 R PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Iron binding protein IscA for iron-sulfur cluster assembly complement(309815..310144) Methylophaga frappieri 12844639 YP_006292177.1 CDS Q7C_311 NC_017856.1 310150 311292 R PFAM: Aminotransferase class-V; cysteine desulfurase complement(310150..311292) Methylophaga frappieri 12844640 YP_006292178.1 CDS Q7C_312 NC_017856.1 311295 311741 R PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein; Iron-sulfur cluster regulator IscR complement(311295..311741) Methylophaga frappieri 12844641 YP_006292179.1 CDS Q7C_313 NC_017856.1 311794 312588 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine acetyltransferase complement(311794..312588) Methylophaga frappieri 12844642 YP_006292180.1 CDS Q7C_314 NC_017856.1 312585 313319 R PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA:Cm32/Um32 methyltransferase complement(312585..313319) Methylophaga frappieri 12844643 YP_006292181.1 CDS Q7C_315 NC_017856.1 313316 314347 R PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(313316..314347) Methylophaga frappieri 12844644 YP_006292182.1 CDS Q7C_317 NC_017856.1 314689 314889 R hypothetical protein complement(314689..314889) Methylophaga frappieri 12844646 YP_006292183.1 CDS Q7C_318 NC_017856.1 314957 317140 R PFAM: Subtilase family; subtilisin-like serine protease complement(314957..317140) Methylophaga frappieri 12844647 YP_006292184.1 CDS Q7C_319 NC_017856.1 317137 318246 R PFAM: ATPase family associated with various cellular activities (AAA); ATPase complement(317137..318246) Methylophaga frappieri 12844648 YP_006292185.1 CDS Q7C_320 NC_017856.1 318248 318370 D hypothetical protein 318248..318370 Methylophaga frappieri 12844649 YP_006292186.1 CDS Q7C_321 NC_017856.1 319175 319546 R transposase complement(319175..319546) Methylophaga frappieri 12844650 YP_006292187.1 CDS Q7C_322 NC_017856.1 319579 319875 R PFAM: Transposase; transposase complement(319579..319875) Methylophaga frappieri 12844651 YP_006292188.1 CDS Q7C_323 NC_017856.1 320886 321635 R PFAM: Nucleoside-specific channel-forming protein, Tsx; nucleoside-binding outer membrane protein complement(320886..321635) Methylophaga frappieri 12844652 YP_006292189.1 CDS Q7C_324 NC_017856.1 321695 323680 R PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); Serine phosphatase RsbU, regulator of sigma subunit complement(321695..323680) Methylophaga frappieri 12844653 YP_006292190.1 CDS Q7C_325 NC_017856.1 323710 324504 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(323710..324504) Methylophaga frappieri 12844654 YP_006292191.1 CDS Q7C_326 NC_017856.1 324564 324944 R PFAM: Domain of unknown function (DUF1987); hypothetical protein complement(324564..324944) Methylophaga frappieri 12844655 YP_006292192.1 CDS Q7C_327 NC_017856.1 324959 325498 R hypothetical protein complement(324959..325498) Methylophaga frappieri 12844656 YP_006292193.1 CDS Q7C_328 NC_017856.1 325650 326129 R PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin complement(325650..326129) Methylophaga frappieri 12844657 YP_006292194.1 CDS Q7C_329 NC_017856.1 326375 326596 R PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase complement(326375..326596) Methylophaga frappieri 12844658 YP_006292195.1 CDS Q7C_330 NC_017856.1 326747 327445 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein 326747..327445 Methylophaga frappieri 12844659 YP_006292196.1 CDS Q7C_331 NC_017856.1 327447 328745 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein complement(327447..328745) Methylophaga frappieri 12844660 YP_006292197.1 CDS Q7C_332 NC_017856.1 328748 329782 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane-fatty-acyl-phospholipid synthase-like protein complement(328748..329782) Methylophaga frappieri 12844661 YP_006292198.1 CDS Q7C_333 NC_017856.1 329769 330542 R PFAM: Protein of unknown function (DUF1295); hypothetical protein complement(329769..330542) Methylophaga frappieri 12844662 YP_006292199.1 CDS Q7C_334 NC_017856.1 330529 331068 R PFAM: Protein of unknown function (DUF2878); hypothetical protein complement(330529..331068) Methylophaga frappieri 12844663 YP_006292200.1 CDS Q7C_335 NC_017856.1 331070 332323 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; S-adenosyl-L-methionine dependent methyltransferase complement(331070..332323) Methylophaga frappieri 12844664 YP_006292201.1 CDS Q7C_336 NC_017856.1 332295 333101 R PFAM: Protein of unknown function (DUF1365); hypothetical protein complement(332295..333101) Methylophaga frappieri 12844665 YP_006292202.1 CDS Q7C_337 NC_017856.1 333091 334353 R PFAM: Flavin containing amine oxidoreductase; Amine oxidase complement(333091..334353) Methylophaga frappieri 12844666 YP_006292203.1 CDS Q7C_338 NC_017856.1 334350 335270 R PFAM: Fatty acid desaturase; Fatty acid desaturase, Delta-9 fatty acid desaturase complement(334350..335270) Methylophaga frappieri 12844667 YP_006292204.1 CDS Q7C_339 NC_017856.1 335478 335957 D hypothetical protein 335478..335957 Methylophaga frappieri 12844668 YP_006292205.1 CDS Q7C_340 NC_017856.1 335954 336490 D hypothetical protein 335954..336490 Methylophaga frappieri 12844669 YP_006292206.1 CDS Q7C_341 NC_017856.1 336487 337371 R PFAM: Tetratricopeptide repeat; TPR repeat containing protein complement(336487..337371) Methylophaga frappieri 12844670 YP_006292207.1 CDS Q7C_342 NC_017856.1 337356 338798 R PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; Aspartokinase associated with ectoine biosynthesis complement(337356..338798) Methylophaga frappieri 12844671 YP_006292208.1 CDS Q7C_343 NC_017856.1 338837 339289 R PFAM: Ectoine synthase; L-ectoine synthase complement(338837..339289) Methylophaga frappieri 12844672 YP_006292209.1 CDS Q7C_344 NC_017856.1 339308 340636 R PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-pyruvate aminotransferase complement(339308..340636) Methylophaga frappieri 12844673 YP_006292210.1 CDS Q7C_345 NC_017856.1 340675 341193 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase complement(340675..341193) Methylophaga frappieri 12844674 YP_006292211.1 CDS Q7C_346 NC_017856.1 341433 342017 D PFAM: MarR family; regulatory protein associated with the ectoine operon 341433..342017 Methylophaga frappieri 12844675 YP_006292212.1 CDS Q7C_347 NC_017856.1 342020 343066 R PFAM: Aldo/keto reductase family; aldo/keto reductase complement(342020..343066) Methylophaga frappieri 12844676 YP_006292213.1 CDS Q7C_348 NC_017856.1 343187 344092 R PFAM: Putative neutral zinc metallopeptidase; YpfJ protein, zinc metalloprotease superfamily complement(343187..344092) Methylophaga frappieri 12844677 YP_006292214.1 CDS Q7C_350 NC_017856.1 344364 346700 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; phosphoenolpyruvate synthase complement(344364..346700) Methylophaga frappieri 12844679 YP_006292215.1 CDS Q7C_351 NC_017856.1 346742 347533 R PFAM: Domain of unknown function (DUF299); hypothetical protein complement(346742..347533) Methylophaga frappieri 12844680 YP_006292216.1 CDS Q7C_352 NC_017856.1 347894 348256 R PFAM: MerR family regulatory protein; MerR family transcriptional regulator complement(347894..348256) Methylophaga frappieri 12844681 YP_006292217.1 CDS Q7C_353 NC_017856.1 348240 348536 R PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; integration host factor subunit alpha complement(348240..348536) Methylophaga frappieri 12844682 YP_006292218.1 CDS Q7C_354 NC_017856.1 348573 350948 R PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta complement(348573..350948) Methylophaga frappieri 12844683 YP_006292219.1 CDS Q7C_355 NC_017856.1 350964 352001 R PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha complement(350964..352001) Methylophaga frappieri 12844684 YP_006292220.1 CDS Q7C_356 NC_017856.1 352110 352469 R PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(352110..352469) Methylophaga frappieri 12844685 YP_006292221.1 CDS Q7C_357 NC_017856.1 352485 352682 R PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(352485..352682) Methylophaga frappieri 12844686 YP_006292222.1 CDS Q7C_358 NC_017856.1 352712 353140 R PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 complement(352712..353140) Methylophaga frappieri 12844687 YP_006292223.1 CDS Q7C_359 NC_017856.1 353232 355160 R PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; Threonyl-tRNA synthetase complement(353232..355160) Methylophaga frappieri 12844688 YP_006292224.1 CDS Q7C_361 NC_017856.1 355363 357375 R PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B complement(355363..357375) Methylophaga frappieri 12844690 YP_006292225.1 CDS Q7C_362 NC_017856.1 357451 358641 D PFAM: Aminotransferase class I and II; Aspartate aminotransferase 357451..358641 Methylophaga frappieri 12844691 YP_006292226.1 CDS Q7C_364 NC_017856.1 358876 359901 R AraC family transcriptional regulator complement(358876..359901) Methylophaga frappieri 12844693 YP_006292227.1 CDS Q7C_365 NC_017856.1 359904 360818 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(359904..360818) Methylophaga frappieri 12844694 YP_006292228.1 CDS Q7C_366 NC_017856.1 361031 361201 R hypothetical protein complement(361031..361201) Methylophaga frappieri 12844695 YP_006292229.1 CDS Q7C_367 NC_017856.1 361188 363707 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor; TonB-dependent receptor 361188..363707 Methylophaga frappieri 12844696 YP_006292230.1 CDS Q7C_368 NC_017856.1 363798 365651 D PFAM: Phytase; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) 363798..365651 Methylophaga frappieri 12844697 YP_006292231.1 CDS Q7C_369 NC_017856.1 365667 366362 D PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; MotA/TolQ/ExbB proton channel family protein 365667..366362 Methylophaga frappieri 12844698 YP_006292232.1 CDS Q7C_370 NC_017856.1 366415 366825 D PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; Tol biopolymer transport system, TolR protein 366415..366825 Methylophaga frappieri 12844699 YP_006292233.1 CDS Q7C_371 NC_017856.1 366815 367642 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 366815..367642 Methylophaga frappieri 12844700 YP_006292234.1 CDS Q7C_372 NC_017856.1 367709 369604 D PFAM: Bacterial protein of unknown function (DUF839); phosphatase 367709..369604 Methylophaga frappieri 12844701 YP_006292235.1 CDS Q7C_373 NC_017856.1 369889 371193 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; Methyl-accepting chemotaxis protein complement(369889..371193) Methylophaga frappieri 12844702 YP_006292236.1 CDS Q7C_374 NC_017856.1 371608 373401 D PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; Sulfite reductase (NADPH) flavoprotein alpha-component 371608..373401 Methylophaga frappieri 12844703 YP_006292237.1 CDS Q7C_375 NC_017856.1 373404 375107 D PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) hemoprotein beta-component 373404..375107 Methylophaga frappieri 12844704 YP_006292238.1 CDS Q7C_376 NC_017856.1 375132 376364 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Oxidoreductase (flavoprotein) 375132..376364 Methylophaga frappieri 12844705 YP_006292239.1 CDS Q7C_377 NC_017856.1 376463 377164 D PFAM: 4'-phosphopantetheinyl transferase superfamily; 4'-phosphopantetheinyl transferase entD( ) 376463..377164 Methylophaga frappieri 12844706 YP_006292240.1 CDS Q7C_378 NC_017856.1 377212 378531 R hypothetical protein complement(377212..378531) Methylophaga frappieri 12844707 YP_006292241.1 CDS Q7C_379 NC_017856.1 378549 379325 R PFAM: Protein of unknown function (DUF1329); outer membrane lipoprotein-sorting protein complement(378549..379325) Methylophaga frappieri 12844708 YP_006292242.1 CDS Q7C_380 NC_017856.1 379373 379552 R hypothetical protein complement(379373..379552) Methylophaga frappieri 12844709 YP_006292243.1 CDS Q7C_381 NC_017856.1 379543 381663 R PFAM: MMPL family; RND superfamily exporter complement(379543..381663) Methylophaga frappieri 12844710 YP_006292244.1 CDS Q7C_382 NC_017856.1 381688 383445 R PFAM: ABC transporter transmembrane region; ABC transporter; HlyB/MsbA family ABC transporter complement(381688..383445) Methylophaga frappieri 12844711 YP_006292245.1 CDS Q7C_383 NC_017856.1 383438 385225 R PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter ATP-binding protein/permease complement(383438..385225) Methylophaga frappieri 12844712 YP_006292246.1 CDS Q7C_384 NC_017856.1 385621 388626 D PFAM: chorismate binding enzyme; AMP-binding enzyme; TIGRFAM: salicylate synthase; 2,3-dihydroxybenzoate-AMP ligase; iron aquisition 2,3-dihydroxybenzoate-AMP ligase 385621..388626 Methylophaga frappieri 12844713 YP_006292247.1 CDS Q7C_385 NC_017856.1 388626 398468 D PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; iron aquisition yersiniabactin synthesis enzyme (Irp2) 388626..398468 Methylophaga frappieri 12844714 YP_006292248.1 CDS Q7C_386 NC_017856.1 398465 403024 D PFAM: Phosphopantetheine attachment site; Male sterility protein; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; thioester reductase domain; putative non-ribosomal peptide synthetase 398465..403024 Methylophaga frappieri 12844715 YP_006292249.1 CDS Q7C_387 NC_017856.1 403081 403896 D PFAM: Thioesterase domain; thioesterase 403081..403896 Methylophaga frappieri 12844716 YP_006292250.1 CDS Q7C_388 NC_017856.1 403998 404957 D PFAM: Periplasmic binding protein; ABC-type transporter, periplasmic component 403998..404957 Methylophaga frappieri 12844717 YP_006292251.1 CDS Q7C_389 NC_017856.1 404982 405989 D PFAM: FecCD transport family; iron chelate uptake ABC transporter (FeCT) family, permease protein 404982..405989 Methylophaga frappieri 12844718 YP_006292252.1 CDS Q7C_390 NC_017856.1 406127 407077 D PFAM: FecCD transport family; transport system permease 406127..407077 Methylophaga frappieri 12844719 YP_006292253.1 CDS Q7C_391 NC_017856.1 407077 407880 D PFAM: ABC transporter; The iron-vibriobactin/enterobactin uptake porter 407077..407880 Methylophaga frappieri 12844720 YP_006292254.1 CDS Q7C_392 NC_017856.1 407907 408782 D PFAM: ABC transporter; ABC transporter ATP-binding protein 407907..408782 Methylophaga frappieri 12844721 YP_006292255.1 CDS Q7C_393 NC_017856.1 408798 412442 D hypothetical protein 408798..412442 Methylophaga frappieri 12844722 YP_006292256.1 CDS Q7C_394 NC_017856.1 412489 412719 D PFAM: Phosphopantetheine attachment site; aryl carrier domain-containing protein 412489..412719 Methylophaga frappieri 12844723 YP_006292257.1 CDS Q7C_395 NC_017856.1 412774 414168 D hypothetical protein 412774..414168 Methylophaga frappieri 12844724 YP_006292258.1 CDS Q7C_396 NC_017856.1 414302 416428 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 414302..416428 Methylophaga frappieri 12844725 YP_006292259.1 CDS Q7C_397 NC_017856.1 416594 417667 D PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase-like oxidoreductase 416594..417667 Methylophaga frappieri 12844726 YP_006292260.1 CDS Q7C_398 NC_017856.1 417678 419588 D PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase-like oxidoreductase 417678..419588 Methylophaga frappieri 12844727 YP_006292261.1 CDS Q7C_399 NC_017856.1 419643 420569 R DNA-binding domain-containing protein complement(419643..420569) Methylophaga frappieri 12844728 YP_006292262.1 CDS Q7C_400 NC_017856.1 420820 422478 D PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ABC transporter ATP-binding protein 420820..422478 Methylophaga frappieri 12844729 YP_006292263.1 CDS Q7C_401 NC_017856.1 422530 422793 D hypothetical protein 422530..422793 Methylophaga frappieri 12844730 YP_006292264.1 CDS Q7C_402 NC_017856.1 423002 424762 D PFAM: Sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; D-glycerate 3-kinase , plant type 423002..424762 Methylophaga frappieri 12844731 YP_006292265.1 CDS Q7C_403 NC_017856.1 424755 425978 D glycosyltransferase 424755..425978 Methylophaga frappieri 12844732 YP_006292266.1 CDS Q7C_404 NC_017856.1 425975 427726 D PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 425975..427726 Methylophaga frappieri 12844733 YP_006292267.1 CDS Q7C_405 NC_017856.1 427797 428648 D PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 427797..428648 Methylophaga frappieri 12844734 YP_006292268.1 CDS Q7C_406 NC_017856.1 428664 429200 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator containing a CheY-like receiver domain and a GGDEF domain 428664..429200 Methylophaga frappieri 12844735 YP_006292269.1 CDS Q7C_407 NC_017856.1 429383 429520 R hypothetical protein complement(429383..429520) Methylophaga frappieri 12844736 YP_006292270.1 CDS Q7C_408 NC_017856.1 429651 431378 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; cyanophycin synthetase 429651..431378 Methylophaga frappieri 12844737 YP_006292271.1 CDS Q7C_409 NC_017856.1 431375 432880 D PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 431375..432880 Methylophaga frappieri 12844738 YP_006292272.1 CDS Q7C_410 NC_017856.1 432950 434287 R PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; TrmA family RNA methyltransferase complement(432950..434287) Methylophaga frappieri 12844739 YP_006292273.1 CDS Q7C_411 NC_017856.1 434353 434946 R PFAM: Protein of unknown function (DUF1318); hypothetical protein complement(434353..434946) Methylophaga frappieri 12844740 YP_006292274.1 CDS Q7C_412 NC_017856.1 434957 437017 R hypothetical protein complement(434957..437017) Methylophaga frappieri 12844741 YP_006292275.1 CDS Q7C_413 NC_017856.1 437017 437901 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; Cysteine synthase B complement(437017..437901) Methylophaga frappieri 12844742 YP_006292276.1 CDS Q7C_414 NC_017856.1 437901 438287 R PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase; Holo-(acyl-carrier protein) synthase complement(437901..438287) Methylophaga frappieri 12844743 YP_006292277.1 CDS Q7C_415 NC_017856.1 438284 439012 R PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase complement(438284..439012) Methylophaga frappieri 12844744 YP_006292278.1 CDS Q7C_416 NC_017856.1 439009 439743 R PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA recombination and repair protein RecO complement(439009..439743) Methylophaga frappieri 12844745 YP_006292279.1 CDS Q7C_417 NC_017856.1 439752 440657 R PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era complement(439752..440657) Methylophaga frappieri 12844746 YP_006292280.1 CDS Q7C_418 NC_017856.1 440654 441337 R PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; Ribonuclease III complement(440654..441337) Methylophaga frappieri 12844747 YP_006292281.1 CDS Q7C_419 NC_017856.1 441334 441723 R hypothetical protein complement(441334..441723) Methylophaga frappieri 12844748 YP_006292282.1 CDS Q7C_420 NC_017856.1 441734 442495 R PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Signal peptidase I complement(441734..442495) Methylophaga frappieri 12844749 YP_006292283.1 CDS Q7C_421 NC_017856.1 442511 444307 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; translation elongation factor LepA complement(442511..444307) Methylophaga frappieri 12844750 YP_006292284.1 CDS Q7C_422 NC_017856.1 444533 446449 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein complement(444533..446449) Methylophaga frappieri 12844751 YP_006292285.1 CDS Q7C_423 NC_017856.1 446623 447984 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(446623..447984) Methylophaga frappieri 12844752 YP_006292286.1 CDS Q7C_424 NC_017856.1 447981 448664 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR complement(447981..448664) Methylophaga frappieri 12844753 YP_006292287.1 CDS Q7C_425 NC_017856.1 448788 450221 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Serine protease MucD/AlgY associated with sigma factor RpoE complement(448788..450221) Methylophaga frappieri 12844754 YP_006292288.1 CDS Q7C_426 NC_017856.1 450218 450643 R PFAM: Positive regulator of sigma(E), RseC/MucC; Sigma factor RpoE regulatory protein RseC complement(450218..450643) Methylophaga frappieri 12844755 YP_006292289.1 CDS Q7C_427 NC_017856.1 450640 451620 R PFAM: MucB/RseB family; Sigma factor RpoE negative regulatory protein RseB precursor complement(450640..451620) Methylophaga frappieri 12844756 YP_006292290.1 CDS Q7C_428 NC_017856.1 451623 452198 R PFAM: Anti sigma-E protein RseA, N-terminal domain; Anti sigma-E protein RseA complement(451623..452198) Methylophaga frappieri 12844757 YP_006292291.1 CDS Q7C_429 NC_017856.1 452202 452777 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE; RNA polymerase sigma factor RpoE complement(452202..452777) Methylophaga frappieri 12844758 YP_006292292.1 CDS Q7C_430 NC_017856.1 452900 454510 D PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 452900..454510 Methylophaga frappieri 12844759 YP_006292293.1 CDS Q7C_431 NC_017856.1 454485 454838 R hypothetical protein complement(454485..454838) Methylophaga frappieri 12844760 YP_006292294.1 CDS Q7C_432 NC_017856.1 454967 455863 D PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 454967..455863 Methylophaga frappieri 12844761 YP_006292295.1 CDS Q7C_433 NC_017856.1 455860 457245 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; type IV fimbriae expression regulatory protein PilR complement(455860..457245) Methylophaga frappieri 12844762 YP_006292296.1 CDS Q7C_434 NC_017856.1 457242 458819 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor PilS complement(457242..458819) Methylophaga frappieri 12844763 YP_006292297.1 CDS Q7C_435 NC_017856.1 458812 459045 R hypothetical protein complement(458812..459045) Methylophaga frappieri 12844764 YP_006292298.1 CDS Q7C_436 NC_017856.1 459108 460937 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA complement(459108..460937) Methylophaga frappieri 12844765 YP_006292299.1 CDS Q7C_437 NC_017856.1 461000 461794 R PFAM: Inositol monophosphatase family; Inositol-1-monophosphatase complement(461000..461794) Methylophaga frappieri 12844766 YP_006292300.1 CDS Q7C_438 NC_017856.1 462025 462324 D PFAM: Protein of unknown function (DUF3359); hypothetical protein 462025..462324 Methylophaga frappieri 12844767 YP_006292301.1 CDS Q7C_439 NC_017856.1 462389 463552 R PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG family protein complement(462389..463552) Methylophaga frappieri 12844768 YP_006292302.1 CDS Q7C_440 NC_017856.1 463694 464476 D TIGRFAM: outer membrane assembly lipoprotein YfiO; component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) 463694..464476 Methylophaga frappieri 12844769 YP_006292303.1 CDS Q7C_441 NC_017856.1 464526 464864 R PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(464526..464864) Methylophaga frappieri 12844770 YP_006292304.1 CDS Q7C_442 NC_017856.1 464874 466514 R PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD synthetase glutamine amidotransferase subunit complement(464874..466514) Methylophaga frappieri 12844771 YP_006292305.1 CDS Q7C_443 NC_017856.1 466511 467392 R PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA ligase (ADP-forming) subunit alpha complement(466511..467392) Methylophaga frappieri 12844772 YP_006292306.1 CDS Q7C_444 NC_017856.1 467389 468561 R PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta complement(467389..468561) Methylophaga frappieri 12844773 YP_006292307.1 CDS Q7C_445 NC_017856.1 468693 469289 D PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; proline iminopeptidase 468693..469289 Methylophaga frappieri 12844774 YP_006292308.1 CDS Q7C_446 NC_017856.1 469537 469665 D hypothetical protein 469537..469665 Methylophaga frappieri 12844775 YP_006292309.1 CDS Q7C_447 NC_017856.1 469662 470099 D PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 469662..470099 Methylophaga frappieri 12844776 YP_006292310.1 CDS Q7C_448 NC_017856.1 470103 470726 D hypothetical protein 470103..470726 Methylophaga frappieri 12844777 YP_006292311.1 CDS Q7C_449 NC_017856.1 470714 473650 R PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(470714..473650) Methylophaga frappieri 12844778 YP_006292312.1 CDS Q7C_450 NC_017856.1 473681 473851 R PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion complement(473681..473851) Methylophaga frappieri 12844779 YP_006292313.1 CDS Q7C_451 NC_017856.1 473894 476341 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; Heavy metal translocating P-type ATPase complement(473894..476341) Methylophaga frappieri 12844780 YP_006292314.1 CDS Q7C_452 NC_017856.1 476361 476864 R PFAM: FixH; integral membrane protein linked to a cation pump complement(476361..476864) Methylophaga frappieri 12844781 YP_006292315.1 CDS Q7C_453 NC_017856.1 476864 478285 R PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG complement(476864..478285) Methylophaga frappieri 12844782 YP_006292316.1 CDS Q7C_454 NC_017856.1 478274 478402 D hypothetical protein 478274..478402 Methylophaga frappieri 12844783 YP_006292317.1 CDS Q7C_455 NC_017856.1 478418 478540 R hypothetical protein complement(478418..478540) Methylophaga frappieri 12844784 YP_006292318.1 CDS Q7C_456 NC_017856.1 478585 479511 R PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; Cytochrome c oxidase subunit CcoP complement(478585..479511) Methylophaga frappieri 12844785 YP_006292319.1 CDS Q7C_457 NC_017856.1 479504 479716 R PFAM: Cbb3-type cytochrome oxidase component FixQ; Cbb3-type cytochrome oxidase component FixQ complement(479504..479716) Methylophaga frappieri 12844786 YP_006292320.1 CDS Q7C_458 NC_017856.1 479709 480386 R PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; Cytochrome c oxidase subunit CcoO complement(479709..480386) Methylophaga frappieri 12844787 YP_006292321.1 CDS Q7C_459 NC_017856.1 480397 481821 R PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Cytochrome c oxidase subunit CcoN complement(480397..481821) Methylophaga frappieri 12844788 YP_006292322.1 CDS Q7C_460 NC_017856.1 482140 482544 R PFAM: Protein of unknown function (DUF498/DUF598); hypothetical protein complement(482140..482544) Methylophaga frappieri 12844789 YP_006292323.1 CDS Q7C_461 NC_017856.1 482548 482841 R PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; integration host factor subunit beta complement(482548..482841) Methylophaga frappieri 12844790 YP_006292324.1 CDS Q7C_462 NC_017856.1 482960 484633 R PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 complement(482960..484633) Methylophaga frappieri 12844791 YP_006292325.1 CDS Q7C_463 NC_017856.1 484752 485417 R PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase complement(484752..485417) Methylophaga frappieri 12844792 YP_006292326.1 CDS Q7C_464 NC_017856.1 485410 486729 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-Enolpyruvylshikimate-3-phosphate synthase complement(485410..486729) Methylophaga frappieri 12844793 YP_006292327.1 CDS Q7C_465 NC_017856.1 486747 487634 R PFAM: Prephenate dehydrogenase; cyclohexadienyl dehydrogenase complement(486747..487634) Methylophaga frappieri 12844794 YP_006292328.1 CDS Q7C_466 NC_017856.1 487627 488721 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Biosynthetic Aromatic amino acid aminotransferase beta complement(487627..488721) Methylophaga frappieri 12844795 YP_006292329.1 CDS Q7C_467 NC_017856.1 488718 489185 R PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase complement(488718..489185) Methylophaga frappieri 12844796 YP_006292330.1 CDS Q7C_468 NC_017856.1 489192 491930 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(489192..491930) Methylophaga frappieri 12844797 YP_006292331.1 CDS Q7C_469 NC_017856.1 492151 492444 D PFAM: Protein of unknown function (DUF3579); hypothetical protein 492151..492444 Methylophaga frappieri 12844798 YP_006292332.1 CDS Q7C_470 NC_017856.1 492448 492900 R PFAM: CBS domain; Inosine-5'-monophosphate dehydrogenase complement(492448..492900) Methylophaga frappieri 12844799 YP_006292333.1 CDS Q7C_471 NC_017856.1 493009 495309 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; formate dehydrogenase oxidoreductase protein complement(493009..495309) Methylophaga frappieri 12844800 YP_006292334.1 CDS Q7C_472 NC_017856.1 495596 497176 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 complement(495596..497176) Methylophaga frappieri 12844801 YP_006292335.1 CDS Q7C_473 NC_017856.1 497433 497915 R PFAM: Peptidase S24-like; Phage repressor complement(497433..497915) Methylophaga frappieri 12844802 YP_006292336.1 CDS Q7C_474 NC_017856.1 497904 498059 D hypothetical protein 497904..498059 Methylophaga frappieri 12844803 YP_006292337.1 CDS Q7C_475 NC_017856.1 498198 498449 D hypothetical protein 498198..498449 Methylophaga frappieri 12844804 YP_006292338.1 CDS Q7C_478 NC_017856.1 499360 500022 D FIG01201693; hypothetical protein 499360..500022 Methylophaga frappieri 12844806 YP_006292339.1 CDS Q7C_479 NC_017856.1 500009 500557 D PFAM: Transglycosylase SLT domain; hypothetical protein 500009..500557 Methylophaga frappieri 12844807 YP_006292340.1 CDS Q7C_480 NC_017856.1 500554 500853 D PFAM: Flagellar transcriptional activator (FlhD); transcriptional activator 500554..500853 Methylophaga frappieri 12844808 YP_006292341.1 CDS Q7C_481 NC_017856.1 500850 501383 D PFAM: Flagellar transcriptional activator (FlhC); transcriptional activator 500850..501383 Methylophaga frappieri 12844809 YP_006292342.1 CDS Q7C_482 NC_017856.1 501750 501872 D hypothetical protein 501750..501872 Methylophaga frappieri 12844810 YP_006292343.1 CDS Q7C_483 NC_017856.1 501905 505474 R PFAM: TraG-like protein, N-terminal region; IncF plasmid conjugative transfer protein TraG complement(501905..505474) Methylophaga frappieri 12844811 YP_006292344.1 CDS Q7C_484 NC_017856.1 505478 506866 R PFAM: Conjugative relaxosome accessory transposon protein; IncF plasmid conjugative transfer pilus assembly protein TraH complement(505478..506866) Methylophaga frappieri 12844812 YP_006292345.1 CDS Q7C_485 NC_017856.1 506869 507813 R TIGRFAM: TraF-like protein; IncF plasmid conjugative transfer pilus assembly protein TraF complement(506869..507813) Methylophaga frappieri 12844813 YP_006292346.1 CDS Q7C_486 NC_017856.1 507937 509847 R hypothetical protein complement(507937..509847) Methylophaga frappieri 12844814 YP_006292347.1 CDS Q7C_487 NC_017856.1 509844 511658 R recombinase D complement(509844..511658) Methylophaga frappieri 12844815 YP_006292348.1 CDS Q7C_488 NC_017856.1 512254 512604 D PFAM: IS66 Orf2 like protein; IS66 Orf2 family protein 512254..512604 Methylophaga frappieri 12844816 YP_006292349.1 CDS Q7C_489 NC_017856.1 512661 514253 D PFAM: Transposase IS66 family; ISPsy5, transposase 512661..514253 Methylophaga frappieri 12844817 YP_006292350.1 CDS Q7C_490 NC_017856.1 514417 515913 D PFAM: Putative transposase; transposase InsA 514417..515913 Methylophaga frappieri 12844818 YP_006292351.1 CDS Q7C_491 NC_017856.1 516452 517879 R PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(516452..517879) Methylophaga frappieri 12844819 YP_006292352.1 CDS Q7C_492 NC_017856.1 518209 520305 R PFAM: Peptidase family M50; peptidase M50 complement(518209..520305) Methylophaga frappieri 12844820 YP_006292353.1 CDS Q7C_493 NC_017856.1 520302 521621 R PFAM: HlyD family secretion protein; Membrane-fusion protein complement(520302..521621) Methylophaga frappieri 12844821 YP_006292354.1 CDS Q7C_494 NC_017856.1 521676 521795 D hypothetical protein 521676..521795 Methylophaga frappieri 12844822 YP_006292355.1 CDS Q7C_495 NC_017856.1 521796 522608 R multidrug resistance efflux pump complement(521796..522608) Methylophaga frappieri 12844823 YP_006292356.1 CDS Q7C_496 NC_017856.1 522609 524513 R PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(522609..524513) Methylophaga frappieri 12844824 YP_006292357.1 CDS Q7C_497 NC_017856.1 524590 527217 R TIGRFAM: VCBS repeat; VCBS repeat-containing protein complement(524590..527217) Methylophaga frappieri 12844825 YP_006292358.1 CDS Q7C_498 NC_017856.1 527243 528154 R hypothetical protein complement(527243..528154) Methylophaga frappieri 12844826 YP_006292359.1 CDS Q7C_499 NC_017856.1 528114 530972 R hypothetical protein complement(528114..530972) Methylophaga frappieri 12844827 YP_006292360.1 CDS Q7C_500 NC_017856.1 530975 531403 R hypothetical protein complement(530975..531403) Methylophaga frappieri 12844828 YP_006292361.1 CDS Q7C_501 NC_017856.1 531561 538856 R hypothetical protein complement(531561..538856) Methylophaga frappieri 12844829 YP_006292362.1 CDS Q7C_502 NC_017856.1 539303 539458 D PFAM: Protein of unknown function (DUF3461); hypothetical protein 539303..539458 Methylophaga frappieri 12844830 YP_006292363.1 CDS Q7C_503 NC_017856.1 539508 541061 R PFAM: SpoVR like protein; SpoVR-like protein complement(539508..541061) Methylophaga frappieri 12844831 YP_006292364.1 CDS Q7C_504 NC_017856.1 541359 542807 D PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; filamentous hemagglutinin 541359..542807 Methylophaga frappieri 12844832 YP_006292365.1 CDS Q7C_505 NC_017856.1 542800 543654 R recombinase D complement(542800..543654) Methylophaga frappieri 12844833 YP_006292366.1 CDS Q7C_506 NC_017856.1 544213 544947 R FIG01203050; hypothetical protein complement(544213..544947) Methylophaga frappieri 12844834 YP_006292367.1 CDS Q7C_507 NC_017856.1 545037 546104 R PFAM: Zinc-binding domain of primase-helicase; Phage P4 alpha, zinc-binding domain-containing protein complement(545037..546104) Methylophaga frappieri 12844835 YP_006292368.1 CDS Q7C_508 NC_017856.1 546195 546536 R FIG01201340; hypothetical protein complement(546195..546536) Methylophaga frappieri 12844836 YP_006292369.1 CDS Q7C_509 NC_017856.1 546536 547033 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC complement(546536..547033) Methylophaga frappieri 12844837 YP_006292370.1 CDS Q7C_510 NC_017856.1 547120 548775 R PFAM: von Willebrand factor type A domain; Cobalamin biosynthesis protein CobT; similar to APECO1_O1R37; Plasmid associated gene product complement(547120..548775) Methylophaga frappieri 12844838 YP_006292371.1 CDS Q7C_511 NC_017856.1 548845 549285 R FIG01205919; hypothetical protein complement(548845..549285) Methylophaga frappieri 12844839 YP_006292372.1 CDS Q7C_512 NC_017856.1 549347 550300 R PFAM: Protein of unknown function (DUF3150); Cobalamine biosynthesis protein complement(549347..550300) Methylophaga frappieri 12844840 YP_006292373.1 CDS Q7C_513 NC_017856.1 550399 551166 R hypothetical protein complement(550399..551166) Methylophaga frappieri 12844841 YP_006292374.1 CDS Q7C_514 NC_017856.1 551166 552125 R PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; Aerobic cobaltochelatase CobS subunit complement(551166..552125) Methylophaga frappieri 12844842 YP_006292375.1 CDS Q7C_515 NC_017856.1 552335 553351 R PFAM: YqaJ-like viral recombinase domain; TIGRFAM: putative phage-type endonuclease; phage-type endonuclease complement(552335..553351) Methylophaga frappieri 12844843 YP_006292376.1 CDS Q7C_516 NC_017856.1 553412 553555 R FIG01200802; hypothetical protein complement(553412..553555) Methylophaga frappieri 12844844 YP_006292377.1 CDS Q7C_517 NC_017856.1 553639 554457 R PFAM: RecT family; TIGRFAM: phage recombination protein Bet; Recombination protein BET complement(553639..554457) Methylophaga frappieri 12844845 YP_006292378.1 CDS Q7C_518 NC_017856.1 554567 554956 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein complement(554567..554956) Methylophaga frappieri 12844846 YP_006292379.1 CDS Q7C_519 NC_017856.1 554972 555298 R FIG01202003; hypothetical protein complement(554972..555298) Methylophaga frappieri 12844847 YP_006292380.1 CDS Q7C_520 NC_017856.1 555666 556268 D FIG01202318; hypothetical protein 555666..556268 Methylophaga frappieri 12844848 YP_006292381.1 CDS Q7C_521 NC_017856.1 556596 557417 D PFAM: Glycosyl transferase family 2; glycosyltransferase 556596..557417 Methylophaga frappieri 12844849 YP_006292382.1 CDS Q7C_522 NC_017856.1 557410 560463 D PFAM: Glycosyl transferase family 2; glycosyltransferase 557410..560463 Methylophaga frappieri 12844850 YP_006292383.1 CDS Q7C_523 NC_017856.1 561185 562066 R PFAM: Radical SAM superfamily; molybdenum cofactor biosynthesis family protein complement(561185..562066) Methylophaga frappieri 12844851 YP_006292384.1 CDS Q7C_524 NC_017856.1 562388 566080 R PFAM: Mating pair stabilisation protein TraN; IncF plasmid conjugative transfer protein TraN complement(562388..566080) Methylophaga frappieri 12844852 YP_006292385.1 CDS Q7C_525 NC_017856.1 566083 567111 R PFAM: TraU protein; IncF plasmid conjugative transfer pilus assembly protein TraU complement(566083..567111) Methylophaga frappieri 12844853 YP_006292386.1 CDS Q7C_526 NC_017856.1 567095 568219 R PFAM: Type-F conjugative transfer system pilin assembly protein; IncF plasmid conjugative transfer pilus assembly protein TraW complement(567095..568219) Methylophaga frappieri 12844854 YP_006292387.1 CDS Q7C_527 NC_017856.1 568230 568742 R PFAM: Peptidase S26; Conjugative signal peptidase TrhF complement(568230..568742) Methylophaga frappieri 12844855 YP_006292388.1 CDS Q7C_528 NC_017856.1 568726 569073 R Conjugative transfer protein 345 complement(568726..569073) Methylophaga frappieri 12844856 YP_006292389.1 CDS Q7C_529 NC_017856.1 569066 571465 R PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC; IncF plasmid conjugative transfer pilus assembly protein TraC complement(569066..571465) Methylophaga frappieri 12844857 YP_006292390.1 CDS Q7C_530 NC_017856.1 571465 572157 R PFAM: Disulfide bond isomerase protein N-terminus; Thiol:disulfide involved in conjugative transfer complement(571465..572157) Methylophaga frappieri 12844858 YP_006292391.1 CDS Q7C_531 NC_017856.1 572289 573227 R PFAM: Domain of unknown function (DUF1814); Ync complement(572289..573227) Methylophaga frappieri 12844859 YP_006292392.1 CDS Q7C_532 NC_017856.1 573220 574053 R PFAM: Protein of unknwon function (DUF2893); Ynd complement(573220..574053) Methylophaga frappieri 12844860 YP_006292393.1 CDS Q7C_533 NC_017856.1 574231 574617 R Conjugative transfer protein TraA complement(574231..574617) Methylophaga frappieri 12844861 YP_006292394.1 CDS Q7C_534 NC_017856.1 574614 575264 R PFAM: Type IV conjugative transfer system lipoprotein (TraV); TIGRFAM: type IV conjugative transfer system lipoprotein TraV; Conjugative transfer protein TraV complement(574614..575264) Methylophaga frappieri 12844862 YP_006292395.1 CDS Q7C_535 NC_017856.1 575261 576550 R PFAM: Bacterial conjugation TrbI-like protein; IncF plasmid conjugative transfer pilus assembly protein TraB complement(575261..576550) Methylophaga frappieri 12844863 YP_006292396.1 CDS Q7C_536 NC_017856.1 576550 577449 R PFAM: TraK protein; IncF plasmid conjugative transfer pilus assembly protein TraK complement(576550..577449) Methylophaga frappieri 12844864 YP_006292397.1 CDS Q7C_537 NC_017856.1 577433 578059 R PFAM: TraE protein; TIGRFAM: type IV conjugative transfer system protein TraE; IncF plasmid conjugative transfer pilus assembly protein TraE complement(577433..578059) Methylophaga frappieri 12844865 YP_006292398.1 CDS Q7C_538 NC_017856.1 578056 578337 R PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL; IncF plasmid conjugative transfer pilus assembly protein TraL complement(578056..578337) Methylophaga frappieri 12844866 YP_006292399.1 CDS Q7C_539 NC_017856.1 578518 578841 D PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 578518..578841 Methylophaga frappieri 12844867 YP_006292400.1 CDS Q7C_540 NC_017856.1 578838 579116 D transcriptional regulator 578838..579116 Methylophaga frappieri 12844868 YP_006292401.1 CDS Q7C_541 NC_017856.1 579142 579777 R Conjugative transfer protein s043 complement(579142..579777) Methylophaga frappieri 12844869 YP_006292402.1 CDS Q7C_542 NC_017856.1 579764 580324 R Conjugative transfer protein 234 complement(579764..580324) Methylophaga frappieri 12844870 YP_006292403.1 CDS Q7C_543 NC_017856.1 580334 582154 R TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; IncF plasmid conjugative transfer protein TraD complement(580334..582154) Methylophaga frappieri 12844871 YP_006292404.1 CDS Q7C_544 NC_017856.1 582203 584353 R PFAM: Putative helicase; Conjugative transfer protein TraI, relaxase complement(582203..584353) Methylophaga frappieri 12844872 YP_006292405.1 CDS Q7C_545 NC_017856.1 584434 585831 R hypothetical protein complement(584434..585831) Methylophaga frappieri 12844873 YP_006292406.1 CDS Q7C_546 NC_017856.1 585831 590882 R PFAM: Protein kinase domain; Nuclease-related domain; nuclease-like protein,protein kinase family protein complement(585831..590882) Methylophaga frappieri 12844874 YP_006292407.1 CDS Q7C_547 NC_017856.1 591128 594358 R PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R complement(591128..594358) Methylophaga frappieri 12844875 YP_006292408.1 CDS Q7C_548 NC_017856.1 594355 595650 R PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S complement(594355..595650) Methylophaga frappieri 12844876 YP_006292409.1 CDS Q7C_549 NC_017856.1 595647 595907 R type I restriction-modification system, DNA-methyltransferase subunit M complement(595647..595907) Methylophaga frappieri 12844877 YP_006292410.1 CDS Q7C_550 NC_017856.1 596096 597724 R PFAM: N-6 DNA Methylase; HsdM N-terminal domain; DNA-methyltransferase subunit M complement(596096..597724) Methylophaga frappieri 12844878 YP_006292411.1 CDS Q7C_551 NC_017856.1 597733 598665 R hypothetical protein complement(597733..598665) Methylophaga frappieri 12844879 YP_006292412.1 CDS Q7C_552 NC_017856.1 598987 599286 R hypothetical protein complement(598987..599286) Methylophaga frappieri 12844880 YP_006292413.1 CDS Q7C_553 NC_017856.1 599374 600279 R PFAM: Exonuclease; DNA polymerase III, epsilon subunit-like protein complement(599374..600279) Methylophaga frappieri 12844881 YP_006292414.1 CDS Q7C_554 NC_017856.1 600920 601369 D PFAM: Peptidase S24-like; Error-prone repair protein UmuD 600920..601369 Methylophaga frappieri 12844882 YP_006292415.1 CDS Q7C_555 NC_017856.1 601338 602645 D PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) 601338..602645 Methylophaga frappieri 12844883 YP_006292416.1 CDS Q7C_556 NC_017856.1 602656 603099 R FIG01062327; hypothetical protein complement(602656..603099) Methylophaga frappieri 12844884 YP_006292417.1 CDS Q7C_557 NC_017856.1 603301 603468 R hypothetical protein complement(603301..603468) Methylophaga frappieri 12844885 YP_006292418.1 CDS Q7C_558 NC_017856.1 603564 604538 D TIGRFAM: PRTRC system protein D; Rod shape determination protein 603564..604538 Methylophaga frappieri 12844886 YP_006292419.1 CDS Q7C_559 NC_017856.1 604637 604810 D FIG01202433; hypothetical protein 604637..604810 Methylophaga frappieri 12844887 YP_006292420.1 CDS Q7C_560 NC_017856.1 604812 606053 D PFAM: Phage integrase family; integrase-like protein 604812..606053 Methylophaga frappieri 12844888 YP_006292421.1 CDS Q7C_561 NC_017856.1 606743 606871 R hypothetical protein complement(606743..606871) Methylophaga frappieri 12844889 YP_006292422.1 CDS Q7C_562 NC_017856.1 607020 609074 R PFAM: GAF domain; GGDEF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(607020..609074) Methylophaga frappieri 12844890 YP_006292423.1 CDS Q7C_563 NC_017856.1 609224 610084 R PFAM: Universal stress protein family; Universal stress protein family 4 complement(609224..610084) Methylophaga frappieri 12844891 YP_006292424.1 CDS Q7C_564 NC_017856.1 610093 611583 R PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease complement(610093..611583) Methylophaga frappieri 12844892 YP_006292425.1 CDS Q7C_565 NC_017856.1 611831 613093 D PFAM: Mechanosensitive ion channel; Small-conductance mechanosensitive channel 611831..613093 Methylophaga frappieri 12844893 YP_006292426.1 CDS Q7C_566 NC_017856.1 613232 613744 D MarR family transcriptional regulator 613232..613744 Methylophaga frappieri 12844894 YP_006292427.1 CDS Q7C_567 NC_017856.1 613746 614927 D PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA family multidrug resistance transporter 613746..614927 Methylophaga frappieri 12844895 YP_006292428.1 CDS Q7C_568 NC_017856.1 614992 616359 D PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 614992..616359 Methylophaga frappieri 12844896 YP_006292429.1 CDS Q7C_569 NC_017856.1 616359 617528 D TIGRFAM: RND family efflux transporter, MFP subunit; Membrane fusion protein of RND family multidrug efflux pump 616359..617528 Methylophaga frappieri 12844897 YP_006292430.1 CDS Q7C_570 NC_017856.1 617521 620649 D PFAM: AcrB/AcrD/AcrF family; Acriflavin resistance protein 617521..620649 Methylophaga frappieri 12844898 YP_006292431.1 CDS Q7C_571 NC_017856.1 620653 621420 R PFAM: Protein of unknown function (DUF815); ATP/GTP-binding protein complement(620653..621420) Methylophaga frappieri 12844899 YP_006292432.1 CDS Q7C_572 NC_017856.1 621508 623607 R PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase complement(621508..623607) Methylophaga frappieri 12844900 YP_006292433.1 CDS Q7C_573 NC_017856.1 623793 624062 R PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 complement(623793..624062) Methylophaga frappieri 12844901 YP_006292434.1 CDS Q7C_574 NC_017856.1 624166 625113 R PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B complement(624166..625113) Methylophaga frappieri 12844902 YP_006292435.1 CDS Q7C_575 NC_017856.1 625126 625512 R PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A complement(625126..625512) Methylophaga frappieri 12844903 YP_006292436.1 CDS Q7C_576 NC_017856.1 625512 628277 R PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 complement(625512..628277) Methylophaga frappieri 12844904 YP_006292437.1 CDS Q7C_577 NC_017856.1 628281 629795 R PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; transcription termination protein NusA complement(628281..629795) Methylophaga frappieri 12844905 YP_006292438.1 CDS Q7C_578 NC_017856.1 629871 630317 R PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein complement(629871..630317) Methylophaga frappieri 12844906 YP_006292439.1 CDS Q7C_579 NC_017856.1 630820 632622 R PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; Sulfite reductase (NADPH) flavoprotein alpha-component complement(630820..632622) Methylophaga frappieri 12844907 YP_006292440.1 CDS Q7C_580 NC_017856.1 632712 638147 R PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADPH) large subunit complement(632712..638147) Methylophaga frappieri 12844908 YP_006292441.1 CDS Q7C_582 NC_017856.1 638848 640251 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I); nitrogen regulation protein NR(I) complement(638848..640251) Methylophaga frappieri 12844910 YP_006292442.1 CDS Q7C_583 NC_017856.1 640253 641317 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; nitrogen regulation protein NR(II) complement(640253..641317) Methylophaga frappieri 12844911 YP_006292443.1 CDS Q7C_584 NC_017856.1 641507 642103 R hypothetical protein complement(641507..642103) Methylophaga frappieri 12844912 YP_006292444.1 CDS Q7C_585 NC_017856.1 642177 643586 R PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase complement(642177..643586) Methylophaga frappieri 12844913 YP_006292445.1 CDS Q7C_586 NC_017856.1 643758 643991 R PFAM: SirA-like protein; SirA family protein complement(643758..643991) Methylophaga frappieri 12844914 YP_006292446.1 CDS Q7C_587 NC_017856.1 643988 645043 R PFAM: tRNA methyl transferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase complement(643988..645043) Methylophaga frappieri 12844915 YP_006292447.1 CDS Q7C_588 NC_017856.1 645043 646485 R PFAM: Putative modulator of DNA gyrase; PMID 12029038; TldD protein, part of proposed TldE/TldD proteolytic complex complement(645043..646485) Methylophaga frappieri 12844916 YP_006292448.1 CDS Q7C_589 NC_017856.1 646529 650311 R TIGRFAM: TIGR02099 family protein; hypothetical protein complement(646529..650311) Methylophaga frappieri 12844917 YP_006292449.1 CDS Q7C_590 NC_017856.1 650313 651782 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease G complement(650313..651782) Methylophaga frappieri 12844918 YP_006292450.1 CDS Q7C_591 NC_017856.1 651775 652254 R PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf complement(651775..652254) Methylophaga frappieri 12844919 YP_006292451.1 CDS Q7C_592 NC_017856.1 652362 652799 R PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; LSU m3Psi1915 methyltransferase RlmH / ybeA complement(652362..652799) Methylophaga frappieri 12844920 YP_006292452.1 CDS Q7C_593 NC_017856.1 652829 653179 R PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; Iojap protein complement(652829..653179) Methylophaga frappieri 12844921 YP_006292453.1 CDS Q7C_594 NC_017856.1 653211 654041 R PFAM: DUF218 domain; hypothetical protein complement(653211..654041) Methylophaga frappieri 12844922 YP_006292454.1 CDS Q7C_595 NC_017856.1 654041 654703 R PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase( ) complement(654041..654703) Methylophaga frappieri 12844923 YP_006292455.1 CDS Q7C_596 NC_017856.1 654684 655940 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(654684..655940) Methylophaga frappieri 12844924 YP_006292456.1 CDS Q7C_597 NC_017856.1 655966 656997 R PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(655966..656997) Methylophaga frappieri 12844925 YP_006292457.1 CDS Q7C_598 NC_017856.1 657007 657510 R PFAM: Rare lipoprotein B family; LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) complement(657007..657510) Methylophaga frappieri 12844926 YP_006292458.1 CDS Q7C_599 NC_017856.1 657528 659981 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase complement(657528..659981) Methylophaga frappieri 12844927 YP_006292459.1 CDS Q7C_600 NC_017856.1 660104 660490 R PFAM: H-NS histone family; DNA-binding protein H-NS complement(660104..660490) Methylophaga frappieri 12844928 YP_006292460.1 CDS Q7C_601 NC_017856.1 660557 660805 R 4Fe-4S ferredoxin complement(660557..660805) Methylophaga frappieri 12844929 YP_006292461.1 CDS Q7C_602 NC_017856.1 660849 661340 R PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; Phosphopantetheine adenylyltransferase complement(660849..661340) Methylophaga frappieri 12844930 YP_006292462.1 CDS Q7C_603 NC_017856.1 661446 662267 R PFAM: Putative esterase; hydrolase of alpha/beta superfamily complement(661446..662267) Methylophaga frappieri 12844931 YP_006292463.1 CDS Q7C_604 NC_017856.1 662503 663084 R PFAM: hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; Ribosomal RNA small subunit methyltransferase D complement(662503..663084) Methylophaga frappieri 12844932 YP_006292464.1 CDS Q7C_605 NC_017856.1 663065 664372 R PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Zinc protease complement(663065..664372) Methylophaga frappieri 12844933 YP_006292465.1 CDS Q7C_606 NC_017856.1 664362 665729 R PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase complement(664362..665729) Methylophaga frappieri 12844934 YP_006292466.1 CDS Q7C_607 NC_017856.1 665721 666842 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; Signal recognition particle receptor protein FtsY (alpha subunit) 665721..666842 Methylophaga frappieri 12844935 YP_006292467.1 CDS Q7C_608 NC_017856.1 666839 667495 D PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; TC 3.A.5.1.1; cell division transporter ATP-binding protein FtsE 666839..667495 Methylophaga frappieri 12844936 YP_006292468.1 CDS Q7C_609 NC_017856.1 667495 668424 D PFAM: Predicted permease; cell division protein FtsX 667495..668424 Methylophaga frappieri 12844937 YP_006292469.1 CDS Q7C_610 NC_017856.1 668530 669393 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; RNA polymerase sigma factor RpoH 668530..669393 Methylophaga frappieri 12844938 YP_006292470.1 CDS Q7C_611 NC_017856.1 669459 669782 R PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain; 4Fe-4S ferredoxin complement(669459..669782) Methylophaga frappieri 12844939 YP_006292471.1 CDS Q7C_612 NC_017856.1 669924 670220 D PFAM: Protein of unknown function (DUF1049); integral membrane protein 669924..670220 Methylophaga frappieri 12844940 YP_006292472.1 CDS Q7C_613 NC_017856.1 670224 671411 D Heat shock protein YciM 670224..671411 Methylophaga frappieri 12844941 YP_006292473.1 CDS Q7C_614 NC_017856.1 671408 671758 D PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); Arsenate reductase 671408..671758 Methylophaga frappieri 12844942 YP_006292474.1 CDS Q7C_615 NC_017856.1 671758 672348 D PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; flavoprotein WrbA 671758..672348 Methylophaga frappieri 12844943 YP_006292475.1 CDS Q7C_616 NC_017856.1 672345 672719 D PFAM: Predicted membrane protein (DUF2069); hypothetical protein 672345..672719 Methylophaga frappieri 12844944 YP_006292476.1 CDS Q7C_617 NC_017856.1 672756 672980 D hypothetical protein 672756..672980 Methylophaga frappieri 12844945 YP_006292477.1 CDS Q7C_618 NC_017856.1 673059 673856 D PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--protein ligase 673059..673856 Methylophaga frappieri 12844946 YP_006292478.1 CDS Q7C_619 NC_017856.1 673853 674626 D PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Pantothenate kinase type III, CoaX-like protein 673853..674626 Methylophaga frappieri 12844947 YP_006292479.1 CDS Q7C_621 NC_017856.1 675052 675651 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; periplasmic protein TrxB 675052..675651 Methylophaga frappieri 12844949 YP_006292480.1 CDS Q7C_622 NC_017856.1 675703 679071 R PFAM: EAL domain; GGDEF domain; CHASE domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(675703..679071) Methylophaga frappieri 12844950 YP_006292481.1 CDS Q7C_623 NC_017856.1 679392 681104 D PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 679392..681104 Methylophaga frappieri 12844951 YP_006292482.1 CDS Q7C_624 NC_017856.1 681117 681425 D PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein 681117..681425 Methylophaga frappieri 12844952 YP_006292483.1 CDS Q7C_625 NC_017856.1 681429 682028 D PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; Recombination protein RecR 681429..682028 Methylophaga frappieri 12844953 YP_006292484.1 CDS Q7C_626 NC_017856.1 682055 683239 D PFAM: HDOD domain; signal transduction protein 682055..683239 Methylophaga frappieri 12844954 YP_006292485.1 CDS Q7C_627 NC_017856.1 683242 683955 D PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 683242..683955 Methylophaga frappieri 12844955 YP_006292486.1 CDS Q7C_628 NC_017856.1 684198 684665 D PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase 684198..684665 Methylophaga frappieri 12844956 YP_006292487.1 CDS Q7C_629 NC_017856.1 684713 684931 D PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 684713..684931 Methylophaga frappieri 12844957 YP_006292488.1 CDS Q7C_630 NC_017856.1 684928 685302 R PFAM: Disulfide bond formation protein DsbB; Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation complement(684928..685302) Methylophaga frappieri 12844958 YP_006292489.1 CDS Q7C_631 NC_017856.1 685505 686026 D PFAM: Protein of unknown function (DUF1451); hypothetical protein 685505..686026 Methylophaga frappieri 12844959 YP_006292490.1 CDS Q7C_632 NC_017856.1 686011 687186 R PFAM: Cupin superfamily protein; hypothetical protein complement(686011..687186) Methylophaga frappieri 12844960 YP_006292491.1 CDS Q7C_633 NC_017856.1 687189 687629 R PFAM: NfeD-like; activity regulator of membrane protease YbbK complement(687189..687629) Methylophaga frappieri 12844961 YP_006292492.1 CDS Q7C_634 NC_017856.1 687616 688554 R PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit YbbK complement(687616..688554) Methylophaga frappieri 12844962 YP_006292493.1 CDS Q7C_635 NC_017856.1 688683 689276 D PFAM: Protein of unknown function (DUF2803); hypothetical protein 688683..689276 Methylophaga frappieri 12844963 YP_006292494.1 CDS Q7C_636 NC_017856.1 689273 690007 R PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase complement(689273..690007) Methylophaga frappieri 12844964 YP_006292495.1 CDS Q7C_637 NC_017856.1 690004 690549 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase complement(690004..690549) Methylophaga frappieri 12844965 YP_006292496.1 CDS Q7C_638 NC_017856.1 690580 691506 D PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF 690580..691506 Methylophaga frappieri 12844966 YP_006292497.1 CDS Q7C_639 NC_017856.1 691496 692275 D PFAM: ABC transporter; TC 3.A.1.14.3; Ferrichrome transport ATP-binding protein FhuC 691496..692275 Methylophaga frappieri 12844967 YP_006292498.1 CDS Q7C_640 NC_017856.1 692272 693252 D PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 692272..693252 Methylophaga frappieri 12844968 YP_006292499.1 CDS Q7C_641 NC_017856.1 693323 694315 D PFAM: Rhodanese-like domain; hypothetical protein 693323..694315 Methylophaga frappieri 12844969 YP_006292500.1 CDS Q7C_642 NC_017856.1 694322 695983 D PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 694322..695983 Methylophaga frappieri 12844970 YP_006292501.1 CDS Q7C_643 NC_017856.1 695980 696444 R hypothetical protein complement(695980..696444) Methylophaga frappieri 12844971 YP_006292502.1 CDS Q7C_644 NC_017856.1 696480 697244 D PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 696480..697244 Methylophaga frappieri 12844972 YP_006292503.1 CDS Q7C_645 NC_017856.1 697357 698268 D PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 697357..698268 Methylophaga frappieri 12844973 YP_006292504.1 CDS Q7C_646 NC_017856.1 698268 699230 D PFAM: Protein of unknown function DUF58; hypothetical protein 698268..699230 Methylophaga frappieri 12844974 YP_006292505.1 CDS Q7C_647 NC_017856.1 699220 701247 D PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase 699220..701247 Methylophaga frappieri 12844975 YP_006292506.1 CDS Q7C_648 NC_017856.1 701312 702064 D PFAM: ThiF family; HesA/MoeB/ThiF family protein 701312..702064 Methylophaga frappieri 12844976 YP_006292507.1 CDS Q7C_649 NC_017856.1 702102 702563 D hypothetical protein 702102..702563 Methylophaga frappieri 12844977 YP_006292508.1 CDS Q7C_650 NC_017856.1 702605 703096 D PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 702605..703096 Methylophaga frappieri 12844978 YP_006292509.1 CDS Q7C_651 NC_017856.1 703296 704165 D hypothetical protein 703296..704165 Methylophaga frappieri 12844979 YP_006292510.1 CDS Q7C_652 NC_017856.1 704167 706449 R PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel complement(704167..706449) Methylophaga frappieri 12844980 YP_006292511.1 CDS Q7C_653 NC_017856.1 706684 707325 D hypothetical protein 706684..707325 Methylophaga frappieri 12844981 YP_006292512.1 CDS Q7C_654 NC_017856.1 707422 707904 D hypothetical protein 707422..707904 Methylophaga frappieri 12844982 YP_006292513.1 CDS Q7C_655 NC_017856.1 707983 709188 D PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 707983..709188 Methylophaga frappieri 12844983 YP_006292514.1 CDS Q7C_656 NC_017856.1 709202 710245 R PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein ACR3 complement(709202..710245) Methylophaga frappieri 12844984 YP_006292515.1 CDS Q7C_657 NC_017856.1 710245 710607 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; Arsenate reductase complement(710245..710607) Methylophaga frappieri 12844985 YP_006292516.1 CDS Q7C_658 NC_017856.1 710689 711057 R Arsenical resistance operon repressor complement(710689..711057) Methylophaga frappieri 12844986 YP_006292517.1 CDS Q7C_659 NC_017856.1 711165 711803 D PFAM: NmrA-like family; nucleoside-diphosphate sugar epimerase 711165..711803 Methylophaga frappieri 12844987 YP_006292518.1 CDS Q7C_660 NC_017856.1 711913 713232 D PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; Paraquat-inducible protein A 711913..713232 Methylophaga frappieri 12844988 YP_006292519.1 CDS Q7C_661 NC_017856.1 713225 714913 D PFAM: mce related protein; Paraquat-inducible protein B 713225..714913 Methylophaga frappieri 12844989 YP_006292520.1 CDS Q7C_662 NC_017856.1 714910 715482 D PFAM: Protein of unknown function (DUF330); lipoprotein 714910..715482 Methylophaga frappieri 12844990 YP_006292521.1 CDS Q7C_663 NC_017856.1 715611 716198 R hypothetical protein complement(715611..716198) Methylophaga frappieri 12844991 YP_006292522.1 CDS Q7C_664 NC_017856.1 716372 717733 R PFAM: Aldehyde dehydrogenase family; Succinate-semialdehyde dehydrogenase (NAD), Succinate-semialdehyde dehydrogenase (NADP+) complement(716372..717733) Methylophaga frappieri 12844992 YP_006292523.1 CDS Q7C_665 NC_017856.1 717741 718997 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro dipeptidase complement(717741..718997) Methylophaga frappieri 12844993 YP_006292524.1 CDS Q7C_666 NC_017856.1 718994 720271 R PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-pyruvate aminotransferase complement(718994..720271) Methylophaga frappieri 12844994 YP_006292525.1 CDS Q7C_667 NC_017856.1 720306 721475 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; N-acetyl-L,L-diaminopimelate deacetylase complement(720306..721475) Methylophaga frappieri 12844995 YP_006292526.1 CDS Q7C_668 NC_017856.1 721632 722378 R PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; ferredoxin--NADP(+) reductase complement(721632..722378) Methylophaga frappieri 12844996 YP_006292527.1 CDS Q7C_669 NC_017856.1 722542 723183 D hypothetical protein 722542..723183 Methylophaga frappieri 12844997 YP_006292528.1 CDS Q7C_670 NC_017856.1 723183 723548 D PFAM: Domain of unknown function DUF; hypothetical protein 723183..723548 Methylophaga frappieri 12844998 YP_006292529.1 CDS Q7C_671 NC_017856.1 723564 723896 D PFAM: Small Multidrug Resistance protein; Ethidium bromide-methyl viologen resistance protein EmrE 723564..723896 Methylophaga frappieri 12844999 YP_006292530.1 CDS Q7C_672 NC_017856.1 723978 726191 D PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein 723978..726191 Methylophaga frappieri 12845000 YP_006292531.1 CDS Q7C_673 NC_017856.1 726231 727352 D PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance; heat shock protein 726231..727352 Methylophaga frappieri 12845001 YP_006292532.1 CDS Q7C_674 NC_017856.1 727352 727594 D hypothetical protein 727352..727594 Methylophaga frappieri 12845002 YP_006292533.1 CDS Q7C_675 NC_017856.1 727575 728513 R PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Riboflavin kinase / FMN adenylyltransferase complement(727575..728513) Methylophaga frappieri 12845003 YP_006292534.1 CDS Q7C_676 NC_017856.1 728633 728878 D PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit 728633..728878 Methylophaga frappieri 12845004 YP_006292535.1 CDS Q7C_677 NC_017856.1 728905 729765 D PFAM: Polyprenyl synthetase; polyprenyl synthetase 728905..729765 Methylophaga frappieri 12845005 YP_006292536.1 CDS Q7C_678 NC_017856.1 729771 731603 D PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 729771..731603 Methylophaga frappieri 12845006 YP_006292537.1 CDS Q7C_679 NC_017856.1 731650 732030 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD 731650..732030 Methylophaga frappieri 12845007 YP_006292538.1 CDS Q7C_680 NC_017856.1 732038 732844 D PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; GTP cyclohydrolase I type 2 732038..732844 Methylophaga frappieri 12845008 YP_006292539.1 CDS Q7C_681 NC_017856.1 732914 733522 R PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease complement(732914..733522) Methylophaga frappieri 12845009 YP_006292540.1 CDS Q7C_682 NC_017856.1 733597 734718 D PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobA 733597..734718 Methylophaga frappieri 12845010 YP_006292541.1 CDS Q7C_683 NC_017856.1 734711 735967 D PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; Molybdopterin biosynthesis protein MoeA 734711..735967 Methylophaga frappieri 12845011 YP_006292542.1 CDS Q7C_684 NC_017856.1 735967 736830 D PFAM: PP-loop family; tRNA(Cytosine32)-2-thiocytidine synthetase 735967..736830 Methylophaga frappieri 12845012 YP_006292543.1 CDS Q7C_685 NC_017856.1 737108 737494 R dioxygenase of extradiol dioxygenase family complement(737108..737494) Methylophaga frappieri 12845013 YP_006292544.1 CDS Q7C_686 NC_017856.1 737548 738390 R PFAM: EamA-like transporter family; permease complement(737548..738390) Methylophaga frappieri 12845014 YP_006292545.1 CDS Q7C_687 NC_017856.1 738509 739705 D PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase; N-succinyl-L,L-diaminopimelate aminotransferase alternative 738509..739705 Methylophaga frappieri 12845015 YP_006292546.1 CDS Q7C_688 NC_017856.1 739721 740542 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 739721..740542 Methylophaga frappieri 12845016 YP_006292547.1 CDS Q7C_689 NC_017856.1 740641 740985 D PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; glutathione-dependent thiol reductase 740641..740985 Methylophaga frappieri 12845017 YP_006292548.1 CDS Q7C_690 NC_017856.1 740975 742114 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; N-succinyl-L,L-diaminopimelate desuccinylase 740975..742114 Methylophaga frappieri 12845018 YP_006292549.1 CDS Q7C_691 NC_017856.1 742119 742415 D hypothetical protein 742119..742415 Methylophaga frappieri 12845019 YP_006292550.1 CDS Q7C_692 NC_017856.1 742494 744719 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 742494..744719 Methylophaga frappieri 12845020 YP_006292551.1 CDS Q7C_693 NC_017856.1 744973 745179 D hypothetical protein 744973..745179 Methylophaga frappieri 12845021 YP_006292552.1 CDS Q7C_694 NC_017856.1 745176 745946 R PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(745176..745946) Methylophaga frappieri 12845022 YP_006292553.1 CDS Q7C_695 NC_017856.1 745964 746821 R PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; Formyltetrahydrofolate deformylase complement(745964..746821) Methylophaga frappieri 12845023 YP_006292554.1 CDS Q7C_696 NC_017856.1 746872 747222 R PFAM: MazG nucleotide pyrophosphohydrolase domain; pyrophosphatase complement(746872..747222) Methylophaga frappieri 12845024 YP_006292555.1 CDS Q7C_697 NC_017856.1 747215 747982 R esterase/lipase ybfF complement(747215..747982) Methylophaga frappieri 12845025 YP_006292556.1 CDS Q7C_698 NC_017856.1 748034 748210 D hypothetical protein 748034..748210 Methylophaga frappieri 12845026 YP_006292557.1 CDS Q7C_699 NC_017856.1 748240 749460 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase complement(748240..749460) Methylophaga frappieri 12845027 YP_006292558.1 CDS Q7C_700 NC_017856.1 749463 749978 R PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA; 3-hydroxydecanoyl-ACP dehydratase complement(749463..749978) Methylophaga frappieri 12845028 YP_006292559.1 CDS Q7C_701 NC_017856.1 750124 751443 R PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(750124..751443) Methylophaga frappieri 12845029 YP_006292560.1 CDS Q7C_702 NC_017856.1 751582 752244 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; regulatory protein LuxR complement(751582..752244) Methylophaga frappieri 12845030 YP_006292561.1 CDS Q7C_703 NC_017856.1 752248 753288 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein complement(752248..753288) Methylophaga frappieri 12845031 YP_006292562.1 CDS Q7C_704 NC_017856.1 753584 755764 R PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family; ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing complement(753584..755764) Methylophaga frappieri 12845032 YP_006292563.1 CDS Q7C_705 NC_017856.1 755757 755870 R hypothetical protein complement(755757..755870) Methylophaga frappieri 12845033 YP_006292564.1 CDS Q7C_706 NC_017856.1 755894 756232 D hypothetical protein 755894..756232 Methylophaga frappieri 12845034 YP_006292565.1 CDS Q7C_707 NC_017856.1 756234 757643 R PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; GTP-binding protein EngA complement(756234..757643) Methylophaga frappieri 12845035 YP_006292566.1 CDS Q7C_708 NC_017856.1 757644 758810 R TIGRFAM: outer membrane assembly lipoprotein YfgL; Outer membrane protein YfgL complement(757644..758810) Methylophaga frappieri 12845036 YP_006292567.1 CDS Q7C_709 NC_017856.1 758807 759442 R PFAM: Uncharacterized protein conserved in bacteria (DUF2133); hypothetical protein complement(758807..759442) Methylophaga frappieri 12845037 YP_006292568.1 CDS Q7C_710 NC_017856.1 759716 760900 D PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; Ammonium transporter 759716..760900 Methylophaga frappieri 12845038 YP_006292569.1 CDS Q7C_711 NC_017856.1 760944 761714 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(760944..761714) Methylophaga frappieri 12845039 YP_006292570.1 CDS Q7C_712 NC_017856.1 761711 762160 R PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; (3R)-hydroxymyristoyl-ACP dehydratase complement(761711..762160) Methylophaga frappieri 12845040 YP_006292571.1 CDS Q7C_713 NC_017856.1 762252 763268 R PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(762252..763268) Methylophaga frappieri 12845041 YP_006292572.1 CDS Q7C_714 NC_017856.1 763275 763760 R PFAM: Outer membrane protein (OmpH-like); periplasmic chaperone for outer membrane proteins Skp complement(763275..763760) Methylophaga frappieri 12845042 YP_006292573.1 CDS Q7C_715 NC_017856.1 763807 766083 R PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; Outer membrane protein assembly factor YaeT precursor complement(763807..766083) Methylophaga frappieri 12845043 YP_006292574.1 CDS Q7C_716 NC_017856.1 766139 767476 R PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; Membrane-associated zinc metalloprotease complement(766139..767476) Methylophaga frappieri 12845044 YP_006292575.1 CDS Q7C_717 NC_017856.1 767476 768651 R PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(767476..768651) Methylophaga frappieri 12845045 YP_006292576.1 CDS Q7C_718 NC_017856.1 768651 769478 R PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase complement(768651..769478) Methylophaga frappieri 12845046 YP_006292577.1 CDS Q7C_719 NC_017856.1 769471 770214 R PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl pyrophosphate synthetase complement(769471..770214) Methylophaga frappieri 12845047 YP_006292578.1 CDS Q7C_720 NC_017856.1 770237 770794 R PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; Ribosome recycling factor complement(770237..770794) Methylophaga frappieri 12845048 YP_006292579.1 CDS Q7C_721 NC_017856.1 770804 771529 R PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase complement(770804..771529) Methylophaga frappieri 12845049 YP_006292580.1 CDS Q7C_722 NC_017856.1 771533 772411 R PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts complement(771533..772411) Methylophaga frappieri 12845050 YP_006292581.1 CDS Q7C_723 NC_017856.1 772511 773263 R PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 complement(772511..773263) Methylophaga frappieri 12845051 YP_006292582.1 CDS Q7C_724 NC_017856.1 773538 774302 D PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; Methionine aminopeptidase 773538..774302 Methylophaga frappieri 12845052 YP_006292583.1 CDS Q7C_725 NC_017856.1 774319 776955 D PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; (Protein-PII) uridylyltransferase 774319..776955 Methylophaga frappieri 12845053 YP_006292584.1 CDS Q7C_726 NC_017856.1 777011 777277 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; competence protein complement(777011..777277) Methylophaga frappieri 12845054 YP_006292585.1 CDS Q7C_727 NC_017856.1 777422 777985 R PFAM: Bacterial sugar transferase; Lipid carrier : UDP-N-acetylgalactosaminyltransferase complement(777422..777985) Methylophaga frappieri 12845055 YP_006292586.1 CDS Q7C_728 NC_017856.1 777992 778957 R PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase complement(777992..778957) Methylophaga frappieri 12845056 YP_006292587.1 CDS Q7C_729 NC_017856.1 778954 780348 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(778954..780348) Methylophaga frappieri 12845057 YP_006292588.1 CDS Q7C_730 NC_017856.1 780314 780514 D hypothetical protein 780314..780514 Methylophaga frappieri 12845058 YP_006292589.1 CDS Q7C_731 NC_017856.1 780526 781311 R PFAM: Glycosyl transferase family 2; N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase complement(780526..781311) Methylophaga frappieri 12845059 YP_006292590.1 CDS Q7C_732 NC_017856.1 781329 782183 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(781329..782183) Methylophaga frappieri 12845060 YP_006292591.1 CDS Q7C_733 NC_017856.1 782606 783385 R PFAM: NAD dependent epimerase/dehydratase family; NAD dependent epimerase/dehydratase family protein complement(782606..783385) Methylophaga frappieri 12845061 YP_006292592.1 CDS Q7C_734 NC_017856.1 783382 784440 R PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase); 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) complement(783382..784440) Methylophaga frappieri 12845062 YP_006292593.1 CDS Q7C_735 NC_017856.1 784496 785215 R glycosyltransferase complement(784496..785215) Methylophaga frappieri 12845063 YP_006292594.1 CDS Q7C_736 NC_017856.1 785212 785499 R PFAM: Glycosyl transferase family 2; glycosyltransferase complement(785212..785499) Methylophaga frappieri 12845064 YP_006292595.1 CDS Q7C_737 NC_017856.1 785499 786992 R PFAM: Polysaccharide biosynthesis protein; capsular polysaccharide repeat unit transporter complement(785499..786992) Methylophaga frappieri 12845065 YP_006292596.1 CDS Q7C_738 NC_017856.1 786955 787344 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(786955..787344) Methylophaga frappieri 12845066 YP_006292597.1 CDS Q7C_739 NC_017856.1 787401 788045 R PFAM: WbqC-like protein family; WbqC-like protein complement(787401..788045) Methylophaga frappieri 12845067 YP_006292598.1 CDS Q7C_740 NC_017856.1 788105 789439 R PFAM: Polysaccharide pyruvyl transferase; hypothetical protein complement(788105..789439) Methylophaga frappieri 12845068 YP_006292599.1 CDS Q7C_741 NC_017856.1 789426 790520 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase complement(789426..790520) Methylophaga frappieri 12845069 YP_006292600.1 CDS Q7C_742 NC_017856.1 790591 790974 R PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family; MarR family transcriptional regulator complement(790591..790974) Methylophaga frappieri 12845070 YP_006292601.1 CDS Q7C_743 NC_017856.1 791285 792451 R PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; UDP-glucose dehydrogenase complement(791285..792451) Methylophaga frappieri 12845071 YP_006292602.1 CDS Q7C_744 NC_017856.1 792503 794404 R PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase complement(792503..794404) Methylophaga frappieri 12843082 YP_006292603.1 CDS Q7C_745 NC_017856.1 794439 796394 R PFAM: Polysaccharide biosynthesis protein; UDP-N-acetylglucosamine 4,6-dehydratase complement(794439..796394) Methylophaga frappieri 12843083 YP_006292604.1 CDS Q7C_746 NC_017856.1 796468 797328 R PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(796468..797328) Methylophaga frappieri 12843084 YP_006292605.1 CDS Q7C_747 NC_017856.1 797329 797874 R PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(797329..797874) Methylophaga frappieri 12843085 YP_006292606.1 CDS Q7C_748 NC_017856.1 797874 798758 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase complement(797874..798758) Methylophaga frappieri 12843086 YP_006292607.1 CDS Q7C_749 NC_017856.1 798755 799828 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(798755..799828) Methylophaga frappieri 12843087 YP_006292608.1 CDS Q7C_750 NC_017856.1 799833 799967 D hypothetical protein 799833..799967 Methylophaga frappieri 12843088 YP_006292609.1 CDS Q7C_751 NC_017856.1 800100 801155 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Alcohol dehydrogenase 800100..801155 Methylophaga frappieri 12843089 YP_006292610.1 CDS Q7C_752 NC_017856.1 801176 802087 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator complement(801176..802087) Methylophaga frappieri 12843090 YP_006292611.1 CDS Q7C_753 NC_017856.1 802165 803373 D PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 802165..803373 Methylophaga frappieri 12843091 YP_006292612.1 CDS Q7C_754 NC_017856.1 803452 804621 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 803452..804621 Methylophaga frappieri 12843092 YP_006292613.1 CDS Q7C_755 NC_017856.1 804634 807804 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 804634..807804 Methylophaga frappieri 12843093 YP_006292614.1 CDS Q7C_756 NC_017856.1 807805 809229 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; outer membrane protein OprN 807805..809229 Methylophaga frappieri 12843094 YP_006292615.1 CDS Q7C_757 NC_017856.1 809424 810359 D PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 809424..810359 Methylophaga frappieri 12843095 YP_006292616.1 CDS Q7C_758 NC_017856.1 810328 811464 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; metal chaperone complement(810328..811464) Methylophaga frappieri 12843096 YP_006292617.1 CDS Q7C_759 NC_017856.1 811568 813226 R PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; Formylmethanofuran dehydrogenase subunit A complement(811568..813226) Methylophaga frappieri 12843097 YP_006292618.1 CDS Q7C_760 NC_017856.1 813344 813802 R PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR complement(813344..813802) Methylophaga frappieri 12843098 YP_006292619.1 CDS Q7C_761 NC_017856.1 813922 814374 D PFAM: Fe-S metabolism associated domain; Sulfur acceptor protein SufE for iron-sulfur cluster assembly 813922..814374 Methylophaga frappieri 12843099 YP_006292620.1 CDS Q7C_762 NC_017856.1 814371 815495 D thioredoxin reductase 814371..815495 Methylophaga frappieri 12843100 YP_006292621.1 CDS Q7C_763 NC_017856.1 815489 816487 D PFAM: Sodium Bile acid symporter family; cysteinyl-tRNA synthetase 815489..816487 Methylophaga frappieri 12843101 YP_006292622.1 CDS Q7C_764 NC_017856.1 816611 818626 D PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Threonyl-tRNA synthetase 816611..818626 Methylophaga frappieri 12843102 YP_006292623.1 CDS Q7C_765 NC_017856.1 818619 819971 D PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; Dihydroorotase 818619..819971 Methylophaga frappieri 12843103 YP_006292624.1 CDS Q7C_766 NC_017856.1 819990 820478 D PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 819990..820478 Methylophaga frappieri 12843104 YP_006292625.1 CDS Q7C_767 NC_017856.1 820481 823540 R PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; lactate dehydrogenase-like protein complement(820481..823540) Methylophaga frappieri 12843105 YP_006292626.1 CDS Q7C_768 NC_017856.1 823715 824926 R PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; metal chaperone complement(823715..824926) Methylophaga frappieri 12843106 YP_006292627.1 CDS Q7C_769 NC_017856.1 824916 825314 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein, DksA/TraR family complement(824916..825314) Methylophaga frappieri 12843107 YP_006292628.1 CDS Q7C_770 NC_017856.1 825873 827939 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(825873..827939) Methylophaga frappieri 12843108 YP_006292629.1 CDS Q7C_771 NC_017856.1 828264 829250 D PFAM: Flavin containing amine oxidoreductase; putative deoxyribodipyrimidine photolyase 828264..829250 Methylophaga frappieri 12843109 YP_006292630.1 CDS Q7C_772 NC_017856.1 829448 830863 D PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 829448..830863 Methylophaga frappieri 12843110 YP_006292631.1 CDS Q7C_775 NC_017856.1 831257 832114 D PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase 831257..832114 Methylophaga frappieri 12843113 YP_006292632.1 CDS Q7C_776 NC_017856.1 832184 833578 R PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(832184..833578) Methylophaga frappieri 12843114 YP_006292633.1 CDS Q7C_777 NC_017856.1 833578 835251 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase complement(833578..835251) Methylophaga frappieri 12843115 YP_006292634.1 CDS Q7C_778 NC_017856.1 835373 835993 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; Peptidyl-prolyl cis-trans isomerase ppiB 835373..835993 Methylophaga frappieri 12843116 YP_006292635.1 CDS Q7C_779 NC_017856.1 836036 836791 D TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 836036..836791 Methylophaga frappieri 12843117 YP_006292636.1 CDS Q7C_780 NC_017856.1 836775 837503 R PFAM: Disulfide bond isomerase protein N-terminus; Thiol:disulfide interchange protein DsbC complement(836775..837503) Methylophaga frappieri 12843118 YP_006292637.1 CDS Q7C_781 NC_017856.1 837512 837997 R PFAM: Protein of unknown function (DUF520); hypothetical protein complement(837512..837997) Methylophaga frappieri 12843119 YP_006292638.1 CDS Q7C_782 NC_017856.1 838047 838964 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; site-specific recombinase XerD complement(838047..838964) Methylophaga frappieri 12843120 YP_006292639.1 CDS Q7C_783 NC_017856.1 839039 839383 R PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 complement(839039..839383) Methylophaga frappieri 12843121 YP_006292640.1 CDS Q7C_784 NC_017856.1 839402 840145 R PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N1) -methyltransferase complement(839402..840145) Methylophaga frappieri 12843122 YP_006292641.1 CDS Q7C_785 NC_017856.1 840155 840676 R PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM complement(840155..840676) Methylophaga frappieri 12843123 YP_006292642.1 CDS Q7C_786 NC_017856.1 840701 840937 R PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 complement(840701..840937) Methylophaga frappieri 12843124 YP_006292643.1 CDS Q7C_787 NC_017856.1 841039 842409 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; TC 3.A.5.1.1; Signal recognition particle subunit Ffh SRP54 complement(841039..842409) Methylophaga frappieri 12843125 YP_006292644.1 CDS Q7C_788 NC_017856.1 842537 843340 D PFAM: Cytochrome C assembly protein; CcsA-like protein 842537..843340 Methylophaga frappieri 12843126 YP_006292645.1 CDS Q7C_789 NC_017856.1 843343 844638 D PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; Hemolysin 843343..844638 Methylophaga frappieri 12843127 YP_006292646.1 CDS Q7C_790 NC_017856.1 844641 846521 D hypothetical protein 844641..846521 Methylophaga frappieri 12843128 YP_006292647.1 CDS Q7C_791 NC_017856.1 846583 849069 D PFAM: AsmA family; A/G-specific adenine glycosylase 846583..849069 Methylophaga frappieri 12843129 YP_006292648.1 CDS Q7C_792 NC_017856.1 849117 850160 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 849117..850160 Methylophaga frappieri 12843130 YP_006292649.1 CDS Q7C_793 NC_017856.1 850157 850423 D PFAM: Bacterial Fe(2+) trafficking; hypothetical protein 850157..850423 Methylophaga frappieri 12843131 YP_006292650.1 CDS Q7C_794 NC_017856.1 850502 850699 D hypothetical protein 850502..850699 Methylophaga frappieri 12843132 YP_006292651.1 CDS Q7C_795 NC_017856.1 850739 850948 D PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein CspE 850739..850948 Methylophaga frappieri 12843133 YP_006292652.1 CDS Q7C_796 NC_017856.1 851080 851826 D hypothetical protein 851080..851826 Methylophaga frappieri 12843134 YP_006292653.1 CDS Q7C_797 NC_017856.1 851992 852660 D hypothetical protein 851992..852660 Methylophaga frappieri 12843135 YP_006292654.1 CDS Q7C_798 NC_017856.1 852727 854643 R PFAM: ABC transporter; ABC transporter ATP-binding protein complement(852727..854643) Methylophaga frappieri 12843136 YP_006292655.1 CDS Q7C_799 NC_017856.1 854643 856529 R PFAM: ABC transporter; glutathione-regulated potassium-efflux system ATP-binding protein complement(854643..856529) Methylophaga frappieri 12843137 YP_006292656.1 CDS Q7C_800 NC_017856.1 856573 857259 R PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase complement(856573..857259) Methylophaga frappieri 12843138 YP_006292657.1 CDS Q7C_801 NC_017856.1 857457 857852 D PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; Peptide methionine sulfoxide reductase MsrB 857457..857852 Methylophaga frappieri 12843139 YP_006292658.1 CDS Q7C_802 NC_017856.1 857839 858108 D PFAM: GIY-YIG catalytic domain; excinuclease ABC subunit C 857839..858108 Methylophaga frappieri 12843140 YP_006292659.1 CDS Q7C_803 NC_017856.1 858254 858583 R PFAM: Mor transcription activator family; Mor transcription activator-like protein complement(858254..858583) Methylophaga frappieri 12843141 YP_006292660.1 CDS Q7C_804 NC_017856.1 858624 859289 R hypothetical protein complement(858624..859289) Methylophaga frappieri 12843142 YP_006292661.1 CDS Q7C_805 NC_017856.1 859327 859929 R PFAM: Protein of unknown function (DUF1018); E16-like protein complement(859327..859929) Methylophaga frappieri 12843143 YP_006292662.1 CDS Q7C_806 NC_017856.1 859926 860618 R hypothetical protein complement(859926..860618) Methylophaga frappieri 12843144 YP_006292663.1 CDS Q7C_807 NC_017856.1 860803 860922 R hypothetical protein complement(860803..860922) Methylophaga frappieri 12843145 YP_006292664.1 CDS Q7C_808 NC_017856.1 860909 861610 R PFAM: Protein of unknown function (DUF2786); hypothetical protein complement(860909..861610) Methylophaga frappieri 12843146 YP_006292665.1 CDS Q7C_809 NC_017856.1 861613 861783 R hypothetical protein complement(861613..861783) Methylophaga frappieri 12843147 YP_006292666.1 CDS Q7C_810 NC_017856.1 861798 862433 R PFAM: Protein of unknown function (DUF3164); Zn-dependent peptidase, insulinase complement(861798..862433) Methylophaga frappieri 12843148 YP_006292667.1 CDS Q7C_811 NC_017856.1 862462 862722 R hypothetical protein complement(862462..862722) Methylophaga frappieri 12843149 YP_006292668.1 CDS Q7C_812 NC_017856.1 862733 863338 R hypothetical protein complement(862733..863338) Methylophaga frappieri 12843150 YP_006292669.1 CDS Q7C_813 NC_017856.1 863338 863529 R PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator complement(863338..863529) Methylophaga frappieri 12843151 YP_006292670.1 CDS Q7C_814 NC_017856.1 863532 864689 R PFAM: Molybdopterin guanine dinucleotide synthesis protein B; Eha complement(863532..864689) Methylophaga frappieri 12843152 YP_006292671.1 CDS Q7C_815 NC_017856.1 864689 866452 R PFAM: Integrase core domain; Phage transposase complement(864689..866452) Methylophaga frappieri 12843153 YP_006292672.1 CDS Q7C_816 NC_017856.1 866449 867354 R PFAM: Protein of unknown function (DUF3102); Phage protein complement(866449..867354) Methylophaga frappieri 12843154 YP_006292673.1 CDS Q7C_817 NC_017856.1 867366 867665 R PFAM: IclR helix-turn-helix domain; IclR family transcriptional regulator complement(867366..867665) Methylophaga frappieri 12843155 YP_006292674.1 CDS Q7C_818 NC_017856.1 867662 867871 R hypothetical protein complement(867662..867871) Methylophaga frappieri 12843156 YP_006292675.1 CDS Q7C_819 NC_017856.1 867909 868109 R TIGRFAM: phage-associated protein, BcepMu gp16 family; phage-like DNA-binding protein complement(867909..868109) Methylophaga frappieri 12843157 YP_006292676.1 CDS Q7C_820 NC_017856.1 868187 868681 D hypothetical protein 868187..868681 Methylophaga frappieri 12843158 YP_006292677.1 CDS Q7C_821 NC_017856.1 868694 869149 D hypothetical protein 868694..869149 Methylophaga frappieri 12843159 YP_006292678.1 CDS Q7C_822 NC_017856.1 869184 869615 D PFAM: Staphylococcal nuclease homologue; nuclease-like protein 869184..869615 Methylophaga frappieri 12843160 YP_006292679.1 CDS Q7C_823 NC_017856.1 869746 870078 D phage-like membrane protein 869746..870078 Methylophaga frappieri 12843161 YP_006292680.1 CDS Q7C_824 NC_017856.1 870081 870809 D PFAM: Transglycosylase SLT domain; transglycosylase 870081..870809 Methylophaga frappieri 12843162 YP_006292681.1 CDS Q7C_825 NC_017856.1 870800 871231 D hypothetical protein 870800..871231 Methylophaga frappieri 12843163 YP_006292682.1 CDS Q7C_826 NC_017856.1 871194 871340 D hypothetical protein 871194..871340 Methylophaga frappieri 12843164 YP_006292683.1 CDS Q7C_827 NC_017856.1 871337 871717 D phage-like exported protein 871337..871717 Methylophaga frappieri 12843165 YP_006292684.1 CDS Q7C_828 NC_017856.1 871816 872127 D hypothetical protein 871816..872127 Methylophaga frappieri 12843166 YP_006292685.1 CDS Q7C_829 NC_017856.1 872130 872663 D PFAM: Protein of unknown function (DUF3486); Phage terminase, small subunit 872130..872663 Methylophaga frappieri 12843167 YP_006292686.1 CDS Q7C_830 NC_017856.1 872663 874321 D Phage terminase, large subunit 872663..874321 Methylophaga frappieri 12843168 YP_006292687.1 CDS Q7C_831 NC_017856.1 874315 875943 D PFAM: Protein of unknown function (DUF935); Mu-like prophage protein gp29 874315..875943 Methylophaga frappieri 12843169 YP_006292688.1 CDS Q7C_832 NC_017856.1 875930 877171 D PFAM: Phage Mu protein F like protein; Phage (Mu-like) virion morphogenesis protein 875930..877171 Methylophaga frappieri 12843170 YP_006292689.1 CDS Q7C_833 NC_017856.1 877670 877822 R hypothetical protein complement(877670..877822) Methylophaga frappieri 12843171 YP_006292690.1 CDS Q7C_834 NC_017856.1 877882 878961 D PFAM: Mu-like prophage I protein; Mu-like prophage I protein 877882..878961 Methylophaga frappieri 12843172 YP_006292691.1 CDS Q7C_835 NC_017856.1 878986 879405 D orf34 878986..879405 Methylophaga frappieri 12843173 YP_006292692.1 CDS Q7C_836 NC_017856.1 879434 880336 D PFAM: Mu-like prophage major head subunit gpT; Phage major capsid protein 879434..880336 Methylophaga frappieri 12843174 YP_006292693.1 CDS Q7C_837 NC_017856.1 880421 880963 D hypothetical protein 880421..880963 Methylophaga frappieri 12843175 YP_006292694.1 CDS Q7C_838 NC_017856.1 880985 881488 D PFAM: Protein of unknown function (DUF1320); Mu-like prophage protein gp36 880985..881488 Methylophaga frappieri 12843176 YP_006292695.1 CDS Q7C_839 NC_017856.1 881488 881937 D hypothetical protein 881488..881937 Methylophaga frappieri 12843177 YP_006292696.1 CDS Q7C_840 NC_017856.1 881940 882119 D hypothetical protein 881940..882119 Methylophaga frappieri 12843178 YP_006292697.1 CDS Q7C_841 NC_017856.1 882131 882889 D hypothetical protein 882131..882889 Methylophaga frappieri 12843179 YP_006292698.1 CDS Q7C_842 NC_017856.1 882889 883389 D hypothetical protein 882889..883389 Methylophaga frappieri 12843180 YP_006292699.1 CDS Q7C_843 NC_017856.1 883658 883849 D PFAM: Mu-like prophage protein Com; Mu-like prophage protein Com 883658..883849 Methylophaga frappieri 12843181 YP_006292700.1 CDS Q7C_844 NC_017856.1 883815 884576 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); Methyl-directed repair DNA adenine methylase 883815..884576 Methylophaga frappieri 12843182 YP_006292701.1 CDS Q7C_845 NC_017856.1 884730 887510 D PFAM: Prophage tail length tape measure protein; Phage tail length tape-measure protein 1 884730..887510 Methylophaga frappieri 12843183 YP_006292702.1 CDS Q7C_846 NC_017856.1 887510 888721 D hypothetical protein 887510..888721 Methylophaga frappieri 12843184 YP_006292703.1 CDS Q7C_847 NC_017856.1 888718 889539 D PFAM: Phage hypothetical protein BR0599; TIGRFAM: phage hypothetical protein BR0599; hypothetical protein 888718..889539 Methylophaga frappieri 12843185 YP_006292704.1 CDS Q7C_848 NC_017856.1 889964 892861 D hypothetical protein 889964..892861 Methylophaga frappieri 12843186 YP_006292705.1 CDS Q7C_849 NC_017856.1 892858 893610 D hypothetical protein 892858..893610 Methylophaga frappieri 12843187 YP_006292706.1 CDS Q7C_850 NC_017856.1 893607 894317 D hypothetical protein 893607..894317 Methylophaga frappieri 12843188 YP_006292707.1 CDS Q7C_851 NC_017856.1 894645 896240 D PFAM: ABC transporter; ABC transporter ATP-binding protein uup 894645..896240 Methylophaga frappieri 12843189 YP_006292708.1 CDS Q7C_852 NC_017856.1 896314 896523 R PFAM: Protein of unknown function (DUF1458); Dodecin Flavin-binding protein complement(896314..896523) Methylophaga frappieri 12843190 YP_006292709.1 CDS Q7C_853 NC_017856.1 896793 898592 D PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; cold-shock DEAD-box protein A 896793..898592 Methylophaga frappieri 12843191 YP_006292710.1 CDS Q7C_854 NC_017856.1 898651 899880 D PFAM: Nucleoside recognition; Fused spore maturation proteins A and B 898651..899880 Methylophaga frappieri 12843192 YP_006292711.1 CDS Q7C_855 NC_017856.1 900007 900648 D PFAM: 2OG-Fe(II) oxygenase superfamily; SM-20-like protein 900007..900648 Methylophaga frappieri 12843193 YP_006292712.1 CDS Q7C_856 NC_017856.1 900649 901185 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; Peptide deformylase 900649..901185 Methylophaga frappieri 12843194 YP_006292713.1 CDS Q7C_857 NC_017856.1 901194 902252 R PFAM: Protein of unknown function (DUF3549); hypothetical protein complement(901194..902252) Methylophaga frappieri 12843195 YP_006292714.1 CDS Q7C_858 NC_017856.1 902261 903487 R PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase / N-acetylglutamate synthase complement(902261..903487) Methylophaga frappieri 12843196 YP_006292715.1 CDS Q7C_859 NC_017856.1 903487 906213 R PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; TC 3.A.5.1.1; protein export cytoplasm protein SecA ATPase RNA helicase complement(903487..906213) Methylophaga frappieri 12843197 YP_006292716.1 CDS Q7C_860 NC_017856.1 906348 907040 R PFAM: Peptidase family M23; peptidase, M23/M37 family protein complement(906348..907040) Methylophaga frappieri 12843198 YP_006292717.1 CDS Q7C_861 NC_017856.1 907283 907732 D PFAM: Protein of unknown function (DUF721); hypothetical protein 907283..907732 Methylophaga frappieri 12843199 YP_006292718.1 CDS Q7C_862 NC_017856.1 907729 908646 R PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase complement(907729..908646) Methylophaga frappieri 12843200 YP_006292719.1 CDS Q7C_863 NC_017856.1 908731 909894 R PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ complement(908731..909894) Methylophaga frappieri 12843201 YP_006292720.1 CDS Q7C_864 NC_017856.1 909925 911172 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; Cell division protein FtsA complement(909925..911172) Methylophaga frappieri 12843202 YP_006292721.1 CDS Q7C_865 NC_017856.1 911172 911948 R PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type; Cell division protein FtsQ complement(911172..911948) Methylophaga frappieri 12843203 YP_006292722.1 CDS Q7C_866 NC_017856.1 911948 912886 R PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(911948..912886) Methylophaga frappieri 12843204 YP_006292723.1 CDS Q7C_867 NC_017856.1 912883 913773 R PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(912883..913773) Methylophaga frappieri 12843205 YP_006292724.1 CDS Q7C_868 NC_017856.1 913773 915194 R PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(913773..915194) Methylophaga frappieri 12843206 YP_006292725.1 CDS Q7C_869 NC_017856.1 915187 916260 R PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase complement(915187..916260) Methylophaga frappieri 12843207 YP_006292726.1 CDS Q7C_870 NC_017856.1 916257 917315 R PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein FtsW complement(916257..917315) Methylophaga frappieri 12843208 YP_006292727.1 CDS Q7C_871 NC_017856.1 917383 918732 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(917383..918732) Methylophaga frappieri 12843209 YP_006292728.1 CDS Q7C_872 NC_017856.1 918729 919811 R PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(918729..919811) Methylophaga frappieri 12843210 YP_006292729.1 CDS Q7C_873 NC_017856.1 919811 921166 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(919811..921166) Methylophaga frappieri 12843211 YP_006292730.1 CDS Q7C_874 NC_017856.1 921163 922647 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(921163..922647) Methylophaga frappieri 12843212 YP_006292731.1 CDS Q7C_875 NC_017856.1 922644 924350 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; Cell division protein FtsI (Peptidoglycan synthetase) complement(922644..924350) Methylophaga frappieri 12843213 YP_006292732.1 CDS Q7C_876 NC_017856.1 924347 924640 R PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; cell division protein FtsL complement(924347..924640) Methylophaga frappieri 12843214 YP_006292733.1 CDS Q7C_877 NC_017856.1 924637 925575 R PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; rRNA small subunit methyltransferase H complement(924637..925575) Methylophaga frappieri 12843215 YP_006292734.1 CDS Q7C_878 NC_017856.1 925584 926036 R PFAM: MraZ protein; TIGRFAM: mraZ protein; cell division protein MraZ complement(925584..926036) Methylophaga frappieri 12843216 YP_006292735.1 CDS Q7C_879 NC_017856.1 926721 927569 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; rRNA small subunit methyltransferase I complement(926721..927569) Methylophaga frappieri 12843217 YP_006292736.1 CDS Q7C_880 NC_017856.1 927663 929501 D PFAM: LppC putative lipoprotein; LppC putative lipoprotein 927663..929501 Methylophaga frappieri 12843218 YP_006292737.1 CDS Q7C_881 NC_017856.1 929498 929869 D PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; hypothetical protein 929498..929869 Methylophaga frappieri 12843219 YP_006292738.1 CDS Q7C_882 NC_017856.1 929921 930496 D PFAM: Putative phospholipid-binding domain; hemolysin 929921..930496 Methylophaga frappieri 12843220 YP_006292739.1 CDS Q7C_883 NC_017856.1 930539 930964 R PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; hypothetical protein complement(930539..930964) Methylophaga frappieri 12843221 YP_006292740.1 CDS Q7C_884 NC_017856.1 931020 931415 D PFAM: PilZ domain; carbamoylphosphate synthase large subunit 931020..931415 Methylophaga frappieri 12843222 YP_006292741.1 CDS Q7C_885 NC_017856.1 931395 932783 R PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA complement(931395..932783) Methylophaga frappieri 12843223 YP_006292742.1 CDS Q7C_886 NC_017856.1 932776 933855 R PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase complement(932776..933855) Methylophaga frappieri 12843224 YP_006292743.1 CDS Q7C_887 NC_017856.1 933852 935264 R PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase complement(933852..935264) Methylophaga frappieri 12843225 YP_006292744.1 CDS Q7C_888 NC_017856.1 935357 935905 R PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 complement(935357..935905) Methylophaga frappieri 12843226 YP_006292745.1 CDS Q7C_889 NC_017856.1 935929 936861 R PFAM: Predicted membrane protein (DUF2232); hypothetical protein complement(935929..936861) Methylophaga frappieri 12843227 YP_006292746.1 CDS Q7C_890 NC_017856.1 936895 937122 R PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(936895..937122) Methylophaga frappieri 12843228 YP_006292747.1 CDS Q7C_891 NC_017856.1 937149 937496 R PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(937149..937496) Methylophaga frappieri 12843229 YP_006292748.1 CDS Q7C_892 NC_017856.1 937610 938335 R PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB complement(937610..938335) Methylophaga frappieri 12843230 YP_006292749.1 CDS Q7C_893 NC_017856.1 938376 939050 R PFAM: Rickettsia 17 kDa surface antigen; OmpA family; Outer membrane protein A precursor complement(938376..939050) Methylophaga frappieri 12843231 YP_006292750.1 CDS Q7C_894 NC_017856.1 939144 939665 D PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein MoaB 939144..939665 Methylophaga frappieri 12843232 YP_006292751.1 CDS Q7C_895 NC_017856.1 939662 939910 D PFAM: Glutaredoxin-like domain (DUF836); glutaredoxin-like protein 939662..939910 Methylophaga frappieri 12843233 YP_006292752.1 CDS Q7C_896 NC_017856.1 939963 940847 D alpha/beta hydrolase 939963..940847 Methylophaga frappieri 12843234 YP_006292753.1 CDS Q7C_897 NC_017856.1 940881 942032 D PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D; Ribonuclease D 940881..942032 Methylophaga frappieri 12843235 YP_006292754.1 CDS Q7C_898 NC_017856.1 942032 942916 D PFAM: pfkB family carbohydrate kinase; sugar kinase 942032..942916 Methylophaga frappieri 12843236 YP_006292755.1 CDS Q7C_899 NC_017856.1 942959 943366 R PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A complement(942959..943366) Methylophaga frappieri 12843237 YP_006292756.1 CDS Q7C_900 NC_017856.1 943431 944399 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; Thiamine-monophosphate kinase complement(943431..944399) Methylophaga frappieri 12843238 YP_006292757.1 CDS Q7C_901 NC_017856.1 944412 944870 R PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription termination protein NusB complement(944412..944870) Methylophaga frappieri 12843239 YP_006292758.1 CDS Q7C_902 NC_017856.1 944870 945352 R PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(944870..945352) Methylophaga frappieri 12843240 YP_006292759.1 CDS Q7C_903 NC_017856.1 945425 946291 R PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); bis(5'-nucleosyl)-tetraphosphatase complement(945425..946291) Methylophaga frappieri 12843241 YP_006292760.1 CDS Q7C_904 NC_017856.1 946486 946938 D PFAM: Protein of unknown function (DUF3465); hypothetical protein 946486..946938 Methylophaga frappieri 12843242 YP_006292761.1 CDS Q7C_905 NC_017856.1 947014 947448 D PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific uracil/thymine DNA-glycosylase 947014..947448 Methylophaga frappieri 12843243 YP_006292762.1 CDS Q7C_906 NC_017856.1 947572 949743 R PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; Catalase / Peroxidase complement(947572..949743) Methylophaga frappieri 12843244 YP_006292763.1 CDS Q7C_907 NC_017856.1 949860 950030 R hypothetical protein complement(949860..950030) Methylophaga frappieri 12843245 YP_006292764.1 CDS Q7C_908 NC_017856.1 950040 951473 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase complement(950040..951473) Methylophaga frappieri 12843246 YP_006292765.1 CDS Q7C_909 NC_017856.1 951475 952380 R PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase complement(951475..952380) Methylophaga frappieri 12843247 YP_006292766.1 CDS Q7C_910 NC_017856.1 952393 953091 R PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); Phosphoadenylyl-sulfate reductase/Adenylyl-sulfate reductase complement(952393..953091) Methylophaga frappieri 12843248 YP_006292767.1 CDS Q7C_911 NC_017856.1 953084 953314 R hypothetical protein complement(953084..953314) Methylophaga frappieri 12843249 YP_006292768.1 CDS Q7C_912 NC_017856.1 953302 954102 R PFAM: Sulfite exporter TauE/SafE; sulfate permease complement(953302..954102) Methylophaga frappieri 12843250 YP_006292769.1 CDS Q7C_913 NC_017856.1 954344 954586 D hypothetical protein 954344..954586 Methylophaga frappieri 12843251 YP_006292770.1 CDS Q7C_914 NC_017856.1 954649 955569 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Cys regulon transcriptional activator CysB 954649..955569 Methylophaga frappieri 12843252 YP_006292771.1 CDS Q7C_915 NC_017856.1 955661 956227 D PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD gene product 955661..956227 Methylophaga frappieri 12843253 YP_006292772.1 CDS Q7C_916 NC_017856.1 956400 957026 R hypothetical protein complement(956400..957026) Methylophaga frappieri 12843254 YP_006292773.1 CDS Q7C_917 NC_017856.1 957033 957653 D PFAM: Phage integrase family; phage integrase 957033..957653 Methylophaga frappieri 12843255 YP_006292774.1 CDS Q7C_918 NC_017856.1 957792 958175 D PFAM: Protein of unknown function (DUF1044); hypothetical protein 957792..958175 Methylophaga frappieri 12843256 YP_006292775.1 CDS Q7C_919 NC_017856.1 958159 958461 D DNA-binding protein 958159..958461 Methylophaga frappieri 12843257 YP_006292776.1 CDS Q7C_920 NC_017856.1 958484 959302 D PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: TIGR02391 family protein; hypothetical protein 958484..959302 Methylophaga frappieri 12843258 YP_006292777.1 CDS Q7C_921 NC_017856.1 959316 960599 D hypothetical protein 959316..960599 Methylophaga frappieri 12843259 YP_006292778.1 CDS Q7C_922 NC_017856.1 960677 961465 R hypothetical protein complement(960677..961465) Methylophaga frappieri 12843260 YP_006292779.1 CDS Q7C_923 NC_017856.1 961472 962374 R hypothetical protein complement(961472..962374) Methylophaga frappieri 12843261 YP_006292780.1 CDS Q7C_924 NC_017856.1 962448 963281 R hypothetical protein complement(962448..963281) Methylophaga frappieri 12843262 YP_006292781.1 CDS Q7C_925 NC_017856.1 963267 963656 D hypothetical protein 963267..963656 Methylophaga frappieri 12843263 YP_006292782.1 CDS Q7C_926 NC_017856.1 963653 965908 D PFAM: ThiF family; dinucleotide-utilizing protein 963653..965908 Methylophaga frappieri 12843264 YP_006292783.1 CDS Q7C_927 NC_017856.1 965954 967024 D hypothetical protein 965954..967024 Methylophaga frappieri 12843265 YP_006292784.1 CDS Q7C_928 NC_017856.1 967217 968233 D hypothetical protein 967217..968233 Methylophaga frappieri 12843266 YP_006292785.1 CDS Q7C_929 NC_017856.1 968635 969141 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 968635..969141 Methylophaga frappieri 12843267 YP_006292786.1 CDS Q7C_930 NC_017856.1 969410 969799 D FIG01198175; hypothetical protein 969410..969799 Methylophaga frappieri 12843268 YP_006292787.1 CDS Q7C_931 NC_017856.1 969805 970173 R hypothetical protein complement(969805..970173) Methylophaga frappieri 12843269 YP_006292788.1 CDS Q7C_932 NC_017856.1 970303 971010 R hypothetical protein complement(970303..971010) Methylophaga frappieri 12843270 YP_006292789.1 CDS Q7C_933 NC_017856.1 971095 971418 D PFAM: Domain of unknown function (DUF932); hypothetical protein 971095..971418 Methylophaga frappieri 12843271 YP_006292790.1 CDS Q7C_934 NC_017856.1 971493 973550 D PFAM: ParB-like nuclease domain; plasmid stabilization protein 971493..973550 Methylophaga frappieri 12843272 YP_006292791.1 CDS Q7C_935 NC_017856.1 973522 974436 D hypothetical protein 973522..974436 Methylophaga frappieri 12843273 YP_006292792.1 CDS Q7C_936 NC_017856.1 974600 974914 D PFAM: Protein of unknown function (DUF736); hypothetical protein 974600..974914 Methylophaga frappieri 12843274 YP_006292793.1 CDS Q7C_937 NC_017856.1 975236 975448 R Transcriptional regulator, PbsX family complement(975236..975448) Methylophaga frappieri 12843275 YP_006292794.1 CDS Q7C_938 NC_017856.1 975450 975566 R hypothetical protein complement(975450..975566) Methylophaga frappieri 12843276 YP_006292795.1 CDS Q7C_939 NC_017856.1 975794 976141 D PFAM: Protein of unknown function (DUF2958); lipoprotein 975794..976141 Methylophaga frappieri 12843277 YP_006292796.1 CDS Q7C_940 NC_017856.1 976251 976376 D hypothetical protein 976251..976376 Methylophaga frappieri 12843278 YP_006292797.1 CDS Q7C_941 NC_017856.1 976386 976511 R hypothetical protein complement(976386..976511) Methylophaga frappieri 12843279 YP_006292798.1 CDS Q7C_942 NC_017856.1 976488 977255 D PFAM: Uncharacterized conserved protein (DUF2285); hypothetical protein 976488..977255 Methylophaga frappieri 12843280 YP_006292799.1 CDS Q7C_943 NC_017856.1 977367 977651 D TIGRFAM: DNA binding domain, excisionase family; hypothetical protein 977367..977651 Methylophaga frappieri 12843281 YP_006292800.1 CDS Q7C_944 NC_017856.1 977678 978523 D PFAM: Replication initiator protein A; Plasmid replication initiator protein 977678..978523 Methylophaga frappieri 12843282 YP_006292801.1 CDS Q7C_945 NC_017856.1 978538 978768 D hypothetical protein 978538..978768 Methylophaga frappieri 12843283 YP_006292802.1 CDS Q7C_946 NC_017856.1 978765 979403 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome (plasmid) partitioning protein ParA 978765..979403 Methylophaga frappieri 12843284 YP_006292803.1 CDS Q7C_947 NC_017856.1 979400 979672 D hypothetical protein 979400..979672 Methylophaga frappieri 12843285 YP_006292804.1 CDS Q7C_948 NC_017856.1 979669 980202 D PFAM: Protein of unknown function (DUF2840); glycosidase 979669..980202 Methylophaga frappieri 12843286 YP_006292805.1 CDS Q7C_949 NC_017856.1 980199 980795 D PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF; type IV secretory pathway, protease TraF 980199..980795 Methylophaga frappieri 12843287 YP_006292806.1 CDS Q7C_950 NC_017856.1 980792 981235 D hypothetical protein 980792..981235 Methylophaga frappieri 12843288 YP_006292807.1 CDS Q7C_951 NC_017856.1 981186 981836 D hypothetical protein 981186..981836 Methylophaga frappieri 12843289 YP_006292808.1 CDS Q7C_952 NC_017856.1 981823 983217 D PFAM: Protein of unknown function (DUF3363); type IV secretory pathway, VirD2 components (relaxase) 981823..983217 Methylophaga frappieri 12843290 YP_006292809.1 CDS Q7C_953 NC_017856.1 983272 983421 R hypothetical protein complement(983272..983421) Methylophaga frappieri 12843291 YP_006292810.1 CDS Q7C_954 NC_017856.1 984109 984816 R PFAM: Transposase; transposase complement(984109..984816) Methylophaga frappieri 12843292 YP_006292811.1 CDS Q7C_955 NC_017856.1 984787 985614 D hypothetical protein 984787..985614 Methylophaga frappieri 12843293 YP_006292812.1 CDS Q7C_956 NC_017856.1 985628 986521 D PFAM: Phosphotransferase enzyme family; Macrolide 2'-phosphotransferase I 985628..986521 Methylophaga frappieri 12843294 YP_006292813.1 CDS Q7C_957 NC_017856.1 986521 987798 D PFAM: Major Facilitator Superfamily; Mrx 986521..987798 Methylophaga frappieri 12843295 YP_006292814.1 CDS Q7C_958 NC_017856.1 987808 988815 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator 987808..988815 Methylophaga frappieri 12843296 YP_006292815.1 CDS Q7C_959 NC_017856.1 988812 989075 D lipoprotein 988812..989075 Methylophaga frappieri 12843297 YP_006292816.1 CDS Q7C_960 NC_017856.1 989311 991326 D PFAM: TraG/TraD family; type IV secretion system protein VirD4 989311..991326 Methylophaga frappieri 12843298 YP_006292817.1 CDS Q7C_961 NC_017856.1 991323 991799 D PFAM: Ribbon-helix-helix protein, copG family; CopG domain-containing protein 991323..991799 Methylophaga frappieri 12843299 YP_006292818.1 CDS Q7C_962 NC_017856.1 991796 992863 D PFAM: Type II/IV secretion system protein; TIGRFAM: P-type conjugative transfer ATPase TrbB; Conjugative transfer protein TrbB 991796..992863 Methylophaga frappieri 12843300 YP_006292819.1 CDS Q7C_963 NC_017856.1 993243 993515 D PFAM: Type IV secretory pathway, VirB3-like protein; Conjugative transfer protein TrbD 993243..993515 Methylophaga frappieri 12843301 YP_006292820.1 CDS Q7C_964 NC_017856.1 993526 995958 D PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; Conjugative transfer protein TrbE 993526..995958 Methylophaga frappieri 12843302 YP_006292821.1 CDS Q7C_965 NC_017856.1 995955 996698 D TIGRFAM: P-type conjugative transfer protein TrbJ; Conjugative transfer protein TrbJ 995955..996698 Methylophaga frappieri 12843303 YP_006292822.1 CDS Q7C_966 NC_017856.1 996711 998090 D PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL; Conjugative transfer protein TrbL 996711..998090 Methylophaga frappieri 12843304 YP_006292823.1 CDS Q7C_967 NC_017856.1 998108 998812 D PFAM: VirB8 protein; Conjugative transfer protein TrbF 998108..998812 Methylophaga frappieri 12843305 YP_006292824.1 CDS Q7C_968 NC_017856.1 998809 999813 D PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; Conjugative transfer protein TrbG 998809..999813 Methylophaga frappieri 12843306 YP_006292825.1 CDS Q7C_969 NC_017856.1 999816 1001093 D PFAM: Bacterial conjugation TrbI-like protein; Conjugative transfer protein TrbI 999816..1001093 Methylophaga frappieri 12843307 YP_006292826.1 CDS Q7C_970 NC_017856.1 1001090 1001311 D PFAM: Protein of unknown function (DUF2274); hypothetical protein 1001090..1001311 Methylophaga frappieri 12843308 YP_006292827.1 CDS Q7C_971 NC_017856.1 1002165 1004231 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor 1002165..1004231 Methylophaga frappieri 12843309 YP_006292828.1 CDS Q7C_972 NC_017856.1 1004242 1004502 D PFAM: YKOF-related Family; Disaggregatase related; YKOF-like protein 1004242..1004502 Methylophaga frappieri 12843310 YP_006292829.1 CDS Q7C_973 NC_017856.1 1004502 1005122 D PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; thiamin transporter PnuT 1004502..1005122 Methylophaga frappieri 12843311 YP_006292830.1 CDS Q7C_974 NC_017856.1 1005122 1005781 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-deoxyglucose-6-phosphate hydrolase YniC 1005122..1005781 Methylophaga frappieri 12843312 YP_006292831.1 CDS Q7C_975 NC_017856.1 1005959 1006789 D PFAM: Protein of unknown function (DUF2971); hypothetical protein 1005959..1006789 Methylophaga frappieri 12843313 YP_006292832.1 CDS Q7C_976 NC_017856.1 1007291 1007413 D hypothetical protein 1007291..1007413 Methylophaga frappieri 12843314 YP_006292833.1 CDS Q7C_977 NC_017856.1 1008049 1008489 R hypothetical protein complement(1008049..1008489) Methylophaga frappieri 12843315 YP_006292834.1 CDS Q7C_978 NC_017856.1 1008776 1010884 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(1008776..1010884) Methylophaga frappieri 12843316 YP_006292835.1 CDS Q7C_979 NC_017856.1 1011098 1011463 D hypothetical protein 1011098..1011463 Methylophaga frappieri 12843317 YP_006292836.1 CDS Q7C_980 NC_017856.1 1011489 1011842 D PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 1011489..1011842 Methylophaga frappieri 12843318 YP_006292837.1 CDS Q7C_981 NC_017856.1 1011858 1012754 R hypothetical protein complement(1011858..1012754) Methylophaga frappieri 12843319 YP_006292838.1 CDS Q7C_982 NC_017856.1 1012748 1013422 R PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1012748..1013422) Methylophaga frappieri 12843320 YP_006292839.1 CDS Q7C_983 NC_017856.1 1013419 1014480 R PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; Methylthioribose-1-phosphate isomerase complement(1013419..1014480) Methylophaga frappieri 12843321 YP_006292840.1 CDS Q7C_984 NC_017856.1 1014518 1015837 D PFAM: Amidohydrolase family; S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase 1014518..1015837 Methylophaga frappieri 12843322 YP_006292841.1 CDS Q7C_985 NC_017856.1 1015834 1016538 D PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1015834..1016538 Methylophaga frappieri 12843323 YP_006292842.1 CDS Q7C_986 NC_017856.1 1016535 1017197 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase 1016535..1017197 Methylophaga frappieri 12843324 YP_006292843.1 CDS Q7C_987 NC_017856.1 1017185 1018474 D PFAM: RmuC family; DNA recombination protein RmuC 1017185..1018474 Methylophaga frappieri 12843325 YP_006292844.1 CDS Q7C_988 NC_017856.1 1018458 1019351 D PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; phytoene synthase 1018458..1019351 Methylophaga frappieri 12843326 YP_006292845.1 CDS Q7C_996 NC_017856.1 1027612 1028619 R AraC family transcriptional regulator complement(1027612..1028619) Methylophaga frappieri 12843333 YP_006292846.1 CDS Q7C_997 NC_017856.1 1028727 1029218 D hypothetical protein 1028727..1029218 Methylophaga frappieri 12843334 YP_006292847.1 CDS Q7C_998 NC_017856.1 1029270 1030466 R PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase cluster 1 complement(1029270..1030466) Methylophaga frappieri 12843335 YP_006292848.1 CDS Q7C_999 NC_017856.1 1030639 1032159 D PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23; Peptidase, M23/M37 family 1030639..1032159 Methylophaga frappieri 12843336 YP_006292849.1 CDS Q7C_1000 NC_017856.1 1032159 1033286 D PFAM: Uncharacterised protein family (UPF0075); anhydro-N-acetylmuramic acid kinase 1032159..1033286 Methylophaga frappieri 12843337 YP_006292850.1 CDS Q7C_1001 NC_017856.1 1033288 1034757 R PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(1033288..1034757) Methylophaga frappieri 12843338 YP_006292851.1 CDS Q7C_1002 NC_017856.1 1034760 1036442 R PFAM: Glycosyl hydrolase family 57; amylopullulanase complement(1034760..1036442) Methylophaga frappieri 12843339 YP_006292852.1 CDS Q7C_1003 NC_017856.1 1036432 1037700 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase complement(1036432..1037700) Methylophaga frappieri 12843340 YP_006292853.1 CDS Q7C_1004 NC_017856.1 1037798 1039981 D PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; 1,4-alpha-glucan branching protein 1037798..1039981 Methylophaga frappieri 12843341 YP_006292854.1 CDS Q7C_1005 NC_017856.1 1040023 1041660 R PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase complement(1040023..1041660) Methylophaga frappieri 12843342 YP_006292855.1 CDS Q7C_1006 NC_017856.1 1041665 1042945 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1041665..1042945) Methylophaga frappieri 12843343 YP_006292856.1 CDS Q7C_1007 NC_017856.1 1042948 1044075 R PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(1042948..1044075) Methylophaga frappieri 12843344 YP_006292857.1 CDS Q7C_1008 NC_017856.1 1044075 1045127 R hypothetical protein complement(1044075..1045127) Methylophaga frappieri 12843345 YP_006292858.1 CDS Q7C_1009 NC_017856.1 1045124 1045771 R PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW; tfp pilus assembly protein PilF complement(1045124..1045771) Methylophaga frappieri 12843346 YP_006292859.1 CDS Q7C_1010 NC_017856.1 1045882 1046727 R PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; ribosomal RNA large subunit methyltransferase N complement(1045882..1046727) Methylophaga frappieri 12843347 YP_006292860.1 CDS Q7C_1011 NC_017856.1 1046991 1047422 R PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase complement(1046991..1047422) Methylophaga frappieri 12843348 YP_006292861.1 CDS Q7C_1012 NC_017856.1 1047581 1048444 D PFAM: ATP-NAD kinase; NAD kinase 1047581..1048444 Methylophaga frappieri 12843349 YP_006292862.1 CDS Q7C_1013 NC_017856.1 1048438 1050114 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 1048438..1050114 Methylophaga frappieri 12843350 YP_006292863.1 CDS Q7C_1014 NC_017856.1 1050111 1050533 R PFAM: Ferric uptake regulator family; Ferric uptake regulation protein FUR complement(1050111..1050533) Methylophaga frappieri 12843351 YP_006292864.1 CDS Q7C_1015 NC_017856.1 1050611 1051192 D PFAM: SmpA / OmlA family; Outer membrane lipoprotein SmpA 1050611..1051192 Methylophaga frappieri 12843352 YP_006292865.1 CDS Q7C_1016 NC_017856.1 1051242 1051877 R PFAM: Carbonic anhydrase; carbonic anhydrase complement(1051242..1051877) Methylophaga frappieri 12843353 YP_006292866.1 CDS Q7C_1017 NC_017856.1 1051886 1052521 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(1051886..1052521) Methylophaga frappieri 12843354 YP_006292867.1 CDS Q7C_1018 NC_017856.1 1052581 1053822 R hypothetical protein complement(1052581..1053822) Methylophaga frappieri 12843355 YP_006292868.1 CDS Q7C_1019 NC_017856.1 1053921 1054325 R hypothetical protein complement(1053921..1054325) Methylophaga frappieri 12843356 YP_006292869.1 CDS Q7C_1020 NC_017856.1 1054470 1054769 D PFAM: PilZ domain; glycosyltransferase 1054470..1054769 Methylophaga frappieri 12843357 YP_006292870.1 CDS Q7C_1021 NC_017856.1 1054771 1055412 R PFAM: Ubiquinone biosynthesis protein COQ7; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(1054771..1055412) Methylophaga frappieri 12843358 YP_006292871.1 CDS Q7C_1022 NC_017856.1 1055416 1056489 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1055416..1056489) Methylophaga frappieri 12843359 YP_006292872.1 CDS Q7C_1023 NC_017856.1 1056609 1057550 R PFAM: CheW-like domain; Response regulator receiver domain; Chemotaxis protein CheV complement(1056609..1057550) Methylophaga frappieri 12843360 YP_006292873.1 CDS Q7C_1025 NC_017856.1 1058016 1060184 D PFAM: RNB domain; Ribonuclease B OB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; 3'-to-5' exoribonuclease RNase R 1058016..1060184 Methylophaga frappieri 12843362 YP_006292874.1 CDS Q7C_1027 NC_017856.1 1060380 1061261 D PFAM: HDOD domain; signal transduction protein 1060380..1061261 Methylophaga frappieri 12843364 YP_006292875.1 CDS Q7C_1029 NC_017856.1 1062056 1062364 R FIG01062552; hypothetical protein complement(1062056..1062364) Methylophaga frappieri 12843366 YP_006292876.1 CDS Q7C_1030 NC_017856.1 1062374 1062502 R FIG01062552; hypothetical protein complement(1062374..1062502) Methylophaga frappieri 12843367 YP_006292877.1 CDS Q7C_1031 NC_017856.1 1062773 1063207 R hypothetical protein complement(1062773..1063207) Methylophaga frappieri 12843368 YP_006292878.1 CDS Q7C_1032 NC_017856.1 1063331 1063552 R hypothetical protein complement(1063331..1063552) Methylophaga frappieri 12843369 YP_006292879.1 CDS Q7C_1033 NC_017856.1 1063799 1064002 R hypothetical protein complement(1063799..1064002) Methylophaga frappieri 12843370 YP_006292880.1 CDS Q7C_1034 NC_017856.1 1064042 1064290 R hypothetical protein complement(1064042..1064290) Methylophaga frappieri 12843371 YP_006292881.1 CDS Q7C_1035 NC_017856.1 1064357 1064584 R hypothetical protein complement(1064357..1064584) Methylophaga frappieri 12843372 YP_006292882.1 CDS Q7C_1036 NC_017856.1 1064651 1064935 R hypothetical protein complement(1064651..1064935) Methylophaga frappieri 12843373 YP_006292883.1 CDS Q7C_1037 NC_017856.1 1064999 1065124 R hypothetical protein complement(1064999..1065124) Methylophaga frappieri 12843374 YP_006292884.1 CDS Q7C_1038 NC_017856.1 1065360 1065785 R hypothetical protein complement(1065360..1065785) Methylophaga frappieri 12843375 YP_006292885.1 CDS Q7C_1039 NC_017856.1 1066146 1066289 D hypothetical protein 1066146..1066289 Methylophaga frappieri 12843376 YP_006292886.1 CDS Q7C_1040 NC_017856.1 1066331 1066882 R PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST complement(1066331..1066882) Methylophaga frappieri 12843377 YP_006292887.1 CDS Q7C_1041 NC_017856.1 1066894 1067919 R PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3; CRISPR type I-F/YPEST-associated protein Csy3 complement(1066894..1067919) Methylophaga frappieri 12843378 YP_006292888.1 CDS Q7C_1042 NC_017856.1 1067940 1068881 R PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2; CRISPR type I-F/YPEST-associated protein Csy2 complement(1067940..1068881) Methylophaga frappieri 12843379 YP_006292889.1 CDS Q7C_1043 NC_017856.1 1068878 1070143 R PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1; CRISPR type I-F/YPEST-associated protein Csy1 complement(1068878..1070143) Methylophaga frappieri 12843380 YP_006292890.1 CDS Q7C_1044 NC_017856.1 1070136 1073534 R TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3, subtype I-F/YPEST complement(1070136..1073534) Methylophaga frappieri 12843381 YP_006292891.1 CDS Q7C_1045 NC_017856.1 1073825 1074820 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein Cas1 complement(1073825..1074820) Methylophaga frappieri 12843382 YP_006292892.1 CDS Q7C_1046 NC_017856.1 1074860 1075078 R PFAM: HIRAN domain; HIRAN domain-containing protein complement(1074860..1075078) Methylophaga frappieri 12843383 YP_006292893.1 CDS Q7C_1047 NC_017856.1 1075234 1076196 R transcriptional regulator complement(1075234..1076196) Methylophaga frappieri 12843384 YP_006292894.1 CDS Q7C_1048 NC_017856.1 1076287 1076400 R hypothetical protein complement(1076287..1076400) Methylophaga frappieri 12843385 YP_006292895.1 CDS Q7C_1049 NC_017856.1 1076358 1077005 D protein containing plastocyanin/azurin family domain 1076358..1077005 Methylophaga frappieri 12843386 YP_006292896.1 CDS Q7C_1050 NC_017856.1 1076986 1079331 D PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1076986..1079331 Methylophaga frappieri 12843387 YP_006292897.1 CDS Q7C_1051 NC_017856.1 1079294 1080124 D PFAM: Protein of unknown function (DUF3034); hypothetical protein 1079294..1080124 Methylophaga frappieri 12843388 YP_006292898.1 CDS Q7C_1052 NC_017856.1 1080124 1080543 D PFAM: Bacterial-like globin; Cyanoglobin, Hemoglobin-like protein HbN 1080124..1080543 Methylophaga frappieri 12843389 YP_006292899.1 CDS Q7C_1053 NC_017856.1 1080554 1082299 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; glucose dehydrogenase, PQQ-dependent complement(1080554..1082299) Methylophaga frappieri 12843390 YP_006292900.1 CDS Q7C_1054 NC_017856.1 1082317 1082916 R PFAM: Isochorismatase family; isochorismatase complement(1082317..1082916) Methylophaga frappieri 12843391 YP_006292901.1 CDS Q7C_1057 NC_017856.1 1083922 1085862 D PFAM: SMP-30/Gluconolaconase/LRE-like region; Glucose / Sorbosone dehydrogenase; L-sorbosone dehydrogenase 1083922..1085862 Methylophaga frappieri 12843393 YP_006292902.1 CDS Q7C_1058 NC_017856.1 1085971 1086147 D hypothetical protein 1085971..1086147 Methylophaga frappieri 12843394 YP_006292903.1 CDS Q7C_1059 NC_017856.1 1086144 1087670 R PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(1086144..1087670) Methylophaga frappieri 12843395 YP_006292904.1 CDS Q7C_1060 NC_017856.1 1087688 1088941 R PFAM: EAL domain; EAL-domain associated signalling protein domain; hypothetical protein complement(1087688..1088941) Methylophaga frappieri 12843396 YP_006292905.1 CDS Q7C_1061 NC_017856.1 1088956 1090884 R PFAM: Protein kinase domain; Stage II sporulation protein E (SpoIIE); Serine/threonine protein kinase complement(1088956..1090884) Methylophaga frappieri 12843397 YP_006292906.1 CDS Q7C_1062 NC_017856.1 1090896 1092362 R PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter complement(1090896..1092362) Methylophaga frappieri 12843398 YP_006292907.1 CDS Q7C_1063 NC_017856.1 1092652 1093272 R PFAM: Response regulator receiver domain; ANTAR domain; Response regulator NasT complement(1092652..1093272) Methylophaga frappieri 12843399 YP_006292908.1 CDS Q7C_1064 NC_017856.1 1093579 1094820 R hypothetical protein complement(1093579..1094820) Methylophaga frappieri 12843400 YP_006292909.1 CDS Q7C_1065 NC_017856.1 1094958 1097618 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Assimilatory nitrate reductase large subunit complement(1094958..1097618) Methylophaga frappieri 12843401 YP_006292910.1 CDS Q7C_1066 NC_017856.1 1097629 1097940 R PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit complement(1097629..1097940) Methylophaga frappieri 12843402 YP_006292911.1 CDS Q7C_1067 NC_017856.1 1097940 1100372 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit complement(1097940..1100372) Methylophaga frappieri 12843403 YP_006292912.1 CDS Q7C_1068 NC_017856.1 1100492 1100638 R hypothetical protein complement(1100492..1100638) Methylophaga frappieri 12843404 YP_006292913.1 CDS Q7C_1069 NC_017856.1 1100592 1101047 R TIGRFAM: hypothetical protein; hypothetical protein complement(1100592..1101047) Methylophaga frappieri 12843405 YP_006292914.1 CDS Q7C_1070 NC_017856.1 1101075 1101590 R PFAM: MarR family; MarR family transcriptional regulator complement(1101075..1101590) Methylophaga frappieri 12843406 YP_006292915.1 CDS Q7C_1071 NC_017856.1 1101692 1103104 D PFAM: YcjX-like family, DUF463; ATPase 1101692..1103104 Methylophaga frappieri 12843407 YP_006292916.1 CDS Q7C_1072 NC_017856.1 1103101 1104135 D PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein; hypothetical protein 1103101..1104135 Methylophaga frappieri 12843408 YP_006292917.1 CDS Q7C_1073 NC_017856.1 1104117 1106771 R PFAM: GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(1104117..1106771) Methylophaga frappieri 12843409 YP_006292918.1 CDS Q7C_1074 NC_017856.1 1106919 1107035 D hypothetical protein 1106919..1107035 Methylophaga frappieri 12843410 YP_006292919.1 CDS Q7C_1075 NC_017856.1 1107038 1108024 R hypothetical protein complement(1107038..1108024) Methylophaga frappieri 12843411 YP_006292920.1 CDS Q7C_1076 NC_017856.1 1108149 1110749 R hypothetical protein complement(1108149..1110749) Methylophaga frappieri 12843412 YP_006292921.1 CDS Q7C_1077 NC_017856.1 1110815 1111525 R hypothetical protein complement(1110815..1111525) Methylophaga frappieri 12843413 YP_006292922.1 CDS Q7C_1078 NC_017856.1 1111922 1112185 D hypothetical protein 1111922..1112185 Methylophaga frappieri 12843414 YP_006292923.1 CDS Q7C_1079 NC_017856.1 1112166 1112321 R hypothetical protein complement(1112166..1112321) Methylophaga frappieri 12843415 YP_006292924.1 CDS Q7C_1080 NC_017856.1 1112293 1112985 R PFAM: Nitroreductase family; nitroreductase complement(1112293..1112985) Methylophaga frappieri 12843416 YP_006292925.1 CDS Q7C_1081 NC_017856.1 1113518 1114384 R PFAM: Putative esterase; hydrolase of the alpha/beta superfamily complement(1113518..1114384) Methylophaga frappieri 12843417 YP_006292926.1 CDS Q7C_1082 NC_017856.1 1114436 1115056 R PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenylyl-sulfate reductase complement(1114436..1115056) Methylophaga frappieri 12843418 YP_006292927.1 CDS Q7C_1085 NC_017856.1 1115789 1116346 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(1115789..1116346) Methylophaga frappieri 12843421 YP_006292928.1 CDS Q7C_1086 NC_017856.1 1116396 1118228 R PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C complement(1116396..1118228) Methylophaga frappieri 12843422 YP_006292929.1 CDS Q7C_1087 NC_017856.1 1118220 1118366 D hypothetical protein 1118220..1118366 Methylophaga frappieri 12843423 YP_006292930.1 CDS Q7C_1088 NC_017856.1 1118336 1118479 R hypothetical protein complement(1118336..1118479) Methylophaga frappieri 12843424 YP_006292931.1 CDS Q7C_1089 NC_017856.1 1118560 1122033 D PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 1118560..1122033 Methylophaga frappieri 12843425 YP_006292932.1 CDS Q7C_1090 NC_017856.1 1122033 1122800 D PFAM: Methyltransferase domain; S-adenosylmethionine-dependent methyltransferase 1122033..1122800 Methylophaga frappieri 12843426 YP_006292933.1 CDS Q7C_1091 NC_017856.1 1122878 1123699 D PFAM: Protein of unknown function (DUF785); hypothetical protein 1122878..1123699 Methylophaga frappieri 12843427 YP_006292934.1 CDS Q7C_1092 NC_017856.1 1123719 1125233 D hypothetical protein 1123719..1125233 Methylophaga frappieri 12843428 YP_006292935.1 CDS Q7C_1093 NC_017856.1 1125230 1126225 D TIGRFAM: alpha-L-glutamate ligase-related protein; hypothetical protein 1125230..1126225 Methylophaga frappieri 12843429 YP_006292936.1 CDS Q7C_1094 NC_017856.1 1126289 1126957 D PFAM: Protein of unknown function (DUF541); hypothetical protein 1126289..1126957 Methylophaga frappieri 12843430 YP_006292937.1 CDS Q7C_1095 NC_017856.1 1127035 1128051 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase, Gfo/Idh/MocA family complement(1127035..1128051) Methylophaga frappieri 12843431 YP_006292938.1 CDS Q7C_1096 NC_017856.1 1128179 1128691 D PFAM: Redoxin; antioxidant, AhpC/Tsa family 1128179..1128691 Methylophaga frappieri 12843432 YP_006292939.1 CDS Q7C_1097 NC_017856.1 1128728 1129423 R PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); Bacterial regulatory proteins, deoR family; TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A complement(1128728..1129423) Methylophaga frappieri 12843433 YP_006292940.1 CDS Q7C_1098 NC_017856.1 1129501 1130388 D PFAM: Fructosamine kinase; ribulosamine/erythrulosamine 3-kinase 1129501..1130388 Methylophaga frappieri 12843434 YP_006292941.1 CDS Q7C_1099 NC_017856.1 1130392 1130862 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; Low molecular weight protein tyrosine phosphatase 1130392..1130862 Methylophaga frappieri 12843435 YP_006292942.1 CDS Q7C_1100 NC_017856.1 1130925 1132409 D PFAM: Citrate transporter; Na+/H+ antiporter NhaD type 1130925..1132409 Methylophaga frappieri 12843436 YP_006292943.1 CDS Q7C_1101 NC_017856.1 1132411 1133085 R PFAM: MaoC like domain; Acyl dehydratase complement(1132411..1133085) Methylophaga frappieri 12843437 YP_006292944.1 CDS Q7C_1102 NC_017856.1 1133302 1134363 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 1133302..1134363 Methylophaga frappieri 12843438 YP_006292945.1 CDS Q7C_1103 NC_017856.1 1134569 1135150 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; Electron transport complex protein RnfA 1134569..1135150 Methylophaga frappieri 12843439 YP_006292946.1 CDS Q7C_1104 NC_017856.1 1135154 1135711 D PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; Electron transport complex protein RnfB 1135154..1135711 Methylophaga frappieri 12843440 YP_006292947.1 CDS Q7C_1105 NC_017856.1 1135711 1137249 D PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; Electron transport complex protein RnfC 1135711..1137249 Methylophaga frappieri 12843441 YP_006292948.1 CDS Q7C_1106 NC_017856.1 1137246 1138271 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; Electron transport complex protein RnfD 1137246..1138271 Methylophaga frappieri 12843442 YP_006292949.1 CDS Q7C_1107 NC_017856.1 1138272 1138910 D PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; Electron transport complex protein RnfG 1138272..1138910 Methylophaga frappieri 12843443 YP_006292950.1 CDS Q7C_1108 NC_017856.1 1138907 1139596 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; Electron transport complex protein RnfE 1138907..1139596 Methylophaga frappieri 12843444 YP_006292951.1 CDS Q7C_1109 NC_017856.1 1139593 1140243 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; Endonuclease III 1139593..1140243 Methylophaga frappieri 12843445 YP_006292952.1 CDS Q7C_1110 NC_017856.1 1140246 1140677 D PFAM: Domain of unknown function (DUF1841); hypothetical protein 1140246..1140677 Methylophaga frappieri 12843446 YP_006292953.1 CDS Q7C_1111 NC_017856.1 1140717 1141724 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; Similar to arginate lyase; Bifunctional protein: zinc-containing alcohol dehydrogenase, quinone oxidoreductase ( NADPH:quinone reductase) 1140717..1141724 Methylophaga frappieri 12843447 YP_006292954.1 CDS Q7C_1112 NC_017856.1 1141784 1142272 D Cytochrome c5 1141784..1142272 Methylophaga frappieri 12843448 YP_006292955.1 CDS Q7C_1113 NC_017856.1 1142374 1145193 D PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B 1142374..1145193 Methylophaga frappieri 12843449 YP_006292956.1 CDS Q7C_1114 NC_017856.1 1145193 1145573 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Na(+) H(+) antiporter subunit C 1145193..1145573 Methylophaga frappieri 12843450 YP_006292957.1 CDS Q7C_1115 NC_017856.1 1145570 1147096 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Na(+) H(+) antiporter subunit D 1145570..1147096 Methylophaga frappieri 12843451 YP_006292958.1 CDS Q7C_1116 NC_017856.1 1147201 1147590 D PFAM: Na+/H+ ion antiporter subunit; Na(+) H(+) antiporter subunit E 1147201..1147590 Methylophaga frappieri 12843452 YP_006292959.1 CDS Q7C_1117 NC_017856.1 1147584 1147853 D PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); Na(+) H(+) antiporter subunit F 1147584..1147853 Methylophaga frappieri 12843453 YP_006292960.1 CDS Q7C_1118 NC_017856.1 1147856 1148179 D PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; Na(+) H(+) antiporter subunit G 1147856..1148179 Methylophaga frappieri 12843454 YP_006292961.1 CDS Q7C_1119 NC_017856.1 1148176 1148640 D PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 1148176..1148640 Methylophaga frappieri 12843455 YP_006292962.1 CDS Q7C_1120 NC_017856.1 1148956 1149504 R PFAM: Domain of unkown function (DUF1775); nuclear export factor GLE1 complement(1148956..1149504) Methylophaga frappieri 12843456 YP_006292963.1 CDS Q7C_1121 NC_017856.1 1149516 1151528 R PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep complement(1149516..1151528) Methylophaga frappieri 12843457 YP_006292964.1 CDS Q7C_1122 NC_017856.1 1151533 1153035 R PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; hypothetical protein complement(1151533..1153035) Methylophaga frappieri 12843458 YP_006292965.1 CDS Q7C_1123 NC_017856.1 1153220 1154383 D PFAM: Protein of unknown function, DUF481; salt-induced outer membrane protein 1153220..1154383 Methylophaga frappieri 12843459 YP_006292966.1 CDS Q7C_1124 NC_017856.1 1154675 1154989 R PFAM: Protein of unknown function (DUF1255); hypothetical protein complement(1154675..1154989) Methylophaga frappieri 12843460 YP_006292967.1 CDS Q7C_1125 NC_017856.1 1155045 1155743 R hypothetical protein complement(1155045..1155743) Methylophaga frappieri 12843461 YP_006292968.1 CDS Q7C_1126 NC_017856.1 1155766 1156020 R PFAM: Protein of unknown function (DUF526); hypothetical protein complement(1155766..1156020) Methylophaga frappieri 12843462 YP_006292969.1 CDS Q7C_1127 NC_017856.1 1156145 1156570 D PFAM: Protein of unknown function (DUF1043); hypothetical protein 1156145..1156570 Methylophaga frappieri 12843463 YP_006292970.1 CDS Q7C_1128 NC_017856.1 1156572 1158026 R PFAM: Bacterial protein of unknown function (DUF853); ATPase complement(1156572..1158026) Methylophaga frappieri 12843464 YP_006292971.1 CDS Q7C_1129 NC_017856.1 1158129 1159064 R hypothetical protein complement(1158129..1159064) Methylophaga frappieri 12843465 YP_006292972.1 CDS Q7C_1130 NC_017856.1 1159162 1159989 R PFAM: Leucine carboxyl methyltransferase; Phosphoribosylamine--glycine ligase complement(1159162..1159989) Methylophaga frappieri 12843466 YP_006292973.1 CDS Q7C_1131 NC_017856.1 1160122 1160532 D hypothetical protein 1160122..1160532 Methylophaga frappieri 12843467 YP_006292974.1 CDS Q7C_1132 NC_017856.1 1160601 1162340 R PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha complement(1160601..1162340) Methylophaga frappieri 12843468 YP_006292975.1 CDS Q7C_1133 NC_017856.1 1162333 1165824 R PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta complement(1162333..1165824) Methylophaga frappieri 12843469 YP_006292976.1 CDS Q7C_1134 NC_017856.1 1165821 1169033 R PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma complement(1165821..1169033) Methylophaga frappieri 12843470 YP_006292977.1 CDS Q7C_1135 NC_017856.1 1169264 1169725 D hypothetical protein 1169264..1169725 Methylophaga frappieri 12842380 YP_006292978.1 CDS Q7C_1136 NC_017856.1 1169735 1169893 D PFAM: Uncharacterized protein family UPF0057; Stress induced hydrophobic peptide 1169735..1169893 Methylophaga frappieri 12842381 YP_006292979.1 CDS Q7C_1137 NC_017856.1 1169944 1170486 R PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome B561 complement(1169944..1170486) Methylophaga frappieri 12842382 YP_006292980.1 CDS Q7C_1138 NC_017856.1 1170535 1171089 R hypothetical protein complement(1170535..1171089) Methylophaga frappieri 12842383 YP_006292981.1 CDS Q7C_1139 NC_017856.1 1171508 1172779 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Sulfide-quinone reductase complement(1171508..1172779) Methylophaga frappieri 12842384 YP_006292982.1 CDS Q7C_1140 NC_017856.1 1172786 1173682 R PFAM: Hsp33 protein; 33 kDa chaperonin complement(1172786..1173682) Methylophaga frappieri 12842385 YP_006292983.1 CDS Q7C_1141 NC_017856.1 1173790 1175697 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; Chaperone protein HtpG complement(1173790..1175697) Methylophaga frappieri 12842386 YP_006292984.1 CDS Q7C_1142 NC_017856.1 1175678 1175800 D hypothetical protein 1175678..1175800 Methylophaga frappieri 12842387 YP_006292985.1 CDS Q7C_1143 NC_017856.1 1176014 1176418 D PFAM: Protein of unknown function (DUF785); hypothetical protein 1176014..1176418 Methylophaga frappieri 12842388 YP_006292986.1 CDS Q7C_1144 NC_017856.1 1176473 1176613 R hypothetical protein complement(1176473..1176613) Methylophaga frappieri 12842389 YP_006292987.1 CDS Q7C_1145 NC_017856.1 1176617 1177285 D PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase family protein 1176617..1177285 Methylophaga frappieri 12842390 YP_006292988.1 CDS Q7C_1146 NC_017856.1 1177282 1178070 R TIGRFAM: methyltransferase, FkbM family; hypothetical protein complement(1177282..1178070) Methylophaga frappieri 12842391 YP_006292989.1 CDS Q7C_1147 NC_017856.1 1178170 1178868 R PFAM: Glutamine amidotransferase class-I; glutamine amidotransferase complement(1178170..1178868) Methylophaga frappieri 12842392 YP_006292990.1 CDS Q7C_1148 NC_017856.1 1178986 1179135 D PFAM: Protein of unknown function (DUF3096); hypothetical protein 1178986..1179135 Methylophaga frappieri 12842393 YP_006292991.1 CDS Q7C_1149 NC_017856.1 1179175 1179300 R hypothetical protein complement(1179175..1179300) Methylophaga frappieri 12842394 YP_006292992.1 CDS Q7C_1150 NC_017856.1 1179299 1179439 D hypothetical protein 1179299..1179439 Methylophaga frappieri 12842395 YP_006292993.1 CDS Q7C_1151 NC_017856.1 1179494 1179892 R PFAM: AIG2-like family; hypothetical protein complement(1179494..1179892) Methylophaga frappieri 12842396 YP_006292994.1 CDS Q7C_1152 NC_017856.1 1179951 1180865 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl-Q-tRNA synthetase 1179951..1180865 Methylophaga frappieri 12842397 YP_006292995.1 CDS Q7C_1153 NC_017856.1 1180951 1182486 D PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; carbon-nitrogen hydrolase 1180951..1182486 Methylophaga frappieri 12842398 YP_006292996.1 CDS Q7C_1154 NC_017856.1 1182531 1183880 R PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(1182531..1183880) Methylophaga frappieri 12842399 YP_006292997.1 CDS Q7C_1155 NC_017856.1 1183977 1184750 R PFAM: Protein of unknown function (DUF328); hypothetical protein complement(1183977..1184750) Methylophaga frappieri 12842400 YP_006292998.1 CDS Q7C_1156 NC_017856.1 1184789 1185091 R glucose-1-phosphate thymidylyltransferase, long form complement(1184789..1185091) Methylophaga frappieri 12842401 YP_006292999.1 CDS Q7C_1157 NC_017856.1 1185284 1185808 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; TRAP-type mannitol/chloroaromatic compound transport system, small permease component 1185284..1185808 Methylophaga frappieri 12842402 YP_006293000.1 CDS Q7C_1158 NC_017856.1 1185808 1187115 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 1185808..1187115 Methylophaga frappieri 12842403 YP_006293001.1 CDS Q7C_1159 NC_017856.1 1187117 1188082 R PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX; translation elongation factor P Lys34:lysine transferase complement(1187117..1188082) Methylophaga frappieri 12842404 YP_006293002.1 CDS Q7C_1160 NC_017856.1 1188155 1188724 R PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P complement(1188155..1188724) Methylophaga frappieri 12842405 YP_006293003.1 CDS Q7C_1161 NC_017856.1 1188778 1189785 D TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein; Lysyl-lysine 2,3-aminomutase 1188778..1189785 Methylophaga frappieri 12842406 YP_006293004.1 CDS Q7C_1162 NC_017856.1 1189791 1190954 R PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Citrate synthase (si) complement(1189791..1190954) Methylophaga frappieri 12842407 YP_006293005.1 CDS Q7C_1163 NC_017856.1 1191051 1192328 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit complement(1191051..1192328) Methylophaga frappieri 12842408 YP_006293006.1 CDS Q7C_1164 NC_017856.1 1192578 1193315 R PFAM: NAD dependent epimerase/dehydratase family; NDP-hexose 4-ketoreductase UrdR complement(1192578..1193315) Methylophaga frappieri 12842409 YP_006293007.1 CDS Q7C_1165 NC_017856.1 1193687 1195726 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor complement(1193687..1195726) Methylophaga frappieri 12842410 YP_006293008.1 CDS Q7C_1166 NC_017856.1 1196306 1198486 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins 1196306..1198486 Methylophaga frappieri 12842411 YP_006293009.1 CDS Q7C_1167 NC_017856.1 1198735 1199688 R PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; Lipoate synthase complement(1198735..1199688) Methylophaga frappieri 12842412 YP_006293010.1 CDS Q7C_1168 NC_017856.1 1199685 1200296 R PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase complement(1199685..1200296) Methylophaga frappieri 12842413 YP_006293011.1 CDS Q7C_1169 NC_017856.1 1200296 1200571 R PFAM: Protein of unknown function (DUF493); lipoate regulatory protein YbeD complement(1200296..1200571) Methylophaga frappieri 12842414 YP_006293012.1 CDS Q7C_1170 NC_017856.1 1200568 1201419 R PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; D-alanine aminotransferase complement(1200568..1201419) Methylophaga frappieri 12842415 YP_006293013.1 CDS Q7C_1171 NC_017856.1 1201423 1202562 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(1201423..1202562) Methylophaga frappieri 12842416 YP_006293014.1 CDS Q7C_1172 NC_017856.1 1202601 1203449 R PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; Rare lipoprotein A complement(1202601..1203449) Methylophaga frappieri 12842417 YP_006293015.1 CDS Q7C_1173 NC_017856.1 1203449 1204429 R TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase; Membrane-bound lytic murein transglycosylase B precursor complement(1203449..1204429) Methylophaga frappieri 12842418 YP_006293016.1 CDS Q7C_1174 NC_017856.1 1204426 1205556 R PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Rod shape-determining protein RodA complement(1204426..1205556) Methylophaga frappieri 12842419 YP_006293017.1 CDS Q7C_1175 NC_017856.1 1205549 1207465 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; Penicillin-binding protein 2 (PBP-2) complement(1205549..1207465) Methylophaga frappieri 12842420 YP_006293018.1 CDS Q7C_1176 NC_017856.1 1207465 1207944 R PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; Rod shape-determining protein MreD complement(1207465..1207944) Methylophaga frappieri 12842421 YP_006293019.1 CDS Q7C_1177 NC_017856.1 1207931 1208887 R PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; Rod shape-determining protein MreC complement(1207931..1208887) Methylophaga frappieri 12842422 YP_006293020.1 CDS Q7C_1178 NC_017856.1 1209009 1210055 R PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; Rod shape-determining protein MreB complement(1209009..1210055) Methylophaga frappieri 12842423 YP_006293021.1 CDS Q7C_1179 NC_017856.1 1210178 1210465 D PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C 1210178..1210465 Methylophaga frappieri 12842424 YP_006293022.1 CDS Q7C_1180 NC_017856.1 1210484 1211938 D PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A 1210484..1211938 Methylophaga frappieri 12842425 YP_006293023.1 CDS Q7C_1183 NC_017856.1 1213028 1214659 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; hypothetical protein 1213028..1214659 Methylophaga frappieri 12842427 YP_006293024.1 CDS Q7C_1184 NC_017856.1 1214663 1215160 D PFAM: AhpC/TSA family; Cytochrome c-type biogenesis protein ResA 1214663..1215160 Methylophaga frappieri 12842428 YP_006293025.1 CDS Q7C_1185 NC_017856.1 1215276 1215512 D PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 1215276..1215512 Methylophaga frappieri 12842429 YP_006293026.1 CDS Q7C_1186 NC_017856.1 1215526 1215681 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 1215526..1215681 Methylophaga frappieri 12842430 YP_006293027.1 CDS Q7C_1187 NC_017856.1 1215788 1216999 D PFAM: EAL domain; HDOD domain; signal transduction protein 1215788..1216999 Methylophaga frappieri 12842431 YP_006293028.1 CDS Q7C_1188 NC_017856.1 1217001 1217948 D PFAM: ABC transporter; multidrug ABC transporter ATPase 1217001..1217948 Methylophaga frappieri 12842432 YP_006293029.1 CDS Q7C_1189 NC_017856.1 1217948 1218697 D ABC transporter permease 1217948..1218697 Methylophaga frappieri 12842433 YP_006293030.1 CDS Q7C_1190 NC_017856.1 1218694 1220043 D PFAM: ABC-type uncharacterized transport system; Mucin 2 1218694..1220043 Methylophaga frappieri 12842434 YP_006293031.1 CDS Q7C_1191 NC_017856.1 1220040 1220915 D hypothetical protein 1220040..1220915 Methylophaga frappieri 12842435 YP_006293032.1 CDS Q7C_1192 NC_017856.1 1220915 1221733 D PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase 1220915..1221733 Methylophaga frappieri 12842436 YP_006293033.1 CDS Q7C_1193 NC_017856.1 1221762 1222043 R PFAM: Cytochrome c; cytochrome c553 complement(1221762..1222043) Methylophaga frappieri 12842437 YP_006293034.1 CDS Q7C_1194 NC_017856.1 1222119 1223096 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; Ribosomal large subunit pseudouridine synthase D 1222119..1223096 Methylophaga frappieri 12842438 YP_006293035.1 CDS Q7C_1195 NC_017856.1 1223165 1225258 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G-like protein complement(1223165..1225258) Methylophaga frappieri 12842439 YP_006293036.1 CDS Q7C_1196 NC_017856.1 1225455 1225760 R PFAM: Protein of unknown function (DUF2818); hypothetical protein complement(1225455..1225760) Methylophaga frappieri 12842440 YP_006293037.1 CDS Q7C_1197 NC_017856.1 1225767 1227200 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH-ubiquinone oxidoreductase subunit N complement(1225767..1227200) Methylophaga frappieri 12842441 YP_006293038.1 CDS Q7C_1200 NC_017856.1 1228744 1230681 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH-ubiquinone oxidoreductase subunit L complement(1228744..1230681) Methylophaga frappieri 12842443 YP_006293039.1 CDS Q7C_1201 NC_017856.1 1230685 1230990 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit K complement(1230685..1230990) Methylophaga frappieri 12842444 YP_006293040.1 CDS Q7C_1202 NC_017856.1 1230990 1231598 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone oxidoreductase subunit J complement(1230990..1231598) Methylophaga frappieri 12842445 YP_006293041.1 CDS Q7C_1203 NC_017856.1 1231608 1232099 R TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-ubiquinone oxidoreductase subunit I complement(1231608..1232099) Methylophaga frappieri 12842446 YP_006293042.1 CDS Q7C_1204 NC_017856.1 1232096 1233151 R PFAM: NADH dehydrogenase; NADH-ubiquinone oxidoreductase subunit H complement(1232096..1233151) Methylophaga frappieri 12842447 YP_006293043.1 CDS Q7C_1205 NC_017856.1 1233144 1235498 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G; NADH-ubiquinone oxidoreductase subunit G complement(1233144..1235498) Methylophaga frappieri 12842448 YP_006293044.1 CDS Q7C_1206 NC_017856.1 1235491 1236795 R PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH-ubiquinone oxidoreductase subunit F complement(1235491..1236795) Methylophaga frappieri 12842449 YP_006293045.1 CDS Q7C_1207 NC_017856.1 1236795 1237304 R PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-ubiquinone oxidoreductase subunit E complement(1236795..1237304) Methylophaga frappieri 12842450 YP_006293046.1 CDS Q7C_1208 NC_017856.1 1237301 1238554 R PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH-ubiquinone oxidoreductase subunit D complement(1237301..1238554) Methylophaga frappieri 12842451 YP_006293047.1 CDS Q7C_1209 NC_017856.1 1238554 1239213 R PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH-ubiquinone oxidoreductase subunit C complement(1238554..1239213) Methylophaga frappieri 12842452 YP_006293048.1 CDS Q7C_1210 NC_017856.1 1239210 1239701 R PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-ubiquinone oxidoreductase subunit B complement(1239210..1239701) Methylophaga frappieri 12842453 YP_006293049.1 CDS Q7C_1211 NC_017856.1 1239692 1240060 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH ubiquinone oxidoreductase subunit A complement(1239692..1240060) Methylophaga frappieri 12842454 YP_006293050.1 CDS Q7C_1212 NC_017856.1 1240428 1241306 D PFAM: EamA-like transporter family; TIGRFAM: rarD protein; protein rarD 1240428..1241306 Methylophaga frappieri 12842455 YP_006293051.1 CDS Q7C_1214 NC_017856.1 1241448 1241780 R PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; TC 3.A.5.1.1; preprotein translocase subunit SecG complement(1241448..1241780) Methylophaga frappieri 12842457 YP_006293052.1 CDS Q7C_1215 NC_017856.1 1241789 1242568 R PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase complement(1241789..1242568) Methylophaga frappieri 12842458 YP_006293053.1 CDS Q7C_1216 NC_017856.1 1242610 1243968 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase complement(1242610..1243968) Methylophaga frappieri 12842459 YP_006293054.1 CDS Q7C_1217 NC_017856.1 1243961 1244749 R PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; Dihydropteroate synthase complement(1243961..1244749) Methylophaga frappieri 12842460 YP_006293055.1 CDS Q7C_1218 NC_017856.1 1244810 1246705 R PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; Cell division protein FtsH complement(1244810..1246705) Methylophaga frappieri 12842461 YP_006293056.1 CDS Q7C_1219 NC_017856.1 1246751 1247368 R PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J complement(1246751..1247368) Methylophaga frappieri 12842462 YP_006293057.1 CDS Q7C_1220 NC_017856.1 1247355 1247573 R hypothetical protein complement(1247355..1247573) Methylophaga frappieri 12842463 YP_006293058.1 CDS Q7C_1221 NC_017856.1 1247834 1248310 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA complement(1247834..1248310) Methylophaga frappieri 12842464 YP_006293059.1 CDS Q7C_1222 NC_017856.1 1248310 1251528 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(1248310..1251528) Methylophaga frappieri 12842465 YP_006293060.1 CDS Q7C_1223 NC_017856.1 1251535 1252665 R PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(1251535..1252665) Methylophaga frappieri 12842466 YP_006293061.1 CDS Q7C_1224 NC_017856.1 1252833 1253852 D PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 1252833..1253852 Methylophaga frappieri 12842467 YP_006293062.1 CDS Q7C_1225 NC_017856.1 1253845 1254660 D PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1253845..1254660 Methylophaga frappieri 12842468 YP_006293063.1 CDS Q7C_1226 NC_017856.1 1254702 1255175 R PFAM: LTXXQ motif; LTXXQ motif protein complement(1254702..1255175) Methylophaga frappieri 12842469 YP_006293064.1 CDS Q7C_1227 NC_017856.1 1255367 1256044 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 1255367..1256044 Methylophaga frappieri 12842470 YP_006293065.1 CDS Q7C_1228 NC_017856.1 1256054 1257421 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; hypothetical protein 1256054..1257421 Methylophaga frappieri 12842471 YP_006293066.1 CDS Q7C_1229 NC_017856.1 1257658 1260819 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB complement(1257658..1260819) Methylophaga frappieri 12842472 YP_006293067.1 CDS Q7C_1230 NC_017856.1 1260819 1261967 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein complement(1260819..1261967) Methylophaga frappieri 12842473 YP_006293068.1 CDS Q7C_1231 NC_017856.1 1262098 1262598 D MarR family transcriptional regulator 1262098..1262598 Methylophaga frappieri 12842474 YP_006293069.1 CDS Q7C_1232 NC_017856.1 1262826 1263131 R PFAM: Cell division protein ZapA; Z-ring-associated protein ZapA complement(1262826..1263131) Methylophaga frappieri 12842475 YP_006293070.1 CDS Q7C_1233 NC_017856.1 1263128 1263337 R TIGRFAM: TIGR02449 family protein; hypothetical protein complement(1263128..1263337) Methylophaga frappieri 12842476 YP_006293071.1 CDS Q7C_1234 NC_017856.1 1263545 1263991 D PFAM: Uncharacterised protein family (UPF0149); hypothetical protein 1263545..1263991 Methylophaga frappieri 12842477 YP_006293072.1 CDS Q7C_1235 NC_017856.1 1263991 1265301 D PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Xaa-Pro aminopeptidase 1263991..1265301 Methylophaga frappieri 12842478 YP_006293073.1 CDS Q7C_1236 NC_017856.1 1265307 1266509 D PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenol hydroxylase 1265307..1266509 Methylophaga frappieri 12842479 YP_006293074.1 CDS Q7C_1237 NC_017856.1 1266509 1267684 D PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1266509..1267684 Methylophaga frappieri 12842480 YP_006293075.1 CDS Q7C_1238 NC_017856.1 1267673 1268350 R lipoprotein complement(1267673..1268350) Methylophaga frappieri 12842481 YP_006293076.1 CDS Q7C_1239 NC_017856.1 1268337 1268657 R hypothetical protein complement(1268337..1268657) Methylophaga frappieri 12842482 YP_006293077.1 CDS Q7C_1240 NC_017856.1 1268641 1270029 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase RhlB complement(1268641..1270029) Methylophaga frappieri 12842483 YP_006293078.1 CDS Q7C_1241 NC_017856.1 1270052 1270378 D PFAM: Thioredoxin; TIGRFAM: thioredoxin; Thioredoxin 1270052..1270378 Methylophaga frappieri 12842484 YP_006293079.1 CDS Q7C_1242 NC_017856.1 1270478 1272634 D PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; ATP-dependent DNA helicase UvrD/PcrA 1270478..1272634 Methylophaga frappieri 12842485 YP_006293080.1 CDS Q7C_1243 NC_017856.1 1272652 1273746 D PFAM: Bacterial extracellular solute-binding protein, family 7; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 1272652..1273746 Methylophaga frappieri 12842486 YP_006293081.1 CDS Q7C_1244 NC_017856.1 1273743 1273991 D hypothetical protein 1273743..1273991 Methylophaga frappieri 12842487 YP_006293082.1 CDS Q7C_1245 NC_017856.1 1273969 1274502 D PFAM: Protein of unknown function, DUF; copper amine oxidase N-terminal protein 1273969..1274502 Methylophaga frappieri 12842488 YP_006293083.1 CDS Q7C_1246 NC_017856.1 1274533 1275375 D PFAM: EamA-like transporter family; drug/metabolite transporter (DMT) superfamily permease 1274533..1275375 Methylophaga frappieri 12842489 YP_006293084.1 CDS Q7C_1247 NC_017856.1 1275427 1276659 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase SrmB 1275427..1276659 Methylophaga frappieri 12842490 YP_006293085.1 CDS Q7C_1248 NC_017856.1 1276709 1279543 R PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(1276709..1279543) Methylophaga frappieri 12842491 YP_006293086.1 CDS Q7C_1249 NC_017856.1 1279558 1281012 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen synthase complement(1279558..1281012) Methylophaga frappieri 12842492 YP_006293087.1 CDS Q7C_1250 NC_017856.1 1281089 1282558 D PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1281089..1282558 Methylophaga frappieri 12842493 YP_006293088.1 CDS Q7C_1251 NC_017856.1 1282613 1283515 R PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase complement(1282613..1283515) Methylophaga frappieri 12842494 YP_006293089.1 CDS Q7C_1252 NC_017856.1 1283578 1283979 D PFAM: Flagellar basal body-associated protein FliL; flagellar protein 1283578..1283979 Methylophaga frappieri 12842495 YP_006293090.1 CDS Q7C_1253 NC_017856.1 1284028 1284534 D PFAM: Flagellar basal body-associated protein FliL; flagellar biosynthesis protein FliL 1284028..1284534 Methylophaga frappieri 12842496 YP_006293091.1 CDS Q7C_1254 NC_017856.1 1284536 1285558 D PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 1284536..1285558 Methylophaga frappieri 12842497 YP_006293092.1 CDS Q7C_1255 NC_017856.1 1285555 1286016 D PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein FliN 1285555..1286016 Methylophaga frappieri 12842498 YP_006293093.1 CDS Q7C_1256 NC_017856.1 1286037 1286429 D PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biosynthesis protein FliO 1286037..1286429 Methylophaga frappieri 12842499 YP_006293094.1 CDS Q7C_1257 NC_017856.1 1286426 1287163 D PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthesis protein FliP 1286426..1287163 Methylophaga frappieri 12842500 YP_006293095.1 CDS Q7C_1258 NC_017856.1 1287168 1287437 D PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthesis protein FliQ 1287168..1287437 Methylophaga frappieri 12842501 YP_006293096.1 CDS Q7C_1259 NC_017856.1 1287485 1288219 D PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthesis protein FliR 1287485..1288219 Methylophaga frappieri 12842502 YP_006293097.1 CDS Q7C_1260 NC_017856.1 1288212 1289351 D PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthesis protein FlhB 1288212..1289351 Methylophaga frappieri 12842503 YP_006293098.1 CDS Q7C_1261 NC_017856.1 1289370 1291436 D PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 1289370..1291436 Methylophaga frappieri 12842504 YP_006293099.1 CDS Q7C_1262 NC_017856.1 1291451 1292644 D PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthesis protein FlhF 1291451..1292644 Methylophaga frappieri 12842505 YP_006293100.1 CDS Q7C_1263 NC_017856.1 1292637 1293515 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; flagellar synthesis regulator FleN 1292637..1293515 Methylophaga frappieri 12842506 YP_006293101.1 CDS Q7C_1264 NC_017856.1 1293512 1294237 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor for flagellar operon 1293512..1294237 Methylophaga frappieri 12842507 YP_006293102.1 CDS Q7C_1265 NC_017856.1 1294266 1294643 D PFAM: Response regulator receiver domain; chemotaxis regulator 1294266..1294643 Methylophaga frappieri 12842508 YP_006293103.1 CDS Q7C_1266 NC_017856.1 1294664 1295389 D PFAM: Chemotaxis phosphatase, CheZ; Chemotaxis response - phosphatase CheZ 1294664..1295389 Methylophaga frappieri 12842509 YP_006293104.1 CDS Q7C_1267 NC_017856.1 1295401 1297353 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 1295401..1297353 Methylophaga frappieri 12842510 YP_006293105.1 CDS Q7C_1268 NC_017856.1 1297362 1298387 D PFAM: CheB methylesterase; Response regulator receiver domain; Chemotaxis response regulator protein-glutamate methylesterase CheB 1297362..1298387 Methylophaga frappieri 12842511 YP_006293106.1 CDS Q7C_1269 NC_017856.1 1298390 1299130 D PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 1298390..1299130 Methylophaga frappieri 12842512 YP_006293107.1 CDS Q7C_1270 NC_017856.1 1299132 1300049 D PFAM: OmpA family; flagellar motor rotation protein MotB 1299132..1300049 Methylophaga frappieri 12842513 YP_006293108.1 CDS Q7C_1271 NC_017856.1 1300224 1300703 D PFAM: CheW-like domain; Positive regulator of CheA protein activity (CheW) 1300224..1300703 Methylophaga frappieri 12842514 YP_006293109.1 CDS Q7C_1272 NC_017856.1 1300710 1300883 D hypothetical protein 1300710..1300883 Methylophaga frappieri 12842515 YP_006293110.1 CDS Q7C_1273 NC_017856.1 1300903 1301277 D PFAM: Protein of unknown function (DUF2802); hypothetical protein 1300903..1301277 Methylophaga frappieri 12842516 YP_006293111.1 CDS Q7C_1274 NC_017856.1 1301231 1303108 R PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(1301231..1303108) Methylophaga frappieri 12842517 YP_006293112.1 CDS Q7C_1275 NC_017856.1 1303237 1303455 R PFAM: FlhB HrpN YscU SpaS Family; flagellar protein FhlB cytoplasmic domain-containing protein complement(1303237..1303455) Methylophaga frappieri 12842518 YP_006293113.1 CDS Q7C_1276 NC_017856.1 1303536 1305104 R PFAM: Flagellar hook-length control protein FliK; molecular chaperone complement(1303536..1305104) Methylophaga frappieri 12842519 YP_006293114.1 CDS Q7C_1277 NC_017856.1 1305170 1306063 D PFAM: Pentapeptide repeats (8 copies); low-complexity protein 1305170..1306063 Methylophaga frappieri 12842520 YP_006293115.1 CDS Q7C_1278 NC_017856.1 1306069 1306449 R PFAM: Protein of unknown function (DUF525); ApaG protein complement(1306069..1306449) Methylophaga frappieri 12842521 YP_006293116.1 CDS Q7C_1279 NC_017856.1 1306458 1307426 R PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase complement(1306458..1307426) Methylophaga frappieri 12842522 YP_006293117.1 CDS Q7C_1280 NC_017856.1 1307430 1308140 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase , eukaryotic type complement(1307430..1308140) Methylophaga frappieri 12842523 YP_006293118.1 CDS Q7C_1281 NC_017856.1 1308272 1308979 D PFAM: Protein of unknown function (DUF541); periplasmic/secreted protein 1308272..1308979 Methylophaga frappieri 12842524 YP_006293119.1 CDS Q7C_1282 NC_017856.1 1308976 1310502 R PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; Threonine dehydratase biosynthetic complement(1308976..1310502) Methylophaga frappieri 12842525 YP_006293120.1 CDS Q7C_1283 NC_017856.1 1310608 1311270 D PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 1310608..1311270 Methylophaga frappieri 12842526 YP_006293121.1 CDS Q7C_1284 NC_017856.1 1311320 1312567 D PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; Lipoprotein releasing system transmembrane protein LolC 1311320..1312567 Methylophaga frappieri 12842527 YP_006293122.1 CDS Q7C_1285 NC_017856.1 1312560 1313240 D PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; Lipoprotein releasing system ATP-binding protein LolD 1312560..1313240 Methylophaga frappieri 12842528 YP_006293123.1 CDS Q7C_1286 NC_017856.1 1313230 1313757 R PFAM: Uncharacterized protein conserved in bacteria (DUF2062); hypothetical protein complement(1313230..1313757) Methylophaga frappieri 12842529 YP_006293124.1 CDS Q7C_1287 NC_017856.1 1313802 1316063 D PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; hypothetical protein 1313802..1316063 Methylophaga frappieri 12842530 YP_006293125.1 CDS Q7C_1288 NC_017856.1 1316115 1316750 D PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel family protein 1316115..1316750 Methylophaga frappieri 12842531 YP_006293126.1 CDS Q7C_1289 NC_017856.1 1316747 1317172 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1316747..1317172 Methylophaga frappieri 12842532 YP_006293127.1 CDS Q7C_1290 NC_017856.1 1317169 1318920 D PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; Lipid A export ATP-binding/permease MsbA 1317169..1318920 Methylophaga frappieri 12842533 YP_006293128.1 CDS Q7C_1291 NC_017856.1 1318924 1319901 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1318924..1319901 Methylophaga frappieri 12842534 YP_006293129.1 CDS Q7C_1292 NC_017856.1 1319894 1320070 D PFAM: Trm112p-like protein; hypothetical protein 1319894..1320070 Methylophaga frappieri 12842535 YP_006293130.1 CDS Q7C_1293 NC_017856.1 1320073 1320831 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 1320073..1320831 Methylophaga frappieri 12842536 YP_006293131.1 CDS Q7C_1294 NC_017856.1 1320814 1321092 R hypothetical protein complement(1320814..1321092) Methylophaga frappieri 12842537 YP_006293132.1 CDS Q7C_1295 NC_017856.1 1321076 1323520 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; Ribonuclease E complement(1321076..1323520) Methylophaga frappieri 12842538 YP_006293133.1 CDS Q7C_1296 NC_017856.1 1323922 1325004 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; Ribosomal large subunit pseudouridine synthase C 1323922..1325004 Methylophaga frappieri 12842539 YP_006293134.1 CDS Q7C_1297 NC_017856.1 1325043 1325657 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphoglycolate phosphatase 1325043..1325657 Methylophaga frappieri 12842540 YP_006293135.1 CDS Q7C_1298 NC_017856.1 1325696 1326685 D PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; Periplasmic serine proteases (ClpP class) 1325696..1326685 Methylophaga frappieri 12842541 YP_006293136.1 CDS Q7C_1299 NC_017856.1 1326682 1326831 D hypothetical protein 1326682..1326831 Methylophaga frappieri 12842542 YP_006293137.1 CDS Q7C_1300 NC_017856.1 1326828 1327679 D PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; HD domain-containing protein 1326828..1327679 Methylophaga frappieri 12842543 YP_006293138.1 CDS Q7C_1301 NC_017856.1 1327718 1328365 D PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 1327718..1328365 Methylophaga frappieri 12842544 YP_006293139.1 CDS Q7C_1302 NC_017856.1 1328380 1329255 D PFAM: pfkB family carbohydrate kinase; Ketohexokinase( ) 1328380..1329255 Methylophaga frappieri 12842545 YP_006293140.1 CDS Q7C_1303 NC_017856.1 1329248 1329601 D PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) protein 1329248..1329601 Methylophaga frappieri 12842546 YP_006293141.1 CDS Q7C_1304 NC_017856.1 1329578 1331590 R PFAM: Putative ATPase (DUF699); Domain of unknown function (DUF1726); hypothetical protein complement(1329578..1331590) Methylophaga frappieri 12842547 YP_006293142.1 CDS Q7C_1305 NC_017856.1 1331598 1331801 R PFAM: SlyX; hypothetical protein complement(1331598..1331801) Methylophaga frappieri 12842548 YP_006293143.1 CDS Q7C_1306 NC_017856.1 1331801 1335499 R PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(1331801..1335499) Methylophaga frappieri 12842549 YP_006293144.1 CDS Q7C_1307 NC_017856.1 1335581 1337287 R PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; Transporter associated domain; sodium/hydrogen exchanger complement(1335581..1337287) Methylophaga frappieri 12842550 YP_006293145.1 CDS Q7C_1308 NC_017856.1 1337439 1339097 R PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type; 2-isopropylmalate synthase complement(1337439..1339097) Methylophaga frappieri 12842551 YP_006293146.1 CDS Q7C_1309 NC_017856.1 1339412 1339894 D PFAM: MarR family; AsnC family; AsnC family transcriptional regulator 1339412..1339894 Methylophaga frappieri 12842552 YP_006293147.1 CDS Q7C_1310 NC_017856.1 1340082 1341491 D PFAM: PhoH-like protein; ATPase 1340082..1341491 Methylophaga frappieri 12842553 YP_006293148.1 CDS Q7C_1311 NC_017856.1 1341546 1342163 D PFAM: MbeD/MobD like; PilZ domain; PilZ domain-containing protein 1341546..1342163 Methylophaga frappieri 12842554 YP_006293149.1 CDS Q7C_1312 NC_017856.1 1342160 1342876 R PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein complement(1342160..1342876) Methylophaga frappieri 12842555 YP_006293150.1 CDS Q7C_1313 NC_017856.1 1342870 1343535 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthetase complement(1342870..1343535) Methylophaga frappieri 12842556 YP_006293151.1 CDS Q7C_1314 NC_017856.1 1343532 1344419 R PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; Biotin synthesis protein bioC complement(1343532..1344419) Methylophaga frappieri 12842557 YP_006293152.1 CDS Q7C_1315 NC_017856.1 1344412 1345173 R TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH; Biotin synthesis protein bioH complement(1344412..1345173) Methylophaga frappieri 12842558 YP_006293153.1 CDS Q7C_1316 NC_017856.1 1345163 1346338 R PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1345163..1346338) Methylophaga frappieri 12842559 YP_006293154.1 CDS Q7C_1317 NC_017856.1 1346345 1347352 R PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase; biotin synthase complement(1346345..1347352) Methylophaga frappieri 12842560 YP_006293155.1 CDS Q7C_1318 NC_017856.1 1347311 1348111 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; competence protein F 1347311..1348111 Methylophaga frappieri 12842561 YP_006293156.1 CDS Q7C_1319 NC_017856.1 1348145 1349212 D PFAM: Protein of unknown function, DUF484; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1348145..1349212 Methylophaga frappieri 12842562 YP_006293157.1 CDS Q7C_1320 NC_017856.1 1349248 1350066 R PFAM: Staphylococcal nuclease homologue; nuclease-like protein complement(1349248..1350066) Methylophaga frappieri 12842563 YP_006293158.1 CDS Q7C_1321 NC_017856.1 1350081 1350938 R PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; 4-hydroxybenzoate polyprenyltransferase complement(1350081..1350938) Methylophaga frappieri 12842564 YP_006293159.1 CDS Q7C_1322 NC_017856.1 1350935 1351477 R PFAM: Chorismate lyase; chorismate--pyruvate lyase complement(1350935..1351477) Methylophaga frappieri 12842565 YP_006293160.1 CDS Q7C_1323 NC_017856.1 1351474 1353558 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG complement(1351474..1353558) Methylophaga frappieri 12842566 YP_006293161.1 CDS Q7C_1324 NC_017856.1 1353579 1353965 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP complement(1353579..1353965) Methylophaga frappieri 12842567 YP_006293162.1 CDS Q7C_1325 NC_017856.1 1354013 1356184 R PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(1354013..1356184) Methylophaga frappieri 12842568 YP_006293163.1 CDS Q7C_1326 NC_017856.1 1356190 1356450 R PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(1356190..1356450) Methylophaga frappieri 12842569 YP_006293164.1 CDS Q7C_1327 NC_017856.1 1356502 1357113 R PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase complement(1356502..1357113) Methylophaga frappieri 12842570 YP_006293165.1 CDS Q7C_1328 NC_017856.1 1357136 1357252 D hypothetical protein 1357136..1357252 Methylophaga frappieri 12842571 YP_006293166.1 CDS Q7C_1329 NC_017856.1 1357332 1358357 D PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein 1357332..1358357 Methylophaga frappieri 12842572 YP_006293167.1 CDS Q7C_1330 NC_017856.1 1358407 1360083 D PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein 1358407..1360083 Methylophaga frappieri 12842573 YP_006293168.1 CDS Q7C_1331 NC_017856.1 1360076 1361122 D PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein 1360076..1361122 Methylophaga frappieri 12842574 YP_006293169.1 CDS Q7C_1332 NC_017856.1 1361116 1361544 R PFAM: MerR family regulatory protein; MerR, DNA binding; MerR family transcriptional regulator complement(1361116..1361544) Methylophaga frappieri 12842575 YP_006293170.1 CDS Q7C_1333 NC_017856.1 1361629 1362228 D Tellurite resistance protein TehB 1361629..1362228 Methylophaga frappieri 12842576 YP_006293171.1 CDS Q7C_1334 NC_017856.1 1362628 1363482 R PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; protein YicC complement(1362628..1363482) Methylophaga frappieri 12842577 YP_006293172.1 CDS Q7C_1335 NC_017856.1 1363609 1364325 D PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; Ribonuclease PH 1363609..1364325 Methylophaga frappieri 12842578 YP_006293173.1 CDS Q7C_1336 NC_017856.1 1364370 1364927 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; nucleoside 5-triphosphatase RdgB 1364370..1364927 Methylophaga frappieri 12842579 YP_006293174.1 CDS Q7C_1337 NC_017856.1 1364948 1366108 D PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; hypothetical protein 1364948..1366108 Methylophaga frappieri 12842580 YP_006293175.1 CDS Q7C_1338 NC_017856.1 1366146 1366442 D hypothetical protein 1366146..1366442 Methylophaga frappieri 12842581 YP_006293176.1 CDS Q7C_1339 NC_017856.1 1366443 1366958 R hypothetical protein complement(1366443..1366958) Methylophaga frappieri 12842582 YP_006293177.1 CDS Q7C_1340 NC_017856.1 1366959 1368041 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; Threonine synthase complement(1366959..1368041) Methylophaga frappieri 12842583 YP_006293178.1 CDS Q7C_1341 NC_017856.1 1368077 1369387 R PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; Homoserine dehydrogenase complement(1368077..1369387) Methylophaga frappieri 12842584 YP_006293179.1 CDS Q7C_1342 NC_017856.1 1369375 1370574 R PFAM: Aminotransferase class I and II; Aspartate aminotransferase complement(1369375..1370574) Methylophaga frappieri 12842585 YP_006293180.1 CDS Q7C_1343 NC_017856.1 1370668 1371513 D PFAM: HDOD domain; HD-GYP domain (HD superfamily hydrolase) 1370668..1371513 Methylophaga frappieri 12842586 YP_006293181.1 CDS Q7C_1344 NC_017856.1 1371570 1371962 R PFAM: DoxX; hypothetical protein complement(1371570..1371962) Methylophaga frappieri 12842587 YP_006293182.1 CDS Q7C_1345 NC_017856.1 1372139 1372444 D PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA-protein-cysteine S-methyltransferase-like protein 1372139..1372444 Methylophaga frappieri 12842588 YP_006293183.1 CDS Q7C_1346 NC_017856.1 1372441 1373235 R PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1372441..1373235) Methylophaga frappieri 12842589 YP_006293184.1 CDS Q7C_1347 NC_017856.1 1373303 1374133 R Thiol:disulfide interchange protein DsbG precursor complement(1373303..1374133) Methylophaga frappieri 12842590 YP_006293185.1 CDS Q7C_1348 NC_017856.1 1374243 1374764 D PFAM: NlpC/P60 family; lipoprotein NlpC 1374243..1374764 Methylophaga frappieri 12842728 YP_006293186.1 CDS Q7C_1349 NC_017856.1 1374893 1375012 R hypothetical protein complement(1374893..1375012) Methylophaga frappieri 12842729 YP_006293187.1 CDS Q7C_1350 NC_017856.1 1375094 1375885 D PFAM: Trypsin; Trypsin 1375094..1375885 Methylophaga frappieri 12842730 YP_006293188.1 CDS Q7C_1351 NC_017856.1 1375990 1376532 D PFAM: Bacterial transferase hexapeptide (three repeats); carbonic anhydrase, family 3 1375990..1376532 Methylophaga frappieri 12842731 YP_006293189.1 CDS Q7C_1352 NC_017856.1 1376529 1377290 R PFAM: ABC-2 type transporter; multidrug ABC transporter permease complement(1376529..1377290) Methylophaga frappieri 12842732 YP_006293190.1 CDS Q7C_1353 NC_017856.1 1377287 1378243 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(1377287..1378243) Methylophaga frappieri 12842733 YP_006293191.1 CDS Q7C_1354 NC_017856.1 1378376 1378678 R PFAM: Protein of unknown function (DUF3144); hypothetical protein complement(1378376..1378678) Methylophaga frappieri 12842734 YP_006293192.1 CDS Q7C_1355 NC_017856.1 1379072 1381069 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins 1379072..1381069 Methylophaga frappieri 12842735 YP_006293193.1 CDS Q7C_1356 NC_017856.1 1381066 1382424 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Signal transduction histidine kinase complement(1381066..1382424) Methylophaga frappieri 12842736 YP_006293194.1 CDS Q7C_1357 NC_017856.1 1382421 1383125 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1382421..1383125) Methylophaga frappieri 12842737 YP_006293195.1 CDS Q7C_1358 NC_017856.1 1383276 1383557 D hypothetical protein 1383276..1383557 Methylophaga frappieri 12842738 YP_006293196.1 CDS Q7C_1359 NC_017856.1 1383554 1385146 D PFAM: PepSY-associated TM helix; iron-regulated membrane protein 1383554..1385146 Methylophaga frappieri 12842739 YP_006293197.1 CDS Q7C_1360 NC_017856.1 1385146 1385472 D PFAM: Protein of unknown function (DUF3325); hypothetical protein 1385146..1385472 Methylophaga frappieri 12842740 YP_006293198.1 CDS Q7C_1361 NC_017856.1 1385438 1385551 R hypothetical protein complement(1385438..1385551) Methylophaga frappieri 12842741 YP_006293199.1 CDS Q7C_1362 NC_017856.1 1385801 1386646 R PFAM: Metallo-beta-lactamase superfamily; beta-lactamase complement(1385801..1386646) Methylophaga frappieri 12842742 YP_006293200.1 CDS Q7C_1363 NC_017856.1 1386762 1386923 R hypothetical protein complement(1386762..1386923) Methylophaga frappieri 12842743 YP_006293201.1 CDS Q7C_1364 NC_017856.1 1386992 1388080 R hypothetical protein complement(1386992..1388080) Methylophaga frappieri 12842744 YP_006293202.1 CDS Q7C_1365 NC_017856.1 1388140 1388262 R hypothetical protein complement(1388140..1388262) Methylophaga frappieri 12842745 YP_006293203.1 CDS Q7C_1366 NC_017856.1 1388302 1389015 R ZIP zinc transporter family protein complement(1388302..1389015) Methylophaga frappieri 12842746 YP_006293204.1 CDS Q7C_1367 NC_017856.1 1389126 1389461 R PFAM: Domain of unknown function (DUF1508); hypothetical protein complement(1389126..1389461) Methylophaga frappieri 12842747 YP_006293205.1 CDS Q7C_1368 NC_017856.1 1389546 1389665 D hypothetical protein 1389546..1389665 Methylophaga frappieri 12842748 YP_006293206.1 CDS Q7C_1369 NC_017856.1 1389630 1389959 R hypothetical protein complement(1389630..1389959) Methylophaga frappieri 12842749 YP_006293207.1 CDS Q7C_1370 NC_017856.1 1390089 1390901 R PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; hypothetical protein complement(1390089..1390901) Methylophaga frappieri 12842750 YP_006293208.1 CDS Q7C_1371 NC_017856.1 1390944 1391408 R hypothetical protein complement(1390944..1391408) Methylophaga frappieri 12842751 YP_006293209.1 CDS Q7C_1372 NC_017856.1 1391447 1392238 R hypothetical protein complement(1391447..1392238) Methylophaga frappieri 12842752 YP_006293210.1 CDS Q7C_1373 NC_017856.1 1392303 1392668 R PFAM: Protein of unknown function (DUF3478); hypothetical protein complement(1392303..1392668) Methylophaga frappieri 12842753 YP_006293211.1 CDS Q7C_1374 NC_017856.1 1392895 1394388 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase complement(1392895..1394388) Methylophaga frappieri 12842754 YP_006293212.1 CDS Q7C_1375 NC_017856.1 1394390 1395436 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 complement(1394390..1395436) Methylophaga frappieri 12842755 YP_006293213.1 CDS Q7C_1376 NC_017856.1 1395551 1396396 R PFAM: Peptidase family M23; LysM domain; Lipoprotein NlpD complement(1395551..1396396) Methylophaga frappieri 12842756 YP_006293214.1 CDS Q7C_1377 NC_017856.1 1396398 1396973 R PFAM: SNARE associated Golgi protein; lipoprotein B complement(1396398..1396973) Methylophaga frappieri 12842757 YP_006293215.1 CDS Q7C_1378 NC_017856.1 1396973 1397632 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(1396973..1397632) Methylophaga frappieri 12842758 YP_006293216.1 CDS Q7C_1379 NC_017856.1 1397635 1398381 R PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase complement(1397635..1398381) Methylophaga frappieri 12842759 YP_006293217.1 CDS Q7C_1380 NC_017856.1 1398500 1400731 R PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; Topoisomerase IV subunit A complement(1398500..1400731) Methylophaga frappieri 12842760 YP_006293218.1 CDS Q7C_1381 NC_017856.1 1400750 1402663 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; Topoisomerase IV subunit B complement(1400750..1402663) Methylophaga frappieri 12842761 YP_006293219.1 CDS Q7C_1382 NC_017856.1 1402846 1404030 R PFAM: Aminotransferase class I and II; aminotransferase complement(1402846..1404030) Methylophaga frappieri 12842762 YP_006293220.1 CDS Q7C_1383 NC_017856.1 1404027 1406162 R PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein complement(1404027..1406162) Methylophaga frappieri 12842763 YP_006293221.1 CDS Q7C_1384 NC_017856.1 1406228 1406809 R PFAM: Class II Aldolase and Adducin N-terminal domain; ribulose-5-phosphate 4-epimerase complement(1406228..1406809) Methylophaga frappieri 12842764 YP_006293222.1 CDS Q7C_1385 NC_017856.1 1406802 1408016 R TPR domain-containing protein complement(1406802..1408016) Methylophaga frappieri 12842765 YP_006293223.1 CDS Q7C_1386 NC_017856.1 1408016 1408672 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB-like protein complement(1408016..1408672) Methylophaga frappieri 12842766 YP_006293224.1 CDS Q7C_1387 NC_017856.1 1408681 1409088 R PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1408681..1409088) Methylophaga frappieri 12842767 YP_006293225.1 CDS Q7C_1388 NC_017856.1 1409098 1409613 R PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB complement(1409098..1409613) Methylophaga frappieri 12842768 YP_006293226.1 CDS Q7C_1389 NC_017856.1 1409606 1410955 R PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel family protein complement(1409606..1410955) Methylophaga frappieri 12842769 YP_006293227.1 CDS Q7C_1390 NC_017856.1 1410952 1411737 R PFAM: Protein of unknown function (DUF3450); TonB system biopolymer transport component, Chromosome segregation ATPase complement(1410952..1411737) Methylophaga frappieri 12842770 YP_006293228.1 CDS Q7C_1391 NC_017856.1 1412050 1412685 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator complement(1412050..1412685) Methylophaga frappieri 12842771 YP_006293229.1 CDS Q7C_1392 NC_017856.1 1412687 1414021 R PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Periplasmic Sensor signal transduction Histidine Kinase complement(1412687..1414021) Methylophaga frappieri 12842772 YP_006293230.1 CDS Q7C_1393 NC_017856.1 1414102 1415388 D PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde aminotransferase 1414102..1415388 Methylophaga frappieri 12842773 YP_006293231.1 CDS Q7C_1394 NC_017856.1 1415389 1416834 D PFAM: Exonuclease; Exonuclease C-terminal; Exodeoxyribonuclease I 1415389..1416834 Methylophaga frappieri 12842774 YP_006293232.1 CDS Q7C_1395 NC_017856.1 1416937 1419060 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1416937..1419060 Methylophaga frappieri 12842775 YP_006293233.1 CDS Q7C_1396 NC_017856.1 1419179 1419730 R PFAM: Isochorismatase family; isochorismatase complement(1419179..1419730) Methylophaga frappieri 12842776 YP_006293234.1 CDS Q7C_1397 NC_017856.1 1419764 1421080 R PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC precursor complement(1419764..1421080) Methylophaga frappieri 12842777 YP_006293235.1 CDS Q7C_1398 NC_017856.1 1421087 1421410 R PFAM: Rhodanese-like domain; Rhodanese complement(1421087..1421410) Methylophaga frappieri 12842778 YP_006293236.1 CDS Q7C_1399 NC_017856.1 1421425 1422081 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase( ) complement(1421425..1422081) Methylophaga frappieri 12842779 YP_006293237.1 CDS Q7C_1400 NC_017856.1 1422227 1423015 R PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; ABC transporter permease complement(1422227..1423015) Methylophaga frappieri 12842780 YP_006293238.1 CDS Q7C_1401 NC_017856.1 1423012 1423938 R PFAM: ABC transporter; ABC transporter ATP-binding protein complement(1423012..1423938) Methylophaga frappieri 12842781 YP_006293239.1 CDS Q7C_1402 NC_017856.1 1423928 1425121 R PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E complement(1423928..1425121) Methylophaga frappieri 12842782 YP_006293240.1 CDS Q7C_1403 NC_017856.1 1425093 1425377 R PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D complement(1425093..1425377) Methylophaga frappieri 12842783 YP_006293241.1 CDS Q7C_1404 NC_017856.1 1425374 1426105 R PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; Coenzyme PQQ synthesis protein C complement(1425374..1426105) Methylophaga frappieri 12842784 YP_006293242.1 CDS Q7C_1405 NC_017856.1 1426117 1427031 R TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ synthesis protein B complement(1426117..1427031) Methylophaga frappieri 12842785 YP_006293243.1 CDS Q7C_1406 NC_017856.1 1427474 1429252 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein complement(1427474..1429252) Methylophaga frappieri 12842786 YP_006293244.1 CDS Q7C_1407 NC_017856.1 1429447 1430085 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator complement(1429447..1430085) Methylophaga frappieri 12842787 YP_006293245.1 CDS Q7C_1408 NC_017856.1 1430095 1431345 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; multi-sensor signal transduction histidine kinase complement(1430095..1431345) Methylophaga frappieri 12842788 YP_006293246.1 CDS Q7C_1409 NC_017856.1 1431525 1432169 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator complement(1431525..1432169) Methylophaga frappieri 12842789 YP_006293247.1 CDS Q7C_1410 NC_017856.1 1432156 1433877 R PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; methanol utilization control sensor protein moxY complement(1432156..1433877) Methylophaga frappieri 12842790 YP_006293248.1 CDS Q7C_1411 NC_017856.1 1433874 1434191 R PFAM: Sulphur oxidation protein SoxZ; Sulfur oxidation protein SoxZ complement(1433874..1434191) Methylophaga frappieri 12842791 YP_006293249.1 CDS Q7C_1412 NC_017856.1 1434191 1434679 R Sulfur oxidation protein SoxY complement(1434191..1434679) Methylophaga frappieri 12842792 YP_006293250.1 CDS Q7C_1413 NC_017856.1 1434676 1436124 R PFAM: Peptidase family M48; Exported zinc metalloprotease YfgC precursor complement(1434676..1436124) Methylophaga frappieri 12842793 YP_006293251.1 CDS Q7C_1414 NC_017856.1 1436238 1436474 D PFAM: SirA-like protein; Molybdopterin biosynthesis MoeB protein 1436238..1436474 Methylophaga frappieri 12842794 YP_006293252.1 CDS Q7C_1415 NC_017856.1 1436474 1436938 D NADH dehydrogenase 1436474..1436938 Methylophaga frappieri 12842795 YP_006293253.1 CDS Q7C_1416 NC_017856.1 1436959 1437585 D PFAM: Protein of unknown function (DUF502); hypothetical protein 1436959..1437585 Methylophaga frappieri 12842796 YP_006293254.1 CDS Q7C_1417 NC_017856.1 1438335 1439831 R hypothetical protein complement(1438335..1439831) Methylophaga frappieri 12842797 YP_006293255.1 CDS Q7C_1418 NC_017856.1 1439955 1440152 D TIGRFAM: DNA binding domain, excisionase family; transcriptional regulator 1439955..1440152 Methylophaga frappieri 12842798 YP_006293256.1 CDS Q7C_1419 NC_017856.1 1440306 1441067 D PFAM: Plasmid encoded RepA protein; plasmid encoded RepA protein 1440306..1441067 Methylophaga frappieri 12842799 YP_006293257.1 CDS Q7C_1420 NC_017856.1 1442513 1442680 D hypothetical protein 1442513..1442680 Methylophaga frappieri 12842800 YP_006293258.1 CDS Q7C_1421 NC_017856.1 1442762 1442953 D hypothetical protein 1442762..1442953 Methylophaga frappieri 12842801 YP_006293259.1 CDS Q7C_1422 NC_017856.1 1443584 1444183 D PFAM: Redoxin; Alkyl hydroperoxide reductase subunit C-like protein 1443584..1444183 Methylophaga frappieri 12842802 YP_006293260.1 CDS Q7C_1423 NC_017856.1 1444887 1445027 R hypothetical protein complement(1444887..1445027) Methylophaga frappieri 12842803 YP_006293261.1 CDS Q7C_1424 NC_017856.1 1445994 1446134 D hypothetical protein 1445994..1446134 Methylophaga frappieri 12842804 YP_006293262.1 CDS Q7C_1425 NC_017856.1 1446402 1446605 D hypothetical protein 1446402..1446605 Methylophaga frappieri 12842805 YP_006293263.1 CDS Q7C_1426 NC_017856.1 1446597 1446866 R hypothetical protein complement(1446597..1446866) Methylophaga frappieri 12842806 YP_006293264.1 CDS Q7C_1427 NC_017856.1 1446894 1447901 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; Inner membrane protein of type IV secretion of T-DNA complex, VirB6 complement(1446894..1447901) Methylophaga frappieri 12842807 YP_006293265.1 CDS Q7C_1428 NC_017856.1 1447916 1448131 R hypothetical protein complement(1447916..1448131) Methylophaga frappieri 12842808 YP_006293266.1 CDS Q7C_1429 NC_017856.1 1448148 1448867 R PFAM: Type IV secretion system proteins; TIGRFAM: P-type DNA transfer protein VirB5; Minor pilin of type IV secretion complex, VirB5 complement(1448148..1448867) Methylophaga frappieri 12842809 YP_006293267.1 CDS Q7C_1430 NC_017856.1 1449442 1449630 D PFAM: Phd_YefM; Phd_YefM 1449442..1449630 Methylophaga frappieri 12842863 YP_006293268.1 CDS Q7C_1431 NC_017856.1 1449846 1449989 D PFAM: Plasmid maintenance system killer protein; HigB toxin protein 1449846..1449989 Methylophaga frappieri 12842864 YP_006293269.1 CDS Q7C_1432 NC_017856.1 1449989 1450327 D PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; plasmid maintenance system antidote protein 1449989..1450327 Methylophaga frappieri 12842865 YP_006293270.1 CDS Q7C_1433 NC_017856.1 1450347 1450673 D PFAM: HicB family; HicB protein 1450347..1450673 Methylophaga frappieri 12842866 YP_006293271.1 CDS Q7C_1434 NC_017856.1 1450687 1451178 D hypothetical protein 1450687..1451178 Methylophaga frappieri 12842867 YP_006293272.1 CDS Q7C_1435 NC_017856.1 1451223 1451900 R hypothetical protein complement(1451223..1451900) Methylophaga frappieri 12842868 YP_006293273.1 CDS Q7C_1436 NC_017856.1 1452744 1453535 D PFAM: Divergent AAA domain; transcriptional regulator with HTH domain 1452744..1453535 Methylophaga frappieri 12842869 YP_006293274.1 CDS Q7C_1437 NC_017856.1 1453594 1454904 R hypothetical protein complement(1453594..1454904) Methylophaga frappieri 12842870 YP_006293275.1 CDS Q7C_1438 NC_017856.1 1455372 1456085 R PFAM: DNA methylase; Adenine-specific methyltransferase complement(1455372..1456085) Methylophaga frappieri 12842871 YP_006293276.1 CDS Q7C_1439 NC_017856.1 1456153 1457139 R PFAM: Phage integrase family; site-specific recombinase, phage integrase family complement(1456153..1457139) Methylophaga frappieri 12842872 YP_006293277.1 CDS Q7C_1441 NC_017856.1 1457376 1457741 R PFAM: CbiX; Sirohydrochlorin cobaltochelatase complement(1457376..1457741) Methylophaga frappieri 12842874 YP_006293278.1 CDS Q7C_1442 NC_017856.1 1457756 1459408 R PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family; Acetate permease ActP (cation/acetate symporter) complement(1457756..1459408) Methylophaga frappieri 12842875 YP_006293279.1 CDS Q7C_1443 NC_017856.1 1459405 1459719 R PFAM: Protein of unknown function, DUF485; membrane protein, clustering with ActP complement(1459405..1459719) Methylophaga frappieri 12842876 YP_006293280.1 CDS Q7C_1444 NC_017856.1 1459797 1459928 D hypothetical protein 1459797..1459928 Methylophaga frappieri 12842877 YP_006293281.1 CDS Q7C_1445 NC_017856.1 1459958 1461076 D PFAM: HD domain; Response regulator receiver domain; response regulator 1459958..1461076 Methylophaga frappieri 12842878 YP_006293282.1 CDS Q7C_1446 NC_017856.1 1461092 1463656 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; signal transduction histidine kinase 1461092..1463656 Methylophaga frappieri 12842879 YP_006293283.1 CDS Q7C_1447 NC_017856.1 1463636 1464514 R PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase complement(1463636..1464514) Methylophaga frappieri 12842880 YP_006293284.1 CDS Q7C_1448 NC_017856.1 1464667 1465659 R PFAM: Histone deacetylase domain; deacetylase complement(1464667..1465659) Methylophaga frappieri 12842881 YP_006293285.1 CDS Q7C_1449 NC_017856.1 1465695 1468220 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(1465695..1468220) Methylophaga frappieri 12842882 YP_006293286.1 CDS Q7C_1450 NC_017856.1 1468337 1469248 D PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; Cell division inhibitor 1468337..1469248 Methylophaga frappieri 12842883 YP_006293287.1 CDS Q7C_1451 NC_017856.1 1469258 1470271 D PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; Ferrochelatase, protoheme ferro-lyase 1469258..1470271 Methylophaga frappieri 12842884 YP_006293288.1 CDS Q7C_1452 NC_017856.1 1470273 1470761 R PFAM: FlgN protein; flagellar biosynthesis protein FlgN complement(1470273..1470761) Methylophaga frappieri 12842885 YP_006293289.1 CDS Q7C_1453 NC_017856.1 1470776 1471078 R PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; flagellar biosynthesis anti-sigma factor FlgM complement(1470776..1471078) Methylophaga frappieri 12842886 YP_006293290.1 CDS Q7C_1454 NC_017856.1 1471147 1471851 R PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagellar basal-body P-ring formation protein FlgA complement(1471147..1471851) Methylophaga frappieri 12842887 YP_006293291.1 CDS Q7C_1455 NC_017856.1 1471985 1473112 R hypothetical protein complement(1471985..1473112) Methylophaga frappieri 12842888 YP_006293292.1 CDS Q7C_1456 NC_017856.1 1473119 1475047 R PFAM: ABC-type uncharacterized transport system; gliding motility protein GldG complement(1473119..1475047) Methylophaga frappieri 12842889 YP_006293293.1 CDS Q7C_1457 NC_017856.1 1475058 1475798 R gliding motility protein GldF complement(1475058..1475798) Methylophaga frappieri 12842890 YP_006293294.1 CDS Q7C_1458 NC_017856.1 1475798 1476745 R PFAM: ABC transporter; ABC transporter ATP-binding protein complement(1475798..1476745) Methylophaga frappieri 12842891 YP_006293295.1 CDS Q7C_1459 NC_017856.1 1476944 1477993 D PFAM: Uncharacterized protein conserved in bacteria (DUF2333); hypothetical protein 1476944..1477993 Methylophaga frappieri 12842892 YP_006293296.1 CDS Q7C_1460 NC_017856.1 1478068 1479144 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdopterin biosynthesis protein MoeA/molybdate-binding domain-containing protein 1478068..1479144 Methylophaga frappieri 12842893 YP_006293297.1 CDS Q7C_1461 NC_017856.1 1479160 1479639 R PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; Molybdenum cofactor biosynthesis protein MoaC complement(1479160..1479639) Methylophaga frappieri 12842894 YP_006293298.1 CDS Q7C_1462 NC_017856.1 1479683 1479910 D PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 1479683..1479910 Methylophaga frappieri 12842895 YP_006293299.1 CDS Q7C_1463 NC_017856.1 1479912 1480346 D PFAM: MoaE protein; Molybdenum cofactor biosynthesis protein MoaE 1479912..1480346 Methylophaga frappieri 12842896 YP_006293300.1 CDS Q7C_1464 NC_017856.1 1480620 1481111 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; NAD-dependent formate dehydrogenase gamma subunit 1480620..1481111 Methylophaga frappieri 12842897 YP_006293301.1 CDS Q7C_1465 NC_017856.1 1481111 1482658 D PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NAD-dependent formate dehydrogenase subunit beta 1481111..1482658 Methylophaga frappieri 12842898 YP_006293302.1 CDS Q7C_1466 NC_017856.1 1482662 1485532 D PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase subunit alpha 1482662..1485532 Methylophaga frappieri 12842899 YP_006293303.1 CDS Q7C_1467 NC_017856.1 1485532 1486347 D PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D 1485532..1486347 Methylophaga frappieri 12842900 YP_006293304.1 CDS Q7C_1468 NC_017856.1 1486360 1486602 D PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD; NADH-dependent formate dehydrogenase delta subunit FdsD 1486360..1486602 Methylophaga frappieri 12842901 YP_006293305.1 CDS Q7C_1469 NC_017856.1 1486681 1488411 D PFAM: Major Facilitator Superfamily; major facilitator superfamily permease 1486681..1488411 Methylophaga frappieri 12842902 YP_006293306.1 CDS Q7C_1470 NC_017856.1 1488448 1489920 R PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase complement(1488448..1489920) Methylophaga frappieri 12842903 YP_006293307.1 CDS Q7C_1471 NC_017856.1 1489952 1490908 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: integron integrase; Integron integrase IntI4 complement(1489952..1490908) Methylophaga frappieri 12842904 YP_006293308.1 CDS Q7C_1472 NC_017856.1 1491101 1491412 D hypothetical protein 1491101..1491412 Methylophaga frappieri 12842905 YP_006293309.1 CDS Q7C_1473 NC_017856.1 1491668 1492573 D hypothetical protein 1491668..1492573 Methylophaga frappieri 12842906 YP_006293310.1 CDS Q7C_1474 NC_017856.1 1492655 1493473 D hypothetical protein 1492655..1493473 Methylophaga frappieri 12842907 YP_006293311.1 CDS Q7C_1475 NC_017856.1 1493592 1494266 D hypothetical protein 1493592..1494266 Methylophaga frappieri 12842908 YP_006293312.1 CDS Q7C_1476 NC_017856.1 1494357 1495154 D hypothetical protein 1494357..1495154 Methylophaga frappieri 12842909 YP_006293313.1 CDS Q7C_1477 NC_017856.1 1495244 1495381 R hypothetical protein complement(1495244..1495381) Methylophaga frappieri 12842910 YP_006293314.1 CDS Q7C_1478 NC_017856.1 1495527 1495748 R PFAM: Protein of unknown function (DUF3423); hypothetical protein complement(1495527..1495748) Methylophaga frappieri 12842911 YP_006293315.1 CDS Q7C_1479 NC_017856.1 1495751 1495909 R hypothetical protein complement(1495751..1495909) Methylophaga frappieri 12842912 YP_006293316.1 CDS Q7C_1480 NC_017856.1 1495950 1496603 D hypothetical protein 1495950..1496603 Methylophaga frappieri 12842913 YP_006293317.1 CDS Q7C_1481 NC_017856.1 1496584 1496706 D hypothetical protein 1496584..1496706 Methylophaga frappieri 12842914 YP_006293318.1 CDS Q7C_1482 NC_017856.1 1496703 1497425 D hypothetical protein 1496703..1497425 Methylophaga frappieri 12842915 YP_006293319.1 CDS Q7C_1483 NC_017856.1 1497535 1498335 D PFAM: TIR domain; TIR domain-containing protein 1497535..1498335 Methylophaga frappieri 12842916 YP_006293320.1 CDS Q7C_1484 NC_017856.1 1498844 1499089 D hypothetical protein 1498844..1499089 Methylophaga frappieri 12843000 YP_006293321.1 CDS Q7C_1485 NC_017856.1 1500317 1500853 D hypothetical protein 1500317..1500853 Methylophaga frappieri 12843001 YP_006293322.1 CDS Q7C_1486 NC_017856.1 1500947 1501192 R hypothetical protein complement(1500947..1501192) Methylophaga frappieri 12843002 YP_006293323.1 CDS Q7C_1487 NC_017856.1 1501167 1502381 D PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; Chromate transport protein ChrA 1501167..1502381 Methylophaga frappieri 12843003 YP_006293324.1 CDS Q7C_1488 NC_017856.1 1502507 1502683 R hypothetical protein complement(1502507..1502683) Methylophaga frappieri 12843004 YP_006293325.1 CDS Q7C_1489 NC_017856.1 1502722 1503111 D PFAM: Protein of unknown function (DUF419); Mll3428 protein 1502722..1503111 Methylophaga frappieri 12843005 YP_006293326.1 CDS Q7C_1490 NC_017856.1 1503245 1504291 D PFAM: Uncharacterized conserved protein (DUF2235); hypothetical protein 1503245..1504291 Methylophaga frappieri 12843006 YP_006293327.1 CDS Q7C_1491 NC_017856.1 1504308 1504946 R PFAM: short chain dehydrogenase; flavin reductase complement(1504308..1504946) Methylophaga frappieri 12843007 YP_006293328.1 CDS Q7C_1492 NC_017856.1 1504959 1505165 R PFAM: Helix-turn-helix; Cro/CI family transcriptional regulator complement(1504959..1505165) Methylophaga frappieri 12843008 YP_006293329.1 CDS Q7C_1493 NC_017856.1 1505162 1505539 R hypothetical protein complement(1505162..1505539) Methylophaga frappieri 12843009 YP_006293330.1 CDS Q7C_1494 NC_017856.1 1505735 1506028 D hypothetical protein 1505735..1506028 Methylophaga frappieri 12843010 YP_006293331.1 CDS Q7C_1495 NC_017856.1 1506139 1506654 D hypothetical protein 1506139..1506654 Methylophaga frappieri 12843011 YP_006293332.1 CDS Q7C_1496 NC_017856.1 1506712 1507125 D PFAM: Transcription elongation factor, GreA/GreB, C-term; Regulator of nucleoside diphosphate kinase 1506712..1507125 Methylophaga frappieri 12843012 YP_006293333.1 CDS Q7C_1497 NC_017856.1 1507226 1507492 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1507226..1507492 Methylophaga frappieri 12843013 YP_006293334.1 CDS Q7C_1498 NC_017856.1 1507550 1509589 R PFAM: Peptidase family M3; oligopeptidase A complement(1507550..1509589) Methylophaga frappieri 12843014 YP_006293335.1 CDS Q7C_1499 NC_017856.1 1509722 1510516 D UDP-2,3-diacylglucosamine hydrolase-like protein 1509722..1510516 Methylophaga frappieri 12843015 YP_006293336.1 CDS Q7C_1500 NC_017856.1 1510516 1511550 D PFAM: Glycosyl transferases group 1; glycosyltransferase 1510516..1511550 Methylophaga frappieri 12843016 YP_006293337.1 CDS Q7C_1501 NC_017856.1 1511501 1511638 R hypothetical protein complement(1511501..1511638) Methylophaga frappieri 12843017 YP_006293338.1 CDS Q7C_1502 NC_017856.1 1511688 1512416 D PFAM: VacJ like lipoprotein; Lipoprotein 1511688..1512416 Methylophaga frappieri 12843018 YP_006293339.1 CDS Q7C_1503 NC_017856.1 1512558 1513535 D PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; arabinose 5-phosphate isomerase 1512558..1513535 Methylophaga frappieri 12843019 YP_006293340.1 CDS Q7C_1504 NC_017856.1 1513549 1514070 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1513549..1514070 Methylophaga frappieri 12843020 YP_006293341.1 CDS Q7C_1505 NC_017856.1 1514054 1514635 D PFAM: Protein of unknown function (DUF1239); hypothetical protein 1514054..1514635 Methylophaga frappieri 12843021 YP_006293342.1 CDS Q7C_1506 NC_017856.1 1514616 1515404 D PFAM: OstA-like protein; Bacterial SH3 domain; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; LptA, protein essential for LPS transport across the periplasm 1514616..1515404 Methylophaga frappieri 12843022 YP_006293343.1 CDS Q7C_1507 NC_017856.1 1515410 1516135 D PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Lipopolysaccharide ABC transporter, ATP-binding protein LptB 1515410..1516135 Methylophaga frappieri 12843023 YP_006293344.1 CDS Q7C_1508 NC_017856.1 1516187 1518871 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1516187..1518871 Methylophaga frappieri 12843024 YP_006293345.1 CDS Q7C_1509 NC_017856.1 1518881 1520332 R PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit complement(1518881..1520332) Methylophaga frappieri 12843025 YP_006293346.1 CDS Q7C_1510 NC_017856.1 1520395 1521858 D PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; Inosine-5'-monophosphate dehydrogenase 1520395..1521858 Methylophaga frappieri 12843026 YP_006293347.1 CDS Q7C_1511 NC_017856.1 1521907 1523484 D PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 1521907..1523484 Methylophaga frappieri 12843027 YP_006293348.1 CDS Q7C_1512 NC_017856.1 1523612 1523761 R hypothetical protein complement(1523612..1523761) Methylophaga frappieri 12843028 YP_006293349.1 CDS Q7C_1513 NC_017856.1 1523793 1524989 D PFAM: Phage integrase family; Integrase 1523793..1524989 Methylophaga frappieri 12843029 YP_006293350.1 CDS Q7C_1514 NC_017856.1 1524973 1525158 R PFAM: Prophage CP4-57 regulatory protein (AlpA); transcriptional regulator complement(1524973..1525158) Methylophaga frappieri 12843030 YP_006293351.1 CDS Q7C_1515 NC_017856.1 1525465 1526139 R PFAM: Peptidase S24-like; Peptidase S24, S26A and S26B complement(1525465..1526139) Methylophaga frappieri 12843031 YP_006293352.1 CDS Q7C_1516 NC_017856.1 1526223 1526522 D hypothetical protein 1526223..1526522 Methylophaga frappieri 12843032 YP_006293353.1 CDS Q7C_1517 NC_017856.1 1526746 1528029 D TIGRFAM: integrating conjugative element, PFGI_1 class, ParB family protein; protein with ParB-like nuclease domain in PFGI-1-like cluster 1526746..1528029 Methylophaga frappieri 12843033 YP_006293354.1 CDS Q7C_1518 NC_017856.1 1528016 1528618 D PFAM: Protein of unknown function (DUF2857); hypothetical protein 1528016..1528618 Methylophaga frappieri 12843034 YP_006293355.1 CDS Q7C_1519 NC_017856.1 1528578 1529864 D FIG141751: hypothetical protein in PFGI-1-like cluster; hypothetical protein 1528578..1529864 Methylophaga frappieri 12843035 YP_006293356.1 CDS Q7C_1520 NC_017856.1 1530052 1530792 D PFAM: Domain of unknown function (DUF1845); TIGRFAM: integrating conjugative element protein, PFL_4669 family; integrating conjugative element protein 1530052..1530792 Methylophaga frappieri 12843036 YP_006293357.1 CDS Q7C_1521 NC_017856.1 1531226 1532332 D PFAM: StbA protein; bacterial StbA plasmid stability protein 1531226..1532332 Methylophaga frappieri 12843037 YP_006293358.1 CDS Q7C_1522 NC_017856.1 1532522 1532950 D PFAM: Protein of unknown function (DUF3577); hypothetical protein 1532522..1532950 Methylophaga frappieri 12843038 YP_006293359.1 CDS Q7C_1523 NC_017856.1 1533055 1533570 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1533055..1533570 Methylophaga frappieri 12843039 YP_006293360.1 CDS Q7C_1524 NC_017856.1 1533664 1534089 D hypothetical protein 1533664..1534089 Methylophaga frappieri 12843040 YP_006293361.1 CDS Q7C_1525 NC_017856.1 1534931 1535797 D integrase 1534931..1535797 Methylophaga frappieri 12843041 YP_006293362.1 CDS Q7C_1526 NC_017856.1 1535999 1536406 D TIGRFAM: conjugative transfer region protein, TIGR03748 family; PilL protein 1535999..1536406 Methylophaga frappieri 12843042 YP_006293363.1 CDS Q7C_1527 NC_017856.1 1536406 1536633 D hypothetical protein 1536406..1536633 Methylophaga frappieri 12843043 YP_006293364.1 CDS Q7C_1528 NC_017856.1 1536623 1537441 D TIGRFAM: integrating conjugative element protein, PFL_4693 family; hypothetical protein 1536623..1537441 Methylophaga frappieri 12843044 YP_006293365.1 CDS Q7C_1529 NC_017856.1 1537697 1538014 D PFAM: Transglycosylase SLT domain; secreted protein containing a transglycosylase S LT domain 1537697..1538014 Methylophaga frappieri 12843045 YP_006293366.1 CDS Q7C_1530 NC_017856.1 1538253 1538570 D PFAM: Protein of unknown function (DUF2859); TIGRFAM: integrating conjugative element protein, PFL_4695 family; integrating conjugative element protein 1538253..1538570 Methylophaga frappieri 12843046 YP_006293367.1 CDS Q7C_1531 NC_017856.1 1538582 1540696 D PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: conjugative coupling factor TraD, TOL family; conjugative coupling factor TraD, SXT/TOL subfamily; type IV secretory pathway, VirD4 components 1538582..1540696 Methylophaga frappieri 12843047 YP_006293368.1 CDS Q7C_1532 NC_017856.1 1540702 1541430 D TIGRFAM: integrating conjugative element membrane protein, PFL_4697 family; hypothetical protein 1540702..1541430 Methylophaga frappieri 12843048 YP_006293369.1 CDS Q7C_1533 NC_017856.1 1541529 1541930 D PFAM: Protein of unknown function (DUF2384); hypothetical protein 1541529..1541930 Methylophaga frappieri 12843049 YP_006293370.1 CDS Q7C_1534 NC_017856.1 1541927 1542619 D PFAM: RES domain; RES domain-containing protein 1541927..1542619 Methylophaga frappieri 12843050 YP_006293371.1 CDS Q7C_1535 NC_017856.1 1542625 1543215 D PFAM: Exonuclease; DNA polymerase III subunit epsilon 1542625..1543215 Methylophaga frappieri 12843051 YP_006293372.1 CDS Q7C_1536 NC_017856.1 1543310 1544656 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); reverse transcriptase 1543310..1544656 Methylophaga frappieri 12843052 YP_006293373.1 CDS Q7C_1537 NC_017856.1 1544649 1546718 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); reverse transcriptase 1544649..1546718 Methylophaga frappieri 12843053 YP_006293374.1 CDS Q7C_1538 NC_017856.1 1547050 1547352 D PFAM: Plasmid protein of unknown function (Plasmid_RAQPRD); TIGRFAM: integrative conjugative element protein, RAQPRD family; integrative conjugative element protein 1547050..1547352 Methylophaga frappieri 12843054 YP_006293375.1 CDS Q7C_1539 NC_017856.1 1547361 1547591 D PFAM: Protein of unknown function (DUF3262); TIGRFAM: integrating conjugative element protein, PFL_4701 family; integrating conjugative element protein 1547361..1547591 Methylophaga frappieri 12843055 YP_006293376.1 CDS Q7C_1540 NC_017856.1 1547703 1548080 D PFAM: Protein of unknown function (DUF2976); TIGRFAM: integrating conjugative element membrane protein, PFL_4702 family; integrating conjugative element membrane protein 1547703..1548080 Methylophaga frappieri 12843056 YP_006293377.1 CDS Q7C_1541 NC_017856.1 1548119 1548499 D PFAM: Protein of unknown function (DUF3487); TIGRFAM: conjugative transfer region protein, TIGR03750 family; conjugative transfer region protein 1548119..1548499 Methylophaga frappieri 12843057 YP_006293378.1 CDS Q7C_1542 NC_017856.1 1548471 1549148 D PFAM: Protein of unknown function (DUF2895); TIGRFAM: integrating conjugative element protein, PFL_4703 family; hypothetical protein 1548471..1549148 Methylophaga frappieri 12843058 YP_006293379.1 CDS Q7C_1543 NC_017856.1 1549145 1549966 D PFAM: Protein of unknown function (DUF3438); TIGRFAM: integrating conjugative element protein, PFL_4704 family; integrating conjugative element protein 1549145..1549966 Methylophaga frappieri 12843059 YP_006293380.1 CDS Q7C_1544 NC_017856.1 1549999 1551420 D TIGRFAM: integrating conjugative element protein, PFL_4705 family; integrating conjugative element protein 1549999..1551420 Methylophaga frappieri 12843060 YP_006293381.1 CDS Q7C_1545 NC_017856.1 1551482 1551823 D TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; lipoprotein 1551482..1551823 Methylophaga frappieri 12843061 YP_006293382.1 CDS Q7C_1546 NC_017856.1 1551833 1554556 D PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: conjugative transfer ATPase, PFL_4706 family; type IV secretory pathway, VirB4 components 1551833..1554556 Methylophaga frappieri 12843062 YP_006293383.1 CDS Q7C_1547 NC_017856.1 1554571 1555398 R PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; Zn-finger domain-containing protein (topoisomerase type I-like) complement(1554571..1555398) Methylophaga frappieri 12843063 YP_006293384.1 CDS Q7C_1548 NC_017856.1 1555813 1555998 D PFAM: Protein of unknown function (DUF1525); TIGRFAM: integrating conjugative element protein, PFL_4709 family; hypothetical protein 1555813..1555998 Methylophaga frappieri 12843064 YP_006293385.1 CDS Q7C_1549 NC_017856.1 1555995 1557020 D PFAM: TraU protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; integrating conjugative element protein 1555995..1557020 Methylophaga frappieri 12843065 YP_006293386.1 CDS Q7C_1550 NC_017856.1 1557017 1558357 D TIGRFAM: integrating conjugative element protein, PFL_4711 family; integrating conjugative element protein 1557017..1558357 Methylophaga frappieri 12843066 YP_006293387.1 CDS Q7C_1551 NC_017856.1 1558398 1558715 D hypothetical protein 1558398..1558715 Methylophaga frappieri 12843067 YP_006293388.1 CDS Q7C_1552 NC_017856.1 1558732 1560297 D PFAM: TraG-like protein, N-terminal region; TraG-like protein 1558732..1560297 Methylophaga frappieri 12843068 YP_006293389.1 CDS Q7C_1553 NC_017856.1 1560294 1560524 R hypothetical protein complement(1560294..1560524) Methylophaga frappieri 12843069 YP_006293390.1 CDS Q7C_1554 NC_017856.1 1560521 1560691 R ATPase (AAA+ superfamily) complement(1560521..1560691) Methylophaga frappieri 12843070 YP_006293391.1 CDS Q7C_1555 NC_017856.1 1560827 1562347 R hypothetical protein complement(1560827..1562347) Methylophaga frappieri 12843071 YP_006293392.1 CDS Q7C_1556 NC_017856.1 1562447 1562560 R hypothetical protein complement(1562447..1562560) Methylophaga frappieri 12843072 YP_006293393.1 CDS Q7C_1557 NC_017856.1 1562650 1562769 D hypothetical protein 1562650..1562769 Methylophaga frappieri 12843073 YP_006293394.1 CDS Q7C_1558 NC_017856.1 1562794 1563093 D hypothetical protein 1562794..1563093 Methylophaga frappieri 12843074 YP_006293395.1 CDS Q7C_1559 NC_017856.1 1563206 1564972 R hypothetical protein complement(1563206..1564972) Methylophaga frappieri 12843075 YP_006293396.1 CDS Q7C_1560 NC_017856.1 1565044 1565265 R hypothetical protein complement(1565044..1565265) Methylophaga frappieri 12843076 YP_006293397.1 CDS Q7C_1561 NC_017856.1 1565366 1566700 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; two-component, sensor histidine kinase complement(1565366..1566700) Methylophaga frappieri 12843077 YP_006293398.1 CDS Q7C_1562 NC_017856.1 1566763 1567461 R hypothetical protein complement(1566763..1567461) Methylophaga frappieri 12843078 YP_006293399.1 CDS Q7C_1563 NC_017856.1 1567700 1568428 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component response regulator 1567700..1568428 Methylophaga frappieri 12843079 YP_006293400.1 CDS Q7C_1564 NC_017856.1 1568443 1569222 D hypothetical protein 1568443..1569222 Methylophaga frappieri 12843080 YP_006293401.1 CDS Q7C_1565 NC_017856.1 1569243 1570451 D hypothetical protein 1569243..1570451 Methylophaga frappieri 12843081 YP_006293402.1 CDS Q7C_1566 NC_017856.1 1570453 1571229 D PFAM: Calcineurin-like phosphoesterase; phosphatase 1570453..1571229 Methylophaga frappieri 12844249 YP_006293403.1 CDS Q7C_1567 NC_017856.1 1571280 1573742 D hypothetical protein 1571280..1573742 Methylophaga frappieri 12844250 YP_006293404.1 CDS Q7C_1568 NC_017856.1 1573752 1573874 D hypothetical protein 1573752..1573874 Methylophaga frappieri 12844251 YP_006293405.1 CDS Q7C_1569 NC_017856.1 1573889 1574845 D PFAM: Sel1 repeat; Sel1 repeat protein 1573889..1574845 Methylophaga frappieri 12844252 YP_006293406.1 CDS Q7C_1570 NC_017856.1 1574852 1575712 R hypothetical protein complement(1574852..1575712) Methylophaga frappieri 12844253 YP_006293407.1 CDS Q7C_1571 NC_017856.1 1575865 1575999 D hypothetical protein 1575865..1575999 Methylophaga frappieri 12844254 YP_006293408.1 CDS Q7C_1572 NC_017856.1 1576943 1578403 D hypothetical protein 1576943..1578403 Methylophaga frappieri 12844255 YP_006293409.1 CDS Q7C_1573 NC_017856.1 1578589 1580058 D hypothetical protein 1578589..1580058 Methylophaga frappieri 12844256 YP_006293410.1 CDS Q7C_1574 NC_017856.1 1580207 1581202 D hypothetical protein 1580207..1581202 Methylophaga frappieri 12844257 YP_006293411.1 CDS Q7C_1575 NC_017856.1 1581612 1581956 R hypothetical protein complement(1581612..1581956) Methylophaga frappieri 12844258 YP_006293412.1 CDS Q7C_1576 NC_017856.1 1581970 1583403 R hypothetical protein complement(1581970..1583403) Methylophaga frappieri 12844259 YP_006293413.1 CDS Q7C_1577 NC_017856.1 1583413 1583643 R hypothetical protein complement(1583413..1583643) Methylophaga frappieri 12844260 YP_006293414.1 CDS Q7C_1578 NC_017856.1 1583888 1586107 R hypothetical protein complement(1583888..1586107) Methylophaga frappieri 12844261 YP_006293415.1 CDS Q7C_1579 NC_017856.1 1587232 1588719 R PFAM: Putative peptidoglycan binding domain; peptidoglycan binding protein complement(1587232..1588719) Methylophaga frappieri 12844262 YP_006293416.1 CDS Q7C_1580 NC_017856.1 1589072 1590280 D hypothetical protein 1589072..1590280 Methylophaga frappieri 12844263 YP_006293417.1 CDS Q7C_1581 NC_017856.1 1590301 1591191 D Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase 1590301..1591191 Methylophaga frappieri 12844264 YP_006293418.1 CDS Q7C_1582 NC_017856.1 1591343 1592902 D hypothetical protein 1591343..1592902 Methylophaga frappieri 12844265 YP_006293419.1 CDS Q7C_1583 NC_017856.1 1592915 1593109 R hypothetical protein complement(1592915..1593109) Methylophaga frappieri 12844266 YP_006293420.1 CDS Q7C_1584 NC_017856.1 1593372 1593743 R XRE family transcriptional regulator complement(1593372..1593743) Methylophaga frappieri 12844267 YP_006293421.1 CDS Q7C_1585 NC_017856.1 1593740 1593991 R PFAM: Plasmid stabilisation system protein; cytotoxic translational repressor of toxin-antitoxin stability system complement(1593740..1593991) Methylophaga frappieri 12844268 YP_006293422.1 CDS Q7C_1586 NC_017856.1 1594010 1594216 D hypothetical protein 1594010..1594216 Methylophaga frappieri 12844269 YP_006293423.1 CDS Q7C_1587 NC_017856.1 1594581 1595405 D PFAM: Sel1 repeat; Sel1 domain-containing protein repeat-containing protein 1594581..1595405 Methylophaga frappieri 12844270 YP_006293424.1 CDS Q7C_1588 NC_017856.1 1595438 1597738 D PFAM: EAL domain; Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1595438..1597738 Methylophaga frappieri 12844271 YP_006293425.1 CDS Q7C_1589 NC_017856.1 1597828 1598256 D hypothetical protein 1597828..1598256 Methylophaga frappieri 12844272 YP_006293426.1 CDS Q7C_1590 NC_017856.1 1598305 1599060 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein 1598305..1599060 Methylophaga frappieri 12844273 YP_006293427.1 CDS Q7C_1591 NC_017856.1 1599047 1599724 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; TC 3.A.1.8.1; Molybdenum transport system permease ModB 1599047..1599724 Methylophaga frappieri 12844274 YP_006293428.1 CDS Q7C_1592 NC_017856.1 1599721 1600785 D PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein; TC 3.A.1.8.1; Molybdenum transport ATP-binding protein ModC 1599721..1600785 Methylophaga frappieri 12844275 YP_006293429.1 CDS Q7C_1593 NC_017856.1 1600800 1601303 R PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; phosphohistidine phosphatase, SixA complement(1600800..1601303) Methylophaga frappieri 12844276 YP_006293430.1 CDS Q7C_1594 NC_017856.1 1601355 1602815 R PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating); 6-phosphogluconate dehydrogenase complement(1601355..1602815) Methylophaga frappieri 12844277 YP_006293431.1 CDS Q7C_1595 NC_017856.1 1602812 1603768 R PFAM: Nucleotidyltransferase domain; hypothetical protein complement(1602812..1603768) Methylophaga frappieri 12844278 YP_006293432.1 CDS Q7C_1596 NC_017856.1 1603803 1604633 R PepSY-associated TM helix family protein complement(1603803..1604633) Methylophaga frappieri 12844279 YP_006293433.1 CDS Q7C_1597 NC_017856.1 1604842 1605069 R hypothetical protein complement(1604842..1605069) Methylophaga frappieri 12844280 YP_006293434.1 CDS Q7C_1598 NC_017856.1 1605080 1605298 R hypothetical protein complement(1605080..1605298) Methylophaga frappieri 12844281 YP_006293435.1 CDS Q7C_1599 NC_017856.1 1605340 1605525 R hypothetical protein complement(1605340..1605525) Methylophaga frappieri 12844282 YP_006293436.1 CDS Q7C_1600 NC_017856.1 1605639 1606154 R PFAM: Outer membrane lipoprotein Slp family; outer membrane lipoprotein Slp complement(1605639..1606154) Methylophaga frappieri 12844283 YP_006293437.1 CDS Q7C_1601 NC_017856.1 1606207 1607130 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; 50S ribosomal subunit maturation GTPase RbgA complement(1606207..1607130) Methylophaga frappieri 12844284 YP_006293438.1 CDS Q7C_1602 NC_017856.1 1607317 1607709 D PFAM: Protein of unknown function (DUF454); hypothetical protein 1607317..1607709 Methylophaga frappieri 12844285 YP_006293439.1 CDS Q7C_1603 NC_017856.1 1607785 1608129 D PFAM: HopJ type III effector protein; type III effector HopPmaJ 1607785..1608129 Methylophaga frappieri 12844286 YP_006293440.1 CDS Q7C_1604 NC_017856.1 1608276 1609505 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-3-phosphoglycerate dehydrogenase 1608276..1609505 Methylophaga frappieri 12844287 YP_006293441.1 CDS Q7C_1605 NC_017856.1 1609553 1611253 R PFAM: D-lactate dehydrogenase, membrane binding; FAD binding domain; D-Lactate dehydrogenase complement(1609553..1611253) Methylophaga frappieri 12844288 YP_006293442.1 CDS Q7C_1606 NC_017856.1 1611368 1612165 D PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 1611368..1612165 Methylophaga frappieri 12844289 YP_006293443.1 CDS Q7C_1607 NC_017856.1 1612252 1612680 D PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 1612252..1612680 Methylophaga frappieri 12844290 YP_006293444.1 CDS Q7C_1608 NC_017856.1 1612692 1613081 D PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 1612692..1613081 Methylophaga frappieri 12844291 YP_006293445.1 CDS Q7C_1609 NC_017856.1 1613194 1613676 D PFAM: Lipid A 3-O-deacylase (PagL); Lipid A 3-O-deacylase (PagL) 1613194..1613676 Methylophaga frappieri 12844292 YP_006293446.1 CDS Q7C_1610 NC_017856.1 1613688 1614608 R PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; Lipid A biosynthesis lauroyl acyltransferase complement(1613688..1614608) Methylophaga frappieri 12844293 YP_006293447.1 CDS Q7C_1611 NC_017856.1 1614678 1615952 D PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); 3-deoxy-D-manno-octulosonic-acid transferase 1614678..1615952 Methylophaga frappieri 12844294 YP_006293448.1 CDS Q7C_1612 NC_017856.1 1615963 1616391 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; tRNA-specific adenosine-34 deaminase 1615963..1616391 Methylophaga frappieri 12844295 YP_006293449.1 CDS Q7C_1613 NC_017856.1 1616477 1617892 D PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; Slt family transglycosylase 1616477..1617892 Methylophaga frappieri 12844296 YP_006293450.1 CDS Q7C_1614 NC_017856.1 1617941 1618573 R PFAM: DSBA-like thioredoxin domain; Periplasmic thiol:disulfide interchange protein DsbA complement(1617941..1618573) Methylophaga frappieri 12844297 YP_006293451.1 CDS Q7C_1615 NC_017856.1 1618591 1619736 R PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; Cytochrome c-type biogenesis protein CcsA/ResC complement(1618591..1619736) Methylophaga frappieri 12844298 YP_006293452.1 CDS Q7C_1616 NC_017856.1 1619795 1621768 R PFAM: ResB-like family; Cytochrome c-type biogenesis protein Ccs1/ResB complement(1619795..1621768) Methylophaga frappieri 12844299 YP_006293453.1 CDS Q7C_1617 NC_017856.1 1621866 1622474 R PFAM: Cytochrome c; cytochrome c4 complement(1621866..1622474) Methylophaga frappieri 12844300 YP_006293454.1 CDS Q7C_1618 NC_017856.1 1622561 1623181 D PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; GTP-binding protein EngB 1622561..1623181 Methylophaga frappieri 12844301 YP_006293455.1 CDS Q7C_1619 NC_017856.1 1623262 1623450 D hypothetical protein 1623262..1623450 Methylophaga frappieri 12844302 YP_006293456.1 CDS Q7C_1620 NC_017856.1 1623599 1626103 D PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase 1623599..1626103 Methylophaga frappieri 12844303 YP_006293457.1 CDS Q7C_1622 NC_017856.1 1626479 1626865 R PFAM: Calcium/calmodulin dependent protein kinase II Association; hypothetical protein complement(1626479..1626865) Methylophaga frappieri 12844305 YP_006293458.1 CDS Q7C_1623 NC_017856.1 1627462 1630818 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; Bacterial signalling protein N terminal repeat; TIGRFAM: PAS domain S-box; hypothetical protein 1627462..1630818 Methylophaga frappieri 12844306 YP_006293459.1 CDS Q7C_1624 NC_017856.1 1630822 1631814 D PFAM: HD domain; Response regulator receiver domain; response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein 1630822..1631814 Methylophaga frappieri 12844307 YP_006293460.1 CDS Q7C_1625 NC_017856.1 1632131 1632763 D PFAM: Protein of unknown function (DUF2927); hypothetical protein 1632131..1632763 Methylophaga frappieri 12844308 YP_006293461.1 CDS Q7C_1626 NC_017856.1 1632819 1633664 R PFAM: OmpA family; Outer membrane protein A precursor complement(1632819..1633664) Methylophaga frappieri 12844309 YP_006293462.1 CDS Q7C_1627 NC_017856.1 1633826 1634971 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT complement(1633826..1634971) Methylophaga frappieri 12844310 YP_006293463.1 CDS Q7C_1628 NC_017856.1 1634984 1636021 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT complement(1634984..1636021) Methylophaga frappieri 12844311 YP_006293464.1 CDS Q7C_1629 NC_017856.1 1636104 1636799 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate protein 1636104..1636799 Methylophaga frappieri 12844312 YP_006293465.1 CDS Q7C_1630 NC_017856.1 1636840 1637676 D PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; Pyrroline-5-carboxylate reductase 1636840..1637676 Methylophaga frappieri 12844313 YP_006293466.1 CDS Q7C_1631 NC_017856.1 1637666 1638244 D PFAM: YGGT family; Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 1637666..1638244 Methylophaga frappieri 12844314 YP_006293467.1 CDS Q7C_1632 NC_017856.1 1638300 1639448 D PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine O-acetyltransferase 1638300..1639448 Methylophaga frappieri 12844315 YP_006293468.1 CDS Q7C_1633 NC_017856.1 1639448 1640050 D PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; homoserine O-acetyltransferase 1639448..1640050 Methylophaga frappieri 12844316 YP_006293469.1 CDS Q7C_1634 NC_017856.1 1640047 1640688 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1640047..1640688 Methylophaga frappieri 12844317 YP_006293470.1 CDS Q7C_1635 NC_017856.1 1640685 1641446 R PFAM: Sulfite exporter TauE/SafE; permease complement(1640685..1641446) Methylophaga frappieri 12844318 YP_006293471.1 CDS Q7C_1636 NC_017856.1 1641479 1642144 D hypothetical protein 1641479..1642144 Methylophaga frappieri 12844319 YP_006293472.1 CDS Q7C_1637 NC_017856.1 1642141 1643151 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(1642141..1643151) Methylophaga frappieri 12844320 YP_006293473.1 CDS Q7C_1638 NC_017856.1 1643196 1644497 R PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(1643196..1644497) Methylophaga frappieri 12844321 YP_006293474.1 CDS Q7C_1639 NC_017856.1 1644490 1645134 R PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit complement(1644490..1645134) Methylophaga frappieri 12844322 YP_006293475.1 CDS Q7C_1640 NC_017856.1 1645127 1646413 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1645127..1646413) Methylophaga frappieri 12844323 YP_006293476.1 CDS Q7C_1641 NC_017856.1 1646441 1646665 R PFAM: BolA-like protein; BolA superfamily transcriptional regulator complement(1646441..1646665) Methylophaga frappieri 12844324 YP_006293477.1 CDS Q7C_1642 NC_017856.1 1646668 1646967 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; NTP binding protein (contains STAS domain) complement(1646668..1646967) Methylophaga frappieri 12844325 YP_006293478.1 CDS Q7C_1643 NC_017856.1 1646964 1647602 R PFAM: Toluene tolerance, Ttg2; toluene tolerance protein complement(1646964..1647602) Methylophaga frappieri 12844326 YP_006293479.1 CDS Q7C_1644 NC_017856.1 1647605 1648069 R PFAM: mce related protein; ABC transporter complement(1647605..1648069) Methylophaga frappieri 12844327 YP_006293480.1 CDS Q7C_1645 NC_017856.1 1648073 1648849 R PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; ABC transporter, permease component YrbE complement(1648073..1648849) Methylophaga frappieri 12844328 YP_006293481.1 CDS Q7C_1646 NC_017856.1 1648846 1649652 R PFAM: ABC transporter; ABC transporter, ATP-binding protein YrbF complement(1648846..1649652) Methylophaga frappieri 12844329 YP_006293482.1 CDS Q7C_1647 NC_017856.1 1649866 1650429 D PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD gene product 1649866..1650429 Methylophaga frappieri 12844330 YP_006293483.1 CDS Q7C_1648 NC_017856.1 1650473 1651417 D PFAM: Cytochrome D1 heme domain; TIGRFAM: 40-residue YVTN family beta-propeller repeat; YVTN family beta-propeller domain-containing protein 1650473..1651417 Methylophaga frappieri 12844331 YP_006293484.1 CDS Q7C_1649 NC_017856.1 1651417 1652178 D PFAM: Protein of unknown function (DUF548); N6-adenine-specific methylase 1651417..1652178 Methylophaga frappieri 12844332 YP_006293485.1 CDS Q7C_1650 NC_017856.1 1652175 1653506 R PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase complement(1652175..1653506) Methylophaga frappieri 12844333 YP_006293486.1 CDS Q7C_1651 NC_017856.1 1653507 1654142 R PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; Outer membrane lipoprotein carrier protein LolA complement(1653507..1654142) Methylophaga frappieri 12844334 YP_006293487.1 CDS Q7C_1652 NC_017856.1 1654204 1656504 R PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK complement(1654204..1656504) Methylophaga frappieri 12844335 YP_006293488.1 CDS Q7C_1653 NC_017856.1 1656637 1657575 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 1656637..1657575 Methylophaga frappieri 12844336 YP_006293489.1 CDS Q7C_1654 NC_017856.1 1657625 1658068 D PFAM: Universal stress protein family; Universal stress protein 1657625..1658068 Methylophaga frappieri 12844337 YP_006293490.1 CDS Q7C_1655 NC_017856.1 1658075 1659331 D PFAM: Major Facilitator Superfamily; long-chain-fatty-acid--CoA ligase 1658075..1659331 Methylophaga frappieri 12844338 YP_006293491.1 CDS Q7C_1656 NC_017856.1 1659388 1660455 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1659388..1660455 Methylophaga frappieri 12844339 YP_006293492.1 CDS Q7C_1657 NC_017856.1 1660511 1661755 R PFAM: Peptidase family M48; hypothetical protein complement(1660511..1661755) Methylophaga frappieri 12844340 YP_006293493.1 CDS Q7C_1658 NC_017856.1 1661859 1662410 D PFAM: Exonuclease; 3'-to-5' oligoribonuclease 1661859..1662410 Methylophaga frappieri 12844341 YP_006293494.1 CDS Q7C_1659 NC_017856.1 1662631 1664094 D PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon 1662631..1664094 Methylophaga frappieri 12844342 YP_006293495.1 CDS Q7C_1660 NC_017856.1 1664101 1665630 D PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; alpha-deoxyribodipyrimidine photolyase-like protein 1664101..1665630 Methylophaga frappieri 12844343 YP_006293496.1 CDS Q7C_1661 NC_017856.1 1665640 1667037 D PFAM: FAD binding domain of DNA photolyase; DNA photolyase; Deoxyribodipyrimidine photolyase 1665640..1667037 Methylophaga frappieri 12844344 YP_006293497.1 CDS Q7C_1662 NC_017856.1 1667064 1667573 R PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin complement(1667064..1667573) Methylophaga frappieri 12844345 YP_006293498.1 CDS Q7C_1663 NC_017856.1 1667743 1668180 R hypothetical protein complement(1667743..1668180) Methylophaga frappieri 12844346 YP_006293499.1 CDS Q7C_1664 NC_017856.1 1668406 1670295 R PFAM: Bacterial protein of unknown function (DUF839); phosphatase complement(1668406..1670295) Methylophaga frappieri 12844347 YP_006293500.1 CDS Q7C_1665 NC_017856.1 1670365 1671435 R PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Epoxyqueuosine (oQ) reductase QueG complement(1670365..1671435) Methylophaga frappieri 12844348 YP_006293501.1 CDS Q7C_1666 NC_017856.1 1671481 1672971 D PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein 1671481..1672971 Methylophaga frappieri 12844349 YP_006293502.1 CDS Q7C_1667 NC_017856.1 1672971 1673426 D PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; ATPase 1672971..1673426 Methylophaga frappieri 12844350 YP_006293503.1 CDS Q7C_1668 NC_017856.1 1673527 1674858 D PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain; N-acetylmuramoyl-L-alanine amidase 1673527..1674858 Methylophaga frappieri 12844351 YP_006293504.1 CDS Q7C_1669 NC_017856.1 1674978 1676627 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 1674978..1676627 Methylophaga frappieri 12844352 YP_006293505.1 CDS Q7C_1670 NC_017856.1 1676653 1677768 D hypothetical protein 1676653..1677768 Methylophaga frappieri 12844353 YP_006293506.1 CDS Q7C_1671 NC_017856.1 1677826 1680945 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA complement(1677826..1680945) Methylophaga frappieri 12844354 YP_006293507.1 CDS Q7C_1672 NC_017856.1 1680993 1682069 R hypothetical protein complement(1680993..1682069) Methylophaga frappieri 12844355 YP_006293508.1 CDS Q7C_1674 NC_017856.1 1682636 1683826 D hypothetical protein 1682636..1683826 Methylophaga frappieri 12844357 YP_006293509.1 CDS Q7C_1675 NC_017856.1 1683963 1684595 D PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL 1683963..1684595 Methylophaga frappieri 12844358 YP_006293510.1 CDS Q7C_1676 NC_017856.1 1684599 1685588 R PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK complement(1684599..1685588) Methylophaga frappieri 12844359 YP_006293511.1 CDS Q7C_1677 NC_017856.1 1685600 1686442 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD superfamily sugar phosphatase complement(1685600..1686442) Methylophaga frappieri 12844360 YP_006293512.1 CDS Q7C_1678 NC_017856.1 1686426 1686632 R hypothetical protein complement(1686426..1686632) Methylophaga frappieri 12844361 YP_006293513.1 CDS Q7C_1679 NC_017856.1 1686639 1687280 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 1686639..1687280 Methylophaga frappieri 12844362 YP_006293514.1 CDS Q7C_1680 NC_017856.1 1687556 1687861 D hypothetical protein 1687556..1687861 Methylophaga frappieri 12844363 YP_006293515.1 CDS Q7C_1681 NC_017856.1 1688009 1688992 D PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase 1688009..1688992 Methylophaga frappieri 12844364 YP_006293516.1 CDS Q7C_1682 NC_017856.1 1689137 1689772 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 1689137..1689772 Methylophaga frappieri 12844365 YP_006293517.1 CDS Q7C_1683 NC_017856.1 1689797 1690330 D PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; 6-phospho 3-hexuloisomerase 1689797..1690330 Methylophaga frappieri 12844366 YP_006293518.1 CDS Q7C_1684 NC_017856.1 1690477 1691883 D PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 1690477..1691883 Methylophaga frappieri 12844367 YP_006293519.1 CDS Q7C_1685 NC_017856.1 1691880 1692806 D PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases; protein-N(5)-glutamine methyltransferase PrmB 1691880..1692806 Methylophaga frappieri 12844368 YP_006293520.1 CDS Q7C_1686 NC_017856.1 1692803 1694107 R PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; Pas complement(1692803..1694107) Methylophaga frappieri 12844369 YP_006293521.1 CDS Q7C_1687 NC_017856.1 1694152 1694871 R PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH; DNA mismatch repair endonuclease MutH complement(1694152..1694871) Methylophaga frappieri 12844370 YP_006293522.1 CDS Q7C_1688 NC_017856.1 1694894 1695817 D PFAM: ABC transporter; ATP-binding component of ABC transport system 1694894..1695817 Methylophaga frappieri 12844371 YP_006293523.1 CDS Q7C_1689 NC_017856.1 1695814 1696596 D PFAM: ABC-2 type transporter; multidrug ABC transporter permease 1695814..1696596 Methylophaga frappieri 12844372 YP_006293524.1 CDS Q7C_1690 NC_017856.1 1696600 1697577 R PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A; tRNA dihydrouridine synthase A complement(1696600..1697577) Methylophaga frappieri 12844373 YP_006293525.1 CDS Q7C_1691 NC_017856.1 1697633 1698343 D PFAM: Protein of unknown function DUF45; metal-dependent hydrolase 1697633..1698343 Methylophaga frappieri 12844374 YP_006293526.1 CDS Q7C_1692 NC_017856.1 1698563 1699726 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 1698563..1699726 Methylophaga frappieri 12844375 YP_006293527.1 CDS Q7C_1693 NC_017856.1 1699748 1701064 D PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase 1699748..1701064 Methylophaga frappieri 12844376 YP_006293528.1 CDS Q7C_1694 NC_017856.1 1701121 1701975 D PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 1701121..1701975 Methylophaga frappieri 12844377 YP_006293529.1 CDS Q7C_1695 NC_017856.1 1702151 1703569 D PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor RpoN 1702151..1703569 Methylophaga frappieri 12844378 YP_006293530.1 CDS Q7C_1696 NC_017856.1 1703604 1703930 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; Ribosome hibernation protein YhbH 1703604..1703930 Methylophaga frappieri 12844379 YP_006293531.1 CDS Q7C_1697 NC_017856.1 1703941 1704402 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system nitrogen-specific transporter subunit IIA PtsN 1703941..1704402 Methylophaga frappieri 12844380 YP_006293532.1 CDS Q7C_1698 NC_017856.1 1704407 1704889 D PFAM: HPr Serine kinase C-terminal domain; serine kinase of the HPr protein( ) 1704407..1704889 Methylophaga frappieri 12844381 YP_006293533.1 CDS Q7C_1699 NC_017856.1 1704988 1705392 D PFAM: PTS system fructose IIA component; PTS system fructose subfamily transporter subunit IIA 1704988..1705392 Methylophaga frappieri 12844382 YP_006293534.1 CDS Q7C_1700 NC_017856.1 1705389 1705658 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; Phosphocarrier protein, nitrogen regulation associated 1705389..1705658 Methylophaga frappieri 12844383 YP_006293535.1 CDS Q7C_1701 NC_017856.1 1705655 1707409 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system phosphoenolpyruvate-protein phosphotransferase 1705655..1707409 Methylophaga frappieri 12844384 YP_006293536.1 CDS Q7C_1702 NC_017856.1 1707495 1708853 D PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); Magnesium transporter 1707495..1708853 Methylophaga frappieri 12844385 YP_006293537.1 CDS Q7C_1703 NC_017856.1 1708875 1709966 D PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; Chorismate synthase 1708875..1709966 Methylophaga frappieri 12844386 YP_006293538.1 CDS Q7C_1704 NC_017856.1 1710073 1711137 D PFAM: Nucleoside H+ symporter; Nucleoside:H+ symporter:Major facilitator superfamily 1710073..1711137 Methylophaga frappieri 12844387 YP_006293539.1 CDS Q7C_1705 NC_017856.1 1711273 1712628 D PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A 1711273..1712628 Methylophaga frappieri 12844388 YP_006293540.1 CDS Q7C_1706 NC_017856.1 1712632 1713840 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; Na(+)-translocating NADH-quinone reductase subunit B 1712632..1713840 Methylophaga frappieri 12844389 YP_006293541.1 CDS Q7C_1707 NC_017856.1 1713884 1714669 D PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; Na(+)-translocating NADH-quinone reductase subunit C 1713884..1714669 Methylophaga frappieri 12844390 YP_006293542.1 CDS Q7C_1708 NC_017856.1 1714669 1715331 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit D 1714669..1715331 Methylophaga frappieri 12844391 YP_006293543.1 CDS Q7C_1709 NC_017856.1 1715332 1715940 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; Na(+)-translocating NADH-quinone reductase subunit E 1715332..1715940 Methylophaga frappieri 12844392 YP_006293544.1 CDS Q7C_1710 NC_017856.1 1715940 1717157 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; Na(+)-translocating NADH-quinone reductase subunit F 1715940..1717157 Methylophaga frappieri 12844393 YP_006293545.1 CDS Q7C_1711 NC_017856.1 1717158 1717355 D PFAM: Protein of unknown function (DUF539); exported or periplasmic protein in ApbE locus 1717158..1717355 Methylophaga frappieri 12844394 YP_006293546.1 CDS Q7C_1712 NC_017856.1 1717379 1717843 D PFAM: CBS domain; hypothetical protein 1717379..1717843 Methylophaga frappieri 12844395 YP_006293547.1 CDS Q7C_1713 NC_017856.1 1717945 1718901 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 1717945..1718901 Methylophaga frappieri 12844396 YP_006293548.1 CDS Q7C_1714 NC_017856.1 1719195 1719710 D PFAM: Peptidase S24-like; Error-prone repair protein UmuD 1719195..1719710 Methylophaga frappieri 12844397 YP_006293549.1 CDS Q7C_1715 NC_017856.1 1719712 1720998 D PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) 1719712..1720998 Methylophaga frappieri 12844398 YP_006293550.1 CDS Q7C_1716 NC_017856.1 1721071 1721379 D PFAM: Transposase; transposase IS3/IS911 1721071..1721379 Methylophaga frappieri 12844399 YP_006293551.1 CDS Q7C_1717 NC_017856.1 1721478 1721795 D ISPsy13, transposase OrfB 1721478..1721795 Methylophaga frappieri 12844400 YP_006293552.1 CDS Q7C_1724 NC_017856.1 1727803 1728474 R PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; queuosine biosynthesis protein QueC complement(1727803..1728474) Methylophaga frappieri 12844407 YP_006293553.1 CDS Q7C_1725 NC_017856.1 1728474 1729115 R PFAM: Radical SAM superfamily; queuosine biosynthesis radical SAM protein QueE complement(1728474..1729115) Methylophaga frappieri 12844408 YP_006293554.1 CDS Q7C_1726 NC_017856.1 1729135 1729950 R TIGRFAM: tol-pal system protein YbgF; hypothetical protein complement(1729135..1729950) Methylophaga frappieri 12844409 YP_006293555.1 CDS Q7C_1727 NC_017856.1 1729951 1730526 R PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; 18K peptidoglycan-associated outer membrane lipoprotein complement(1729951..1730526) Methylophaga frappieri 12844410 YP_006293556.1 CDS Q7C_1728 NC_017856.1 1730550 1731851 R PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; tolB protein precursor complement(1730550..1731851) Methylophaga frappieri 12844411 YP_006293557.1 CDS Q7C_1729 NC_017856.1 1731863 1733113 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TonB complement(1731863..1733113) Methylophaga frappieri 12844412 YP_006293558.1 CDS Q7C_1730 NC_017856.1 1733132 1733569 R PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; Tol biopolymer transport system, TolR protein complement(1733132..1733569) Methylophaga frappieri 12844413 YP_006293559.1 CDS Q7C_1731 NC_017856.1 1733584 1734252 R PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; MotA/TolQ/ExbB proton channel family protein complement(1733584..1734252) Methylophaga frappieri 12844414 YP_006293560.1 CDS Q7C_1732 NC_017856.1 1734242 1734559 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(1734242..1734559) Methylophaga frappieri 12844415 YP_006293561.1 CDS Q7C_1733 NC_017856.1 1734646 1735662 R PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase RuvB complement(1734646..1735662) Methylophaga frappieri 12844416 YP_006293562.1 CDS Q7C_1734 NC_017856.1 1735662 1736258 R PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase RuvA complement(1735662..1736258) Methylophaga frappieri 12844417 YP_006293563.1 CDS Q7C_1735 NC_017856.1 1736255 1736791 R PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease RuvC complement(1736255..1736791) Methylophaga frappieri 12844418 YP_006293564.1 CDS Q7C_1736 NC_017856.1 1736805 1737554 R PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; YebC/PmpR family DNA-binding regulatory protein complement(1736805..1737554) Methylophaga frappieri 12844419 YP_006293565.1 CDS Q7C_1737 NC_017856.1 1737582 1738511 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase complement(1737582..1738511) Methylophaga frappieri 12844420 YP_006293566.1 CDS Q7C_1738 NC_017856.1 1738543 1741347 R PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase complement(1738543..1741347) Methylophaga frappieri 12844421 YP_006293567.1 CDS Q7C_1739 NC_017856.1 1741362 1741475 R hypothetical protein complement(1741362..1741475) Methylophaga frappieri 12844422 YP_006293568.1 CDS Q7C_1740 NC_017856.1 1741519 1742139 D PFAM: Alternative oxidase; oxidase 1741519..1742139 Methylophaga frappieri 12844423 YP_006293569.1 CDS Q7C_1741 NC_017856.1 1742198 1742560 D hypothetical protein 1742198..1742560 Methylophaga frappieri 12844424 YP_006293570.1 CDS Q7C_1742 NC_017856.1 1743048 1744679 R PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; Heat shock protein 60 family chaperone GroEL complement(1743048..1744679) Methylophaga frappieri 12844425 YP_006293571.1 CDS Q7C_1743 NC_017856.1 1744743 1745033 R PFAM: Chaperonin 10 Kd subunit; Heat shock protein 60 family co-chaperone GroES complement(1744743..1745033) Methylophaga frappieri 12844426 YP_006293572.1 CDS Q7C_1744 NC_017856.1 1745145 1745594 R PFAM: FxsA cytoplasmic membrane protein; FxsA protein complement(1745145..1745594) Methylophaga frappieri 12844427 YP_006293573.1 CDS Q7C_1745 NC_017856.1 1745821 1747203 D PFAM: Phosphate-selective porin O and P; Phosphate-specific outer membrane porin OprP, Pyrophosphate-specific outer membrane porin OprO 1745821..1747203 Methylophaga frappieri 12844428 YP_006293574.1 CDS Q7C_1746 NC_017856.1 1747271 1749100 D PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1747271..1749100 Methylophaga frappieri 12844429 YP_006293575.1 CDS Q7C_1747 NC_017856.1 1749059 1749448 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); Arsenate reductase complement(1749059..1749448) Methylophaga frappieri 12844430 YP_006293576.1 CDS Q7C_1748 NC_017856.1 1749671 1750342 D PFAM: Bacterial SH3 domain; SH3 domain-containing protein 1749671..1750342 Methylophaga frappieri 12844431 YP_006293577.1 CDS Q7C_1749 NC_017856.1 1750369 1750887 R PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase-like protein complement(1750369..1750887) Methylophaga frappieri 12844432 YP_006293578.1 CDS Q7C_1750 NC_017856.1 1750884 1751282 R PFAM: ChuX-like family; TIGRFAM: putative heme utilization carrier protein HutX; heme iron utilization protein complement(1750884..1751282) Methylophaga frappieri 12844433 YP_006293579.1 CDS Q7C_1751 NC_017856.1 1751304 1753340 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent hemin , ferrichrome receptor complement(1751304..1753340) Methylophaga frappieri 12844434 YP_006293580.1 CDS Q7C_1752 NC_017856.1 1753489 1754334 D PFAM: Periplasmic binding protein; Periplasmic hemin-binding protein 1753489..1754334 Methylophaga frappieri 12844435 YP_006293581.1 CDS Q7C_1753 NC_017856.1 1754341 1755384 D PFAM: FecCD transport family; Hemin ABC transporter, permease protein 1754341..1755384 Methylophaga frappieri 12844436 YP_006293582.1 CDS Q7C_1754 NC_017856.1 1755387 1756154 D PFAM: ABC transporter; hemin ABC transporter ATPase 1755387..1756154 Methylophaga frappieri 12844437 YP_006293583.1 CDS Q7C_1755 NC_017856.1 1756180 1756842 D PFAM: ABC transporter transmembrane region; ATP-binding/permease fusion ABC transporter 1756180..1756842 Methylophaga frappieri 12844438 YP_006293584.1 CDS Q7C_1756 NC_017856.1 1756839 1757963 D PFAM: ABC transporter; Lipid A export ATP-binding/permease MsbA 1756839..1757963 Methylophaga frappieri 12844439 YP_006293585.1 CDS Q7C_1757 NC_017856.1 1757960 1759813 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Dihydroxy-acid dehydratase complement(1757960..1759813) Methylophaga frappieri 12844440 YP_006293586.1 CDS Q7C_1758 NC_017856.1 1759929 1761215 D PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase; N-acetylglutamate synthase 1759929..1761215 Methylophaga frappieri 12844441 YP_006293587.1 CDS Q7C_1759 NC_017856.1 1761208 1761738 R PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase complement(1761208..1761738) Methylophaga frappieri 12844442 YP_006293588.1 CDS Q7C_1760 NC_017856.1 1761783 1762508 D TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase 1761783..1762508 Methylophaga frappieri 12844443 YP_006293589.1 CDS Q7C_1761 NC_017856.1 1762558 1764000 D PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B 1762558..1764000 Methylophaga frappieri 12844444 YP_006293590.1 CDS Q7C_1762 NC_017856.1 1764185 1765327 D PFAM: FIST C domain; FIST N domain; hypothetical protein 1764185..1765327 Methylophaga frappieri 12844445 YP_006293591.1 CDS Q7C_1763 NC_017856.1 1765329 1766603 R PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family; glutamate--cysteine ligase , divergent, of Alpha- and Beta-proteobacteria type complement(1765329..1766603) Methylophaga frappieri 12844446 YP_006293592.1 CDS Q7C_1764 NC_017856.1 1766828 1767238 D PFAM: Response regulator receiver domain; twitching motility protein PilG 1766828..1767238 Methylophaga frappieri 12844447 YP_006293593.1 CDS Q7C_1765 NC_017856.1 1767242 1767607 D PFAM: Response regulator receiver domain; twitching motility protein PilH 1767242..1767607 Methylophaga frappieri 12844448 YP_006293594.1 CDS Q7C_1766 NC_017856.1 1767610 1768161 D PFAM: CheW-like domain; type IV pili signal transduction protein PilI 1767610..1768161 Methylophaga frappieri 12844449 YP_006293595.1 CDS Q7C_1767 NC_017856.1 1768183 1769445 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; type IV pilus biogenesis protein PilJ 1768183..1769445 Methylophaga frappieri 12844450 YP_006293596.1 CDS Q7C_1768 NC_017856.1 1769476 1775175 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 1769476..1775175 Methylophaga frappieri 12844451 YP_006293597.1 CDS Q7C_1769 NC_017856.1 1775175 1775642 D PFAM: CheW-like domain; CheW-like protein 1775175..1775642 Methylophaga frappieri 12844452 YP_006293598.1 CDS Q7C_1770 NC_017856.1 1775662 1777617 D PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 1775662..1777617 Methylophaga frappieri 12844453 YP_006293599.1 CDS Q7C_1771 NC_017856.1 1777624 1778850 D PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase 1777624..1778850 Methylophaga frappieri 12844454 YP_006293600.1 CDS Q7C_1772 NC_017856.1 1778917 1779897 D PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 1778917..1779897 Methylophaga frappieri 12844455 YP_006293601.1 CDS Q7C_1773 NC_017856.1 1779904 1780830 D PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; ribosomal protein S6 modification protein, putative 1779904..1780830 Methylophaga frappieri 12844456 YP_006293602.1 CDS Q7C_1774 NC_017856.1 1780820 1781698 D PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; Triphosphoribosyl-dephospho-CoA synthetase 1780820..1781698 Methylophaga frappieri 12844457 YP_006293603.1 CDS Q7C_1775 NC_017856.1 1781810 1782328 D PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme 1781810..1782328 Methylophaga frappieri 12844458 YP_006293604.1 CDS Q7C_1776 NC_017856.1 1782376 1783071 R PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; HisA/HisF family protein complement(1782376..1783071) Methylophaga frappieri 12844459 YP_006293605.1 CDS Q7C_1777 NC_017856.1 1783093 1784034 D PFAM: ATP-grasp domain; ATP-utilizing enzyme (ATP-grasp superfamily) 1783093..1784034 Methylophaga frappieri 12844460 YP_006293606.1 CDS Q7C_1778 NC_017856.1 1784031 1785053 D TIGRFAM: probable H4MPT-linked C1 transfer pathway protein; S-layer protein 1784031..1785053 Methylophaga frappieri 12844461 YP_006293607.1 CDS Q7C_1779 NC_017856.1 1785063 1786445 D PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; Para-aminobenzoate synthase, aminase component 1785063..1786445 Methylophaga frappieri 12844462 YP_006293608.1 CDS Q7C_1780 NC_017856.1 1786442 1787023 D PFAM: Amino acid kinase family; delta 1-pyrroline-5-carboxylate synthetase 1786442..1787023 Methylophaga frappieri 12844463 YP_006293609.1 CDS Q7C_1781 NC_017856.1 1787020 1788135 D PFAM: Pyridoxal-dependent decarboxylase conserved domain; PLP-dependent decarboxylase 1787020..1788135 Methylophaga frappieri 12844464 YP_006293610.1 CDS Q7C_1782 NC_017856.1 1788110 1789534 R PFAM: ATPase family associated with various cellular activities (AAA); sporulation domain-containing protein complement(1788110..1789534) Methylophaga frappieri 12844465 YP_006293611.1 CDS Q7C_1783 NC_017856.1 1789646 1790728 R PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(1789646..1790728) Methylophaga frappieri 12844466 YP_006293612.1 CDS Q7C_1784 NC_017856.1 1790725 1791258 R PFAM: Shikimate kinase; shikimate kinase complement(1790725..1791258) Methylophaga frappieri 12844467 YP_006293613.1 CDS Q7C_1785 NC_017856.1 1791355 1793472 R PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus biogenesis protein PilQ complement(1791355..1793472) Methylophaga frappieri 12844468 YP_006293614.1 CDS Q7C_1786 NC_017856.1 1793509 1794066 R PFAM: Pilus assembly protein, PilP; type IV pilus biogenesis protein PilP complement(1793509..1794066) Methylophaga frappieri 12844469 YP_006293615.1 CDS Q7C_1787 NC_017856.1 1794063 1794650 R PFAM: Pilus assembly protein, PilO; type IV pilus biogenesis protein PilO complement(1794063..1794650) Methylophaga frappieri 12844470 YP_006293616.1 CDS Q7C_1788 NC_017856.1 1794650 1795213 R PFAM: Fimbrial assembly protein (PilN); type IV pilus biogenesis protein PilN complement(1794650..1795213) Methylophaga frappieri 12844471 YP_006293617.1 CDS Q7C_1789 NC_017856.1 1795213 1796250 R PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus biogenesis protein PilM complement(1795213..1796250) Methylophaga frappieri 12844472 YP_006293618.1 CDS Q7C_1790 NC_017856.1 1796464 1798893 D PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; Multimodular transpeptidase-transglycosylase 1796464..1798893 Methylophaga frappieri 12844473 YP_006293619.1 CDS Q7C_1791 NC_017856.1 1798896 1800398 R PFAM: Peptidase family M48; Zn-dependent protease complement(1798896..1800398) Methylophaga frappieri 12844474 YP_006293620.1 CDS Q7C_1792 NC_017856.1 1800419 1800658 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(1800419..1800658) Methylophaga frappieri 12844475 YP_006293621.1 CDS Q7C_1793 NC_017856.1 1800729 1801322 R PFAM: Tellurite resistance protein TehB; type 12 methyltransferase complement(1800729..1801322) Methylophaga frappieri 12844476 YP_006293622.1 CDS Q7C_1794 NC_017856.1 1801327 1802778 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Potassium uptake protein TrkH complement(1801327..1802778) Methylophaga frappieri 12844477 YP_006293623.1 CDS Q7C_1795 NC_017856.1 1802786 1804297 R PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE complement(1802786..1804297) Methylophaga frappieri 12844478 YP_006293624.1 CDS Q7C_1796 NC_017856.1 1804297 1805166 R PFAM: CBS domain; Transporter associated domain; Magnesium and cobalt efflux protein CorC complement(1804297..1805166) Methylophaga frappieri 12844479 YP_006293625.1 CDS Q7C_1797 NC_017856.1 1805169 1805630 R PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metal-dependent hydrolase complement(1805169..1805630) Methylophaga frappieri 12844480 YP_006293626.1 CDS Q7C_1798 NC_017856.1 1805627 1806601 R PFAM: PhoH-like protein; Phosphate starvation-inducible ATPase PhoH with RNA binding motif complement(1805627..1806601) Methylophaga frappieri 12844481 YP_006293627.1 CDS Q7C_1799 NC_017856.1 1806622 1807962 R PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 methylthiotransferase complement(1806622..1807962) Methylophaga frappieri 12844482 YP_006293628.1 CDS Q7C_1800 NC_017856.1 1808246 1808566 R hypothetical protein complement(1808246..1808566) Methylophaga frappieri 12844483 YP_006293629.1 CDS Q7C_1801 NC_017856.1 1808576 1808875 R PFAM: Domain of unknown function (DUF1840); hypothetical protein complement(1808576..1808875) Methylophaga frappieri 12844484 YP_006293630.1 CDS Q7C_1802 NC_017856.1 1809001 1809675 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1809001..1809675 Methylophaga frappieri 12844485 YP_006293631.1 CDS Q7C_1803 NC_017856.1 1809672 1811231 R iron-regulated membrane protein complement(1809672..1811231) Methylophaga frappieri 12844486 YP_006293632.1 CDS Q7C_1804 NC_017856.1 1811228 1811488 R hypothetical protein complement(1811228..1811488) Methylophaga frappieri 12844487 YP_006293633.1 CDS Q7C_1805 NC_017856.1 1811478 1811804 R hypothetical protein complement(1811478..1811804) Methylophaga frappieri 12844488 YP_006293634.1 CDS Q7C_1806 NC_017856.1 1811901 1812734 R PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase complement(1811901..1812734) Methylophaga frappieri 12844489 YP_006293635.1 CDS Q7C_1807 NC_017856.1 1812803 1813735 R PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Response regulator of zinc sigma-54-dependent two-component system complement(1812803..1813735) Methylophaga frappieri 12844490 YP_006293636.1 CDS Q7C_1808 NC_017856.1 1813732 1814469 R hypothetical protein complement(1813732..1814469) Methylophaga frappieri 12844491 YP_006293637.1 CDS Q7C_1809 NC_017856.1 1814625 1816853 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1814625..1816853 Methylophaga frappieri 12844492 YP_006293638.1 CDS Q7C_1810 NC_017856.1 1816906 1818414 R PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; Exopolyphosphatase complement(1816906..1818414) Methylophaga frappieri 12844493 YP_006293639.1 CDS Q7C_1811 NC_017856.1 1818542 1819255 R PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; Phosphate transport system regulatory protein PhoU complement(1818542..1819255) Methylophaga frappieri 12844494 YP_006293640.1 CDS Q7C_1812 NC_017856.1 1819277 1820119 R PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; TC 3.A.1.7.1; phosphate transport ATP-binding protein PstB complement(1819277..1820119) Methylophaga frappieri 12844495 YP_006293641.1 CDS Q7C_1813 NC_017856.1 1820119 1821789 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; TC 3.A.1.7.1; phosphate ABC transporter permease complement(1820119..1821789) Methylophaga frappieri 12844496 YP_006293642.1 CDS Q7C_1814 NC_017856.1 1821801 1824062 R PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.7.1; phosphate ABC transporter permease complement(1821801..1824062) Methylophaga frappieri 12844497 YP_006293643.1 CDS Q7C_1815 NC_017856.1 1824229 1825185 R TIGRFAM: phosphate binding protein; phosphate ABC transporter substrate-binding protein complement(1824229..1825185) Methylophaga frappieri 12844498 YP_006293644.1 CDS Q7C_1816 NC_017856.1 1825331 1826620 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR; phosphate regulon sensor protein PhoR complement(1825331..1826620) Methylophaga frappieri 12844499 YP_006293645.1 CDS Q7C_1817 NC_017856.1 1826636 1827325 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein PhoB complement(1826636..1827325) Methylophaga frappieri 12844500 YP_006293646.1 CDS Q7C_1818 NC_017856.1 1827503 1829152 R PFAM: Phosphate transporter family; low-affinity inorganic phosphate transporter complement(1827503..1829152) Methylophaga frappieri 12844501 YP_006293647.1 CDS Q7C_1819 NC_017856.1 1829288 1831111 D PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase 1829288..1831111 Methylophaga frappieri 12844502 YP_006293648.1 CDS Q7C_1820 NC_017856.1 1831257 1831697 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 1831257..1831697 Methylophaga frappieri 12844503 YP_006293649.1 CDS Q7C_1821 NC_017856.1 1831701 1832162 D PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein 1831701..1832162 Methylophaga frappieri 12844504 YP_006293650.1 CDS Q7C_1822 NC_017856.1 1832216 1833556 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 1832216..1833556 Methylophaga frappieri 12844505 YP_006293651.1 CDS Q7C_1823 NC_017856.1 1833569 1834444 D PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1833569..1834444 Methylophaga frappieri 12844506 YP_006293652.1 CDS Q7C_1824 NC_017856.1 1834437 1835444 D PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA dihydrouridine synthase B 1834437..1835444 Methylophaga frappieri 12844507 YP_006293653.1 CDS Q7C_1825 NC_017856.1 1835441 1835731 D PFAM: Bacterial regulatory protein, Fis family; DNA-binding protein Fis 1835441..1835731 Methylophaga frappieri 12844508 YP_006293654.1 CDS Q7C_1826 NC_017856.1 1835763 1837322 D PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase 1835763..1837322 Methylophaga frappieri 12844509 YP_006293655.1 CDS Q7C_1827 NC_017856.1 1837453 1838481 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 1837453..1838481 Methylophaga frappieri 12844510 YP_006293656.1 CDS Q7C_1828 NC_017856.1 1838481 1839164 D hypothetical protein 1838481..1839164 Methylophaga frappieri 12844511 YP_006293657.1 CDS Q7C_1829 NC_017856.1 1839176 1839640 D PFAM: Protein of unknown function, DUF583; Integral membrane protein CcmA 1839176..1839640 Methylophaga frappieri 12844512 YP_006293658.1 CDS Q7C_1830 NC_017856.1 1839705 1840049 D PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron binding protein from the HesB_IscA_SufA family 1839705..1840049 Methylophaga frappieri 12844513 YP_006293659.1 CDS Q7C_1831 NC_017856.1 1840173 1841423 D PFAM: Predicted membrane protein (DUF2254); hypothetical protein 1840173..1841423 Methylophaga frappieri 12844514 YP_006293660.1 CDS Q7C_1832 NC_017856.1 1841608 1842558 D Transcriptional Regulator, AraC family 1841608..1842558 Methylophaga frappieri 12844515 YP_006293661.1 CDS Q7C_1833 NC_017856.1 1842592 1844733 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1842592..1844733 Methylophaga frappieri 12844516 YP_006293662.1 CDS Q7C_1834 NC_017856.1 1844735 1845919 D PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1844735..1845919 Methylophaga frappieri 12844517 YP_006293663.1 CDS Q7C_1835 NC_017856.1 1845937 1847181 D PFAM: Beta-lactamase; beta-lactamase 1845937..1847181 Methylophaga frappieri 12844518 YP_006293664.1 CDS Q7C_1836 NC_017856.1 1847326 1847934 D PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1847326..1847934 Methylophaga frappieri 12844519 YP_006293665.1 CDS Q7C_1837 NC_017856.1 1847931 1849091 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; multidrug/solvent RND membrane fusion protein 1847931..1849091 Methylophaga frappieri 12844520 YP_006293666.1 CDS Q7C_1838 NC_017856.1 1849094 1852240 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 1849094..1852240 Methylophaga frappieri 12844521 YP_006293667.1 CDS Q7C_1839 NC_017856.1 1852237 1853646 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC 1852237..1853646 Methylophaga frappieri 12844522 YP_006293668.1 CDS Q7C_1840 NC_017856.1 1853716 1853898 D hypothetical protein 1853716..1853898 Methylophaga frappieri 12844523 YP_006293669.1 CDS Q7C_1841 NC_017856.1 1853911 1854027 R hypothetical protein complement(1853911..1854027) Methylophaga frappieri 12844524 YP_006293670.1 CDS Q7C_1842 NC_017856.1 1854077 1856158 D PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT 1854077..1856158 Methylophaga frappieri 12844525 YP_006293671.1 CDS Q7C_1843 NC_017856.1 1856152 1857222 R porin complement(1856152..1857222) Methylophaga frappieri 12844526 YP_006293672.1 CDS Q7C_1844 NC_017856.1 1858217 1858591 R hypothetical protein complement(1858217..1858591) Methylophaga frappieri 12844527 YP_006293673.1 CDS Q7C_1845 NC_017856.1 1858731 1858979 R hypothetical protein complement(1858731..1858979) Methylophaga frappieri 12844528 YP_006293674.1 CDS Q7C_1846 NC_017856.1 1858999 1860162 R PFAM: Na+/Pi-cotransporter; Sodium-dependent phosphate transporter complement(1858999..1860162) Methylophaga frappieri 12844529 YP_006293675.1 CDS Q7C_1847 NC_017856.1 1860606 1861964 R PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; GTPase and tRNA-U34 5-formylation enzyme TrmE complement(1860606..1861964) Methylophaga frappieri 12844530 YP_006293676.1 CDS Q7C_1848 NC_017856.1 1861977 1863623 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; Inner membrane protein translocase component YidC, long form complement(1861977..1863623) Methylophaga frappieri 12844531 YP_006293677.1 CDS Q7C_1849 NC_017856.1 1863616 1863753 R PFAM: Domain of unknown function DUF37; protein YidD complement(1863616..1863753) Methylophaga frappieri 12844532 YP_006293678.1 CDS Q7C_1850 NC_017856.1 1863837 1864196 R PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; Ribonuclease P protein component complement(1863837..1864196) Methylophaga frappieri 12844533 YP_006293679.1 CDS Q7C_1851 NC_017856.1 1864222 1864356 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 complement(1864222..1864356) Methylophaga frappieri 12844534 YP_006293680.1 CDS Q7C_1852 NC_017856.1 1864406 1864576 R hypothetical protein complement(1864406..1864576) Methylophaga frappieri 12844535 YP_006293681.1 CDS Q7C_1853 NC_017856.1 1864627 1865976 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; Chromosomal replication initiator protein DnaA 1864627..1865976 Methylophaga frappieri 12844536 YP_006293682.1 CDS Q7C_1854 NC_017856.1 1865992 1867095 D PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 1865992..1867095 Methylophaga frappieri 12844537 YP_006293683.1 CDS Q7C_1855 NC_017856.1 1867150 1867776 R PFAM: YceI-like domain; YceI-like protein complement(1867150..1867776) Methylophaga frappieri 12844538 YP_006293684.1 CDS Q7C_1856 NC_017856.1 1867933 1869675 R PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; glutathione-regulated potassium-efflux system protein KefB complement(1867933..1869675) Methylophaga frappieri 12844539 YP_006293685.1 CDS Q7C_1857 NC_017856.1 1869699 1870886 R PFAM: HemY protein N-terminus; TIGRFAM: hemY protein; HemY-like protein complement(1869699..1870886) Methylophaga frappieri 12844540 YP_006293686.1 CDS Q7C_1858 NC_017856.1 1870883 1871914 R PFAM: HemX; uroporphyrinogen III complement(1870883..1871914) Methylophaga frappieri 12844541 YP_006293687.1 CDS Q7C_1859 NC_017856.1 1871889 1872656 R PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-III synthase complement(1871889..1872656) Methylophaga frappieri 12844542 YP_006293688.1 CDS Q7C_1860 NC_017856.1 1872646 1873575 R PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase complement(1872646..1873575) Methylophaga frappieri 12844543 YP_006293689.1 CDS Q7C_1861 NC_017856.1 1873658 1875094 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 1873658..1875094 Methylophaga frappieri 12844544 YP_006293690.1 CDS Q7C_1862 NC_017856.1 1875213 1877447 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(1875213..1877447) Methylophaga frappieri 12844545 YP_006293691.1 CDS Q7C_1863 NC_017856.1 1877707 1878363 R PFAM: 2OG-Fe(II) oxygenase superfamily; Iron-uptake factor PiuC complement(1877707..1878363) Methylophaga frappieri 12844546 YP_006293692.1 CDS Q7C_1864 NC_017856.1 1878429 1879241 D hypothetical protein 1878429..1879241 Methylophaga frappieri 12844547 YP_006293693.1 CDS Q7C_1865 NC_017856.1 1879298 1879423 R hypothetical protein complement(1879298..1879423) Methylophaga frappieri 12844548 YP_006293694.1 CDS Q7C_1866 NC_017856.1 1879600 1886787 D PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; Large exoproteins involved in heme utilization or adhesion 1879600..1886787 Methylophaga frappieri 12844549 YP_006293695.1 CDS Q7C_1867 NC_017856.1 1886815 1888443 D PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; activation/secretion signal peptide protein 1886815..1888443 Methylophaga frappieri 12844550 YP_006293696.1 CDS Q7C_1868 NC_017856.1 1888546 1888950 D PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Zn(II)-responsive transcriptional regulator; HTH-type transcriptional regulator zntR 1888546..1888950 Methylophaga frappieri 12844551 YP_006293697.1 CDS Q7C_1869 NC_017856.1 1888943 1890013 D PFAM: Predicted permease; transporter 1888943..1890013 Methylophaga frappieri 12844552 YP_006293698.1 CDS Q7C_1870 NC_017856.1 1890253 1892427 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; OMR family iron-siderophore receptor precursor complement(1890253..1892427) Methylophaga frappieri 12844553 YP_006293699.1 CDS Q7C_1871 NC_017856.1 1892531 1892977 R PFAM: Tellurite resistance protein TerB; hypothetical protein complement(1892531..1892977) Methylophaga frappieri 12844554 YP_006293700.1 CDS Q7C_1872 NC_017856.1 1893055 1894005 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator complement(1893055..1894005) Methylophaga frappieri 12844555 YP_006293701.1 CDS Q7C_1873 NC_017856.1 1893998 1897405 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Two-component hybrid sensor and regulator complement(1893998..1897405) Methylophaga frappieri 12844556 YP_006293702.1 CDS Q7C_1874 NC_017856.1 1897594 1898256 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG; urease accessory protein UreG complement(1897594..1898256) Methylophaga frappieri 12844557 YP_006293703.1 CDS Q7C_1875 NC_017856.1 1898222 1898857 R PFAM: UreF; urease accessory protein UreF complement(1898222..1898857) Methylophaga frappieri 12844558 YP_006293704.1 CDS Q7C_1876 NC_017856.1 1898899 1899390 R PFAM: UreE urease accessory protein, N-terminal domain; UreE urease accessory protein, C-terminal domain; Urease accessory protein UreE complement(1898899..1899390) Methylophaga frappieri 12844559 YP_006293705.1 CDS Q7C_1877 NC_017856.1 1899402 1901120 R PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; urease subunit alpha complement(1899402..1901120) Methylophaga frappieri 12844560 YP_006293706.1 CDS Q7C_1878 NC_017856.1 1901117 1901425 R PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit; urease subunit beta complement(1901117..1901425) Methylophaga frappieri 12844561 YP_006293707.1 CDS Q7C_1879 NC_017856.1 1901435 1901737 R PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit; urease subunit gamma complement(1901435..1901737) Methylophaga frappieri 12844562 YP_006293708.1 CDS Q7C_1880 NC_017856.1 1901757 1902638 R PFAM: UreD urease accessory protein; urease accessory protein UreD complement(1901757..1902638) Methylophaga frappieri 12844563 YP_006293709.1 CDS Q7C_1881 NC_017856.1 1902706 1903395 R PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; Urea ABC transporter, ATPase protein UrtE complement(1902706..1903395) Methylophaga frappieri 12844564 YP_006293710.1 CDS Q7C_1882 NC_017856.1 1903417 1904163 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; Urea ABC transporter, ATPase protein UrtD complement(1903417..1904163) Methylophaga frappieri 12844565 YP_006293711.1 CDS Q7C_1883 NC_017856.1 1904163 1905332 R PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; Urea ABC transporter, permease protein UrtC complement(1904163..1905332) Methylophaga frappieri 12844566 YP_006293712.1 CDS Q7C_1884 NC_017856.1 1905350 1906273 R PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; Urea ABC transporter, permease protein UrtB complement(1905350..1906273) Methylophaga frappieri 12844567 YP_006293713.1 CDS Q7C_1885 NC_017856.1 1906392 1907642 R TIGRFAM: urea ABC transporter, urea binding protein; Urea ABC transporter, substrate binding protein UrtA complement(1906392..1907642) Methylophaga frappieri 12844568 YP_006293714.1 CDS Q7C_1886 NC_017856.1 1907708 1908043 R PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; regulatory protein fmdB complement(1907708..1908043) Methylophaga frappieri 12844569 YP_006293715.1 CDS Q7C_1887 NC_017856.1 1908063 1909286 R PFAM: Acetamidase/Formamidase family; Formamidase complement(1908063..1909286) Methylophaga frappieri 12844570 YP_006293716.1 CDS Q7C_1888 NC_017856.1 1909330 1910466 R hypothetical protein complement(1909330..1910466) Methylophaga frappieri 12844571 YP_006293717.1 CDS Q7C_1889 NC_017856.1 1910660 1911157 D hypothetical protein 1910660..1911157 Methylophaga frappieri 12844572 YP_006293718.1 CDS Q7C_1890 NC_017856.1 1911159 1912283 R PFAM: Acetyltransferase (GNAT) family; Domain of unknown function (DUF3335); GNAT family acetyltransferase complement(1911159..1912283) Methylophaga frappieri 12844573 YP_006293719.1 CDS Q7C_1891 NC_017856.1 1912285 1913247 R PFAM: Protein of unknown function (DUF2817); deacylase complement(1912285..1913247) Methylophaga frappieri 12844574 YP_006293720.1 CDS Q7C_1892 NC_017856.1 1913315 1913509 R hypothetical protein complement(1913315..1913509) Methylophaga frappieri 12844575 YP_006293721.1 CDS Q7C_1893 NC_017856.1 1913498 1914982 D PFAM: RimK-like ATP-grasp domain; glutathione synthase/ribosomal protein S6 modification protein 1913498..1914982 Methylophaga frappieri 12844576 YP_006293722.1 CDS Q7C_1894 NC_017856.1 1915098 1916174 R PFAM: FecCD transport family; Vitamin B12 ABC transporter, permease component BtuC complement(1915098..1916174) Methylophaga frappieri 12844577 YP_006293723.1 CDS Q7C_1895 NC_017856.1 1916177 1917403 R PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF complement(1916177..1917403) Methylophaga frappieri 12844578 YP_006293724.1 CDS Q7C_1896 NC_017856.1 1917403 1918410 R PFAM: ABC transporter; ABC transporter-like protein complement(1917403..1918410) Methylophaga frappieri 12844579 YP_006293725.1 CDS Q7C_1897 NC_017856.1 1918410 1920548 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(1918410..1920548) Methylophaga frappieri 12844580 YP_006293726.1 CDS Q7C_1898 NC_017856.1 1920678 1922738 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor complement(1920678..1922738) Methylophaga frappieri 12844581 YP_006293727.1 CDS Q7C_1899 NC_017856.1 1922884 1923786 D PFAM: DnaJ C terminal region; DnaJ domain; DnaJ-class molecular chaperone CbpA 1922884..1923786 Methylophaga frappieri 12844582 YP_006293728.1 CDS Q7C_1900 NC_017856.1 1923798 1925171 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; HtrA protease/chaperone protein / Serine protease (Protease DO) 1923798..1925171 Methylophaga frappieri 12844583 YP_006293729.1 CDS Q7C_1901 NC_017856.1 1925281 1926624 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; NADP-specific glutamate dehydrogenase 1925281..1926624 Methylophaga frappieri 12844584 YP_006293730.1 CDS Q7C_1902 NC_017856.1 1926692 1927171 D PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 1926692..1927171 Methylophaga frappieri 12844585 YP_006293731.1 CDS Q7C_1903 NC_017856.1 1927259 1927615 R hypothetical protein complement(1927259..1927615) Methylophaga frappieri 12844586 YP_006293732.1 CDS Q7C_1904 NC_017856.1 1927643 1927936 R Transcriptional regulatory protein, ArsR family complement(1927643..1927936) Methylophaga frappieri 12844587 YP_006293733.1 CDS Q7C_1905 NC_017856.1 1928224 1928823 D PFAM: Exopolysaccharide synthesis, ExoD; exopolysaccharide synthesis, ExoD 1928224..1928823 Methylophaga frappieri 12844588 YP_006293734.1 CDS Q7C_1906 NC_017856.1 1929173 1929655 R PFAM: Cupin domain; cupin domain-containing protein complement(1929173..1929655) Methylophaga frappieri 12844589 YP_006293735.1 CDS Q7C_1907 NC_017856.1 1930040 1930174 D hypothetical protein 1930040..1930174 Methylophaga frappieri 12844590 YP_006293736.1 CDS Q7C_1908 NC_017856.1 1930349 1931092 R hypothetical protein complement(1930349..1931092) Methylophaga frappieri 12844591 YP_006293737.1 CDS Q7C_1909 NC_017856.1 1931058 1932422 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase complement(1931058..1932422) Methylophaga frappieri 12844592 YP_006293738.1 CDS Q7C_1910 NC_017856.1 1932456 1932602 D hypothetical protein 1932456..1932602 Methylophaga frappieri 12844593 YP_006293739.1 CDS Q7C_1911 NC_017856.1 1932561 1932983 R PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase subunit epsilon complement(1932561..1932983) Methylophaga frappieri 12844594 YP_006293740.1 CDS Q7C_1912 NC_017856.1 1933000 1934376 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase subunit beta complement(1933000..1934376) Methylophaga frappieri 12844595 YP_006293741.1 CDS Q7C_1913 NC_017856.1 1934430 1935296 R PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase subunit gamma complement(1934430..1935296) Methylophaga frappieri 12844596 YP_006293742.1 CDS Q7C_1914 NC_017856.1 1935311 1936852 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase subunit alpha complement(1935311..1936852) Methylophaga frappieri 12844597 YP_006293743.1 CDS Q7C_1915 NC_017856.1 1936878 1937408 R PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase subunit delta complement(1936878..1937408) Methylophaga frappieri 12844598 YP_006293744.1 CDS Q7C_1916 NC_017856.1 1937423 1937893 R PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase archaeal, H subunit; ATP synthase subunit B complement(1937423..1937893) Methylophaga frappieri 12844599 YP_006293745.1 CDS Q7C_1917 NC_017856.1 1937936 1938169 R PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase subunit C complement(1937936..1938169) Methylophaga frappieri 12844600 YP_006293746.1 CDS Q7C_1918 NC_017856.1 1938227 1939129 R PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase subunit A complement(1938227..1939129) Methylophaga frappieri 12844601 YP_006293747.1 CDS Q7C_1919 NC_017856.1 1939138 1939515 R PFAM: ATP synthase I chain; ATP synthase I subunit complement(1939138..1939515) Methylophaga frappieri 12844602 YP_006293748.1 CDS Q7C_1920 NC_017856.1 1939598 1940458 R PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J complement(1939598..1940458) Methylophaga frappieri 12844603 YP_006293749.1 CDS Q7C_1921 NC_017856.1 1940464 1941252 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj complement(1940464..1941252) Methylophaga frappieri 12844604 YP_006293750.1 CDS Q7C_1922 NC_017856.1 1941262 1941888 R PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; rRNA small subunit methyltransferase, glucose inhibited division protein GidB complement(1941262..1941888) Methylophaga frappieri 12844605 YP_006293751.1 CDS Q7C_1923 NC_017856.1 1941888 1943771 R PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(1941888..1943771) Methylophaga frappieri 12844606 YP_006293752.1 CDS Q7C_1924 NC_017856.1 1943913 1944269 D PFAM: Prokaryotic diacylglycerol kinase; Diacylglycerol kinase 1943913..1944269 Methylophaga frappieri 12844607 YP_006293753.1 CDS Q7C_1925 NC_017856.1 1944229 1945065 R PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(1944229..1945065) Methylophaga frappieri 12844608 YP_006293754.1 CDS Q7C_1926 NC_017856.1 1945087 1945200 R hypothetical protein complement(1945087..1945200) Methylophaga frappieri 12844609 YP_006293755.1 CDS Q7C_1927 NC_017856.1 1945327 1946034 D PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: hypothetical protein, proteobacterial; hypothetical protein 1945327..1946034 Methylophaga frappieri 12844610 YP_006293756.1 CDS Q7C_1928 NC_017856.1 1946097 1946435 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1946097..1946435 Methylophaga frappieri 12844611 YP_006293757.1 CDS Q7C_1929 NC_017856.1 1946454 1947692 D PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; Ammonium transporter 1946454..1947692 Methylophaga frappieri 12844612 YP_006293758.1 CDS Q7C_1930 NC_017856.1 1947819 1948886 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; Uroporphyrinogen III decarboxylase complement(1947819..1948886) Methylophaga frappieri 12844613 YP_006293759.1 CDS Q7C_1931 NC_017856.1 1948989 1949132 R hypothetical protein complement(1948989..1949132) Methylophaga frappieri 12843830 YP_006293760.1 CDS Q7C_1932 NC_017856.1 1949255 1949764 D PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 1949255..1949764 Methylophaga frappieri 12843831 YP_006293761.1 CDS Q7C_1933 NC_017856.1 1949761 1950891 D PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; Phosphoribosylaminoimidazole carboxylase ATPase subunit 1949761..1950891 Methylophaga frappieri 12843832 YP_006293762.1 CDS Q7C_1934 NC_017856.1 1950918 1951169 D PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; SelT/selW/selH selenoprotein 1950918..1951169 Methylophaga frappieri 12843833 YP_006293763.1 CDS Q7C_1935 NC_017856.1 1951267 1953549 R PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I complement(1951267..1953549) Methylophaga frappieri 12843834 YP_006293764.1 CDS Q7C_1936 NC_017856.1 1953632 1954099 R PFAM: Protein of unknown function (DUF494); hypothetical protein complement(1953632..1954099) Methylophaga frappieri 12843835 YP_006293765.1 CDS Q7C_1937 NC_017856.1 1954122 1955198 R PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; Rossmann fold nucleotide-binding protein Smf complement(1954122..1955198) Methylophaga frappieri 12843836 YP_006293766.1 CDS Q7C_1938 NC_017856.1 1955251 1956282 R PFAM: LysM domain; hypothetical protein complement(1955251..1956282) Methylophaga frappieri 12843837 YP_006293767.1 CDS Q7C_1939 NC_017856.1 1956554 1957057 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; Peptide deformylase 1956554..1957057 Methylophaga frappieri 12843838 YP_006293768.1 CDS Q7C_1940 NC_017856.1 1957067 1957996 D PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; Methionyl-tRNA formyltransferase 1957067..1957996 Methylophaga frappieri 12843839 YP_006293769.1 CDS Q7C_1941 NC_017856.1 1957989 1959296 D PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; Ribosomal RNA small subunit methyltransferase B 1957989..1959296 Methylophaga frappieri 12843840 YP_006293770.1 CDS Q7C_1942 NC_017856.1 1959262 1959861 D hypothetical protein 1959262..1959861 Methylophaga frappieri 12843841 YP_006293771.1 CDS Q7C_1943 NC_017856.1 1959846 1962002 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; nitrogen regulation protein ntrY 1959846..1962002 Methylophaga frappieri 12843842 YP_006293772.1 CDS Q7C_1944 NC_017856.1 1962005 1963279 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; nitrogen assimilation regulatory protein NtrX 1962005..1963279 Methylophaga frappieri 12843843 YP_006293773.1 CDS Q7C_1945 NC_017856.1 1963289 1964668 D PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 1963289..1964668 Methylophaga frappieri 12843844 YP_006293774.1 CDS Q7C_1946 NC_017856.1 1964668 1965228 D PFAM: Uncharacterized ACR, COG1678; hypothetical protein 1964668..1965228 Methylophaga frappieri 12843845 YP_006293775.1 CDS Q7C_1947 NC_017856.1 1965225 1965644 D PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; Holliday junction resolvase 1965225..1965644 Methylophaga frappieri 12843846 YP_006293776.1 CDS Q7C_1948 NC_017856.1 1965641 1966174 D PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase 1965641..1966174 Methylophaga frappieri 12843847 YP_006293777.1 CDS Q7C_1949 NC_017856.1 1966251 1967138 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 1966251..1967138 Methylophaga frappieri 12843848 YP_006293778.1 CDS Q7C_1950 NC_017856.1 1967135 1968409 D PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; Dihydroorotase 1967135..1968409 Methylophaga frappieri 12843849 YP_006293779.1 CDS Q7C_1951 NC_017856.1 1968420 1969202 D hypothetical protein 1968420..1969202 Methylophaga frappieri 12843850 YP_006293780.1 CDS Q7C_1953 NC_017856.1 1969435 1970250 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Blue (type 1) copper domain-containing protein complement(1969435..1970250) Methylophaga frappieri 12843852 YP_006293781.1 CDS Q7C_1954 NC_017856.1 1970407 1970736 R hypothetical protein complement(1970407..1970736) Methylophaga frappieri 12843853 YP_006293782.1 CDS Q7C_1955 NC_017856.1 1971177 1972277 R PFAM: Domain of unknown function DUF20; permease PerM (YfgO) complement(1971177..1972277) Methylophaga frappieri 12843854 YP_006293783.1 CDS Q7C_1956 NC_017856.1 1972359 1972472 R hypothetical protein complement(1972359..1972472) Methylophaga frappieri 12843855 YP_006293784.1 CDS Q7C_1957 NC_017856.1 1972425 1973510 D TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 1972425..1973510 Methylophaga frappieri 12843856 YP_006293785.1 CDS Q7C_1958 NC_017856.1 1973522 1976671 D PFAM: AcrB/AcrD/AcrF family; Acriflavin resistance protein 1973522..1976671 Methylophaga frappieri 12843857 YP_006293786.1 CDS Q7C_1959 NC_017856.1 1976696 1977097 R PFAM: MAPEG family; hypothetical protein complement(1976696..1977097) Methylophaga frappieri 12843858 YP_006293787.1 CDS Q7C_1960 NC_017856.1 1977169 1977381 R hypothetical protein complement(1977169..1977381) Methylophaga frappieri 12843859 YP_006293788.1 CDS Q7C_1961 NC_017856.1 1977423 1978436 R PFAM: Fructose-1-6-bisphosphatase; Fructose-1,6-bisphosphatase, type I complement(1977423..1978436) Methylophaga frappieri 12843860 YP_006293789.1 CDS Q7C_1962 NC_017856.1 1978467 1979285 R PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; Formylmethanofuran dehydrogenase subunit C complement(1978467..1979285) Methylophaga frappieri 12843861 YP_006293790.1 CDS Q7C_1963 NC_017856.1 1979282 1980184 R PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Formylmethanofuran--tetrahydromethanopterin N-formyltransferase complement(1979282..1980184) Methylophaga frappieri 12843862 YP_006293791.1 CDS Q7C_1964 NC_017856.1 1980181 1981848 R PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; Formylmethanofuran dehydrogenase subunit A complement(1980181..1981848) Methylophaga frappieri 12843863 YP_006293792.1 CDS Q7C_1965 NC_017856.1 1981851 1983131 R TIGRFAM: formylmethanofuran dehydrogenase subunit B; Formylmethanofuran dehydrogenase subunit B complement(1981851..1983131) Methylophaga frappieri 12843864 YP_006293793.1 CDS Q7C_1966 NC_017856.1 1983193 1983717 R PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; sporulation domain-containing protein complement(1983193..1983717) Methylophaga frappieri 12843865 YP_006293794.1 CDS Q7C_1967 NC_017856.1 1983783 1985540 R PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1983783..1985540) Methylophaga frappieri 12843866 YP_006293795.1 CDS Q7C_1968 NC_017856.1 1985631 1987697 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; Helicase PriA essential for oriC/DnaA-independent DNA replication complement(1985631..1987697) Methylophaga frappieri 12843867 YP_006293796.1 CDS Q7C_1969 NC_017856.1 1988005 1988139 D hypothetical protein 1988005..1988139 Methylophaga frappieri 12843868 YP_006293797.1 CDS Q7C_1970 NC_017856.1 1988150 1988650 D PFAM: Dihydrofolate reductase; Dihydrofolate reductase 1988150..1988650 Methylophaga frappieri 12843869 YP_006293798.1 CDS Q7C_1971 NC_017856.1 1988631 1988864 R PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein; DNA-binding protein inhibitor Id-2-like protein complement(1988631..1988864) Methylophaga frappieri 12843870 YP_006293799.1 CDS Q7C_1972 NC_017856.1 1988885 1991752 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(1988885..1991752) Methylophaga frappieri 12843871 YP_006293800.1 CDS Q7C_1973 NC_017856.1 1991754 1992710 R PFAM: NMT1/THI5 like; ABC-type nitrate/sulfonate/bicarbonate transport system protein complement(1991754..1992710) Methylophaga frappieri 12843872 YP_006293801.1 CDS Q7C_1974 NC_017856.1 1992876 1993124 D hypothetical protein 1992876..1993124 Methylophaga frappieri 12843873 YP_006293802.1 CDS Q7C_1975 NC_017856.1 1993128 1993481 D PFAM: Pentapeptide repeats (8 copies); Pentapeptide repeat domain-containing protein 1993128..1993481 Methylophaga frappieri 12843874 YP_006293803.1 CDS Q7C_1976 NC_017856.1 1993460 1994203 R PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; Twin-arginine translocation protein TatC complement(1993460..1994203) Methylophaga frappieri 12843875 YP_006293804.1 CDS Q7C_1977 NC_017856.1 1994196 1994483 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB; Twin-arginine translocation protein TatB complement(1994196..1994483) Methylophaga frappieri 12843876 YP_006293805.1 CDS Q7C_1978 NC_017856.1 1994490 1994735 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; Twin-arginine translocation protein TatA complement(1994490..1994735) Methylophaga frappieri 12843877 YP_006293806.1 CDS Q7C_1979 NC_017856.1 1994745 1995083 R PFAM: Scavenger mRNA decapping enzyme C-term binding; Histidine triad (HIT) protein complement(1994745..1995083) Methylophaga frappieri 12843878 YP_006293807.1 CDS Q7C_1980 NC_017856.1 1995080 1995400 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase complement(1995080..1995400) Methylophaga frappieri 12843879 YP_006293808.1 CDS Q7C_1981 NC_017856.1 1995397 1995780 R PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(1995397..1995780) Methylophaga frappieri 12843880 YP_006293809.1 CDS Q7C_1982 NC_017856.1 1995777 1996550 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(1995777..1996550) Methylophaga frappieri 12843881 YP_006293810.1 CDS Q7C_1983 NC_017856.1 1996550 1997299 R PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(1996550..1997299) Methylophaga frappieri 12843882 YP_006293811.1 CDS Q7C_1984 NC_017856.1 1997324 1997956 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Imidazole glycerol phosphate synthase amidotransferase subunit complement(1997324..1997956) Methylophaga frappieri 12843883 YP_006293812.1 CDS Q7C_1985 NC_017856.1 1997991 1998584 R PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(1997991..1998584) Methylophaga frappieri 12843884 YP_006293813.1 CDS Q7C_1986 NC_017856.1 1998550 1998675 D hypothetical protein 1998550..1998675 Methylophaga frappieri 12843885 YP_006293814.1 CDS Q7C_1987 NC_017856.1 1998684 1999433 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Fumarate and nitrate reduction regulatory protein 1998684..1999433 Methylophaga frappieri 12843886 YP_006293815.1 CDS Q7C_1988 NC_017856.1 1999519 2000193 D PFAM: OmpW family; OmpW family protein 1999519..2000193 Methylophaga frappieri 12843887 YP_006293816.1 CDS Q7C_1989 NC_017856.1 2000206 2001744 R PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; peptidoglycan lipid II flippase MurJ complement(2000206..2001744) Methylophaga frappieri 12843888 YP_006293817.1 CDS Q7C_1990 NC_017856.1 2001829 2001963 R hypothetical protein complement(2001829..2001963) Methylophaga frappieri 12843889 YP_006293818.1 CDS Q7C_1991 NC_017856.1 2001942 2002424 D hypothetical protein 2001942..2002424 Methylophaga frappieri 12843890 YP_006293819.1 CDS Q7C_1992 NC_017856.1 2002413 2003324 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Hydrogen peroxide-inducible genes activator complement(2002413..2003324) Methylophaga frappieri 12843891 YP_006293820.1 CDS Q7C_1993 NC_017856.1 2003433 2003597 D PFAM: Rubredoxin; Rubredoxin 2003433..2003597 Methylophaga frappieri 12843892 YP_006293821.1 CDS Q7C_1994 NC_017856.1 2003715 2004785 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA recombination and repair protein RecF 2003715..2004785 Methylophaga frappieri 12843893 YP_006293822.1 CDS Q7C_1995 NC_017856.1 2004869 2007289 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 2004869..2007289 Methylophaga frappieri 12843894 YP_006293823.1 CDS Q7C_1996 NC_017856.1 2007392 2008705 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase complement(2007392..2008705) Methylophaga frappieri 12843895 YP_006293824.1 CDS Q7C_1997 NC_017856.1 2008848 2009408 D PFAM: Flavoprotein; Archaeal flavoprotein 2008848..2009408 Methylophaga frappieri 12843896 YP_006293825.1 CDS Q7C_1998 NC_017856.1 2009401 2010957 D PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein; Dihydropteroate synthase-like protein 2009401..2010957 Methylophaga frappieri 12843897 YP_006293826.1 CDS Q7C_1999 NC_017856.1 2010945 2011523 D PFAM: Protein of unknown function (DUF447); hypothetical protein 2010945..2011523 Methylophaga frappieri 12843898 YP_006293827.1 CDS Q7C_2000 NC_017856.1 2011513 2012199 D PFAM: Protein of unknown function (DUF556); hypothetical protein 2011513..2012199 Methylophaga frappieri 12843899 YP_006293828.1 CDS Q7C_2001 NC_017856.1 2012352 2013125 D PFAM: ATP dependent DNA ligase domain; DNA ligase 2012352..2013125 Methylophaga frappieri 12843900 YP_006293829.1 CDS Q7C_2002 NC_017856.1 2013373 2014116 D hypothetical protein 2013373..2014116 Methylophaga frappieri 12843901 YP_006293830.1 CDS Q7C_2003 NC_017856.1 2014360 2016639 R PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(2014360..2016639) Methylophaga frappieri 12843902 YP_006293831.1 CDS Q7C_2004 NC_017856.1 2016844 2017641 R PFAM: Response regulator receiver domain; chemotaxis regulator complement(2016844..2017641) Methylophaga frappieri 12843903 YP_006293832.1 CDS Q7C_2005 NC_017856.1 2017656 2018207 R PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; hypothetical protein complement(2017656..2018207) Methylophaga frappieri 12843904 YP_006293833.1 CDS Q7C_2006 NC_017856.1 2018215 2019561 R PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Carboxyl-terminal protease complement(2018215..2019561) Methylophaga frappieri 12843905 YP_006293834.1 CDS Q7C_2007 NC_017856.1 2019583 2020674 R PFAM: Peptidase family M23; Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP complement(2019583..2020674) Methylophaga frappieri 12843906 YP_006293835.1 CDS Q7C_2008 NC_017856.1 2020730 2022265 R PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(2020730..2022265) Methylophaga frappieri 12843907 YP_006293836.1 CDS Q7C_2009 NC_017856.1 2022579 2022998 D PFAM: Rhodanese-like domain; Rhodanese-like sulfurtransferase 2022579..2022998 Methylophaga frappieri 12843908 YP_006293837.1 CDS Q7C_2010 NC_017856.1 2023012 2023263 D PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; glutaredoxin 2023012..2023263 Methylophaga frappieri 12843909 YP_006293838.1 CDS Q7C_2011 NC_017856.1 2023300 2023791 D PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; protein export cytoplasm chaperone protein 2023300..2023791 Methylophaga frappieri 12843910 YP_006293839.1 CDS Q7C_2012 NC_017856.1 2023813 2024841 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase 2023813..2024841 Methylophaga frappieri 12843911 YP_006293840.1 CDS Q7C_2013 NC_017856.1 2024881 2025756 D hypothetical protein 2024881..2025756 Methylophaga frappieri 12843912 YP_006293841.1 CDS Q7C_2014 NC_017856.1 2025796 2026965 R PFAM: Uncharacterized ACR, COG1565; hypothetical protein complement(2025796..2026965) Methylophaga frappieri 12843913 YP_006293842.1 CDS Q7C_2015 NC_017856.1 2026981 2027697 D PFAM: short chain dehydrogenase; FolM Alternative dihydrofolate reductase 1 2026981..2027697 Methylophaga frappieri 12843914 YP_006293843.1 CDS Q7C_2016 NC_017856.1 2028153 2028503 R PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; Dihydroneopterin aldolase complement(2028153..2028503) Methylophaga frappieri 12843915 YP_006293844.1 CDS Q7C_2017 NC_017856.1 2028545 2029174 D PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 2028545..2029174 Methylophaga frappieri 12843916 YP_006293845.1 CDS Q7C_2018 NC_017856.1 2029166 2030179 R PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA complement(2029166..2030179) Methylophaga frappieri 12843917 YP_006293846.1 CDS Q7C_2019 NC_017856.1 2030314 2030529 D PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 2030314..2030529 Methylophaga frappieri 12843918 YP_006293847.1 CDS Q7C_2020 NC_017856.1 2030547 2031008 D PFAM: Yqey-like protein; transamidase GatB domain-containing protein 2030547..2031008 Methylophaga frappieri 12843919 YP_006293848.1 CDS Q7C_2021 NC_017856.1 2031078 2032814 D PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase 2031078..2032814 Methylophaga frappieri 12843920 YP_006293849.1 CDS Q7C_2022 NC_017856.1 2032907 2034745 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma factor RpoD 2032907..2034745 Methylophaga frappieri 12843921 YP_006293850.1 CDS Q7C_2024 NC_017856.1 2034873 2035013 R hypothetical protein complement(2034873..2035013) Methylophaga frappieri 12843923 YP_006293851.1 CDS Q7C_2025 NC_017856.1 2035042 2035830 R PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin oxidoreductase( ) complement(2035042..2035830) Methylophaga frappieri 12843924 YP_006293852.1 CDS Q7C_2026 NC_017856.1 2035941 2036849 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Transcriptional activator MetR 2035941..2036849 Methylophaga frappieri 12843925 YP_006293853.1 CDS Q7C_2027 NC_017856.1 2037049 2038026 D PFAM: Domain of unknown function (DUF1852); hypothetical protein 2037049..2038026 Methylophaga frappieri 12843926 YP_006293854.1 CDS Q7C_2028 NC_017856.1 2038048 2039076 D PFAM: Cobalamin-independent synthase, Catalytic domain; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2038048..2039076 Methylophaga frappieri 12843927 YP_006293855.1 CDS Q7C_2029 NC_017856.1 2039162 2039992 D PFAM: Sulfite exporter TauE/SafE; permease 2039162..2039992 Methylophaga frappieri 12843928 YP_006293856.1 CDS Q7C_2030 NC_017856.1 2040153 2040461 R PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); Hexameric tyrosine-coordinated heme protein (HTHP) complement(2040153..2040461) Methylophaga frappieri 12843929 YP_006293857.1 CDS Q7C_2031 NC_017856.1 2040563 2040982 D PFAM: MarR family; Organic hydroperoxide resistance transcriptional regulator 2040563..2040982 Methylophaga frappieri 12843930 YP_006293858.1 CDS Q7C_2032 NC_017856.1 2041086 2041733 D PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase 2041086..2041733 Methylophaga frappieri 12843931 YP_006293859.1 CDS Q7C_2033 NC_017856.1 2041722 2043758 R PFAM: Site-specific recombinase; Site-specific recombinase complement(2041722..2043758) Methylophaga frappieri 12843932 YP_006293860.1 CDS Q7C_2034 NC_017856.1 2043861 2044268 R PFAM: Ankyrin repeat; ankyrin complement(2043861..2044268) Methylophaga frappieri 12843933 YP_006293861.1 CDS Q7C_2035 NC_017856.1 2044334 2044480 R PFAM: Entericidin EcnA/B family; small secreted protein complement(2044334..2044480) Methylophaga frappieri 12843934 YP_006293862.1 CDS Q7C_2036 NC_017856.1 2044794 2045243 D hypothetical protein 2044794..2045243 Methylophaga frappieri 12843935 YP_006293863.1 CDS Q7C_2037 NC_017856.1 2045249 2045797 D PFAM: OmpA family; Outer membrane protein A precursor 2045249..2045797 Methylophaga frappieri 12843936 YP_006293864.1 CDS Q7C_2038 NC_017856.1 2045810 2047213 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC 2045810..2047213 Methylophaga frappieri 12843937 YP_006293865.1 CDS Q7C_2039 NC_017856.1 2047375 2047869 D PFAM: Redoxin; Thiol peroxidase, Tpx-type 2047375..2047869 Methylophaga frappieri 12843938 YP_006293866.1 CDS Q7C_2040 NC_017856.1 2047937 2048578 D hypothetical protein 2047937..2048578 Methylophaga frappieri 12843939 YP_006293867.1 CDS Q7C_2041 NC_017856.1 2048575 2049297 R PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; CarD family transcriptional regulator complement(2048575..2049297) Methylophaga frappieri 12843940 YP_006293868.1 CDS Q7C_2042 NC_017856.1 2049432 2049596 R PFAM: Protein of unknown function (DUF1328); small integral membrane protein complement(2049432..2049596) Methylophaga frappieri 12843941 YP_006293869.1 CDS Q7C_2043 NC_017856.1 2049772 2049972 D hypothetical protein 2049772..2049972 Methylophaga frappieri 12843942 YP_006293870.1 CDS Q7C_2044 NC_017856.1 2050049 2050318 D PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 2050049..2050318 Methylophaga frappieri 12843943 YP_006293871.1 CDS Q7C_2045 NC_017856.1 2050334 2050777 D PFAM: Protein of unknown function (DUF1469); hypothetical protein 2050334..2050777 Methylophaga frappieri 12843944 YP_006293872.1 CDS Q7C_2046 NC_017856.1 2050845 2051201 D hypothetical protein 2050845..2051201 Methylophaga frappieri 12843945 YP_006293873.1 CDS Q7C_2047 NC_017856.1 2051212 2051403 D hypothetical protein 2051212..2051403 Methylophaga frappieri 12843946 YP_006293874.1 CDS Q7C_2048 NC_017856.1 2051514 2052869 D PFAM: Sodium:solute symporter family; Twin-arginine translocation pathway signal 2051514..2052869 Methylophaga frappieri 12843947 YP_006293875.1 CDS Q7C_2049 NC_017856.1 2052889 2053431 R PFAM: Lipocalin-like domain; lipoprotein Blc complement(2052889..2053431) Methylophaga frappieri 12843948 YP_006293876.1 CDS Q7C_2050 NC_017856.1 2053499 2053741 D hypothetical protein 2053499..2053741 Methylophaga frappieri 12843949 YP_006293877.1 CDS Q7C_2051 NC_017856.1 2053815 2053982 D hypothetical protein 2053815..2053982 Methylophaga frappieri 12843950 YP_006293878.1 CDS Q7C_2052 NC_017856.1 2054142 2054567 D hypothetical protein 2054142..2054567 Methylophaga frappieri 12843951 YP_006293879.1 CDS Q7C_2053 NC_017856.1 2054583 2054723 D hypothetical protein 2054583..2054723 Methylophaga frappieri 12843952 YP_006293880.1 CDS Q7C_2054 NC_017856.1 2054879 2058199 R PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(2054879..2058199) Methylophaga frappieri 12843953 YP_006293881.1 CDS Q7C_2055 NC_017856.1 2058196 2058348 R hypothetical protein complement(2058196..2058348) Methylophaga frappieri 12843954 YP_006293882.1 CDS Q7C_2056 NC_017856.1 2058464 2058589 R hypothetical protein complement(2058464..2058589) Methylophaga frappieri 12843955 YP_006293883.1 CDS Q7C_2057 NC_017856.1 2058704 2060344 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; hypothetical protein 2058704..2060344 Methylophaga frappieri 12843956 YP_006293884.1 CDS Q7C_2058 NC_017856.1 2060354 2061805 D PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 2060354..2061805 Methylophaga frappieri 12843957 YP_006293885.1 CDS Q7C_2059 NC_017856.1 2061863 2062333 R PFAM: Ferritin-like domain; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase complement(2061863..2062333) Methylophaga frappieri 12843958 YP_006293886.1 CDS Q7C_2060 NC_017856.1 2062571 2063746 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(2062571..2063746) Methylophaga frappieri 12843959 YP_006293887.1 CDS Q7C_2061 NC_017856.1 2063804 2064010 D hypothetical protein 2063804..2064010 Methylophaga frappieri 12843960 YP_006293888.1 CDS Q7C_2062 NC_017856.1 2064108 2064353 D PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 2064108..2064353 Methylophaga frappieri 12843961 YP_006293889.1 CDS Q7C_2063 NC_017856.1 2064416 2065018 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; DNA-binding response regulator 2064416..2065018 Methylophaga frappieri 12843962 YP_006293890.1 CDS Q7C_2064 NC_017856.1 2065015 2066352 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 2065015..2066352 Methylophaga frappieri 12843963 YP_006293891.1 CDS Q7C_2065 NC_017856.1 2066429 2066734 R PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein complement(2066429..2066734) Methylophaga frappieri 12843964 YP_006293892.1 CDS Q7C_2066 NC_017856.1 2066830 2066949 R hypothetical protein complement(2066830..2066949) Methylophaga frappieri 12843965 YP_006293893.1 CDS Q7C_2067 NC_017856.1 2067016 2067141 D hypothetical protein 2067016..2067141 Methylophaga frappieri 12843966 YP_006293894.1 CDS Q7C_2068 NC_017856.1 2067119 2067550 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR 2067119..2067550 Methylophaga frappieri 12843967 YP_006293895.1 CDS Q7C_2069 NC_017856.1 2067733 2070690 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 2067733..2070690 Methylophaga frappieri 12843968 YP_006293896.1 CDS Q7C_2070 NC_017856.1 2070690 2072855 D PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 2070690..2072855 Methylophaga frappieri 12843969 YP_006293897.1 CDS Q7C_2071 NC_017856.1 2072878 2074242 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; glutathione reductase 2072878..2074242 Methylophaga frappieri 12843970 YP_006293898.1 CDS Q7C_2072 NC_017856.1 2074598 2076727 D PFAM: SNARE associated Golgi protein; Phospholipase D Active site motif; phospholipase D 2074598..2076727 Methylophaga frappieri 12843971 YP_006293899.1 CDS Q7C_2073 NC_017856.1 2076727 2077419 D PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 2076727..2077419 Methylophaga frappieri 12843972 YP_006293900.1 CDS Q7C_2074 NC_017856.1 2077505 2078230 D PFAM: Proteasome subunit; proteasome-type protease 2077505..2078230 Methylophaga frappieri 12843973 YP_006293901.1 CDS Q7C_2075 NC_017856.1 2078217 2079221 R PFAM: Uncharacterized protein conserved in bacteria (DUF2248); hypothetical protein complement(2078217..2079221) Methylophaga frappieri 12843974 YP_006293902.1 CDS Q7C_2076 NC_017856.1 2079221 2080156 R PFAM: Bacterial domain of unknown function (DUF403); hypothetical protein complement(2079221..2080156) Methylophaga frappieri 12843975 YP_006293903.1 CDS Q7C_2077 NC_017856.1 2080156 2081619 R PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407); hypothetical protein complement(2080156..2081619) Methylophaga frappieri 12843976 YP_006293904.1 CDS Q7C_2078 NC_017856.1 2081699 2083495 R PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate carboxyl transferase subunit B complement(2081699..2083495) Methylophaga frappieri 12843977 YP_006293905.1 CDS Q7C_2079 NC_017856.1 2083525 2084940 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; Pyruvate carboxyl transferase subunit A complement(2083525..2084940) Methylophaga frappieri 12843978 YP_006293906.1 CDS Q7C_2080 NC_017856.1 2085052 2086020 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 2085052..2086020 Methylophaga frappieri 12843979 YP_006293907.1 CDS Q7C_2081 NC_017856.1 2086017 2087312 R PFAM: Major Facilitator Superfamily; inner membrane protein complement(2086017..2087312) Methylophaga frappieri 12843980 YP_006293908.1 CDS Q7C_2082 NC_017856.1 2087326 2088270 R PFAM: Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Aldo/keto reductase precursor complement(2087326..2088270) Methylophaga frappieri 12843981 YP_006293909.1 CDS Q7C_2083 NC_017856.1 2088471 2089334 D PFAM: HDOD domain; signal transduction protein 2088471..2089334 Methylophaga frappieri 12843982 YP_006293910.1 CDS Q7C_2084 NC_017856.1 2089393 2090103 R PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B complement(2089393..2090103) Methylophaga frappieri 12843983 YP_006293911.1 CDS Q7C_2085 NC_017856.1 2090090 2091715 R PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Multicopper oxidase complement(2090090..2091715) Methylophaga frappieri 12843984 YP_006293912.1 CDS Q7C_2086 NC_017856.1 2092316 2093917 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; two-component system response regulator-like protein 2092316..2093917 Methylophaga frappieri 12843985 YP_006293913.1 CDS Q7C_2087 NC_017856.1 2093932 2094045 D hypothetical protein 2093932..2094045 Methylophaga frappieri 12843986 YP_006293914.1 CDS Q7C_2088 NC_017856.1 2094061 2094672 R PFAM: Predicted membrane protein (DUF2238); hypothetical protein complement(2094061..2094672) Methylophaga frappieri 12843987 YP_006293915.1 CDS Q7C_2090 NC_017856.1 2095104 2096396 D PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Phosphoribosylamine--glycine ligase 2095104..2096396 Methylophaga frappieri 12843989 YP_006293916.1 CDS Q7C_2091 NC_017856.1 2096421 2097290 D PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase 2096421..2097290 Methylophaga frappieri 12843990 YP_006293917.1 CDS Q7C_2092 NC_017856.1 2097313 2097876 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC family protein 2097313..2097876 Methylophaga frappieri 12843991 YP_006293918.1 CDS Q7C_2093 NC_017856.1 2097873 2098787 D PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase, aerobic 2097873..2098787 Methylophaga frappieri 12843992 YP_006293919.1 CDS Q7C_2094 NC_017856.1 2098791 2099879 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 complement(2098791..2099879) Methylophaga frappieri 12843993 YP_006293920.1 CDS Q7C_2095 NC_017856.1 2099883 2101142 R PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(2099883..2101142) Methylophaga frappieri 12843994 YP_006293921.1 CDS Q7C_2096 NC_017856.1 2101266 2103032 D PFAM: Tetratricopeptide repeat; hypothetical protein 2101266..2103032 Methylophaga frappieri 12843995 YP_006293922.1 CDS Q7C_2097 NC_017856.1 2103029 2103628 D PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; Outer membrane lipoprotein LolB 2103029..2103628 Methylophaga frappieri 12843996 YP_006293923.1 CDS Q7C_2098 NC_017856.1 2103625 2104482 D PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2103625..2104482 Methylophaga frappieri 12843997 YP_006293924.1 CDS Q7C_2100 NC_017856.1 2104607 2105593 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2104607..2105593 Methylophaga frappieri 12843999 YP_006293925.1 CDS Q7C_2101 NC_017856.1 2105699 2106385 D PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 2105699..2106385 Methylophaga frappieri 12844000 YP_006293926.1 CDS Q7C_2102 NC_017856.1 2106409 2106984 D PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2106409..2106984 Methylophaga frappieri 12844001 YP_006293927.1 CDS Q7C_2103 NC_017856.1 2106994 2108085 D PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding and nucleic acid-binding protein YchF 2106994..2108085 Methylophaga frappieri 12844002 YP_006293928.1 CDS Q7C_2104 NC_017856.1 2108145 2109218 D PFAM: Phospholipase A1; Phospholipase A1 precursor, Outer membrane phospholipase A 2108145..2109218 Methylophaga frappieri 12844003 YP_006293929.1 CDS Q7C_2106 NC_017856.1 2109856 2110197 D PFAM: Bacterial regulatory protein, arsR family; Arsenical resistance operon repressor 2109856..2110197 Methylophaga frappieri 12844005 YP_006293930.1 CDS Q7C_2107 NC_017856.1 2110214 2110729 D PFAM: Dual specificity phosphatase, catalytic domain; phosphatase family protein 2110214..2110729 Methylophaga frappieri 12844006 YP_006293931.1 CDS Q7C_2108 NC_017856.1 2110719 2111732 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2110719..2111732 Methylophaga frappieri 12844007 YP_006293932.1 CDS Q7C_2109 NC_017856.1 2111738 2112961 D PFAM: Major Facilitator Superfamily; Permease of the major facilitator superfamily 2111738..2112961 Methylophaga frappieri 12844008 YP_006293933.1 CDS Q7C_2110 NC_017856.1 2113033 2113365 D PFAM: Uncharacterised BCR, YnfA/UPF0060 family; hypothetical protein 2113033..2113365 Methylophaga frappieri 12844009 YP_006293934.1 CDS Q7C_2111 NC_017856.1 2113394 2114257 D PFAM: Mechanosensitive ion channel; hypothetical protein 2113394..2114257 Methylophaga frappieri 12844010 YP_006293935.1 CDS Q7C_2112 NC_017856.1 2114330 2114728 D PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 2114330..2114728 Methylophaga frappieri 12844011 YP_006293936.1 CDS Q7C_2113 NC_017856.1 2114734 2115162 R hypothetical protein complement(2114734..2115162) Methylophaga frappieri 12844012 YP_006293937.1 CDS Q7C_2114 NC_017856.1 2115159 2115719 R hypothetical protein complement(2115159..2115719) Methylophaga frappieri 12844013 YP_006293938.1 CDS Q7C_2115 NC_017856.1 2115697 2116092 R hypothetical protein complement(2115697..2116092) Methylophaga frappieri 12844014 YP_006293939.1 CDS Q7C_2116 NC_017856.1 2116188 2117162 R MxaL protein complement(2116188..2117162) Methylophaga frappieri 12844015 YP_006293940.1 CDS Q7C_2117 NC_017856.1 2117189 2117758 R MxaK protein complement(2117189..2117758) Methylophaga frappieri 12844016 YP_006293941.1 CDS Q7C_2118 NC_017856.1 2117755 2118735 R PFAM: von Willebrand factor type A domain; MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase complement(2117755..2118735) Methylophaga frappieri 12844017 YP_006293942.1 CDS Q7C_2119 NC_017856.1 2118732 2119667 R MxaA protein complement(2118732..2119667) Methylophaga frappieri 12844018 YP_006293943.1 CDS Q7C_2120 NC_017856.1 2119669 2120505 R hypothetical protein complement(2119669..2120505) Methylophaga frappieri 12844019 YP_006293944.1 CDS Q7C_2121 NC_017856.1 2120502 2121536 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(2120502..2121536) Methylophaga frappieri 12844020 YP_006293945.1 CDS Q7C_2122 NC_017856.1 2121597 2121872 R PFAM: Methanol dehydrogenase beta subunit; Methanol dehydrogenase, small subunit complement(2121597..2121872) Methylophaga frappieri 12844021 YP_006293946.1 CDS Q7C_2123 NC_017856.1 2121969 2122556 R PFAM: Cytochrome c; TIGRFAM: cytochrome c(L), periplasmic; cytochrome c, class I complement(2121969..2122556) Methylophaga frappieri 12844022 YP_006293947.1 CDS Q7C_2124 NC_017856.1 2122595 2123458 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: methanol oxidation system protein MoxJ; MxaJ, protein involved in methanol oxidation complement(2122595..2123458) Methylophaga frappieri 12844023 YP_006293948.1 CDS Q7C_2125 NC_017856.1 2123554 2125443 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein complement(2123554..2125443) Methylophaga frappieri 12844024 YP_006293949.1 CDS Q7C_2126 NC_017856.1 2125626 2126282 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; nitrate/nitrite response regulator protein complement(2125626..2126282) Methylophaga frappieri 12844025 YP_006293950.1 CDS Q7C_2127 NC_017856.1 2126299 2127216 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific complement(2126299..2127216) Methylophaga frappieri 12844026 YP_006293951.1 CDS Q7C_2128 NC_017856.1 2127360 2127485 D hypothetical protein 2127360..2127485 Methylophaga frappieri 12844027 YP_006293952.1 CDS Q7C_2129 NC_017856.1 2127501 2127818 D hypothetical protein 2127501..2127818 Methylophaga frappieri 12844028 YP_006293953.1 CDS Q7C_2130 NC_017856.1 2127843 2128361 D PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD protein 2127843..2128361 Methylophaga frappieri 12844029 YP_006293954.1 CDS Q7C_2131 NC_017856.1 2128345 2129298 D TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein 2128345..2129298 Methylophaga frappieri 12844030 YP_006293955.1 CDS Q7C_2132 NC_017856.1 2129317 2129790 R PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA (cytosine34-2'-O-)-methyltransferase complement(2129317..2129790) Methylophaga frappieri 12844031 YP_006293956.1 CDS Q7C_2133 NC_017856.1 2129792 2131357 R PFAM: Transglycosylase SLT domain; LysM domain; membrane-bound lytic murein transglycosylase D complement(2129792..2131357) Methylophaga frappieri 12844032 YP_006293957.1 CDS Q7C_2134 NC_017856.1 2131602 2132426 D PFAM: Protein of unknown function (DUF2797); hypothetical protein 2131602..2132426 Methylophaga frappieri 12844033 YP_006293958.1 CDS Q7C_2135 NC_017856.1 2132423 2133451 D PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; Dihydroorotate dehydrogenase 2132423..2133451 Methylophaga frappieri 12844034 YP_006293959.1 CDS Q7C_2136 NC_017856.1 2133453 2134295 D PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 2133453..2134295 Methylophaga frappieri 12844035 YP_006293960.1 CDS Q7C_2137 NC_017856.1 2134304 2135095 R PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; Hydroxyacylglutathione hydrolase complement(2134304..2135095) Methylophaga frappieri 12844036 YP_006293961.1 CDS Q7C_2138 NC_017856.1 2135094 2135801 D PFAM: Methyltransferase domain; SAM-dependent methyltransferase 2135094..2135801 Methylophaga frappieri 12844037 YP_006293962.1 CDS Q7C_2139 NC_017856.1 2135803 2136222 D PFAM: RNase H; Ribonuclease HI 2135803..2136222 Methylophaga frappieri 12844038 YP_006293963.1 CDS Q7C_2140 NC_017856.1 2136225 2136959 D PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III subunit epsilon 2136225..2136959 Methylophaga frappieri 12844039 YP_006293964.1 CDS Q7C_2141 NC_017856.1 2136951 2137064 R hypothetical protein complement(2136951..2137064) Methylophaga frappieri 12844040 YP_006293965.1 CDS Q7C_2142 NC_017856.1 2137087 2137620 D PFAM: GrpE; Heat shock protein GrpE 2137087..2137620 Methylophaga frappieri 12844041 YP_006293966.1 CDS Q7C_2143 NC_017856.1 2137577 2137699 D hypothetical protein 2137577..2137699 Methylophaga frappieri 12844042 YP_006293967.1 CDS Q7C_2144 NC_017856.1 2137727 2139646 D PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Chaperone protein DnaK 2137727..2139646 Methylophaga frappieri 12844043 YP_006293968.1 CDS Q7C_2145 NC_017856.1 2139726 2140841 D PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; Chaperone protein DnaJ 2139726..2140841 Methylophaga frappieri 12844044 YP_006293969.1 CDS Q7C_2146 NC_017856.1 2140927 2141736 D PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; Dihydrodipicolinate reductase 2140927..2141736 Methylophaga frappieri 12844045 YP_006293970.1 CDS Q7C_2147 NC_017856.1 2141742 2142302 R hypothetical protein complement(2141742..2142302) Methylophaga frappieri 12844046 YP_006293971.1 CDS Q7C_2148 NC_017856.1 2142302 2144638 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; penicillin-binding protein, 1A family; Multimodular transpeptidase-transglycosylase complement(2142302..2144638) Methylophaga frappieri 12844047 YP_006293972.1 CDS Q7C_2149 NC_017856.1 2144757 2144903 R hypothetical protein complement(2144757..2144903) Methylophaga frappieri 12844048 YP_006293973.1 CDS Q7C_2150 NC_017856.1 2144998 2145468 D PFAM: AhpC/TSA family; Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein 2144998..2145468 Methylophaga frappieri 12844049 YP_006293974.1 CDS Q7C_2151 NC_017856.1 2145495 2147483 D PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase 2145495..2147483 Methylophaga frappieri 12844050 YP_006293975.1 CDS Q7C_2152 NC_017856.1 2147634 2148632 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2147634..2148632 Methylophaga frappieri 12844051 YP_006293976.1 CDS Q7C_2153 NC_017856.1 2148690 2149952 D PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 2148690..2149952 Methylophaga frappieri 12844052 YP_006293977.1 CDS Q7C_2154 NC_017856.1 2149970 2151412 D PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 2149970..2151412 Methylophaga frappieri 12844053 YP_006293978.1 CDS Q7C_2155 NC_017856.1 2151446 2152489 D PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Fructose-bisphosphate aldolase class II 2151446..2152489 Methylophaga frappieri 12844054 YP_006293979.1 CDS Q7C_2156 NC_017856.1 2152641 2153015 D PFAM: CrcB-like protein; TIGRFAM: protein CrcB; CrcB protein 2152641..2153015 Methylophaga frappieri 12844055 YP_006293980.1 CDS Q7C_2157 NC_017856.1 2153012 2153308 D PFAM: Uncharacterized ACR, COG1993; hypothetical protein 2153012..2153308 Methylophaga frappieri 12844056 YP_006293981.1 CDS Q7C_2158 NC_017856.1 2153321 2154595 D PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 2153321..2154595 Methylophaga frappieri 12844057 YP_006293982.1 CDS Q7C_2159 NC_017856.1 2154588 2155280 D PFAM: Peptidase family M50; membrane metalloprotease 2154588..2155280 Methylophaga frappieri 12844058 YP_006293983.1 CDS Q7C_2160 NC_017856.1 2155305 2156483 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 2155305..2156483 Methylophaga frappieri 12844059 YP_006293984.1 CDS Q7C_2161 NC_017856.1 2156516 2157532 R PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(2156516..2157532) Methylophaga frappieri 12844060 YP_006293985.1 CDS Q7C_2162 NC_017856.1 2157765 2158682 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Ribosomal large subunit pseudouridine synthase B 2157765..2158682 Methylophaga frappieri 12844061 YP_006293986.1 CDS Q7C_2163 NC_017856.1 2158679 2159596 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator complement(2158679..2159596) Methylophaga frappieri 12844062 YP_006293987.1 CDS Q7C_2164 NC_017856.1 2159688 2160431 R PFAM: short chain dehydrogenase; short-chain dehydrogenase complement(2159688..2160431) Methylophaga frappieri 12844063 YP_006293988.1 CDS Q7C_2165 NC_017856.1 2160445 2160816 R hypothetical protein complement(2160445..2160816) Methylophaga frappieri 12844064 YP_006293989.1 CDS Q7C_2166 NC_017856.1 2160887 2162173 R PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase; Phytoene desaturase, pro-zeta-carotene producing complement(2160887..2162173) Methylophaga frappieri 12844065 YP_006293990.1 CDS Q7C_2167 NC_017856.1 2162185 2163021 R PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; phytoene synthase complement(2162185..2163021) Methylophaga frappieri 12844066 YP_006293991.1 CDS Q7C_2168 NC_017856.1 2163063 2164031 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(2163063..2164031) Methylophaga frappieri 12844067 YP_006293992.1 CDS Q7C_2169 NC_017856.1 2164190 2164501 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 2164190..2164501 Methylophaga frappieri 12844068 YP_006293993.1 CDS Q7C_2170 NC_017856.1 2164539 2164796 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 2164539..2164796 Methylophaga frappieri 12844069 YP_006293994.1 CDS Q7C_2171 NC_017856.1 2164883 2165926 D PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTP-binding protein Obg 2164883..2165926 Methylophaga frappieri 12844070 YP_006293995.1 CDS Q7C_2172 NC_017856.1 2165929 2167059 D PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 2165929..2167059 Methylophaga frappieri 12844071 YP_006293996.1 CDS Q7C_2173 NC_017856.1 2167122 2167382 R PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(2167122..2167382) Methylophaga frappieri 12844072 YP_006293997.1 CDS Q7C_2174 NC_017856.1 2167489 2168271 D PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); Exodeoxyribonuclease III 2167489..2168271 Methylophaga frappieri 12844073 YP_006293998.1 CDS Q7C_2175 NC_017856.1 2168268 2170394 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ complement(2168268..2170394) Methylophaga frappieri 12844074 YP_006293999.1 CDS Q7C_2176 NC_017856.1 2170634 2171377 R hypothetical protein complement(2170634..2171377) Methylophaga frappieri 12844075 YP_006294000.1 CDS Q7C_2177 NC_017856.1 2171470 2172558 R PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA polymerase IV complement(2171470..2172558) Methylophaga frappieri 12844076 YP_006294001.1 CDS Q7C_2178 NC_017856.1 2172703 2174253 D PFAM: Major Facilitator Superfamily; AmpG permease 2172703..2174253 Methylophaga frappieri 12844077 YP_006294002.1 CDS Q7C_2179 NC_017856.1 2174257 2175621 R PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase; decarboxylase complement(2174257..2175621) Methylophaga frappieri 12844078 YP_006294003.1 CDS Q7C_2180 NC_017856.1 2175664 2175843 D hypothetical protein 2175664..2175843 Methylophaga frappieri 12844079 YP_006294004.1 CDS Q7C_2181 NC_017856.1 2175843 2176511 D PFAM: Uncharacterized BCR, COG1636; hypothetical protein 2175843..2176511 Methylophaga frappieri 12844080 YP_006294005.1 CDS Q7C_2182 NC_017856.1 2176609 2176806 R PFAM: Helix-turn-helix; Cro/CI family transcriptional regulator complement(2176609..2176806) Methylophaga frappieri 12844081 YP_006294006.1 CDS Q7C_2183 NC_017856.1 2176803 2177066 R hypothetical protein complement(2176803..2177066) Methylophaga frappieri 12844082 YP_006294007.1 CDS Q7C_2184 NC_017856.1 2177473 2177946 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein complement(2177473..2177946) Methylophaga frappieri 12844083 YP_006294008.1 CDS Q7C_2185 NC_017856.1 2177989 2179413 R PFAM: Major Facilitator Superfamily; transport protein complement(2177989..2179413) Methylophaga frappieri 12844084 YP_006294009.1 CDS Q7C_2186 NC_017856.1 2179416 2182235 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 2179416..2182235 Methylophaga frappieri 12844085 YP_006294010.1 CDS Q7C_2187 NC_017856.1 2182232 2182849 D PFAM: CYTH domain; adenylate cyclase 2182232..2182849 Methylophaga frappieri 12844086 YP_006294011.1 CDS Q7C_2188 NC_017856.1 2182846 2183856 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB complement(2182846..2183856) Methylophaga frappieri 12844087 YP_006294012.1 CDS Q7C_2189 NC_017856.1 2183871 2184896 R PFAM: ApbE family; Thiamin biosynthesis lipoprotein ApbE complement(2183871..2184896) Methylophaga frappieri 12844088 YP_006294013.1 CDS Q7C_2190 NC_017856.1 2184887 2185837 R PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase complement(2184887..2185837) Methylophaga frappieri 12844089 YP_006294014.1 CDS Q7C_2191 NC_017856.1 2186052 2186981 D PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 2186052..2186981 Methylophaga frappieri 12844090 YP_006294015.1 CDS Q7C_2192 NC_017856.1 2186978 2189047 D PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 2186978..2189047 Methylophaga frappieri 12844091 YP_006294016.1 CDS Q7C_2193 NC_017856.1 2189060 2189596 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; Histidinol-phosphatase 2189060..2189596 Methylophaga frappieri 12844092 YP_006294017.1 CDS Q7C_2194 NC_017856.1 2189596 2190342 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2189596..2190342 Methylophaga frappieri 12844093 YP_006294018.1 CDS Q7C_2195 NC_017856.1 2190345 2192420 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2190345..2192420 Methylophaga frappieri 12844094 YP_006294019.1 CDS Q7C_2196 NC_017856.1 2192464 2193333 R PFAM: Peptidase family M48; protease htpX-like protein complement(2192464..2193333) Methylophaga frappieri 12844095 YP_006294020.1 CDS Q7C_2197 NC_017856.1 2193254 2193367 D hypothetical protein 2193254..2193367 Methylophaga frappieri 12844096 YP_006294021.1 CDS Q7C_2198 NC_017856.1 2193394 2193939 R PFAM: ATP-grasp domain; ATP-grasp domain-containing protein complement(2193394..2193939) Methylophaga frappieri 12844097 YP_006294022.1 CDS Q7C_2199 NC_017856.1 2194125 2194265 D hypothetical protein 2194125..2194265 Methylophaga frappieri 12844098 YP_006294023.1 CDS Q7C_2200 NC_017856.1 2194498 2195259 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Methylene tetrahydromethanopterin dehydrogenase complement(2194498..2195259) Methylophaga frappieri 12844099 YP_006294024.1 CDS Q7C_2201 NC_017856.1 2195397 2196407 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase complement(2195397..2196407) Methylophaga frappieri 12844100 YP_006294025.1 CDS Q7C_2202 NC_017856.1 2196451 2197317 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Shikimate / quinate 5-dehydrogenase; Methylene tetrahydromethanopterin dehydrogenase complement(2196451..2197317) Methylophaga frappieri 12844101 YP_006294026.1 CDS Q7C_2203 NC_017856.1 2197662 2197883 D hypothetical protein 2197662..2197883 Methylophaga frappieri 12844102 YP_006294027.1 CDS Q7C_2204 NC_017856.1 2197968 2198759 R PFAM: Sulphur oxidation protein SoxZ; hypothetical protein complement(2197968..2198759) Methylophaga frappieri 12844103 YP_006294028.1 CDS Q7C_2205 NC_017856.1 2198839 2199639 R PFAM: Sulphur oxidation protein SoxZ; hypothetical protein complement(2198839..2199639) Methylophaga frappieri 12844104 YP_006294029.1 CDS Q7C_2206 NC_017856.1 2199643 2200317 R PFAM: Metallo-beta-lactamase superfamily; metallo-beta-lactamase family protein complement(2199643..2200317) Methylophaga frappieri 12844105 YP_006294030.1 CDS Q7C_2207 NC_017856.1 2200371 2200541 R hypothetical protein complement(2200371..2200541) Methylophaga frappieri 12844106 YP_006294031.1 CDS Q7C_2208 NC_017856.1 2200644 2202044 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 2200644..2202044 Methylophaga frappieri 12844107 YP_006294032.1 CDS Q7C_2209 NC_017856.1 2202261 2204039 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein 2202261..2204039 Methylophaga frappieri 12844108 YP_006294033.1 CDS Q7C_2210 NC_017856.1 2204180 2205058 D PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein; MxaJ protein 2204180..2205058 Methylophaga frappieri 12844109 YP_006294034.1 CDS Q7C_2211 NC_017856.1 2205089 2205538 R PFAM: Domain of unknown function DUF302; hypothetical protein complement(2205089..2205538) Methylophaga frappieri 12844110 YP_006294035.1 CDS Q7C_2212 NC_017856.1 2205612 2206298 D hypothetical protein 2205612..2206298 Methylophaga frappieri 12844111 YP_006294036.1 CDS Q7C_2213 NC_017856.1 2206697 2207095 R PFAM: Stringent starvation protein B; stringent starvation protein B complement(2206697..2207095) Methylophaga frappieri 12844112 YP_006294037.1 CDS Q7C_2214 NC_017856.1 2207203 2207913 R PFAM: Cytochrome C1 family; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit complement(2207203..2207913) Methylophaga frappieri 12844113 YP_006294038.1 CDS Q7C_2215 NC_017856.1 2207910 2209124 R PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD; Ubiquinol--cytochrome c reductase, cytochrome B subunit complement(2207910..2209124) Methylophaga frappieri 12844114 YP_006294039.1 CDS Q7C_2216 NC_017856.1 2209124 2209720 R PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Ubiquinol-cytochrome C reductase iron-sulfur subunit complement(2209124..2209720) Methylophaga frappieri 12844115 YP_006294040.1 CDS Q7C_2217 NC_017856.1 2209886 2210329 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor (Cupredoxin) (Blue copper protein) complement(2209886..2210329) Methylophaga frappieri 12844116 YP_006294041.1 CDS Q7C_2218 NC_017856.1 2210782 2211021 D PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; hypothetical protein 2210782..2211021 Methylophaga frappieri 12844117 YP_006294042.1 CDS Q7C_2219 NC_017856.1 2211118 2212899 D PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase 2211118..2212899 Methylophaga frappieri 12844118 YP_006294043.1 CDS Q7C_2220 NC_017856.1 2212945 2214057 D PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase 2212945..2214057 Methylophaga frappieri 12844119 YP_006294044.1 CDS Q7C_2221 NC_017856.1 2214072 2214257 D PFAM: Zinc-finger domain; hypothetical protein 2214072..2214257 Methylophaga frappieri 12844120 YP_006294045.1 CDS Q7C_2222 NC_017856.1 2214254 2214694 D PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; Thiamin-phosphate pyrophosphorylase-like protein 2214254..2214694 Methylophaga frappieri 12844121 YP_006294046.1 CDS Q7C_2223 NC_017856.1 2214651 2214845 R PFAM: Domain of unknown function (DUF329); zinc-binding protein complement(2214651..2214845) Methylophaga frappieri 12844122 YP_006294047.1 CDS Q7C_2224 NC_017856.1 2214845 2215621 R PFAM: Protein of unknown function (DUF1342); hypothetical protein complement(2214845..2215621) Methylophaga frappieri 12844123 YP_006294048.1 CDS Q7C_2225 NC_017856.1 2215628 2216239 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(2215628..2216239) Methylophaga frappieri 12844124 YP_006294049.1 CDS Q7C_2226 NC_017856.1 2216243 2217112 R PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; Leader peptidase (Prepilin peptidase) / N-methyltransferase complement(2216243..2217112) Methylophaga frappieri 12844125 YP_006294050.1 CDS Q7C_2227 NC_017856.1 2217112 2218353 R PFAM: Bacterial type II secretion system protein F domain; type IV fimbrial assembly protein PilC complement(2217112..2218353) Methylophaga frappieri 12844126 YP_006294051.1 CDS Q7C_2228 NC_017856.1 2218357 2220075 R PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; type IV fimbrial assembly, ATPase PilB complement(2218357..2220075) Methylophaga frappieri 12844127 YP_006294052.1 CDS Q7C_2229 NC_017856.1 2220218 2220346 D hypothetical protein 2220218..2220346 Methylophaga frappieri 12844128 YP_006294053.1 CDS Q7C_2230 NC_017856.1 2220353 2221600 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 2220353..2221600 Methylophaga frappieri 12844129 YP_006294054.1 CDS Q7C_2231 NC_017856.1 2221604 2222452 D PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 2221604..2222452 Methylophaga frappieri 12844130 YP_006294055.1 CDS Q7C_2232 NC_017856.1 2222428 2223132 D PFAM: Protein of unknown function, DUF484; hypothetical protein 2222428..2223132 Methylophaga frappieri 12844131 YP_006294056.1 CDS Q7C_2233 NC_017856.1 2223116 2224036 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerC 2223116..2224036 Methylophaga frappieri 12844132 YP_006294057.1 CDS Q7C_2234 NC_017856.1 2224099 2226813 R PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I complement(2224099..2226813) Methylophaga frappieri 12844133 YP_006294058.1 CDS Q7C_2235 NC_017856.1 2226980 2227237 D PFAM: Protein of unknown function (DUF2782); hypothetical protein 2226980..2227237 Methylophaga frappieri 12844134 YP_006294059.1 CDS Q7C_2236 NC_017856.1 2227260 2228216 D PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Homoserine kinase 2227260..2228216 Methylophaga frappieri 12844135 YP_006294060.1 CDS Q7C_2237 NC_017856.1 2228216 2229253 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; Lipopolysaccharide heptosyltransferase I 2228216..2229253 Methylophaga frappieri 12844136 YP_006294061.1 CDS Q7C_2238 NC_017856.1 2229281 2230720 D PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase 2229281..2230720 Methylophaga frappieri 12844137 YP_006294062.1 CDS Q7C_2239 NC_017856.1 2230764 2231063 D hypothetical protein 2230764..2231063 Methylophaga frappieri 12844138 YP_006294063.1 CDS Q7C_2240 NC_017856.1 2231065 2231712 R hypothetical protein complement(2231065..2231712) Methylophaga frappieri 12844139 YP_006294064.1 CDS Q7C_2241 NC_017856.1 2231813 2232640 R PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; TC 3.A.1.7.1; phosphate transport ATP-binding protein PstB complement(2231813..2232640) Methylophaga frappieri 12844140 YP_006294065.1 CDS Q7C_2242 NC_017856.1 2232656 2233558 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; TC 3.A.1.7.1; phosphate ABC transporter permease complement(2232656..2233558) Methylophaga frappieri 12844141 YP_006294066.1 CDS Q7C_2243 NC_017856.1 2233555 2234532 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; TC 3.A.1.7.1; phosphate ABC transporter permease complement(2233555..2234532) Methylophaga frappieri 12844142 YP_006294067.1 CDS Q7C_2244 NC_017856.1 2234655 2235713 R TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(2234655..2235713) Methylophaga frappieri 12844143 YP_006294068.1 CDS Q7C_2245 NC_017856.1 2235841 2236641 R PFAM: Aldo/keto reductase family; oxidoreductase, aldo/keto reductase family complement(2235841..2236641) Methylophaga frappieri 12844144 YP_006294069.1 CDS Q7C_2246 NC_017856.1 2236638 2237834 R PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase complement(2236638..2237834) Methylophaga frappieri 12844145 YP_006294070.1 CDS Q7C_2247 NC_017856.1 2237831 2238391 R PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; Phosphoheptose isomerase 1 complement(2237831..2238391) Methylophaga frappieri 12844146 YP_006294071.1 CDS Q7C_2248 NC_017856.1 2238527 2239621 D PFAM: Glycosyl transferases group 1; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG 2238527..2239621 Methylophaga frappieri 12844147 YP_006294072.1 CDS Q7C_2249 NC_017856.1 2239621 2240436 D PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase 2239621..2240436 Methylophaga frappieri 12844148 YP_006294073.1 CDS Q7C_2250 NC_017856.1 2240429 2241766 D PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Serine/threonine protein kinase 2240429..2241766 Methylophaga frappieri 12844149 YP_006294074.1 CDS Q7C_2251 NC_017856.1 2241758 2242399 R PFAM: Polysaccharide pyruvyl transferase; pyruvyltransferase complement(2241758..2242399) Methylophaga frappieri 12844150 YP_006294075.1 CDS Q7C_2252 NC_017856.1 2242536 2244263 R PFAM: Carbamoyltransferase; Carbamoyltransferase in large core OS assembly cluster complement(2242536..2244263) Methylophaga frappieri 12844151 YP_006294076.1 CDS Q7C_2253 NC_017856.1 2244336 2245835 R hypothetical protein complement(2244336..2245835) Methylophaga frappieri 12844152 YP_006294077.1 CDS Q7C_2254 NC_017856.1 2245836 2246645 R PFAM: Glycosyl transferase family 2; glycosyltransferase complement(2245836..2246645) Methylophaga frappieri 12844153 YP_006294078.1 CDS Q7C_2255 NC_017856.1 2246661 2247617 R PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; ADP-heptose--lipooligosaccharide heptosyltransferase II complement(2246661..2247617) Methylophaga frappieri 12844154 YP_006294079.1 CDS Q7C_2256 NC_017856.1 2247686 2248495 R PFAM: ZIP Zinc transporter; Zinc transporter, ZIP family complement(2247686..2248495) Methylophaga frappieri 12844155 YP_006294080.1 CDS Q7C_2257 NC_017856.1 2248532 2249077 R PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein complement(2248532..2249077) Methylophaga frappieri 12844156 YP_006294081.1 CDS Q7C_2258 NC_017856.1 2249110 2249232 D hypothetical protein 2249110..2249232 Methylophaga frappieri 12844157 YP_006294082.1 CDS Q7C_2259 NC_017856.1 2249265 2250065 R PFAM: Inositol monophosphatase family; Inositol-1-monophosphatase complement(2249265..2250065) Methylophaga frappieri 12844158 YP_006294083.1 CDS Q7C_2260 NC_017856.1 2250148 2250867 D PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E 2250148..2250867 Methylophaga frappieri 12844159 YP_006294084.1 CDS Q7C_2261 NC_017856.1 2250864 2251178 D PFAM: Protein of unknown function (DUF3301); hypothetical protein 2250864..2251178 Methylophaga frappieri 12844160 YP_006294085.1 CDS Q7C_2262 NC_017856.1 2251187 2252062 D PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-N(5)-glutamine methyltransferase PrmC 2251187..2252062 Methylophaga frappieri 12844161 YP_006294086.1 CDS Q7C_2263 NC_017856.1 2252059 2252820 D PFAM: MoeZ/MoeB domain; ThiF family; Sulfur carrier protein adenylyltransferase ThiF 2252059..2252820 Methylophaga frappieri 12844162 YP_006294087.1 CDS Q7C_2264 NC_017856.1 2252817 2253227 D Mov34/MPN/PAD-1 family protein 2252817..2253227 Methylophaga frappieri 12844163 YP_006294088.1 CDS Q7C_2265 NC_017856.1 2253224 2254549 D PFAM: Putative modulator of DNA gyrase; PMID 12029038; TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex 2253224..2254549 Methylophaga frappieri 12844164 YP_006294089.1 CDS Q7C_2266 NC_017856.1 2254560 2256731 R PFAM: PilZ domain; PilZ domain-containing protein complement(2254560..2256731) Methylophaga frappieri 12844165 YP_006294090.1 CDS Q7C_2267 NC_017856.1 2256735 2257001 R PFAM: BolA-like protein; Cell division protein BolA complement(2256735..2257001) Methylophaga frappieri 12844166 YP_006294091.1 CDS Q7C_2268 NC_017856.1 2256998 2257297 R PFAM: YCII-related domain; YciL protein complement(2256998..2257297) Methylophaga frappieri 12844167 YP_006294092.1 CDS Q7C_2269 NC_017856.1 2257297 2257890 R PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A; Intracellular septation protein IspA complement(2257297..2257890) Methylophaga frappieri 12844168 YP_006294093.1 CDS Q7C_2270 NC_017856.1 2257942 2258793 D PFAM: PHP domain; metal-dependent phosphoesterase 2257942..2258793 Methylophaga frappieri 12844169 YP_006294094.1 CDS Q7C_2271 NC_017856.1 2258806 2259432 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; YciO family 2258806..2259432 Methylophaga frappieri 12844170 YP_006294095.1 CDS Q7C_2272 NC_017856.1 2259429 2260100 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2259429..2260100 Methylophaga frappieri 12844171 YP_006294096.1 CDS Q7C_2275 NC_017856.1 2262782 2263606 R PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; nitrite transporter from formate/nitrite family complement(2262782..2263606) Methylophaga frappieri 12844173 YP_006294097.1 CDS Q7C_2276 NC_017856.1 2263780 2265903 R PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) complement(2263780..2265903) Methylophaga frappieri 12844174 YP_006294098.1 CDS Q7C_2277 NC_017856.1 2265973 2266842 R PFAM: short chain dehydrogenase; NAD(P)-dependent oxidoreductase EC-YbbO complement(2265973..2266842) Methylophaga frappieri 12844175 YP_006294099.1 CDS Q7C_2278 NC_017856.1 2266930 2267763 D PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; Chemotaxis protein methyltransferase CheR 2266930..2267763 Methylophaga frappieri 12844176 YP_006294100.1 CDS Q7C_2279 NC_017856.1 2267744 2268403 R transmembrane protein complement(2267744..2268403) Methylophaga frappieri 12844177 YP_006294101.1 CDS Q7C_2280 NC_017856.1 2268458 2269216 D PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein 2268458..2269216 Methylophaga frappieri 12844178 YP_006294102.1 CDS Q7C_2281 NC_017856.1 2269230 2270576 D PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); Ribonuclease BN 2269230..2270576 Methylophaga frappieri 12844179 YP_006294103.1 CDS Q7C_2282 NC_017856.1 2270569 2271786 D PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase 2270569..2271786 Methylophaga frappieri 12844180 YP_006294104.1 CDS Q7C_2283 NC_017856.1 2271767 2272222 D PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 2271767..2272222 Methylophaga frappieri 12844181 YP_006294105.1 CDS Q7C_2284 NC_017856.1 2272222 2274876 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 2272222..2274876 Methylophaga frappieri 12844182 YP_006294106.1 CDS Q7C_2285 NC_017856.1 2274903 2275805 D PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; Acetylglutamate kinase 2274903..2275805 Methylophaga frappieri 12844183 YP_006294107.1 CDS Q7C_2286 NC_017856.1 2275805 2276422 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator SlmA 2275805..2276422 Methylophaga frappieri 12844184 YP_006294108.1 CDS Q7C_2287 NC_017856.1 2276419 2276841 D hypothetical protein 2276419..2276841 Methylophaga frappieri 12844185 YP_006294109.1 CDS Q7C_2288 NC_017856.1 2276914 2278356 D PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 2276914..2278356 Methylophaga frappieri 12844186 YP_006294110.1 CDS Q7C_2289 NC_017856.1 2278462 2280177 D PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, PrtD family; ABC-type protease/lipase transport system, ATPase and permease components 2278462..2280177 Methylophaga frappieri 12844187 YP_006294111.1 CDS Q7C_2290 NC_017856.1 2280174 2281523 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; type I secretion membrane fusion protein, HlyD 2280174..2281523 Methylophaga frappieri 12844188 YP_006294112.1 CDS Q7C_2291 NC_017856.1 2281599 2282843 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 2281599..2282843 Methylophaga frappieri 12844189 YP_006294113.1 CDS Q7C_2292 NC_017856.1 2282835 2282948 R hypothetical protein complement(2282835..2282948) Methylophaga frappieri 12844190 YP_006294114.1 CDS Q7C_2293 NC_017856.1 2282847 2283956 D PFAM: Glycosyl transferases group 1; glycosyltransferase 2282847..2283956 Methylophaga frappieri 12844191 YP_006294115.1 CDS Q7C_2294 NC_017856.1 2283960 2285036 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2283960..2285036 Methylophaga frappieri 12844192 YP_006294116.1 CDS Q7C_2295 NC_017856.1 2285108 2285893 D PFAM: ABC-2 type transporter; O-antigen export system permease protein RfbD 2285108..2285893 Methylophaga frappieri 12844193 YP_006294117.1 CDS Q7C_2296 NC_017856.1 2285890 2287119 D PFAM: ABC transporter; ABC transporter ATP-binding protein 2285890..2287119 Methylophaga frappieri 12844194 YP_006294118.1 CDS Q7C_2297 NC_017856.1 2287172 2288347 D glycosyltransferase 2287172..2288347 Methylophaga frappieri 12844195 YP_006294119.1 CDS Q7C_2298 NC_017856.1 2288344 2290086 D PFAM: Glycosyl transferases group 1; glycosyltransferase WbpX 2288344..2290086 Methylophaga frappieri 12844196 YP_006294120.1 CDS Q7C_2299 NC_017856.1 2290086 2291060 D PFAM: Acyltransferase family; acyltransferase 2290086..2291060 Methylophaga frappieri 12844197 YP_006294121.1 CDS Q7C_2300 NC_017856.1 2291212 2292288 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2291212..2292288 Methylophaga frappieri 12844198 YP_006294122.1 CDS Q7C_2301 NC_017856.1 2292285 2293130 D PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 2292285..2293130 Methylophaga frappieri 12844199 YP_006294123.1 CDS Q7C_2302 NC_017856.1 2293213 2294205 D PFAM: Methyltransferase domain; methylase 2293213..2294205 Methylophaga frappieri 12844200 YP_006294124.1 CDS Q7C_2303 NC_017856.1 2294319 2294432 R hypothetical protein complement(2294319..2294432) Methylophaga frappieri 12844201 YP_006294125.1 CDS Q7C_2304 NC_017856.1 2294745 2298452 D type I secretion target repeat protein 2294745..2298452 Methylophaga frappieri 12844202 YP_006294126.1 CDS Q7C_2305 NC_017856.1 2298687 2300090 D S-layer protein 2298687..2300090 Methylophaga frappieri 12844203 YP_006294127.1 CDS Q7C_2306 NC_017856.1 2300104 2302287 D type I secretion target repeat protein 2300104..2302287 Methylophaga frappieri 12844204 YP_006294128.1 CDS Q7C_2307 NC_017856.1 2302284 2302397 D hypothetical protein 2302284..2302397 Methylophaga frappieri 12844205 YP_006294129.1 CDS Q7C_2308 NC_017856.1 2302451 2304391 D PFAM: Tetratricopeptide repeat; TPR domain-containing protein 2302451..2304391 Methylophaga frappieri 12844206 YP_006294130.1 CDS Q7C_2309 NC_017856.1 2304597 2305184 D PFAM: YceI-like domain; hypothetical protein 2304597..2305184 Methylophaga frappieri 12844207 YP_006294131.1 CDS Q7C_2310 NC_017856.1 2305518 2305730 D hypothetical protein 2305518..2305730 Methylophaga frappieri 12844208 YP_006294132.1 CDS Q7C_2311 NC_017856.1 2305779 2306447 D PFAM: 2OG-Fe(II) oxygenase superfamily; Iron-uptake factor PiuC 2305779..2306447 Methylophaga frappieri 12844209 YP_006294133.1 CDS Q7C_2312 NC_017856.1 2306478 2307305 D PFAM: SapC; TC 3.A.1.5.5; Peptide transport system permease protein sapC 2306478..2307305 Methylophaga frappieri 12844210 YP_006294134.1 CDS Q7C_2313 NC_017856.1 2307368 2308522 D PFAM: Glycosyl transferases group 1; glycosyl transferase, group 1 family protein 2307368..2308522 Methylophaga frappieri 12844211 YP_006294135.1 CDS Q7C_2314 NC_017856.1 2308558 2309766 D PFAM: Trypsin; Calx-beta domain; Calx-beta domain-containing protein 2308558..2309766 Methylophaga frappieri 12844212 YP_006294136.1 CDS Q7C_2315 NC_017856.1 2309961 2322509 D PFAM: von Willebrand factor type A domain; TIGRFAM: T1SS-143 repeat domain; VCBS repeat; RTX toxins-related Ca2+-binding protein 2309961..2322509 Methylophaga frappieri 12844213 YP_006294137.1 CDS Q7C_2316 NC_017856.1 2322595 2323491 D PFAM: Glycosyltransferase (GlcNAc); glycosyltransferase (GlcNAc) 2322595..2323491 Methylophaga frappieri 12844214 YP_006294138.1 CDS Q7C_2317 NC_017856.1 2323554 2323721 D hypothetical protein 2323554..2323721 Methylophaga frappieri 12844215 YP_006294139.1 CDS Q7C_2318 NC_017856.1 2323842 2324747 D PFAM: Haemolysin-type calcium binding protein related domain; hemolysin-type calcium binding protein related domain-containing protein 2323842..2324747 Methylophaga frappieri 12844216 YP_006294140.1 CDS Q7C_2319 NC_017856.1 2324791 2325216 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilus assembly protein PilE complement(2324791..2325216) Methylophaga frappieri 12844217 YP_006294141.1 CDS Q7C_2320 NC_017856.1 2325206 2325508 R hypothetical protein complement(2325206..2325508) Methylophaga frappieri 12844218 YP_006294142.1 CDS Q7C_2321 NC_017856.1 2325520 2329122 R PFAM: Neisseria PilC protein; type IV fimbrial biogenesis protein PilY1 complement(2325520..2329122) Methylophaga frappieri 12844219 YP_006294143.1 CDS Q7C_2322 NC_017856.1 2329125 2329676 R type IV fimbrial biogenesis protein PilX complement(2329125..2329676) Methylophaga frappieri 12844220 YP_006294144.1 CDS Q7C_2323 NC_017856.1 2329673 2330680 R type IV fimbrial biogenesis protein PilW complement(2329673..2330680) Methylophaga frappieri 12844221 YP_006294145.1 CDS Q7C_2324 NC_017856.1 2330728 2331198 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilV complement(2330728..2331198) Methylophaga frappieri 12844222 YP_006294146.1 CDS Q7C_2325 NC_017856.1 2331195 2331755 R PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H; type IV fimbrial biogenesis protein FimT complement(2331195..2331755) Methylophaga frappieri 12844223 YP_006294147.1 CDS Q7C_2326 NC_017856.1 2332012 2332413 D PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 2332012..2332413 Methylophaga frappieri 12844224 YP_006294148.1 CDS Q7C_2327 NC_017856.1 2332416 2332829 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 2332416..2332829 Methylophaga frappieri 12844225 YP_006294149.1 CDS Q7C_2328 NC_017856.1 2332844 2333527 D PFAM: Flagellar hook capping protein; flagellar basal-body rod modification protein FlgD 2332844..2333527 Methylophaga frappieri 12844226 YP_006294150.1 CDS Q7C_2329 NC_017856.1 2333540 2334835 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook protein FlgE 2333540..2334835 Methylophaga frappieri 12844227 YP_006294151.1 CDS Q7C_2330 NC_017856.1 2334861 2335604 D PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgF 2334861..2335604 Methylophaga frappieri 12844228 YP_006294152.1 CDS Q7C_2331 NC_017856.1 2335645 2336430 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 2335645..2336430 Methylophaga frappieri 12844229 YP_006294153.1 CDS Q7C_2332 NC_017856.1 2336602 2337312 D PFAM: Flagellar L-ring protein; flagellar L-ring protein FlgH 2336602..2337312 Methylophaga frappieri 12844230 YP_006294154.1 CDS Q7C_2333 NC_017856.1 2337325 2338422 D PFAM: Flagellar P-ring protein; flagellar P-ring protein FlgI 2337325..2338422 Methylophaga frappieri 12844231 YP_006294155.1 CDS Q7C_2334 NC_017856.1 2338422 2339429 D PFAM: Rod binding protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; flagellar protein FlgJ (peptidoglycan hydrolase) 2338422..2339429 Methylophaga frappieri 12844232 YP_006294156.1 CDS Q7C_2335 NC_017856.1 2339431 2341161 D PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 2339431..2341161 Methylophaga frappieri 12844233 YP_006294157.1 CDS Q7C_2336 NC_017856.1 2341171 2342376 D PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein FlgL 2341171..2342376 Methylophaga frappieri 12844234 YP_006294158.1 CDS Q7C_2337 NC_017856.1 2342541 2344346 D PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaB 2342541..2344346 Methylophaga frappieri 12844235 YP_006294159.1 CDS Q7C_2338 NC_017856.1 2344641 2346437 D PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaB 2344641..2346437 Methylophaga frappieri 12844236 YP_006294160.1 CDS Q7C_2339 NC_017856.1 2346503 2346898 D PFAM: FlaG protein; flagellin protein FlaG 2346503..2346898 Methylophaga frappieri 12844237 YP_006294161.1 CDS Q7C_2340 NC_017856.1 2346919 2348292 D PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif; flagellar hook-associated protein FliD 2346919..2348292 Methylophaga frappieri 12844238 YP_006294162.1 CDS Q7C_2341 NC_017856.1 2348403 2348831 D PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthesis protein FliS 2348403..2348831 Methylophaga frappieri 12844239 YP_006294163.1 CDS Q7C_2342 NC_017856.1 2348832 2349152 D PFAM: Flagellar protein FliT; flagellar protein FliT 2348832..2349152 Methylophaga frappieri 12844240 YP_006294164.1 CDS Q7C_2343 NC_017856.1 2349261 2350730 D PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2349261..2350730 Methylophaga frappieri 12844241 YP_006294165.1 CDS Q7C_2344 NC_017856.1 2350849 2351958 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; flagellar sensor histidine kinase FleS 2350849..2351958 Methylophaga frappieri 12844242 YP_006294166.1 CDS Q7C_2345 NC_017856.1 2351955 2353316 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2351955..2353316 Methylophaga frappieri 12844243 YP_006294167.1 CDS Q7C_2346 NC_017856.1 2353365 2353697 D PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 2353365..2353697 Methylophaga frappieri 12844244 YP_006294168.1 CDS Q7C_2347 NC_017856.1 2353728 2355389 D PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar M-ring protein FliF 2353728..2355389 Methylophaga frappieri 12844245 YP_006294169.1 CDS Q7C_2348 NC_017856.1 2355389 2356399 D PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2355389..2356399 Methylophaga frappieri 12844246 YP_006294170.1 CDS Q7C_2349 NC_017856.1 2356386 2357075 D PFAM: Flagellar assembly protein FliH; flagellar assembly protein FliH 2356386..2357075 Methylophaga frappieri 12844247 YP_006294171.1 CDS Q7C_2350 NC_017856.1 2357062 2358471 D PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; flagellum-specific ATP synthase FliI 2357062..2358471 Methylophaga frappieri 12844248 YP_006294172.1 CDS Q7C_2351 NC_017856.1 2358490 2358936 D PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar protein FliJ 2358490..2358936 Methylophaga frappieri 12843471 YP_006294173.1 CDS Q7C_2352 NC_017856.1 2358989 2359315 D anti-anti-sigma regulatory factor 2358989..2359315 Methylophaga frappieri 12843472 YP_006294174.1 CDS Q7C_2353 NC_017856.1 2359290 2359655 D PFAM: Response regulator receiver domain; chemotaxis regulator 2359290..2359655 Methylophaga frappieri 12843473 YP_006294175.1 CDS Q7C_2354 NC_017856.1 2359662 2361431 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; signal transduction histidine kinase 2359662..2361431 Methylophaga frappieri 12843474 YP_006294176.1 CDS Q7C_2355 NC_017856.1 2361426 2361641 R hypothetical protein complement(2361426..2361641) Methylophaga frappieri 12843475 YP_006294177.1 CDS Q7C_2356 NC_017856.1 2361665 2361808 D hypothetical protein 2361665..2361808 Methylophaga frappieri 12843476 YP_006294178.1 CDS Q7C_2357 NC_017856.1 2361805 2362515 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid a,c-diamide synthase 2361805..2362515 Methylophaga frappieri 12843477 YP_006294179.1 CDS Q7C_2358 NC_017856.1 2362693 2364006 D PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK 2362693..2364006 Methylophaga frappieri 12843478 YP_006294180.1 CDS Q7C_2359 NC_017856.1 2364084 2365241 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; Methyl-accepting chemotaxis protein 2364084..2365241 Methylophaga frappieri 12843479 YP_006294181.1 CDS Q7C_2360 NC_017856.1 2365290 2365979 R PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; Orotidine 5'-phosphate decarboxylase complement(2365290..2365979) Methylophaga frappieri 12843480 YP_006294182.1 CDS Q7C_2361 NC_017856.1 2366089 2367198 D PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 2366089..2367198 Methylophaga frappieri 12843481 YP_006294183.1 CDS Q7C_2362 NC_017856.1 2367267 2367593 D PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; TC 3.A.5.1.1; preprotein translocase subunit YajC 2367267..2367593 Methylophaga frappieri 12843482 YP_006294184.1 CDS Q7C_2363 NC_017856.1 2367645 2369501 D PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; TC 3.A.5.1.1; protein-export membrane protein SecD 2367645..2369501 Methylophaga frappieri 12843483 YP_006294185.1 CDS Q7C_2364 NC_017856.1 2369512 2370462 D PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; TC 3.A.5.1.1; protein-export membrane protein SecF 2369512..2370462 Methylophaga frappieri 12843484 YP_006294186.1 CDS Q7C_2365 NC_017856.1 2370574 2371041 R PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase complement(2370574..2371041) Methylophaga frappieri 12843485 YP_006294187.1 CDS Q7C_2366 NC_017856.1 2371206 2371433 R hypothetical protein complement(2371206..2371433) Methylophaga frappieri 12843486 YP_006294188.1 CDS Q7C_2367 NC_017856.1 2371606 2372559 D PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat; PQQ-dependent catabolism-associated beta-propeller protein 2371606..2372559 Methylophaga frappieri 12843487 YP_006294189.1 CDS Q7C_2368 NC_017856.1 2372586 2372732 R hypothetical protein complement(2372586..2372732) Methylophaga frappieri 12843488 YP_006294190.1 CDS Q7C_2369 NC_017856.1 2372776 2373159 D hypothetical protein 2372776..2373159 Methylophaga frappieri 12843489 YP_006294191.1 CDS Q7C_2370 NC_017856.1 2373195 2374508 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2373195..2374508 Methylophaga frappieri 12843490 YP_006294192.1 CDS Q7C_2371 NC_017856.1 2374505 2375113 D PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX 2374505..2375113 Methylophaga frappieri 12843491 YP_006294193.1 CDS Q7C_2372 NC_017856.1 2375188 2376861 D PFAM: Formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 2375188..2376861 Methylophaga frappieri 12843492 YP_006294194.1 CDS Q7C_2373 NC_017856.1 2376858 2378525 R PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; Ubiquinone biosynthesis monooxygenase UbiB complement(2376858..2378525) Methylophaga frappieri 12843493 YP_006294195.1 CDS Q7C_2374 NC_017856.1 2378522 2379121 R PFAM: SCP-2 sterol transfer family; protein YigP complement(2378522..2379121) Methylophaga frappieri 12843494 YP_006294196.1 CDS Q7C_2375 NC_017856.1 2379121 2379867 R PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE complement(2379121..2379867) Methylophaga frappieri 12843495 YP_006294197.1 CDS Q7C_2376 NC_017856.1 2379867 2380232 R PFAM: Protein of unknown function (DUF971); hypothetical protein complement(2379867..2380232) Methylophaga frappieri 12843496 YP_006294198.1 CDS Q7C_2377 NC_017856.1 2380239 2381561 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; ATP-dependent hsl protease ATP-binding subunit HslU complement(2380239..2381561) Methylophaga frappieri 12843497 YP_006294199.1 CDS Q7C_2378 NC_017856.1 2381570 2382109 R PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease HslV complement(2381570..2382109) Methylophaga frappieri 12843498 YP_006294200.1 CDS Q7C_2382 NC_017856.1 2382633 2383823 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2382633..2383823 Methylophaga frappieri 12843502 YP_006294201.1 CDS Q7C_2384 NC_017856.1 2384032 2384328 D PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; TC 3.A.5.1.1; preprotein translocase subunit SecE 2384032..2384328 Methylophaga frappieri 12843504 YP_006294202.1 CDS Q7C_2385 NC_017856.1 2384342 2384875 D PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein NusG 2384342..2384875 Methylophaga frappieri 12843505 YP_006294203.1 CDS Q7C_2386 NC_017856.1 2384933 2385367 D PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 2384933..2385367 Methylophaga frappieri 12843506 YP_006294204.1 CDS Q7C_2387 NC_017856.1 2385367 2386059 D PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 2385367..2386059 Methylophaga frappieri 12843507 YP_006294205.1 CDS Q7C_2388 NC_017856.1 2386268 2386795 D PFAM: Ribosomal protein L10; 50S ribosomal protein L10 2386268..2386795 Methylophaga frappieri 12843508 YP_006294206.1 CDS Q7C_2389 NC_017856.1 2386853 2387230 D PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2386853..2387230 Methylophaga frappieri 12843509 YP_006294207.1 CDS Q7C_2390 NC_017856.1 2387401 2391477 D PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 2387401..2391477 Methylophaga frappieri 12843510 YP_006294208.1 CDS Q7C_2391 NC_017856.1 2391530 2395726 D PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 2391530..2395726 Methylophaga frappieri 12843511 YP_006294209.1 CDS Q7C_2392 NC_017856.1 2395876 2396250 D PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 2395876..2396250 Methylophaga frappieri 12843512 YP_006294210.1 CDS Q7C_2393 NC_017856.1 2396295 2396765 D PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 2396295..2396765 Methylophaga frappieri 12843513 YP_006294211.1 CDS Q7C_2394 NC_017856.1 2396882 2398936 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G 2396882..2398936 Methylophaga frappieri 12843514 YP_006294212.1 CDS Q7C_2395 NC_017856.1 2398963 2400153 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2398963..2400153 Methylophaga frappieri 12843515 YP_006294213.1 CDS Q7C_2396 NC_017856.1 2400159 2400473 D PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 2400159..2400473 Methylophaga frappieri 12843516 YP_006294214.1 CDS Q7C_2397 NC_017856.1 2400487 2401119 D PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 2400487..2401119 Methylophaga frappieri 12843517 YP_006294215.1 CDS Q7C_2398 NC_017856.1 2401142 2401759 D PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 2401142..2401759 Methylophaga frappieri 12843518 YP_006294216.1 CDS Q7C_2399 NC_017856.1 2401756 2402049 D PFAM: Ribosomal protein L23; 50S ribosomal protein L23 2401756..2402049 Methylophaga frappieri 12843519 YP_006294217.1 CDS Q7C_2400 NC_017856.1 2402077 2402904 D PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 2402077..2402904 Methylophaga frappieri 12843520 YP_006294218.1 CDS Q7C_2401 NC_017856.1 2402924 2403199 D PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 2402924..2403199 Methylophaga frappieri 12843521 YP_006294219.1 CDS Q7C_2402 NC_017856.1 2403209 2403541 D PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 2403209..2403541 Methylophaga frappieri 12843522 YP_006294220.1 CDS Q7C_2403 NC_017856.1 2403554 2404219 D PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 2403554..2404219 Methylophaga frappieri 12843523 YP_006294221.1 CDS Q7C_2404 NC_017856.1 2404231 2404644 D PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 2404231..2404644 Methylophaga frappieri 12843524 YP_006294222.1 CDS Q7C_2405 NC_017856.1 2404644 2404829 D PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 2404644..2404829 Methylophaga frappieri 12843525 YP_006294223.1 CDS Q7C_2406 NC_017856.1 2404839 2405099 D PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 2404839..2405099 Methylophaga frappieri 12843526 YP_006294224.1 CDS Q7C_2407 NC_017856.1 2405127 2405495 D PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 2405127..2405495 Methylophaga frappieri 12843527 YP_006294225.1 CDS Q7C_2408 NC_017856.1 2405512 2405829 D TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 2405512..2405829 Methylophaga frappieri 12843528 YP_006294226.1 CDS Q7C_2409 NC_017856.1 2405850 2406389 D PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 2405850..2406389 Methylophaga frappieri 12843529 YP_006294227.1 CDS Q7C_2410 NC_017856.1 2406414 2406719 D PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 2406414..2406719 Methylophaga frappieri 12843530 YP_006294228.1 CDS Q7C_2411 NC_017856.1 2406749 2407144 D PFAM: Ribosomal protein S8; 30S ribosomal protein S8 2406749..2407144 Methylophaga frappieri 12843531 YP_006294229.1 CDS Q7C_2412 NC_017856.1 2407171 2407704 D PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 2407171..2407704 Methylophaga frappieri 12843532 YP_006294230.1 CDS Q7C_2413 NC_017856.1 2407783 2408070 D PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 2407783..2408070 Methylophaga frappieri 12843533 YP_006294231.1 CDS Q7C_2414 NC_017856.1 2408089 2408598 D PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 2408089..2408598 Methylophaga frappieri 12843534 YP_006294232.1 CDS Q7C_2415 NC_017856.1 2408604 2408795 D PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 2408604..2408795 Methylophaga frappieri 12843535 YP_006294233.1 CDS Q7C_2416 NC_017856.1 2408795 2409229 D PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 2408795..2409229 Methylophaga frappieri 12843536 YP_006294234.1 CDS Q7C_2417 NC_017856.1 2409237 2410589 D PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; TC 3.A.5.1.1; preprotein translocase subunit SecY 2409237..2410589 Methylophaga frappieri 12843537 YP_006294235.1 CDS Q7C_2418 NC_017856.1 2410622 2410735 D PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 2410622..2410735 Methylophaga frappieri 12843538 YP_006294236.1 CDS Q7C_2419 NC_017856.1 2410823 2411176 D PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 2410823..2411176 Methylophaga frappieri 12843539 YP_006294237.1 CDS Q7C_2420 NC_017856.1 2411188 2411577 D PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 2411188..2411577 Methylophaga frappieri 12843540 YP_006294238.1 CDS Q7C_2421 NC_017856.1 2411598 2412218 D PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 2411598..2412218 Methylophaga frappieri 12843541 YP_006294239.1 CDS Q7C_2422 NC_017856.1 2412259 2413242 D PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 2412259..2413242 Methylophaga frappieri 12843542 YP_006294240.1 CDS Q7C_2423 NC_017856.1 2413283 2413669 D PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 2413283..2413669 Methylophaga frappieri 12843543 YP_006294241.1 CDS Q7C_2429 NC_017856.1 2419633 2420199 R PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; Starvation lipoprotein Slp-like protein complement(2419633..2420199) Methylophaga frappieri 12843549 YP_006294242.1 CDS Q7C_2430 NC_017856.1 2420418 2421677 D PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho 2420418..2421677 Methylophaga frappieri 12843550 YP_006294243.1 CDS Q7C_2431 NC_017856.1 2421692 2422627 D PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2421692..2422627 Methylophaga frappieri 12843551 YP_006294244.1 CDS Q7C_2432 NC_017856.1 2422709 2422933 D PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq 2422709..2422933 Methylophaga frappieri 12843552 YP_006294245.1 CDS Q7C_2433 NC_017856.1 2422947 2424095 D PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX 2422947..2424095 Methylophaga frappieri 12843554 YP_006294246.1 CDS Q7C_2434 NC_017856.1 2424174 2425379 D PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 2424174..2425379 Methylophaga frappieri 12843556 YP_006294247.1 CDS Q7C_2435 NC_017856.1 2425382 2426254 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 2425382..2426254 Methylophaga frappieri 12843558 YP_006294248.1 CDS Q7C_2436 NC_017856.1 2426259 2426447 D PFAM: Uncharacterized protein conserved in bacteria (DUF2065); hypothetical protein 2426259..2426447 Methylophaga frappieri 12843560 YP_006294249.1 CDS Q7C_2437 NC_017856.1 2426452 2427627 D TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 2426452..2427627 Methylophaga frappieri 12843562 YP_006294250.1 CDS Q7C_2438 NC_017856.1 2427632 2428927 D PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 2427632..2428927 Methylophaga frappieri 12843563 YP_006294251.1 CDS Q7C_2439 NC_017856.1 2428963 2429826 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 2-hydroxy-3-oxopropionate reductase complement(2428963..2429826) Methylophaga frappieri 12843564 YP_006294252.1 CDS Q7C_2440 NC_017856.1 2429946 2431187 D PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase 2429946..2431187 Methylophaga frappieri 12843565 YP_006294253.1 CDS Q7C_2441 NC_017856.1 2431209 2431679 D PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; Ribonucleotide reductase transcriptional regulator NrdR 2431209..2431679 Methylophaga frappieri 12843566 YP_006294254.1 CDS Q7C_2442 NC_017856.1 2431743 2432840 D PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 2431743..2432840 Methylophaga frappieri 12843567 YP_006294255.1 CDS Q7C_2443 NC_017856.1 2432841 2433485 D PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 2432841..2433485 Methylophaga frappieri 12843568 YP_006294256.1 CDS Q7C_2444 NC_017856.1 2433482 2434591 D PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2433482..2434591 Methylophaga frappieri 12843569 YP_006294257.1 CDS Q7C_2445 NC_017856.1 2434594 2435745 D PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; Lipid-A-disaccharide synthase 2434594..2435745 Methylophaga frappieri 12843570 YP_006294258.1 CDS Q7C_2446 NC_017856.1 2435745 2436308 D PFAM: Ribonuclease HII; Ribonuclease HII 2435745..2436308 Methylophaga frappieri 12843571 YP_006294259.1 CDS Q7C_2447 NC_017856.1 2436369 2437730 D PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; Poly(A) polymerase 2436369..2437730 Methylophaga frappieri 12843572 YP_006294260.1 CDS Q7C_2448 NC_017856.1 2437730 2438218 D PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2437730..2438218 Methylophaga frappieri 12843573 YP_006294261.1 CDS Q7C_2449 NC_017856.1 2438215 2438874 D PFAM: Deoxynucleoside kinase; Deoxyadenosine kinase / Deoxyguanosine kinase 2438215..2438874 Methylophaga frappieri 12843574 YP_006294262.1 CDS Q7C_2450 NC_017856.1 2438871 2439668 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2438871..2439668 Methylophaga frappieri 12843575 YP_006294263.1 CDS Q7C_2451 NC_017856.1 2439668 2440528 D PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; Pantoate--beta-alanine ligase 2439668..2440528 Methylophaga frappieri 12843576 YP_006294264.1 CDS Q7C_2452 NC_017856.1 2440575 2440955 D PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase 2440575..2440955 Methylophaga frappieri 12843577 YP_006294265.1 CDS Q7C_2453 NC_017856.1 2441055 2442761 D PFAM: Acyltransferase; hemolysin 2441055..2442761 Methylophaga frappieri 12843578 YP_006294266.1 CDS Q7C_2454 NC_017856.1 2442758 2443132 R PFAM: SEC-C motif; hypothetical protein complement(2442758..2443132) Methylophaga frappieri 12843579 YP_006294267.1 CDS Q7C_2455 NC_017856.1 2443212 2444009 R protein yeeZ precursor complement(2443212..2444009) Methylophaga frappieri 12843580 YP_006294268.1 CDS Q7C_2456 NC_017856.1 2444110 2444640 D hypothetical protein 2444110..2444640 Methylophaga frappieri 12843581 YP_006294269.1 CDS Q7C_2457 NC_017856.1 2444716 2445753 D PFAM: CBS domain; Domain of unknown function DUF21; Magnesium and cobalt efflux protein CorC 2444716..2445753 Methylophaga frappieri 12843582 YP_006294270.1 CDS Q7C_2458 NC_017856.1 2445819 2446328 D PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 2445819..2446328 Methylophaga frappieri 12843583 YP_006294271.1 CDS Q7C_2459 NC_017856.1 2446325 2447011 R PFAM: Transglycosylase SLT domain; lytic transglycosylase complement(2446325..2447011) Methylophaga frappieri 12843584 YP_006294272.1 CDS Q7C_2460 NC_017856.1 2447015 2447476 R PFAM: Copper resistance protein D; hypothetical protein complement(2447015..2447476) Methylophaga frappieri 12843585 YP_006294273.1 CDS Q7C_2461 NC_017856.1 2447489 2449018 R PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fumarate hydratase class I, aerobic complement(2447489..2449018) Methylophaga frappieri 12843586 YP_006294274.1 CDS Q7C_2462 NC_017856.1 2449024 2450733 R PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase , bacterial type complement(2449024..2450733) Methylophaga frappieri 12843587 YP_006294275.1 CDS Q7C_2463 NC_017856.1 2450797 2451132 R PFAM: Macrophage migration inhibitory factor (MIF); ATLS1-like light-inducible protein complement(2450797..2451132) Methylophaga frappieri 12843588 YP_006294276.1 CDS Q7C_2464 NC_017856.1 2451145 2451600 R Periplasmic protein TonB, links inner and outer membranes complement(2451145..2451600) Methylophaga frappieri 12843589 YP_006294277.1 CDS Q7C_2465 NC_017856.1 2451580 2452470 D PFAM: RNA pseudouridylate synthase; Ribosomal large subunit pseudouridine synthase D 2451580..2452470 Methylophaga frappieri 12843590 YP_006294278.1 CDS Q7C_2466 NC_017856.1 2452478 2453746 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; DNA-damage-inducible protein F complement(2452478..2453746) Methylophaga frappieri 12843591 YP_006294279.1 CDS Q7C_2467 NC_017856.1 2453746 2453862 D hypothetical protein 2453746..2453862 Methylophaga frappieri 12843592 YP_006294280.1 CDS Q7C_2468 NC_017856.1 2453877 2455895 R PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; pyrophosphate-energized proton pump complement(2453877..2455895) Methylophaga frappieri 12843593 YP_006294281.1 CDS Q7C_2469 NC_017856.1 2456389 2456928 D PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 2456389..2456928 Methylophaga frappieri 12843594 YP_006294282.1 CDS Q7C_2470 NC_017856.1 2456996 2457841 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase 2456996..2457841 Methylophaga frappieri 12843595 YP_006294283.1 CDS Q7C_2471 NC_017856.1 2457901 2458212 D PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; glutaredoxin-related protein 2457901..2458212 Methylophaga frappieri 12843596 YP_006294284.1 CDS Q7C_2472 NC_017856.1 2458221 2458547 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2458221..2458547 Methylophaga frappieri 12843597 YP_006294285.1 CDS Q7C_2473 NC_017856.1 2458581 2460836 D PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA 2458581..2460836 Methylophaga frappieri 12843598 YP_006294286.1 CDS Q7C_2474 NC_017856.1 2460942 2461067 R hypothetical protein complement(2460942..2461067) Methylophaga frappieri 12843599 YP_006294287.1 CDS Q7C_2475 NC_017856.1 2461167 2461769 R PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; Cob(I)alamin adenosyltransferase complement(2461167..2461769) Methylophaga frappieri 12843600 YP_006294288.1 CDS Q7C_2476 NC_017856.1 2461795 2463735 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor; TonB-dependent receptor complement(2461795..2463735) Methylophaga frappieri 12843601 YP_006294289.1 CDS Q7C_2477 NC_017856.1 2464172 2465359 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; O-succinylhomoserine sulfhydrylase 2464172..2465359 Methylophaga frappieri 12843602 YP_006294290.1 CDS Q7C_2478 NC_017856.1 2465459 2467183 D PFAM: von Willebrand factor type A domain; TIGRFAM: TIGR03503 family protein; von Willebrand factor type A-like protein 2465459..2467183 Methylophaga frappieri 12843603 YP_006294291.1 CDS Q7C_2479 NC_017856.1 2467184 2469685 D hypothetical protein 2467184..2469685 Methylophaga frappieri 12843604 YP_006294292.1 CDS Q7C_2480 NC_017856.1 2469758 2471092 D PFAM: FAD dependent oxidoreductase; Malate:quinone oxidoreductase 2469758..2471092 Methylophaga frappieri 12843605 YP_006294293.1 CDS Q7C_2481 NC_017856.1 2471092 2471559 D PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB; transcription elongation factor GreB 2471092..2471559 Methylophaga frappieri 12843606 YP_006294294.1 CDS Q7C_2482 NC_017856.1 2471610 2471852 R hypothetical protein complement(2471610..2471852) Methylophaga frappieri 12843607 YP_006294295.1 CDS Q7C_2483 NC_017856.1 2471911 2472417 R PFAM: Nickel-containing superoxide dismutase; TIGRFAM: superoxide dismutase, Ni; nickel-containing superoxide dismutase complement(2471911..2472417) Methylophaga frappieri 12843608 YP_006294296.1 CDS Q7C_2484 NC_017856.1 2472439 2472642 R hypothetical protein complement(2472439..2472642) Methylophaga frappieri 12843609 YP_006294297.1 CDS Q7C_2485 NC_017856.1 2472639 2473157 R hypothetical protein complement(2472639..2473157) Methylophaga frappieri 12843610 YP_006294298.1 CDS Q7C_2486 NC_017856.1 2473357 2475447 D PFAM: TonB-dependent Receptor Plug Domain; outer membrane receptor protein 2473357..2475447 Methylophaga frappieri 12843611 YP_006294299.1 CDS Q7C_2487 NC_017856.1 2475528 2477750 R PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; Catalase / Peroxidase complement(2475528..2477750) Methylophaga frappieri 12843612 YP_006294300.1 CDS Q7C_2488 NC_017856.1 2477847 2478758 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Hydrogen peroxide-inducible genes activator complement(2477847..2478758) Methylophaga frappieri 12843613 YP_006294301.1 CDS Q7C_2489 NC_017856.1 2478923 2479303 D PFAM: MerC mercury resistance protein; MerC mercury resistance protein 2478923..2479303 Methylophaga frappieri 12843614 YP_006294302.1 CDS Q7C_2490 NC_017856.1 2479434 2480090 D PFAM: Protein of unknown function (DUF1826); hypothetical protein 2479434..2480090 Methylophaga frappieri 12843615 YP_006294303.1 CDS Q7C_2491 NC_017856.1 2480130 2480675 D PFAM: Protein of unknown function (DUF2796); zinc-binding protein 2480130..2480675 Methylophaga frappieri 12843616 YP_006294304.1 CDS Q7C_2492 NC_017856.1 2480682 2481146 D PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR 2480682..2481146 Methylophaga frappieri 12843617 YP_006294305.1 CDS Q7C_2493 NC_017856.1 2481149 2481712 R PFAM: Protein of unknown function (DUF3299); hypothetical protein complement(2481149..2481712) Methylophaga frappieri 12843618 YP_006294306.1 CDS Q7C_2494 NC_017856.1 2481721 2481885 R hypothetical protein complement(2481721..2481885) Methylophaga frappieri 12843619 YP_006294307.1 CDS Q7C_2495 NC_017856.1 2481913 2482446 D PFAM: ABC transporter; ABC transporter ATP-binding protein 2481913..2482446 Methylophaga frappieri 12843620 YP_006294308.1 CDS Q7C_2496 NC_017856.1 2482443 2483657 D PFAM: Predicted permease; antimicrobial peptide ABC transporter permease 2482443..2483657 Methylophaga frappieri 12843621 YP_006294309.1 CDS Q7C_2497 NC_017856.1 2483677 2484783 R PFAM: Glucose / Sorbosone dehydrogenase; PQQ-dependent oxidoreductase, gdhB family complement(2483677..2484783) Methylophaga frappieri 12843622 YP_006294310.1 CDS Q7C_2498 NC_017856.1 2484798 2486438 R PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein complement(2484798..2486438) Methylophaga frappieri 12843623 YP_006294311.1 CDS Q7C_2499 NC_017856.1 2486526 2489387 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase complement(2486526..2489387) Methylophaga frappieri 12843624 YP_006294312.1 CDS Q7C_2500 NC_017856.1 2489427 2489855 R PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi complement(2489427..2489855) Methylophaga frappieri 12843625 YP_006294313.1 CDS Q7C_2501 NC_017856.1 2489859 2491346 R PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; cytosol aminopeptidase complement(2489859..2491346) Methylophaga frappieri 12843626 YP_006294314.1 CDS Q7C_2502 NC_017856.1 2491486 2492562 D PFAM: Predicted permease YjgP/YjgQ family; permease 2491486..2492562 Methylophaga frappieri 12843627 YP_006294315.1 CDS Q7C_2503 NC_017856.1 2492564 2493625 D PFAM: Predicted permease YjgP/YjgQ family; Permease 2492564..2493625 Methylophaga frappieri 12843628 YP_006294316.1 CDS Q7C_2506 NC_017856.1 2493963 2494097 D hypothetical protein 2493963..2494097 Methylophaga frappieri 12843631 YP_006294317.1 CDS Q7C_2507 NC_017856.1 2494175 2496439 D PFAM: Organic solvent tolerance protein; OstA-like protein; Outer membrane protein Imp 2494175..2496439 Methylophaga frappieri 12843632 YP_006294318.1 CDS Q7C_2508 NC_017856.1 2496547 2497812 D PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; periplasmic chaperone for outer membrane proteins SurA 2496547..2497812 Methylophaga frappieri 12843633 YP_006294319.1 CDS Q7C_2509 NC_017856.1 2497812 2498807 D PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 2497812..2498807 Methylophaga frappieri 12843634 YP_006294320.1 CDS Q7C_2510 NC_017856.1 2498804 2499616 D PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; Dimethyladenosine transferase 2498804..2499616 Methylophaga frappieri 12843635 YP_006294321.1 CDS Q7C_2511 NC_017856.1 2499809 2500081 D PFAM: Bacterial DNA-binding protein; DNA-binding protein HU-beta 2499809..2500081 Methylophaga frappieri 12843636 YP_006294322.1 CDS Q7C_2514 NC_017856.1 2500335 2502233 D PFAM: PPIC-type PPIASE domain; Peptidyl-prolyl cis-trans isomerase ppiD 2500335..2502233 Methylophaga frappieri 12843641 YP_006294323.1 CDS Q7C_2515 NC_017856.1 2502266 2503483 R PFAM: Sodium:dicarboxylate symporter family; proton/glutamate symport protein / Sodium/glutamate symport protein complement(2502266..2503483) Methylophaga frappieri 12843642 YP_006294324.1 CDS Q7C_2516 NC_017856.1 2503564 2504352 R PFAM: short chain dehydrogenase; enoyl-ACP reductase complement(2503564..2504352) Methylophaga frappieri 12843643 YP_006294325.1 CDS Q7C_2517 NC_017856.1 2504474 2506618 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; Dipeptide-binding ABC transporter, periplasmic substrate-binding component 2504474..2506618 Methylophaga frappieri 12843644 YP_006294326.1 CDS Q7C_2518 NC_017856.1 2506700 2507473 D PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 2506700..2507473 Methylophaga frappieri 12843645 YP_006294327.1 CDS Q7C_2519 NC_017856.1 2507488 2508381 D PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB 2507488..2508381 Methylophaga frappieri 12843646 YP_006294328.1 CDS Q7C_2520 NC_017856.1 2508415 2509062 D PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 2508415..2509062 Methylophaga frappieri 12843647 YP_006294329.1 CDS Q7C_2521 NC_017856.1 2509078 2510148 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2509078..2510148 Methylophaga frappieri 12843649 YP_006294330.1 CDS Q7C_2522 NC_017856.1 2510172 2511194 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Aspartate-semialdehyde dehydrogenase 2510172..2511194 Methylophaga frappieri 12843651 YP_006294331.1 CDS Q7C_2523 NC_017856.1 2511263 2514040 D TIGRFAM: FimV C-terminal domain; FimV N-terminal domain; LysM domain-containing protein 2511263..2514040 Methylophaga frappieri 12843652 YP_006294332.1 CDS Q7C_2524 NC_017856.1 2514130 2514834 D PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A 2514130..2514834 Methylophaga frappieri 12843653 YP_006294333.1 CDS Q7C_2525 NC_017856.1 2514871 2515485 D PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 2514871..2515485 Methylophaga frappieri 12843654 YP_006294334.1 CDS Q7C_2526 NC_017856.1 2515478 2516698 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 2515478..2516698 Methylophaga frappieri 12843655 YP_006294335.1 CDS Q7C_2527 NC_017856.1 2516707 2517528 D PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 2516707..2517528 Methylophaga frappieri 12843656 YP_006294336.1 CDS Q7C_2528 NC_017856.1 2517681 2518145 D PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxyl transferase subunit beta 2517681..2518145 Methylophaga frappieri 12843657 YP_006294337.1 CDS Q7C_2529 NC_017856.1 2518145 2518405 D acetyl-coenzyme A carboxyl transferase subunit beta 2518145..2518405 Methylophaga frappieri 12843658 YP_006294338.1 CDS Q7C_2530 NC_017856.1 2518419 2519708 D PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; Dihydrofolate synthase / Folylpolyglutamate synthase 2518419..2519708 Methylophaga frappieri 12843659 YP_006294339.1 CDS Q7C_2531 NC_017856.1 2519700 2521532 R PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase complement(2519700..2521532) Methylophaga frappieri 12843660 YP_006294340.1 CDS Q7C_2532 NC_017856.1 2521517 2522803 R PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); long-chain fatty acid transport protein complement(2521517..2522803) Methylophaga frappieri 12843661 YP_006294341.1 CDS Q7C_2533 NC_017856.1 2522873 2523562 R PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine46-N7-)-methyltransferase complement(2522873..2523562) Methylophaga frappieri 12843662 YP_006294342.1 CDS Q7C_2534 NC_017856.1 2523881 2525704 D PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase; Phosphogluconate dehydratase 2523881..2525704 Methylophaga frappieri 12843663 YP_006294343.1 CDS Q7C_2535 NC_017856.1 2525720 2526352 D PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 4-hydroxy-2-ketovalerate aldolase 2525720..2526352 Methylophaga frappieri 12843664 YP_006294344.1 CDS Q7C_2536 NC_017856.1 2526419 2526622 R PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein complement(2526419..2526622) Methylophaga frappieri 12843665 YP_006294345.1 CDS Q7C_2537 NC_017856.1 2526855 2527214 R hypothetical protein complement(2526855..2527214) Methylophaga frappieri 12843666 YP_006294346.1 CDS Q7C_2538 NC_017856.1 2527249 2527392 R hypothetical protein complement(2527249..2527392) Methylophaga frappieri 12843667 YP_006294347.1 CDS Q7C_2539 NC_017856.1 2527347 2527622 R PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily complement(2527347..2527622) Methylophaga frappieri 12843668 YP_006294348.1 CDS Q7C_2540 NC_017856.1 2527745 2529430 R PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; NAD-dependent malic enzyme complement(2527745..2529430) Methylophaga frappieri 12843669 YP_006294349.1 CDS Q7C_2541 NC_017856.1 2529546 2529887 D hypothetical protein 2529546..2529887 Methylophaga frappieri 12843670 YP_006294350.1 CDS Q7C_2542 NC_017856.1 2530076 2531950 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter substrate-binding protein OppA 2530076..2531950 Methylophaga frappieri 12843671 YP_006294351.1 CDS Q7C_2543 NC_017856.1 2531956 2533338 D PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.1; Oligopeptide transport system permease OppB 2531956..2533338 Methylophaga frappieri 12843672 YP_006294352.1 CDS Q7C_2544 NC_017856.1 2533331 2534515 D PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.2; dipeptide transport system permease DppC 2533331..2534515 Methylophaga frappieri 12843673 YP_006294353.1 CDS Q7C_2545 NC_017856.1 2534512 2536167 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TC 3.A.1.5.1; Oligopeptide transport ATP-binding protein OppD 2534512..2536167 Methylophaga frappieri 12843674 YP_006294354.1 CDS Q7C_2546 NC_017856.1 2536160 2536789 R PFAM: GDSL-like Lipase/Acylhydrolase; Arylesterase precursor complement(2536160..2536789) Methylophaga frappieri 12843675 YP_006294355.1 CDS Q7C_2547 NC_017856.1 2536823 2537524 D PFAM: ABC transporter; ABC transporter ATP-binding protein 2536823..2537524 Methylophaga frappieri 12843676 YP_006294356.1 CDS Q7C_2548 NC_017856.1 2537521 2540007 D PFAM: Predicted permease; hypothetical protein 2537521..2540007 Methylophaga frappieri 12843677 YP_006294357.1 CDS Q7C_2549 NC_017856.1 2540066 2540296 D PFAM: Protein of unknown function (DUF2789); hypothetical protein 2540066..2540296 Methylophaga frappieri 12843678 YP_006294358.1 CDS Q7C_2550 NC_017856.1 2540341 2541048 D PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2540341..2541048 Methylophaga frappieri 12843679 YP_006294359.1 CDS Q7C_2551 NC_017856.1 2541161 2541607 D PFAM: Rickettsia 17 kDa surface antigen; 17 kDa surface antigen 2541161..2541607 Methylophaga frappieri 12843680 YP_006294360.1 CDS Q7C_2552 NC_017856.1 2541807 2541941 D hypothetical protein 2541807..2541941 Methylophaga frappieri 12843681 YP_006294361.1 CDS Q7C_2553 NC_017856.1 2542584 2542901 D hypothetical protein 2542584..2542901 Methylophaga frappieri 12843682 YP_006294362.1 CDS Q7C_2554 NC_017856.1 2542901 2544607 D iron-regulated membrane protein 2542901..2544607 Methylophaga frappieri 12843683 YP_006294363.1 CDS Q7C_2555 NC_017856.1 2544597 2544926 D PFAM: Protein of unknown function (DUF3325); hypothetical protein 2544597..2544926 Methylophaga frappieri 12843684 YP_006294364.1 CDS Q7C_2556 NC_017856.1 2544881 2545030 D hypothetical protein 2544881..2545030 Methylophaga frappieri 12843685 YP_006294365.1 CDS Q7C_2557 NC_017856.1 2545226 2549149 D PFAM: GAF domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 2545226..2549149 Methylophaga frappieri 12843686 YP_006294366.1 CDS Q7C_2558 NC_017856.1 2549321 2550970 D PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2549321..2550970 Methylophaga frappieri 12843687 YP_006294367.1 CDS Q7C_2559 NC_017856.1 2551005 2552408 R PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alanine carboxypeptidase complement(2551005..2552408) Methylophaga frappieri 12843688 YP_006294368.1 CDS Q7C_2560 NC_017856.1 2552873 2553088 D hypothetical protein 2552873..2553088 Methylophaga frappieri 12843689 YP_006294369.1 CDS Q7C_2561 NC_017856.1 2553163 2553486 D hypothetical protein 2553163..2553486 Methylophaga frappieri 12843690 YP_006294370.1 CDS Q7C_2562 NC_017856.1 2553555 2554841 D PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein, CzcC family 2553555..2554841 Methylophaga frappieri 12843691 YP_006294371.1 CDS Q7C_2563 NC_017856.1 2554846 2556063 D Co/Zn/Cd efflux system membrane fusion protein 2554846..2556063 Methylophaga frappieri 12843692 YP_006294372.1 CDS Q7C_2564 NC_017856.1 2556073 2559210 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA 2556073..2559210 Methylophaga frappieri 12843693 YP_006294373.1 CDS Q7C_2565 NC_017856.1 2559226 2559795 D PFAM: Domain of unknown function DUF; Integral membrane protein 2559226..2559795 Methylophaga frappieri 12843694 YP_006294374.1 CDS Q7C_2566 NC_017856.1 2559876 2560427 D PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme 2559876..2560427 Methylophaga frappieri 12843695 YP_006294375.1 CDS Q7C_2567 NC_017856.1 2560541 2561455 D PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 2560541..2561455 Methylophaga frappieri 12843696 YP_006294376.1 CDS Q7C_2568 NC_017856.1 2561462 2562841 R PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA complement(2561462..2562841) Methylophaga frappieri 12843697 YP_006294377.1 CDS Q7C_2569 NC_017856.1 2562838 2563008 R hypothetical protein complement(2562838..2563008) Methylophaga frappieri 12843698 YP_006294378.1 CDS Q7C_2570 NC_017856.1 2563061 2563546 D hypothetical protein 2563061..2563546 Methylophaga frappieri 12843699 YP_006294379.1 CDS Q7C_2571 NC_017856.1 2563567 2564295 R PFAM: Dienelactone hydrolase family; Dienelactone hydrolase and related enzyme complement(2563567..2564295) Methylophaga frappieri 12843700 YP_006294380.1 CDS Q7C_2572 NC_017856.1 2564374 2564589 R hypothetical protein complement(2564374..2564589) Methylophaga frappieri 12843701 YP_006294381.1 CDS Q7C_2573 NC_017856.1 2564760 2565377 D hypothetical protein 2564760..2565377 Methylophaga frappieri 12843702 YP_006294382.1 CDS Q7C_2574 NC_017856.1 2565364 2566608 D hypothetical protein 2565364..2566608 Methylophaga frappieri 12843703 YP_006294383.1 CDS Q7C_2575 NC_017856.1 2566621 2568039 D hypothetical protein 2566621..2568039 Methylophaga frappieri 12843704 YP_006294384.1 CDS Q7C_2576 NC_017856.1 2568089 2570032 D PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain; hypothetical protein 2568089..2570032 Methylophaga frappieri 12843705 YP_006294385.1 CDS Q7C_2577 NC_017856.1 2570032 2570172 D hypothetical protein 2570032..2570172 Methylophaga frappieri 12843706 YP_006294386.1 CDS Q7C_2578 NC_017856.1 2570173 2570934 D PFAM: MotA/TolQ/ExbB proton channel family; biopolymer transport protein, ExbB family 2570173..2570934 Methylophaga frappieri 12843707 YP_006294387.1 CDS Q7C_2579 NC_017856.1 2570941 2571999 D Secreted protein, containing von Willebrand factor (vWF) type A domain 2570941..2571999 Methylophaga frappieri 12843708 YP_006294388.1 CDS Q7C_2580 NC_017856.1 2571996 2572949 D Secreted protein, containing von Willebrand factor (vWF) type A domain 2571996..2572949 Methylophaga frappieri 12843709 YP_006294389.1 CDS Q7C_2581 NC_017856.1 2573235 2574047 D hypothetical protein 2573235..2574047 Methylophaga frappieri 12843710 YP_006294390.1 CDS Q7C_2582 NC_017856.1 2574277 2576484 D PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family; bacteriocin/lantibiotic exporters peptidase domain-containing protein 2574277..2576484 Methylophaga frappieri 12843711 YP_006294391.1 CDS Q7C_2583 NC_017856.1 2576481 2577881 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein 2576481..2577881 Methylophaga frappieri 12843712 YP_006294392.1 CDS Q7C_2584 NC_017856.1 2578241 2578723 D hypothetical protein 2578241..2578723 Methylophaga frappieri 12843713 YP_006294393.1 CDS Q7C_2585 NC_017856.1 2578723 2586876 D PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain; alkaline phosphatase 2578723..2586876 Methylophaga frappieri 12843714 YP_006294394.1 CDS Q7C_2586 NC_017856.1 2587112 2587237 R hypothetical protein complement(2587112..2587237) Methylophaga frappieri 12843715 YP_006294395.1 CDS Q7C_2587 NC_017856.1 2587236 2588660 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2587236..2588660 Methylophaga frappieri 12843716 YP_006294396.1 CDS Q7C_2588 NC_017856.1 2588772 2589515 R PFAM: Dienelactone hydrolase family; 1: dienelactone hydrolase complement(2588772..2589515) Methylophaga frappieri 12843717 YP_006294397.1 CDS Q7C_2589 NC_017856.1 2589622 2590047 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 2589622..2590047 Methylophaga frappieri 12843718 YP_006294398.1 CDS Q7C_2590 NC_017856.1 2590109 2590252 R PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 complement(2590109..2590252) Methylophaga frappieri 12843719 YP_006294399.1 CDS Q7C_2591 NC_017856.1 2590271 2590516 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(2590271..2590516) Methylophaga frappieri 12843720 YP_006294400.1 CDS Q7C_2592 NC_017856.1 2590690 2591856 D PFAM: Major Facilitator Superfamily; MFS permease 2590690..2591856 Methylophaga frappieri 12843721 YP_006294401.1 CDS Q7C_2593 NC_017856.1 2591889 2592341 R hypothetical protein complement(2591889..2592341) Methylophaga frappieri 12843722 YP_006294402.1 CDS Q7C_2594 NC_017856.1 2592494 2593279 R PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; Zn-finger domain-containing protein (topoisomerase type I-like) complement(2592494..2593279) Methylophaga frappieri 12843723 YP_006294403.1 CDS Q7C_2595 NC_017856.1 2593448 2593639 D hypothetical protein 2593448..2593639 Methylophaga frappieri 12843724 YP_006294404.1 CDS Q7C_2596 NC_017856.1 2594087 2595721 D PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 2594087..2595721 Methylophaga frappieri 12843725 YP_006294405.1 CDS Q7C_2597 NC_017856.1 2595811 2596101 R PFAM: Protein of unknown function (DUF3144); hypothetical protein complement(2595811..2596101) Methylophaga frappieri 12843726 YP_006294406.1 CDS Q7C_2598 NC_017856.1 2596138 2596488 R PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily complement(2596138..2596488) Methylophaga frappieri 12843727 YP_006294407.1 CDS Q7C_2599 NC_017856.1 2596648 2596821 R hypothetical protein complement(2596648..2596821) Methylophaga frappieri 12843728 YP_006294408.1 CDS Q7C_2600 NC_017856.1 2596980 2597312 R PFAM: Transposase IS200 like; transposase complement(2596980..2597312) Methylophaga frappieri 12843729 YP_006294409.1 CDS Q7C_2601 NC_017856.1 2597688 2597816 R hypothetical protein complement(2597688..2597816) Methylophaga frappieri 12843730 YP_006294410.1 CDS Q7C_2602 NC_017856.1 2598432 2600066 D PFAM: Trypsin; V8-like Glu-specific endopeptidase 2598432..2600066 Methylophaga frappieri 12843731 YP_006294411.1 CDS Q7C_2603 NC_017856.1 2600399 2600602 R hypothetical protein complement(2600399..2600602) Methylophaga frappieri 12843732 YP_006294412.1 CDS Q7C_2604 NC_017856.1 2601279 2601683 R hypothetical protein complement(2601279..2601683) Methylophaga frappieri 12843733 YP_006294413.1 CDS Q7C_2605 NC_017856.1 2601894 2602094 R hypothetical protein complement(2601894..2602094) Methylophaga frappieri 12843734 YP_006294414.1 CDS Q7C_2606 NC_017856.1 2602444 2603241 R PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2602444..2603241) Methylophaga frappieri 12843735 YP_006294415.1 CDS Q7C_2607 NC_017856.1 2603333 2604604 R PFAM: Trypsin; V8-like Glu-specific endopeptidase complement(2603333..2604604) Methylophaga frappieri 12843736 YP_006294416.1 CDS Q7C_2608 NC_017856.1 2605226 2606797 D adenylate cyclase 2605226..2606797 Methylophaga frappieri 12843737 YP_006294417.1 CDS Q7C_2609 NC_017856.1 2606828 2607094 D hypothetical protein 2606828..2607094 Methylophaga frappieri 12843738 YP_006294418.1 CDS Q7C_2610 NC_017856.1 2607095 2607223 R hypothetical protein complement(2607095..2607223) Methylophaga frappieri 12843739 YP_006294419.1 CDS Q7C_2611 NC_017856.1 2607762 2608115 D hypothetical protein 2607762..2608115 Methylophaga frappieri 12843740 YP_006294420.1 CDS Q7C_2612 NC_017856.1 2608112 2608921 D hypothetical protein 2608112..2608921 Methylophaga frappieri 12843741 YP_006294421.1 CDS Q7C_2613 NC_017856.1 2609244 2610539 D hypothetical protein 2609244..2610539 Methylophaga frappieri 12843742 YP_006294422.1 CDS Q7C_2614 NC_017856.1 2610612 2611382 D hypothetical protein 2610612..2611382 Methylophaga frappieri 12843743 YP_006294423.1 CDS Q7C_2615 NC_017856.1 2611394 2613034 D hypothetical protein 2611394..2613034 Methylophaga frappieri 12843744 YP_006294424.1 CDS Q7C_2616 NC_017856.1 2613692 2614384 R PFAM: Integrase core domain; ISxac3 transposase complement(2613692..2614384) Methylophaga frappieri 12843745 YP_006294425.1 CDS Q7C_2617 NC_017856.1 2614561 2614860 R PFAM: Transposase; Mobile element protein complement(2614561..2614860) Methylophaga frappieri 12843746 YP_006294426.1 CDS Q7C_2618 NC_017856.1 2615003 2615728 R hypothetical protein complement(2615003..2615728) Methylophaga frappieri 12843747 YP_006294427.1 CDS Q7C_2619 NC_017856.1 2616212 2617939 R PFAM: Ubiquitin-conjugating enzyme; ThiF family; dinucleotide-utilizing protein complement(2616212..2617939) Methylophaga frappieri 12843748 YP_006294428.1 CDS Q7C_2620 NC_017856.1 2617944 2619056 R hypothetical protein complement(2617944..2619056) Methylophaga frappieri 12843749 YP_006294429.1 CDS Q7C_2621 NC_017856.1 2619047 2620219 R PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta complement(2619047..2620219) Methylophaga frappieri 12843750 YP_006294430.1 CDS Q7C_2622 NC_017856.1 2620216 2623083 R PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleotide reductase subunit alpha complement(2620216..2623083) Methylophaga frappieri 12843751 YP_006294431.1 CDS Q7C_2623 NC_017856.1 2623385 2623912 R hypothetical protein complement(2623385..2623912) Methylophaga frappieri 12843752 YP_006294432.1 CDS Q7C_2624 NC_017856.1 2624050 2626200 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(2624050..2626200) Methylophaga frappieri 12843753 YP_006294433.1 CDS Q7C_2625 NC_017856.1 2626360 2626827 R PFAM: AhpC/TSA family; Thiol peroxidase, Bcp-type complement(2626360..2626827) Methylophaga frappieri 12843754 YP_006294434.1 CDS Q7C_2626 NC_017856.1 2626941 2627831 D PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; Dihydrodipicolinate synthase 2626941..2627831 Methylophaga frappieri 12843755 YP_006294435.1 CDS Q7C_2627 NC_017856.1 2627824 2628888 D PFAM: NlpB/DapX lipoprotein; Outer membrane protein NlpB 2627824..2628888 Methylophaga frappieri 12843756 YP_006294436.1 CDS Q7C_2628 NC_017856.1 2628888 2629655 D PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 2628888..2629655 Methylophaga frappieri 12843757 YP_006294437.1 CDS Q7C_2629 NC_017856.1 2629667 2630377 D PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; Phosphoribosylaminoimidazole-succinocarboxamide synthase 2629667..2630377 Methylophaga frappieri 12843758 YP_006294438.1 CDS Q7C_2630 NC_017856.1 2630414 2631787 R PFAM: Uncharacterized ACR (DUF711); hypothetical protein complement(2630414..2631787) Methylophaga frappieri 12843759 YP_006294439.1 CDS Q7C_2631 NC_017856.1 2631809 2632375 R amino acid-binding ACT protein complement(2631809..2632375) Methylophaga frappieri 12843760 YP_006294440.1 CDS Q7C_2632 NC_017856.1 2632388 2633002 R PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; ADP-ribose pyrophosphatase complement(2632388..2633002) Methylophaga frappieri 12843761 YP_006294441.1 CDS Q7C_2633 NC_017856.1 2632999 2633751 R PFAM: Protein of unknown function (DUF3108); isoprenoid biosynthesis protein complement(2632999..2633751) Methylophaga frappieri 12843762 YP_006294442.1 CDS Q7C_2634 NC_017856.1 2633756 2634286 R PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylglycinamide formyltransferase complement(2633756..2634286) Methylophaga frappieri 12843763 YP_006294443.1 CDS Q7C_2635 NC_017856.1 2634331 2635392 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; Phosphoribosylformylglycinamidine cyclo-ligase complement(2634331..2635392) Methylophaga frappieri 12843764 YP_006294444.1 CDS Q7C_2636 NC_017856.1 2635450 2636490 D PFAM: Uncharacterized protein conserved in bacteria (DUF2066); hypothetical protein 2635450..2636490 Methylophaga frappieri 12843765 YP_006294445.1 CDS Q7C_2637 NC_017856.1 2636487 2637041 D PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2636487..2637041 Methylophaga frappieri 12843766 YP_006294446.1 CDS Q7C_2638 NC_017856.1 2637017 2638087 D PFAM: Domain of unknown function DUF20; permease often clustered with de novo purine synthesis 2637017..2638087 Methylophaga frappieri 12843767 YP_006294447.1 CDS Q7C_2639 NC_017856.1 2638094 2638783 D PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; Chromosomal replication initiator protein DnaA 2638094..2638783 Methylophaga frappieri 12843768 YP_006294448.1 CDS Q7C_2640 NC_017856.1 2638773 2639675 D Regulatory protein, RpfE type 2638773..2639675 Methylophaga frappieri 12843769 YP_006294449.1 CDS Q7C_2641 NC_017856.1 2639669 2641396 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; ssDNA-specific exonuclease RecJ 2639669..2641396 Methylophaga frappieri 12843770 YP_006294450.1 CDS Q7C_2642 NC_017856.1 2641443 2641826 D hypothetical protein 2641443..2641826 Methylophaga frappieri 12843771 YP_006294451.1 CDS Q7C_2643 NC_017856.1 2641835 2642218 D single-stranded-DNA-specific exonuclease RecJ 2641835..2642218 Methylophaga frappieri 12843772 YP_006294452.1 CDS Q7C_2644 NC_017856.1 2642647 2642775 D hypothetical protein 2642647..2642775 Methylophaga frappieri 12843773 YP_006294453.1 CDS Q7C_2645 NC_017856.1 2642858 2643493 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator complement(2642858..2643493) Methylophaga frappieri 12843774 YP_006294454.1 CDS Q7C_2646 NC_017856.1 2643525 2644874 R PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; sensor histidine kinase complement(2643525..2644874) Methylophaga frappieri 12843775 YP_006294455.1 CDS Q7C_2647 NC_017856.1 2645042 2645494 D hypothetical protein 2645042..2645494 Methylophaga frappieri 12843776 YP_006294456.1 CDS Q7C_2648 NC_017856.1 2645994 2646209 D hypothetical protein 2645994..2646209 Methylophaga frappieri 12843777 YP_006294457.1 CDS Q7C_2649 NC_017856.1 2646203 2648074 D PFAM: DEAD_2; ATP-dependent helicase DinG/Rad3 2646203..2648074 Methylophaga frappieri 12843778 YP_006294458.1 CDS Q7C_2650 NC_017856.1 2648122 2648400 R PFAM: PPIC-type PPIASE domain; Peptidyl-prolyl cis-trans isomerase ppiC complement(2648122..2648400) Methylophaga frappieri 12843779 YP_006294459.1 CDS Q7C_2651 NC_017856.1 2648433 2649113 R PFAM: DJ-1/PfpI family; ThiJ/PfpI family protein complement(2648433..2649113) Methylophaga frappieri 12843780 YP_006294460.1 CDS Q7C_2652 NC_017856.1 2649172 2650230 R PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type; Dihydroorotase complement(2649172..2650230) Methylophaga frappieri 12843781 YP_006294461.1 CDS Q7C_2653 NC_017856.1 2650402 2652144 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 2650402..2652144 Methylophaga frappieri 12843782 YP_006294462.1 CDS Q7C_2654 NC_017856.1 2652144 2652638 D PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; Acetolactate synthase small subunit 2652144..2652638 Methylophaga frappieri 12843783 YP_006294463.1 CDS Q7C_2655 NC_017856.1 2652671 2653690 D PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 2652671..2653690 Methylophaga frappieri 12843784 YP_006294464.1 CDS Q7C_2656 NC_017856.1 2653804 2654547 D PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 2653804..2654547 Methylophaga frappieri 12843785 YP_006294465.1 CDS Q7C_2657 NC_017856.1 2654630 2655046 D PFAM: DNA polymerase III psi subunit; DNA polymerase III psi subunit 2654630..2655046 Methylophaga frappieri 12843786 YP_006294466.1 CDS Q7C_2658 NC_017856.1 2655056 2655529 D PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S18p-alanine acetyltransferase 2655056..2655529 Methylophaga frappieri 12843787 YP_006294467.1 CDS Q7C_2659 NC_017856.1 2655611 2656192 D PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; Superoxide dismutase (Fe) 2655611..2656192 Methylophaga frappieri 12843788 YP_006294468.1 CDS Q7C_2660 NC_017856.1 2656341 2657540 D PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases; Acetylornithine aminotransferase 2656341..2657540 Methylophaga frappieri 12843789 YP_006294469.1 CDS Q7C_2661 NC_017856.1 2657542 2658438 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 2657542..2658438 Methylophaga frappieri 12843790 YP_006294470.1 CDS Q7C_2662 NC_017856.1 2658427 2659107 R PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(2658427..2659107) Methylophaga frappieri 12843791 YP_006294471.1 CDS Q7C_2663 NC_017856.1 2659113 2660087 R PFAM: Phosphotransferase enzyme family; phosphotransferase complement(2659113..2660087) Methylophaga frappieri 12843792 YP_006294472.1 CDS Q7C_2664 NC_017856.1 2660204 2660596 D hypothetical protein 2660204..2660596 Methylophaga frappieri 12843793 YP_006294473.1 CDS Q7C_2665 NC_017856.1 2660604 2661185 R PFAM: Maf-like protein; TIGRFAM: MAF protein; hypothetical protein complement(2660604..2661185) Methylophaga frappieri 12843794 YP_006294474.1 CDS Q7C_2666 NC_017856.1 2661192 2662826 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase complement(2661192..2662826) Methylophaga frappieri 12843795 YP_006294475.1 CDS Q7C_2667 NC_017856.1 2662963 2663544 D PFAM: Nuclease-related domain; nuclease-like protein 2662963..2663544 Methylophaga frappieri 12843796 YP_006294476.1 CDS Q7C_2668 NC_017856.1 2663550 2664497 D PFAM: 5'-nucleotidase; 5'-nucleotidase 2663550..2664497 Methylophaga frappieri 12843797 YP_006294477.1 CDS Q7C_2670 NC_017856.1 2664747 2666045 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; cell division trigger factor 2664747..2666045 Methylophaga frappieri 12843799 YP_006294478.1 CDS Q7C_2671 NC_017856.1 2666129 2666764 D PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 2666129..2666764 Methylophaga frappieri 12843800 YP_006294479.1 CDS Q7C_2672 NC_017856.1 2666792 2668063 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 2666792..2668063 Methylophaga frappieri 12843801 YP_006294480.1 CDS Q7C_2673 NC_017856.1 2668188 2670617 D PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La; ATP-dependent protease La 2668188..2670617 Methylophaga frappieri 12843802 YP_006294481.1 CDS Q7C_2674 NC_017856.1 2670635 2671372 D PFAM: Sporulation related domain; DedD protein 2670635..2671372 Methylophaga frappieri 12843803 YP_006294482.1 CDS Q7C_2675 NC_017856.1 2671474 2671962 D PFAM: Colicin V production protein; colicin V production protein 2671474..2671962 Methylophaga frappieri 12843804 YP_006294483.1 CDS Q7C_2676 NC_017856.1 2671986 2673494 D PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; Amidophosphoribosyltransferase 2671986..2673494 Methylophaga frappieri 12843805 YP_006294484.1 CDS Q7C_2677 NC_017856.1 2673537 2674055 D PFAM: Uncharacterized ACR, COG1399; hypothetical protein 2673537..2674055 Methylophaga frappieri 12843806 YP_006294485.1 CDS Q7C_2678 NC_017856.1 2674080 2674259 D PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 2674080..2674259 Methylophaga frappieri 12843807 YP_006294486.1 CDS Q7C_2679 NC_017856.1 2674271 2675290 D PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-ACP acyltransferase PlsX 2674271..2675290 Methylophaga frappieri 12843808 YP_006294487.1 CDS Q7C_2680 NC_017856.1 2675287 2676246 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase 2675287..2676246 Methylophaga frappieri 12843809 YP_006294488.1 CDS Q7C_2681 NC_017856.1 2676267 2677199 D PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; Malonyl CoA-acyl carrier protein transacylase 2676267..2677199 Methylophaga frappieri 12843810 YP_006294489.1 CDS Q7C_2682 NC_017856.1 2677202 2677945 D PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 2677202..2677945 Methylophaga frappieri 12843811 YP_006294490.1 CDS Q7C_2683 NC_017856.1 2678086 2678322 D PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2678086..2678322 Methylophaga frappieri 12843812 YP_006294491.1 CDS Q7C_2684 NC_017856.1 2678418 2679659 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase 2678418..2679659 Methylophaga frappieri 12843813 YP_006294492.1 CDS Q7C_2685 NC_017856.1 2679670 2680503 D PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; Aminodeoxychorismate lyase 2679670..2680503 Methylophaga frappieri 12843814 YP_006294493.1 CDS Q7C_2686 NC_017856.1 2680500 2681510 D PFAM: YceG-like family; TIGRFAM: hypothetical protein, YceG family; YceG-like protein 2680500..2681510 Methylophaga frappieri 12843815 YP_006294494.1 CDS Q7C_2687 NC_017856.1 2681507 2682133 D PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 2681507..2682133 Methylophaga frappieri 12843816 YP_006294495.1 CDS Q7C_2688 NC_017856.1 2682136 2683086 D TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' 2682136..2683086 Methylophaga frappieri 12843817 YP_006294496.1 CDS Q7C_2689 NC_017856.1 2683095 2683448 D PFAM: PilZ domain; type IV pilus assembly protein PilZ 2683095..2683448 Methylophaga frappieri 12843818 YP_006294497.1 CDS Q7C_2690 NC_017856.1 2683480 2684256 D PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 2683480..2684256 Methylophaga frappieri 12843819 YP_006294498.1 CDS Q7C_2691 NC_017856.1 2684259 2684888 D PFAM: GDSL-like Lipase/Acylhydrolase; lipase 2684259..2684888 Methylophaga frappieri 12843820 YP_006294499.1 CDS Q7C_2692 NC_017856.1 2685148 2686542 D PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator domain / Aspartate aminotransferase 2685148..2686542 Methylophaga frappieri 12843821 YP_006294500.1 CDS Q7C_2693 NC_017856.1 2686575 2687993 D PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG 2686575..2687993 Methylophaga frappieri 12843822 YP_006294501.1 CDS Q7C_2694 NC_017856.1 2687990 2689144 D PFAM: Protein of unknown function (DUF1228); MFS superfamily transporter 2687990..2689144 Methylophaga frappieri 12843823 YP_006294502.1 CDS Q7C_2695 NC_017856.1 2689153 2690139 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; Alcohol dehydrogenase complement(2689153..2690139) Methylophaga frappieri 12843824 YP_006294503.1 CDS Q7C_2696 NC_017856.1 2690150 2690782 R PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase II complement(2690150..2690782) Methylophaga frappieri 12843825 YP_006294504.1 CDS Q7C_2697 NC_017856.1 2690876 2691031 R hypothetical protein complement(2690876..2691031) Methylophaga frappieri 12843826 YP_006294505.1 CDS Q7C_2698 NC_017856.1 2691165 2692646 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M 2691165..2692646 Methylophaga frappieri 12843827 YP_006294506.1 CDS Q7C_2699 NC_017856.1 2692643 2693803 D PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 2692643..2693803 Methylophaga frappieri 12843828 YP_006294507.1 CDS Q7C_2700 NC_017856.1 2693833 2697285 D PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3559); IMG reference gene:2510782860_SP; type I restriction-modification system, restriction subunit R 2693833..2697285 Methylophaga frappieri 12843829 YP_006297530.1 CDS Q7C_2701 NC_017858.1 58 312 R hypothetical protein complement(58..312) Methylophaga frappieri 12848216 YP_006297531.1 CDS Q7C_2702 NC_017858.1 305 1378 R KlcB protein complement(305..1378) Methylophaga frappieri 12848217 YP_006297532.1 CDS Q7C_2703 NC_017858.1 1419 1853 R PFAM: Antirestriction protein; KlcA protein complement(1419..1853) Methylophaga frappieri 12848218 YP_006297533.1 CDS Q7C_2704 NC_017858.1 1975 2271 R hypothetical protein complement(1975..2271) Methylophaga frappieri 12848219 YP_006297534.1 CDS Q7C_2705 NC_017858.1 4021 5151 R PFAM: TrfA protein; TrfA2 complement(4021..5151) Methylophaga frappieri 12848220 YP_006297535.1 CDS Q7C_2706 NC_017858.1 5197 5544 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein complement(5197..5544) Methylophaga frappieri 12848221 YP_006297536.1 CDS Q7C_2707 NC_017858.1 5670 6026 D PFAM: Helix-turn-helix; conjugative transfer protein TrbA 5670..6026 Methylophaga frappieri 12848222 YP_006297537.1 CDS Q7C_2708 NC_017858.1 6278 7237 D PFAM: Type II/IV secretion system protein; TIGRFAM: P-type conjugative transfer ATPase TrbB; conjugative transfer protein TrbB 6278..7237 Methylophaga frappieri 12848223 YP_006297538.1 CDS Q7C_2709 NC_017858.1 7264 7689 D PFAM: TrbC/VIRB2 family; conjugative transfer protein TrbC 7264..7689 Methylophaga frappieri 12848224 YP_006297539.1 CDS Q7C_2710 NC_017858.1 7770 8003 D PFAM: Type IV secretory pathway, VirB3-like protein; conjugative transfer protein TrbD 7770..8003 Methylophaga frappieri 12848225 YP_006297540.1 CDS Q7C_2711 NC_017858.1 8000 10540 D PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; conjugative transfer protein TrbE 8000..10540 Methylophaga frappieri 12848226 YP_006297541.1 CDS Q7C_2712 NC_017858.1 10540 11322 D PFAM: VirB8 protein; conjugative transfer protein TrbF 10540..11322 Methylophaga frappieri 12848171 YP_006297542.1 CDS Q7C_2713 NC_017858.1 11340 12245 D PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; conjugative transfer protein TrbG 11340..12245 Methylophaga frappieri 12848172 YP_006297543.1 CDS Q7C_2714 NC_017858.1 12452 12721 D PFAM: Conjugal transfer protein TrbH; conjugative transfer protein TrbH 12452..12721 Methylophaga frappieri 12848173 YP_006297544.1 CDS Q7C_2715 NC_017858.1 12725 14152 D PFAM: Bacterial conjugation TrbI-like protein; conjugative transfer protein TrbI 12725..14152 Methylophaga frappieri 12848174 YP_006297545.1 CDS Q7C_2716 NC_017858.1 14180 14941 D PFAM: Type IV secretion system proteins; TIGRFAM: P-type conjugative transfer protein TrbJ; conjugative transfer protein TrbJ 14180..14941 Methylophaga frappieri 12848175 YP_006297546.1 CDS Q7C_2717 NC_017858.1 15029 15178 D hypothetical protein 15029..15178 Methylophaga frappieri 12848176 YP_006297547.1 CDS Q7C_2718 NC_017858.1 15190 15945 D PFAM: Etoposide-induced protein 2.4 (EI24); conjugative transfer protein TrbL 15190..15945 Methylophaga frappieri 12848177 YP_006297548.1 CDS Q7C_2719 NC_017858.1 16261 18309 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 16261..18309 Methylophaga frappieri 12848178 YP_006297549.1 CDS Q7C_2720 NC_017858.1 18371 18574 R PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase complement(18371..18574) Methylophaga frappieri 12848179 YP_006297550.1 CDS Q7C_2721 NC_017858.1 18826 20172 D PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL; conjugative transfer protein TrbL 18826..20172 Methylophaga frappieri 12848180 YP_006297551.1 CDS Q7C_2722 NC_017858.1 20454 21134 R hypothetical protein complement(20454..21134) Methylophaga frappieri 12848181 YP_006297552.1 CDS Q7C_2723 NC_017858.1 21165 21314 D conjugative transfer protein TrbN 21165..21314 Methylophaga frappieri 12848182 YP_006297553.1 CDS Q7C_2724 NC_017858.1 21311 22039 D PFAM: TraX protein; conjugative transfer protein TrbP 21311..22039 Methylophaga frappieri 12848183 YP_006297554.1 CDS Q7C_2725 NC_017858.1 22130 22249 R hypothetical protein complement(22130..22249) Methylophaga frappieri 12848184 YP_006297555.1 CDS Q7C_2726 NC_017858.1 22255 22368 D hypothetical protein 22255..22368 Methylophaga frappieri 12848185 YP_006297556.1 CDS Q7C_2727 NC_017858.1 22497 22766 D hypothetical protein 22497..22766 Methylophaga frappieri 12848186 YP_006297557.1 CDS Q7C_2728 NC_017858.1 23081 23200 D hypothetical protein 23081..23200 Methylophaga frappieri 12848187 YP_006297558.1 CDS Q7C_2729 NC_017858.1 23242 23388 D hypothetical protein 23242..23388 Methylophaga frappieri 12848188 YP_006297559.1 CDS Q7C_2730 NC_017858.1 23385 24353 D hypothetical protein 23385..24353 Methylophaga frappieri 12848189 YP_006297560.1 CDS Q7C_2731 NC_017858.1 24363 24689 D DNA-binding protein 24363..24689 Methylophaga frappieri 12848190 YP_006297561.1 CDS Q7C_2732 NC_017858.1 24748 26049 D PFAM: Transposase DDE domain; transposase, IS4 family protein 24748..26049 Methylophaga frappieri 12848191 YP_006297562.1 CDS Q7C_2733 NC_017858.1 26145 26309 D hypothetical protein 26145..26309 Methylophaga frappieri 12848192 YP_006297563.1 CDS Q7C_2734 NC_017858.1 26329 26787 R PFAM: Resolvase, N terminal domain; resolvase complement(26329..26787) Methylophaga frappieri 12848193 YP_006297564.1 CDS Q7C_2735 NC_017858.1 27221 27469 R hypothetical protein complement(27221..27469) Methylophaga frappieri 12848194 YP_006297565.1 CDS Q7C_2736 NC_017858.1 27607 28470 D PFAM: Exonuclease; DNA polymerase III, epsilon subunit-related 3'-5' exonuclease 27607..28470 Methylophaga frappieri 12848195 YP_006297566.1 CDS Q7C_2737 NC_017858.1 28514 31675 R PFAM: Toprim domain; Domain of unknown function (DUF1738); DNA primase complement(28514..31675) Methylophaga frappieri 12848196 YP_006297567.1 CDS Q7C_2738 NC_017858.1 31679 31921 R Protein traD complement(31679..31921) Methylophaga frappieri 12848197 YP_006297568.1 CDS Q7C_2739 NC_017858.1 31927 33987 R PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III complement(31927..33987) Methylophaga frappieri 12848198 YP_006297569.1 CDS Q7C_2740 NC_017858.1 34007 34543 R PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF; TraF protein of DNA transfer system complement(34007..34543) Methylophaga frappieri 12848199 YP_006297570.1 CDS Q7C_2741 NC_017858.1 34540 36447 R PFAM: TraG/TraD family; protein TraG complement(34540..36447) Methylophaga frappieri 12848200 YP_006297571.1 CDS Q7C_2742 NC_017858.1 36444 38711 R PFAM: Relaxase/Mobilisation nuclease domain; TraI protein complement(36444..38711) Methylophaga frappieri 12848201 YP_006297572.1 CDS Q7C_2743 NC_017858.1 38764 39135 R TraJ protein complement(38764..39135) Methylophaga frappieri 12848202 YP_006297573.1 CDS Q7C_2744 NC_017858.1 39514 39951 D OriT-binding protein, TraK 39514..39951 Methylophaga frappieri 12848203 YP_006297574.1 CDS Q7C_2745 NC_017858.1 39951 40676 D PFAM: Anion-transporting ATPase; TraL protein 39951..40676 Methylophaga frappieri 12848204 YP_006297575.1 CDS Q7C_2746 NC_017858.1 40676 41113 D PFAM: Transcriptional activator TraM; TraM 40676..41113 Methylophaga frappieri 12848205 YP_006297576.1 CDS Q7C_2747 NC_017858.1 41167 42489 R PFAM: Phosphoribosyl transferase domain; TraN protein complement(41167..42489) Methylophaga frappieri 12848206 YP_006297577.1 CDS Q7C_2748 NC_017858.1 42517 42738 R upf54.8 complement(42517..42738) Methylophaga frappieri 12848207 YP_006297578.1 CDS Q7C_2749 NC_017858.1 43022 43999 R PFAM: Plasmid replication region DNA-binding N-term; KfrA complement(43022..43999) Methylophaga frappieri 12848208 YP_006297579.1 CDS Q7C_2750 NC_017858.1 44143 44265 R hypothetical protein complement(44143..44265) Methylophaga frappieri 12848209 YP_006297580.1 CDS Q7C_2751 NC_017858.1 44367 45389 R PFAM: ParB-like nuclease domain; KorB C-terminal beta-barrel domain; KorB domain; TIGRFAM: ParB-like partition proteins; chromosome partitioning ATPase complement(44367..45389) Methylophaga frappieri 12848210 YP_006297581.1 CDS Q7C_2752 NC_017858.1 45386 46144 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome (plasmid) partitioning protein ParA complement(45386..46144) Methylophaga frappieri 12848211 YP_006297582.1 CDS Q7C_2753 NC_017858.1 46144 46440 R KorA protein complement(46144..46440) Methylophaga frappieri 12848212 YP_006297583.1 CDS Q7C_2754 NC_017858.1 46559 46909 R KleE protein complement(46559..46909) Methylophaga frappieri 12848213 YP_006297584.1 CDS Q7C_2755 NC_017858.1 47043 47279 R KleA protein complement(47043..47279) Methylophaga frappieri 12848214 YP_006297585.1 CDS Q7C_2756 NC_017858.1 47430 47684 R IMG reference gene:2510785556_SP; KorC complement(47430..47684) Methylophaga frappieri 12848215 Q7C_61 tRNA Q7C_61 NC_017856.1 60563 60649 D tRNA-Ser 60563..60649 Methylophaga frappieri 12842642 Q7C_225 tRNA Q7C_225 NC_017856.1 223064 223151 D tRNA-Ser 223064..223151 Methylophaga frappieri 12842940 Q7C_226 tRNA Q7C_226 NC_017856.1 223214 223287 D tRNA-Arg 223214..223287 Methylophaga frappieri 12842941 Q7C_316 tRNA Q7C_316 NC_017856.1 314477 314558 D tRNA-Leu 314477..314558 Methylophaga frappieri 12844645 Q7C_349 tRNA Q7C_349 NC_017856.1 344180 344253 R tRNA-Pro complement(344180..344253) Methylophaga frappieri 12844678 Q7C_360 tRNA Q7C_360 NC_017856.1 355241 355314 R tRNA-Val complement(355241..355314) Methylophaga frappieri 12844689 Q7C_363 tRNA Q7C_363 NC_017856.1 358698 358770 D tRNA-Asn 358698..358770 Methylophaga frappieri 12844692 Q7C_581 tRNA Q7C_581 NC_017856.1 638721 638794 R tRNA-Met complement(638721..638794) Methylophaga frappieri 12844909 Q7C_620 tRNA Q7C_620 NC_017856.1 674674 674761 D tRNA-Ser 674674..674761 Methylophaga frappieri 12844948 Q7C_773 tRNA Q7C_773 NC_017856.1 830928 831001 R tRNA-Arg complement(830928..831001) Methylophaga frappieri 12843111 Q7C_774 tRNA Q7C_774 NC_017856.1 831044 831117 R tRNA-Pro complement(831044..831117) Methylophaga frappieri 12843112 Q7C_993 tRNA Q7C_993 NC_017856.1 1025166 1025238 R tRNA-Ala complement(1025166..1025238) Methylophaga frappieri 12843330 Q7C_994 tRNA Q7C_994 NC_017856.1 1025526 1025599 R tRNA-Ile complement(1025526..1025599) Methylophaga frappieri 12843331 Q7C_1024 tRNA Q7C_1024 NC_017856.1 1057892 1057975 R tRNA-Leu complement(1057892..1057975) Methylophaga frappieri 12843361 Q7C_1026 tRNA Q7C_1026 NC_017856.1 1060284 1060356 D tRNA-His 1060284..1060356 Methylophaga frappieri 12843363 Q7C_1028 tRNA Q7C_1028 NC_017856.1 1061332 1061404 D tRNA-Thr 1061332..1061404 Methylophaga frappieri 12843365 Q7C_1083 tRNA Q7C_1083 NC_017856.1 1115539 1115609 R tRNA-Cys complement(1115539..1115609) Methylophaga frappieri 12843419 Q7C_1084 tRNA Q7C_1084 NC_017856.1 1115678 1115750 R tRNA-Gly complement(1115678..1115750) Methylophaga frappieri 12843420 Q7C_1213 tRNA Q7C_1213 NC_017856.1 1241348 1241429 R tRNA-Leu complement(1241348..1241429) Methylophaga frappieri 12842456 Q7C_1440 tRNA Q7C_1440 NC_017856.1 1457271 1457344 R tRNA-Arg complement(1457271..1457344) Methylophaga frappieri 12842873 Q7C_1621 tRNA Q7C_1621 NC_017856.1 1626221 1626294 D tRNA-Arg 1626221..1626294 Methylophaga frappieri 12844304 Q7C_1673 tRNA Q7C_1673 NC_017856.1 1682229 1682301 D tRNA-Phe 1682229..1682301 Methylophaga frappieri 12844356 Q7C_1720 tRNA Q7C_1720 NC_017856.1 1725342 1725414 R tRNA-Ala complement(1725342..1725414) Methylophaga frappieri 12844403 Q7C_1721 tRNA Q7C_1721 NC_017856.1 1725702 1725775 R tRNA-Ile complement(1725702..1725775) Methylophaga frappieri 12844404 Q7C_1723 tRNA Q7C_1723 NC_017856.1 1727632 1727704 R tRNA-Lys complement(1727632..1727704) Methylophaga frappieri 12844406 Q7C_1952 tRNA Q7C_1952 NC_017856.1 1969222 1969295 R tRNA-Asp complement(1969222..1969295) Methylophaga frappieri 12843851 Q7C_2023 tRNA Q7C_2023 NC_017856.1 2034754 2034827 D tRNA-Met 2034754..2034827 Methylophaga frappieri 12843922 Q7C_2089 tRNA Q7C_2089 NC_017856.1 2094812 2094895 R tRNA-Leu complement(2094812..2094895) Methylophaga frappieri 12843988 Q7C_2099 tRNA Q7C_2099 NC_017856.1 2104493 2104564 D tRNA-Gln 2104493..2104564 Methylophaga frappieri 12843998 Q7C_2105 tRNA Q7C_2105 NC_017856.1 2109275 2109348 D tRNA-Met 2109275..2109348 Methylophaga frappieri 12844004 Q7C_2379 tRNA Q7C_2379 NC_017856.1 2382263 2382344 D tRNA-Tyr 2382263..2382344 Methylophaga frappieri 12843499 Q7C_2380 tRNA Q7C_2380 NC_017856.1 2382372 2382442 D tRNA-Gly 2382372..2382442 Methylophaga frappieri 12843500 Q7C_2381 tRNA Q7C_2381 NC_017856.1 2382464 2382536 D tRNA-Thr 2382464..2382536 Methylophaga frappieri 12843501 Q7C_2383 tRNA Q7C_2383 NC_017856.1 2383877 2383949 D tRNA-Trp 2383877..2383949 Methylophaga frappieri 12843503 Q7C_2425 tRNA Q7C_2425 NC_017856.1 2415605 2415678 D tRNA-Ile 2415605..2415678 Methylophaga frappieri 12843545 Q7C_2426 tRNA Q7C_2426 NC_017856.1 2415966 2416038 D tRNA-Ala 2415966..2416038 Methylophaga frappieri 12843546 Q7C_2504 tRNA Q7C_2504 NC_017856.1 2493743 2493815 R tRNA-Glu complement(2493743..2493815) Methylophaga frappieri 12843629 Q7C_2505 tRNA Q7C_2505 NC_017856.1 2493840 2493912 R tRNA-Ala complement(2493840..2493912) Methylophaga frappieri 12843630 Q7C_2512 tRNA Q7C_2512 NC_017856.1 2500093 2500165 D tRNA-Val 2500093..2500165 Methylophaga frappieri 12843637 Q7C_2513 tRNA Q7C_2513 NC_017856.1 2500179 2500252 D tRNA-Asp 2500179..2500252 Methylophaga frappieri 12843639 Q7C_2669 tRNA Q7C_2669 NC_017856.1 2664602 2664683 D tRNA-Leu 2664602..2664683 Methylophaga frappieri 12843798 Q7C_991 rRNA Q7C_991 NC_017856.1 1021883 1022001 R 5S ribosomal RNA complement(1021883..1022001) Methylophaga frappieri 12843328 Q7C_992 rRNA Q7C_992 NC_017856.1 1022058 1024970 R 23S ribosomal RNA complement(1022058..1024970) Methylophaga frappieri 12843329 Q7C_995 rRNA Q7C_995 NC_017856.1 1025684 1027173 R 16S ribosomal RNA complement(1025684..1027173) Methylophaga frappieri 12843332 Q7C_1718 rRNA Q7C_1718 NC_017856.1 1722097 1722214 R 5S ribosomal RNA complement(1722097..1722214) Methylophaga frappieri 12844401 Q7C_1719 rRNA Q7C_1719 NC_017856.1 1722269 1725146 R 23S ribosomal RNA complement(1722269..1725146) Methylophaga frappieri 12844402 Q7C_1722 rRNA Q7C_1722 NC_017856.1 1725860 1727346 R 16S ribosomal RNA complement(1725860..1727346) Methylophaga frappieri 12844405 Q7C_2424 rRNA Q7C_2424 NC_017856.1 2414029 2415520 D 16S ribosomal RNA 2414029..2415520 Methylophaga frappieri 12843544 Q7C_2427 rRNA Q7C_2427 NC_017856.1 2416234 2419146 D 23S ribosomal RNA 2416234..2419146 Methylophaga frappieri 12843547 Q7C_2428 rRNA Q7C_2428 NC_017856.1 2419203 2419321 D 5S ribosomal RNA 2419203..2419321 Methylophaga frappieri 12843548