-- dump date 20140619_145232 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_006291873.1 387128983 12843555 134..523 1 NC_017856.1 PFAM: Pterin 4 alpha carbinolamine dehydratase; Pterin-4-alpha-carbinolamine dehydratase 523 12843555 Q7C_1 Methylophaga frappieri Pterin-4-alpha-carbinolamine dehydratase YP_006291873.1 134 D 754477 CDS YP_006291874.1 387128984 12843557 537..743 1 NC_017856.1 hypothetical protein 743 12843557 Q7C_2 Methylophaga frappieri hypothetical protein YP_006291874.1 537 D 754477 CDS YP_006291875.1 387128985 12843559 746..1132 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2237); hypothetical protein 1132 12843559 Q7C_3 Methylophaga frappieri hypothetical protein YP_006291875.1 746 D 754477 CDS YP_006291876.1 387128986 12843561 complement(1139..3067) 1 NC_017856.1 PFAM: Type III restriction enzyme, res subunit; DEAD_2; DinG family ATP-dependent helicase YoaA 3067 12843561 Q7C_4 Methylophaga frappieri DinG family ATP-dependent helicase YoaA YP_006291876.1 1139 R 754477 CDS YP_006291877.1 387128987 12843638 complement(3067..3963) 1 NC_017856.1 PFAM: E3 Ubiquitin ligase; E3 Ubiquitin ligase 3963 12843638 Q7C_5 Methylophaga frappieri E3 Ubiquitin ligase YP_006291877.1 3067 R 754477 CDS YP_006291878.1 387128988 12843640 complement(3963..4538) 1 NC_017856.1 PFAM: LemA family; LemA 4538 12843640 Q7C_6 Methylophaga frappieri LemA YP_006291878.1 3963 R 754477 CDS YP_006291879.1 387128989 12843648 complement(4567..5049) 1 NC_017856.1 hypothetical protein 5049 12843648 Q7C_7 Methylophaga frappieri hypothetical protein YP_006291879.1 4567 R 754477 CDS YP_006291880.1 387128990 12843650 complement(5213..5818) 1 NC_017856.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme 5818 12843650 Q7C_8 Methylophaga frappieri Formaldehyde activating enzyme YP_006291880.1 5213 R 754477 CDS YP_006291881.1 387128991 12843553 5890..6279 1 NC_017856.1 PFAM: Bacterial-like globin; hypothetical protein 6279 12843553 Q7C_9 Methylophaga frappieri hypothetical protein YP_006291881.1 5890 D 754477 CDS YP_006291882.1 387128992 12842591 6282..7028 1 NC_017856.1 PFAM: Probable molybdopterin binding domain; molybdopterin binding domain-containing protein 7028 12842591 Q7C_10 Methylophaga frappieri molybdopterin binding domain-containing protein YP_006291882.1 6282 D 754477 CDS YP_006291883.1 387128993 12842592 complement(7013..7927) 1 NC_017856.1 PFAM: Membrane transport protein; permease 7927 12842592 Q7C_11 Methylophaga frappieri permease YP_006291883.1 7013 R 754477 CDS YP_006291884.1 387128994 12842593 complement(7947..8096) 1 NC_017856.1 hypothetical protein 8096 12842593 Q7C_12 Methylophaga frappieri hypothetical protein YP_006291884.1 7947 R 754477 CDS YP_006291885.1 387128995 12842594 8119..10017 1 NC_017856.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; hypothetical protein 10017 12842594 Q7C_13 Methylophaga frappieri hypothetical protein YP_006291885.1 8119 D 754477 CDS YP_006291886.1 387128996 12842595 10024..10689 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein 10689 12842595 Q7C_14 Methylophaga frappieri hypothetical protein YP_006291886.1 10024 D 754477 CDS YP_006291887.1 387128997 12842596 complement(10686..11864) 1 NC_017856.1 PFAM: Outer membrane efflux protein; outer membrane protein 11864 12842596 Q7C_15 Methylophaga frappieri outer membrane protein YP_006291887.1 10686 R 754477 CDS YP_006291888.1 387128998 12842597 complement(11951..14746) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; RNA polymerase associated protein RapA 14746 12842597 Q7C_16 Methylophaga frappieri RNA polymerase associated protein RapA YP_006291888.1 11951 R 754477 CDS YP_006291889.1 387128999 12842598 14842..15417 1 NC_017856.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 15417 12842598 Q7C_17 Methylophaga frappieri hypothetical protein YP_006291889.1 14842 D 754477 CDS YP_006291890.1 387129000 12842599 complement(15414..16049) 1 NC_017856.1 methyltransferase-like protein 16049 12842599 Q7C_18 Methylophaga frappieri methyltransferase-like protein YP_006291890.1 15414 R 754477 CDS YP_006291891.1 387129001 12842600 complement(16049..16765) 1 NC_017856.1 hypothetical protein 16765 12842600 Q7C_19 Methylophaga frappieri hypothetical protein YP_006291891.1 16049 R 754477 CDS YP_006291892.1 387129002 12842601 complement(16771..17055) 1 NC_017856.1 hypothetical protein 17055 12842601 Q7C_20 Methylophaga frappieri hypothetical protein YP_006291892.1 16771 R 754477 CDS YP_006291893.1 387129003 12842602 complement(17076..18368) 1 NC_017856.1 PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase 18368 12842602 Q7C_21 Methylophaga frappieri aspartyl aminopeptidase YP_006291893.1 17076 R 754477 CDS YP_006291894.1 387129004 12842603 complement(18435..18884) 1 NC_017856.1 hypothetical protein 18884 12842603 Q7C_22 Methylophaga frappieri hypothetical protein YP_006291894.1 18435 R 754477 CDS YP_006291895.1 387129005 12842604 complement(18912..19343) 1 NC_017856.1 hypothetical protein 19343 12842604 Q7C_23 Methylophaga frappieri hypothetical protein YP_006291895.1 18912 R 754477 CDS YP_006291896.1 387129006 12842605 complement(19333..19806) 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 19806 12842605 Q7C_24 Methylophaga frappieri hypothetical protein YP_006291896.1 19333 R 754477 CDS YP_006291897.1 387129007 12842606 19765..19884 1 NC_017856.1 hypothetical protein 19884 12842606 Q7C_25 Methylophaga frappieri hypothetical protein YP_006291897.1 19765 D 754477 CDS YP_006291898.1 387129008 12842607 19996..22077 1 NC_017856.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 22077 12842607 Q7C_26 Methylophaga frappieri polyphosphate kinase YP_006291898.1 19996 D 754477 CDS YP_006291899.1 387129009 12842608 22077..22820 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome partitioning protein ParA 22820 12842608 Q7C_27 Methylophaga frappieri Chromosome partitioning protein ParA YP_006291899.1 22077 D 754477 CDS YP_006291900.1 387129010 12842609 complement(22817..25051) 1 NC_017856.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; 2-phospho-D-glycerate hydrolyase 25051 12842609 Q7C_28 Methylophaga frappieri 2-phospho-D-glycerate hydrolyase YP_006291900.1 22817 R 754477 CDS YP_006291901.1 387129011 12842610 25099..25392 1 NC_017856.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; RNA binding protein 25392 12842610 Q7C_29 Methylophaga frappieri RNA binding protein YP_006291901.1 25099 D 754477 CDS YP_006291902.1 387129012 12842611 25423..26022 1 NC_017856.1 PFAM: Nitroreductase family; nitroreductase 26022 12842611 Q7C_30 Methylophaga frappieri nitroreductase YP_006291902.1 25423 D 754477 CDS YP_006291903.1 387129013 12842612 26038..26499 1 NC_017856.1 PFAM: Pentapeptide repeats (8 copies); Pentapeptide repeat protein 26499 12842612 Q7C_31 Methylophaga frappieri Pentapeptide repeat protein YP_006291903.1 26038 D 754477 CDS YP_006291904.1 387129014 12842613 26628..30518 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA; ATP-dependent helicase HrpA 30518 12842613 Q7C_32 Methylophaga frappieri ATP-dependent helicase HrpA YP_006291904.1 26628 D 754477 CDS YP_006291905.1 387129015 12842614 complement(30635..30751) 1 NC_017856.1 hypothetical protein 30751 12842614 Q7C_33 Methylophaga frappieri hypothetical protein YP_006291905.1 30635 R 754477 CDS YP_006291906.1 387129016 12842615 30972..31088 1 NC_017856.1 hypothetical protein 31088 12842615 Q7C_34 Methylophaga frappieri hypothetical protein YP_006291906.1 30972 D 754477 CDS YP_006291907.1 387129017 12842616 31202..31462 1 NC_017856.1 hypothetical protein 31462 12842616 Q7C_35 Methylophaga frappieri hypothetical protein YP_006291907.1 31202 D 754477 CDS YP_006291908.1 387129018 12842617 31469..32146 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Two-component system regulatory protein 32146 12842617 Q7C_36 Methylophaga frappieri Two-component system regulatory protein YP_006291908.1 31469 D 754477 CDS YP_006291909.1 387129019 12842618 32520..33491 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 33491 12842618 Q7C_37 Methylophaga frappieri Sensor protein PhoQ YP_006291909.1 32520 D 754477 CDS YP_006291910.1 387129020 12842619 complement(33495..34007) 1 NC_017856.1 PFAM: Protein of unknown function (DUF615); hypothetical protein 34007 12842619 Q7C_38 Methylophaga frappieri hypothetical protein YP_006291910.1 33495 R 754477 CDS YP_006291911.1 387129021 12842620 complement(34007..34426) 1 NC_017856.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 34426 12842620 Q7C_39 Methylophaga frappieri secondary thiamine-phosphate synthase enzyme YP_006291911.1 34007 R 754477 CDS YP_006291912.1 387129022 12842621 complement(34426..35466) 1 NC_017856.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; anthranilate phosphoribosyltransferase 35466 12842621 Q7C_40 Methylophaga frappieri anthranilate phosphoribosyltransferase YP_006291912.1 34426 R 754477 CDS YP_006291913.1 387129023 12842622 complement(35463..37478) 1 NC_017856.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase 37478 12842622 Q7C_41 Methylophaga frappieri DNA ligase YP_006291913.1 35463 R 754477 CDS YP_006291914.1 387129024 12842623 complement(37465..38229) 1 NC_017856.1 PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; cell division protein ZipA 38229 12842623 Q7C_42 Methylophaga frappieri cell division protein ZipA YP_006291914.1 37465 R 754477 CDS YP_006291915.1 387129025 12842624 38292..38681 1 NC_017856.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; NADPH dependent preQ0 reductase 38681 12842624 Q7C_43 Methylophaga frappieri NADPH dependent preQ0 reductase YP_006291915.1 38292 D 754477 CDS YP_006291916.1 387129026 12842625 38685..39980 1 NC_017856.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY( ) 39980 12842625 Q7C_44 Methylophaga frappieri Carbohydrate kinase, FGGY( ) YP_006291916.1 38685 D 754477 CDS YP_006291917.1 387129027 12842626 39973..40725 1 NC_017856.1 PFAM: Etoposide-induced protein 2.4 (EI24); Sulfate transporter, CysZ-type 40725 12842626 Q7C_45 Methylophaga frappieri Sulfate transporter, CysZ-type YP_006291917.1 39973 D 754477 CDS YP_006291918.1 387129028 12842627 complement(40709..40921) 1 NC_017856.1 PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 40921 12842627 Q7C_46 Methylophaga frappieri NAD(P)H-nitrite reductase YP_006291918.1 40709 R 754477 CDS YP_006291919.1 387129029 12842628 complement(40942..42333) 1 NC_017856.1 hypothetical protein 42333 12842628 Q7C_47 Methylophaga frappieri hypothetical protein YP_006291919.1 40942 R 754477 CDS YP_006291920.1 387129030 12842629 complement(42444..43577) 1 NC_017856.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 43577 12842629 Q7C_48 Methylophaga frappieri Aspartate aminotransferase YP_006291920.1 42444 R 754477 CDS YP_006291921.1 387129031 12842630 complement(43612..44376) 1 NC_017856.1 hypothetical protein 44376 12842630 Q7C_49 Methylophaga frappieri hypothetical protein YP_006291921.1 43612 R 754477 CDS YP_006291922.1 387129032 12842631 44552..44911 1 NC_017856.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein, DksA/TraR family 44911 12842631 Q7C_50 Methylophaga frappieri C4-type zinc finger protein, DksA/TraR family YP_006291922.1 44552 D 754477 CDS YP_006291923.1 387129033 12842632 complement(44967..49019) 1 NC_017856.1 PFAM: Family of unknown function (DUF490); hypothetical protein 49019 12842632 Q7C_51 Methylophaga frappieri hypothetical protein YP_006291923.1 44967 R 754477 CDS YP_006291924.1 387129034 12842633 complement(49016..50746) 1 NC_017856.1 PFAM: Surface antigen; outer membrane protein 50746 12842633 Q7C_52 Methylophaga frappieri outer membrane protein YP_006291924.1 49016 R 754477 CDS YP_006291925.1 387129035 12842634 complement(50845..51777) 1 NC_017856.1 PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 51777 12842634 Q7C_53 Methylophaga frappieri AraC family transcriptional regulator YP_006291925.1 50845 R 754477 CDS YP_006291926.1 387129036 12842635 51939..53459 1 NC_017856.1 PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 53459 12842635 Q7C_54 Methylophaga frappieri Aldehyde dehydrogenase YP_006291926.1 51939 D 754477 CDS YP_006291927.1 387129037 12842636 53566..55530 1 NC_017856.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-CoA synthetase 55530 12842636 Q7C_55 Methylophaga frappieri acetyl-CoA synthetase YP_006291927.1 53566 D 754477 CDS YP_006291928.1 387129038 12842637 55555..55944 1 NC_017856.1 PFAM: S4 domain; Ribosome-associated heat shock protein 55944 12842637 Q7C_56 Methylophaga frappieri Ribosome-associated heat shock protein YP_006291928.1 55555 D 754477 CDS YP_006291929.1 387129039 12842638 55944..56357 1 NC_017856.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; Nucleoside triphosphate pyrophosphohydrolase MazG 56357 12842638 Q7C_57 Methylophaga frappieri Nucleoside triphosphate pyrophosphohydrolase MazG YP_006291929.1 55944 D 754477 CDS YP_006291930.1 387129040 12842639 complement(56349..58463) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 58463 12842639 Q7C_58 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006291930.1 56349 R 754477 CDS YP_006291931.1 387129041 12842640 complement(58529..59422) 1 NC_017856.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; Molybdenum cofactor biosynthesis protein MoaA 59422 12842640 Q7C_59 Methylophaga frappieri Molybdenum cofactor biosynthesis protein MoaA YP_006291931.1 58529 R 754477 CDS YP_006291932.1 387129042 12842641 complement(59732..60403) 1 NC_017856.1 PFAM: Uncharacterised protein family UPF0005; TEGT family carrier/transport protein 60403 12842641 Q7C_60 Methylophaga frappieri TEGT family carrier/transport protein YP_006291932.1 59732 R 754477 CDS YP_006291933.1 387129043 12842643 complement(60710..62365) 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; multi-sensor hybrid histidine kinase 62365 12842643 Q7C_62 Methylophaga frappieri multi-sensor hybrid histidine kinase YP_006291933.1 60710 R 754477 CDS YP_006291934.1 387129044 12842644 complement(62483..63232) 1 NC_017856.1 hypothetical protein 63232 12842644 Q7C_63 Methylophaga frappieri hypothetical protein YP_006291934.1 62483 R 754477 CDS YP_006291935.1 387129045 12842645 complement(63274..64935) 1 NC_017856.1 PFAM: POTRA domain, ShlB-type; hemolysin activation/secretion protein 64935 12842645 Q7C_64 Methylophaga frappieri hemolysin activation/secretion protein YP_006291935.1 63274 R 754477 CDS YP_006291936.1 387129046 12842646 complement(65059..67311) 1 NC_017856.1 LPXTG-motif cell wall anchor domain-containing protein 67311 12842646 Q7C_65 Methylophaga frappieri LPXTG-motif cell wall anchor domain-containing protein YP_006291936.1 65059 R 754477 CDS YP_006291937.1 387129047 12842647 67763..68155 1 NC_017856.1 PFAM: Response regulator receiver domain; response regulator receiver protein 68155 12842647 Q7C_66 Methylophaga frappieri response regulator receiver protein YP_006291937.1 67763 D 754477 CDS YP_006291938.1 387129048 12842648 68230..68841 1 NC_017856.1 PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family; Excisionase/Xis, DNA-binding protein 68841 12842648 Q7C_67 Methylophaga frappieri Excisionase/Xis, DNA-binding protein YP_006291938.1 68230 D 754477 CDS YP_006291939.1 387129049 12842649 68907..70043 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component hybrid sensor and regulator 70043 12842649 Q7C_68 Methylophaga frappieri two-component hybrid sensor and regulator YP_006291939.1 68907 D 754477 CDS YP_006291940.1 387129050 12842650 complement(70152..70541) 1 NC_017856.1 PFAM: Nickel uptake substrate-specific transmembrane region; metal-binding protein 70541 12842650 Q7C_69 Methylophaga frappieri metal-binding protein YP_006291940.1 70152 R 754477 CDS YP_006291941.1 387129051 12842652 71545..73689 1 NC_017856.1 PFAM: Transposase; transposase, TnpA family 73689 12842652 Q7C_73 Methylophaga frappieri transposase, TnpA family YP_006291941.1 71545 D 754477 CDS YP_006291942.1 387129052 12842653 complement(73779..74315) 1 NC_017856.1 hypothetical protein 74315 12842653 Q7C_74 Methylophaga frappieri hypothetical protein YP_006291942.1 73779 R 754477 CDS YP_006291943.1 387129053 12842654 complement(74327..74722) 1 NC_017856.1 nucleic-acid-binding protein, contains PIN domain 74722 12842654 Q7C_75 Methylophaga frappieri nucleic-acid-binding protein, contains PIN domain YP_006291943.1 74327 R 754477 CDS YP_006291944.1 387129054 12842655 complement(74719..74970) 1 NC_017856.1 regulator of stationary/sporulation gene expression 74970 12842655 Q7C_76 Methylophaga frappieri regulator of stationary/sporulation gene expression YP_006291944.1 74719 R 754477 CDS YP_006291945.1 387129055 12842656 75138..75893 1 NC_017856.1 transposase 75893 12842656 Q7C_77 Methylophaga frappieri transposase YP_006291945.1 75138 D 754477 CDS YP_006291946.1 387129056 12842657 75919..78120 1 NC_017856.1 PFAM: Transposase; transposase, TnpA family 78120 12842657 Q7C_78 Methylophaga frappieri transposase, TnpA family YP_006291946.1 75919 D 754477 CDS YP_006291947.1 387129057 12842658 complement(78199..79293) 1 NC_017856.1 PFAM: Domain of unknown function DUF87; Bipolar DNA helicase 79293 12842658 Q7C_79 Methylophaga frappieri Bipolar DNA helicase YP_006291947.1 78199 R 754477 CDS YP_006291948.1 387129058 12842659 complement(79303..80316) 1 NC_017856.1 hypothetical protein 80316 12842659 Q7C_80 Methylophaga frappieri hypothetical protein YP_006291948.1 79303 R 754477 CDS YP_006291949.1 387129059 12842660 complement(80700..81758) 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; Nucleoside-diphosphate-sugar epimerase 81758 12842660 Q7C_81 Methylophaga frappieri Nucleoside-diphosphate-sugar epimerase YP_006291949.1 80700 R 754477 CDS YP_006291950.1 387129060 12842661 complement(81842..82561) 1 NC_017856.1 PFAM: Cyclic nucleotide-binding domain; cAMP-binding protein 82561 12842661 Q7C_82 Methylophaga frappieri cAMP-binding protein YP_006291950.1 81842 R 754477 CDS YP_006291951.1 387129061 12842662 complement(82818..83426) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1989); aminomethyltransferase 83426 12842662 Q7C_83 Methylophaga frappieri aminomethyltransferase YP_006291951.1 82818 R 754477 CDS YP_006291952.1 387129062 12842663 complement(83423..84139) 1 NC_017856.1 PFAM: YqcI/YcgG family; hypothetical protein 84139 12842663 Q7C_84 Methylophaga frappieri hypothetical protein YP_006291952.1 83423 R 754477 CDS YP_006291953.1 387129063 12842664 complement(84456..84569) 1 NC_017856.1 hypothetical protein 84569 12842664 Q7C_85 Methylophaga frappieri hypothetical protein YP_006291953.1 84456 R 754477 CDS YP_006291954.1 387129064 12842665 84630..84785 1 NC_017856.1 PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); Hexameric tyrosine-coordinated heme protein (HTHP) 84785 12842665 Q7C_86 Methylophaga frappieri Hexameric tyrosine-coordinated heme protein (HTHP) YP_006291954.1 84630 D 754477 CDS YP_006291955.1 387129065 12842666 complement(84819..86021) 1 NC_017856.1 PFAM: NnrS protein; NnrS protein involved in response to NO 86021 12842666 Q7C_87 Methylophaga frappieri NnrS protein involved in response to NO YP_006291955.1 84819 R 754477 CDS YP_006291956.1 387129066 12842667 complement(86058..87368) 1 NC_017856.1 PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing; Copper-containing nitrite reductase 87368 12842667 Q7C_88 Methylophaga frappieri Copper-containing nitrite reductase YP_006291956.1 86058 R 754477 CDS YP_006291957.1 387129067 12842668 87871..88113 1 NC_017856.1 hypothetical protein 88113 12842668 Q7C_89 Methylophaga frappieri hypothetical protein YP_006291957.1 87871 D 754477 CDS YP_006291958.1 387129068 12842669 complement(88161..89738) 1 NC_017856.1 PFAM: GAF domain; Sigma-54 interaction domain; Anaerobic nitric oxide reductase transcription regulator NorR 89738 12842669 Q7C_90 Methylophaga frappieri Anaerobic nitric oxide reductase transcription regulator NorR YP_006291958.1 88161 R 754477 CDS YP_006291959.1 387129069 12842670 89932..91122 1 NC_017856.1 PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase); flavohemoprotein 91122 12842670 Q7C_91 Methylophaga frappieri flavohemoprotein YP_006291959.1 89932 D 754477 CDS YP_006291960.1 387129070 12842671 91363..91548 1 NC_017856.1 hypothetical protein 91548 12842671 Q7C_92 Methylophaga frappieri hypothetical protein YP_006291960.1 91363 D 754477 CDS YP_006291961.1 387129071 12842672 complement(91552..92241) 1 NC_017856.1 hypothetical protein 92241 12842672 Q7C_93 Methylophaga frappieri hypothetical protein YP_006291961.1 91552 R 754477 CDS YP_006291962.1 387129072 12842673 complement(92234..93013) 1 NC_017856.1 PFAM: Iron permease FTR1 family; FTR1 family iron permease 93013 12842673 Q7C_94 Methylophaga frappieri FTR1 family iron permease YP_006291962.1 92234 R 754477 CDS YP_006291963.1 387129073 12842674 complement(93016..93354) 1 NC_017856.1 hypothetical protein 93354 12842674 Q7C_95 Methylophaga frappieri hypothetical protein YP_006291963.1 93016 R 754477 CDS YP_006291964.1 387129074 12842675 complement(93351..94676) 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor histidine kinase 94676 12842675 Q7C_96 Methylophaga frappieri sensor histidine kinase YP_006291964.1 93351 R 754477 CDS YP_006291965.1 387129075 12842676 complement(94673..94849) 1 NC_017856.1 PFAM: Transcriptional regulatory protein, C terminal; Two-component system response regulator QseB 94849 12842676 Q7C_97 Methylophaga frappieri Two-component system response regulator QseB YP_006291965.1 94673 R 754477 CDS YP_006291966.1 387129076 12842677 94991..97975 1 NC_017856.1 PFAM: Transposase; transposase, TnpA family 97975 12842677 Q7C_98 Methylophaga frappieri transposase, TnpA family YP_006291966.1 94991 D 754477 CDS YP_006291967.1 387129077 12842678 complement(98028..98270) 1 NC_017856.1 PFAM: Nickel uptake substrate-specific transmembrane region; metal-binding protein 98270 12842678 Q7C_99 Methylophaga frappieri metal-binding protein YP_006291967.1 98028 R 754477 CDS YP_006291968.1 387129078 12842679 complement(98271..99317) 1 NC_017856.1 PFAM: Predicted periplasmic protein (DUF2271); PepSY-associated TM helix; hypothetical protein 99317 12842679 Q7C_100 Methylophaga frappieri hypothetical protein YP_006291968.1 98271 R 754477 CDS YP_006291969.1 387129079 12842680 complement(99551..100450) 1 NC_017856.1 PFAM: Aldose 1-epimerase; aldose 1-epimerase 100450 12842680 Q7C_101 Methylophaga frappieri aldose 1-epimerase YP_006291969.1 99551 R 754477 CDS YP_006291970.1 387129080 12842681 complement(100518..101000) 1 NC_017856.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 101000 12842681 Q7C_102 Methylophaga frappieri FKBP-type peptidyl-prolyl cis-trans isomerase SlyD YP_006291970.1 100518 R 754477 CDS YP_006291971.1 387129081 12842682 complement(101010..102263) 1 NC_017856.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type; isocitrate dehydrogenase 102263 12842682 Q7C_103 Methylophaga frappieri isocitrate dehydrogenase YP_006291971.1 101010 R 754477 CDS YP_006291972.1 387129082 12842683 102325..103023 1 NC_017856.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; Ribosomal large subunit pseudouridine synthase E 103023 12842683 Q7C_104 Methylophaga frappieri Ribosomal large subunit pseudouridine synthase E YP_006291972.1 102325 D 754477 CDS YP_006291973.1 387129083 12842684 103163..103321 1 NC_017856.1 hypothetical protein 103321 12842684 Q7C_105 Methylophaga frappieri hypothetical protein YP_006291973.1 103163 D 754477 CDS YP_006291974.1 387129084 12842685 103324..104427 1 NC_017856.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 104427 12842685 Q7C_106 Methylophaga frappieri tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_006291974.1 103324 D 754477 CDS YP_006291975.1 387129085 12842686 104424..105056 1 NC_017856.1 PFAM: Protein of unknown function (DUF489); hypothetical protein 105056 12842686 Q7C_107 Methylophaga frappieri hypothetical protein YP_006291975.1 104424 D 754477 CDS YP_006291976.1 387129086 12842687 complement(105031..105756) 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein; YbbM seven transmembrane helix protein 105756 12842687 Q7C_108 Methylophaga frappieri YbbM seven transmembrane helix protein YP_006291976.1 105031 R 754477 CDS YP_006291977.1 387129087 12842688 complement(105835..108372) 1 NC_017856.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; Aconitate hydratase 2 108372 12842688 Q7C_109 Methylophaga frappieri Aconitate hydratase 2 YP_006291977.1 105835 R 754477 CDS YP_006291978.1 387129088 12842689 108499..109866 1 NC_017856.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Adenylosuccinate lyase 109866 12842689 Q7C_110 Methylophaga frappieri Adenylosuccinate lyase YP_006291978.1 108499 D 754477 CDS YP_006291979.1 387129089 12842690 109866..110363 1 NC_017856.1 hypothetical protein 110363 12842690 Q7C_111 Methylophaga frappieri hypothetical protein YP_006291979.1 109866 D 754477 CDS YP_006291980.1 387129090 12842691 110376..111122 1 NC_017856.1 hypothetical protein 111122 12842691 Q7C_112 Methylophaga frappieri hypothetical protein YP_006291980.1 110376 D 754477 CDS YP_006291981.1 387129091 12842692 111139..111741 1 NC_017856.1 PFAM: Nitroreductase family; Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase 111741 12842692 Q7C_113 Methylophaga frappieri Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase YP_006291981.1 111139 D 754477 CDS YP_006291982.1 387129092 12842693 complement(111751..112752) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 112752 12842693 Q7C_114 Methylophaga frappieri diguanylate cyclase YP_006291982.1 111751 R 754477 CDS YP_006291983.1 387129093 12842694 complement(112818..114026) 1 NC_017856.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 114026 12842694 Q7C_115 Methylophaga frappieri argininosuccinate synthase YP_006291983.1 112818 R 754477 CDS YP_006291984.1 387129094 12842695 complement(114075..114851) 1 NC_017856.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); Methyl-directed repair DNA adenine methylase 114851 12842695 Q7C_116 Methylophaga frappieri Methyl-directed repair DNA adenine methylase YP_006291984.1 114075 R 754477 CDS YP_006291985.1 387129095 12842696 complement(114931..116694) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex 116694 12842696 Q7C_117 Methylophaga frappieri Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex YP_006291985.1 114931 R 754477 CDS YP_006291986.1 387129096 12842697 complement(116691..118010) 1 NC_017856.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 118010 12842697 Q7C_118 Methylophaga frappieri Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex YP_006291986.1 116691 R 754477 CDS YP_006291987.1 387129097 12842698 complement(118013..120673) 1 NC_017856.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; Pyruvate dehydrogenase E1 component 120673 12842698 Q7C_119 Methylophaga frappieri Pyruvate dehydrogenase E1 component YP_006291987.1 118013 R 754477 CDS YP_006291988.1 387129098 12842699 complement(120819..121415) 1 NC_017856.1 PFAM: Ferric reductase like transmembrane component; hypothetical protein 121415 12842699 Q7C_120 Methylophaga frappieri hypothetical protein YP_006291988.1 120819 R 754477 CDS YP_006291989.1 387129099 12842700 complement(121426..122382) 1 NC_017856.1 PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase subunit YedY 122382 12842700 Q7C_121 Methylophaga frappieri sulfite oxidase subunit YedY YP_006291989.1 121426 R 754477 CDS YP_006291990.1 387129100 12842701 complement(122372..123004) 1 NC_017856.1 PFAM: DoxX; hypothetical protein 123004 12842701 Q7C_122 Methylophaga frappieri hypothetical protein YP_006291990.1 122372 R 754477 CDS YP_006291991.1 387129101 12842702 complement(123073..123372) 1 NC_017856.1 low-complexity protein 123372 12842702 Q7C_123 Methylophaga frappieri low-complexity protein YP_006291991.1 123073 R 754477 CDS YP_006291992.1 387129102 12842703 123578..124189 1 NC_017856.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 124189 12842703 Q7C_124 Methylophaga frappieri RNA polymerase sigma factor RpoE YP_006291992.1 123578 D 754477 CDS YP_006291993.1 387129103 12842704 124190..124432 1 NC_017856.1 hypothetical protein 124432 12842704 Q7C_125 Methylophaga frappieri hypothetical protein YP_006291993.1 124190 D 754477 CDS YP_006291994.1 387129104 12842705 complement(124433..124678) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1244); hypothetical protein 124678 12842705 Q7C_126 Methylophaga frappieri hypothetical protein YP_006291994.1 124433 R 754477 CDS YP_006291995.1 387129105 12842706 complement(124671..126686) 1 NC_017856.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Oligopeptide/dipeptide ABC transporter, ATP-binding protein 126686 12842706 Q7C_127 Methylophaga frappieri Oligopeptide/dipeptide ABC transporter, ATP-binding protein YP_006291995.1 124671 R 754477 CDS YP_006291996.1 387129106 12842707 complement(126683..128092) 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; Oligopeptide transport system permease protein 128092 12842707 Q7C_128 Methylophaga frappieri Oligopeptide transport system permease protein YP_006291996.1 126683 R 754477 CDS YP_006291997.1 387129107 12842708 complement(128104..129063) 1 NC_017856.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 129063 12842708 Q7C_129 Methylophaga frappieri 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_006291997.1 128104 R 754477 CDS YP_006291998.1 387129108 12842709 complement(129060..130148) 1 NC_017856.1 PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; Chorismate mutase I / Prephenate dehydratase 130148 12842709 Q7C_130 Methylophaga frappieri Chorismate mutase I / Prephenate dehydratase YP_006291998.1 129060 R 754477 CDS YP_006291999.1 387129109 12842710 complement(130154..131200) 1 NC_017856.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; Phosphoserine aminotransferase 131200 12842710 Q7C_131 Methylophaga frappieri Phosphoserine aminotransferase YP_006291999.1 130154 R 754477 CDS YP_006292000.1 387129110 12842711 complement(131238..133817) 1 NC_017856.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A 133817 12842711 Q7C_132 Methylophaga frappieri DNA gyrase subunit A YP_006292000.1 131238 R 754477 CDS YP_006292001.1 387129111 12842712 complement(133925..134533) 1 NC_017856.1 PFAM: Protein of unknown function (DUF330); hypothetical protein 134533 12842712 Q7C_133 Methylophaga frappieri hypothetical protein YP_006292001.1 133925 R 754477 CDS YP_006292002.1 387129112 12842713 134681..135199 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 135199 12842713 Q7C_134 Methylophaga frappieri adenine phosphoribosyltransferase YP_006292002.1 134681 D 754477 CDS YP_006292003.1 387129113 12842714 complement(135196..136686) 1 NC_017856.1 PFAM: Phosphomethylpyrimidine kinase; Thiamine monophosphate synthase/TENI; TIGRFAM: phosphomethylpyrimidine kinase; thiamine-phosphate pyrophosphorylase; Thiamin-phosphate pyrophosphorylase 136686 12842714 Q7C_135 Methylophaga frappieri Thiamin-phosphate pyrophosphorylase YP_006292003.1 135196 R 754477 CDS YP_006292004.1 387129114 12842715 complement(136679..137476) 1 NC_017856.1 PFAM: Thiazole biosynthesis protein ThiG; Thiazole biosynthesis protein ThiG 137476 12842715 Q7C_136 Methylophaga frappieri Thiazole biosynthesis protein ThiG YP_006292004.1 136679 R 754477 CDS YP_006292005.1 387129115 12842716 complement(137478..137678) 1 NC_017856.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 137678 12842716 Q7C_137 Methylophaga frappieri thiamine biosynthesis protein ThiS YP_006292005.1 137478 R 754477 CDS YP_006292006.1 387129116 12842717 complement(137662..138735) 1 NC_017856.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; glycine oxidase 138735 12842717 Q7C_138 Methylophaga frappieri glycine oxidase YP_006292006.1 137662 R 754477 CDS YP_006292007.1 387129117 12842718 complement(138761..140569) 1 NC_017856.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; Thiamin biosynthesis protein ThiC 140569 12842718 Q7C_139 Methylophaga frappieri Thiamin biosynthesis protein ThiC YP_006292007.1 138761 R 754477 CDS YP_006292008.1 387129118 12842719 140961..141515 1 NC_017856.1 PFAM: Smr domain; hypothetical protein 141515 12842719 Q7C_140 Methylophaga frappieri hypothetical protein YP_006292008.1 140961 D 754477 CDS YP_006292009.1 387129119 12842720 complement(141544..142125) 1 NC_017856.1 Lipase 142125 12842720 Q7C_141 Methylophaga frappieri Lipase YP_006292009.1 141544 R 754477 CDS YP_006292010.1 387129120 12842721 complement(142184..142945) 1 NC_017856.1 PFAM: Integral membrane protein TerC family; integral membrane protein TerC 142945 12842721 Q7C_142 Methylophaga frappieri integral membrane protein TerC YP_006292010.1 142184 R 754477 CDS YP_006292011.1 387129121 12842722 complement(143030..145192) 1 NC_017856.1 PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase (GGDEF) with GAF and HAMP domains 145192 12842722 Q7C_143 Methylophaga frappieri diguanylate cyclase (GGDEF) with GAF and HAMP domains YP_006292011.1 143030 R 754477 CDS YP_006292012.1 387129122 12842723 complement(145199..149083) 1 NC_017856.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase 149083 12842723 Q7C_144 Methylophaga frappieri Phosphoribosylformylglycinamidine synthase YP_006292012.1 145199 R 754477 CDS YP_006292013.1 387129123 12842724 149209..149613 1 NC_017856.1 PFAM: RDD family; hypothetical protein 149613 12842724 Q7C_145 Methylophaga frappieri hypothetical protein YP_006292013.1 149209 D 754477 CDS YP_006292014.1 387129124 12842725 complement(149621..149848) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2835); hypothetical protein 149848 12842725 Q7C_146 Methylophaga frappieri hypothetical protein YP_006292014.1 149621 R 754477 CDS YP_006292015.1 387129125 12842726 complement(149826..150263) 1 NC_017856.1 PFAM: HIT domain; HIT family hydrolase, diadenosine tetraphosphate hydrolase 150263 12842726 Q7C_147 Methylophaga frappieri HIT family hydrolase, diadenosine tetraphosphate hydrolase YP_006292015.1 149826 R 754477 CDS YP_006292016.1 387129126 12842727 complement(150266..152914) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type; Membrane alanine aminopeptidase N 152914 12842727 Q7C_148 Methylophaga frappieri Membrane alanine aminopeptidase N YP_006292016.1 150266 R 754477 CDS YP_006292017.1 387129127 12842810 complement(152914..153237) 1 NC_017856.1 Bsu YqfO NIF3/CutA domain-containing protein 153237 12842810 Q7C_149 Methylophaga frappieri Bsu YqfO NIF3/CutA domain-containing protein YP_006292017.1 152914 R 754477 CDS YP_006292018.1 387129128 12842811 complement(153240..154280) 1 NC_017856.1 PFAM: WD domain, G-beta repeat; WD-repeat protein 154280 12842811 Q7C_150 Methylophaga frappieri WD-repeat protein YP_006292018.1 153240 R 754477 CDS YP_006292019.1 387129129 12842812 complement(154290..154853) 1 NC_017856.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; Deoxycytidine triphosphate deaminase 154853 12842812 Q7C_151 Methylophaga frappieri Deoxycytidine triphosphate deaminase YP_006292019.1 154290 R 754477 CDS YP_006292020.1 387129130 12842813 complement(154899..155975) 1 NC_017856.1 PFAM: ParA/MinD ATPase like; Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP 155975 12842813 Q7C_152 Methylophaga frappieri Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP YP_006292020.1 154899 R 754477 CDS YP_006292021.1 387129131 12842814 complement(156097..156978) 1 NC_017856.1 PFAM: Carbon-nitrogen hydrolase; Hydrolase, carbon-nitrogen family 156978 12842814 Q7C_153 Methylophaga frappieri Hydrolase, carbon-nitrogen family YP_006292021.1 156097 R 754477 CDS YP_006292022.1 387129132 12842815 complement(157028..157615) 1 NC_017856.1 Histone acetyltransferase HPA2 157615 12842815 Q7C_154 Methylophaga frappieri Histone acetyltransferase HPA2 YP_006292022.1 157028 R 754477 CDS YP_006292023.1 387129133 12842816 complement(157689..158096) 1 NC_017856.1 TIGRFAM: hypothetical protein, steroid delta-isomerase-related; Isopropylmalate/homocitrate/citramalate synthase 158096 12842816 Q7C_155 Methylophaga frappieri Isopropylmalate/homocitrate/citramalate synthase YP_006292023.1 157689 R 754477 CDS YP_006292024.1 387129134 12842817 complement(158177..159061) 1 NC_017856.1 PFAM: Arginase family; TIGRFAM: agmatinase; Agmatinase 159061 12842817 Q7C_156 Methylophaga frappieri Agmatinase YP_006292024.1 158177 R 754477 CDS YP_006292025.1 387129135 12842818 complement(159058..160224) 1 NC_017856.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; Carboxynorspermidine decarboxylase 160224 12842818 Q7C_157 Methylophaga frappieri Carboxynorspermidine decarboxylase YP_006292025.1 159058 R 754477 CDS YP_006292026.1 387129136 12842819 complement(160263..161462) 1 NC_017856.1 PFAM: Saccharopine dehydrogenase; catalase 161462 12842819 Q7C_158 Methylophaga frappieri catalase YP_006292026.1 160263 R 754477 CDS YP_006292027.1 387129137 12842820 complement(161523..163466) 1 NC_017856.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; biosynthetic arginine decarboxylase 163466 12842820 Q7C_159 Methylophaga frappieri biosynthetic arginine decarboxylase YP_006292027.1 161523 R 754477 CDS YP_006292028.1 387129138 12842821 complement(163577..164632) 1 NC_017856.1 PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; hypothetical protein 164632 12842821 Q7C_160 Methylophaga frappieri hypothetical protein YP_006292028.1 163577 R 754477 CDS YP_006292029.1 387129139 12842822 complement(164632..165537) 1 NC_017856.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Ribosomal protein S6 glutaminyl transferase 165537 12842822 Q7C_161 Methylophaga frappieri Ribosomal protein S6 glutaminyl transferase YP_006292029.1 164632 R 754477 CDS YP_006292030.1 387129140 12842823 complement(165534..166031) 1 NC_017856.1 PFAM: Protein of unknown function (DUF785); hypothetical protein 166031 12842823 Q7C_162 Methylophaga frappieri hypothetical protein YP_006292030.1 165534 R 754477 CDS YP_006292031.1 387129141 12842824 complement(166249..166671) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; fimbrial protein 166671 12842824 Q7C_163 Methylophaga frappieri fimbrial protein YP_006292031.1 166249 R 754477 CDS YP_006292032.1 387129142 12842825 complement(166813..168522) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; Lipid A core-O-antigen ligase 168522 12842825 Q7C_164 Methylophaga frappieri Lipid A core-O-antigen ligase YP_006292032.1 166813 R 754477 CDS YP_006292033.1 387129143 12842826 complement(168577..170166) 1 NC_017856.1 PFAM: Tetratricopeptide repeat; TIGRFAM: hypothetical protein; hypothetical protein 170166 12842826 Q7C_165 Methylophaga frappieri hypothetical protein YP_006292033.1 168577 R 754477 CDS YP_006292034.1 387129144 12842827 170273..171304 1 NC_017856.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); membrane-bound metal-dependent hydrolase 171304 12842827 Q7C_166 Methylophaga frappieri membrane-bound metal-dependent hydrolase YP_006292034.1 170273 D 754477 CDS YP_006292035.1 387129145 12842828 complement(171281..172012) 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063); hypothetical protein 172012 12842828 Q7C_167 Methylophaga frappieri hypothetical protein YP_006292035.1 171281 R 754477 CDS YP_006292036.1 387129146 12842829 complement(172005..172877) 1 NC_017856.1 PFAM: Protein of unknown function (DUF692); hypothetical protein 172877 12842829 Q7C_168 Methylophaga frappieri hypothetical protein YP_006292036.1 172005 R 754477 CDS YP_006292037.1 387129147 12842830 complement(172915..173667) 1 NC_017856.1 hypothetical protein 173667 12842830 Q7C_169 Methylophaga frappieri hypothetical protein YP_006292037.1 172915 R 754477 CDS YP_006292038.1 387129148 12842831 complement(173669..174016) 1 NC_017856.1 PFAM: Rhodanese-like domain; beta-lactamase 174016 12842831 Q7C_170 Methylophaga frappieri beta-lactamase YP_006292038.1 173669 R 754477 CDS YP_006292039.1 387129149 12842832 174158..175138 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.1; Oligopeptide transport system permease OppB 175138 12842832 Q7C_171 Methylophaga frappieri Oligopeptide transport system permease OppB YP_006292039.1 174158 D 754477 CDS YP_006292040.1 387129150 12842833 175131..175940 1 NC_017856.1 PFAM: Protein of unknown function (DUF455); hypothetical protein 175940 12842833 Q7C_172 Methylophaga frappieri hypothetical protein YP_006292040.1 175131 D 754477 CDS YP_006292041.1 387129151 12842834 complement(175937..176263) 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0125); hypothetical protein 176263 12842834 Q7C_173 Methylophaga frappieri hypothetical protein YP_006292041.1 175937 R 754477 CDS YP_006292042.1 387129152 12842835 complement(176256..176690) 1 NC_017856.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; hypothetical protein 176690 12842835 Q7C_174 Methylophaga frappieri hypothetical protein YP_006292042.1 176256 R 754477 CDS YP_006292043.1 387129153 12842836 complement(176717..178084) 1 NC_017856.1 PFAM: Sodium:neurotransmitter symporter family; Sodium-dependent transporter family protein 178084 12842836 Q7C_175 Methylophaga frappieri Sodium-dependent transporter family protein YP_006292043.1 176717 R 754477 CDS YP_006292044.1 387129154 12842837 178177..178656 1 NC_017856.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; tmRNA-binding protein SmpB 178656 12842837 Q7C_176 Methylophaga frappieri tmRNA-binding protein SmpB YP_006292044.1 178177 D 754477 CDS YP_006292045.1 387129155 12842838 complement(179167..179682) 1 NC_017856.1 hypothetical protein 179682 12842838 Q7C_177 Methylophaga frappieri hypothetical protein YP_006292045.1 179167 R 754477 CDS YP_006292046.1 387129156 12842839 complement(179798..180055) 1 NC_017856.1 hypothetical protein 180055 12842839 Q7C_178 Methylophaga frappieri hypothetical protein YP_006292046.1 179798 R 754477 CDS YP_006292047.1 387129157 12842840 180221..180799 1 NC_017856.1 PFAM: SNARE associated Golgi protein; hypothetical protein 180799 12842840 Q7C_179 Methylophaga frappieri hypothetical protein YP_006292047.1 180221 D 754477 CDS YP_006292048.1 387129158 12842841 complement(180804..181328) 1 NC_017856.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; Peptide methionine sulfoxide reductase MsrA 181328 12842841 Q7C_180 Methylophaga frappieri Peptide methionine sulfoxide reductase MsrA YP_006292048.1 180804 R 754477 CDS YP_006292049.1 387129159 12842842 complement(181397..181543) 1 NC_017856.1 hypothetical protein 181543 12842842 Q7C_181 Methylophaga frappieri hypothetical protein YP_006292049.1 181397 R 754477 CDS YP_006292050.1 387129160 12842843 complement(181797..182777) 1 NC_017856.1 transcriptional regulator, AraC/XylS family 182777 12842843 Q7C_182 Methylophaga frappieri transcriptional regulator, AraC/XylS family YP_006292050.1 181797 R 754477 CDS YP_006292051.1 387129161 12842844 complement(182774..182911) 1 NC_017856.1 hypothetical protein 182911 12842844 Q7C_183 Methylophaga frappieri hypothetical protein YP_006292051.1 182774 R 754477 CDS YP_006292052.1 387129162 12842845 183050..185092 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 185092 12842845 Q7C_184 Methylophaga frappieri TonB-dependent receptor YP_006292052.1 183050 D 754477 CDS YP_006292053.1 387129163 12842846 185160..185435 1 NC_017856.1 hypothetical protein 185435 12842846 Q7C_185 Methylophaga frappieri hypothetical protein YP_006292053.1 185160 D 754477 CDS YP_006292054.1 387129164 12842847 185432..185713 1 NC_017856.1 hypothetical protein 185713 12842847 Q7C_186 Methylophaga frappieri hypothetical protein YP_006292054.1 185432 D 754477 CDS YP_006292055.1 387129165 12842848 185731..187398 1 NC_017856.1 PFAM: PepSY-associated TM helix; iron-regulated membrane protein 187398 12842848 Q7C_187 Methylophaga frappieri iron-regulated membrane protein YP_006292055.1 185731 D 754477 CDS YP_006292056.1 387129166 12842849 complement(187474..189942) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TonB-dependent receptor 189942 12842849 Q7C_188 Methylophaga frappieri TonB-dependent receptor YP_006292056.1 187474 R 754477 CDS YP_006292057.1 387129167 12842850 complement(190075..191073) 1 NC_017856.1 PFAM: FecR protein; FecR protein 191073 12842850 Q7C_189 Methylophaga frappieri FecR protein YP_006292057.1 190075 R 754477 CDS YP_006292058.1 387129168 12842851 complement(191063..191407) 1 NC_017856.1 PFAM: Sigma-70, region 4; sigma-70 factor, ECF subfamily 191407 12842851 Q7C_190 Methylophaga frappieri sigma-70 factor, ECF subfamily YP_006292058.1 191063 R 754477 CDS YP_006292059.1 387129169 12842852 191985..193604 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase 193604 12842852 Q7C_191 Methylophaga frappieri AAA ATPase YP_006292059.1 191985 D 754477 CDS YP_006292060.1 387129170 12842853 193808..194617 1 NC_017856.1 hypothetical protein 194617 12842853 Q7C_192 Methylophaga frappieri hypothetical protein YP_006292060.1 193808 D 754477 CDS YP_006292061.1 387129171 12842854 194807..196108 1 NC_017856.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 196108 12842854 Q7C_193 Methylophaga frappieri Potassium efflux system KefA protein / Small-conductance mechanosensitive channel YP_006292061.1 194807 D 754477 CDS YP_006292062.1 387129172 12842855 196199..196654 1 NC_017856.1 PFAM: MarR family; Organic hydroperoxide resistance transcriptional regulator 196654 12842855 Q7C_194 Methylophaga frappieri Organic hydroperoxide resistance transcriptional regulator YP_006292062.1 196199 D 754477 CDS YP_006292063.1 387129173 12842856 complement(196656..197453) 1 NC_017856.1 hypothetical protein 197453 12842856 Q7C_195 Methylophaga frappieri hypothetical protein YP_006292063.1 196656 R 754477 CDS YP_006292064.1 387129174 12842857 complement(197476..197790) 1 NC_017856.1 hypothetical protein 197790 12842857 Q7C_196 Methylophaga frappieri hypothetical protein YP_006292064.1 197476 R 754477 CDS YP_006292065.1 387129175 12842858 197944..198759 1 NC_017856.1 PFAM: Ion transport protein; Kef-type K+ transport system NAD-binding protein 198759 12842858 Q7C_197 Methylophaga frappieri Kef-type K+ transport system NAD-binding protein YP_006292065.1 197944 D 754477 CDS YP_006292066.1 387129176 12842859 198824..199345 1 NC_017856.1 PFAM: Lipocalin-like domain; Outer membrane lipoprotein 199345 12842859 Q7C_198 Methylophaga frappieri Outer membrane lipoprotein YP_006292066.1 198824 D 754477 CDS YP_006292067.1 387129177 12842860 199474..199923 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 199923 12842860 Q7C_199 Methylophaga frappieri acetyltransferase YP_006292067.1 199474 D 754477 CDS YP_006292068.1 387129178 12842861 complement(200191..200313) 1 NC_017856.1 hypothetical protein 200313 12842861 Q7C_200 Methylophaga frappieri hypothetical protein YP_006292068.1 200191 R 754477 CDS YP_006292069.1 387129179 12842862 200366..200674 1 NC_017856.1 hypothetical protein 200674 12842862 Q7C_201 Methylophaga frappieri hypothetical protein YP_006292069.1 200366 D 754477 CDS YP_006292070.1 387129180 12842917 complement(200676..201641) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; tRNA (5-methoxyuridine) 34 synthase 201641 12842917 Q7C_202 Methylophaga frappieri tRNA (5-methoxyuridine) 34 synthase YP_006292070.1 200676 R 754477 CDS YP_006292071.1 387129181 12842918 complement(201642..202373) 1 NC_017856.1 TIGRFAM: methyltransferase, putative; tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase 202373 12842918 Q7C_203 Methylophaga frappieri tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase YP_006292071.1 201642 R 754477 CDS YP_006292072.1 387129182 12842919 complement(202370..203056) 1 NC_017856.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; Inactive metal-dependent proteases-like protein 203056 12842919 Q7C_204 Methylophaga frappieri Inactive metal-dependent proteases-like protein YP_006292072.1 202370 R 754477 CDS YP_006292073.1 387129183 12842920 203133..203255 1 NC_017856.1 hypothetical protein 203255 12842920 Q7C_205 Methylophaga frappieri hypothetical protein YP_006292073.1 203133 D 754477 CDS YP_006292074.1 387129184 12842921 complement(203268..205454) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; Fe-S oxidoreductase 205454 12842921 Q7C_206 Methylophaga frappieri Fe-S oxidoreductase YP_006292074.1 203268 R 754477 CDS YP_006292075.1 387129185 12842922 complement(205525..206112) 1 NC_017856.1 PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG protein 206112 12842922 Q7C_207 Methylophaga frappieri ErfK/YbiS/YcfS/YnhG protein YP_006292075.1 205525 R 754477 CDS YP_006292076.1 387129186 12842923 complement(206191..206994) 1 NC_017856.1 PFAM: Spermine/spermidine synthase; spermidine synthase 206994 12842923 Q7C_208 Methylophaga frappieri spermidine synthase YP_006292076.1 206191 R 754477 CDS YP_006292077.1 387129187 12842924 complement(206998..207870) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3530); hypothetical protein 207870 12842924 Q7C_209 Methylophaga frappieri hypothetical protein YP_006292077.1 206998 R 754477 CDS YP_006292078.1 387129188 12842925 208030..208722 1 NC_017856.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 208722 12842925 Q7C_210 Methylophaga frappieri Ribulose-phosphate 3-epimerase YP_006292078.1 208030 D 754477 CDS YP_006292079.1 387129189 12842926 208782..210278 1 NC_017856.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; Anthranilate synthase, aminase component 210278 12842926 Q7C_211 Methylophaga frappieri Anthranilate synthase, aminase component YP_006292079.1 208782 D 754477 CDS YP_006292080.1 387129190 12842927 210288..210869 1 NC_017856.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase 210869 12842927 Q7C_212 Methylophaga frappieri anthranilate synthase YP_006292080.1 210288 D 754477 CDS YP_006292081.1 387129191 12842928 210869..211909 1 NC_017856.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 211909 12842928 Q7C_213 Methylophaga frappieri anthranilate phosphoribosyltransferase YP_006292081.1 210869 D 754477 CDS YP_006292082.1 387129192 12842929 211902..212702 1 NC_017856.1 PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 212702 12842929 Q7C_214 Methylophaga frappieri Indole-3-glycerol phosphate synthase YP_006292082.1 211902 D 754477 CDS YP_006292083.1 387129193 12842930 complement(212699..213421) 1 NC_017856.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Cyclic AMP receptor protein 213421 12842930 Q7C_215 Methylophaga frappieri Cyclic AMP receptor protein YP_006292083.1 212699 R 754477 CDS YP_006292084.1 387129194 12842931 213502..213921 1 NC_017856.1 PFAM: OsmC-like protein; OsmC/Ohr family protein 213921 12842931 Q7C_216 Methylophaga frappieri OsmC/Ohr family protein YP_006292084.1 213502 D 754477 CDS YP_006292085.1 387129195 12842932 213978..214214 1 NC_017856.1 PFAM: YcgL domain; hypothetical protein 214214 12842932 Q7C_217 Methylophaga frappieri hypothetical protein YP_006292085.1 213978 D 754477 CDS YP_006292086.1 387129196 12842933 complement(214209..216746) 1 NC_017856.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 216746 12842933 Q7C_218 Methylophaga frappieri DNA mismatch repair protein MutS YP_006292086.1 214209 R 754477 CDS YP_006292087.1 387129197 12842934 216764..217258 1 NC_017856.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Protein Implicated in DNA repair function with RecA and MutS; C-terminal domain of CinA type S 217258 12842934 Q7C_219 Methylophaga frappieri C-terminal domain of CinA type S YP_006292087.1 216764 D 754477 CDS YP_006292088.1 387129198 12842935 217317..218360 1 NC_017856.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A 218360 12842935 Q7C_220 Methylophaga frappieri recombinase A YP_006292088.1 217317 D 754477 CDS YP_006292089.1 387129199 12842936 218435..218797 1 NC_017856.1 PFAM: RecX family; Regulatory protein RecX 218797 12842936 Q7C_221 Methylophaga frappieri Regulatory protein RecX YP_006292089.1 218435 D 754477 CDS YP_006292090.1 387129200 12842937 218794..221397 1 NC_017856.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 221397 12842937 Q7C_222 Methylophaga frappieri alanyl-tRNA synthetase YP_006292090.1 218794 D 754477 CDS YP_006292091.1 387129201 12842938 221400..222620 1 NC_017856.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Aspartokinase 222620 12842938 Q7C_223 Methylophaga frappieri Aspartokinase YP_006292091.1 221400 D 754477 CDS YP_006292092.1 387129202 12842939 222823..223008 1 NC_017856.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator 223008 12842939 Q7C_224 Methylophaga frappieri Carbon storage regulator YP_006292092.1 222823 D 754477 CDS YP_006292093.1 387129203 12842942 complement(223392..223991) 1 NC_017856.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS-response repressor and protease LexA 223991 12842942 Q7C_227 Methylophaga frappieri SOS-response repressor and protease LexA YP_006292093.1 223392 R 754477 CDS YP_006292094.1 387129204 12842943 complement(224248..224790) 1 NC_017856.1 PFAM: Glutathione peroxidase; glutathione peroxidase 224790 12842943 Q7C_228 Methylophaga frappieri glutathione peroxidase YP_006292094.1 224248 R 754477 CDS YP_006292095.1 387129205 12842944 225029..225241 1 NC_017856.1 hypothetical protein 225241 12842944 Q7C_229 Methylophaga frappieri hypothetical protein YP_006292095.1 225029 D 754477 CDS YP_006292096.1 387129206 12842945 complement(225238..226548) 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: hypothetical protein; Metallo-beta-lactamase family protein, RNA-specific 226548 12842945 Q7C_230 Methylophaga frappieri Metallo-beta-lactamase family protein, RNA-specific YP_006292096.1 225238 R 754477 CDS YP_006292097.1 387129207 12842946 226830..227111 1 NC_017856.1 PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; oxaloacetate decarboxylase subunit gamma 227111 12842946 Q7C_231 Methylophaga frappieri oxaloacetate decarboxylase subunit gamma YP_006292097.1 226830 D 754477 CDS YP_006292098.1 387129208 12842947 227148..228929 1 NC_017856.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; oxaloacetate decarboxylase subunit alpha 228929 12842947 Q7C_232 Methylophaga frappieri oxaloacetate decarboxylase subunit alpha YP_006292098.1 227148 D 754477 CDS YP_006292099.1 387129209 12842948 228939..230075 1 NC_017856.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; oxaloacetate decarboxylase subunit beta 230075 12842948 Q7C_233 Methylophaga frappieri oxaloacetate decarboxylase subunit beta YP_006292099.1 228939 D 754477 CDS YP_006292100.1 387129210 12842949 complement(230082..230390) 1 NC_017856.1 hypothetical protein 230390 12842949 Q7C_234 Methylophaga frappieri hypothetical protein YP_006292100.1 230082 R 754477 CDS YP_006292101.1 387129211 12842950 230479..230703 1 NC_017856.1 PFAM: S4 domain; hypothetical protein 230703 12842950 Q7C_235 Methylophaga frappieri hypothetical protein YP_006292101.1 230479 D 754477 CDS YP_006292102.1 387129212 12842951 complement(230715..231305) 1 NC_017856.1 PFAM: 2OG-Fe(II) oxygenase superfamily; TIGRFAM: DNA alkylation damage repair protein AlkB; Alkylated DNA repair protein AlkB 231305 12842951 Q7C_236 Methylophaga frappieri Alkylated DNA repair protein AlkB YP_006292102.1 230715 R 754477 CDS YP_006292103.1 387129213 12842952 complement(231364..231876) 1 NC_017856.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase 231876 12842952 Q7C_237 Methylophaga frappieri ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase YP_006292103.1 231364 R 754477 CDS YP_006292104.1 387129214 12842953 231993..232406 1 NC_017856.1 hypothetical protein 232406 12842953 Q7C_238 Methylophaga frappieri hypothetical protein YP_006292104.1 231993 D 754477 CDS YP_006292105.1 387129215 12842954 233012..233863 1 NC_017856.1 PFAM: Pirin C-terminal cupin domain; Pirin; Pirin 233863 12842954 Q7C_239 Methylophaga frappieri Pirin YP_006292105.1 233012 D 754477 CDS YP_006292106.1 387129216 12842955 complement(234161..234736) 1 NC_017856.1 PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase 234736 12842955 Q7C_240 Methylophaga frappieri FMN-dependent NADH-azoreductase YP_006292106.1 234161 R 754477 CDS YP_006292107.1 387129217 12842956 234839..235747 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 235747 12842956 Q7C_241 Methylophaga frappieri LysR family transcriptional regulator YP_006292107.1 234839 D 754477 CDS YP_006292108.1 387129218 12842957 235807..236463 1 NC_017856.1 PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein 236463 12842957 Q7C_242 Methylophaga frappieri pyridoxamine 5'-phosphate oxidase-like protein YP_006292108.1 235807 D 754477 CDS YP_006292109.1 387129219 12842958 complement(236570..237634) 1 NC_017856.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; Inner membrane protein YrbG 237634 12842958 Q7C_243 Methylophaga frappieri Inner membrane protein YrbG YP_006292109.1 236570 R 754477 CDS YP_006292110.1 387129220 12842959 complement(237675..239630) 1 NC_017856.1 PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 239630 12842959 Q7C_244 Methylophaga frappieri sucrose phosphorylase YP_006292110.1 237675 R 754477 CDS YP_006292111.1 387129221 12842960 complement(239633..240466) 1 NC_017856.1 PFAM: pfkB family carbohydrate kinase; fructokinase 240466 12842960 Q7C_245 Methylophaga frappieri fructokinase YP_006292111.1 239633 R 754477 CDS YP_006292112.1 387129222 12842961 complement(240516..241373) 1 NC_017856.1 PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; HAD-superfamily hydrolase, subfamily IIB; alpha,alpha-trehalose-phosphate synthase 241373 12842961 Q7C_246 Methylophaga frappieri alpha,alpha-trehalose-phosphate synthase YP_006292112.1 240516 R 754477 CDS YP_006292113.1 387129223 12842962 complement(241380..243515) 1 NC_017856.1 PFAM: Sucrose synthase; Glycosyl transferases group 1; Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; sucrose-phosphate synthase, putative, glycosyltransferase domain; sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase 243515 12842962 Q7C_247 Methylophaga frappieri Sucrose phosphate synthase YP_006292113.1 241380 R 754477 CDS YP_006292114.1 387129224 12842963 243683..244513 1 NC_017856.1 methyltransferase 244513 12842963 Q7C_248 Methylophaga frappieri methyltransferase YP_006292114.1 243683 D 754477 CDS YP_006292115.1 387129225 12842964 complement(244510..245235) 1 NC_017856.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; Succinate dehydrogenase iron-sulfur protein 245235 12842964 Q7C_249 Methylophaga frappieri Succinate dehydrogenase iron-sulfur protein YP_006292115.1 244510 R 754477 CDS YP_006292116.1 387129226 12842965 complement(245232..247172) 1 NC_017856.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; Succinate dehydrogenase flavoprotein subunit 247172 12842965 Q7C_250 Methylophaga frappieri Succinate dehydrogenase flavoprotein subunit YP_006292116.1 245232 R 754477 CDS YP_006292117.1 387129227 12842966 complement(247169..247759) 1 NC_017856.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; Succinate dehydrogenase cytochrome b subunit 247759 12842966 Q7C_251 Methylophaga frappieri Succinate dehydrogenase cytochrome b subunit YP_006292117.1 247169 R 754477 CDS YP_006292118.1 387129228 12842967 complement(247759..248262) 1 NC_017856.1 hypothetical protein 248262 12842967 Q7C_252 Methylophaga frappieri hypothetical protein YP_006292118.1 247759 R 754477 CDS YP_006292119.1 387129229 12842968 248426..250453 1 NC_017856.1 PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 250453 12842968 Q7C_253 Methylophaga frappieri methionyl-tRNA synthetase YP_006292119.1 248426 D 754477 CDS YP_006292120.1 387129230 12842969 complement(250497..251051) 1 NC_017856.1 PFAM: Peptidase propeptide and YPEB domain; propeptide, pepSY amd peptidase M4 251051 12842969 Q7C_254 Methylophaga frappieri propeptide, pepSY amd peptidase M4 YP_006292120.1 250497 R 754477 CDS YP_006292121.1 387129231 12842970 complement(251200..251625) 1 NC_017856.1 PFAM: Hsp20/alpha crystallin family; Low molecular weight heat shock protein 251625 12842970 Q7C_255 Methylophaga frappieri Low molecular weight heat shock protein YP_006292121.1 251200 R 754477 CDS YP_006292122.1 387129232 12842971 complement(251755..252411) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA binding response regulator, LuxR family 252411 12842971 Q7C_256 Methylophaga frappieri DNA binding response regulator, LuxR family YP_006292122.1 251755 R 754477 CDS YP_006292123.1 387129233 12842972 complement(252401..253744) 1 NC_017856.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; sensory box histidine kinase 253744 12842972 Q7C_257 Methylophaga frappieri sensory box histidine kinase YP_006292123.1 252401 R 754477 CDS YP_006292124.1 387129234 12842973 complement(253767..254810) 1 NC_017856.1 hypothetical protein 254810 12842973 Q7C_258 Methylophaga frappieri hypothetical protein YP_006292124.1 253767 R 754477 CDS YP_006292125.1 387129235 12842974 complement(254887..257220) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein; General secretion pathway protein D 257220 12842974 Q7C_259 Methylophaga frappieri General secretion pathway protein D YP_006292125.1 254887 R 754477 CDS YP_006292126.1 387129236 12842975 complement(257217..257594) 1 NC_017856.1 hypothetical protein 257594 12842975 Q7C_260 Methylophaga frappieri hypothetical protein YP_006292126.1 257217 R 754477 CDS YP_006292127.1 387129237 12842976 complement(257661..258884) 1 NC_017856.1 PFAM: Bacterial type II secretion system protein F domain; General secretion pathway protein F 258884 12842976 Q7C_261 Methylophaga frappieri General secretion pathway protein F YP_006292127.1 257661 R 754477 CDS YP_006292128.1 387129238 12842977 complement(258886..260535) 1 NC_017856.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; type IV fimbrial assembly, ATPase PilB 260535 12842977 Q7C_262 Methylophaga frappieri type IV fimbrial assembly, ATPase PilB YP_006292128.1 258886 R 754477 CDS YP_006292129.1 387129239 12842978 complement(260553..261215) 1 NC_017856.1 hypothetical protein 261215 12842978 Q7C_263 Methylophaga frappieri hypothetical protein YP_006292129.1 260553 R 754477 CDS YP_006292130.1 387129240 12842979 complement(261212..262885) 1 NC_017856.1 hypothetical protein 262885 12842979 Q7C_264 Methylophaga frappieri hypothetical protein YP_006292130.1 261212 R 754477 CDS YP_006292131.1 387129241 12842980 complement(262978..263133) 1 NC_017856.1 hypothetical protein 263133 12842980 Q7C_265 Methylophaga frappieri hypothetical protein YP_006292131.1 262978 R 754477 CDS YP_006292132.1 387129242 12842981 complement(263169..264758) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 264758 12842981 Q7C_266 Methylophaga frappieri hypothetical protein YP_006292132.1 263169 R 754477 CDS YP_006292133.1 387129243 12842982 complement(264766..265596) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 265596 12842982 Q7C_267 Methylophaga frappieri hypothetical protein YP_006292133.1 264766 R 754477 CDS YP_006292134.1 387129244 12842983 complement(265777..266790) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 266790 12842983 Q7C_268 Methylophaga frappieri hypothetical protein YP_006292134.1 265777 R 754477 CDS YP_006292135.1 387129245 12842984 complement(266787..266972) 1 NC_017856.1 hypothetical protein 266972 12842984 Q7C_269 Methylophaga frappieri hypothetical protein YP_006292135.1 266787 R 754477 CDS YP_006292136.1 387129246 12842985 complement(266953..267147) 1 NC_017856.1 hypothetical protein 267147 12842985 Q7C_270 Methylophaga frappieri hypothetical protein YP_006292136.1 266953 R 754477 CDS YP_006292137.1 387129247 12842986 complement(267489..269267) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; Lipid A core--O-antigen ligase 269267 12842986 Q7C_271 Methylophaga frappieri Lipid A core--O-antigen ligase YP_006292137.1 267489 R 754477 CDS YP_006292138.1 387129248 12842987 complement(269660..269995) 1 NC_017856.1 PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; PadD-like protein 269995 12842987 Q7C_272 Methylophaga frappieri PadD-like protein YP_006292138.1 269660 R 754477 CDS YP_006292139.1 387129249 12842988 complement(270007..270453) 1 NC_017856.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 270453 12842988 Q7C_273 Methylophaga frappieri iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 YP_006292139.1 270007 R 754477 CDS YP_006292140.1 387129250 12842989 complement(270453..271676) 1 NC_017856.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; Cysteine desulfurase , SufS subfamily 271676 12842989 Q7C_274 Methylophaga frappieri Cysteine desulfurase , SufS subfamily YP_006292140.1 270453 R 754477 CDS YP_006292141.1 387129251 12842990 complement(271682..272974) 1 NC_017856.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; Iron-sulfur cluster assembly protein SufD 272974 12842990 Q7C_275 Methylophaga frappieri Iron-sulfur cluster assembly protein SufD YP_006292141.1 271682 R 754477 CDS YP_006292142.1 387129252 12842991 complement(272971..273738) 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-sulfur cluster assembly ATPase protein SufC 273738 12842991 Q7C_276 Methylophaga frappieri Iron-sulfur cluster assembly ATPase protein SufC YP_006292142.1 272971 R 754477 CDS YP_006292143.1 387129253 12842992 complement(273779..275233) 1 NC_017856.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-sulfur cluster assembly protein SufB 275233 12842992 Q7C_277 Methylophaga frappieri Iron-sulfur cluster assembly protein SufB YP_006292143.1 273779 R 754477 CDS YP_006292144.1 387129254 12842993 complement(275226..275714) 1 NC_017856.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial; Iron-sulfur cluster regulator IscR 275714 12842993 Q7C_278 Methylophaga frappieri Iron-sulfur cluster regulator IscR YP_006292144.1 275226 R 754477 CDS YP_006292145.1 387129255 12842994 275967..276587 1 NC_017856.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase fklB 276587 12842994 Q7C_279 Methylophaga frappieri FKBP-type peptidyl-prolyl cis-trans isomerase fklB YP_006292145.1 275967 D 754477 CDS YP_006292146.1 387129256 12842995 complement(276640..277188) 1 NC_017856.1 PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase AmpD 277188 12842995 Q7C_280 Methylophaga frappieri N-acetylmuramoyl-L-alanine amidase AmpD YP_006292146.1 276640 R 754477 CDS YP_006292147.1 387129257 12842996 277265..278107 1 NC_017856.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase 278107 12842996 Q7C_281 Methylophaga frappieri quinolinate phosphoribosyltransferase YP_006292147.1 277265 D 754477 CDS YP_006292148.1 387129258 12842997 complement(278142..280448) 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor 280448 12842997 Q7C_282 Methylophaga frappieri TonB-dependent receptor YP_006292148.1 278142 R 754477 CDS YP_006292149.1 387129259 12842998 complement(280603..282000) 1 NC_017856.1 PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; hypothetical protein 282000 12842998 Q7C_283 Methylophaga frappieri hypothetical protein YP_006292149.1 280603 R 754477 CDS YP_006292150.1 387129260 12842999 complement(282011..282790) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1223); hypothetical protein 282790 12842999 Q7C_284 Methylophaga frappieri hypothetical protein YP_006292150.1 282011 R 754477 CDS YP_006292151.1 387129261 12844614 complement(282829..283881) 1 NC_017856.1 PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine 13 synthase 283881 12844614 Q7C_285 Methylophaga frappieri tRNA pseudouridine 13 synthase YP_006292151.1 282829 R 754477 CDS YP_006292152.1 387129262 12844615 complement(283884..284366) 1 NC_017856.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 284366 12844615 Q7C_286 Methylophaga frappieri 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_006292152.1 283884 R 754477 CDS YP_006292153.1 387129263 12844616 complement(284363..285070) 1 NC_017856.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 285070 12844616 Q7C_287 Methylophaga frappieri 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006292153.1 284363 R 754477 CDS YP_006292154.1 387129264 12844617 complement(285063..285347) 1 NC_017856.1 PFAM: Septum formation initiator; Cell division protein FtsB 285347 12844617 Q7C_288 Methylophaga frappieri Cell division protein FtsB YP_006292154.1 285063 R 754477 CDS YP_006292155.1 387129265 12844618 complement(285360..286637) 1 NC_017856.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 286637 12844618 Q7C_289 Methylophaga frappieri enolase YP_006292155.1 285360 R 754477 CDS YP_006292156.1 387129266 12844619 complement(286677..287513) 1 NC_017856.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase 287513 12844619 Q7C_290 Methylophaga frappieri 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase YP_006292156.1 286677 R 754477 CDS YP_006292157.1 387129267 12844620 complement(287516..289150) 1 NC_017856.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 289150 12844620 Q7C_291 Methylophaga frappieri CTP synthase YP_006292157.1 287516 R 754477 CDS YP_006292158.1 387129268 12844621 complement(289233..290573) 1 NC_017856.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 290573 12844621 Q7C_292 Methylophaga frappieri tRNA(Ile)-lysidine synthetase YP_006292158.1 289233 R 754477 CDS YP_006292159.1 387129269 12844622 complement(290585..291541) 1 NC_017856.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxyl transferase subunit alpha 291541 12844622 Q7C_293 Methylophaga frappieri acetyl-coenzyme A carboxyl transferase subunit alpha YP_006292159.1 290585 R 754477 CDS YP_006292160.1 387129270 12844623 complement(291602..292741) 1 NC_017856.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT 292741 12844623 Q7C_294 Methylophaga frappieri Twitching motility protein PilT YP_006292160.1 291602 R 754477 CDS YP_006292161.1 387129271 12844624 complement(292787..296263) 1 NC_017856.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 296263 12844624 Q7C_295 Methylophaga frappieri DNA polymerase III subunit alpha YP_006292161.1 292787 R 754477 CDS YP_006292162.1 387129272 12844625 complement(296345..297394) 1 NC_017856.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta N-acetyl-glucosaminidase 297394 12844625 Q7C_296 Methylophaga frappieri Beta N-acetyl-glucosaminidase YP_006292162.1 296345 R 754477 CDS YP_006292163.1 387129273 12844626 complement(297401..297892) 1 NC_017856.1 PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 297892 12844626 Q7C_297 Methylophaga frappieri hypothetical protein YP_006292163.1 297401 R 754477 CDS YP_006292164.1 387129274 12844627 complement(298035..298928) 1 NC_017856.1 MxaL protein 298928 12844627 Q7C_298 Methylophaga frappieri MxaL protein YP_006292164.1 298035 R 754477 CDS YP_006292165.1 387129275 12844628 complement(298970..299479) 1 NC_017856.1 hypothetical protein 299479 12844628 Q7C_299 Methylophaga frappieri hypothetical protein YP_006292165.1 298970 R 754477 CDS YP_006292166.1 387129276 12844629 complement(299502..300518) 1 NC_017856.1 PFAM: von Willebrand factor type A domain; MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase 300518 12844629 Q7C_300 Methylophaga frappieri MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase YP_006292166.1 299502 R 754477 CDS YP_006292167.1 387129277 12844630 complement(300515..301381) 1 NC_017856.1 hypothetical protein 301381 12844630 Q7C_301 Methylophaga frappieri hypothetical protein YP_006292167.1 300515 R 754477 CDS YP_006292168.1 387129278 12844631 complement(301394..302290) 1 NC_017856.1 MxaS-like protein 302290 12844631 Q7C_302 Methylophaga frappieri MxaS-like protein YP_006292168.1 301394 R 754477 CDS YP_006292169.1 387129279 12844632 complement(302294..303313) 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 303313 12844632 Q7C_303 Methylophaga frappieri MoxR-like ATPase YP_006292169.1 302294 R 754477 CDS YP_006292170.1 387129280 12844633 complement(303353..303763) 1 NC_017856.1 hypothetical protein 303763 12844633 Q7C_304 Methylophaga frappieri hypothetical protein YP_006292170.1 303353 R 754477 CDS YP_006292171.1 387129281 12844634 303937..305289 1 NC_017856.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific 305289 12844634 Q7C_305 Methylophaga frappieri signal transduction histidine kinase, glucose-6-phosphate specific YP_006292171.1 303937 D 754477 CDS YP_006292172.1 387129282 12844635 305286..305957 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator 305957 12844635 Q7C_306 Methylophaga frappieri two-component response regulator YP_006292172.1 305286 D 754477 CDS YP_006292173.1 387129283 12844636 complement(305962..307533) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; Alkyl hydroperoxide reductase protein F 307533 12844636 Q7C_307 Methylophaga frappieri Alkyl hydroperoxide reductase protein F YP_006292173.1 305962 R 754477 CDS YP_006292174.1 387129284 12844637 complement(307612..308178) 1 NC_017856.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; Alkyl hydroperoxide reductase protein C 308178 12844637 Q7C_308 Methylophaga frappieri Alkyl hydroperoxide reductase protein C YP_006292174.1 307612 R 754477 CDS YP_006292175.1 387129285 12844638 complement(308446..309753) 1 NC_017856.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 309753 12844638 Q7C_309 Methylophaga frappieri Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006292175.1 308446 R 754477 CDS YP_006292176.1 387129286 12844639 complement(309815..310144) 1 NC_017856.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Iron binding protein IscA for iron-sulfur cluster assembly 310144 12844639 Q7C_310 Methylophaga frappieri Iron binding protein IscA for iron-sulfur cluster assembly YP_006292176.1 309815 R 754477 CDS YP_006292177.1 387129287 12844640 complement(310150..311292) 1 NC_017856.1 PFAM: Aminotransferase class-V; cysteine desulfurase 311292 12844640 Q7C_311 Methylophaga frappieri cysteine desulfurase YP_006292177.1 310150 R 754477 CDS YP_006292178.1 387129288 12844641 complement(311295..311741) 1 NC_017856.1 PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein; Iron-sulfur cluster regulator IscR 311741 12844641 Q7C_312 Methylophaga frappieri Iron-sulfur cluster regulator IscR YP_006292178.1 311295 R 754477 CDS YP_006292179.1 387129289 12844642 complement(311794..312588) 1 NC_017856.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine acetyltransferase 312588 12844642 Q7C_313 Methylophaga frappieri serine acetyltransferase YP_006292179.1 311794 R 754477 CDS YP_006292180.1 387129290 12844643 complement(312585..313319) 1 NC_017856.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA:Cm32/Um32 methyltransferase 313319 12844643 Q7C_314 Methylophaga frappieri tRNA:Cm32/Um32 methyltransferase YP_006292180.1 312585 R 754477 CDS YP_006292181.1 387129291 12844644 complement(313316..314347) 1 NC_017856.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 314347 12844644 Q7C_315 Methylophaga frappieri S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_006292181.1 313316 R 754477 CDS YP_006292182.1 387129292 12844646 complement(314689..314889) 1 NC_017856.1 hypothetical protein 314889 12844646 Q7C_317 Methylophaga frappieri hypothetical protein YP_006292182.1 314689 R 754477 CDS YP_006292183.1 387129293 12844647 complement(314957..317140) 1 NC_017856.1 PFAM: Subtilase family; subtilisin-like serine protease 317140 12844647 Q7C_318 Methylophaga frappieri subtilisin-like serine protease YP_006292183.1 314957 R 754477 CDS YP_006292184.1 387129294 12844648 complement(317137..318246) 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase 318246 12844648 Q7C_319 Methylophaga frappieri ATPase YP_006292184.1 317137 R 754477 CDS YP_006292185.1 387129295 12844649 318248..318370 1 NC_017856.1 hypothetical protein 318370 12844649 Q7C_320 Methylophaga frappieri hypothetical protein YP_006292185.1 318248 D 754477 CDS YP_006292186.1 387129296 12844650 complement(319175..319546) 1 NC_017856.1 transposase 319546 12844650 Q7C_321 Methylophaga frappieri transposase YP_006292186.1 319175 R 754477 CDS YP_006292187.1 387129297 12844651 complement(319579..319875) 1 NC_017856.1 PFAM: Transposase; transposase 319875 12844651 Q7C_322 Methylophaga frappieri transposase YP_006292187.1 319579 R 754477 CDS YP_006292188.1 387129298 12844652 complement(320886..321635) 1 NC_017856.1 PFAM: Nucleoside-specific channel-forming protein, Tsx; nucleoside-binding outer membrane protein 321635 12844652 Q7C_323 Methylophaga frappieri nucleoside-binding outer membrane protein YP_006292188.1 320886 R 754477 CDS YP_006292189.1 387129299 12844653 complement(321695..323680) 1 NC_017856.1 PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); Serine phosphatase RsbU, regulator of sigma subunit 323680 12844653 Q7C_324 Methylophaga frappieri Serine phosphatase RsbU, regulator of sigma subunit YP_006292189.1 321695 R 754477 CDS YP_006292190.1 387129300 12844654 complement(323710..324504) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 324504 12844654 Q7C_325 Methylophaga frappieri diguanylate cyclase YP_006292190.1 323710 R 754477 CDS YP_006292191.1 387129301 12844655 complement(324564..324944) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1987); hypothetical protein 324944 12844655 Q7C_326 Methylophaga frappieri hypothetical protein YP_006292191.1 324564 R 754477 CDS YP_006292192.1 387129302 12844656 complement(324959..325498) 1 NC_017856.1 hypothetical protein 325498 12844656 Q7C_327 Methylophaga frappieri hypothetical protein YP_006292192.1 324959 R 754477 CDS YP_006292193.1 387129303 12844657 complement(325650..326129) 1 NC_017856.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 326129 12844657 Q7C_328 Methylophaga frappieri Bacterioferritin YP_006292193.1 325650 R 754477 CDS YP_006292194.1 387129304 12844658 complement(326375..326596) 1 NC_017856.1 PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 326596 12844658 Q7C_329 Methylophaga frappieri NAD(P)H-nitrite reductase YP_006292194.1 326375 R 754477 CDS YP_006292195.1 387129305 12844659 326747..327445 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein 327445 12844659 Q7C_330 Methylophaga frappieri two-component system regulatory protein YP_006292195.1 326747 D 754477 CDS YP_006292196.1 387129306 12844660 complement(327447..328745) 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein 328745 12844660 Q7C_331 Methylophaga frappieri two-component system sensor protein YP_006292196.1 327447 R 754477 CDS YP_006292197.1 387129307 12844661 complement(328748..329782) 1 NC_017856.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane-fatty-acyl-phospholipid synthase-like protein 329782 12844661 Q7C_332 Methylophaga frappieri Cyclopropane-fatty-acyl-phospholipid synthase-like protein YP_006292197.1 328748 R 754477 CDS YP_006292198.1 387129308 12844662 complement(329769..330542) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1295); hypothetical protein 330542 12844662 Q7C_333 Methylophaga frappieri hypothetical protein YP_006292198.1 329769 R 754477 CDS YP_006292199.1 387129309 12844663 complement(330529..331068) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2878); hypothetical protein 331068 12844663 Q7C_334 Methylophaga frappieri hypothetical protein YP_006292199.1 330529 R 754477 CDS YP_006292200.1 387129310 12844664 complement(331070..332323) 1 NC_017856.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; S-adenosyl-L-methionine dependent methyltransferase 332323 12844664 Q7C_335 Methylophaga frappieri S-adenosyl-L-methionine dependent methyltransferase YP_006292200.1 331070 R 754477 CDS YP_006292201.1 387129311 12844665 complement(332295..333101) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1365); hypothetical protein 333101 12844665 Q7C_336 Methylophaga frappieri hypothetical protein YP_006292201.1 332295 R 754477 CDS YP_006292202.1 387129312 12844666 complement(333091..334353) 1 NC_017856.1 PFAM: Flavin containing amine oxidoreductase; Amine oxidase 334353 12844666 Q7C_337 Methylophaga frappieri Amine oxidase YP_006292202.1 333091 R 754477 CDS YP_006292203.1 387129313 12844667 complement(334350..335270) 1 NC_017856.1 PFAM: Fatty acid desaturase; Fatty acid desaturase, Delta-9 fatty acid desaturase 335270 12844667 Q7C_338 Methylophaga frappieri Fatty acid desaturase, Delta-9 fatty acid desaturase YP_006292203.1 334350 R 754477 CDS YP_006292204.1 387129314 12844668 335478..335957 1 NC_017856.1 hypothetical protein 335957 12844668 Q7C_339 Methylophaga frappieri hypothetical protein YP_006292204.1 335478 D 754477 CDS YP_006292205.1 387129315 12844669 335954..336490 1 NC_017856.1 hypothetical protein 336490 12844669 Q7C_340 Methylophaga frappieri hypothetical protein YP_006292205.1 335954 D 754477 CDS YP_006292206.1 387129316 12844670 complement(336487..337371) 1 NC_017856.1 PFAM: Tetratricopeptide repeat; TPR repeat containing protein 337371 12844670 Q7C_341 Methylophaga frappieri TPR repeat containing protein YP_006292206.1 336487 R 754477 CDS YP_006292207.1 387129317 12844671 complement(337356..338798) 1 NC_017856.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; Aspartokinase associated with ectoine biosynthesis 338798 12844671 Q7C_342 Methylophaga frappieri Aspartokinase associated with ectoine biosynthesis YP_006292207.1 337356 R 754477 CDS YP_006292208.1 387129318 12844672 complement(338837..339289) 1 NC_017856.1 PFAM: Ectoine synthase; L-ectoine synthase 339289 12844672 Q7C_343 Methylophaga frappieri L-ectoine synthase YP_006292208.1 338837 R 754477 CDS YP_006292209.1 387129319 12844673 complement(339308..340636) 1 NC_017856.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-pyruvate aminotransferase 340636 12844673 Q7C_344 Methylophaga frappieri Diaminobutyrate-pyruvate aminotransferase YP_006292209.1 339308 R 754477 CDS YP_006292210.1 387129320 12844674 complement(340675..341193) 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase 341193 12844674 Q7C_345 Methylophaga frappieri L-2,4-diaminobutyric acid acetyltransferase YP_006292210.1 340675 R 754477 CDS YP_006292211.1 387129321 12844675 341433..342017 1 NC_017856.1 PFAM: MarR family; regulatory protein associated with the ectoine operon 342017 12844675 Q7C_346 Methylophaga frappieri regulatory protein associated with the ectoine operon YP_006292211.1 341433 D 754477 CDS YP_006292212.1 387129322 12844676 complement(342020..343066) 1 NC_017856.1 PFAM: Aldo/keto reductase family; aldo/keto reductase 343066 12844676 Q7C_347 Methylophaga frappieri aldo/keto reductase YP_006292212.1 342020 R 754477 CDS YP_006292213.1 387129323 12844677 complement(343187..344092) 1 NC_017856.1 PFAM: Putative neutral zinc metallopeptidase; YpfJ protein, zinc metalloprotease superfamily 344092 12844677 Q7C_348 Methylophaga frappieri YpfJ protein, zinc metalloprotease superfamily YP_006292213.1 343187 R 754477 CDS YP_006292214.1 387129324 12844679 complement(344364..346700) 1 NC_017856.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 346700 12844679 Q7C_350 Methylophaga frappieri phosphoenolpyruvate synthase YP_006292214.1 344364 R 754477 CDS YP_006292215.1 387129325 12844680 complement(346742..347533) 1 NC_017856.1 PFAM: Domain of unknown function (DUF299); hypothetical protein 347533 12844680 Q7C_351 Methylophaga frappieri hypothetical protein YP_006292215.1 346742 R 754477 CDS YP_006292216.1 387129326 12844681 complement(347894..348256) 1 NC_017856.1 PFAM: MerR family regulatory protein; MerR family transcriptional regulator 348256 12844681 Q7C_352 Methylophaga frappieri MerR family transcriptional regulator YP_006292216.1 347894 R 754477 CDS YP_006292217.1 387129327 12844682 complement(348240..348536) 1 NC_017856.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; integration host factor subunit alpha 348536 12844682 Q7C_353 Methylophaga frappieri integration host factor subunit alpha YP_006292217.1 348240 R 754477 CDS YP_006292218.1 387129328 12844683 complement(348573..350948) 1 NC_017856.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 350948 12844683 Q7C_354 Methylophaga frappieri phenylalanyl-tRNA synthetase subunit beta YP_006292218.1 348573 R 754477 CDS YP_006292219.1 387129329 12844684 complement(350964..352001) 1 NC_017856.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 352001 12844684 Q7C_355 Methylophaga frappieri phenylalanyl-tRNA synthetase subunit alpha YP_006292219.1 350964 R 754477 CDS YP_006292220.1 387129330 12844685 complement(352110..352469) 1 NC_017856.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 352469 12844685 Q7C_356 Methylophaga frappieri 50S ribosomal protein L20 YP_006292220.1 352110 R 754477 CDS YP_006292221.1 387129331 12844686 complement(352485..352682) 1 NC_017856.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 352682 12844686 Q7C_357 Methylophaga frappieri 50S ribosomal protein L35 YP_006292221.1 352485 R 754477 CDS YP_006292222.1 387129332 12844687 complement(352712..353140) 1 NC_017856.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 353140 12844687 Q7C_358 Methylophaga frappieri translation initiation factor 3 YP_006292222.1 352712 R 754477 CDS YP_006292223.1 387129333 12844688 complement(353232..355160) 1 NC_017856.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; Threonyl-tRNA synthetase 355160 12844688 Q7C_359 Methylophaga frappieri Threonyl-tRNA synthetase YP_006292223.1 353232 R 754477 CDS YP_006292224.1 387129334 12844690 complement(355363..357375) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B 357375 12844690 Q7C_361 Methylophaga frappieri excinuclease ABC subunit B YP_006292224.1 355363 R 754477 CDS YP_006292225.1 387129335 12844691 357451..358641 1 NC_017856.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 358641 12844691 Q7C_362 Methylophaga frappieri Aspartate aminotransferase YP_006292225.1 357451 D 754477 CDS YP_006292226.1 387129336 12844693 complement(358876..359901) 1 NC_017856.1 AraC family transcriptional regulator 359901 12844693 Q7C_364 Methylophaga frappieri AraC family transcriptional regulator YP_006292226.1 358876 R 754477 CDS YP_006292227.1 387129337 12844694 complement(359904..360818) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 360818 12844694 Q7C_365 Methylophaga frappieri diguanylate cyclase YP_006292227.1 359904 R 754477 CDS YP_006292228.1 387129338 12844695 complement(361031..361201) 1 NC_017856.1 hypothetical protein 361201 12844695 Q7C_366 Methylophaga frappieri hypothetical protein YP_006292228.1 361031 R 754477 CDS YP_006292229.1 387129339 12844696 361188..363707 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor; TonB-dependent receptor 363707 12844696 Q7C_367 Methylophaga frappieri TonB-dependent receptor YP_006292229.1 361188 D 754477 CDS YP_006292230.1 387129340 12844697 363798..365651 1 NC_017856.1 PFAM: Phytase; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) 365651 12844697 Q7C_368 Methylophaga frappieri 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_006292230.1 363798 D 754477 CDS YP_006292231.1 387129341 12844698 365667..366362 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; MotA/TolQ/ExbB proton channel family protein 366362 12844698 Q7C_369 Methylophaga frappieri MotA/TolQ/ExbB proton channel family protein YP_006292231.1 365667 D 754477 CDS YP_006292232.1 387129342 12844699 366415..366825 1 NC_017856.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; Tol biopolymer transport system, TolR protein 366825 12844699 Q7C_370 Methylophaga frappieri Tol biopolymer transport system, TolR protein YP_006292232.1 366415 D 754477 CDS YP_006292233.1 387129343 12844700 366815..367642 1 NC_017856.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 367642 12844700 Q7C_371 Methylophaga frappieri Ferric siderophore transport system, periplasmic binding protein TonB YP_006292233.1 366815 D 754477 CDS YP_006292234.1 387129344 12844701 367709..369604 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF839); phosphatase 369604 12844701 Q7C_372 Methylophaga frappieri phosphatase YP_006292234.1 367709 D 754477 CDS YP_006292235.1 387129345 12844702 complement(369889..371193) 1 NC_017856.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; Methyl-accepting chemotaxis protein 371193 12844702 Q7C_373 Methylophaga frappieri Methyl-accepting chemotaxis protein YP_006292235.1 369889 R 754477 CDS YP_006292236.1 387129346 12844703 371608..373401 1 NC_017856.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; Sulfite reductase (NADPH) flavoprotein alpha-component 373401 12844703 Q7C_374 Methylophaga frappieri Sulfite reductase (NADPH) flavoprotein alpha-component YP_006292236.1 371608 D 754477 CDS YP_006292237.1 387129347 12844704 373404..375107 1 NC_017856.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; Sulfite reductase (NADPH) hemoprotein beta-component 375107 12844704 Q7C_375 Methylophaga frappieri Sulfite reductase (NADPH) hemoprotein beta-component YP_006292237.1 373404 D 754477 CDS YP_006292238.1 387129348 12844705 375132..376364 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Oxidoreductase (flavoprotein) 376364 12844705 Q7C_376 Methylophaga frappieri Oxidoreductase (flavoprotein) YP_006292238.1 375132 D 754477 CDS YP_006292239.1 387129349 12844706 376463..377164 1 NC_017856.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; 4'-phosphopantetheinyl transferase entD( ) 377164 12844706 Q7C_377 Methylophaga frappieri 4'-phosphopantetheinyl transferase entD( ) YP_006292239.1 376463 D 754477 CDS YP_006292240.1 387129350 12844707 complement(377212..378531) 1 NC_017856.1 hypothetical protein 378531 12844707 Q7C_378 Methylophaga frappieri hypothetical protein YP_006292240.1 377212 R 754477 CDS YP_006292241.1 387129351 12844708 complement(378549..379325) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1329); outer membrane lipoprotein-sorting protein 379325 12844708 Q7C_379 Methylophaga frappieri outer membrane lipoprotein-sorting protein YP_006292241.1 378549 R 754477 CDS YP_006292242.1 387129352 12844709 complement(379373..379552) 1 NC_017856.1 hypothetical protein 379552 12844709 Q7C_380 Methylophaga frappieri hypothetical protein YP_006292242.1 379373 R 754477 CDS YP_006292243.1 387129353 12844710 complement(379543..381663) 1 NC_017856.1 PFAM: MMPL family; RND superfamily exporter 381663 12844710 Q7C_381 Methylophaga frappieri RND superfamily exporter YP_006292243.1 379543 R 754477 CDS YP_006292244.1 387129354 12844711 complement(381688..383445) 1 NC_017856.1 PFAM: ABC transporter transmembrane region; ABC transporter; HlyB/MsbA family ABC transporter 383445 12844711 Q7C_382 Methylophaga frappieri HlyB/MsbA family ABC transporter YP_006292244.1 381688 R 754477 CDS YP_006292245.1 387129355 12844712 complement(383438..385225) 1 NC_017856.1 PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter ATP-binding protein/permease 385225 12844712 Q7C_383 Methylophaga frappieri ABC transporter ATP-binding protein/permease YP_006292245.1 383438 R 754477 CDS YP_006292246.1 387129356 12844713 385621..388626 1 NC_017856.1 PFAM: chorismate binding enzyme; AMP-binding enzyme; TIGRFAM: salicylate synthase; 2,3-dihydroxybenzoate-AMP ligase; iron aquisition 2,3-dihydroxybenzoate-AMP ligase 388626 12844713 Q7C_384 Methylophaga frappieri iron aquisition 2,3-dihydroxybenzoate-AMP ligase YP_006292246.1 385621 D 754477 CDS YP_006292247.1 387129357 12844714 388626..398468 1 NC_017856.1 PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; iron aquisition yersiniabactin synthesis enzyme (Irp2) 398468 12844714 Q7C_385 Methylophaga frappieri iron aquisition yersiniabactin synthesis enzyme (Irp2) YP_006292247.1 388626 D 754477 CDS YP_006292248.1 387129358 12844715 398465..403024 1 NC_017856.1 PFAM: Phosphopantetheine attachment site; Male sterility protein; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; thioester reductase domain; putative non-ribosomal peptide synthetase 403024 12844715 Q7C_386 Methylophaga frappieri putative non-ribosomal peptide synthetase YP_006292248.1 398465 D 754477 CDS YP_006292249.1 387129359 12844716 403081..403896 1 NC_017856.1 PFAM: Thioesterase domain; thioesterase 403896 12844716 Q7C_387 Methylophaga frappieri thioesterase YP_006292249.1 403081 D 754477 CDS YP_006292250.1 387129360 12844717 403998..404957 1 NC_017856.1 PFAM: Periplasmic binding protein; ABC-type transporter, periplasmic component 404957 12844717 Q7C_388 Methylophaga frappieri ABC-type transporter, periplasmic component YP_006292250.1 403998 D 754477 CDS YP_006292251.1 387129361 12844718 404982..405989 1 NC_017856.1 PFAM: FecCD transport family; iron chelate uptake ABC transporter (FeCT) family, permease protein 405989 12844718 Q7C_389 Methylophaga frappieri iron chelate uptake ABC transporter (FeCT) family, permease protein YP_006292251.1 404982 D 754477 CDS YP_006292252.1 387129362 12844719 406127..407077 1 NC_017856.1 PFAM: FecCD transport family; transport system permease 407077 12844719 Q7C_390 Methylophaga frappieri transport system permease YP_006292252.1 406127 D 754477 CDS YP_006292253.1 387129363 12844720 407077..407880 1 NC_017856.1 PFAM: ABC transporter; The iron-vibriobactin/enterobactin uptake porter 407880 12844720 Q7C_391 Methylophaga frappieri The iron-vibriobactin/enterobactin uptake porter YP_006292253.1 407077 D 754477 CDS YP_006292254.1 387129364 12844721 407907..408782 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 408782 12844721 Q7C_392 Methylophaga frappieri ABC transporter ATP-binding protein YP_006292254.1 407907 D 754477 CDS YP_006292255.1 387129365 12844722 408798..412442 1 NC_017856.1 hypothetical protein 412442 12844722 Q7C_393 Methylophaga frappieri hypothetical protein YP_006292255.1 408798 D 754477 CDS YP_006292256.1 387129366 12844723 412489..412719 1 NC_017856.1 PFAM: Phosphopantetheine attachment site; aryl carrier domain-containing protein 412719 12844723 Q7C_394 Methylophaga frappieri aryl carrier domain-containing protein YP_006292256.1 412489 D 754477 CDS YP_006292257.1 387129367 12844724 412774..414168 1 NC_017856.1 hypothetical protein 414168 12844724 Q7C_395 Methylophaga frappieri hypothetical protein YP_006292257.1 412774 D 754477 CDS YP_006292258.1 387129368 12844725 414302..416428 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 416428 12844725 Q7C_396 Methylophaga frappieri TonB-dependent receptor YP_006292258.1 414302 D 754477 CDS YP_006292259.1 387129369 12844726 416594..417667 1 NC_017856.1 PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase-like oxidoreductase 417667 12844726 Q7C_397 Methylophaga frappieri saccharopine dehydrogenase-like oxidoreductase YP_006292259.1 416594 D 754477 CDS YP_006292260.1 387129370 12844727 417678..419588 1 NC_017856.1 PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase-like oxidoreductase 419588 12844727 Q7C_398 Methylophaga frappieri saccharopine dehydrogenase-like oxidoreductase YP_006292260.1 417678 D 754477 CDS YP_006292261.1 387129371 12844728 complement(419643..420569) 1 NC_017856.1 DNA-binding domain-containing protein 420569 12844728 Q7C_399 Methylophaga frappieri DNA-binding domain-containing protein YP_006292261.1 419643 R 754477 CDS YP_006292262.1 387129372 12844729 420820..422478 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ABC transporter ATP-binding protein 422478 12844729 Q7C_400 Methylophaga frappieri ABC transporter ATP-binding protein YP_006292262.1 420820 D 754477 CDS YP_006292263.1 387129373 12844730 422530..422793 1 NC_017856.1 hypothetical protein 422793 12844730 Q7C_401 Methylophaga frappieri hypothetical protein YP_006292263.1 422530 D 754477 CDS YP_006292264.1 387129374 12844731 423002..424762 1 NC_017856.1 PFAM: Sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; D-glycerate 3-kinase , plant type 424762 12844731 Q7C_402 Methylophaga frappieri D-glycerate 3-kinase , plant type YP_006292264.1 423002 D 754477 CDS YP_006292265.1 387129375 12844732 424755..425978 1 NC_017856.1 glycosyltransferase 425978 12844732 Q7C_403 Methylophaga frappieri glycosyltransferase YP_006292265.1 424755 D 754477 CDS YP_006292266.1 387129376 12844733 425975..427726 1 NC_017856.1 PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 427726 12844733 Q7C_404 Methylophaga frappieri sucrose phosphorylase YP_006292266.1 425975 D 754477 CDS YP_006292267.1 387129377 12844734 427797..428648 1 NC_017856.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 428648 12844734 Q7C_405 Methylophaga frappieri UTP--glucose-1-phosphate uridylyltransferase YP_006292267.1 427797 D 754477 CDS YP_006292268.1 387129378 12844735 428664..429200 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator containing a CheY-like receiver domain and a GGDEF domain 429200 12844735 Q7C_406 Methylophaga frappieri response regulator containing a CheY-like receiver domain and a GGDEF domain YP_006292268.1 428664 D 754477 CDS YP_006292269.1 387129379 12844736 complement(429383..429520) 1 NC_017856.1 hypothetical protein 429520 12844736 Q7C_407 Methylophaga frappieri hypothetical protein YP_006292269.1 429383 R 754477 CDS YP_006292270.1 387129380 12844737 429651..431378 1 NC_017856.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; cyanophycin synthetase 431378 12844737 Q7C_408 Methylophaga frappieri cyanophycin synthetase YP_006292270.1 429651 D 754477 CDS YP_006292271.1 387129381 12844738 431375..432880 1 NC_017856.1 PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 432880 12844738 Q7C_409 Methylophaga frappieri long-chain-fatty-acid--CoA ligase YP_006292271.1 431375 D 754477 CDS YP_006292272.1 387129382 12844739 complement(432950..434287) 1 NC_017856.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; TrmA family RNA methyltransferase 434287 12844739 Q7C_410 Methylophaga frappieri TrmA family RNA methyltransferase YP_006292272.1 432950 R 754477 CDS YP_006292273.1 387129383 12844740 complement(434353..434946) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1318); hypothetical protein 434946 12844740 Q7C_411 Methylophaga frappieri hypothetical protein YP_006292273.1 434353 R 754477 CDS YP_006292274.1 387129384 12844741 complement(434957..437017) 1 NC_017856.1 hypothetical protein 437017 12844741 Q7C_412 Methylophaga frappieri hypothetical protein YP_006292274.1 434957 R 754477 CDS YP_006292275.1 387129385 12844742 complement(437017..437901) 1 NC_017856.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; Cysteine synthase B 437901 12844742 Q7C_413 Methylophaga frappieri Cysteine synthase B YP_006292275.1 437017 R 754477 CDS YP_006292276.1 387129386 12844743 complement(437901..438287) 1 NC_017856.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase; Holo-(acyl-carrier protein) synthase 438287 12844743 Q7C_414 Methylophaga frappieri Holo-(acyl-carrier protein) synthase YP_006292276.1 437901 R 754477 CDS YP_006292277.1 387129387 12844744 complement(438284..439012) 1 NC_017856.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 439012 12844744 Q7C_415 Methylophaga frappieri pyridoxine 5'-phosphate synthase YP_006292277.1 438284 R 754477 CDS YP_006292278.1 387129388 12844745 complement(439009..439743) 1 NC_017856.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA recombination and repair protein RecO 439743 12844745 Q7C_416 Methylophaga frappieri DNA recombination and repair protein RecO YP_006292278.1 439009 R 754477 CDS YP_006292279.1 387129389 12844746 complement(439752..440657) 1 NC_017856.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 440657 12844746 Q7C_417 Methylophaga frappieri GTP-binding protein Era YP_006292279.1 439752 R 754477 CDS YP_006292280.1 387129390 12844747 complement(440654..441337) 1 NC_017856.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; Ribonuclease III 441337 12844747 Q7C_418 Methylophaga frappieri Ribonuclease III YP_006292280.1 440654 R 754477 CDS YP_006292281.1 387129391 12844748 complement(441334..441723) 1 NC_017856.1 hypothetical protein 441723 12844748 Q7C_419 Methylophaga frappieri hypothetical protein YP_006292281.1 441334 R 754477 CDS YP_006292282.1 387129392 12844749 complement(441734..442495) 1 NC_017856.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Signal peptidase I 442495 12844749 Q7C_420 Methylophaga frappieri Signal peptidase I YP_006292282.1 441734 R 754477 CDS YP_006292283.1 387129393 12844750 complement(442511..444307) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; translation elongation factor LepA 444307 12844750 Q7C_421 Methylophaga frappieri translation elongation factor LepA YP_006292283.1 442511 R 754477 CDS YP_006292284.1 387129394 12844751 complement(444533..446449) 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein 446449 12844751 Q7C_422 Methylophaga frappieri TonB-dependent heme/hemoglobin receptor family protein YP_006292284.1 444533 R 754477 CDS YP_006292285.1 387129395 12844752 complement(446623..447984) 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 447984 12844752 Q7C_423 Methylophaga frappieri integral membrane sensor signal transduction histidine kinase YP_006292285.1 446623 R 754477 CDS YP_006292286.1 387129396 12844753 complement(447981..448664) 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 448664 12844753 Q7C_424 Methylophaga frappieri Copper-sensing two-component system response regulator CpxR YP_006292286.1 447981 R 754477 CDS YP_006292287.1 387129397 12844754 complement(448788..450221) 1 NC_017856.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Serine protease MucD/AlgY associated with sigma factor RpoE 450221 12844754 Q7C_425 Methylophaga frappieri Serine protease MucD/AlgY associated with sigma factor RpoE YP_006292287.1 448788 R 754477 CDS YP_006292288.1 387129398 12844755 complement(450218..450643) 1 NC_017856.1 PFAM: Positive regulator of sigma(E), RseC/MucC; Sigma factor RpoE regulatory protein RseC 450643 12844755 Q7C_426 Methylophaga frappieri Sigma factor RpoE regulatory protein RseC YP_006292288.1 450218 R 754477 CDS YP_006292289.1 387129399 12844756 complement(450640..451620) 1 NC_017856.1 PFAM: MucB/RseB family; Sigma factor RpoE negative regulatory protein RseB precursor 451620 12844756 Q7C_427 Methylophaga frappieri Sigma factor RpoE negative regulatory protein RseB precursor YP_006292289.1 450640 R 754477 CDS YP_006292290.1 387129400 12844757 complement(451623..452198) 1 NC_017856.1 PFAM: Anti sigma-E protein RseA, N-terminal domain; Anti sigma-E protein RseA 452198 12844757 Q7C_428 Methylophaga frappieri Anti sigma-E protein RseA YP_006292290.1 451623 R 754477 CDS YP_006292291.1 387129401 12844758 complement(452202..452777) 1 NC_017856.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE; RNA polymerase sigma factor RpoE 452777 12844758 Q7C_429 Methylophaga frappieri RNA polymerase sigma factor RpoE YP_006292291.1 452202 R 754477 CDS YP_006292292.1 387129402 12844759 452900..454510 1 NC_017856.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 454510 12844759 Q7C_430 Methylophaga frappieri L-aspartate oxidase YP_006292292.1 452900 D 754477 CDS YP_006292293.1 387129403 12844760 complement(454485..454838) 1 NC_017856.1 hypothetical protein 454838 12844760 Q7C_431 Methylophaga frappieri hypothetical protein YP_006292293.1 454485 R 754477 CDS YP_006292294.1 387129404 12844761 454967..455863 1 NC_017856.1 PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 455863 12844761 Q7C_432 Methylophaga frappieri Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress YP_006292294.1 454967 D 754477 CDS YP_006292295.1 387129405 12844762 complement(455860..457245) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; type IV fimbriae expression regulatory protein PilR 457245 12844762 Q7C_433 Methylophaga frappieri type IV fimbriae expression regulatory protein PilR YP_006292295.1 455860 R 754477 CDS YP_006292296.1 387129406 12844763 complement(457242..458819) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor PilS 458819 12844763 Q7C_434 Methylophaga frappieri Two-component sensor PilS YP_006292296.1 457242 R 754477 CDS YP_006292297.1 387129407 12844764 complement(458812..459045) 1 NC_017856.1 hypothetical protein 459045 12844764 Q7C_435 Methylophaga frappieri hypothetical protein YP_006292297.1 458812 R 754477 CDS YP_006292298.1 387129408 12844765 complement(459108..460937) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA 460937 12844765 Q7C_436 Methylophaga frappieri GTP-binding protein TypA/BipA YP_006292298.1 459108 R 754477 CDS YP_006292299.1 387129409 12844766 complement(461000..461794) 1 NC_017856.1 PFAM: Inositol monophosphatase family; Inositol-1-monophosphatase 461794 12844766 Q7C_437 Methylophaga frappieri Inositol-1-monophosphatase YP_006292299.1 461000 R 754477 CDS YP_006292300.1 387129410 12844767 462025..462324 1 NC_017856.1 PFAM: Protein of unknown function (DUF3359); hypothetical protein 462324 12844767 Q7C_438 Methylophaga frappieri hypothetical protein YP_006292300.1 462025 D 754477 CDS YP_006292301.1 387129411 12844768 complement(462389..463552) 1 NC_017856.1 PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG family protein 463552 12844768 Q7C_439 Methylophaga frappieri ErfK/YbiS/YcfS/YnhG family protein YP_006292301.1 462389 R 754477 CDS YP_006292302.1 387129412 12844769 463694..464476 1 NC_017856.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) 464476 12844769 Q7C_440 Methylophaga frappieri component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) YP_006292302.1 463694 D 754477 CDS YP_006292303.1 387129413 12844770 complement(464526..464864) 1 NC_017856.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 464864 12844770 Q7C_441 Methylophaga frappieri nitrogen regulatory protein P-II YP_006292303.1 464526 R 754477 CDS YP_006292304.1 387129414 12844771 complement(464874..466514) 1 NC_017856.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD synthetase glutamine amidotransferase subunit 466514 12844771 Q7C_442 Methylophaga frappieri NAD synthetase glutamine amidotransferase subunit YP_006292304.1 464874 R 754477 CDS YP_006292305.1 387129415 12844772 complement(466511..467392) 1 NC_017856.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA ligase (ADP-forming) subunit alpha 467392 12844772 Q7C_443 Methylophaga frappieri succinyl-CoA ligase (ADP-forming) subunit alpha YP_006292305.1 466511 R 754477 CDS YP_006292306.1 387129416 12844773 complement(467389..468561) 1 NC_017856.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta 468561 12844773 Q7C_444 Methylophaga frappieri succinyl-CoA ligase (ADP-forming) subunit beta YP_006292306.1 467389 R 754477 CDS YP_006292307.1 387129417 12844774 468693..469289 1 NC_017856.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; proline iminopeptidase 469289 12844774 Q7C_445 Methylophaga frappieri proline iminopeptidase YP_006292307.1 468693 D 754477 CDS YP_006292308.1 387129418 12844775 469537..469665 1 NC_017856.1 hypothetical protein 469665 12844775 Q7C_446 Methylophaga frappieri hypothetical protein YP_006292308.1 469537 D 754477 CDS YP_006292309.1 387129419 12844776 469662..470099 1 NC_017856.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 470099 12844776 Q7C_447 Methylophaga frappieri D-tyrosyl-tRNA(Tyr) deacylase YP_006292309.1 469662 D 754477 CDS YP_006292310.1 387129420 12844777 470103..470726 1 NC_017856.1 hypothetical protein 470726 12844777 Q7C_448 Methylophaga frappieri hypothetical protein YP_006292310.1 470103 D 754477 CDS YP_006292311.1 387129421 12844778 complement(470714..473650) 1 NC_017856.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 473650 12844778 Q7C_449 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292311.1 470714 R 754477 CDS YP_006292312.1 387129422 12844779 complement(473681..473851) 1 NC_017856.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion 473851 12844779 Q7C_450 Methylophaga frappieri type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion YP_006292312.1 473681 R 754477 CDS YP_006292313.1 387129423 12844780 complement(473894..476341) 1 NC_017856.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; Heavy metal translocating P-type ATPase 476341 12844780 Q7C_451 Methylophaga frappieri Heavy metal translocating P-type ATPase YP_006292313.1 473894 R 754477 CDS YP_006292314.1 387129424 12844781 complement(476361..476864) 1 NC_017856.1 PFAM: FixH; integral membrane protein linked to a cation pump 476864 12844781 Q7C_452 Methylophaga frappieri integral membrane protein linked to a cation pump YP_006292314.1 476361 R 754477 CDS YP_006292315.1 387129425 12844782 complement(476864..478285) 1 NC_017856.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG 478285 12844782 Q7C_453 Methylophaga frappieri type cbb3 cytochrome oxidase biogenesis protein CcoG YP_006292315.1 476864 R 754477 CDS YP_006292316.1 387129426 12844783 478274..478402 1 NC_017856.1 hypothetical protein 478402 12844783 Q7C_454 Methylophaga frappieri hypothetical protein YP_006292316.1 478274 D 754477 CDS YP_006292317.1 387129427 12844784 complement(478418..478540) 1 NC_017856.1 hypothetical protein 478540 12844784 Q7C_455 Methylophaga frappieri hypothetical protein YP_006292317.1 478418 R 754477 CDS YP_006292318.1 387129428 12844785 complement(478585..479511) 1 NC_017856.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; Cytochrome c oxidase subunit CcoP 479511 12844785 Q7C_456 Methylophaga frappieri Cytochrome c oxidase subunit CcoP YP_006292318.1 478585 R 754477 CDS YP_006292319.1 387129429 12844786 complement(479504..479716) 1 NC_017856.1 PFAM: Cbb3-type cytochrome oxidase component FixQ; Cbb3-type cytochrome oxidase component FixQ 479716 12844786 Q7C_457 Methylophaga frappieri Cbb3-type cytochrome oxidase component FixQ YP_006292319.1 479504 R 754477 CDS YP_006292320.1 387129430 12844787 complement(479709..480386) 1 NC_017856.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; Cytochrome c oxidase subunit CcoO 480386 12844787 Q7C_458 Methylophaga frappieri Cytochrome c oxidase subunit CcoO YP_006292320.1 479709 R 754477 CDS YP_006292321.1 387129431 12844788 complement(480397..481821) 1 NC_017856.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Cytochrome c oxidase subunit CcoN 481821 12844788 Q7C_459 Methylophaga frappieri Cytochrome c oxidase subunit CcoN YP_006292321.1 480397 R 754477 CDS YP_006292322.1 387129432 12844789 complement(482140..482544) 1 NC_017856.1 PFAM: Protein of unknown function (DUF498/DUF598); hypothetical protein 482544 12844789 Q7C_460 Methylophaga frappieri hypothetical protein YP_006292322.1 482140 R 754477 CDS YP_006292323.1 387129433 12844790 complement(482548..482841) 1 NC_017856.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; integration host factor subunit beta 482841 12844790 Q7C_461 Methylophaga frappieri integration host factor subunit beta YP_006292323.1 482548 R 754477 CDS YP_006292324.1 387129434 12844791 complement(482960..484633) 1 NC_017856.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 484633 12844791 Q7C_462 Methylophaga frappieri 30S ribosomal protein S1 YP_006292324.1 482960 R 754477 CDS YP_006292325.1 387129435 12844792 complement(484752..485417) 1 NC_017856.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 485417 12844792 Q7C_463 Methylophaga frappieri cytidylate kinase YP_006292325.1 484752 R 754477 CDS YP_006292326.1 387129436 12844793 complement(485410..486729) 1 NC_017856.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-Enolpyruvylshikimate-3-phosphate synthase 486729 12844793 Q7C_464 Methylophaga frappieri 5-Enolpyruvylshikimate-3-phosphate synthase YP_006292326.1 485410 R 754477 CDS YP_006292327.1 387129437 12844794 complement(486747..487634) 1 NC_017856.1 PFAM: Prephenate dehydrogenase; cyclohexadienyl dehydrogenase 487634 12844794 Q7C_465 Methylophaga frappieri cyclohexadienyl dehydrogenase YP_006292327.1 486747 R 754477 CDS YP_006292328.1 387129438 12844795 complement(487627..488721) 1 NC_017856.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Biosynthetic Aromatic amino acid aminotransferase beta 488721 12844795 Q7C_466 Methylophaga frappieri Biosynthetic Aromatic amino acid aminotransferase beta YP_006292328.1 487627 R 754477 CDS YP_006292329.1 387129439 12844796 complement(488718..489185) 1 NC_017856.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 489185 12844796 Q7C_467 Methylophaga frappieri lipoprotein signal peptidase YP_006292329.1 488718 R 754477 CDS YP_006292330.1 387129440 12844797 complement(489192..491930) 1 NC_017856.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 491930 12844797 Q7C_468 Methylophaga frappieri isoleucyl-tRNA synthetase YP_006292330.1 489192 R 754477 CDS YP_006292331.1 387129441 12844798 492151..492444 1 NC_017856.1 PFAM: Protein of unknown function (DUF3579); hypothetical protein 492444 12844798 Q7C_469 Methylophaga frappieri hypothetical protein YP_006292331.1 492151 D 754477 CDS YP_006292332.1 387129442 12844799 complement(492448..492900) 1 NC_017856.1 PFAM: CBS domain; Inosine-5'-monophosphate dehydrogenase 492900 12844799 Q7C_470 Methylophaga frappieri Inosine-5'-monophosphate dehydrogenase YP_006292332.1 492448 R 754477 CDS YP_006292333.1 387129443 12844800 complement(493009..495309) 1 NC_017856.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; formate dehydrogenase oxidoreductase protein 495309 12844800 Q7C_471 Methylophaga frappieri formate dehydrogenase oxidoreductase protein YP_006292333.1 493009 R 754477 CDS YP_006292334.1 387129444 12844801 complement(495596..497176) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 497176 12844801 Q7C_472 Methylophaga frappieri peptide chain release factor 3 YP_006292334.1 495596 R 754477 CDS YP_006292335.1 387129445 12844802 complement(497433..497915) 1 NC_017856.1 PFAM: Peptidase S24-like; Phage repressor 497915 12844802 Q7C_473 Methylophaga frappieri Phage repressor YP_006292335.1 497433 R 754477 CDS YP_006292336.1 387129446 12844803 497904..498059 1 NC_017856.1 hypothetical protein 498059 12844803 Q7C_474 Methylophaga frappieri hypothetical protein YP_006292336.1 497904 D 754477 CDS YP_006292337.1 387129447 12844804 498198..498449 1 NC_017856.1 hypothetical protein 498449 12844804 Q7C_475 Methylophaga frappieri hypothetical protein YP_006292337.1 498198 D 754477 CDS YP_006292338.1 387129448 12844806 499360..500022 1 NC_017856.1 FIG01201693; hypothetical protein 500022 12844806 Q7C_478 Methylophaga frappieri hypothetical protein YP_006292338.1 499360 D 754477 CDS YP_006292339.1 387129449 12844807 500009..500557 1 NC_017856.1 PFAM: Transglycosylase SLT domain; hypothetical protein 500557 12844807 Q7C_479 Methylophaga frappieri hypothetical protein YP_006292339.1 500009 D 754477 CDS YP_006292340.1 387129450 12844808 500554..500853 1 NC_017856.1 PFAM: Flagellar transcriptional activator (FlhD); transcriptional activator 500853 12844808 Q7C_480 Methylophaga frappieri transcriptional activator YP_006292340.1 500554 D 754477 CDS YP_006292341.1 387129451 12844809 500850..501383 1 NC_017856.1 PFAM: Flagellar transcriptional activator (FlhC); transcriptional activator 501383 12844809 Q7C_481 Methylophaga frappieri transcriptional activator YP_006292341.1 500850 D 754477 CDS YP_006292342.1 387129452 12844810 501750..501872 1 NC_017856.1 hypothetical protein 501872 12844810 Q7C_482 Methylophaga frappieri hypothetical protein YP_006292342.1 501750 D 754477 CDS YP_006292343.1 387129453 12844811 complement(501905..505474) 1 NC_017856.1 PFAM: TraG-like protein, N-terminal region; IncF plasmid conjugative transfer protein TraG 505474 12844811 Q7C_483 Methylophaga frappieri IncF plasmid conjugative transfer protein TraG YP_006292343.1 501905 R 754477 CDS YP_006292344.1 387129454 12844812 complement(505478..506866) 1 NC_017856.1 PFAM: Conjugative relaxosome accessory transposon protein; IncF plasmid conjugative transfer pilus assembly protein TraH 506866 12844812 Q7C_484 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraH YP_006292344.1 505478 R 754477 CDS YP_006292345.1 387129455 12844813 complement(506869..507813) 1 NC_017856.1 TIGRFAM: TraF-like protein; IncF plasmid conjugative transfer pilus assembly protein TraF 507813 12844813 Q7C_485 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraF YP_006292345.1 506869 R 754477 CDS YP_006292346.1 387129456 12844814 complement(507937..509847) 1 NC_017856.1 hypothetical protein 509847 12844814 Q7C_486 Methylophaga frappieri hypothetical protein YP_006292346.1 507937 R 754477 CDS YP_006292347.1 387129457 12844815 complement(509844..511658) 1 NC_017856.1 recombinase D 511658 12844815 Q7C_487 Methylophaga frappieri recombinase D YP_006292347.1 509844 R 754477 CDS YP_006292348.1 387129458 12844816 512254..512604 1 NC_017856.1 PFAM: IS66 Orf2 like protein; IS66 Orf2 family protein 512604 12844816 Q7C_488 Methylophaga frappieri IS66 Orf2 family protein YP_006292348.1 512254 D 754477 CDS YP_006292349.1 387129459 12844817 512661..514253 1 NC_017856.1 PFAM: Transposase IS66 family; ISPsy5, transposase 514253 12844817 Q7C_489 Methylophaga frappieri ISPsy5, transposase YP_006292349.1 512661 D 754477 CDS YP_006292350.1 387129460 12844818 514417..515913 1 NC_017856.1 PFAM: Putative transposase; transposase InsA 515913 12844818 Q7C_490 Methylophaga frappieri transposase InsA YP_006292350.1 514417 D 754477 CDS YP_006292351.1 387129461 12844819 complement(516452..517879) 1 NC_017856.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 517879 12844819 Q7C_491 Methylophaga frappieri UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_006292351.1 516452 R 754477 CDS YP_006292352.1 387129462 12844820 complement(518209..520305) 1 NC_017856.1 PFAM: Peptidase family M50; peptidase M50 520305 12844820 Q7C_492 Methylophaga frappieri peptidase M50 YP_006292352.1 518209 R 754477 CDS YP_006292353.1 387129463 12844821 complement(520302..521621) 1 NC_017856.1 PFAM: HlyD family secretion protein; Membrane-fusion protein 521621 12844821 Q7C_493 Methylophaga frappieri Membrane-fusion protein YP_006292353.1 520302 R 754477 CDS YP_006292354.1 387129464 12844822 521676..521795 1 NC_017856.1 hypothetical protein 521795 12844822 Q7C_494 Methylophaga frappieri hypothetical protein YP_006292354.1 521676 D 754477 CDS YP_006292355.1 387129465 12844823 complement(521796..522608) 1 NC_017856.1 multidrug resistance efflux pump 522608 12844823 Q7C_495 Methylophaga frappieri multidrug resistance efflux pump YP_006292355.1 521796 R 754477 CDS YP_006292356.1 387129466 12844824 complement(522609..524513) 1 NC_017856.1 PFAM: Outer membrane efflux protein; outer membrane efflux protein 524513 12844824 Q7C_496 Methylophaga frappieri outer membrane efflux protein YP_006292356.1 522609 R 754477 CDS YP_006292357.1 387129467 12844825 complement(524590..527217) 1 NC_017856.1 TIGRFAM: VCBS repeat; VCBS repeat-containing protein 527217 12844825 Q7C_497 Methylophaga frappieri VCBS repeat-containing protein YP_006292357.1 524590 R 754477 CDS YP_006292358.1 387129468 12844826 complement(527243..528154) 1 NC_017856.1 hypothetical protein 528154 12844826 Q7C_498 Methylophaga frappieri hypothetical protein YP_006292358.1 527243 R 754477 CDS YP_006292359.1 387129469 12844827 complement(528114..530972) 1 NC_017856.1 hypothetical protein 530972 12844827 Q7C_499 Methylophaga frappieri hypothetical protein YP_006292359.1 528114 R 754477 CDS YP_006292360.1 387129470 12844828 complement(530975..531403) 1 NC_017856.1 hypothetical protein 531403 12844828 Q7C_500 Methylophaga frappieri hypothetical protein YP_006292360.1 530975 R 754477 CDS YP_006292361.1 387129471 12844829 complement(531561..538856) 1 NC_017856.1 hypothetical protein 538856 12844829 Q7C_501 Methylophaga frappieri hypothetical protein YP_006292361.1 531561 R 754477 CDS YP_006292362.1 387129472 12844830 539303..539458 1 NC_017856.1 PFAM: Protein of unknown function (DUF3461); hypothetical protein 539458 12844830 Q7C_502 Methylophaga frappieri hypothetical protein YP_006292362.1 539303 D 754477 CDS YP_006292363.1 387129473 12844831 complement(539508..541061) 1 NC_017856.1 PFAM: SpoVR like protein; SpoVR-like protein 541061 12844831 Q7C_503 Methylophaga frappieri SpoVR-like protein YP_006292363.1 539508 R 754477 CDS YP_006292364.1 387129474 12844832 541359..542807 1 NC_017856.1 PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; filamentous hemagglutinin 542807 12844832 Q7C_504 Methylophaga frappieri filamentous hemagglutinin YP_006292364.1 541359 D 754477 CDS YP_006292365.1 387129475 12844833 complement(542800..543654) 1 NC_017856.1 recombinase D 543654 12844833 Q7C_505 Methylophaga frappieri recombinase D YP_006292365.1 542800 R 754477 CDS YP_006292366.1 387129476 12844834 complement(544213..544947) 1 NC_017856.1 FIG01203050; hypothetical protein 544947 12844834 Q7C_506 Methylophaga frappieri hypothetical protein YP_006292366.1 544213 R 754477 CDS YP_006292367.1 387129477 12844835 complement(545037..546104) 1 NC_017856.1 PFAM: Zinc-binding domain of primase-helicase; Phage P4 alpha, zinc-binding domain-containing protein 546104 12844835 Q7C_507 Methylophaga frappieri Phage P4 alpha, zinc-binding domain-containing protein YP_006292367.1 545037 R 754477 CDS YP_006292368.1 387129478 12844836 complement(546195..546536) 1 NC_017856.1 FIG01201340; hypothetical protein 546536 12844836 Q7C_508 Methylophaga frappieri hypothetical protein YP_006292368.1 546195 R 754477 CDS YP_006292369.1 387129479 12844837 complement(546536..547033) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 547033 12844837 Q7C_509 Methylophaga frappieri DNA repair protein RadC YP_006292369.1 546536 R 754477 CDS YP_006292370.1 387129480 12844838 complement(547120..548775) 1 NC_017856.1 PFAM: von Willebrand factor type A domain; Cobalamin biosynthesis protein CobT; similar to APECO1_O1R37; Plasmid associated gene product 548775 12844838 Q7C_510 Methylophaga frappieri Plasmid associated gene product YP_006292370.1 547120 R 754477 CDS YP_006292371.1 387129481 12844839 complement(548845..549285) 1 NC_017856.1 FIG01205919; hypothetical protein 549285 12844839 Q7C_511 Methylophaga frappieri hypothetical protein YP_006292371.1 548845 R 754477 CDS YP_006292372.1 387129482 12844840 complement(549347..550300) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3150); Cobalamine biosynthesis protein 550300 12844840 Q7C_512 Methylophaga frappieri Cobalamine biosynthesis protein YP_006292372.1 549347 R 754477 CDS YP_006292373.1 387129483 12844841 complement(550399..551166) 1 NC_017856.1 hypothetical protein 551166 12844841 Q7C_513 Methylophaga frappieri hypothetical protein YP_006292373.1 550399 R 754477 CDS YP_006292374.1 387129484 12844842 complement(551166..552125) 1 NC_017856.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; Aerobic cobaltochelatase CobS subunit 552125 12844842 Q7C_514 Methylophaga frappieri Aerobic cobaltochelatase CobS subunit YP_006292374.1 551166 R 754477 CDS YP_006292375.1 387129485 12844843 complement(552335..553351) 1 NC_017856.1 PFAM: YqaJ-like viral recombinase domain; TIGRFAM: putative phage-type endonuclease; phage-type endonuclease 553351 12844843 Q7C_515 Methylophaga frappieri phage-type endonuclease YP_006292375.1 552335 R 754477 CDS YP_006292376.1 387129486 12844844 complement(553412..553555) 1 NC_017856.1 FIG01200802; hypothetical protein 553555 12844844 Q7C_516 Methylophaga frappieri hypothetical protein YP_006292376.1 553412 R 754477 CDS YP_006292377.1 387129487 12844845 complement(553639..554457) 1 NC_017856.1 PFAM: RecT family; TIGRFAM: phage recombination protein Bet; Recombination protein BET 554457 12844845 Q7C_517 Methylophaga frappieri Recombination protein BET YP_006292377.1 553639 R 754477 CDS YP_006292378.1 387129488 12844846 complement(554567..554956) 1 NC_017856.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein 554956 12844846 Q7C_518 Methylophaga frappieri ssDNA-binding protein YP_006292378.1 554567 R 754477 CDS YP_006292379.1 387129489 12844847 complement(554972..555298) 1 NC_017856.1 FIG01202003; hypothetical protein 555298 12844847 Q7C_519 Methylophaga frappieri hypothetical protein YP_006292379.1 554972 R 754477 CDS YP_006292380.1 387129490 12844848 555666..556268 1 NC_017856.1 FIG01202318; hypothetical protein 556268 12844848 Q7C_520 Methylophaga frappieri hypothetical protein YP_006292380.1 555666 D 754477 CDS YP_006292381.1 387129491 12844849 556596..557417 1 NC_017856.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 557417 12844849 Q7C_521 Methylophaga frappieri glycosyltransferase YP_006292381.1 556596 D 754477 CDS YP_006292382.1 387129492 12844850 557410..560463 1 NC_017856.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 560463 12844850 Q7C_522 Methylophaga frappieri glycosyltransferase YP_006292382.1 557410 D 754477 CDS YP_006292383.1 387129493 12844851 complement(561185..562066) 1 NC_017856.1 PFAM: Radical SAM superfamily; molybdenum cofactor biosynthesis family protein 562066 12844851 Q7C_523 Methylophaga frappieri molybdenum cofactor biosynthesis family protein YP_006292383.1 561185 R 754477 CDS YP_006292384.1 387129494 12844852 complement(562388..566080) 1 NC_017856.1 PFAM: Mating pair stabilisation protein TraN; IncF plasmid conjugative transfer protein TraN 566080 12844852 Q7C_524 Methylophaga frappieri IncF plasmid conjugative transfer protein TraN YP_006292384.1 562388 R 754477 CDS YP_006292385.1 387129495 12844853 complement(566083..567111) 1 NC_017856.1 PFAM: TraU protein; IncF plasmid conjugative transfer pilus assembly protein TraU 567111 12844853 Q7C_525 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraU YP_006292385.1 566083 R 754477 CDS YP_006292386.1 387129496 12844854 complement(567095..568219) 1 NC_017856.1 PFAM: Type-F conjugative transfer system pilin assembly protein; IncF plasmid conjugative transfer pilus assembly protein TraW 568219 12844854 Q7C_526 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraW YP_006292386.1 567095 R 754477 CDS YP_006292387.1 387129497 12844855 complement(568230..568742) 1 NC_017856.1 PFAM: Peptidase S26; Conjugative signal peptidase TrhF 568742 12844855 Q7C_527 Methylophaga frappieri Conjugative signal peptidase TrhF YP_006292387.1 568230 R 754477 CDS YP_006292388.1 387129498 12844856 complement(568726..569073) 1 NC_017856.1 Conjugative transfer protein 345 569073 12844856 Q7C_528 Methylophaga frappieri Conjugative transfer protein 345 YP_006292388.1 568726 R 754477 CDS YP_006292389.1 387129499 12844857 complement(569066..571465) 1 NC_017856.1 PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC; IncF plasmid conjugative transfer pilus assembly protein TraC 571465 12844857 Q7C_529 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraC YP_006292389.1 569066 R 754477 CDS YP_006292390.1 387129500 12844858 complement(571465..572157) 1 NC_017856.1 PFAM: Disulfide bond isomerase protein N-terminus; Thiol:disulfide involved in conjugative transfer 572157 12844858 Q7C_530 Methylophaga frappieri Thiol:disulfide involved in conjugative transfer YP_006292390.1 571465 R 754477 CDS YP_006292391.1 387129501 12844859 complement(572289..573227) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1814); Ync 573227 12844859 Q7C_531 Methylophaga frappieri Ync YP_006292391.1 572289 R 754477 CDS YP_006292392.1 387129502 12844860 complement(573220..574053) 1 NC_017856.1 PFAM: Protein of unknwon function (DUF2893); Ynd 574053 12844860 Q7C_532 Methylophaga frappieri Ynd YP_006292392.1 573220 R 754477 CDS YP_006292393.1 387129503 12844861 complement(574231..574617) 1 NC_017856.1 Conjugative transfer protein TraA 574617 12844861 Q7C_533 Methylophaga frappieri Conjugative transfer protein TraA YP_006292393.1 574231 R 754477 CDS YP_006292394.1 387129504 12844862 complement(574614..575264) 1 NC_017856.1 PFAM: Type IV conjugative transfer system lipoprotein (TraV); TIGRFAM: type IV conjugative transfer system lipoprotein TraV; Conjugative transfer protein TraV 575264 12844862 Q7C_534 Methylophaga frappieri Conjugative transfer protein TraV YP_006292394.1 574614 R 754477 CDS YP_006292395.1 387129505 12844863 complement(575261..576550) 1 NC_017856.1 PFAM: Bacterial conjugation TrbI-like protein; IncF plasmid conjugative transfer pilus assembly protein TraB 576550 12844863 Q7C_535 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraB YP_006292395.1 575261 R 754477 CDS YP_006292396.1 387129506 12844864 complement(576550..577449) 1 NC_017856.1 PFAM: TraK protein; IncF plasmid conjugative transfer pilus assembly protein TraK 577449 12844864 Q7C_536 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraK YP_006292396.1 576550 R 754477 CDS YP_006292397.1 387129507 12844865 complement(577433..578059) 1 NC_017856.1 PFAM: TraE protein; TIGRFAM: type IV conjugative transfer system protein TraE; IncF plasmid conjugative transfer pilus assembly protein TraE 578059 12844865 Q7C_537 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraE YP_006292397.1 577433 R 754477 CDS YP_006292398.1 387129508 12844866 complement(578056..578337) 1 NC_017856.1 PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL; IncF plasmid conjugative transfer pilus assembly protein TraL 578337 12844866 Q7C_538 Methylophaga frappieri IncF plasmid conjugative transfer pilus assembly protein TraL YP_006292398.1 578056 R 754477 CDS YP_006292399.1 387129509 12844867 578518..578841 1 NC_017856.1 PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 578841 12844867 Q7C_539 Methylophaga frappieri hypothetical protein YP_006292399.1 578518 D 754477 CDS YP_006292400.1 387129510 12844868 578838..579116 1 NC_017856.1 transcriptional regulator 579116 12844868 Q7C_540 Methylophaga frappieri transcriptional regulator YP_006292400.1 578838 D 754477 CDS YP_006292401.1 387129511 12844869 complement(579142..579777) 1 NC_017856.1 Conjugative transfer protein s043 579777 12844869 Q7C_541 Methylophaga frappieri Conjugative transfer protein s043 YP_006292401.1 579142 R 754477 CDS YP_006292402.1 387129512 12844870 complement(579764..580324) 1 NC_017856.1 Conjugative transfer protein 234 580324 12844870 Q7C_542 Methylophaga frappieri Conjugative transfer protein 234 YP_006292402.1 579764 R 754477 CDS YP_006292403.1 387129513 12844871 complement(580334..582154) 1 NC_017856.1 TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; IncF plasmid conjugative transfer protein TraD 582154 12844871 Q7C_543 Methylophaga frappieri IncF plasmid conjugative transfer protein TraD YP_006292403.1 580334 R 754477 CDS YP_006292404.1 387129514 12844872 complement(582203..584353) 1 NC_017856.1 PFAM: Putative helicase; Conjugative transfer protein TraI, relaxase 584353 12844872 Q7C_544 Methylophaga frappieri Conjugative transfer protein TraI, relaxase YP_006292404.1 582203 R 754477 CDS YP_006292405.1 387129515 12844873 complement(584434..585831) 1 NC_017856.1 hypothetical protein 585831 12844873 Q7C_545 Methylophaga frappieri hypothetical protein YP_006292405.1 584434 R 754477 CDS YP_006292406.1 387129516 12844874 complement(585831..590882) 1 NC_017856.1 PFAM: Protein kinase domain; Nuclease-related domain; nuclease-like protein,protein kinase family protein 590882 12844874 Q7C_546 Methylophaga frappieri nuclease-like protein,protein kinase family protein YP_006292406.1 585831 R 754477 CDS YP_006292407.1 387129517 12844875 complement(591128..594358) 1 NC_017856.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R 594358 12844875 Q7C_547 Methylophaga frappieri type I restriction-modification system, restriction subunit R YP_006292407.1 591128 R 754477 CDS YP_006292408.1 387129518 12844876 complement(594355..595650) 1 NC_017856.1 PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 595650 12844876 Q7C_548 Methylophaga frappieri type I restriction-modification system, specificity subunit S YP_006292408.1 594355 R 754477 CDS YP_006292409.1 387129519 12844877 complement(595647..595907) 1 NC_017856.1 type I restriction-modification system, DNA-methyltransferase subunit M 595907 12844877 Q7C_549 Methylophaga frappieri type I restriction-modification system, DNA-methyltransferase subunit M YP_006292409.1 595647 R 754477 CDS YP_006292410.1 387129520 12844878 complement(596096..597724) 1 NC_017856.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; DNA-methyltransferase subunit M 597724 12844878 Q7C_550 Methylophaga frappieri DNA-methyltransferase subunit M YP_006292410.1 596096 R 754477 CDS YP_006292411.1 387129521 12844879 complement(597733..598665) 1 NC_017856.1 hypothetical protein 598665 12844879 Q7C_551 Methylophaga frappieri hypothetical protein YP_006292411.1 597733 R 754477 CDS YP_006292412.1 387129522 12844880 complement(598987..599286) 1 NC_017856.1 hypothetical protein 599286 12844880 Q7C_552 Methylophaga frappieri hypothetical protein YP_006292412.1 598987 R 754477 CDS YP_006292413.1 387129523 12844881 complement(599374..600279) 1 NC_017856.1 PFAM: Exonuclease; DNA polymerase III, epsilon subunit-like protein 600279 12844881 Q7C_553 Methylophaga frappieri DNA polymerase III, epsilon subunit-like protein YP_006292413.1 599374 R 754477 CDS YP_006292414.1 387129524 12844882 600920..601369 1 NC_017856.1 PFAM: Peptidase S24-like; Error-prone repair protein UmuD 601369 12844882 Q7C_554 Methylophaga frappieri Error-prone repair protein UmuD YP_006292414.1 600920 D 754477 CDS YP_006292415.1 387129525 12844883 601338..602645 1 NC_017856.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) 602645 12844883 Q7C_555 Methylophaga frappieri Error-prone, lesion bypass DNA polymerase V (UmuC) YP_006292415.1 601338 D 754477 CDS YP_006292416.1 387129526 12844884 complement(602656..603099) 1 NC_017856.1 FIG01062327; hypothetical protein 603099 12844884 Q7C_556 Methylophaga frappieri hypothetical protein YP_006292416.1 602656 R 754477 CDS YP_006292417.1 387129527 12844885 complement(603301..603468) 1 NC_017856.1 hypothetical protein 603468 12844885 Q7C_557 Methylophaga frappieri hypothetical protein YP_006292417.1 603301 R 754477 CDS YP_006292418.1 387129528 12844886 603564..604538 1 NC_017856.1 TIGRFAM: PRTRC system protein D; Rod shape determination protein 604538 12844886 Q7C_558 Methylophaga frappieri Rod shape determination protein YP_006292418.1 603564 D 754477 CDS YP_006292419.1 387129529 12844887 604637..604810 1 NC_017856.1 FIG01202433; hypothetical protein 604810 12844887 Q7C_559 Methylophaga frappieri hypothetical protein YP_006292419.1 604637 D 754477 CDS YP_006292420.1 387129530 12844888 604812..606053 1 NC_017856.1 PFAM: Phage integrase family; integrase-like protein 606053 12844888 Q7C_560 Methylophaga frappieri integrase-like protein YP_006292420.1 604812 D 754477 CDS YP_006292421.1 387129531 12844889 complement(606743..606871) 1 NC_017856.1 hypothetical protein 606871 12844889 Q7C_561 Methylophaga frappieri hypothetical protein YP_006292421.1 606743 R 754477 CDS YP_006292422.1 387129532 12844890 complement(607020..609074) 1 NC_017856.1 PFAM: GAF domain; GGDEF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 609074 12844890 Q7C_562 Methylophaga frappieri diguanylate cyclase YP_006292422.1 607020 R 754477 CDS YP_006292423.1 387129533 12844891 complement(609224..610084) 1 NC_017856.1 PFAM: Universal stress protein family; Universal stress protein family 4 610084 12844891 Q7C_563 Methylophaga frappieri Universal stress protein family 4 YP_006292423.1 609224 R 754477 CDS YP_006292424.1 387129534 12844892 complement(610093..611583) 1 NC_017856.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease 611583 12844892 Q7C_564 Methylophaga frappieri sulfate permease YP_006292424.1 610093 R 754477 CDS YP_006292425.1 387129535 12844893 611831..613093 1 NC_017856.1 PFAM: Mechanosensitive ion channel; Small-conductance mechanosensitive channel 613093 12844893 Q7C_565 Methylophaga frappieri Small-conductance mechanosensitive channel YP_006292425.1 611831 D 754477 CDS YP_006292426.1 387129536 12844894 613232..613744 1 NC_017856.1 MarR family transcriptional regulator 613744 12844894 Q7C_566 Methylophaga frappieri MarR family transcriptional regulator YP_006292426.1 613232 D 754477 CDS YP_006292427.1 387129537 12844895 613746..614927 1 NC_017856.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; Bcr/CflA family multidrug resistance transporter 614927 12844895 Q7C_567 Methylophaga frappieri Bcr/CflA family multidrug resistance transporter YP_006292427.1 613746 D 754477 CDS YP_006292428.1 387129538 12844896 614992..616359 1 NC_017856.1 PFAM: Outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 616359 12844896 Q7C_568 Methylophaga frappieri NodT family RND efflux system outer membrane lipoprotein YP_006292428.1 614992 D 754477 CDS YP_006292429.1 387129539 12844897 616359..617528 1 NC_017856.1 TIGRFAM: RND family efflux transporter, MFP subunit; Membrane fusion protein of RND family multidrug efflux pump 617528 12844897 Q7C_569 Methylophaga frappieri Membrane fusion protein of RND family multidrug efflux pump YP_006292429.1 616359 D 754477 CDS YP_006292430.1 387129540 12844898 617521..620649 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; Acriflavin resistance protein 620649 12844898 Q7C_570 Methylophaga frappieri Acriflavin resistance protein YP_006292430.1 617521 D 754477 CDS YP_006292431.1 387129541 12844899 complement(620653..621420) 1 NC_017856.1 PFAM: Protein of unknown function (DUF815); ATP/GTP-binding protein 621420 12844899 Q7C_571 Methylophaga frappieri ATP/GTP-binding protein YP_006292431.1 620653 R 754477 CDS YP_006292432.1 387129542 12844900 complement(621508..623607) 1 NC_017856.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase 623607 12844900 Q7C_572 Methylophaga frappieri Polyribonucleotide nucleotidyltransferase YP_006292432.1 621508 R 754477 CDS YP_006292433.1 387129543 12844901 complement(623793..624062) 1 NC_017856.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 624062 12844901 Q7C_573 Methylophaga frappieri 30S ribosomal protein S15 YP_006292433.1 623793 R 754477 CDS YP_006292434.1 387129544 12844902 complement(624166..625113) 1 NC_017856.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 625113 12844902 Q7C_574 Methylophaga frappieri tRNA pseudouridine synthase B YP_006292434.1 624166 R 754477 CDS YP_006292435.1 387129545 12844903 complement(625126..625512) 1 NC_017856.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 625512 12844903 Q7C_575 Methylophaga frappieri ribosome-binding factor A YP_006292435.1 625126 R 754477 CDS YP_006292436.1 387129546 12844904 complement(625512..628277) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 628277 12844904 Q7C_576 Methylophaga frappieri translation initiation factor 2 YP_006292436.1 625512 R 754477 CDS YP_006292437.1 387129547 12844905 complement(628281..629795) 1 NC_017856.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; transcription termination protein NusA 629795 12844905 Q7C_577 Methylophaga frappieri transcription termination protein NusA YP_006292437.1 628281 R 754477 CDS YP_006292438.1 387129548 12844906 complement(629871..630317) 1 NC_017856.1 PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 630317 12844906 Q7C_578 Methylophaga frappieri hypothetical protein YP_006292438.1 629871 R 754477 CDS YP_006292439.1 387129549 12844907 complement(630820..632622) 1 NC_017856.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; Sulfite reductase (NADPH) flavoprotein alpha-component 632622 12844907 Q7C_579 Methylophaga frappieri Sulfite reductase (NADPH) flavoprotein alpha-component YP_006292439.1 630820 R 754477 CDS YP_006292440.1 387129550 12844908 complement(632712..638147) 1 NC_017856.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADPH) large subunit 638147 12844908 Q7C_580 Methylophaga frappieri glutamate synthase (NADPH) large subunit YP_006292440.1 632712 R 754477 CDS YP_006292441.1 387129551 12844910 complement(638848..640251) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I); nitrogen regulation protein NR(I) 640251 12844910 Q7C_582 Methylophaga frappieri nitrogen regulation protein NR(I) YP_006292441.1 638848 R 754477 CDS YP_006292442.1 387129552 12844911 complement(640253..641317) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; nitrogen regulation protein NR(II) 641317 12844911 Q7C_583 Methylophaga frappieri nitrogen regulation protein NR(II) YP_006292442.1 640253 R 754477 CDS YP_006292443.1 387129553 12844912 complement(641507..642103) 1 NC_017856.1 hypothetical protein 642103 12844912 Q7C_584 Methylophaga frappieri hypothetical protein YP_006292443.1 641507 R 754477 CDS YP_006292444.1 387129554 12844913 complement(642177..643586) 1 NC_017856.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase 643586 12844913 Q7C_585 Methylophaga frappieri glutamine synthetase YP_006292444.1 642177 R 754477 CDS YP_006292445.1 387129555 12844914 complement(643758..643991) 1 NC_017856.1 PFAM: SirA-like protein; SirA family protein 643991 12844914 Q7C_586 Methylophaga frappieri SirA family protein YP_006292445.1 643758 R 754477 CDS YP_006292446.1 387129556 12844915 complement(643988..645043) 1 NC_017856.1 PFAM: tRNA methyl transferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 645043 12844915 Q7C_587 Methylophaga frappieri tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_006292446.1 643988 R 754477 CDS YP_006292447.1 387129557 12844916 complement(645043..646485) 1 NC_017856.1 PFAM: Putative modulator of DNA gyrase; PMID 12029038; TldD protein, part of proposed TldE/TldD proteolytic complex 646485 12844916 Q7C_588 Methylophaga frappieri TldD protein, part of proposed TldE/TldD proteolytic complex YP_006292447.1 645043 R 754477 CDS YP_006292448.1 387129558 12844917 complement(646529..650311) 1 NC_017856.1 TIGRFAM: TIGR02099 family protein; hypothetical protein 650311 12844917 Q7C_589 Methylophaga frappieri hypothetical protein YP_006292448.1 646529 R 754477 CDS YP_006292449.1 387129559 12844918 complement(650313..651782) 1 NC_017856.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease G 651782 12844918 Q7C_590 Methylophaga frappieri ribonuclease G YP_006292449.1 650313 R 754477 CDS YP_006292450.1 387129560 12844919 complement(651775..652254) 1 NC_017856.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf 652254 12844919 Q7C_591 Methylophaga frappieri Septum formation protein Maf YP_006292450.1 651775 R 754477 CDS YP_006292451.1 387129561 12844920 complement(652362..652799) 1 NC_017856.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; LSU m3Psi1915 methyltransferase RlmH / ybeA 652799 12844920 Q7C_592 Methylophaga frappieri LSU m3Psi1915 methyltransferase RlmH / ybeA YP_006292451.1 652362 R 754477 CDS YP_006292452.1 387129562 12844921 complement(652829..653179) 1 NC_017856.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; Iojap protein 653179 12844921 Q7C_593 Methylophaga frappieri Iojap protein YP_006292452.1 652829 R 754477 CDS YP_006292453.1 387129563 12844922 complement(653211..654041) 1 NC_017856.1 PFAM: DUF218 domain; hypothetical protein 654041 12844922 Q7C_594 Methylophaga frappieri hypothetical protein YP_006292453.1 653211 R 754477 CDS YP_006292454.1 387129564 12844923 complement(654041..654703) 1 NC_017856.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase( ) 654703 12844923 Q7C_595 Methylophaga frappieri nicotinate (nicotinamide) nucleotide adenylyltransferase( ) YP_006292454.1 654041 R 754477 CDS YP_006292455.1 387129565 12844924 complement(654684..655940) 1 NC_017856.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 655940 12844924 Q7C_596 Methylophaga frappieri gamma-glutamyl phosphate reductase YP_006292455.1 654684 R 754477 CDS YP_006292456.1 387129566 12844925 complement(655966..656997) 1 NC_017856.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 656997 12844925 Q7C_597 Methylophaga frappieri DNA polymerase III subunit delta YP_006292456.1 655966 R 754477 CDS YP_006292457.1 387129567 12844926 complement(657007..657510) 1 NC_017856.1 PFAM: Rare lipoprotein B family; LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) 657510 12844926 Q7C_598 Methylophaga frappieri LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) YP_006292457.1 657007 R 754477 CDS YP_006292458.1 387129568 12844927 complement(657528..659981) 1 NC_017856.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 659981 12844927 Q7C_599 Methylophaga frappieri leucyl-tRNA synthetase YP_006292458.1 657528 R 754477 CDS YP_006292459.1 387129569 12844928 complement(660104..660490) 1 NC_017856.1 PFAM: H-NS histone family; DNA-binding protein H-NS 660490 12844928 Q7C_600 Methylophaga frappieri DNA-binding protein H-NS YP_006292459.1 660104 R 754477 CDS YP_006292460.1 387129570 12844929 complement(660557..660805) 1 NC_017856.1 4Fe-4S ferredoxin 660805 12844929 Q7C_601 Methylophaga frappieri 4Fe-4S ferredoxin YP_006292460.1 660557 R 754477 CDS YP_006292461.1 387129571 12844930 complement(660849..661340) 1 NC_017856.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; Phosphopantetheine adenylyltransferase 661340 12844930 Q7C_602 Methylophaga frappieri Phosphopantetheine adenylyltransferase YP_006292461.1 660849 R 754477 CDS YP_006292462.1 387129572 12844931 complement(661446..662267) 1 NC_017856.1 PFAM: Putative esterase; hydrolase of alpha/beta superfamily 662267 12844931 Q7C_603 Methylophaga frappieri hydrolase of alpha/beta superfamily YP_006292462.1 661446 R 754477 CDS YP_006292463.1 387129573 12844932 complement(662503..663084) 1 NC_017856.1 PFAM: hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; Ribosomal RNA small subunit methyltransferase D 663084 12844932 Q7C_604 Methylophaga frappieri Ribosomal RNA small subunit methyltransferase D YP_006292463.1 662503 R 754477 CDS YP_006292464.1 387129574 12844933 complement(663065..664372) 1 NC_017856.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Zinc protease 664372 12844933 Q7C_605 Methylophaga frappieri Zinc protease YP_006292464.1 663065 R 754477 CDS YP_006292465.1 387129575 12844934 complement(664362..665729) 1 NC_017856.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase 665729 12844934 Q7C_606 Methylophaga frappieri peptidase YP_006292465.1 664362 R 754477 CDS YP_006292466.1 387129576 12844935 665721..666842 1 NC_017856.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; Signal recognition particle receptor protein FtsY (alpha subunit) 666842 12844935 Q7C_607 Methylophaga frappieri Signal recognition particle receptor protein FtsY (alpha subunit) YP_006292466.1 665721 D 754477 CDS YP_006292467.1 387129577 12844936 666839..667495 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; TC 3.A.5.1.1; cell division transporter ATP-binding protein FtsE 667495 12844936 Q7C_608 Methylophaga frappieri cell division transporter ATP-binding protein FtsE YP_006292467.1 666839 D 754477 CDS YP_006292468.1 387129578 12844937 667495..668424 1 NC_017856.1 PFAM: Predicted permease; cell division protein FtsX 668424 12844937 Q7C_609 Methylophaga frappieri cell division protein FtsX YP_006292468.1 667495 D 754477 CDS YP_006292469.1 387129579 12844938 668530..669393 1 NC_017856.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; RNA polymerase sigma factor RpoH 669393 12844938 Q7C_610 Methylophaga frappieri RNA polymerase sigma factor RpoH YP_006292469.1 668530 D 754477 CDS YP_006292470.1 387129580 12844939 complement(669459..669782) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain; 4Fe-4S ferredoxin 669782 12844939 Q7C_611 Methylophaga frappieri 4Fe-4S ferredoxin YP_006292470.1 669459 R 754477 CDS YP_006292471.1 387129581 12844940 669924..670220 1 NC_017856.1 PFAM: Protein of unknown function (DUF1049); integral membrane protein 670220 12844940 Q7C_612 Methylophaga frappieri integral membrane protein YP_006292471.1 669924 D 754477 CDS YP_006292472.1 387129582 12844941 670224..671411 1 NC_017856.1 Heat shock protein YciM 671411 12844941 Q7C_613 Methylophaga frappieri Heat shock protein YciM YP_006292472.1 670224 D 754477 CDS YP_006292473.1 387129583 12844942 671408..671758 1 NC_017856.1 PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); Arsenate reductase 671758 12844942 Q7C_614 Methylophaga frappieri Arsenate reductase YP_006292473.1 671408 D 754477 CDS YP_006292474.1 387129584 12844943 671758..672348 1 NC_017856.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; flavoprotein WrbA 672348 12844943 Q7C_615 Methylophaga frappieri flavoprotein WrbA YP_006292474.1 671758 D 754477 CDS YP_006292475.1 387129585 12844944 672345..672719 1 NC_017856.1 PFAM: Predicted membrane protein (DUF2069); hypothetical protein 672719 12844944 Q7C_616 Methylophaga frappieri hypothetical protein YP_006292475.1 672345 D 754477 CDS YP_006292476.1 387129586 12844945 672756..672980 1 NC_017856.1 hypothetical protein 672980 12844945 Q7C_617 Methylophaga frappieri hypothetical protein YP_006292476.1 672756 D 754477 CDS YP_006292477.1 387129587 12844946 673059..673856 1 NC_017856.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--protein ligase 673856 12844946 Q7C_618 Methylophaga frappieri biotin--protein ligase YP_006292477.1 673059 D 754477 CDS YP_006292478.1 387129588 12844947 673853..674626 1 NC_017856.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Pantothenate kinase type III, CoaX-like protein 674626 12844947 Q7C_619 Methylophaga frappieri Pantothenate kinase type III, CoaX-like protein YP_006292478.1 673853 D 754477 CDS YP_006292479.1 387129589 12844949 675052..675651 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; periplasmic protein TrxB 675651 12844949 Q7C_621 Methylophaga frappieri periplasmic protein TrxB YP_006292479.1 675052 D 754477 CDS YP_006292480.1 387129590 12844950 complement(675703..679071) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; CHASE domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 679071 12844950 Q7C_622 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292480.1 675703 R 754477 CDS YP_006292481.1 387129591 12844951 679392..681104 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 681104 12844951 Q7C_623 Methylophaga frappieri DNA polymerase III subunits gamma and tau YP_006292481.1 679392 D 754477 CDS YP_006292482.1 387129592 12844952 681117..681425 1 NC_017856.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein 681425 12844952 Q7C_624 Methylophaga frappieri DNA-binding protein YP_006292482.1 681117 D 754477 CDS YP_006292483.1 387129593 12844953 681429..682028 1 NC_017856.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; Recombination protein RecR 682028 12844953 Q7C_625 Methylophaga frappieri Recombination protein RecR YP_006292483.1 681429 D 754477 CDS YP_006292484.1 387129594 12844954 682055..683239 1 NC_017856.1 PFAM: HDOD domain; signal transduction protein 683239 12844954 Q7C_626 Methylophaga frappieri signal transduction protein YP_006292484.1 682055 D 754477 CDS YP_006292485.1 387129595 12844955 683242..683955 1 NC_017856.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 683955 12844955 Q7C_627 Methylophaga frappieri leucyl/phenylalanyl-tRNA--protein transferase YP_006292485.1 683242 D 754477 CDS YP_006292486.1 387129596 12844956 684198..684665 1 NC_017856.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase 684665 12844956 Q7C_628 Methylophaga frappieri Arginine-tRNA-protein transferase YP_006292486.1 684198 D 754477 CDS YP_006292487.1 387129597 12844957 684713..684931 1 NC_017856.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 684931 12844957 Q7C_629 Methylophaga frappieri translation initiation factor 1 YP_006292487.1 684713 D 754477 CDS YP_006292488.1 387129598 12844958 complement(684928..685302) 1 NC_017856.1 PFAM: Disulfide bond formation protein DsbB; Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation 685302 12844958 Q7C_630 Methylophaga frappieri Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation YP_006292488.1 684928 R 754477 CDS YP_006292489.1 387129599 12844959 685505..686026 1 NC_017856.1 PFAM: Protein of unknown function (DUF1451); hypothetical protein 686026 12844959 Q7C_631 Methylophaga frappieri hypothetical protein YP_006292489.1 685505 D 754477 CDS YP_006292490.1 387129600 12844960 complement(686011..687186) 1 NC_017856.1 PFAM: Cupin superfamily protein; hypothetical protein 687186 12844960 Q7C_632 Methylophaga frappieri hypothetical protein YP_006292490.1 686011 R 754477 CDS YP_006292491.1 387129601 12844961 complement(687189..687629) 1 NC_017856.1 PFAM: NfeD-like; activity regulator of membrane protease YbbK 687629 12844961 Q7C_633 Methylophaga frappieri activity regulator of membrane protease YbbK YP_006292491.1 687189 R 754477 CDS YP_006292492.1 387129602 12844962 complement(687616..688554) 1 NC_017856.1 PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit YbbK 688554 12844962 Q7C_634 Methylophaga frappieri stomatin/prohibitin-family membrane protease subunit YbbK YP_006292492.1 687616 R 754477 CDS YP_006292493.1 387129603 12844963 688683..689276 1 NC_017856.1 PFAM: Protein of unknown function (DUF2803); hypothetical protein 689276 12844963 Q7C_635 Methylophaga frappieri hypothetical protein YP_006292493.1 688683 D 754477 CDS YP_006292494.1 387129604 12844964 complement(689273..690007) 1 NC_017856.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase 690007 12844964 Q7C_636 Methylophaga frappieri 5'-methylthioadenosine phosphorylase YP_006292494.1 689273 R 754477 CDS YP_006292495.1 387129605 12844965 complement(690004..690549) 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 690549 12844965 Q7C_637 Methylophaga frappieri hypoxanthine-guanine phosphoribosyltransferase YP_006292495.1 690004 R 754477 CDS YP_006292496.1 387129606 12844966 690580..691506 1 NC_017856.1 PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF 691506 12844966 Q7C_638 Methylophaga frappieri Vitamin B12 ABC transporter, B12-binding component BtuF YP_006292496.1 690580 D 754477 CDS YP_006292497.1 387129607 12844967 691496..692275 1 NC_017856.1 PFAM: ABC transporter; TC 3.A.1.14.3; Ferrichrome transport ATP-binding protein FhuC 692275 12844967 Q7C_639 Methylophaga frappieri Ferrichrome transport ATP-binding protein FhuC YP_006292497.1 691496 D 754477 CDS YP_006292498.1 387129608 12844968 692272..693252 1 NC_017856.1 PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 693252 12844968 Q7C_640 Methylophaga frappieri Fe3+-siderophore ABC transporter permease YP_006292498.1 692272 D 754477 CDS YP_006292499.1 387129609 12844969 693323..694315 1 NC_017856.1 PFAM: Rhodanese-like domain; hypothetical protein 694315 12844969 Q7C_641 Methylophaga frappieri hypothetical protein YP_006292499.1 693323 D 754477 CDS YP_006292500.1 387129610 12844970 694322..695983 1 NC_017856.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 695983 12844970 Q7C_642 Methylophaga frappieri gamma-glutamyltranspeptidase YP_006292500.1 694322 D 754477 CDS YP_006292501.1 387129611 12844971 complement(695980..696444) 1 NC_017856.1 hypothetical protein 696444 12844971 Q7C_643 Methylophaga frappieri hypothetical protein YP_006292501.1 695980 R 754477 CDS YP_006292502.1 387129612 12844972 696480..697244 1 NC_017856.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 697244 12844972 Q7C_644 Methylophaga frappieri deoxyribonuclease YP_006292502.1 696480 D 754477 CDS YP_006292503.1 387129613 12844973 697357..698268 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 698268 12844973 Q7C_645 Methylophaga frappieri MoxR-like ATPase YP_006292503.1 697357 D 754477 CDS YP_006292504.1 387129614 12844974 698268..699230 1 NC_017856.1 PFAM: Protein of unknown function DUF58; hypothetical protein 699230 12844974 Q7C_646 Methylophaga frappieri hypothetical protein YP_006292504.1 698268 D 754477 CDS YP_006292505.1 387129615 12844975 699220..701247 1 NC_017856.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase 701247 12844975 Q7C_647 Methylophaga frappieri transglutaminase YP_006292505.1 699220 D 754477 CDS YP_006292506.1 387129616 12844976 701312..702064 1 NC_017856.1 PFAM: ThiF family; HesA/MoeB/ThiF family protein 702064 12844976 Q7C_648 Methylophaga frappieri HesA/MoeB/ThiF family protein YP_006292506.1 701312 D 754477 CDS YP_006292507.1 387129617 12844977 702102..702563 1 NC_017856.1 hypothetical protein 702563 12844977 Q7C_649 Methylophaga frappieri hypothetical protein YP_006292507.1 702102 D 754477 CDS YP_006292508.1 387129618 12844978 702605..703096 1 NC_017856.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 703096 12844978 Q7C_650 Methylophaga frappieri YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_006292508.1 702605 D 754477 CDS YP_006292509.1 387129619 12844979 703296..704165 1 NC_017856.1 hypothetical protein 704165 12844979 Q7C_651 Methylophaga frappieri hypothetical protein YP_006292509.1 703296 D 754477 CDS YP_006292510.1 387129620 12844980 complement(704167..706449) 1 NC_017856.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 706449 12844980 Q7C_652 Methylophaga frappieri Potassium efflux system KefA protein / Small-conductance mechanosensitive channel YP_006292510.1 704167 R 754477 CDS YP_006292511.1 387129621 12844981 706684..707325 1 NC_017856.1 hypothetical protein 707325 12844981 Q7C_653 Methylophaga frappieri hypothetical protein YP_006292511.1 706684 D 754477 CDS YP_006292512.1 387129622 12844982 707422..707904 1 NC_017856.1 hypothetical protein 707904 12844982 Q7C_654 Methylophaga frappieri hypothetical protein YP_006292512.1 707422 D 754477 CDS YP_006292513.1 387129623 12844983 707983..709188 1 NC_017856.1 PFAM: Major Facilitator Superfamily; arabinose efflux permease family protein 709188 12844983 Q7C_655 Methylophaga frappieri arabinose efflux permease family protein YP_006292513.1 707983 D 754477 CDS YP_006292514.1 387129624 12844984 complement(709202..710245) 1 NC_017856.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein ACR3 710245 12844984 Q7C_656 Methylophaga frappieri arsenical-resistance protein ACR3 YP_006292514.1 709202 R 754477 CDS YP_006292515.1 387129625 12844985 complement(710245..710607) 1 NC_017856.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; Arsenate reductase 710607 12844985 Q7C_657 Methylophaga frappieri Arsenate reductase YP_006292515.1 710245 R 754477 CDS YP_006292516.1 387129626 12844986 complement(710689..711057) 1 NC_017856.1 Arsenical resistance operon repressor 711057 12844986 Q7C_658 Methylophaga frappieri Arsenical resistance operon repressor YP_006292516.1 710689 R 754477 CDS YP_006292517.1 387129627 12844987 711165..711803 1 NC_017856.1 PFAM: NmrA-like family; nucleoside-diphosphate sugar epimerase 711803 12844987 Q7C_659 Methylophaga frappieri nucleoside-diphosphate sugar epimerase YP_006292517.1 711165 D 754477 CDS YP_006292518.1 387129628 12844988 711913..713232 1 NC_017856.1 PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; Paraquat-inducible protein A 713232 12844988 Q7C_660 Methylophaga frappieri Paraquat-inducible protein A YP_006292518.1 711913 D 754477 CDS YP_006292519.1 387129629 12844989 713225..714913 1 NC_017856.1 PFAM: mce related protein; Paraquat-inducible protein B 714913 12844989 Q7C_661 Methylophaga frappieri Paraquat-inducible protein B YP_006292519.1 713225 D 754477 CDS YP_006292520.1 387129630 12844990 714910..715482 1 NC_017856.1 PFAM: Protein of unknown function (DUF330); lipoprotein 715482 12844990 Q7C_662 Methylophaga frappieri lipoprotein YP_006292520.1 714910 D 754477 CDS YP_006292521.1 387129631 12844991 complement(715611..716198) 1 NC_017856.1 hypothetical protein 716198 12844991 Q7C_663 Methylophaga frappieri hypothetical protein YP_006292521.1 715611 R 754477 CDS YP_006292522.1 387129632 12844992 complement(716372..717733) 1 NC_017856.1 PFAM: Aldehyde dehydrogenase family; Succinate-semialdehyde dehydrogenase (NAD), Succinate-semialdehyde dehydrogenase (NADP+) 717733 12844992 Q7C_664 Methylophaga frappieri Succinate-semialdehyde dehydrogenase (NAD), Succinate-semialdehyde dehydrogenase (NADP+) YP_006292522.1 716372 R 754477 CDS YP_006292523.1 387129633 12844993 complement(717741..718997) 1 NC_017856.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro dipeptidase 718997 12844993 Q7C_665 Methylophaga frappieri Xaa-Pro dipeptidase YP_006292523.1 717741 R 754477 CDS YP_006292524.1 387129634 12844994 complement(718994..720271) 1 NC_017856.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-pyruvate aminotransferase 720271 12844994 Q7C_666 Methylophaga frappieri Diaminobutyrate-pyruvate aminotransferase YP_006292524.1 718994 R 754477 CDS YP_006292525.1 387129635 12844995 complement(720306..721475) 1 NC_017856.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; N-acetyl-L,L-diaminopimelate deacetylase 721475 12844995 Q7C_667 Methylophaga frappieri N-acetyl-L,L-diaminopimelate deacetylase YP_006292525.1 720306 R 754477 CDS YP_006292526.1 387129636 12844996 complement(721632..722378) 1 NC_017856.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; ferredoxin--NADP(+) reductase 722378 12844996 Q7C_668 Methylophaga frappieri ferredoxin--NADP(+) reductase YP_006292526.1 721632 R 754477 CDS YP_006292527.1 387129637 12844997 722542..723183 1 NC_017856.1 hypothetical protein 723183 12844997 Q7C_669 Methylophaga frappieri hypothetical protein YP_006292527.1 722542 D 754477 CDS YP_006292528.1 387129638 12844998 723183..723548 1 NC_017856.1 PFAM: Domain of unknown function DUF; hypothetical protein 723548 12844998 Q7C_670 Methylophaga frappieri hypothetical protein YP_006292528.1 723183 D 754477 CDS YP_006292529.1 387129639 12844999 723564..723896 1 NC_017856.1 PFAM: Small Multidrug Resistance protein; Ethidium bromide-methyl viologen resistance protein EmrE 723896 12844999 Q7C_671 Methylophaga frappieri Ethidium bromide-methyl viologen resistance protein EmrE YP_006292529.1 723564 D 754477 CDS YP_006292530.1 387129640 12845000 723978..726191 1 NC_017856.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein 726191 12845000 Q7C_672 Methylophaga frappieri hypothetical protein YP_006292530.1 723978 D 754477 CDS YP_006292531.1 387129641 12845001 726231..727352 1 NC_017856.1 PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance; heat shock protein 727352 12845001 Q7C_673 Methylophaga frappieri heat shock protein YP_006292531.1 726231 D 754477 CDS YP_006292532.1 387129642 12845002 727352..727594 1 NC_017856.1 hypothetical protein 727594 12845002 Q7C_674 Methylophaga frappieri hypothetical protein YP_006292532.1 727352 D 754477 CDS YP_006292533.1 387129643 12845003 complement(727575..728513) 1 NC_017856.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Riboflavin kinase / FMN adenylyltransferase 728513 12845003 Q7C_675 Methylophaga frappieri Riboflavin kinase / FMN adenylyltransferase YP_006292533.1 727575 R 754477 CDS YP_006292534.1 387129644 12845004 728633..728878 1 NC_017856.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit 728878 12845004 Q7C_676 Methylophaga frappieri Exodeoxyribonuclease VII small subunit YP_006292534.1 728633 D 754477 CDS YP_006292535.1 387129645 12845005 728905..729765 1 NC_017856.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 729765 12845005 Q7C_677 Methylophaga frappieri polyprenyl synthetase YP_006292535.1 728905 D 754477 CDS YP_006292536.1 387129646 12845006 729771..731603 1 NC_017856.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 731603 12845006 Q7C_678 Methylophaga frappieri 1-deoxy-D-xylulose-5-phosphate synthase YP_006292536.1 729771 D 754477 CDS YP_006292537.1 387129647 12845007 731650..732030 1 NC_017856.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD 732030 12845007 Q7C_679 Methylophaga frappieri queuosine biosynthesis protein QueD YP_006292537.1 731650 D 754477 CDS YP_006292538.1 387129648 12845008 732038..732844 1 NC_017856.1 PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; GTP cyclohydrolase I type 2 732844 12845008 Q7C_680 Methylophaga frappieri GTP cyclohydrolase I type 2 YP_006292538.1 732038 D 754477 CDS YP_006292539.1 387129649 12845009 complement(732914..733522) 1 NC_017856.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 733522 12845009 Q7C_681 Methylophaga frappieri clan AA aspartic protease YP_006292539.1 732914 R 754477 CDS YP_006292540.1 387129650 12845010 733597..734718 1 NC_017856.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobA 734718 12845010 Q7C_682 Methylophaga frappieri molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_006292540.1 733597 D 754477 CDS YP_006292541.1 387129651 12845011 734711..735967 1 NC_017856.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; Molybdopterin biosynthesis protein MoeA 735967 12845011 Q7C_683 Methylophaga frappieri Molybdopterin biosynthesis protein MoeA YP_006292541.1 734711 D 754477 CDS YP_006292542.1 387129652 12845012 735967..736830 1 NC_017856.1 PFAM: PP-loop family; tRNA(Cytosine32)-2-thiocytidine synthetase 736830 12845012 Q7C_684 Methylophaga frappieri tRNA(Cytosine32)-2-thiocytidine synthetase YP_006292542.1 735967 D 754477 CDS YP_006292543.1 387129653 12845013 complement(737108..737494) 1 NC_017856.1 dioxygenase of extradiol dioxygenase family 737494 12845013 Q7C_685 Methylophaga frappieri dioxygenase of extradiol dioxygenase family YP_006292543.1 737108 R 754477 CDS YP_006292544.1 387129654 12845014 complement(737548..738390) 1 NC_017856.1 PFAM: EamA-like transporter family; permease 738390 12845014 Q7C_686 Methylophaga frappieri permease YP_006292544.1 737548 R 754477 CDS YP_006292545.1 387129655 12845015 738509..739705 1 NC_017856.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase; N-succinyl-L,L-diaminopimelate aminotransferase alternative 739705 12845015 Q7C_687 Methylophaga frappieri N-succinyl-L,L-diaminopimelate aminotransferase alternative YP_006292545.1 738509 D 754477 CDS YP_006292546.1 387129656 12845016 739721..740542 1 NC_017856.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 740542 12845016 Q7C_688 Methylophaga frappieri 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_006292546.1 739721 D 754477 CDS YP_006292547.1 387129657 12845017 740641..740985 1 NC_017856.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; glutathione-dependent thiol reductase 740985 12845017 Q7C_689 Methylophaga frappieri glutathione-dependent thiol reductase YP_006292547.1 740641 D 754477 CDS YP_006292548.1 387129658 12845018 740975..742114 1 NC_017856.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; N-succinyl-L,L-diaminopimelate desuccinylase 742114 12845018 Q7C_690 Methylophaga frappieri N-succinyl-L,L-diaminopimelate desuccinylase YP_006292548.1 740975 D 754477 CDS YP_006292549.1 387129659 12845019 742119..742415 1 NC_017856.1 hypothetical protein 742415 12845019 Q7C_691 Methylophaga frappieri hypothetical protein YP_006292549.1 742119 D 754477 CDS YP_006292550.1 387129660 12845020 742494..744719 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 744719 12845020 Q7C_692 Methylophaga frappieri TonB-dependent receptor YP_006292550.1 742494 D 754477 CDS YP_006292551.1 387129661 12845021 744973..745179 1 NC_017856.1 hypothetical protein 745179 12845021 Q7C_693 Methylophaga frappieri hypothetical protein YP_006292551.1 744973 D 754477 CDS YP_006292552.1 387129662 12845022 complement(745176..745946) 1 NC_017856.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 745946 12845022 Q7C_694 Methylophaga frappieri short-chain dehydrogenase/reductase SDR YP_006292552.1 745176 R 754477 CDS YP_006292553.1 387129663 12845023 complement(745964..746821) 1 NC_017856.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; Formyltetrahydrofolate deformylase 746821 12845023 Q7C_695 Methylophaga frappieri Formyltetrahydrofolate deformylase YP_006292553.1 745964 R 754477 CDS YP_006292554.1 387129664 12845024 complement(746872..747222) 1 NC_017856.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; pyrophosphatase 747222 12845024 Q7C_696 Methylophaga frappieri pyrophosphatase YP_006292554.1 746872 R 754477 CDS YP_006292555.1 387129665 12845025 complement(747215..747982) 1 NC_017856.1 esterase/lipase ybfF 747982 12845025 Q7C_697 Methylophaga frappieri esterase/lipase ybfF YP_006292555.1 747215 R 754477 CDS YP_006292556.1 387129666 12845026 748034..748210 1 NC_017856.1 hypothetical protein 748210 12845026 Q7C_698 Methylophaga frappieri hypothetical protein YP_006292556.1 748034 D 754477 CDS YP_006292557.1 387129667 12845027 complement(748240..749460) 1 NC_017856.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 749460 12845027 Q7C_699 Methylophaga frappieri 3-oxoacyl-ACP synthase YP_006292557.1 748240 R 754477 CDS YP_006292558.1 387129668 12845028 complement(749463..749978) 1 NC_017856.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA; 3-hydroxydecanoyl-ACP dehydratase 749978 12845028 Q7C_700 Methylophaga frappieri 3-hydroxydecanoyl-ACP dehydratase YP_006292558.1 749463 R 754477 CDS YP_006292559.1 387129669 12845029 complement(750124..751443) 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 751443 12845029 Q7C_701 Methylophaga frappieri TolC family type I secretion outer membrane protein YP_006292559.1 750124 R 754477 CDS YP_006292560.1 387129670 12845030 complement(751582..752244) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; regulatory protein LuxR 752244 12845030 Q7C_702 Methylophaga frappieri regulatory protein LuxR YP_006292560.1 751582 R 754477 CDS YP_006292561.1 387129671 12845031 complement(752248..753288) 1 NC_017856.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein 753288 12845031 Q7C_703 Methylophaga frappieri HlyD family secretion protein YP_006292561.1 752248 R 754477 CDS YP_006292562.1 387129672 12845032 complement(753584..755764) 1 NC_017856.1 PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family; ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing 755764 12845032 Q7C_704 Methylophaga frappieri ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing YP_006292562.1 753584 R 754477 CDS YP_006292563.1 387129673 12845033 complement(755757..755870) 1 NC_017856.1 hypothetical protein 755870 12845033 Q7C_705 Methylophaga frappieri hypothetical protein YP_006292563.1 755757 R 754477 CDS YP_006292564.1 387129674 12845034 755894..756232 1 NC_017856.1 hypothetical protein 756232 12845034 Q7C_706 Methylophaga frappieri hypothetical protein YP_006292564.1 755894 D 754477 CDS YP_006292565.1 387129675 12845035 complement(756234..757643) 1 NC_017856.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; GTP-binding protein EngA 757643 12845035 Q7C_707 Methylophaga frappieri GTP-binding protein EngA YP_006292565.1 756234 R 754477 CDS YP_006292566.1 387129676 12845036 complement(757644..758810) 1 NC_017856.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; Outer membrane protein YfgL 758810 12845036 Q7C_708 Methylophaga frappieri Outer membrane protein YfgL YP_006292566.1 757644 R 754477 CDS YP_006292567.1 387129677 12845037 complement(758807..759442) 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133); hypothetical protein 759442 12845037 Q7C_709 Methylophaga frappieri hypothetical protein YP_006292567.1 758807 R 754477 CDS YP_006292568.1 387129678 12845038 759716..760900 1 NC_017856.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; Ammonium transporter 760900 12845038 Q7C_710 Methylophaga frappieri Ammonium transporter YP_006292568.1 759716 D 754477 CDS YP_006292569.1 387129679 12845039 complement(760944..761714) 1 NC_017856.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 761714 12845039 Q7C_711 Methylophaga frappieri Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_006292569.1 760944 R 754477 CDS YP_006292570.1 387129680 12845040 complement(761711..762160) 1 NC_017856.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 762160 12845040 Q7C_712 Methylophaga frappieri (3R)-hydroxymyristoyl-ACP dehydratase YP_006292570.1 761711 R 754477 CDS YP_006292571.1 387129681 12845041 complement(762252..763268) 1 NC_017856.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 763268 12845041 Q7C_713 Methylophaga frappieri UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_006292571.1 762252 R 754477 CDS YP_006292572.1 387129682 12845042 complement(763275..763760) 1 NC_017856.1 PFAM: Outer membrane protein (OmpH-like); periplasmic chaperone for outer membrane proteins Skp 763760 12845042 Q7C_714 Methylophaga frappieri periplasmic chaperone for outer membrane proteins Skp YP_006292572.1 763275 R 754477 CDS YP_006292573.1 387129683 12845043 complement(763807..766083) 1 NC_017856.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; Outer membrane protein assembly factor YaeT precursor 766083 12845043 Q7C_715 Methylophaga frappieri Outer membrane protein assembly factor YaeT precursor YP_006292573.1 763807 R 754477 CDS YP_006292574.1 387129684 12845044 complement(766139..767476) 1 NC_017856.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; Membrane-associated zinc metalloprotease 767476 12845044 Q7C_716 Methylophaga frappieri Membrane-associated zinc metalloprotease YP_006292574.1 766139 R 754477 CDS YP_006292575.1 387129685 12845045 complement(767476..768651) 1 NC_017856.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 768651 12845045 Q7C_717 Methylophaga frappieri 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006292575.1 767476 R 754477 CDS YP_006292576.1 387129686 12845046 complement(768651..769478) 1 NC_017856.1 PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase 769478 12845046 Q7C_718 Methylophaga frappieri phosphatidate cytidylyltransferase YP_006292576.1 768651 R 754477 CDS YP_006292577.1 387129687 12845047 complement(769471..770214) 1 NC_017856.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl pyrophosphate synthetase 770214 12845047 Q7C_719 Methylophaga frappieri undecaprenyl pyrophosphate synthetase YP_006292577.1 769471 R 754477 CDS YP_006292578.1 387129688 12845048 complement(770237..770794) 1 NC_017856.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; Ribosome recycling factor 770794 12845048 Q7C_720 Methylophaga frappieri Ribosome recycling factor YP_006292578.1 770237 R 754477 CDS YP_006292579.1 387129689 12845049 complement(770804..771529) 1 NC_017856.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 771529 12845049 Q7C_721 Methylophaga frappieri uridylate kinase YP_006292579.1 770804 R 754477 CDS YP_006292580.1 387129690 12845050 complement(771533..772411) 1 NC_017856.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 772411 12845050 Q7C_722 Methylophaga frappieri translation elongation factor Ts YP_006292580.1 771533 R 754477 CDS YP_006292581.1 387129691 12845051 complement(772511..773263) 1 NC_017856.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 773263 12845051 Q7C_723 Methylophaga frappieri 30S ribosomal protein S2 YP_006292581.1 772511 R 754477 CDS YP_006292582.1 387129692 12845052 773538..774302 1 NC_017856.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; Methionine aminopeptidase 774302 12845052 Q7C_724 Methylophaga frappieri Methionine aminopeptidase YP_006292582.1 773538 D 754477 CDS YP_006292583.1 387129693 12845053 774319..776955 1 NC_017856.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; (Protein-PII) uridylyltransferase 776955 12845053 Q7C_725 Methylophaga frappieri (Protein-PII) uridylyltransferase YP_006292583.1 774319 D 754477 CDS YP_006292584.1 387129694 12845054 complement(777011..777277) 1 NC_017856.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; competence protein 777277 12845054 Q7C_726 Methylophaga frappieri competence protein YP_006292584.1 777011 R 754477 CDS YP_006292585.1 387129695 12845055 complement(777422..777985) 1 NC_017856.1 PFAM: Bacterial sugar transferase; Lipid carrier : UDP-N-acetylgalactosaminyltransferase 777985 12845055 Q7C_727 Methylophaga frappieri Lipid carrier : UDP-N-acetylgalactosaminyltransferase YP_006292585.1 777422 R 754477 CDS YP_006292586.1 387129696 12845056 complement(777992..778957) 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 778957 12845056 Q7C_728 Methylophaga frappieri UDP-glucose 4-epimerase YP_006292586.1 777992 R 754477 CDS YP_006292587.1 387129697 12845057 complement(778954..780348) 1 NC_017856.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 780348 12845057 Q7C_729 Methylophaga frappieri phosphomannomutase YP_006292587.1 778954 R 754477 CDS YP_006292588.1 387129698 12845058 780314..780514 1 NC_017856.1 hypothetical protein 780514 12845058 Q7C_730 Methylophaga frappieri hypothetical protein YP_006292588.1 780314 D 754477 CDS YP_006292589.1 387129699 12845059 complement(780526..781311) 1 NC_017856.1 PFAM: Glycosyl transferase family 2; N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase 781311 12845059 Q7C_731 Methylophaga frappieri N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase YP_006292589.1 780526 R 754477 CDS YP_006292590.1 387129700 12845060 complement(781329..782183) 1 NC_017856.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 782183 12845060 Q7C_732 Methylophaga frappieri glycosyl transferase family protein YP_006292590.1 781329 R 754477 CDS YP_006292591.1 387129701 12845061 complement(782606..783385) 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; NAD dependent epimerase/dehydratase family protein 783385 12845061 Q7C_733 Methylophaga frappieri NAD dependent epimerase/dehydratase family protein YP_006292591.1 782606 R 754477 CDS YP_006292592.1 387129702 12845062 complement(783382..784440) 1 NC_017856.1 PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase); 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) 784440 12845062 Q7C_734 Methylophaga frappieri 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) YP_006292592.1 783382 R 754477 CDS YP_006292593.1 387129703 12845063 complement(784496..785215) 1 NC_017856.1 glycosyltransferase 785215 12845063 Q7C_735 Methylophaga frappieri glycosyltransferase YP_006292593.1 784496 R 754477 CDS YP_006292594.1 387129704 12845064 complement(785212..785499) 1 NC_017856.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 785499 12845064 Q7C_736 Methylophaga frappieri glycosyltransferase YP_006292594.1 785212 R 754477 CDS YP_006292595.1 387129705 12845065 complement(785499..786992) 1 NC_017856.1 PFAM: Polysaccharide biosynthesis protein; capsular polysaccharide repeat unit transporter 786992 12845065 Q7C_737 Methylophaga frappieri capsular polysaccharide repeat unit transporter YP_006292595.1 785499 R 754477 CDS YP_006292596.1 387129706 12845066 complement(786955..787344) 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 787344 12845066 Q7C_738 Methylophaga frappieri acetyltransferase YP_006292596.1 786955 R 754477 CDS YP_006292597.1 387129707 12845067 complement(787401..788045) 1 NC_017856.1 PFAM: WbqC-like protein family; WbqC-like protein 788045 12845067 Q7C_739 Methylophaga frappieri WbqC-like protein YP_006292597.1 787401 R 754477 CDS YP_006292598.1 387129708 12845068 complement(788105..789439) 1 NC_017856.1 PFAM: Polysaccharide pyruvyl transferase; hypothetical protein 789439 12845068 Q7C_740 Methylophaga frappieri hypothetical protein YP_006292598.1 788105 R 754477 CDS YP_006292599.1 387129709 12845069 complement(789426..790520) 1 NC_017856.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; DegT/DnrJ/EryC1/StrS aminotransferase 790520 12845069 Q7C_741 Methylophaga frappieri DegT/DnrJ/EryC1/StrS aminotransferase YP_006292599.1 789426 R 754477 CDS YP_006292600.1 387129710 12845070 complement(790591..790974) 1 NC_017856.1 PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family; MarR family transcriptional regulator 790974 12845070 Q7C_742 Methylophaga frappieri MarR family transcriptional regulator YP_006292600.1 790591 R 754477 CDS YP_006292601.1 387129711 12845071 complement(791285..792451) 1 NC_017856.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; UDP-glucose dehydrogenase 792451 12845071 Q7C_743 Methylophaga frappieri UDP-glucose dehydrogenase YP_006292601.1 791285 R 754477 CDS YP_006292602.1 387129712 12843082 complement(792503..794404) 1 NC_017856.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 794404 12843082 Q7C_744 Methylophaga frappieri glucosamine--fructose-6-phosphate aminotransferase YP_006292602.1 792503 R 754477 CDS YP_006292603.1 387129713 12843083 complement(794439..796394) 1 NC_017856.1 PFAM: Polysaccharide biosynthesis protein; UDP-N-acetylglucosamine 4,6-dehydratase 796394 12843083 Q7C_745 Methylophaga frappieri UDP-N-acetylglucosamine 4,6-dehydratase YP_006292603.1 794439 R 754477 CDS YP_006292604.1 387129714 12843084 complement(796468..797328) 1 NC_017856.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 797328 12843084 Q7C_746 Methylophaga frappieri dTDP-4-dehydrorhamnose reductase YP_006292604.1 796468 R 754477 CDS YP_006292605.1 387129715 12843085 complement(797329..797874) 1 NC_017856.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 797874 12843085 Q7C_747 Methylophaga frappieri dTDP-4-dehydrorhamnose 3,5-epimerase YP_006292605.1 797329 R 754477 CDS YP_006292606.1 387129716 12843086 complement(797874..798758) 1 NC_017856.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 798758 12843086 Q7C_748 Methylophaga frappieri glucose-1-phosphate thymidylyltransferase YP_006292606.1 797874 R 754477 CDS YP_006292607.1 387129717 12843087 complement(798755..799828) 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 799828 12843087 Q7C_749 Methylophaga frappieri dTDP-glucose 4,6-dehydratase YP_006292607.1 798755 R 754477 CDS YP_006292608.1 387129718 12843088 799833..799967 1 NC_017856.1 hypothetical protein 799967 12843088 Q7C_750 Methylophaga frappieri hypothetical protein YP_006292608.1 799833 D 754477 CDS YP_006292609.1 387129719 12843089 800100..801155 1 NC_017856.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Alcohol dehydrogenase 801155 12843089 Q7C_751 Methylophaga frappieri Alcohol dehydrogenase YP_006292609.1 800100 D 754477 CDS YP_006292610.1 387129720 12843090 complement(801176..802087) 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 802087 12843090 Q7C_752 Methylophaga frappieri LysR family transcriptional regulator YP_006292610.1 801176 R 754477 CDS YP_006292611.1 387129721 12843091 802165..803373 1 NC_017856.1 PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 803373 12843091 Q7C_753 Methylophaga frappieri major facilitator superfamily protein YP_006292611.1 802165 D 754477 CDS YP_006292612.1 387129722 12843092 803452..804621 1 NC_017856.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 804621 12843092 Q7C_754 Methylophaga frappieri RND family efflux transporter MFP subunit YP_006292612.1 803452 D 754477 CDS YP_006292613.1 387129723 12843093 804634..807804 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 807804 12843093 Q7C_755 Methylophaga frappieri RND efflux system, inner membrane transporter CmeB YP_006292613.1 804634 D 754477 CDS YP_006292614.1 387129724 12843094 807805..809229 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; outer membrane protein OprN 809229 12843094 Q7C_756 Methylophaga frappieri outer membrane protein OprN YP_006292614.1 807805 D 754477 CDS YP_006292615.1 387129725 12843095 809424..810359 1 NC_017856.1 PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 810359 12843095 Q7C_757 Methylophaga frappieri AraC family transcriptional regulator YP_006292615.1 809424 D 754477 CDS YP_006292616.1 387129726 12843096 complement(810328..811464) 1 NC_017856.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; metal chaperone 811464 12843096 Q7C_758 Methylophaga frappieri metal chaperone YP_006292616.1 810328 R 754477 CDS YP_006292617.1 387129727 12843097 complement(811568..813226) 1 NC_017856.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; Formylmethanofuran dehydrogenase subunit A 813226 12843097 Q7C_759 Methylophaga frappieri Formylmethanofuran dehydrogenase subunit A YP_006292617.1 811568 R 754477 CDS YP_006292618.1 387129728 12843098 complement(813344..813802) 1 NC_017856.1 PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR 813802 12843098 Q7C_760 Methylophaga frappieri Zinc uptake regulation protein ZUR YP_006292618.1 813344 R 754477 CDS YP_006292619.1 387129729 12843099 813922..814374 1 NC_017856.1 PFAM: Fe-S metabolism associated domain; Sulfur acceptor protein SufE for iron-sulfur cluster assembly 814374 12843099 Q7C_761 Methylophaga frappieri Sulfur acceptor protein SufE for iron-sulfur cluster assembly YP_006292619.1 813922 D 754477 CDS YP_006292620.1 387129730 12843100 814371..815495 1 NC_017856.1 thioredoxin reductase 815495 12843100 Q7C_762 Methylophaga frappieri thioredoxin reductase YP_006292620.1 814371 D 754477 CDS YP_006292621.1 387129731 12843101 815489..816487 1 NC_017856.1 PFAM: Sodium Bile acid symporter family; cysteinyl-tRNA synthetase 816487 12843101 Q7C_763 Methylophaga frappieri cysteinyl-tRNA synthetase YP_006292621.1 815489 D 754477 CDS YP_006292622.1 387129732 12843102 816611..818626 1 NC_017856.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Threonyl-tRNA synthetase 818626 12843102 Q7C_764 Methylophaga frappieri Threonyl-tRNA synthetase YP_006292622.1 816611 D 754477 CDS YP_006292623.1 387129733 12843103 818619..819971 1 NC_017856.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; Dihydroorotase 819971 12843103 Q7C_765 Methylophaga frappieri Dihydroorotase YP_006292623.1 818619 D 754477 CDS YP_006292624.1 387129734 12843104 819990..820478 1 NC_017856.1 PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 820478 12843104 Q7C_766 Methylophaga frappieri phosphoribosyl-AMP cyclohydrolase YP_006292624.1 819990 D 754477 CDS YP_006292625.1 387129735 12843105 complement(820481..823540) 1 NC_017856.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; lactate dehydrogenase-like protein 823540 12843105 Q7C_767 Methylophaga frappieri lactate dehydrogenase-like protein YP_006292625.1 820481 R 754477 CDS YP_006292626.1 387129736 12843106 complement(823715..824926) 1 NC_017856.1 PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; metal chaperone 824926 12843106 Q7C_768 Methylophaga frappieri metal chaperone YP_006292626.1 823715 R 754477 CDS YP_006292627.1 387129737 12843107 complement(824916..825314) 1 NC_017856.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein, DksA/TraR family 825314 12843107 Q7C_769 Methylophaga frappieri C4-type zinc finger protein, DksA/TraR family YP_006292627.1 824916 R 754477 CDS YP_006292628.1 387129738 12843108 complement(825873..827939) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 827939 12843108 Q7C_770 Methylophaga frappieri TonB-dependent siderophore receptor YP_006292628.1 825873 R 754477 CDS YP_006292629.1 387129739 12843109 828264..829250 1 NC_017856.1 PFAM: Flavin containing amine oxidoreductase; putative deoxyribodipyrimidine photolyase 829250 12843109 Q7C_771 Methylophaga frappieri putative deoxyribodipyrimidine photolyase YP_006292629.1 828264 D 754477 CDS YP_006292630.1 387129740 12843110 829448..830863 1 NC_017856.1 PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 830863 12843110 Q7C_772 Methylophaga frappieri Aldehyde dehydrogenase YP_006292630.1 829448 D 754477 CDS YP_006292631.1 387129741 12843113 831257..832114 1 NC_017856.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase 832114 12843113 Q7C_775 Methylophaga frappieri Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase YP_006292631.1 831257 D 754477 CDS YP_006292632.1 387129742 12843114 complement(832184..833578) 1 NC_017856.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 833578 12843114 Q7C_776 Methylophaga frappieri cysteinyl-tRNA synthetase YP_006292632.1 832184 R 754477 CDS YP_006292633.1 387129743 12843115 complement(833578..835251) 1 NC_017856.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 835251 12843115 Q7C_777 Methylophaga frappieri glutaminyl-tRNA synthetase YP_006292633.1 833578 R 754477 CDS YP_006292634.1 387129744 12843116 835373..835993 1 NC_017856.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; Peptidyl-prolyl cis-trans isomerase ppiB 835993 12843116 Q7C_778 Methylophaga frappieri Peptidyl-prolyl cis-trans isomerase ppiB YP_006292634.1 835373 D 754477 CDS YP_006292635.1 387129745 12843117 836036..836791 1 NC_017856.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 836791 12843117 Q7C_779 Methylophaga frappieri UDP-2,3-diacylglucosamine hydrolase YP_006292635.1 836036 D 754477 CDS YP_006292636.1 387129746 12843118 complement(836775..837503) 1 NC_017856.1 PFAM: Disulfide bond isomerase protein N-terminus; Thiol:disulfide interchange protein DsbC 837503 12843118 Q7C_780 Methylophaga frappieri Thiol:disulfide interchange protein DsbC YP_006292636.1 836775 R 754477 CDS YP_006292637.1 387129747 12843119 complement(837512..837997) 1 NC_017856.1 PFAM: Protein of unknown function (DUF520); hypothetical protein 837997 12843119 Q7C_781 Methylophaga frappieri hypothetical protein YP_006292637.1 837512 R 754477 CDS YP_006292638.1 387129748 12843120 complement(838047..838964) 1 NC_017856.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; site-specific recombinase XerD 838964 12843120 Q7C_782 Methylophaga frappieri site-specific recombinase XerD YP_006292638.1 838047 R 754477 CDS YP_006292639.1 387129749 12843121 complement(839039..839383) 1 NC_017856.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 839383 12843121 Q7C_783 Methylophaga frappieri 50S ribosomal protein L19 YP_006292639.1 839039 R 754477 CDS YP_006292640.1 387129750 12843122 complement(839402..840145) 1 NC_017856.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N1) -methyltransferase 840145 12843122 Q7C_784 Methylophaga frappieri tRNA (Guanine37-N1) -methyltransferase YP_006292640.1 839402 R 754477 CDS YP_006292641.1 387129751 12843123 complement(840155..840676) 1 NC_017856.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 840676 12843123 Q7C_785 Methylophaga frappieri 16S rRNA processing protein RimM YP_006292641.1 840155 R 754477 CDS YP_006292642.1 387129752 12843124 complement(840701..840937) 1 NC_017856.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 840937 12843124 Q7C_786 Methylophaga frappieri 30S ribosomal protein S16 YP_006292642.1 840701 R 754477 CDS YP_006292643.1 387129753 12843125 complement(841039..842409) 1 NC_017856.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; TC 3.A.5.1.1; Signal recognition particle subunit Ffh SRP54 842409 12843125 Q7C_787 Methylophaga frappieri Signal recognition particle subunit Ffh SRP54 YP_006292643.1 841039 R 754477 CDS YP_006292644.1 387129754 12843126 842537..843340 1 NC_017856.1 PFAM: Cytochrome C assembly protein; CcsA-like protein 843340 12843126 Q7C_788 Methylophaga frappieri CcsA-like protein YP_006292644.1 842537 D 754477 CDS YP_006292645.1 387129755 12843127 843343..844638 1 NC_017856.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; Hemolysin 844638 12843127 Q7C_789 Methylophaga frappieri Hemolysin YP_006292645.1 843343 D 754477 CDS YP_006292646.1 387129756 12843128 844641..846521 1 NC_017856.1 hypothetical protein 846521 12843128 Q7C_790 Methylophaga frappieri hypothetical protein YP_006292646.1 844641 D 754477 CDS YP_006292647.1 387129757 12843129 846583..849069 1 NC_017856.1 PFAM: AsmA family; A/G-specific adenine glycosylase 849069 12843129 Q7C_791 Methylophaga frappieri A/G-specific adenine glycosylase YP_006292647.1 846583 D 754477 CDS YP_006292648.1 387129758 12843130 849117..850160 1 NC_017856.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 850160 12843130 Q7C_792 Methylophaga frappieri A/G-specific adenine glycosylase YP_006292648.1 849117 D 754477 CDS YP_006292649.1 387129759 12843131 850157..850423 1 NC_017856.1 PFAM: Bacterial Fe(2+) trafficking; hypothetical protein 850423 12843131 Q7C_793 Methylophaga frappieri hypothetical protein YP_006292649.1 850157 D 754477 CDS YP_006292650.1 387129760 12843132 850502..850699 1 NC_017856.1 hypothetical protein 850699 12843132 Q7C_794 Methylophaga frappieri hypothetical protein YP_006292650.1 850502 D 754477 CDS YP_006292651.1 387129761 12843133 850739..850948 1 NC_017856.1 PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein CspE 850948 12843133 Q7C_795 Methylophaga frappieri Cold shock protein CspE YP_006292651.1 850739 D 754477 CDS YP_006292652.1 387129762 12843134 851080..851826 1 NC_017856.1 hypothetical protein 851826 12843134 Q7C_796 Methylophaga frappieri hypothetical protein YP_006292652.1 851080 D 754477 CDS YP_006292653.1 387129763 12843135 851992..852660 1 NC_017856.1 hypothetical protein 852660 12843135 Q7C_797 Methylophaga frappieri hypothetical protein YP_006292653.1 851992 D 754477 CDS YP_006292654.1 387129764 12843136 complement(852727..854643) 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 854643 12843136 Q7C_798 Methylophaga frappieri ABC transporter ATP-binding protein YP_006292654.1 852727 R 754477 CDS YP_006292655.1 387129765 12843137 complement(854643..856529) 1 NC_017856.1 PFAM: ABC transporter; glutathione-regulated potassium-efflux system ATP-binding protein 856529 12843137 Q7C_799 Methylophaga frappieri glutathione-regulated potassium-efflux system ATP-binding protein YP_006292655.1 854643 R 754477 CDS YP_006292656.1 387129766 12843138 complement(856573..857259) 1 NC_017856.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 857259 12843138 Q7C_800 Methylophaga frappieri uracil-DNA glycosylase YP_006292656.1 856573 R 754477 CDS YP_006292657.1 387129767 12843139 857457..857852 1 NC_017856.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; Peptide methionine sulfoxide reductase MsrB 857852 12843139 Q7C_801 Methylophaga frappieri Peptide methionine sulfoxide reductase MsrB YP_006292657.1 857457 D 754477 CDS YP_006292658.1 387129768 12843140 857839..858108 1 NC_017856.1 PFAM: GIY-YIG catalytic domain; excinuclease ABC subunit C 858108 12843140 Q7C_802 Methylophaga frappieri excinuclease ABC subunit C YP_006292658.1 857839 D 754477 CDS YP_006292659.1 387129769 12843141 complement(858254..858583) 1 NC_017856.1 PFAM: Mor transcription activator family; Mor transcription activator-like protein 858583 12843141 Q7C_803 Methylophaga frappieri Mor transcription activator-like protein YP_006292659.1 858254 R 754477 CDS YP_006292660.1 387129770 12843142 complement(858624..859289) 1 NC_017856.1 hypothetical protein 859289 12843142 Q7C_804 Methylophaga frappieri hypothetical protein YP_006292660.1 858624 R 754477 CDS YP_006292661.1 387129771 12843143 complement(859327..859929) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1018); E16-like protein 859929 12843143 Q7C_805 Methylophaga frappieri E16-like protein YP_006292661.1 859327 R 754477 CDS YP_006292662.1 387129772 12843144 complement(859926..860618) 1 NC_017856.1 hypothetical protein 860618 12843144 Q7C_806 Methylophaga frappieri hypothetical protein YP_006292662.1 859926 R 754477 CDS YP_006292663.1 387129773 12843145 complement(860803..860922) 1 NC_017856.1 hypothetical protein 860922 12843145 Q7C_807 Methylophaga frappieri hypothetical protein YP_006292663.1 860803 R 754477 CDS YP_006292664.1 387129774 12843146 complement(860909..861610) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2786); hypothetical protein 861610 12843146 Q7C_808 Methylophaga frappieri hypothetical protein YP_006292664.1 860909 R 754477 CDS YP_006292665.1 387129775 12843147 complement(861613..861783) 1 NC_017856.1 hypothetical protein 861783 12843147 Q7C_809 Methylophaga frappieri hypothetical protein YP_006292665.1 861613 R 754477 CDS YP_006292666.1 387129776 12843148 complement(861798..862433) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3164); Zn-dependent peptidase, insulinase 862433 12843148 Q7C_810 Methylophaga frappieri Zn-dependent peptidase, insulinase YP_006292666.1 861798 R 754477 CDS YP_006292667.1 387129777 12843149 complement(862462..862722) 1 NC_017856.1 hypothetical protein 862722 12843149 Q7C_811 Methylophaga frappieri hypothetical protein YP_006292667.1 862462 R 754477 CDS YP_006292668.1 387129778 12843150 complement(862733..863338) 1 NC_017856.1 hypothetical protein 863338 12843150 Q7C_812 Methylophaga frappieri hypothetical protein YP_006292668.1 862733 R 754477 CDS YP_006292669.1 387129779 12843151 complement(863338..863529) 1 NC_017856.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator 863529 12843151 Q7C_813 Methylophaga frappieri Carbon storage regulator YP_006292669.1 863338 R 754477 CDS YP_006292670.1 387129780 12843152 complement(863532..864689) 1 NC_017856.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; Eha 864689 12843152 Q7C_814 Methylophaga frappieri Eha YP_006292670.1 863532 R 754477 CDS YP_006292671.1 387129781 12843153 complement(864689..866452) 1 NC_017856.1 PFAM: Integrase core domain; Phage transposase 866452 12843153 Q7C_815 Methylophaga frappieri Phage transposase YP_006292671.1 864689 R 754477 CDS YP_006292672.1 387129782 12843154 complement(866449..867354) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3102); Phage protein 867354 12843154 Q7C_816 Methylophaga frappieri Phage protein YP_006292672.1 866449 R 754477 CDS YP_006292673.1 387129783 12843155 complement(867366..867665) 1 NC_017856.1 PFAM: IclR helix-turn-helix domain; IclR family transcriptional regulator 867665 12843155 Q7C_817 Methylophaga frappieri IclR family transcriptional regulator YP_006292673.1 867366 R 754477 CDS YP_006292674.1 387129784 12843156 complement(867662..867871) 1 NC_017856.1 hypothetical protein 867871 12843156 Q7C_818 Methylophaga frappieri hypothetical protein YP_006292674.1 867662 R 754477 CDS YP_006292675.1 387129785 12843157 complement(867909..868109) 1 NC_017856.1 TIGRFAM: phage-associated protein, BcepMu gp16 family; phage-like DNA-binding protein 868109 12843157 Q7C_819 Methylophaga frappieri phage-like DNA-binding protein YP_006292675.1 867909 R 754477 CDS YP_006292676.1 387129786 12843158 868187..868681 1 NC_017856.1 hypothetical protein 868681 12843158 Q7C_820 Methylophaga frappieri hypothetical protein YP_006292676.1 868187 D 754477 CDS YP_006292677.1 387129787 12843159 868694..869149 1 NC_017856.1 hypothetical protein 869149 12843159 Q7C_821 Methylophaga frappieri hypothetical protein YP_006292677.1 868694 D 754477 CDS YP_006292678.1 387129788 12843160 869184..869615 1 NC_017856.1 PFAM: Staphylococcal nuclease homologue; nuclease-like protein 869615 12843160 Q7C_822 Methylophaga frappieri nuclease-like protein YP_006292678.1 869184 D 754477 CDS YP_006292679.1 387129789 12843161 869746..870078 1 NC_017856.1 phage-like membrane protein 870078 12843161 Q7C_823 Methylophaga frappieri phage-like membrane protein YP_006292679.1 869746 D 754477 CDS YP_006292680.1 387129790 12843162 870081..870809 1 NC_017856.1 PFAM: Transglycosylase SLT domain; transglycosylase 870809 12843162 Q7C_824 Methylophaga frappieri transglycosylase YP_006292680.1 870081 D 754477 CDS YP_006292681.1 387129791 12843163 870800..871231 1 NC_017856.1 hypothetical protein 871231 12843163 Q7C_825 Methylophaga frappieri hypothetical protein YP_006292681.1 870800 D 754477 CDS YP_006292682.1 387129792 12843164 871194..871340 1 NC_017856.1 hypothetical protein 871340 12843164 Q7C_826 Methylophaga frappieri hypothetical protein YP_006292682.1 871194 D 754477 CDS YP_006292683.1 387129793 12843165 871337..871717 1 NC_017856.1 phage-like exported protein 871717 12843165 Q7C_827 Methylophaga frappieri phage-like exported protein YP_006292683.1 871337 D 754477 CDS YP_006292684.1 387129794 12843166 871816..872127 1 NC_017856.1 hypothetical protein 872127 12843166 Q7C_828 Methylophaga frappieri hypothetical protein YP_006292684.1 871816 D 754477 CDS YP_006292685.1 387129795 12843167 872130..872663 1 NC_017856.1 PFAM: Protein of unknown function (DUF3486); Phage terminase, small subunit 872663 12843167 Q7C_829 Methylophaga frappieri Phage terminase, small subunit YP_006292685.1 872130 D 754477 CDS YP_006292686.1 387129796 12843168 872663..874321 1 NC_017856.1 Phage terminase, large subunit 874321 12843168 Q7C_830 Methylophaga frappieri Phage terminase, large subunit YP_006292686.1 872663 D 754477 CDS YP_006292687.1 387129797 12843169 874315..875943 1 NC_017856.1 PFAM: Protein of unknown function (DUF935); Mu-like prophage protein gp29 875943 12843169 Q7C_831 Methylophaga frappieri Mu-like prophage protein gp29 YP_006292687.1 874315 D 754477 CDS YP_006292688.1 387129798 12843170 875930..877171 1 NC_017856.1 PFAM: Phage Mu protein F like protein; Phage (Mu-like) virion morphogenesis protein 877171 12843170 Q7C_832 Methylophaga frappieri Phage (Mu-like) virion morphogenesis protein YP_006292688.1 875930 D 754477 CDS YP_006292689.1 387129799 12843171 complement(877670..877822) 1 NC_017856.1 hypothetical protein 877822 12843171 Q7C_833 Methylophaga frappieri hypothetical protein YP_006292689.1 877670 R 754477 CDS YP_006292690.1 387129800 12843172 877882..878961 1 NC_017856.1 PFAM: Mu-like prophage I protein; Mu-like prophage I protein 878961 12843172 Q7C_834 Methylophaga frappieri Mu-like prophage I protein YP_006292690.1 877882 D 754477 CDS YP_006292691.1 387129801 12843173 878986..879405 1 NC_017856.1 orf34 879405 12843173 Q7C_835 Methylophaga frappieri orf34 YP_006292691.1 878986 D 754477 CDS YP_006292692.1 387129802 12843174 879434..880336 1 NC_017856.1 PFAM: Mu-like prophage major head subunit gpT; Phage major capsid protein 880336 12843174 Q7C_836 Methylophaga frappieri Phage major capsid protein YP_006292692.1 879434 D 754477 CDS YP_006292693.1 387129803 12843175 880421..880963 1 NC_017856.1 hypothetical protein 880963 12843175 Q7C_837 Methylophaga frappieri hypothetical protein YP_006292693.1 880421 D 754477 CDS YP_006292694.1 387129804 12843176 880985..881488 1 NC_017856.1 PFAM: Protein of unknown function (DUF1320); Mu-like prophage protein gp36 881488 12843176 Q7C_838 Methylophaga frappieri Mu-like prophage protein gp36 YP_006292694.1 880985 D 754477 CDS YP_006292695.1 387129805 12843177 881488..881937 1 NC_017856.1 hypothetical protein 881937 12843177 Q7C_839 Methylophaga frappieri hypothetical protein YP_006292695.1 881488 D 754477 CDS YP_006292696.1 387129806 12843178 881940..882119 1 NC_017856.1 hypothetical protein 882119 12843178 Q7C_840 Methylophaga frappieri hypothetical protein YP_006292696.1 881940 D 754477 CDS YP_006292697.1 387129807 12843179 882131..882889 1 NC_017856.1 hypothetical protein 882889 12843179 Q7C_841 Methylophaga frappieri hypothetical protein YP_006292697.1 882131 D 754477 CDS YP_006292698.1 387129808 12843180 882889..883389 1 NC_017856.1 hypothetical protein 883389 12843180 Q7C_842 Methylophaga frappieri hypothetical protein YP_006292698.1 882889 D 754477 CDS YP_006292699.1 387129809 12843181 883658..883849 1 NC_017856.1 PFAM: Mu-like prophage protein Com; Mu-like prophage protein Com 883849 12843181 Q7C_843 Methylophaga frappieri Mu-like prophage protein Com YP_006292699.1 883658 D 754477 CDS YP_006292700.1 387129810 12843182 883815..884576 1 NC_017856.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); Methyl-directed repair DNA adenine methylase 884576 12843182 Q7C_844 Methylophaga frappieri Methyl-directed repair DNA adenine methylase YP_006292700.1 883815 D 754477 CDS YP_006292701.1 387129811 12843183 884730..887510 1 NC_017856.1 PFAM: Prophage tail length tape measure protein; Phage tail length tape-measure protein 1 887510 12843183 Q7C_845 Methylophaga frappieri Phage tail length tape-measure protein 1 YP_006292701.1 884730 D 754477 CDS YP_006292702.1 387129812 12843184 887510..888721 1 NC_017856.1 hypothetical protein 888721 12843184 Q7C_846 Methylophaga frappieri hypothetical protein YP_006292702.1 887510 D 754477 CDS YP_006292703.1 387129813 12843185 888718..889539 1 NC_017856.1 PFAM: Phage hypothetical protein BR0599; TIGRFAM: phage hypothetical protein BR0599; hypothetical protein 889539 12843185 Q7C_847 Methylophaga frappieri hypothetical protein YP_006292703.1 888718 D 754477 CDS YP_006292704.1 387129814 12843186 889964..892861 1 NC_017856.1 hypothetical protein 892861 12843186 Q7C_848 Methylophaga frappieri hypothetical protein YP_006292704.1 889964 D 754477 CDS YP_006292705.1 387129815 12843187 892858..893610 1 NC_017856.1 hypothetical protein 893610 12843187 Q7C_849 Methylophaga frappieri hypothetical protein YP_006292705.1 892858 D 754477 CDS YP_006292706.1 387129816 12843188 893607..894317 1 NC_017856.1 hypothetical protein 894317 12843188 Q7C_850 Methylophaga frappieri hypothetical protein YP_006292706.1 893607 D 754477 CDS YP_006292707.1 387129817 12843189 894645..896240 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein uup 896240 12843189 Q7C_851 Methylophaga frappieri ABC transporter ATP-binding protein uup YP_006292707.1 894645 D 754477 CDS YP_006292708.1 387129818 12843190 complement(896314..896523) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1458); Dodecin Flavin-binding protein 896523 12843190 Q7C_852 Methylophaga frappieri Dodecin Flavin-binding protein YP_006292708.1 896314 R 754477 CDS YP_006292709.1 387129819 12843191 896793..898592 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; cold-shock DEAD-box protein A 898592 12843191 Q7C_853 Methylophaga frappieri cold-shock DEAD-box protein A YP_006292709.1 896793 D 754477 CDS YP_006292710.1 387129820 12843192 898651..899880 1 NC_017856.1 PFAM: Nucleoside recognition; Fused spore maturation proteins A and B 899880 12843192 Q7C_854 Methylophaga frappieri Fused spore maturation proteins A and B YP_006292710.1 898651 D 754477 CDS YP_006292711.1 387129821 12843193 900007..900648 1 NC_017856.1 PFAM: 2OG-Fe(II) oxygenase superfamily; SM-20-like protein 900648 12843193 Q7C_855 Methylophaga frappieri SM-20-like protein YP_006292711.1 900007 D 754477 CDS YP_006292712.1 387129822 12843194 900649..901185 1 NC_017856.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; Peptide deformylase 901185 12843194 Q7C_856 Methylophaga frappieri Peptide deformylase YP_006292712.1 900649 D 754477 CDS YP_006292713.1 387129823 12843195 complement(901194..902252) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3549); hypothetical protein 902252 12843195 Q7C_857 Methylophaga frappieri hypothetical protein YP_006292713.1 901194 R 754477 CDS YP_006292714.1 387129824 12843196 complement(902261..903487) 1 NC_017856.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase / N-acetylglutamate synthase 903487 12843196 Q7C_858 Methylophaga frappieri glutamate N-acetyltransferase / N-acetylglutamate synthase YP_006292714.1 902261 R 754477 CDS YP_006292715.1 387129825 12843197 complement(903487..906213) 1 NC_017856.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; TC 3.A.5.1.1; protein export cytoplasm protein SecA ATPase RNA helicase 906213 12843197 Q7C_859 Methylophaga frappieri protein export cytoplasm protein SecA ATPase RNA helicase YP_006292715.1 903487 R 754477 CDS YP_006292716.1 387129826 12843198 complement(906348..907040) 1 NC_017856.1 PFAM: Peptidase family M23; peptidase, M23/M37 family protein 907040 12843198 Q7C_860 Methylophaga frappieri peptidase, M23/M37 family protein YP_006292716.1 906348 R 754477 CDS YP_006292717.1 387129827 12843199 907283..907732 1 NC_017856.1 PFAM: Protein of unknown function (DUF721); hypothetical protein 907732 12843199 Q7C_861 Methylophaga frappieri hypothetical protein YP_006292717.1 907283 D 754477 CDS YP_006292718.1 387129828 12843200 complement(907729..908646) 1 NC_017856.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 908646 12843200 Q7C_862 Methylophaga frappieri UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase YP_006292718.1 907729 R 754477 CDS YP_006292719.1 387129829 12843201 complement(908731..909894) 1 NC_017856.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ 909894 12843201 Q7C_863 Methylophaga frappieri cell division protein FtsZ YP_006292719.1 908731 R 754477 CDS YP_006292720.1 387129830 12843202 complement(909925..911172) 1 NC_017856.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; Cell division protein FtsA 911172 12843202 Q7C_864 Methylophaga frappieri Cell division protein FtsA YP_006292720.1 909925 R 754477 CDS YP_006292721.1 387129831 12843203 complement(911172..911948) 1 NC_017856.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type; Cell division protein FtsQ 911948 12843203 Q7C_865 Methylophaga frappieri Cell division protein FtsQ YP_006292721.1 911172 R 754477 CDS YP_006292722.1 387129832 12843204 complement(911948..912886) 1 NC_017856.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 912886 12843204 Q7C_866 Methylophaga frappieri D-alanine--D-alanine ligase YP_006292722.1 911948 R 754477 CDS YP_006292723.1 387129833 12843205 complement(912883..913773) 1 NC_017856.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 913773 12843205 Q7C_867 Methylophaga frappieri UDP-N-acetylenolpyruvoylglucosamine reductase YP_006292723.1 912883 R 754477 CDS YP_006292724.1 387129834 12843206 complement(913773..915194) 1 NC_017856.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 915194 12843206 Q7C_868 Methylophaga frappieri UDP-N-acetylmuramate--L-alanine ligase YP_006292724.1 913773 R 754477 CDS YP_006292725.1 387129835 12843207 complement(915187..916260) 1 NC_017856.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 916260 12843207 Q7C_869 Methylophaga frappieri UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_006292725.1 915187 R 754477 CDS YP_006292726.1 387129836 12843208 complement(916257..917315) 1 NC_017856.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein FtsW 917315 12843208 Q7C_870 Methylophaga frappieri cell division protein FtsW YP_006292726.1 916257 R 754477 CDS YP_006292727.1 387129837 12843209 complement(917383..918732) 1 NC_017856.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 918732 12843209 Q7C_871 Methylophaga frappieri UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006292727.1 917383 R 754477 CDS YP_006292728.1 387129838 12843210 complement(918729..919811) 1 NC_017856.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 919811 12843210 Q7C_872 Methylophaga frappieri phospho-N-acetylmuramoyl-pentapeptide- transferase YP_006292728.1 918729 R 754477 CDS YP_006292729.1 387129839 12843211 complement(919811..921166) 1 NC_017856.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 921166 12843211 Q7C_873 Methylophaga frappieri UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_006292729.1 919811 R 754477 CDS YP_006292730.1 387129840 12843212 complement(921163..922647) 1 NC_017856.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 922647 12843212 Q7C_874 Methylophaga frappieri UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_006292730.1 921163 R 754477 CDS YP_006292731.1 387129841 12843213 complement(922644..924350) 1 NC_017856.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; Cell division protein FtsI (Peptidoglycan synthetase) 924350 12843213 Q7C_875 Methylophaga frappieri Cell division protein FtsI (Peptidoglycan synthetase) YP_006292731.1 922644 R 754477 CDS YP_006292732.1 387129842 12843214 complement(924347..924640) 1 NC_017856.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; cell division protein FtsL 924640 12843214 Q7C_876 Methylophaga frappieri cell division protein FtsL YP_006292732.1 924347 R 754477 CDS YP_006292733.1 387129843 12843215 complement(924637..925575) 1 NC_017856.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; rRNA small subunit methyltransferase H 925575 12843215 Q7C_877 Methylophaga frappieri rRNA small subunit methyltransferase H YP_006292733.1 924637 R 754477 CDS YP_006292734.1 387129844 12843216 complement(925584..926036) 1 NC_017856.1 PFAM: MraZ protein; TIGRFAM: mraZ protein; cell division protein MraZ 926036 12843216 Q7C_878 Methylophaga frappieri cell division protein MraZ YP_006292734.1 925584 R 754477 CDS YP_006292735.1 387129845 12843217 complement(926721..927569) 1 NC_017856.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; rRNA small subunit methyltransferase I 927569 12843217 Q7C_879 Methylophaga frappieri rRNA small subunit methyltransferase I YP_006292735.1 926721 R 754477 CDS YP_006292736.1 387129846 12843218 927663..929501 1 NC_017856.1 PFAM: LppC putative lipoprotein; LppC putative lipoprotein 929501 12843218 Q7C_880 Methylophaga frappieri LppC putative lipoprotein YP_006292736.1 927663 D 754477 CDS YP_006292737.1 387129847 12843219 929498..929869 1 NC_017856.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; hypothetical protein 929869 12843219 Q7C_881 Methylophaga frappieri hypothetical protein YP_006292737.1 929498 D 754477 CDS YP_006292738.1 387129848 12843220 929921..930496 1 NC_017856.1 PFAM: Putative phospholipid-binding domain; hemolysin 930496 12843220 Q7C_882 Methylophaga frappieri hemolysin YP_006292738.1 929921 D 754477 CDS YP_006292739.1 387129849 12843221 complement(930539..930964) 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; hypothetical protein 930964 12843221 Q7C_883 Methylophaga frappieri hypothetical protein YP_006292739.1 930539 R 754477 CDS YP_006292740.1 387129850 12843222 931020..931415 1 NC_017856.1 PFAM: PilZ domain; carbamoylphosphate synthase large subunit 931415 12843222 Q7C_884 Methylophaga frappieri carbamoylphosphate synthase large subunit YP_006292740.1 931020 D 754477 CDS YP_006292741.1 387129851 12843223 complement(931395..932783) 1 NC_017856.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 932783 12843223 Q7C_885 Methylophaga frappieri DNA repair protein RadA YP_006292741.1 931395 R 754477 CDS YP_006292742.1 387129852 12843224 complement(932776..933855) 1 NC_017856.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 933855 12843224 Q7C_886 Methylophaga frappieri alanine racemase YP_006292742.1 932776 R 754477 CDS YP_006292743.1 387129853 12843225 complement(933852..935264) 1 NC_017856.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase 935264 12843225 Q7C_887 Methylophaga frappieri replicative DNA helicase YP_006292743.1 933852 R 754477 CDS YP_006292744.1 387129854 12843226 complement(935357..935905) 1 NC_017856.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 935905 12843226 Q7C_888 Methylophaga frappieri 50S ribosomal protein L9 YP_006292744.1 935357 R 754477 CDS YP_006292745.1 387129855 12843227 complement(935929..936861) 1 NC_017856.1 PFAM: Predicted membrane protein (DUF2232); hypothetical protein 936861 12843227 Q7C_889 Methylophaga frappieri hypothetical protein YP_006292745.1 935929 R 754477 CDS YP_006292746.1 387129856 12843228 complement(936895..937122) 1 NC_017856.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 937122 12843228 Q7C_890 Methylophaga frappieri 30S ribosomal protein S18 YP_006292746.1 936895 R 754477 CDS YP_006292747.1 387129857 12843229 complement(937149..937496) 1 NC_017856.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 937496 12843229 Q7C_891 Methylophaga frappieri 30S ribosomal protein S6 YP_006292747.1 937149 R 754477 CDS YP_006292748.1 387129858 12843230 complement(937610..938335) 1 NC_017856.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB 938335 12843230 Q7C_892 Methylophaga frappieri 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB YP_006292748.1 937610 R 754477 CDS YP_006292749.1 387129859 12843231 complement(938376..939050) 1 NC_017856.1 PFAM: Rickettsia 17 kDa surface antigen; OmpA family; Outer membrane protein A precursor 939050 12843231 Q7C_893 Methylophaga frappieri Outer membrane protein A precursor YP_006292749.1 938376 R 754477 CDS YP_006292750.1 387129860 12843232 939144..939665 1 NC_017856.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein MoaB 939665 12843232 Q7C_894 Methylophaga frappieri molybdenum cofactor biosynthesis protein MoaB YP_006292750.1 939144 D 754477 CDS YP_006292751.1 387129861 12843233 939662..939910 1 NC_017856.1 PFAM: Glutaredoxin-like domain (DUF836); glutaredoxin-like protein 939910 12843233 Q7C_895 Methylophaga frappieri glutaredoxin-like protein YP_006292751.1 939662 D 754477 CDS YP_006292752.1 387129862 12843234 939963..940847 1 NC_017856.1 alpha/beta hydrolase 940847 12843234 Q7C_896 Methylophaga frappieri alpha/beta hydrolase YP_006292752.1 939963 D 754477 CDS YP_006292753.1 387129863 12843235 940881..942032 1 NC_017856.1 PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D; Ribonuclease D 942032 12843235 Q7C_897 Methylophaga frappieri Ribonuclease D YP_006292753.1 940881 D 754477 CDS YP_006292754.1 387129864 12843236 942032..942916 1 NC_017856.1 PFAM: pfkB family carbohydrate kinase; sugar kinase 942916 12843236 Q7C_898 Methylophaga frappieri sugar kinase YP_006292754.1 942032 D 754477 CDS YP_006292755.1 387129865 12843237 complement(942959..943366) 1 NC_017856.1 PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 943366 12843237 Q7C_899 Methylophaga frappieri phosphatidylglycerophosphatase A YP_006292755.1 942959 R 754477 CDS YP_006292756.1 387129866 12843238 complement(943431..944399) 1 NC_017856.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; Thiamine-monophosphate kinase 944399 12843238 Q7C_900 Methylophaga frappieri Thiamine-monophosphate kinase YP_006292756.1 943431 R 754477 CDS YP_006292757.1 387129867 12843239 complement(944412..944870) 1 NC_017856.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription termination protein NusB 944870 12843239 Q7C_901 Methylophaga frappieri transcription termination protein NusB YP_006292757.1 944412 R 754477 CDS YP_006292758.1 387129868 12843240 complement(944870..945352) 1 NC_017856.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 945352 12843240 Q7C_902 Methylophaga frappieri 6,7-dimethyl-8-ribityllumazine synthase YP_006292758.1 944870 R 754477 CDS YP_006292759.1 387129869 12843241 complement(945425..946291) 1 NC_017856.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); bis(5'-nucleosyl)-tetraphosphatase 946291 12843241 Q7C_903 Methylophaga frappieri bis(5'-nucleosyl)-tetraphosphatase YP_006292759.1 945425 R 754477 CDS YP_006292760.1 387129870 12843242 946486..946938 1 NC_017856.1 PFAM: Protein of unknown function (DUF3465); hypothetical protein 946938 12843242 Q7C_904 Methylophaga frappieri hypothetical protein YP_006292760.1 946486 D 754477 CDS YP_006292761.1 387129871 12843243 947014..947448 1 NC_017856.1 PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific uracil/thymine DNA-glycosylase 947448 12843243 Q7C_905 Methylophaga frappieri G:T/U mismatch-specific uracil/thymine DNA-glycosylase YP_006292761.1 947014 D 754477 CDS YP_006292762.1 387129872 12843244 complement(947572..949743) 1 NC_017856.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; Catalase / Peroxidase 949743 12843244 Q7C_906 Methylophaga frappieri Catalase / Peroxidase YP_006292762.1 947572 R 754477 CDS YP_006292763.1 387129873 12843245 complement(949860..950030) 1 NC_017856.1 hypothetical protein 950030 12843245 Q7C_907 Methylophaga frappieri hypothetical protein YP_006292763.1 949860 R 754477 CDS YP_006292764.1 387129874 12843246 complement(950040..951473) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase 951473 12843246 Q7C_908 Methylophaga frappieri sulfate adenylyltransferase YP_006292764.1 950040 R 754477 CDS YP_006292765.1 387129875 12843247 complement(951475..952380) 1 NC_017856.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase 952380 12843247 Q7C_909 Methylophaga frappieri sulfate adenylyltransferase YP_006292765.1 951475 R 754477 CDS YP_006292766.1 387129876 12843248 complement(952393..953091) 1 NC_017856.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); Phosphoadenylyl-sulfate reductase/Adenylyl-sulfate reductase 953091 12843248 Q7C_910 Methylophaga frappieri Phosphoadenylyl-sulfate reductase/Adenylyl-sulfate reductase YP_006292766.1 952393 R 754477 CDS YP_006292767.1 387129877 12843249 complement(953084..953314) 1 NC_017856.1 hypothetical protein 953314 12843249 Q7C_911 Methylophaga frappieri hypothetical protein YP_006292767.1 953084 R 754477 CDS YP_006292768.1 387129878 12843250 complement(953302..954102) 1 NC_017856.1 PFAM: Sulfite exporter TauE/SafE; sulfate permease 954102 12843250 Q7C_912 Methylophaga frappieri sulfate permease YP_006292768.1 953302 R 754477 CDS YP_006292769.1 387129879 12843251 954344..954586 1 NC_017856.1 hypothetical protein 954586 12843251 Q7C_913 Methylophaga frappieri hypothetical protein YP_006292769.1 954344 D 754477 CDS YP_006292770.1 387129880 12843252 954649..955569 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Cys regulon transcriptional activator CysB 955569 12843252 Q7C_914 Methylophaga frappieri Cys regulon transcriptional activator CysB YP_006292770.1 954649 D 754477 CDS YP_006292771.1 387129881 12843253 955661..956227 1 NC_017856.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD gene product 956227 12843253 Q7C_915 Methylophaga frappieri MxaD gene product YP_006292771.1 955661 D 754477 CDS YP_006292772.1 387129882 12843254 complement(956400..957026) 1 NC_017856.1 hypothetical protein 957026 12843254 Q7C_916 Methylophaga frappieri hypothetical protein YP_006292772.1 956400 R 754477 CDS YP_006292773.1 387129883 12843255 957033..957653 1 NC_017856.1 PFAM: Phage integrase family; phage integrase 957653 12843255 Q7C_917 Methylophaga frappieri phage integrase YP_006292773.1 957033 D 754477 CDS YP_006292774.1 387129884 12843256 957792..958175 1 NC_017856.1 PFAM: Protein of unknown function (DUF1044); hypothetical protein 958175 12843256 Q7C_918 Methylophaga frappieri hypothetical protein YP_006292774.1 957792 D 754477 CDS YP_006292775.1 387129885 12843257 958159..958461 1 NC_017856.1 DNA-binding protein 958461 12843257 Q7C_919 Methylophaga frappieri DNA-binding protein YP_006292775.1 958159 D 754477 CDS YP_006292776.1 387129886 12843258 958484..959302 1 NC_017856.1 PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: TIGR02391 family protein; hypothetical protein 959302 12843258 Q7C_920 Methylophaga frappieri hypothetical protein YP_006292776.1 958484 D 754477 CDS YP_006292777.1 387129887 12843259 959316..960599 1 NC_017856.1 hypothetical protein 960599 12843259 Q7C_921 Methylophaga frappieri hypothetical protein YP_006292777.1 959316 D 754477 CDS YP_006292778.1 387129888 12843260 complement(960677..961465) 1 NC_017856.1 hypothetical protein 961465 12843260 Q7C_922 Methylophaga frappieri hypothetical protein YP_006292778.1 960677 R 754477 CDS YP_006292779.1 387129889 12843261 complement(961472..962374) 1 NC_017856.1 hypothetical protein 962374 12843261 Q7C_923 Methylophaga frappieri hypothetical protein YP_006292779.1 961472 R 754477 CDS YP_006292780.1 387129890 12843262 complement(962448..963281) 1 NC_017856.1 hypothetical protein 963281 12843262 Q7C_924 Methylophaga frappieri hypothetical protein YP_006292780.1 962448 R 754477 CDS YP_006292781.1 387129891 12843263 963267..963656 1 NC_017856.1 hypothetical protein 963656 12843263 Q7C_925 Methylophaga frappieri hypothetical protein YP_006292781.1 963267 D 754477 CDS YP_006292782.1 387129892 12843264 963653..965908 1 NC_017856.1 PFAM: ThiF family; dinucleotide-utilizing protein 965908 12843264 Q7C_926 Methylophaga frappieri dinucleotide-utilizing protein YP_006292782.1 963653 D 754477 CDS YP_006292783.1 387129893 12843265 965954..967024 1 NC_017856.1 hypothetical protein 967024 12843265 Q7C_927 Methylophaga frappieri hypothetical protein YP_006292783.1 965954 D 754477 CDS YP_006292784.1 387129894 12843266 967217..968233 1 NC_017856.1 hypothetical protein 968233 12843266 Q7C_928 Methylophaga frappieri hypothetical protein YP_006292784.1 967217 D 754477 CDS YP_006292785.1 387129895 12843267 968635..969141 1 NC_017856.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 969141 12843267 Q7C_929 Methylophaga frappieri DNA repair protein RadC YP_006292785.1 968635 D 754477 CDS YP_006292786.1 387129896 12843268 969410..969799 1 NC_017856.1 FIG01198175; hypothetical protein 969799 12843268 Q7C_930 Methylophaga frappieri hypothetical protein YP_006292786.1 969410 D 754477 CDS YP_006292787.1 387129897 12843269 complement(969805..970173) 1 NC_017856.1 hypothetical protein 970173 12843269 Q7C_931 Methylophaga frappieri hypothetical protein YP_006292787.1 969805 R 754477 CDS YP_006292788.1 387129898 12843270 complement(970303..971010) 1 NC_017856.1 hypothetical protein 971010 12843270 Q7C_932 Methylophaga frappieri hypothetical protein YP_006292788.1 970303 R 754477 CDS YP_006292789.1 387129899 12843271 971095..971418 1 NC_017856.1 PFAM: Domain of unknown function (DUF932); hypothetical protein 971418 12843271 Q7C_933 Methylophaga frappieri hypothetical protein YP_006292789.1 971095 D 754477 CDS YP_006292790.1 387129900 12843272 971493..973550 1 NC_017856.1 PFAM: ParB-like nuclease domain; plasmid stabilization protein 973550 12843272 Q7C_934 Methylophaga frappieri plasmid stabilization protein YP_006292790.1 971493 D 754477 CDS YP_006292791.1 387129901 12843273 973522..974436 1 NC_017856.1 hypothetical protein 974436 12843273 Q7C_935 Methylophaga frappieri hypothetical protein YP_006292791.1 973522 D 754477 CDS YP_006292792.1 387129902 12843274 974600..974914 1 NC_017856.1 PFAM: Protein of unknown function (DUF736); hypothetical protein 974914 12843274 Q7C_936 Methylophaga frappieri hypothetical protein YP_006292792.1 974600 D 754477 CDS YP_006292793.1 387129903 12843275 complement(975236..975448) 1 NC_017856.1 Transcriptional regulator, PbsX family 975448 12843275 Q7C_937 Methylophaga frappieri Transcriptional regulator, PbsX family YP_006292793.1 975236 R 754477 CDS YP_006292794.1 387129904 12843276 complement(975450..975566) 1 NC_017856.1 hypothetical protein 975566 12843276 Q7C_938 Methylophaga frappieri hypothetical protein YP_006292794.1 975450 R 754477 CDS YP_006292795.1 387129905 12843277 975794..976141 1 NC_017856.1 PFAM: Protein of unknown function (DUF2958); lipoprotein 976141 12843277 Q7C_939 Methylophaga frappieri lipoprotein YP_006292795.1 975794 D 754477 CDS YP_006292796.1 387129906 12843278 976251..976376 1 NC_017856.1 hypothetical protein 976376 12843278 Q7C_940 Methylophaga frappieri hypothetical protein YP_006292796.1 976251 D 754477 CDS YP_006292797.1 387129907 12843279 complement(976386..976511) 1 NC_017856.1 hypothetical protein 976511 12843279 Q7C_941 Methylophaga frappieri hypothetical protein YP_006292797.1 976386 R 754477 CDS YP_006292798.1 387129908 12843280 976488..977255 1 NC_017856.1 PFAM: Uncharacterized conserved protein (DUF2285); hypothetical protein 977255 12843280 Q7C_942 Methylophaga frappieri hypothetical protein YP_006292798.1 976488 D 754477 CDS YP_006292799.1 387129909 12843281 977367..977651 1 NC_017856.1 TIGRFAM: DNA binding domain, excisionase family; hypothetical protein 977651 12843281 Q7C_943 Methylophaga frappieri hypothetical protein YP_006292799.1 977367 D 754477 CDS YP_006292800.1 387129910 12843282 977678..978523 1 NC_017856.1 PFAM: Replication initiator protein A; Plasmid replication initiator protein 978523 12843282 Q7C_944 Methylophaga frappieri Plasmid replication initiator protein YP_006292800.1 977678 D 754477 CDS YP_006292801.1 387129911 12843283 978538..978768 1 NC_017856.1 hypothetical protein 978768 12843283 Q7C_945 Methylophaga frappieri hypothetical protein YP_006292801.1 978538 D 754477 CDS YP_006292802.1 387129912 12843284 978765..979403 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome (plasmid) partitioning protein ParA 979403 12843284 Q7C_946 Methylophaga frappieri Chromosome (plasmid) partitioning protein ParA YP_006292802.1 978765 D 754477 CDS YP_006292803.1 387129913 12843285 979400..979672 1 NC_017856.1 hypothetical protein 979672 12843285 Q7C_947 Methylophaga frappieri hypothetical protein YP_006292803.1 979400 D 754477 CDS YP_006292804.1 387129914 12843286 979669..980202 1 NC_017856.1 PFAM: Protein of unknown function (DUF2840); glycosidase 980202 12843286 Q7C_948 Methylophaga frappieri glycosidase YP_006292804.1 979669 D 754477 CDS YP_006292805.1 387129915 12843287 980199..980795 1 NC_017856.1 PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF; type IV secretory pathway, protease TraF 980795 12843287 Q7C_949 Methylophaga frappieri type IV secretory pathway, protease TraF YP_006292805.1 980199 D 754477 CDS YP_006292806.1 387129916 12843288 980792..981235 1 NC_017856.1 hypothetical protein 981235 12843288 Q7C_950 Methylophaga frappieri hypothetical protein YP_006292806.1 980792 D 754477 CDS YP_006292807.1 387129917 12843289 981186..981836 1 NC_017856.1 hypothetical protein 981836 12843289 Q7C_951 Methylophaga frappieri hypothetical protein YP_006292807.1 981186 D 754477 CDS YP_006292808.1 387129918 12843290 981823..983217 1 NC_017856.1 PFAM: Protein of unknown function (DUF3363); type IV secretory pathway, VirD2 components (relaxase) 983217 12843290 Q7C_952 Methylophaga frappieri type IV secretory pathway, VirD2 components (relaxase) YP_006292808.1 981823 D 754477 CDS YP_006292809.1 387129919 12843291 complement(983272..983421) 1 NC_017856.1 hypothetical protein 983421 12843291 Q7C_953 Methylophaga frappieri hypothetical protein YP_006292809.1 983272 R 754477 CDS YP_006292810.1 387129920 12843292 complement(984109..984816) 1 NC_017856.1 PFAM: Transposase; transposase 984816 12843292 Q7C_954 Methylophaga frappieri transposase YP_006292810.1 984109 R 754477 CDS YP_006292811.1 387129921 12843293 984787..985614 1 NC_017856.1 hypothetical protein 985614 12843293 Q7C_955 Methylophaga frappieri hypothetical protein YP_006292811.1 984787 D 754477 CDS YP_006292812.1 387129922 12843294 985628..986521 1 NC_017856.1 PFAM: Phosphotransferase enzyme family; Macrolide 2'-phosphotransferase I 986521 12843294 Q7C_956 Methylophaga frappieri Macrolide 2'-phosphotransferase I YP_006292812.1 985628 D 754477 CDS YP_006292813.1 387129923 12843295 986521..987798 1 NC_017856.1 PFAM: Major Facilitator Superfamily; Mrx 987798 12843295 Q7C_957 Methylophaga frappieri Mrx YP_006292813.1 986521 D 754477 CDS YP_006292814.1 387129924 12843296 987808..988815 1 NC_017856.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator 988815 12843296 Q7C_958 Methylophaga frappieri LysR family transcriptional regulator YP_006292814.1 987808 D 754477 CDS YP_006292815.1 387129925 12843297 988812..989075 1 NC_017856.1 lipoprotein 989075 12843297 Q7C_959 Methylophaga frappieri lipoprotein YP_006292815.1 988812 D 754477 CDS YP_006292816.1 387129926 12843298 989311..991326 1 NC_017856.1 PFAM: TraG/TraD family; type IV secretion system protein VirD4 991326 12843298 Q7C_960 Methylophaga frappieri type IV secretion system protein VirD4 YP_006292816.1 989311 D 754477 CDS YP_006292817.1 387129927 12843299 991323..991799 1 NC_017856.1 PFAM: Ribbon-helix-helix protein, copG family; CopG domain-containing protein 991799 12843299 Q7C_961 Methylophaga frappieri CopG domain-containing protein YP_006292817.1 991323 D 754477 CDS YP_006292818.1 387129928 12843300 991796..992863 1 NC_017856.1 PFAM: Type II/IV secretion system protein; TIGRFAM: P-type conjugative transfer ATPase TrbB; Conjugative transfer protein TrbB 992863 12843300 Q7C_962 Methylophaga frappieri Conjugative transfer protein TrbB YP_006292818.1 991796 D 754477 CDS YP_006292819.1 387129929 12843301 993243..993515 1 NC_017856.1 PFAM: Type IV secretory pathway, VirB3-like protein; Conjugative transfer protein TrbD 993515 12843301 Q7C_963 Methylophaga frappieri Conjugative transfer protein TrbD YP_006292819.1 993243 D 754477 CDS YP_006292820.1 387129930 12843302 993526..995958 1 NC_017856.1 PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; Conjugative transfer protein TrbE 995958 12843302 Q7C_964 Methylophaga frappieri Conjugative transfer protein TrbE YP_006292820.1 993526 D 754477 CDS YP_006292821.1 387129931 12843303 995955..996698 1 NC_017856.1 TIGRFAM: P-type conjugative transfer protein TrbJ; Conjugative transfer protein TrbJ 996698 12843303 Q7C_965 Methylophaga frappieri Conjugative transfer protein TrbJ YP_006292821.1 995955 D 754477 CDS YP_006292822.1 387129932 12843304 996711..998090 1 NC_017856.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL; Conjugative transfer protein TrbL 998090 12843304 Q7C_966 Methylophaga frappieri Conjugative transfer protein TrbL YP_006292822.1 996711 D 754477 CDS YP_006292823.1 387129933 12843305 998108..998812 1 NC_017856.1 PFAM: VirB8 protein; Conjugative transfer protein TrbF 998812 12843305 Q7C_967 Methylophaga frappieri Conjugative transfer protein TrbF YP_006292823.1 998108 D 754477 CDS YP_006292824.1 387129934 12843306 998809..999813 1 NC_017856.1 PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; Conjugative transfer protein TrbG 999813 12843306 Q7C_968 Methylophaga frappieri Conjugative transfer protein TrbG YP_006292824.1 998809 D 754477 CDS YP_006292825.1 387129935 12843307 999816..1001093 1 NC_017856.1 PFAM: Bacterial conjugation TrbI-like protein; Conjugative transfer protein TrbI 1001093 12843307 Q7C_969 Methylophaga frappieri Conjugative transfer protein TrbI YP_006292825.1 999816 D 754477 CDS YP_006292826.1 387129936 12843308 1001090..1001311 1 NC_017856.1 PFAM: Protein of unknown function (DUF2274); hypothetical protein 1001311 12843308 Q7C_970 Methylophaga frappieri hypothetical protein YP_006292826.1 1001090 D 754477 CDS YP_006292827.1 387129937 12843309 1002165..1004231 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor 1004231 12843309 Q7C_971 Methylophaga frappieri TonB-dependent receptor YP_006292827.1 1002165 D 754477 CDS YP_006292828.1 387129938 12843310 1004242..1004502 1 NC_017856.1 PFAM: YKOF-related Family; Disaggregatase related; YKOF-like protein 1004502 12843310 Q7C_972 Methylophaga frappieri YKOF-like protein YP_006292828.1 1004242 D 754477 CDS YP_006292829.1 387129939 12843311 1004502..1005122 1 NC_017856.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; thiamin transporter PnuT 1005122 12843311 Q7C_973 Methylophaga frappieri thiamin transporter PnuT YP_006292829.1 1004502 D 754477 CDS YP_006292830.1 387129940 12843312 1005122..1005781 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-deoxyglucose-6-phosphate hydrolase YniC 1005781 12843312 Q7C_974 Methylophaga frappieri 2-deoxyglucose-6-phosphate hydrolase YniC YP_006292830.1 1005122 D 754477 CDS YP_006292831.1 387129941 12843313 1005959..1006789 1 NC_017856.1 PFAM: Protein of unknown function (DUF2971); hypothetical protein 1006789 12843313 Q7C_975 Methylophaga frappieri hypothetical protein YP_006292831.1 1005959 D 754477 CDS YP_006292832.1 387129942 12843314 1007291..1007413 1 NC_017856.1 hypothetical protein 1007413 12843314 Q7C_976 Methylophaga frappieri hypothetical protein YP_006292832.1 1007291 D 754477 CDS YP_006292833.1 387129943 12843315 complement(1008049..1008489) 1 NC_017856.1 hypothetical protein 1008489 12843315 Q7C_977 Methylophaga frappieri hypothetical protein YP_006292833.1 1008049 R 754477 CDS YP_006292834.1 387129944 12843316 complement(1008776..1010884) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 1010884 12843316 Q7C_978 Methylophaga frappieri ferrichrome-iron receptor YP_006292834.1 1008776 R 754477 CDS YP_006292835.1 387129945 12843317 1011098..1011463 1 NC_017856.1 hypothetical protein 1011463 12843317 Q7C_979 Methylophaga frappieri hypothetical protein YP_006292835.1 1011098 D 754477 CDS YP_006292836.1 387129946 12843318 1011489..1011842 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 1011842 12843318 Q7C_980 Methylophaga frappieri hypothetical protein YP_006292836.1 1011489 D 754477 CDS YP_006292837.1 387129947 12843319 complement(1011858..1012754) 1 NC_017856.1 hypothetical protein 1012754 12843319 Q7C_981 Methylophaga frappieri hypothetical protein YP_006292837.1 1011858 R 754477 CDS YP_006292838.1 387129948 12843320 complement(1012748..1013422) 1 NC_017856.1 PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1013422 12843320 Q7C_982 Methylophaga frappieri 3-oxoacyl-ACP reductase YP_006292838.1 1012748 R 754477 CDS YP_006292839.1 387129949 12843321 complement(1013419..1014480) 1 NC_017856.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; Methylthioribose-1-phosphate isomerase 1014480 12843321 Q7C_983 Methylophaga frappieri Methylthioribose-1-phosphate isomerase YP_006292839.1 1013419 R 754477 CDS YP_006292840.1 387129950 12843322 1014518..1015837 1 NC_017856.1 PFAM: Amidohydrolase family; S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase 1015837 12843322 Q7C_984 Methylophaga frappieri S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase YP_006292840.1 1014518 D 754477 CDS YP_006292841.1 387129951 12843323 1015834..1016538 1 NC_017856.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1016538 12843323 Q7C_985 Methylophaga frappieri 3-demethylubiquinone-9 3-methyltransferase YP_006292841.1 1015834 D 754477 CDS YP_006292842.1 387129952 12843324 1016535..1017197 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase 1017197 12843324 Q7C_986 Methylophaga frappieri phosphoglycolate phosphatase YP_006292842.1 1016535 D 754477 CDS YP_006292843.1 387129953 12843325 1017185..1018474 1 NC_017856.1 PFAM: RmuC family; DNA recombination protein RmuC 1018474 12843325 Q7C_987 Methylophaga frappieri DNA recombination protein RmuC YP_006292843.1 1017185 D 754477 CDS YP_006292844.1 387129954 12843326 1018458..1019351 1 NC_017856.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; phytoene synthase 1019351 12843326 Q7C_988 Methylophaga frappieri phytoene synthase YP_006292844.1 1018458 D 754477 CDS YP_006292845.1 387129955 12843333 complement(1027612..1028619) 1 NC_017856.1 AraC family transcriptional regulator 1028619 12843333 Q7C_996 Methylophaga frappieri AraC family transcriptional regulator YP_006292845.1 1027612 R 754477 CDS YP_006292846.1 387129956 12843334 1028727..1029218 1 NC_017856.1 hypothetical protein 1029218 12843334 Q7C_997 Methylophaga frappieri hypothetical protein YP_006292846.1 1028727 D 754477 CDS YP_006292847.1 387129957 12843335 complement(1029270..1030466) 1 NC_017856.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase cluster 1 1030466 12843335 Q7C_998 Methylophaga frappieri tyrosyl-tRNA synthetase cluster 1 YP_006292847.1 1029270 R 754477 CDS YP_006292848.1 387129958 12843336 1030639..1032159 1 NC_017856.1 PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23; Peptidase, M23/M37 family 1032159 12843336 Q7C_999 Methylophaga frappieri Peptidase, M23/M37 family YP_006292848.1 1030639 D 754477 CDS YP_006292849.1 387129959 12843337 1032159..1033286 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0075); anhydro-N-acetylmuramic acid kinase 1033286 12843337 Q7C_1000 Methylophaga frappieri anhydro-N-acetylmuramic acid kinase YP_006292849.1 1032159 D 754477 CDS YP_006292850.1 387129960 12843338 complement(1033288..1034757) 1 NC_017856.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 1034757 12843338 Q7C_1001 Methylophaga frappieri 4-alpha-glucanotransferase YP_006292850.1 1033288 R 754477 CDS YP_006292851.1 387129961 12843339 complement(1034760..1036442) 1 NC_017856.1 PFAM: Glycosyl hydrolase family 57; amylopullulanase 1036442 12843339 Q7C_1002 Methylophaga frappieri amylopullulanase YP_006292851.1 1034760 R 754477 CDS YP_006292852.1 387129962 12843340 complement(1036432..1037700) 1 NC_017856.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1037700 12843340 Q7C_1003 Methylophaga frappieri glucose-1-phosphate adenylyltransferase YP_006292852.1 1036432 R 754477 CDS YP_006292853.1 387129963 12843341 1037798..1039981 1 NC_017856.1 PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; 1,4-alpha-glucan branching protein 1039981 12843341 Q7C_1004 Methylophaga frappieri 1,4-alpha-glucan branching protein YP_006292853.1 1037798 D 754477 CDS YP_006292854.1 387129964 12843342 complement(1040023..1041660) 1 NC_017856.1 PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 1041660 12843342 Q7C_1005 Methylophaga frappieri glucose-6-phosphate isomerase YP_006292854.1 1040023 R 754477 CDS YP_006292855.1 387129965 12843343 complement(1041665..1042945) 1 NC_017856.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 1042945 12843343 Q7C_1006 Methylophaga frappieri histidyl-tRNA synthetase YP_006292855.1 1041665 R 754477 CDS YP_006292856.1 387129966 12843344 complement(1042948..1044075) 1 NC_017856.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1044075 12843344 Q7C_1007 Methylophaga frappieri 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006292856.1 1042948 R 754477 CDS YP_006292857.1 387129967 12843345 complement(1044075..1045127) 1 NC_017856.1 hypothetical protein 1045127 12843345 Q7C_1008 Methylophaga frappieri hypothetical protein YP_006292857.1 1044075 R 754477 CDS YP_006292858.1 387129968 12843346 complement(1045124..1045771) 1 NC_017856.1 PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW; tfp pilus assembly protein PilF 1045771 12843346 Q7C_1009 Methylophaga frappieri tfp pilus assembly protein PilF YP_006292858.1 1045124 R 754477 CDS YP_006292859.1 387129969 12843347 complement(1045882..1046727) 1 NC_017856.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; ribosomal RNA large subunit methyltransferase N 1046727 12843347 Q7C_1010 Methylophaga frappieri ribosomal RNA large subunit methyltransferase N YP_006292859.1 1045882 R 754477 CDS YP_006292860.1 387129970 12843348 complement(1046991..1047422) 1 NC_017856.1 PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 1047422 12843348 Q7C_1011 Methylophaga frappieri nucleoside diphosphate kinase YP_006292860.1 1046991 R 754477 CDS YP_006292861.1 387129971 12843349 1047581..1048444 1 NC_017856.1 PFAM: ATP-NAD kinase; NAD kinase 1048444 12843349 Q7C_1012 Methylophaga frappieri NAD kinase YP_006292861.1 1047581 D 754477 CDS YP_006292862.1 387129972 12843350 1048438..1050114 1 NC_017856.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 1050114 12843350 Q7C_1013 Methylophaga frappieri DNA repair protein RecN YP_006292862.1 1048438 D 754477 CDS YP_006292863.1 387129973 12843351 complement(1050111..1050533) 1 NC_017856.1 PFAM: Ferric uptake regulator family; Ferric uptake regulation protein FUR 1050533 12843351 Q7C_1014 Methylophaga frappieri Ferric uptake regulation protein FUR YP_006292863.1 1050111 R 754477 CDS YP_006292864.1 387129974 12843352 1050611..1051192 1 NC_017856.1 PFAM: SmpA / OmlA family; Outer membrane lipoprotein SmpA 1051192 12843352 Q7C_1015 Methylophaga frappieri Outer membrane lipoprotein SmpA YP_006292864.1 1050611 D 754477 CDS YP_006292865.1 387129975 12843353 complement(1051242..1051877) 1 NC_017856.1 PFAM: Carbonic anhydrase; carbonic anhydrase 1051877 12843353 Q7C_1016 Methylophaga frappieri carbonic anhydrase YP_006292865.1 1051242 R 754477 CDS YP_006292866.1 387129976 12843354 complement(1051886..1052521) 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1052521 12843354 Q7C_1017 Methylophaga frappieri Zn-dependent hydrolase YP_006292866.1 1051886 R 754477 CDS YP_006292867.1 387129977 12843355 complement(1052581..1053822) 1 NC_017856.1 hypothetical protein 1053822 12843355 Q7C_1018 Methylophaga frappieri hypothetical protein YP_006292867.1 1052581 R 754477 CDS YP_006292868.1 387129978 12843356 complement(1053921..1054325) 1 NC_017856.1 hypothetical protein 1054325 12843356 Q7C_1019 Methylophaga frappieri hypothetical protein YP_006292868.1 1053921 R 754477 CDS YP_006292869.1 387129979 12843357 1054470..1054769 1 NC_017856.1 PFAM: PilZ domain; glycosyltransferase 1054769 12843357 Q7C_1020 Methylophaga frappieri glycosyltransferase YP_006292869.1 1054470 D 754477 CDS YP_006292870.1 387129980 12843358 complement(1054771..1055412) 1 NC_017856.1 PFAM: Ubiquinone biosynthesis protein COQ7; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1055412 12843358 Q7C_1021 Methylophaga frappieri 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_006292870.1 1054771 R 754477 CDS YP_006292871.1 387129981 12843359 complement(1055416..1056489) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1056489 12843359 Q7C_1022 Methylophaga frappieri diguanylate cyclase YP_006292871.1 1055416 R 754477 CDS YP_006292872.1 387129982 12843360 complement(1056609..1057550) 1 NC_017856.1 PFAM: CheW-like domain; Response regulator receiver domain; Chemotaxis protein CheV 1057550 12843360 Q7C_1023 Methylophaga frappieri Chemotaxis protein CheV YP_006292872.1 1056609 R 754477 CDS YP_006292873.1 387129983 12843362 1058016..1060184 1 NC_017856.1 PFAM: RNB domain; Ribonuclease B OB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; 3'-to-5' exoribonuclease RNase R 1060184 12843362 Q7C_1025 Methylophaga frappieri 3'-to-5' exoribonuclease RNase R YP_006292873.1 1058016 D 754477 CDS YP_006292874.1 387129984 12843364 1060380..1061261 1 NC_017856.1 PFAM: HDOD domain; signal transduction protein 1061261 12843364 Q7C_1027 Methylophaga frappieri signal transduction protein YP_006292874.1 1060380 D 754477 CDS YP_006292875.1 387129985 12843366 complement(1062056..1062364) 1 NC_017856.1 FIG01062552; hypothetical protein 1062364 12843366 Q7C_1029 Methylophaga frappieri hypothetical protein YP_006292875.1 1062056 R 754477 CDS YP_006292876.1 387129986 12843367 complement(1062374..1062502) 1 NC_017856.1 FIG01062552; hypothetical protein 1062502 12843367 Q7C_1030 Methylophaga frappieri hypothetical protein YP_006292876.1 1062374 R 754477 CDS YP_006292877.1 387129987 12843368 complement(1062773..1063207) 1 NC_017856.1 hypothetical protein 1063207 12843368 Q7C_1031 Methylophaga frappieri hypothetical protein YP_006292877.1 1062773 R 754477 CDS YP_006292878.1 387129988 12843369 complement(1063331..1063552) 1 NC_017856.1 hypothetical protein 1063552 12843369 Q7C_1032 Methylophaga frappieri hypothetical protein YP_006292878.1 1063331 R 754477 CDS YP_006292879.1 387129989 12843370 complement(1063799..1064002) 1 NC_017856.1 hypothetical protein 1064002 12843370 Q7C_1033 Methylophaga frappieri hypothetical protein YP_006292879.1 1063799 R 754477 CDS YP_006292880.1 387129990 12843371 complement(1064042..1064290) 1 NC_017856.1 hypothetical protein 1064290 12843371 Q7C_1034 Methylophaga frappieri hypothetical protein YP_006292880.1 1064042 R 754477 CDS YP_006292881.1 387129991 12843372 complement(1064357..1064584) 1 NC_017856.1 hypothetical protein 1064584 12843372 Q7C_1035 Methylophaga frappieri hypothetical protein YP_006292881.1 1064357 R 754477 CDS YP_006292882.1 387129992 12843373 complement(1064651..1064935) 1 NC_017856.1 hypothetical protein 1064935 12843373 Q7C_1036 Methylophaga frappieri hypothetical protein YP_006292882.1 1064651 R 754477 CDS YP_006292883.1 387129993 12843374 complement(1064999..1065124) 1 NC_017856.1 hypothetical protein 1065124 12843374 Q7C_1037 Methylophaga frappieri hypothetical protein YP_006292883.1 1064999 R 754477 CDS YP_006292884.1 387129994 12843375 complement(1065360..1065785) 1 NC_017856.1 hypothetical protein 1065785 12843375 Q7C_1038 Methylophaga frappieri hypothetical protein YP_006292884.1 1065360 R 754477 CDS YP_006292885.1 387129995 12843376 1066146..1066289 1 NC_017856.1 hypothetical protein 1066289 12843376 Q7C_1039 Methylophaga frappieri hypothetical protein YP_006292885.1 1066146 D 754477 CDS YP_006292886.1 387129996 12843377 complement(1066331..1066882) 1 NC_017856.1 PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST 1066882 12843377 Q7C_1040 Methylophaga frappieri CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST YP_006292886.1 1066331 R 754477 CDS YP_006292887.1 387129997 12843378 complement(1066894..1067919) 1 NC_017856.1 PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3; CRISPR type I-F/YPEST-associated protein Csy3 1067919 12843378 Q7C_1041 Methylophaga frappieri CRISPR type I-F/YPEST-associated protein Csy3 YP_006292887.1 1066894 R 754477 CDS YP_006292888.1 387129998 12843379 complement(1067940..1068881) 1 NC_017856.1 PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2; CRISPR type I-F/YPEST-associated protein Csy2 1068881 12843379 Q7C_1042 Methylophaga frappieri CRISPR type I-F/YPEST-associated protein Csy2 YP_006292888.1 1067940 R 754477 CDS YP_006292889.1 387129999 12843380 complement(1068878..1070143) 1 NC_017856.1 PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1; CRISPR type I-F/YPEST-associated protein Csy1 1070143 12843380 Q7C_1043 Methylophaga frappieri CRISPR type I-F/YPEST-associated protein Csy1 YP_006292889.1 1068878 R 754477 CDS YP_006292890.1 387130000 12843381 complement(1070136..1073534) 1 NC_017856.1 TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3, subtype I-F/YPEST 1073534 12843381 Q7C_1044 Methylophaga frappieri CRISPR-associated helicase Cas3, subtype I-F/YPEST YP_006292890.1 1070136 R 754477 CDS YP_006292891.1 387130001 12843382 complement(1073825..1074820) 1 NC_017856.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein Cas1 1074820 12843382 Q7C_1045 Methylophaga frappieri CRISPR-associated protein Cas1 YP_006292891.1 1073825 R 754477 CDS YP_006292892.1 387130002 12843383 complement(1074860..1075078) 1 NC_017856.1 PFAM: HIRAN domain; HIRAN domain-containing protein 1075078 12843383 Q7C_1046 Methylophaga frappieri HIRAN domain-containing protein YP_006292892.1 1074860 R 754477 CDS YP_006292893.1 387130003 12843384 complement(1075234..1076196) 1 NC_017856.1 transcriptional regulator 1076196 12843384 Q7C_1047 Methylophaga frappieri transcriptional regulator YP_006292893.1 1075234 R 754477 CDS YP_006292894.1 387130004 12843385 complement(1076287..1076400) 1 NC_017856.1 hypothetical protein 1076400 12843385 Q7C_1048 Methylophaga frappieri hypothetical protein YP_006292894.1 1076287 R 754477 CDS YP_006292895.1 387130005 12843386 1076358..1077005 1 NC_017856.1 protein containing plastocyanin/azurin family domain 1077005 12843386 Q7C_1049 Methylophaga frappieri protein containing plastocyanin/azurin family domain YP_006292895.1 1076358 D 754477 CDS YP_006292896.1 387130006 12843387 1076986..1079331 1 NC_017856.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1079331 12843387 Q7C_1050 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292896.1 1076986 D 754477 CDS YP_006292897.1 387130007 12843388 1079294..1080124 1 NC_017856.1 PFAM: Protein of unknown function (DUF3034); hypothetical protein 1080124 12843388 Q7C_1051 Methylophaga frappieri hypothetical protein YP_006292897.1 1079294 D 754477 CDS YP_006292898.1 387130008 12843389 1080124..1080543 1 NC_017856.1 PFAM: Bacterial-like globin; Cyanoglobin, Hemoglobin-like protein HbN 1080543 12843389 Q7C_1052 Methylophaga frappieri Cyanoglobin, Hemoglobin-like protein HbN YP_006292898.1 1080124 D 754477 CDS YP_006292899.1 387130009 12843390 complement(1080554..1082299) 1 NC_017856.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; glucose dehydrogenase, PQQ-dependent 1082299 12843390 Q7C_1053 Methylophaga frappieri glucose dehydrogenase, PQQ-dependent YP_006292899.1 1080554 R 754477 CDS YP_006292900.1 387130010 12843391 complement(1082317..1082916) 1 NC_017856.1 PFAM: Isochorismatase family; isochorismatase 1082916 12843391 Q7C_1054 Methylophaga frappieri isochorismatase YP_006292900.1 1082317 R 754477 CDS YP_006292901.1 387130011 12843393 1083922..1085862 1 NC_017856.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; Glucose / Sorbosone dehydrogenase; L-sorbosone dehydrogenase 1085862 12843393 Q7C_1057 Methylophaga frappieri L-sorbosone dehydrogenase YP_006292901.1 1083922 D 754477 CDS YP_006292902.1 387130012 12843394 1085971..1086147 1 NC_017856.1 hypothetical protein 1086147 12843394 Q7C_1058 Methylophaga frappieri hypothetical protein YP_006292902.1 1085971 D 754477 CDS YP_006292903.1 387130013 12843395 complement(1086144..1087670) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1087670 12843395 Q7C_1059 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292903.1 1086144 R 754477 CDS YP_006292904.1 387130014 12843396 complement(1087688..1088941) 1 NC_017856.1 PFAM: EAL domain; EAL-domain associated signalling protein domain; hypothetical protein 1088941 12843396 Q7C_1060 Methylophaga frappieri hypothetical protein YP_006292904.1 1087688 R 754477 CDS YP_006292905.1 387130015 12843397 complement(1088956..1090884) 1 NC_017856.1 PFAM: Protein kinase domain; Stage II sporulation protein E (SpoIIE); Serine/threonine protein kinase 1090884 12843397 Q7C_1061 Methylophaga frappieri Serine/threonine protein kinase YP_006292905.1 1088956 R 754477 CDS YP_006292906.1 387130016 12843398 complement(1090896..1092362) 1 NC_017856.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter 1092362 12843398 Q7C_1062 Methylophaga frappieri nitrate/nitrite transporter YP_006292906.1 1090896 R 754477 CDS YP_006292907.1 387130017 12843399 complement(1092652..1093272) 1 NC_017856.1 PFAM: Response regulator receiver domain; ANTAR domain; Response regulator NasT 1093272 12843399 Q7C_1063 Methylophaga frappieri Response regulator NasT YP_006292907.1 1092652 R 754477 CDS YP_006292908.1 387130018 12843400 complement(1093579..1094820) 1 NC_017856.1 hypothetical protein 1094820 12843400 Q7C_1064 Methylophaga frappieri hypothetical protein YP_006292908.1 1093579 R 754477 CDS YP_006292909.1 387130019 12843401 complement(1094958..1097618) 1 NC_017856.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Assimilatory nitrate reductase large subunit 1097618 12843401 Q7C_1065 Methylophaga frappieri Assimilatory nitrate reductase large subunit YP_006292909.1 1094958 R 754477 CDS YP_006292910.1 387130020 12843402 complement(1097629..1097940) 1 NC_017856.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit 1097940 12843402 Q7C_1066 Methylophaga frappieri nitrite reductase (NAD(P)H) small subunit YP_006292910.1 1097629 R 754477 CDS YP_006292911.1 387130021 12843403 complement(1097940..1100372) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit 1100372 12843403 Q7C_1067 Methylophaga frappieri nitrite reductase (NAD(P)H) large subunit YP_006292911.1 1097940 R 754477 CDS YP_006292912.1 387130022 12843404 complement(1100492..1100638) 1 NC_017856.1 hypothetical protein 1100638 12843404 Q7C_1068 Methylophaga frappieri hypothetical protein YP_006292912.1 1100492 R 754477 CDS YP_006292913.1 387130023 12843405 complement(1100592..1101047) 1 NC_017856.1 TIGRFAM: hypothetical protein; hypothetical protein 1101047 12843405 Q7C_1069 Methylophaga frappieri hypothetical protein YP_006292913.1 1100592 R 754477 CDS YP_006292914.1 387130024 12843406 complement(1101075..1101590) 1 NC_017856.1 PFAM: MarR family; MarR family transcriptional regulator 1101590 12843406 Q7C_1070 Methylophaga frappieri MarR family transcriptional regulator YP_006292914.1 1101075 R 754477 CDS YP_006292915.1 387130025 12843407 1101692..1103104 1 NC_017856.1 PFAM: YcjX-like family, DUF463; ATPase 1103104 12843407 Q7C_1071 Methylophaga frappieri ATPase YP_006292915.1 1101692 D 754477 CDS YP_006292916.1 387130026 12843408 1103101..1104135 1 NC_017856.1 PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein; hypothetical protein 1104135 12843408 Q7C_1072 Methylophaga frappieri hypothetical protein YP_006292916.1 1103101 D 754477 CDS YP_006292917.1 387130027 12843409 complement(1104117..1106771) 1 NC_017856.1 PFAM: GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1106771 12843409 Q7C_1073 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292917.1 1104117 R 754477 CDS YP_006292918.1 387130028 12843410 1106919..1107035 1 NC_017856.1 hypothetical protein 1107035 12843410 Q7C_1074 Methylophaga frappieri hypothetical protein YP_006292918.1 1106919 D 754477 CDS YP_006292919.1 387130029 12843411 complement(1107038..1108024) 1 NC_017856.1 hypothetical protein 1108024 12843411 Q7C_1075 Methylophaga frappieri hypothetical protein YP_006292919.1 1107038 R 754477 CDS YP_006292920.1 387130030 12843412 complement(1108149..1110749) 1 NC_017856.1 hypothetical protein 1110749 12843412 Q7C_1076 Methylophaga frappieri hypothetical protein YP_006292920.1 1108149 R 754477 CDS YP_006292921.1 387130031 12843413 complement(1110815..1111525) 1 NC_017856.1 hypothetical protein 1111525 12843413 Q7C_1077 Methylophaga frappieri hypothetical protein YP_006292921.1 1110815 R 754477 CDS YP_006292922.1 387130032 12843414 1111922..1112185 1 NC_017856.1 hypothetical protein 1112185 12843414 Q7C_1078 Methylophaga frappieri hypothetical protein YP_006292922.1 1111922 D 754477 CDS YP_006292923.1 387130033 12843415 complement(1112166..1112321) 1 NC_017856.1 hypothetical protein 1112321 12843415 Q7C_1079 Methylophaga frappieri hypothetical protein YP_006292923.1 1112166 R 754477 CDS YP_006292924.1 387130034 12843416 complement(1112293..1112985) 1 NC_017856.1 PFAM: Nitroreductase family; nitroreductase 1112985 12843416 Q7C_1080 Methylophaga frappieri nitroreductase YP_006292924.1 1112293 R 754477 CDS YP_006292925.1 387130035 12843417 complement(1113518..1114384) 1 NC_017856.1 PFAM: Putative esterase; hydrolase of the alpha/beta superfamily 1114384 12843417 Q7C_1081 Methylophaga frappieri hydrolase of the alpha/beta superfamily YP_006292925.1 1113518 R 754477 CDS YP_006292926.1 387130036 12843418 complement(1114436..1115056) 1 NC_017856.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenylyl-sulfate reductase 1115056 12843418 Q7C_1082 Methylophaga frappieri phosphoadenylyl-sulfate reductase YP_006292926.1 1114436 R 754477 CDS YP_006292927.1 387130037 12843421 complement(1115789..1116346) 1 NC_017856.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1116346 12843421 Q7C_1085 Methylophaga frappieri CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006292927.1 1115789 R 754477 CDS YP_006292928.1 387130038 12843422 complement(1116396..1118228) 1 NC_017856.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C 1118228 12843422 Q7C_1086 Methylophaga frappieri excinuclease ABC subunit C YP_006292928.1 1116396 R 754477 CDS YP_006292929.1 387130039 12843423 1118220..1118366 1 NC_017856.1 hypothetical protein 1118366 12843423 Q7C_1087 Methylophaga frappieri hypothetical protein YP_006292929.1 1118220 D 754477 CDS YP_006292930.1 387130040 12843424 complement(1118336..1118479) 1 NC_017856.1 hypothetical protein 1118479 12843424 Q7C_1088 Methylophaga frappieri hypothetical protein YP_006292930.1 1118336 R 754477 CDS YP_006292931.1 387130041 12843425 1118560..1122033 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 1122033 12843425 Q7C_1089 Methylophaga frappieri transcription-repair coupling factor YP_006292931.1 1118560 D 754477 CDS YP_006292932.1 387130042 12843426 1122033..1122800 1 NC_017856.1 PFAM: Methyltransferase domain; S-adenosylmethionine-dependent methyltransferase 1122800 12843426 Q7C_1090 Methylophaga frappieri S-adenosylmethionine-dependent methyltransferase YP_006292932.1 1122033 D 754477 CDS YP_006292933.1 387130043 12843427 1122878..1123699 1 NC_017856.1 PFAM: Protein of unknown function (DUF785); hypothetical protein 1123699 12843427 Q7C_1091 Methylophaga frappieri hypothetical protein YP_006292933.1 1122878 D 754477 CDS YP_006292934.1 387130044 12843428 1123719..1125233 1 NC_017856.1 hypothetical protein 1125233 12843428 Q7C_1092 Methylophaga frappieri hypothetical protein YP_006292934.1 1123719 D 754477 CDS YP_006292935.1 387130045 12843429 1125230..1126225 1 NC_017856.1 TIGRFAM: alpha-L-glutamate ligase-related protein; hypothetical protein 1126225 12843429 Q7C_1093 Methylophaga frappieri hypothetical protein YP_006292935.1 1125230 D 754477 CDS YP_006292936.1 387130046 12843430 1126289..1126957 1 NC_017856.1 PFAM: Protein of unknown function (DUF541); hypothetical protein 1126957 12843430 Q7C_1094 Methylophaga frappieri hypothetical protein YP_006292936.1 1126289 D 754477 CDS YP_006292937.1 387130047 12843431 complement(1127035..1128051) 1 NC_017856.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase, Gfo/Idh/MocA family 1128051 12843431 Q7C_1095 Methylophaga frappieri oxidoreductase, Gfo/Idh/MocA family YP_006292937.1 1127035 R 754477 CDS YP_006292938.1 387130048 12843432 1128179..1128691 1 NC_017856.1 PFAM: Redoxin; antioxidant, AhpC/Tsa family 1128691 12843432 Q7C_1096 Methylophaga frappieri antioxidant, AhpC/Tsa family YP_006292938.1 1128179 D 754477 CDS YP_006292939.1 387130049 12843433 complement(1128728..1129423) 1 NC_017856.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); Bacterial regulatory proteins, deoR family; TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 1129423 12843433 Q7C_1097 Methylophaga frappieri ribose 5-phosphate isomerase A YP_006292939.1 1128728 R 754477 CDS YP_006292940.1 387130050 12843434 1129501..1130388 1 NC_017856.1 PFAM: Fructosamine kinase; ribulosamine/erythrulosamine 3-kinase 1130388 12843434 Q7C_1098 Methylophaga frappieri ribulosamine/erythrulosamine 3-kinase YP_006292940.1 1129501 D 754477 CDS YP_006292941.1 387130051 12843435 1130392..1130862 1 NC_017856.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; Low molecular weight protein tyrosine phosphatase 1130862 12843435 Q7C_1099 Methylophaga frappieri Low molecular weight protein tyrosine phosphatase YP_006292941.1 1130392 D 754477 CDS YP_006292942.1 387130052 12843436 1130925..1132409 1 NC_017856.1 PFAM: Citrate transporter; Na+/H+ antiporter NhaD type 1132409 12843436 Q7C_1100 Methylophaga frappieri Na+/H+ antiporter NhaD type YP_006292942.1 1130925 D 754477 CDS YP_006292943.1 387130053 12843437 complement(1132411..1133085) 1 NC_017856.1 PFAM: MaoC like domain; Acyl dehydratase 1133085 12843437 Q7C_1101 Methylophaga frappieri Acyl dehydratase YP_006292943.1 1132411 R 754477 CDS YP_006292944.1 387130054 12843438 1133302..1134363 1 NC_017856.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 1134363 12843438 Q7C_1102 Methylophaga frappieri 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha YP_006292944.1 1133302 D 754477 CDS YP_006292945.1 387130055 12843439 1134569..1135150 1 NC_017856.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; Electron transport complex protein RnfA 1135150 12843439 Q7C_1103 Methylophaga frappieri Electron transport complex protein RnfA YP_006292945.1 1134569 D 754477 CDS YP_006292946.1 387130056 12843440 1135154..1135711 1 NC_017856.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; Electron transport complex protein RnfB 1135711 12843440 Q7C_1104 Methylophaga frappieri Electron transport complex protein RnfB YP_006292946.1 1135154 D 754477 CDS YP_006292947.1 387130057 12843441 1135711..1137249 1 NC_017856.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; Electron transport complex protein RnfC 1137249 12843441 Q7C_1105 Methylophaga frappieri Electron transport complex protein RnfC YP_006292947.1 1135711 D 754477 CDS YP_006292948.1 387130058 12843442 1137246..1138271 1 NC_017856.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; Electron transport complex protein RnfD 1138271 12843442 Q7C_1106 Methylophaga frappieri Electron transport complex protein RnfD YP_006292948.1 1137246 D 754477 CDS YP_006292949.1 387130059 12843443 1138272..1138910 1 NC_017856.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; Electron transport complex protein RnfG 1138910 12843443 Q7C_1107 Methylophaga frappieri Electron transport complex protein RnfG YP_006292949.1 1138272 D 754477 CDS YP_006292950.1 387130060 12843444 1138907..1139596 1 NC_017856.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; Electron transport complex protein RnfE 1139596 12843444 Q7C_1108 Methylophaga frappieri Electron transport complex protein RnfE YP_006292950.1 1138907 D 754477 CDS YP_006292951.1 387130061 12843445 1139593..1140243 1 NC_017856.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; Endonuclease III 1140243 12843445 Q7C_1109 Methylophaga frappieri Endonuclease III YP_006292951.1 1139593 D 754477 CDS YP_006292952.1 387130062 12843446 1140246..1140677 1 NC_017856.1 PFAM: Domain of unknown function (DUF1841); hypothetical protein 1140677 12843446 Q7C_1110 Methylophaga frappieri hypothetical protein YP_006292952.1 1140246 D 754477 CDS YP_006292953.1 387130063 12843447 1140717..1141724 1 NC_017856.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; Similar to arginate lyase; Bifunctional protein: zinc-containing alcohol dehydrogenase, quinone oxidoreductase ( NADPH:quinone reductase) 1141724 12843447 Q7C_1111 Methylophaga frappieri Bifunctional protein: zinc-containing alcohol dehydrogenase, quinone oxidoreductase ( NADPH:quinone reductase) YP_006292953.1 1140717 D 754477 CDS YP_006292954.1 387130064 12843448 1141784..1142272 1 NC_017856.1 Cytochrome c5 1142272 12843448 Q7C_1112 Methylophaga frappieri Cytochrome c5 YP_006292954.1 1141784 D 754477 CDS YP_006292955.1 387130065 12843449 1142374..1145193 1 NC_017856.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B 1145193 12843449 Q7C_1113 Methylophaga frappieri Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B YP_006292955.1 1142374 D 754477 CDS YP_006292956.1 387130066 12843450 1145193..1145573 1 NC_017856.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Na(+) H(+) antiporter subunit C 1145573 12843450 Q7C_1114 Methylophaga frappieri Na(+) H(+) antiporter subunit C YP_006292956.1 1145193 D 754477 CDS YP_006292957.1 387130067 12843451 1145570..1147096 1 NC_017856.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Na(+) H(+) antiporter subunit D 1147096 12843451 Q7C_1115 Methylophaga frappieri Na(+) H(+) antiporter subunit D YP_006292957.1 1145570 D 754477 CDS YP_006292958.1 387130068 12843452 1147201..1147590 1 NC_017856.1 PFAM: Na+/H+ ion antiporter subunit; Na(+) H(+) antiporter subunit E 1147590 12843452 Q7C_1116 Methylophaga frappieri Na(+) H(+) antiporter subunit E YP_006292958.1 1147201 D 754477 CDS YP_006292959.1 387130069 12843453 1147584..1147853 1 NC_017856.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); Na(+) H(+) antiporter subunit F 1147853 12843453 Q7C_1117 Methylophaga frappieri Na(+) H(+) antiporter subunit F YP_006292959.1 1147584 D 754477 CDS YP_006292960.1 387130070 12843454 1147856..1148179 1 NC_017856.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; Na(+) H(+) antiporter subunit G 1148179 12843454 Q7C_1118 Methylophaga frappieri Na(+) H(+) antiporter subunit G YP_006292960.1 1147856 D 754477 CDS YP_006292961.1 387130071 12843455 1148176..1148640 1 NC_017856.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 1148640 12843455 Q7C_1119 Methylophaga frappieri hypothetical protein YP_006292961.1 1148176 D 754477 CDS YP_006292962.1 387130072 12843456 complement(1148956..1149504) 1 NC_017856.1 PFAM: Domain of unkown function (DUF1775); nuclear export factor GLE1 1149504 12843456 Q7C_1120 Methylophaga frappieri nuclear export factor GLE1 YP_006292962.1 1148956 R 754477 CDS YP_006292963.1 387130073 12843457 complement(1149516..1151528) 1 NC_017856.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep 1151528 12843457 Q7C_1121 Methylophaga frappieri ATP-dependent DNA helicase Rep YP_006292963.1 1149516 R 754477 CDS YP_006292964.1 387130074 12843458 complement(1151533..1153035) 1 NC_017856.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; hypothetical protein 1153035 12843458 Q7C_1122 Methylophaga frappieri hypothetical protein YP_006292964.1 1151533 R 754477 CDS YP_006292965.1 387130075 12843459 1153220..1154383 1 NC_017856.1 PFAM: Protein of unknown function, DUF481; salt-induced outer membrane protein 1154383 12843459 Q7C_1123 Methylophaga frappieri salt-induced outer membrane protein YP_006292965.1 1153220 D 754477 CDS YP_006292966.1 387130076 12843460 complement(1154675..1154989) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1255); hypothetical protein 1154989 12843460 Q7C_1124 Methylophaga frappieri hypothetical protein YP_006292966.1 1154675 R 754477 CDS YP_006292967.1 387130077 12843461 complement(1155045..1155743) 1 NC_017856.1 hypothetical protein 1155743 12843461 Q7C_1125 Methylophaga frappieri hypothetical protein YP_006292967.1 1155045 R 754477 CDS YP_006292968.1 387130078 12843462 complement(1155766..1156020) 1 NC_017856.1 PFAM: Protein of unknown function (DUF526); hypothetical protein 1156020 12843462 Q7C_1126 Methylophaga frappieri hypothetical protein YP_006292968.1 1155766 R 754477 CDS YP_006292969.1 387130079 12843463 1156145..1156570 1 NC_017856.1 PFAM: Protein of unknown function (DUF1043); hypothetical protein 1156570 12843463 Q7C_1127 Methylophaga frappieri hypothetical protein YP_006292969.1 1156145 D 754477 CDS YP_006292970.1 387130080 12843464 complement(1156572..1158026) 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF853); ATPase 1158026 12843464 Q7C_1128 Methylophaga frappieri ATPase YP_006292970.1 1156572 R 754477 CDS YP_006292971.1 387130081 12843465 complement(1158129..1159064) 1 NC_017856.1 hypothetical protein 1159064 12843465 Q7C_1129 Methylophaga frappieri hypothetical protein YP_006292971.1 1158129 R 754477 CDS YP_006292972.1 387130082 12843466 complement(1159162..1159989) 1 NC_017856.1 PFAM: Leucine carboxyl methyltransferase; Phosphoribosylamine--glycine ligase 1159989 12843466 Q7C_1130 Methylophaga frappieri Phosphoribosylamine--glycine ligase YP_006292972.1 1159162 R 754477 CDS YP_006292973.1 387130083 12843467 1160122..1160532 1 NC_017856.1 hypothetical protein 1160532 12843467 Q7C_1131 Methylophaga frappieri hypothetical protein YP_006292973.1 1160122 D 754477 CDS YP_006292974.1 387130084 12843468 complement(1160601..1162340) 1 NC_017856.1 PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 1162340 12843468 Q7C_1132 Methylophaga frappieri exodeoxyribonuclease V subunit alpha YP_006292974.1 1160601 R 754477 CDS YP_006292975.1 387130085 12843469 complement(1162333..1165824) 1 NC_017856.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1165824 12843469 Q7C_1133 Methylophaga frappieri exodeoxyribonuclease V subunit beta YP_006292975.1 1162333 R 754477 CDS YP_006292976.1 387130086 12843470 complement(1165821..1169033) 1 NC_017856.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 1169033 12843470 Q7C_1134 Methylophaga frappieri exodeoxyribonuclease V subunit gamma YP_006292976.1 1165821 R 754477 CDS YP_006292977.1 387130087 12842380 1169264..1169725 1 NC_017856.1 hypothetical protein 1169725 12842380 Q7C_1135 Methylophaga frappieri hypothetical protein YP_006292977.1 1169264 D 754477 CDS YP_006292978.1 387130088 12842381 1169735..1169893 1 NC_017856.1 PFAM: Uncharacterized protein family UPF0057; Stress induced hydrophobic peptide 1169893 12842381 Q7C_1136 Methylophaga frappieri Stress induced hydrophobic peptide YP_006292978.1 1169735 D 754477 CDS YP_006292979.1 387130089 12842382 complement(1169944..1170486) 1 NC_017856.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome B561 1170486 12842382 Q7C_1137 Methylophaga frappieri Cytochrome B561 YP_006292979.1 1169944 R 754477 CDS YP_006292980.1 387130090 12842383 complement(1170535..1171089) 1 NC_017856.1 hypothetical protein 1171089 12842383 Q7C_1138 Methylophaga frappieri hypothetical protein YP_006292980.1 1170535 R 754477 CDS YP_006292981.1 387130091 12842384 complement(1171508..1172779) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Sulfide-quinone reductase 1172779 12842384 Q7C_1139 Methylophaga frappieri Sulfide-quinone reductase YP_006292981.1 1171508 R 754477 CDS YP_006292982.1 387130092 12842385 complement(1172786..1173682) 1 NC_017856.1 PFAM: Hsp33 protein; 33 kDa chaperonin 1173682 12842385 Q7C_1140 Methylophaga frappieri 33 kDa chaperonin YP_006292982.1 1172786 R 754477 CDS YP_006292983.1 387130093 12842386 complement(1173790..1175697) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; Chaperone protein HtpG 1175697 12842386 Q7C_1141 Methylophaga frappieri Chaperone protein HtpG YP_006292983.1 1173790 R 754477 CDS YP_006292984.1 387130094 12842387 1175678..1175800 1 NC_017856.1 hypothetical protein 1175800 12842387 Q7C_1142 Methylophaga frappieri hypothetical protein YP_006292984.1 1175678 D 754477 CDS YP_006292985.1 387130095 12842388 1176014..1176418 1 NC_017856.1 PFAM: Protein of unknown function (DUF785); hypothetical protein 1176418 12842388 Q7C_1143 Methylophaga frappieri hypothetical protein YP_006292985.1 1176014 D 754477 CDS YP_006292986.1 387130096 12842389 complement(1176473..1176613) 1 NC_017856.1 hypothetical protein 1176613 12842389 Q7C_1144 Methylophaga frappieri hypothetical protein YP_006292986.1 1176473 R 754477 CDS YP_006292987.1 387130097 12842390 1176617..1177285 1 NC_017856.1 PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase family protein 1177285 12842390 Q7C_1145 Methylophaga frappieri endonuclease/exonuclease/phosphatase family protein YP_006292987.1 1176617 D 754477 CDS YP_006292988.1 387130098 12842391 complement(1177282..1178070) 1 NC_017856.1 TIGRFAM: methyltransferase, FkbM family; hypothetical protein 1178070 12842391 Q7C_1146 Methylophaga frappieri hypothetical protein YP_006292988.1 1177282 R 754477 CDS YP_006292989.1 387130099 12842392 complement(1178170..1178868) 1 NC_017856.1 PFAM: Glutamine amidotransferase class-I; glutamine amidotransferase 1178868 12842392 Q7C_1147 Methylophaga frappieri glutamine amidotransferase YP_006292989.1 1178170 R 754477 CDS YP_006292990.1 387130100 12842393 1178986..1179135 1 NC_017856.1 PFAM: Protein of unknown function (DUF3096); hypothetical protein 1179135 12842393 Q7C_1148 Methylophaga frappieri hypothetical protein YP_006292990.1 1178986 D 754477 CDS YP_006292991.1 387130101 12842394 complement(1179175..1179300) 1 NC_017856.1 hypothetical protein 1179300 12842394 Q7C_1149 Methylophaga frappieri hypothetical protein YP_006292991.1 1179175 R 754477 CDS YP_006292992.1 387130102 12842395 1179299..1179439 1 NC_017856.1 hypothetical protein 1179439 12842395 Q7C_1150 Methylophaga frappieri hypothetical protein YP_006292992.1 1179299 D 754477 CDS YP_006292993.1 387130103 12842396 complement(1179494..1179892) 1 NC_017856.1 PFAM: AIG2-like family; hypothetical protein 1179892 12842396 Q7C_1151 Methylophaga frappieri hypothetical protein YP_006292993.1 1179494 R 754477 CDS YP_006292994.1 387130104 12842397 1179951..1180865 1 NC_017856.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl-Q-tRNA synthetase 1180865 12842397 Q7C_1152 Methylophaga frappieri glutamyl-Q-tRNA synthetase YP_006292994.1 1179951 D 754477 CDS YP_006292995.1 387130105 12842398 1180951..1182486 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; carbon-nitrogen hydrolase 1182486 12842398 Q7C_1153 Methylophaga frappieri carbon-nitrogen hydrolase YP_006292995.1 1180951 D 754477 CDS YP_006292996.1 387130106 12842399 complement(1182531..1183880) 1 NC_017856.1 PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1183880 12842399 Q7C_1154 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006292996.1 1182531 R 754477 CDS YP_006292997.1 387130107 12842400 complement(1183977..1184750) 1 NC_017856.1 PFAM: Protein of unknown function (DUF328); hypothetical protein 1184750 12842400 Q7C_1155 Methylophaga frappieri hypothetical protein YP_006292997.1 1183977 R 754477 CDS YP_006292998.1 387130108 12842401 complement(1184789..1185091) 1 NC_017856.1 glucose-1-phosphate thymidylyltransferase, long form 1185091 12842401 Q7C_1156 Methylophaga frappieri glucose-1-phosphate thymidylyltransferase, long form YP_006292998.1 1184789 R 754477 CDS YP_006292999.1 387130109 12842402 1185284..1185808 1 NC_017856.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; TRAP-type mannitol/chloroaromatic compound transport system, small permease component 1185808 12842402 Q7C_1157 Methylophaga frappieri TRAP-type mannitol/chloroaromatic compound transport system, small permease component YP_006292999.1 1185284 D 754477 CDS YP_006293000.1 387130110 12842403 1185808..1187115 1 NC_017856.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 1187115 12842403 Q7C_1158 Methylophaga frappieri TRAP C4-dicarboxylate transport system permease DctM YP_006293000.1 1185808 D 754477 CDS YP_006293001.1 387130111 12842404 complement(1187117..1188082) 1 NC_017856.1 PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX; translation elongation factor P Lys34:lysine transferase 1188082 12842404 Q7C_1159 Methylophaga frappieri translation elongation factor P Lys34:lysine transferase YP_006293001.1 1187117 R 754477 CDS YP_006293002.1 387130112 12842405 complement(1188155..1188724) 1 NC_017856.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P 1188724 12842405 Q7C_1160 Methylophaga frappieri translation elongation factor P YP_006293002.1 1188155 R 754477 CDS YP_006293003.1 387130113 12842406 1188778..1189785 1 NC_017856.1 TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein; Lysyl-lysine 2,3-aminomutase 1189785 12842406 Q7C_1161 Methylophaga frappieri Lysyl-lysine 2,3-aminomutase YP_006293003.1 1188778 D 754477 CDS YP_006293004.1 387130114 12842407 complement(1189791..1190954) 1 NC_017856.1 PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Citrate synthase (si) 1190954 12842407 Q7C_1162 Methylophaga frappieri Citrate synthase (si) YP_006293004.1 1189791 R 754477 CDS YP_006293005.1 387130115 12842408 complement(1191051..1192328) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit 1192328 12842408 Q7C_1163 Methylophaga frappieri sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit YP_006293005.1 1191051 R 754477 CDS YP_006293006.1 387130116 12842409 complement(1192578..1193315) 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; NDP-hexose 4-ketoreductase UrdR 1193315 12842409 Q7C_1164 Methylophaga frappieri NDP-hexose 4-ketoreductase UrdR YP_006293006.1 1192578 R 754477 CDS YP_006293007.1 387130117 12842410 complement(1193687..1195726) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1195726 12842410 Q7C_1165 Methylophaga frappieri TonB-dependent receptor YP_006293007.1 1193687 R 754477 CDS YP_006293008.1 387130118 12842411 1196306..1198486 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins 1198486 12842411 Q7C_1166 Methylophaga frappieri TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins YP_006293008.1 1196306 D 754477 CDS YP_006293009.1 387130119 12842412 complement(1198735..1199688) 1 NC_017856.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; Lipoate synthase 1199688 12842412 Q7C_1167 Methylophaga frappieri Lipoate synthase YP_006293009.1 1198735 R 754477 CDS YP_006293010.1 387130120 12842413 complement(1199685..1200296) 1 NC_017856.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase 1200296 12842413 Q7C_1168 Methylophaga frappieri Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase YP_006293010.1 1199685 R 754477 CDS YP_006293011.1 387130121 12842414 complement(1200296..1200571) 1 NC_017856.1 PFAM: Protein of unknown function (DUF493); lipoate regulatory protein YbeD 1200571 12842414 Q7C_1169 Methylophaga frappieri lipoate regulatory protein YbeD YP_006293011.1 1200296 R 754477 CDS YP_006293012.1 387130122 12842415 complement(1200568..1201419) 1 NC_017856.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; D-alanine aminotransferase 1201419 12842415 Q7C_1170 Methylophaga frappieri D-alanine aminotransferase YP_006293012.1 1200568 R 754477 CDS YP_006293013.1 387130123 12842416 complement(1201423..1202562) 1 NC_017856.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 1202562 12842416 Q7C_1171 Methylophaga frappieri D-alanyl-D-alanine carboxypeptidase YP_006293013.1 1201423 R 754477 CDS YP_006293014.1 387130124 12842417 complement(1202601..1203449) 1 NC_017856.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; Rare lipoprotein A 1203449 12842417 Q7C_1172 Methylophaga frappieri Rare lipoprotein A YP_006293014.1 1202601 R 754477 CDS YP_006293015.1 387130125 12842418 complement(1203449..1204429) 1 NC_017856.1 TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase; Membrane-bound lytic murein transglycosylase B precursor 1204429 12842418 Q7C_1173 Methylophaga frappieri Membrane-bound lytic murein transglycosylase B precursor YP_006293015.1 1203449 R 754477 CDS YP_006293016.1 387130126 12842419 complement(1204426..1205556) 1 NC_017856.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Rod shape-determining protein RodA 1205556 12842419 Q7C_1174 Methylophaga frappieri Rod shape-determining protein RodA YP_006293016.1 1204426 R 754477 CDS YP_006293017.1 387130127 12842420 complement(1205549..1207465) 1 NC_017856.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; Penicillin-binding protein 2 (PBP-2) 1207465 12842420 Q7C_1175 Methylophaga frappieri Penicillin-binding protein 2 (PBP-2) YP_006293017.1 1205549 R 754477 CDS YP_006293018.1 387130128 12842421 complement(1207465..1207944) 1 NC_017856.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; Rod shape-determining protein MreD 1207944 12842421 Q7C_1176 Methylophaga frappieri Rod shape-determining protein MreD YP_006293018.1 1207465 R 754477 CDS YP_006293019.1 387130129 12842422 complement(1207931..1208887) 1 NC_017856.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; Rod shape-determining protein MreC 1208887 12842422 Q7C_1177 Methylophaga frappieri Rod shape-determining protein MreC YP_006293019.1 1207931 R 754477 CDS YP_006293020.1 387130130 12842423 complement(1209009..1210055) 1 NC_017856.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; Rod shape-determining protein MreB 1210055 12842423 Q7C_1178 Methylophaga frappieri Rod shape-determining protein MreB YP_006293020.1 1209009 R 754477 CDS YP_006293021.1 387130131 12842424 1210178..1210465 1 NC_017856.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C 1210465 12842424 Q7C_1179 Methylophaga frappieri Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C YP_006293021.1 1210178 D 754477 CDS YP_006293022.1 387130132 12842425 1210484..1211938 1 NC_017856.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A 1211938 12842425 Q7C_1180 Methylophaga frappieri Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A YP_006293022.1 1210484 D 754477 CDS YP_006293023.1 387130133 12842427 1213028..1214659 1 NC_017856.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; hypothetical protein 1214659 12842427 Q7C_1183 Methylophaga frappieri hypothetical protein YP_006293023.1 1213028 D 754477 CDS YP_006293024.1 387130134 12842428 1214663..1215160 1 NC_017856.1 PFAM: AhpC/TSA family; Cytochrome c-type biogenesis protein ResA 1215160 12842428 Q7C_1184 Methylophaga frappieri Cytochrome c-type biogenesis protein ResA YP_006293024.1 1214663 D 754477 CDS YP_006293025.1 387130135 12842429 1215276..1215512 1 NC_017856.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 1215512 12842429 Q7C_1185 Methylophaga frappieri 50S ribosomal protein L28 YP_006293025.1 1215276 D 754477 CDS YP_006293026.1 387130136 12842430 1215526..1215681 1 NC_017856.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 1215681 12842430 Q7C_1186 Methylophaga frappieri 50S ribosomal protein L33 YP_006293026.1 1215526 D 754477 CDS YP_006293027.1 387130137 12842431 1215788..1216999 1 NC_017856.1 PFAM: EAL domain; HDOD domain; signal transduction protein 1216999 12842431 Q7C_1187 Methylophaga frappieri signal transduction protein YP_006293027.1 1215788 D 754477 CDS YP_006293028.1 387130138 12842432 1217001..1217948 1 NC_017856.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 1217948 12842432 Q7C_1188 Methylophaga frappieri multidrug ABC transporter ATPase YP_006293028.1 1217001 D 754477 CDS YP_006293029.1 387130139 12842433 1217948..1218697 1 NC_017856.1 ABC transporter permease 1218697 12842433 Q7C_1189 Methylophaga frappieri ABC transporter permease YP_006293029.1 1217948 D 754477 CDS YP_006293030.1 387130140 12842434 1218694..1220043 1 NC_017856.1 PFAM: ABC-type uncharacterized transport system; Mucin 2 1220043 12842434 Q7C_1190 Methylophaga frappieri Mucin 2 YP_006293030.1 1218694 D 754477 CDS YP_006293031.1 387130141 12842435 1220040..1220915 1 NC_017856.1 hypothetical protein 1220915 12842435 Q7C_1191 Methylophaga frappieri hypothetical protein YP_006293031.1 1220040 D 754477 CDS YP_006293032.1 387130142 12842436 1220915..1221733 1 NC_017856.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase 1221733 12842436 Q7C_1192 Methylophaga frappieri formamidopyrimidine-DNA glycosylase YP_006293032.1 1220915 D 754477 CDS YP_006293033.1 387130143 12842437 complement(1221762..1222043) 1 NC_017856.1 PFAM: Cytochrome c; cytochrome c553 1222043 12842437 Q7C_1193 Methylophaga frappieri cytochrome c553 YP_006293033.1 1221762 R 754477 CDS YP_006293034.1 387130144 12842438 1222119..1223096 1 NC_017856.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; Ribosomal large subunit pseudouridine synthase D 1223096 12842438 Q7C_1194 Methylophaga frappieri Ribosomal large subunit pseudouridine synthase D YP_006293034.1 1222119 D 754477 CDS YP_006293035.1 387130145 12842439 complement(1223165..1225258) 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G-like protein 1225258 12842439 Q7C_1195 Methylophaga frappieri translation elongation factor G-like protein YP_006293035.1 1223165 R 754477 CDS YP_006293036.1 387130146 12842440 complement(1225455..1225760) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2818); hypothetical protein 1225760 12842440 Q7C_1196 Methylophaga frappieri hypothetical protein YP_006293036.1 1225455 R 754477 CDS YP_006293037.1 387130147 12842441 complement(1225767..1227200) 1 NC_017856.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH-ubiquinone oxidoreductase subunit N 1227200 12842441 Q7C_1197 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit N YP_006293037.1 1225767 R 754477 CDS YP_006293038.1 387130148 12842443 complement(1228744..1230681) 1 NC_017856.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH-ubiquinone oxidoreductase subunit L 1230681 12842443 Q7C_1200 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit L YP_006293038.1 1228744 R 754477 CDS YP_006293039.1 387130149 12842444 complement(1230685..1230990) 1 NC_017856.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit K 1230990 12842444 Q7C_1201 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit K YP_006293039.1 1230685 R 754477 CDS YP_006293040.1 387130150 12842445 complement(1230990..1231598) 1 NC_017856.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone oxidoreductase subunit J 1231598 12842445 Q7C_1202 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit J YP_006293040.1 1230990 R 754477 CDS YP_006293041.1 387130151 12842446 complement(1231608..1232099) 1 NC_017856.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-ubiquinone oxidoreductase subunit I 1232099 12842446 Q7C_1203 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit I YP_006293041.1 1231608 R 754477 CDS YP_006293042.1 387130152 12842447 complement(1232096..1233151) 1 NC_017856.1 PFAM: NADH dehydrogenase; NADH-ubiquinone oxidoreductase subunit H 1233151 12842447 Q7C_1204 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit H YP_006293042.1 1232096 R 754477 CDS YP_006293043.1 387130153 12842448 complement(1233144..1235498) 1 NC_017856.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G; NADH-ubiquinone oxidoreductase subunit G 1235498 12842448 Q7C_1205 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit G YP_006293043.1 1233144 R 754477 CDS YP_006293044.1 387130154 12842449 complement(1235491..1236795) 1 NC_017856.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH-ubiquinone oxidoreductase subunit F 1236795 12842449 Q7C_1206 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit F YP_006293044.1 1235491 R 754477 CDS YP_006293045.1 387130155 12842450 complement(1236795..1237304) 1 NC_017856.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-ubiquinone oxidoreductase subunit E 1237304 12842450 Q7C_1207 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit E YP_006293045.1 1236795 R 754477 CDS YP_006293046.1 387130156 12842451 complement(1237301..1238554) 1 NC_017856.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH-ubiquinone oxidoreductase subunit D 1238554 12842451 Q7C_1208 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit D YP_006293046.1 1237301 R 754477 CDS YP_006293047.1 387130157 12842452 complement(1238554..1239213) 1 NC_017856.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH-ubiquinone oxidoreductase subunit C 1239213 12842452 Q7C_1209 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit C YP_006293047.1 1238554 R 754477 CDS YP_006293048.1 387130158 12842453 complement(1239210..1239701) 1 NC_017856.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-ubiquinone oxidoreductase subunit B 1239701 12842453 Q7C_1210 Methylophaga frappieri NADH-ubiquinone oxidoreductase subunit B YP_006293048.1 1239210 R 754477 CDS YP_006293049.1 387130159 12842454 complement(1239692..1240060) 1 NC_017856.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH ubiquinone oxidoreductase subunit A 1240060 12842454 Q7C_1211 Methylophaga frappieri NADH ubiquinone oxidoreductase subunit A YP_006293049.1 1239692 R 754477 CDS YP_006293050.1 387130160 12842455 1240428..1241306 1 NC_017856.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein; protein rarD 1241306 12842455 Q7C_1212 Methylophaga frappieri protein rarD YP_006293050.1 1240428 D 754477 CDS YP_006293051.1 387130161 12842457 complement(1241448..1241780) 1 NC_017856.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; TC 3.A.5.1.1; preprotein translocase subunit SecG 1241780 12842457 Q7C_1214 Methylophaga frappieri preprotein translocase subunit SecG YP_006293051.1 1241448 R 754477 CDS YP_006293052.1 387130162 12842458 complement(1241789..1242568) 1 NC_017856.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 1242568 12842458 Q7C_1215 Methylophaga frappieri triosephosphate isomerase YP_006293052.1 1241789 R 754477 CDS YP_006293053.1 387130163 12842459 complement(1242610..1243968) 1 NC_017856.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase 1243968 12842459 Q7C_1216 Methylophaga frappieri phosphoglucosamine mutase YP_006293053.1 1242610 R 754477 CDS YP_006293054.1 387130164 12842460 complement(1243961..1244749) 1 NC_017856.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; Dihydropteroate synthase 1244749 12842460 Q7C_1217 Methylophaga frappieri Dihydropteroate synthase YP_006293054.1 1243961 R 754477 CDS YP_006293055.1 387130165 12842461 complement(1244810..1246705) 1 NC_017856.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; Cell division protein FtsH 1246705 12842461 Q7C_1218 Methylophaga frappieri Cell division protein FtsH YP_006293055.1 1244810 R 754477 CDS YP_006293056.1 387130166 12842462 complement(1246751..1247368) 1 NC_017856.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J 1247368 12842462 Q7C_1219 Methylophaga frappieri Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J YP_006293056.1 1246751 R 754477 CDS YP_006293057.1 387130167 12842463 complement(1247355..1247573) 1 NC_017856.1 hypothetical protein 1247573 12842463 Q7C_1220 Methylophaga frappieri hypothetical protein YP_006293057.1 1247355 R 754477 CDS YP_006293058.1 387130168 12842464 complement(1247834..1248310) 1 NC_017856.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA 1248310 12842464 Q7C_1221 Methylophaga frappieri transcription elongation factor GreA YP_006293058.1 1247834 R 754477 CDS YP_006293059.1 387130169 12842465 complement(1248310..1251528) 1 NC_017856.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 1251528 12842465 Q7C_1222 Methylophaga frappieri carbamoyl-phosphate synthase large subunit YP_006293059.1 1248310 R 754477 CDS YP_006293060.1 387130170 12842466 complement(1251535..1252665) 1 NC_017856.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 1252665 12842466 Q7C_1223 Methylophaga frappieri carbamoyl-phosphate synthase small subunit YP_006293060.1 1251535 R 754477 CDS YP_006293061.1 387130171 12842467 1252833..1253852 1 NC_017856.1 PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 1253852 12842467 Q7C_1224 Methylophaga frappieri porphobilinogen synthase YP_006293061.1 1252833 D 754477 CDS YP_006293062.1 387130172 12842468 1253845..1254660 1 NC_017856.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1254660 12842468 Q7C_1225 Methylophaga frappieri shikimate 5-dehydrogenase YP_006293062.1 1253845 D 754477 CDS YP_006293063.1 387130173 12842469 complement(1254702..1255175) 1 NC_017856.1 PFAM: LTXXQ motif; LTXXQ motif protein 1255175 12842469 Q7C_1226 Methylophaga frappieri LTXXQ motif protein YP_006293063.1 1254702 R 754477 CDS YP_006293064.1 387130174 12842470 1255367..1256044 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 1256044 12842470 Q7C_1227 Methylophaga frappieri Copper-sensing two-component system response regulator CpxR YP_006293064.1 1255367 D 754477 CDS YP_006293065.1 387130175 12842471 1256054..1257421 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; hypothetical protein 1257421 12842471 Q7C_1228 Methylophaga frappieri hypothetical protein YP_006293065.1 1256054 D 754477 CDS YP_006293066.1 387130176 12842472 complement(1257658..1260819) 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 1260819 12842472 Q7C_1229 Methylophaga frappieri RND efflux system, inner membrane transporter CmeB YP_006293066.1 1257658 R 754477 CDS YP_006293067.1 387130177 12842473 complement(1260819..1261967) 1 NC_017856.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein 1261967 12842473 Q7C_1230 Methylophaga frappieri Co/Zn/Cd efflux system membrane fusion protein YP_006293067.1 1260819 R 754477 CDS YP_006293068.1 387130178 12842474 1262098..1262598 1 NC_017856.1 MarR family transcriptional regulator 1262598 12842474 Q7C_1231 Methylophaga frappieri MarR family transcriptional regulator YP_006293068.1 1262098 D 754477 CDS YP_006293069.1 387130179 12842475 complement(1262826..1263131) 1 NC_017856.1 PFAM: Cell division protein ZapA; Z-ring-associated protein ZapA 1263131 12842475 Q7C_1232 Methylophaga frappieri Z-ring-associated protein ZapA YP_006293069.1 1262826 R 754477 CDS YP_006293070.1 387130180 12842476 complement(1263128..1263337) 1 NC_017856.1 TIGRFAM: TIGR02449 family protein; hypothetical protein 1263337 12842476 Q7C_1233 Methylophaga frappieri hypothetical protein YP_006293070.1 1263128 R 754477 CDS YP_006293071.1 387130181 12842477 1263545..1263991 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0149); hypothetical protein 1263991 12842477 Q7C_1234 Methylophaga frappieri hypothetical protein YP_006293071.1 1263545 D 754477 CDS YP_006293072.1 387130182 12842478 1263991..1265301 1 NC_017856.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Xaa-Pro aminopeptidase 1265301 12842478 Q7C_1235 Methylophaga frappieri Xaa-Pro aminopeptidase YP_006293072.1 1263991 D 754477 CDS YP_006293073.1 387130183 12842479 1265307..1266509 1 NC_017856.1 PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenol hydroxylase 1266509 12842479 Q7C_1236 Methylophaga frappieri 2-octaprenyl-6-methoxyphenol hydroxylase YP_006293073.1 1265307 D 754477 CDS YP_006293074.1 387130184 12842480 1266509..1267684 1 NC_017856.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1267684 12842480 Q7C_1237 Methylophaga frappieri 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_006293074.1 1266509 D 754477 CDS YP_006293075.1 387130185 12842481 complement(1267673..1268350) 1 NC_017856.1 lipoprotein 1268350 12842481 Q7C_1238 Methylophaga frappieri lipoprotein YP_006293075.1 1267673 R 754477 CDS YP_006293076.1 387130186 12842482 complement(1268337..1268657) 1 NC_017856.1 hypothetical protein 1268657 12842482 Q7C_1239 Methylophaga frappieri hypothetical protein YP_006293076.1 1268337 R 754477 CDS YP_006293077.1 387130187 12842483 complement(1268641..1270029) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase RhlB 1270029 12842483 Q7C_1240 Methylophaga frappieri ATP-dependent RNA helicase RhlB YP_006293077.1 1268641 R 754477 CDS YP_006293078.1 387130188 12842484 1270052..1270378 1 NC_017856.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; Thioredoxin 1270378 12842484 Q7C_1241 Methylophaga frappieri Thioredoxin YP_006293078.1 1270052 D 754477 CDS YP_006293079.1 387130189 12842485 1270478..1272634 1 NC_017856.1 PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; ATP-dependent DNA helicase UvrD/PcrA 1272634 12842485 Q7C_1242 Methylophaga frappieri ATP-dependent DNA helicase UvrD/PcrA YP_006293079.1 1270478 D 754477 CDS YP_006293080.1 387130190 12842486 1272652..1273746 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 1273746 12842486 Q7C_1243 Methylophaga frappieri TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component YP_006293080.1 1272652 D 754477 CDS YP_006293081.1 387130191 12842487 1273743..1273991 1 NC_017856.1 hypothetical protein 1273991 12842487 Q7C_1244 Methylophaga frappieri hypothetical protein YP_006293081.1 1273743 D 754477 CDS YP_006293082.1 387130192 12842488 1273969..1274502 1 NC_017856.1 PFAM: Protein of unknown function, DUF; copper amine oxidase N-terminal protein 1274502 12842488 Q7C_1245 Methylophaga frappieri copper amine oxidase N-terminal protein YP_006293082.1 1273969 D 754477 CDS YP_006293083.1 387130193 12842489 1274533..1275375 1 NC_017856.1 PFAM: EamA-like transporter family; drug/metabolite transporter (DMT) superfamily permease 1275375 12842489 Q7C_1246 Methylophaga frappieri drug/metabolite transporter (DMT) superfamily permease YP_006293083.1 1274533 D 754477 CDS YP_006293084.1 387130194 12842490 1275427..1276659 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase SrmB 1276659 12842490 Q7C_1247 Methylophaga frappieri ATP-dependent RNA helicase SrmB YP_006293084.1 1275427 D 754477 CDS YP_006293085.1 387130195 12842491 complement(1276709..1279543) 1 NC_017856.1 PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1279543 12842491 Q7C_1248 Methylophaga frappieri phosphoenolpyruvate carboxylase YP_006293085.1 1276709 R 754477 CDS YP_006293086.1 387130196 12842492 complement(1279558..1281012) 1 NC_017856.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen synthase 1281012 12842492 Q7C_1249 Methylophaga frappieri glycogen synthase YP_006293086.1 1279558 R 754477 CDS YP_006293087.1 387130197 12842493 1281089..1282558 1 NC_017856.1 PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1282558 12842493 Q7C_1250 Methylophaga frappieri glucose-6-phosphate 1-dehydrogenase YP_006293087.1 1281089 D 754477 CDS YP_006293088.1 387130198 12842494 complement(1282613..1283515) 1 NC_017856.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase 1283515 12842494 Q7C_1251 Methylophaga frappieri phosphatidylserine decarboxylase YP_006293088.1 1282613 R 754477 CDS YP_006293089.1 387130199 12842495 1283578..1283979 1 NC_017856.1 PFAM: Flagellar basal body-associated protein FliL; flagellar protein 1283979 12842495 Q7C_1252 Methylophaga frappieri flagellar protein YP_006293089.1 1283578 D 754477 CDS YP_006293090.1 387130200 12842496 1284028..1284534 1 NC_017856.1 PFAM: Flagellar basal body-associated protein FliL; flagellar biosynthesis protein FliL 1284534 12842496 Q7C_1253 Methylophaga frappieri flagellar biosynthesis protein FliL YP_006293090.1 1284028 D 754477 CDS YP_006293091.1 387130201 12842497 1284536..1285558 1 NC_017856.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 1285558 12842497 Q7C_1254 Methylophaga frappieri flagellar motor switch protein FliM YP_006293091.1 1284536 D 754477 CDS YP_006293092.1 387130202 12842498 1285555..1286016 1 NC_017856.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein FliN 1286016 12842498 Q7C_1255 Methylophaga frappieri flagellar motor switch protein FliN YP_006293092.1 1285555 D 754477 CDS YP_006293093.1 387130203 12842499 1286037..1286429 1 NC_017856.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biosynthesis protein FliO 1286429 12842499 Q7C_1256 Methylophaga frappieri flagellar biosynthesis protein FliO YP_006293093.1 1286037 D 754477 CDS YP_006293094.1 387130204 12842500 1286426..1287163 1 NC_017856.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthesis protein FliP 1287163 12842500 Q7C_1257 Methylophaga frappieri flagellar biosynthesis protein FliP YP_006293094.1 1286426 D 754477 CDS YP_006293095.1 387130205 12842501 1287168..1287437 1 NC_017856.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthesis protein FliQ 1287437 12842501 Q7C_1258 Methylophaga frappieri flagellar biosynthesis protein FliQ YP_006293095.1 1287168 D 754477 CDS YP_006293096.1 387130206 12842502 1287485..1288219 1 NC_017856.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthesis protein FliR 1288219 12842502 Q7C_1259 Methylophaga frappieri flagellar biosynthesis protein FliR YP_006293096.1 1287485 D 754477 CDS YP_006293097.1 387130207 12842503 1288212..1289351 1 NC_017856.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthesis protein FlhB 1289351 12842503 Q7C_1260 Methylophaga frappieri flagellar biosynthesis protein FlhB YP_006293097.1 1288212 D 754477 CDS YP_006293098.1 387130208 12842504 1289370..1291436 1 NC_017856.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 1291436 12842504 Q7C_1261 Methylophaga frappieri flagellar biosynthesis protein FlhA YP_006293098.1 1289370 D 754477 CDS YP_006293099.1 387130209 12842505 1291451..1292644 1 NC_017856.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthesis protein FlhF 1292644 12842505 Q7C_1262 Methylophaga frappieri flagellar biosynthesis protein FlhF YP_006293099.1 1291451 D 754477 CDS YP_006293100.1 387130210 12842506 1292637..1293515 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; flagellar synthesis regulator FleN 1293515 12842506 Q7C_1263 Methylophaga frappieri flagellar synthesis regulator FleN YP_006293100.1 1292637 D 754477 CDS YP_006293101.1 387130211 12842507 1293512..1294237 1 NC_017856.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor for flagellar operon 1294237 12842507 Q7C_1264 Methylophaga frappieri RNA polymerase sigma factor for flagellar operon YP_006293101.1 1293512 D 754477 CDS YP_006293102.1 387130212 12842508 1294266..1294643 1 NC_017856.1 PFAM: Response regulator receiver domain; chemotaxis regulator 1294643 12842508 Q7C_1265 Methylophaga frappieri chemotaxis regulator YP_006293102.1 1294266 D 754477 CDS YP_006293103.1 387130213 12842509 1294664..1295389 1 NC_017856.1 PFAM: Chemotaxis phosphatase, CheZ; Chemotaxis response - phosphatase CheZ 1295389 12842509 Q7C_1266 Methylophaga frappieri Chemotaxis response - phosphatase CheZ YP_006293103.1 1294664 D 754477 CDS YP_006293104.1 387130214 12842510 1295401..1297353 1 NC_017856.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 1297353 12842510 Q7C_1267 Methylophaga frappieri signal transduction histidine kinase YP_006293104.1 1295401 D 754477 CDS YP_006293105.1 387130215 12842511 1297362..1298387 1 NC_017856.1 PFAM: CheB methylesterase; Response regulator receiver domain; Chemotaxis response regulator protein-glutamate methylesterase CheB 1298387 12842511 Q7C_1268 Methylophaga frappieri Chemotaxis response regulator protein-glutamate methylesterase CheB YP_006293105.1 1297362 D 754477 CDS YP_006293106.1 387130216 12842512 1298390..1299130 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 1299130 12842512 Q7C_1269 Methylophaga frappieri flagellar motor rotation protein MotA YP_006293106.1 1298390 D 754477 CDS YP_006293107.1 387130217 12842513 1299132..1300049 1 NC_017856.1 PFAM: OmpA family; flagellar motor rotation protein MotB 1300049 12842513 Q7C_1270 Methylophaga frappieri flagellar motor rotation protein MotB YP_006293107.1 1299132 D 754477 CDS YP_006293108.1 387130218 12842514 1300224..1300703 1 NC_017856.1 PFAM: CheW-like domain; Positive regulator of CheA protein activity (CheW) 1300703 12842514 Q7C_1271 Methylophaga frappieri Positive regulator of CheA protein activity (CheW) YP_006293108.1 1300224 D 754477 CDS YP_006293109.1 387130219 12842515 1300710..1300883 1 NC_017856.1 hypothetical protein 1300883 12842515 Q7C_1272 Methylophaga frappieri hypothetical protein YP_006293109.1 1300710 D 754477 CDS YP_006293110.1 387130220 12842516 1300903..1301277 1 NC_017856.1 PFAM: Protein of unknown function (DUF2802); hypothetical protein 1301277 12842516 Q7C_1273 Methylophaga frappieri hypothetical protein YP_006293110.1 1300903 D 754477 CDS YP_006293111.1 387130221 12842517 complement(1301231..1303108) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1303108 12842517 Q7C_1274 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293111.1 1301231 R 754477 CDS YP_006293112.1 387130222 12842518 complement(1303237..1303455) 1 NC_017856.1 PFAM: FlhB HrpN YscU SpaS Family; flagellar protein FhlB cytoplasmic domain-containing protein 1303455 12842518 Q7C_1275 Methylophaga frappieri flagellar protein FhlB cytoplasmic domain-containing protein YP_006293112.1 1303237 R 754477 CDS YP_006293113.1 387130223 12842519 complement(1303536..1305104) 1 NC_017856.1 PFAM: Flagellar hook-length control protein FliK; molecular chaperone 1305104 12842519 Q7C_1276 Methylophaga frappieri molecular chaperone YP_006293113.1 1303536 R 754477 CDS YP_006293114.1 387130224 12842520 1305170..1306063 1 NC_017856.1 PFAM: Pentapeptide repeats (8 copies); low-complexity protein 1306063 12842520 Q7C_1277 Methylophaga frappieri low-complexity protein YP_006293114.1 1305170 D 754477 CDS YP_006293115.1 387130225 12842521 complement(1306069..1306449) 1 NC_017856.1 PFAM: Protein of unknown function (DUF525); ApaG protein 1306449 12842521 Q7C_1278 Methylophaga frappieri ApaG protein YP_006293115.1 1306069 R 754477 CDS YP_006293116.1 387130226 12842522 complement(1306458..1307426) 1 NC_017856.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase 1307426 12842522 Q7C_1279 Methylophaga frappieri glucokinase YP_006293116.1 1306458 R 754477 CDS YP_006293117.1 387130227 12842523 complement(1307430..1308140) 1 NC_017856.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase , eukaryotic type 1308140 12842523 Q7C_1280 Methylophaga frappieri 6-phosphogluconolactonase , eukaryotic type YP_006293117.1 1307430 R 754477 CDS YP_006293118.1 387130228 12842524 1308272..1308979 1 NC_017856.1 PFAM: Protein of unknown function (DUF541); periplasmic/secreted protein 1308979 12842524 Q7C_1281 Methylophaga frappieri periplasmic/secreted protein YP_006293118.1 1308272 D 754477 CDS YP_006293119.1 387130229 12842525 complement(1308976..1310502) 1 NC_017856.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; Threonine dehydratase biosynthetic 1310502 12842525 Q7C_1282 Methylophaga frappieri Threonine dehydratase biosynthetic YP_006293119.1 1308976 R 754477 CDS YP_006293120.1 387130230 12842526 1310608..1311270 1 NC_017856.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 1311270 12842526 Q7C_1283 Methylophaga frappieri ribose 5-phosphate isomerase A YP_006293120.1 1310608 D 754477 CDS YP_006293121.1 387130231 12842527 1311320..1312567 1 NC_017856.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; Lipoprotein releasing system transmembrane protein LolC 1312567 12842527 Q7C_1284 Methylophaga frappieri Lipoprotein releasing system transmembrane protein LolC YP_006293121.1 1311320 D 754477 CDS YP_006293122.1 387130232 12842528 1312560..1313240 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; Lipoprotein releasing system ATP-binding protein LolD 1313240 12842528 Q7C_1285 Methylophaga frappieri Lipoprotein releasing system ATP-binding protein LolD YP_006293122.1 1312560 D 754477 CDS YP_006293123.1 387130233 12842529 complement(1313230..1313757) 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062); hypothetical protein 1313757 12842529 Q7C_1286 Methylophaga frappieri hypothetical protein YP_006293123.1 1313230 R 754477 CDS YP_006293124.1 387130234 12842530 1313802..1316063 1 NC_017856.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; hypothetical protein 1316063 12842530 Q7C_1287 Methylophaga frappieri hypothetical protein YP_006293124.1 1313802 D 754477 CDS YP_006293125.1 387130235 12842531 1316115..1316750 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel family protein 1316750 12842531 Q7C_1288 Methylophaga frappieri MotA/TolQ/ExbB proton channel family protein YP_006293125.1 1316115 D 754477 CDS YP_006293126.1 387130236 12842532 1316747..1317172 1 NC_017856.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1317172 12842532 Q7C_1289 Methylophaga frappieri biopolymer transport protein ExbD/TolR YP_006293126.1 1316747 D 754477 CDS YP_006293127.1 387130237 12842533 1317169..1318920 1 NC_017856.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; Lipid A export ATP-binding/permease MsbA 1318920 12842533 Q7C_1290 Methylophaga frappieri Lipid A export ATP-binding/permease MsbA YP_006293127.1 1317169 D 754477 CDS YP_006293128.1 387130238 12842534 1318924..1319901 1 NC_017856.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1319901 12842534 Q7C_1291 Methylophaga frappieri tetraacyldisaccharide 4'-kinase YP_006293128.1 1318924 D 754477 CDS YP_006293129.1 387130239 12842535 1319894..1320070 1 NC_017856.1 PFAM: Trm112p-like protein; hypothetical protein 1320070 12842535 Q7C_1292 Methylophaga frappieri hypothetical protein YP_006293129.1 1319894 D 754477 CDS YP_006293130.1 387130240 12842536 1320073..1320831 1 NC_017856.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 1320831 12842536 Q7C_1293 Methylophaga frappieri 3-deoxy-manno-octulosonate cytidylyltransferase YP_006293130.1 1320073 D 754477 CDS YP_006293131.1 387130241 12842537 complement(1320814..1321092) 1 NC_017856.1 hypothetical protein 1321092 12842537 Q7C_1294 Methylophaga frappieri hypothetical protein YP_006293131.1 1320814 R 754477 CDS YP_006293132.1 387130242 12842538 complement(1321076..1323520) 1 NC_017856.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; Ribonuclease E 1323520 12842538 Q7C_1295 Methylophaga frappieri Ribonuclease E YP_006293132.1 1321076 R 754477 CDS YP_006293133.1 387130243 12842539 1323922..1325004 1 NC_017856.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; Ribosomal large subunit pseudouridine synthase C 1325004 12842539 Q7C_1296 Methylophaga frappieri Ribosomal large subunit pseudouridine synthase C YP_006293133.1 1323922 D 754477 CDS YP_006293134.1 387130244 12842540 1325043..1325657 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphoglycolate phosphatase 1325657 12842540 Q7C_1297 Methylophaga frappieri phosphoglycolate phosphatase YP_006293134.1 1325043 D 754477 CDS YP_006293135.1 387130245 12842541 1325696..1326685 1 NC_017856.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; Periplasmic serine proteases (ClpP class) 1326685 12842541 Q7C_1298 Methylophaga frappieri Periplasmic serine proteases (ClpP class) YP_006293135.1 1325696 D 754477 CDS YP_006293136.1 387130246 12842542 1326682..1326831 1 NC_017856.1 hypothetical protein 1326831 12842542 Q7C_1299 Methylophaga frappieri hypothetical protein YP_006293136.1 1326682 D 754477 CDS YP_006293137.1 387130247 12842543 1326828..1327679 1 NC_017856.1 PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; HD domain-containing protein 1327679 12842543 Q7C_1300 Methylophaga frappieri HD domain-containing protein YP_006293137.1 1326828 D 754477 CDS YP_006293138.1 387130248 12842544 1327718..1328365 1 NC_017856.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 1328365 12842544 Q7C_1301 Methylophaga frappieri adenylate kinase YP_006293138.1 1327718 D 754477 CDS YP_006293139.1 387130249 12842545 1328380..1329255 1 NC_017856.1 PFAM: pfkB family carbohydrate kinase; Ketohexokinase( ) 1329255 12842545 Q7C_1302 Methylophaga frappieri Ketohexokinase( ) YP_006293139.1 1328380 D 754477 CDS YP_006293140.1 387130250 12842546 1329248..1329601 1 NC_017856.1 PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) protein 1329601 12842546 Q7C_1303 Methylophaga frappieri Rieske (2Fe-2S) protein YP_006293140.1 1329248 D 754477 CDS YP_006293141.1 387130251 12842547 complement(1329578..1331590) 1 NC_017856.1 PFAM: Putative ATPase (DUF699); Domain of unknown function (DUF1726); hypothetical protein 1331590 12842547 Q7C_1304 Methylophaga frappieri hypothetical protein YP_006293141.1 1329578 R 754477 CDS YP_006293142.1 387130252 12842548 complement(1331598..1331801) 1 NC_017856.1 PFAM: SlyX; hypothetical protein 1331801 12842548 Q7C_1305 Methylophaga frappieri hypothetical protein YP_006293142.1 1331598 R 754477 CDS YP_006293143.1 387130253 12842549 complement(1331801..1335499) 1 NC_017856.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase 1335499 12842549 Q7C_1306 Methylophaga frappieri 5-methyltetrahydrofolate--homocysteine methyltransferase YP_006293143.1 1331801 R 754477 CDS YP_006293144.1 387130254 12842550 complement(1335581..1337287) 1 NC_017856.1 PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; Transporter associated domain; sodium/hydrogen exchanger 1337287 12842550 Q7C_1307 Methylophaga frappieri sodium/hydrogen exchanger YP_006293144.1 1335581 R 754477 CDS YP_006293145.1 387130255 12842551 complement(1337439..1339097) 1 NC_017856.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type; 2-isopropylmalate synthase 1339097 12842551 Q7C_1308 Methylophaga frappieri 2-isopropylmalate synthase YP_006293145.1 1337439 R 754477 CDS YP_006293146.1 387130256 12842552 1339412..1339894 1 NC_017856.1 PFAM: MarR family; AsnC family; AsnC family transcriptional regulator 1339894 12842552 Q7C_1309 Methylophaga frappieri AsnC family transcriptional regulator YP_006293146.1 1339412 D 754477 CDS YP_006293147.1 387130257 12842553 1340082..1341491 1 NC_017856.1 PFAM: PhoH-like protein; ATPase 1341491 12842553 Q7C_1310 Methylophaga frappieri ATPase YP_006293147.1 1340082 D 754477 CDS YP_006293148.1 387130258 12842554 1341546..1342163 1 NC_017856.1 PFAM: MbeD/MobD like; PilZ domain; PilZ domain-containing protein 1342163 12842554 Q7C_1311 Methylophaga frappieri PilZ domain-containing protein YP_006293148.1 1341546 D 754477 CDS YP_006293149.1 387130259 12842555 complement(1342160..1342876) 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein 1342876 12842555 Q7C_1312 Methylophaga frappieri hypothetical protein YP_006293149.1 1342160 R 754477 CDS YP_006293150.1 387130260 12842556 complement(1342870..1343535) 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthetase 1343535 12842556 Q7C_1313 Methylophaga frappieri dethiobiotin synthetase YP_006293150.1 1342870 R 754477 CDS YP_006293151.1 387130261 12842557 complement(1343532..1344419) 1 NC_017856.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; Biotin synthesis protein bioC 1344419 12842557 Q7C_1314 Methylophaga frappieri Biotin synthesis protein bioC YP_006293151.1 1343532 R 754477 CDS YP_006293152.1 387130262 12842558 complement(1344412..1345173) 1 NC_017856.1 TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH; Biotin synthesis protein bioH 1345173 12842558 Q7C_1315 Methylophaga frappieri Biotin synthesis protein bioH YP_006293152.1 1344412 R 754477 CDS YP_006293153.1 387130263 12842559 complement(1345163..1346338) 1 NC_017856.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 1346338 12842559 Q7C_1316 Methylophaga frappieri 8-amino-7-oxononanoate synthase YP_006293153.1 1345163 R 754477 CDS YP_006293154.1 387130264 12842560 complement(1346345..1347352) 1 NC_017856.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase; biotin synthase 1347352 12842560 Q7C_1317 Methylophaga frappieri biotin synthase YP_006293154.1 1346345 R 754477 CDS YP_006293155.1 387130265 12842561 1347311..1348111 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; competence protein F 1348111 12842561 Q7C_1318 Methylophaga frappieri competence protein F YP_006293155.1 1347311 D 754477 CDS YP_006293156.1 387130266 12842562 1348145..1349212 1 NC_017856.1 PFAM: Protein of unknown function, DUF484; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1349212 12842562 Q7C_1319 Methylophaga frappieri diguanylate cyclase YP_006293156.1 1348145 D 754477 CDS YP_006293157.1 387130267 12842563 complement(1349248..1350066) 1 NC_017856.1 PFAM: Staphylococcal nuclease homologue; nuclease-like protein 1350066 12842563 Q7C_1320 Methylophaga frappieri nuclease-like protein YP_006293157.1 1349248 R 754477 CDS YP_006293158.1 387130268 12842564 complement(1350081..1350938) 1 NC_017856.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; 4-hydroxybenzoate polyprenyltransferase 1350938 12842564 Q7C_1321 Methylophaga frappieri 4-hydroxybenzoate polyprenyltransferase YP_006293158.1 1350081 R 754477 CDS YP_006293159.1 387130269 12842565 complement(1350935..1351477) 1 NC_017856.1 PFAM: Chorismate lyase; chorismate--pyruvate lyase 1351477 12842565 Q7C_1322 Methylophaga frappieri chorismate--pyruvate lyase YP_006293159.1 1350935 R 754477 CDS YP_006293160.1 387130270 12842566 complement(1351474..1353558) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 1353558 12842566 Q7C_1323 Methylophaga frappieri ATP-dependent DNA helicase RecG YP_006293160.1 1351474 R 754477 CDS YP_006293161.1 387130271 12842567 complement(1353579..1353965) 1 NC_017856.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP 1353965 12842567 Q7C_1324 Methylophaga frappieri endoribonuclease L-PSP YP_006293161.1 1353579 R 754477 CDS YP_006293162.1 387130272 12842568 complement(1354013..1356184) 1 NC_017856.1 PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 1356184 12842568 Q7C_1325 Methylophaga frappieri GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_006293162.1 1354013 R 754477 CDS YP_006293163.1 387130273 12842569 complement(1356190..1356450) 1 NC_017856.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 1356450 12842569 Q7C_1326 Methylophaga frappieri DNA-directed RNA polymerase subunit omega YP_006293163.1 1356190 R 754477 CDS YP_006293164.1 387130274 12842570 complement(1356502..1357113) 1 NC_017856.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 1357113 12842570 Q7C_1327 Methylophaga frappieri guanylate kinase YP_006293164.1 1356502 R 754477 CDS YP_006293165.1 387130275 12842571 1357136..1357252 1 NC_017856.1 hypothetical protein 1357252 12842571 Q7C_1328 Methylophaga frappieri hypothetical protein YP_006293165.1 1357136 D 754477 CDS YP_006293166.1 387130276 12842572 1357332..1358357 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein 1358357 12842572 Q7C_1329 Methylophaga frappieri Ferric iron ABC transporter, iron-binding protein YP_006293166.1 1357332 D 754477 CDS YP_006293167.1 387130277 12842573 1358407..1360083 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein 1360083 12842573 Q7C_1330 Methylophaga frappieri Ferric iron ABC transporter, permease protein YP_006293167.1 1358407 D 754477 CDS YP_006293168.1 387130278 12842574 1360076..1361122 1 NC_017856.1 PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein 1361122 12842574 Q7C_1331 Methylophaga frappieri Ferric iron ABC transporter, ATP-binding protein YP_006293168.1 1360076 D 754477 CDS YP_006293169.1 387130279 12842575 complement(1361116..1361544) 1 NC_017856.1 PFAM: MerR family regulatory protein; MerR, DNA binding; MerR family transcriptional regulator 1361544 12842575 Q7C_1332 Methylophaga frappieri MerR family transcriptional regulator YP_006293169.1 1361116 R 754477 CDS YP_006293170.1 387130280 12842576 1361629..1362228 1 NC_017856.1 Tellurite resistance protein TehB 1362228 12842576 Q7C_1333 Methylophaga frappieri Tellurite resistance protein TehB YP_006293170.1 1361629 D 754477 CDS YP_006293171.1 387130281 12842577 complement(1362628..1363482) 1 NC_017856.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; protein YicC 1363482 12842577 Q7C_1334 Methylophaga frappieri protein YicC YP_006293171.1 1362628 R 754477 CDS YP_006293172.1 387130282 12842578 1363609..1364325 1 NC_017856.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; Ribonuclease PH 1364325 12842578 Q7C_1335 Methylophaga frappieri Ribonuclease PH YP_006293172.1 1363609 D 754477 CDS YP_006293173.1 387130283 12842579 1364370..1364927 1 NC_017856.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; nucleoside 5-triphosphatase RdgB 1364927 12842579 Q7C_1336 Methylophaga frappieri nucleoside 5-triphosphatase RdgB YP_006293173.1 1364370 D 754477 CDS YP_006293174.1 387130284 12842580 1364948..1366108 1 NC_017856.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; hypothetical protein 1366108 12842580 Q7C_1337 Methylophaga frappieri hypothetical protein YP_006293174.1 1364948 D 754477 CDS YP_006293175.1 387130285 12842581 1366146..1366442 1 NC_017856.1 hypothetical protein 1366442 12842581 Q7C_1338 Methylophaga frappieri hypothetical protein YP_006293175.1 1366146 D 754477 CDS YP_006293176.1 387130286 12842582 complement(1366443..1366958) 1 NC_017856.1 hypothetical protein 1366958 12842582 Q7C_1339 Methylophaga frappieri hypothetical protein YP_006293176.1 1366443 R 754477 CDS YP_006293177.1 387130287 12842583 complement(1366959..1368041) 1 NC_017856.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; Threonine synthase 1368041 12842583 Q7C_1340 Methylophaga frappieri Threonine synthase YP_006293177.1 1366959 R 754477 CDS YP_006293178.1 387130288 12842584 complement(1368077..1369387) 1 NC_017856.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; Homoserine dehydrogenase 1369387 12842584 Q7C_1341 Methylophaga frappieri Homoserine dehydrogenase YP_006293178.1 1368077 R 754477 CDS YP_006293179.1 387130289 12842585 complement(1369375..1370574) 1 NC_017856.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 1370574 12842585 Q7C_1342 Methylophaga frappieri Aspartate aminotransferase YP_006293179.1 1369375 R 754477 CDS YP_006293180.1 387130290 12842586 1370668..1371513 1 NC_017856.1 PFAM: HDOD domain; HD-GYP domain (HD superfamily hydrolase) 1371513 12842586 Q7C_1343 Methylophaga frappieri HD-GYP domain (HD superfamily hydrolase) YP_006293180.1 1370668 D 754477 CDS YP_006293181.1 387130291 12842587 complement(1371570..1371962) 1 NC_017856.1 PFAM: DoxX; hypothetical protein 1371962 12842587 Q7C_1344 Methylophaga frappieri hypothetical protein YP_006293181.1 1371570 R 754477 CDS YP_006293182.1 387130292 12842588 1372139..1372444 1 NC_017856.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA-protein-cysteine S-methyltransferase-like protein 1372444 12842588 Q7C_1345 Methylophaga frappieri methylated-DNA-protein-cysteine S-methyltransferase-like protein YP_006293182.1 1372139 D 754477 CDS YP_006293183.1 387130293 12842589 complement(1372441..1373235) 1 NC_017856.1 PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1373235 12842589 Q7C_1346 Methylophaga frappieri 3-oxoacyl-ACP reductase YP_006293183.1 1372441 R 754477 CDS YP_006293184.1 387130294 12842590 complement(1373303..1374133) 1 NC_017856.1 Thiol:disulfide interchange protein DsbG precursor 1374133 12842590 Q7C_1347 Methylophaga frappieri Thiol:disulfide interchange protein DsbG precursor YP_006293184.1 1373303 R 754477 CDS YP_006293185.1 387130295 12842728 1374243..1374764 1 NC_017856.1 PFAM: NlpC/P60 family; lipoprotein NlpC 1374764 12842728 Q7C_1348 Methylophaga frappieri lipoprotein NlpC YP_006293185.1 1374243 D 754477 CDS YP_006293186.1 387130296 12842729 complement(1374893..1375012) 1 NC_017856.1 hypothetical protein 1375012 12842729 Q7C_1349 Methylophaga frappieri hypothetical protein YP_006293186.1 1374893 R 754477 CDS YP_006293187.1 387130297 12842730 1375094..1375885 1 NC_017856.1 PFAM: Trypsin; Trypsin 1375885 12842730 Q7C_1350 Methylophaga frappieri Trypsin YP_006293187.1 1375094 D 754477 CDS YP_006293188.1 387130298 12842731 1375990..1376532 1 NC_017856.1 PFAM: Bacterial transferase hexapeptide (three repeats); carbonic anhydrase, family 3 1376532 12842731 Q7C_1351 Methylophaga frappieri carbonic anhydrase, family 3 YP_006293188.1 1375990 D 754477 CDS YP_006293189.1 387130299 12842732 complement(1376529..1377290) 1 NC_017856.1 PFAM: ABC-2 type transporter; multidrug ABC transporter permease 1377290 12842732 Q7C_1352 Methylophaga frappieri multidrug ABC transporter permease YP_006293189.1 1376529 R 754477 CDS YP_006293190.1 387130300 12842733 complement(1377287..1378243) 1 NC_017856.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 1378243 12842733 Q7C_1353 Methylophaga frappieri multidrug ABC transporter ATPase YP_006293190.1 1377287 R 754477 CDS YP_006293191.1 387130301 12842734 complement(1378376..1378678) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3144); hypothetical protein 1378678 12842734 Q7C_1354 Methylophaga frappieri hypothetical protein YP_006293191.1 1378376 R 754477 CDS YP_006293192.1 387130302 12842735 1379072..1381069 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins 1381069 12842735 Q7C_1355 Methylophaga frappieri TonB-dependent receptor, Outer membrane receptor for ferrienterochelin and colicins YP_006293192.1 1379072 D 754477 CDS YP_006293193.1 387130303 12842736 complement(1381066..1382424) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Signal transduction histidine kinase 1382424 12842736 Q7C_1356 Methylophaga frappieri Signal transduction histidine kinase YP_006293193.1 1381066 R 754477 CDS YP_006293194.1 387130304 12842737 complement(1382421..1383125) 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1383125 12842737 Q7C_1357 Methylophaga frappieri winged helix family two component transcriptional regulator YP_006293194.1 1382421 R 754477 CDS YP_006293195.1 387130305 12842738 1383276..1383557 1 NC_017856.1 hypothetical protein 1383557 12842738 Q7C_1358 Methylophaga frappieri hypothetical protein YP_006293195.1 1383276 D 754477 CDS YP_006293196.1 387130306 12842739 1383554..1385146 1 NC_017856.1 PFAM: PepSY-associated TM helix; iron-regulated membrane protein 1385146 12842739 Q7C_1359 Methylophaga frappieri iron-regulated membrane protein YP_006293196.1 1383554 D 754477 CDS YP_006293197.1 387130307 12842740 1385146..1385472 1 NC_017856.1 PFAM: Protein of unknown function (DUF3325); hypothetical protein 1385472 12842740 Q7C_1360 Methylophaga frappieri hypothetical protein YP_006293197.1 1385146 D 754477 CDS YP_006293198.1 387130308 12842741 complement(1385438..1385551) 1 NC_017856.1 hypothetical protein 1385551 12842741 Q7C_1361 Methylophaga frappieri hypothetical protein YP_006293198.1 1385438 R 754477 CDS YP_006293199.1 387130309 12842742 complement(1385801..1386646) 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 1386646 12842742 Q7C_1362 Methylophaga frappieri beta-lactamase YP_006293199.1 1385801 R 754477 CDS YP_006293200.1 387130310 12842743 complement(1386762..1386923) 1 NC_017856.1 hypothetical protein 1386923 12842743 Q7C_1363 Methylophaga frappieri hypothetical protein YP_006293200.1 1386762 R 754477 CDS YP_006293201.1 387130311 12842744 complement(1386992..1388080) 1 NC_017856.1 hypothetical protein 1388080 12842744 Q7C_1364 Methylophaga frappieri hypothetical protein YP_006293201.1 1386992 R 754477 CDS YP_006293202.1 387130312 12842745 complement(1388140..1388262) 1 NC_017856.1 hypothetical protein 1388262 12842745 Q7C_1365 Methylophaga frappieri hypothetical protein YP_006293202.1 1388140 R 754477 CDS YP_006293203.1 387130313 12842746 complement(1388302..1389015) 1 NC_017856.1 ZIP zinc transporter family protein 1389015 12842746 Q7C_1366 Methylophaga frappieri ZIP zinc transporter family protein YP_006293203.1 1388302 R 754477 CDS YP_006293204.1 387130314 12842747 complement(1389126..1389461) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1508); hypothetical protein 1389461 12842747 Q7C_1367 Methylophaga frappieri hypothetical protein YP_006293204.1 1389126 R 754477 CDS YP_006293205.1 387130315 12842748 1389546..1389665 1 NC_017856.1 hypothetical protein 1389665 12842748 Q7C_1368 Methylophaga frappieri hypothetical protein YP_006293205.1 1389546 D 754477 CDS YP_006293206.1 387130316 12842749 complement(1389630..1389959) 1 NC_017856.1 hypothetical protein 1389959 12842749 Q7C_1369 Methylophaga frappieri hypothetical protein YP_006293206.1 1389630 R 754477 CDS YP_006293207.1 387130317 12842750 complement(1390089..1390901) 1 NC_017856.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; hypothetical protein 1390901 12842750 Q7C_1370 Methylophaga frappieri hypothetical protein YP_006293207.1 1390089 R 754477 CDS YP_006293208.1 387130318 12842751 complement(1390944..1391408) 1 NC_017856.1 hypothetical protein 1391408 12842751 Q7C_1371 Methylophaga frappieri hypothetical protein YP_006293208.1 1390944 R 754477 CDS YP_006293209.1 387130319 12842752 complement(1391447..1392238) 1 NC_017856.1 hypothetical protein 1392238 12842752 Q7C_1372 Methylophaga frappieri hypothetical protein YP_006293209.1 1391447 R 754477 CDS YP_006293210.1 387130320 12842753 complement(1392303..1392668) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3478); hypothetical protein 1392668 12842753 Q7C_1373 Methylophaga frappieri hypothetical protein YP_006293210.1 1392303 R 754477 CDS YP_006293211.1 387130321 12842754 complement(1392895..1394388) 1 NC_017856.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase 1394388 12842754 Q7C_1374 Methylophaga frappieri lysyl-tRNA synthetase YP_006293211.1 1392895 R 754477 CDS YP_006293212.1 387130322 12842755 complement(1394390..1395436) 1 NC_017856.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 1395436 12842755 Q7C_1375 Methylophaga frappieri peptide chain release factor 2 YP_006293212.1 1394390 R 754477 CDS YP_006293213.1 387130323 12842756 complement(1395551..1396396) 1 NC_017856.1 PFAM: Peptidase family M23; LysM domain; Lipoprotein NlpD 1396396 12842756 Q7C_1376 Methylophaga frappieri Lipoprotein NlpD YP_006293213.1 1395551 R 754477 CDS YP_006293214.1 387130324 12842757 complement(1396398..1396973) 1 NC_017856.1 PFAM: SNARE associated Golgi protein; lipoprotein B 1396973 12842757 Q7C_1377 Methylophaga frappieri lipoprotein B YP_006293214.1 1396398 R 754477 CDS YP_006293215.1 387130325 12842758 complement(1396973..1397632) 1 NC_017856.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1397632 12842758 Q7C_1378 Methylophaga frappieri protein-L-isoaspartate O-methyltransferase YP_006293215.1 1396973 R 754477 CDS YP_006293216.1 387130326 12842759 complement(1397635..1398381) 1 NC_017856.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase 1398381 12842759 Q7C_1379 Methylophaga frappieri 5'-nucleotidase YP_006293216.1 1397635 R 754477 CDS YP_006293217.1 387130327 12842760 complement(1398500..1400731) 1 NC_017856.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; Topoisomerase IV subunit A 1400731 12842760 Q7C_1380 Methylophaga frappieri Topoisomerase IV subunit A YP_006293217.1 1398500 R 754477 CDS YP_006293218.1 387130328 12842761 complement(1400750..1402663) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; Topoisomerase IV subunit B 1402663 12842761 Q7C_1381 Methylophaga frappieri Topoisomerase IV subunit B YP_006293218.1 1400750 R 754477 CDS YP_006293219.1 387130329 12842762 complement(1402846..1404030) 1 NC_017856.1 PFAM: Aminotransferase class I and II; aminotransferase 1404030 12842762 Q7C_1382 Methylophaga frappieri aminotransferase YP_006293219.1 1402846 R 754477 CDS YP_006293220.1 387130330 12842763 complement(1404027..1406162) 1 NC_017856.1 PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein 1406162 12842763 Q7C_1383 Methylophaga frappieri hypothetical protein YP_006293220.1 1404027 R 754477 CDS YP_006293221.1 387130331 12842764 complement(1406228..1406809) 1 NC_017856.1 PFAM: Class II Aldolase and Adducin N-terminal domain; ribulose-5-phosphate 4-epimerase 1406809 12842764 Q7C_1384 Methylophaga frappieri ribulose-5-phosphate 4-epimerase YP_006293221.1 1406228 R 754477 CDS YP_006293222.1 387130332 12842765 complement(1406802..1408016) 1 NC_017856.1 TPR domain-containing protein 1408016 12842765 Q7C_1385 Methylophaga frappieri TPR domain-containing protein YP_006293222.1 1406802 R 754477 CDS YP_006293223.1 387130333 12842766 complement(1408016..1408672) 1 NC_017856.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB-like protein 1408672 12842766 Q7C_1386 Methylophaga frappieri TonB-like protein YP_006293223.1 1408016 R 754477 CDS YP_006293224.1 387130334 12842767 complement(1408681..1409088) 1 NC_017856.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1409088 12842767 Q7C_1387 Methylophaga frappieri biopolymer transport protein ExbD/TolR YP_006293224.1 1408681 R 754477 CDS YP_006293225.1 387130335 12842768 complement(1409098..1409613) 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB 1409613 12842768 Q7C_1388 Methylophaga frappieri Ferric siderophore transport system, biopolymer transport protein ExbB YP_006293225.1 1409098 R 754477 CDS YP_006293226.1 387130336 12842769 complement(1409606..1410955) 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel family protein 1410955 12842769 Q7C_1389 Methylophaga frappieri MotA/TolQ/ExbB proton channel family protein YP_006293226.1 1409606 R 754477 CDS YP_006293227.1 387130337 12842770 complement(1410952..1411737) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3450); TonB system biopolymer transport component, Chromosome segregation ATPase 1411737 12842770 Q7C_1390 Methylophaga frappieri TonB system biopolymer transport component, Chromosome segregation ATPase YP_006293227.1 1410952 R 754477 CDS YP_006293228.1 387130338 12842771 complement(1412050..1412685) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator 1412685 12842771 Q7C_1391 Methylophaga frappieri two-component response regulator YP_006293228.1 1412050 R 754477 CDS YP_006293229.1 387130339 12842772 complement(1412687..1414021) 1 NC_017856.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Periplasmic Sensor signal transduction Histidine Kinase 1414021 12842772 Q7C_1392 Methylophaga frappieri Periplasmic Sensor signal transduction Histidine Kinase YP_006293229.1 1412687 R 754477 CDS YP_006293230.1 387130340 12842773 1414102..1415388 1 NC_017856.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde aminotransferase 1415388 12842773 Q7C_1393 Methylophaga frappieri glutamate-1-semialdehyde aminotransferase YP_006293230.1 1414102 D 754477 CDS YP_006293231.1 387130341 12842774 1415389..1416834 1 NC_017856.1 PFAM: Exonuclease; Exonuclease C-terminal; Exodeoxyribonuclease I 1416834 12842774 Q7C_1394 Methylophaga frappieri Exodeoxyribonuclease I YP_006293231.1 1415389 D 754477 CDS YP_006293232.1 387130342 12842775 1416937..1419060 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1419060 12842775 Q7C_1395 Methylophaga frappieri TonB-dependent receptor YP_006293232.1 1416937 D 754477 CDS YP_006293233.1 387130343 12842776 complement(1419179..1419730) 1 NC_017856.1 PFAM: Isochorismatase family; isochorismatase 1419730 12842776 Q7C_1396 Methylophaga frappieri isochorismatase YP_006293233.1 1419179 R 754477 CDS YP_006293234.1 387130344 12842777 complement(1419764..1421080) 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC precursor 1421080 12842777 Q7C_1397 Methylophaga frappieri type I secretion outer membrane protein, TolC precursor YP_006293234.1 1419764 R 754477 CDS YP_006293235.1 387130345 12842778 complement(1421087..1421410) 1 NC_017856.1 PFAM: Rhodanese-like domain; Rhodanese 1421410 12842778 Q7C_1398 Methylophaga frappieri Rhodanese YP_006293235.1 1421087 R 754477 CDS YP_006293236.1 387130346 12842779 complement(1421425..1422081) 1 NC_017856.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase( ) 1422081 12842779 Q7C_1399 Methylophaga frappieri protein-L-isoaspartate(D-aspartate) O-methyltransferase( ) YP_006293236.1 1421425 R 754477 CDS YP_006293237.1 387130347 12842780 complement(1422227..1423015) 1 NC_017856.1 PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; ABC transporter permease 1423015 12842780 Q7C_1400 Methylophaga frappieri ABC transporter permease YP_006293237.1 1422227 R 754477 CDS YP_006293238.1 387130348 12842781 complement(1423012..1423938) 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 1423938 12842781 Q7C_1401 Methylophaga frappieri ABC transporter ATP-binding protein YP_006293238.1 1423012 R 754477 CDS YP_006293239.1 387130349 12842782 complement(1423928..1425121) 1 NC_017856.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E 1425121 12842782 Q7C_1402 Methylophaga frappieri coenzyme PQQ synthesis protein E YP_006293239.1 1423928 R 754477 CDS YP_006293240.1 387130350 12842783 complement(1425093..1425377) 1 NC_017856.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D 1425377 12842783 Q7C_1403 Methylophaga frappieri coenzyme PQQ synthesis protein D YP_006293240.1 1425093 R 754477 CDS YP_006293241.1 387130351 12842784 complement(1425374..1426105) 1 NC_017856.1 PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; Coenzyme PQQ synthesis protein C 1426105 12842784 Q7C_1404 Methylophaga frappieri Coenzyme PQQ synthesis protein C YP_006293241.1 1425374 R 754477 CDS YP_006293242.1 387130352 12842785 complement(1426117..1427031) 1 NC_017856.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ synthesis protein B 1427031 12842785 Q7C_1405 Methylophaga frappieri coenzyme PQQ synthesis protein B YP_006293242.1 1426117 R 754477 CDS YP_006293243.1 387130353 12842786 complement(1427474..1429252) 1 NC_017856.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein 1429252 12842786 Q7C_1406 Methylophaga frappieri Methanol dehydrogenase large subunit protein YP_006293243.1 1427474 R 754477 CDS YP_006293244.1 387130354 12842787 complement(1429447..1430085) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator 1430085 12842787 Q7C_1407 Methylophaga frappieri LuxR family two component transcriptional regulator YP_006293244.1 1429447 R 754477 CDS YP_006293245.1 387130355 12842788 complement(1430095..1431345) 1 NC_017856.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; multi-sensor signal transduction histidine kinase 1431345 12842788 Q7C_1408 Methylophaga frappieri multi-sensor signal transduction histidine kinase YP_006293245.1 1430095 R 754477 CDS YP_006293246.1 387130356 12842789 complement(1431525..1432169) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator 1432169 12842789 Q7C_1409 Methylophaga frappieri LuxR family two component transcriptional regulator YP_006293246.1 1431525 R 754477 CDS YP_006293247.1 387130357 12842790 complement(1432156..1433877) 1 NC_017856.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; methanol utilization control sensor protein moxY 1433877 12842790 Q7C_1410 Methylophaga frappieri methanol utilization control sensor protein moxY YP_006293247.1 1432156 R 754477 CDS YP_006293248.1 387130358 12842791 complement(1433874..1434191) 1 NC_017856.1 PFAM: Sulphur oxidation protein SoxZ; Sulfur oxidation protein SoxZ 1434191 12842791 Q7C_1411 Methylophaga frappieri Sulfur oxidation protein SoxZ YP_006293248.1 1433874 R 754477 CDS YP_006293249.1 387130359 12842792 complement(1434191..1434679) 1 NC_017856.1 Sulfur oxidation protein SoxY 1434679 12842792 Q7C_1412 Methylophaga frappieri Sulfur oxidation protein SoxY YP_006293249.1 1434191 R 754477 CDS YP_006293250.1 387130360 12842793 complement(1434676..1436124) 1 NC_017856.1 PFAM: Peptidase family M48; Exported zinc metalloprotease YfgC precursor 1436124 12842793 Q7C_1413 Methylophaga frappieri Exported zinc metalloprotease YfgC precursor YP_006293250.1 1434676 R 754477 CDS YP_006293251.1 387130361 12842794 1436238..1436474 1 NC_017856.1 PFAM: SirA-like protein; Molybdopterin biosynthesis MoeB protein 1436474 12842794 Q7C_1414 Methylophaga frappieri Molybdopterin biosynthesis MoeB protein YP_006293251.1 1436238 D 754477 CDS YP_006293252.1 387130362 12842795 1436474..1436938 1 NC_017856.1 NADH dehydrogenase 1436938 12842795 Q7C_1415 Methylophaga frappieri NADH dehydrogenase YP_006293252.1 1436474 D 754477 CDS YP_006293253.1 387130363 12842796 1436959..1437585 1 NC_017856.1 PFAM: Protein of unknown function (DUF502); hypothetical protein 1437585 12842796 Q7C_1416 Methylophaga frappieri hypothetical protein YP_006293253.1 1436959 D 754477 CDS YP_006293254.1 387130364 12842797 complement(1438335..1439831) 1 NC_017856.1 hypothetical protein 1439831 12842797 Q7C_1417 Methylophaga frappieri hypothetical protein YP_006293254.1 1438335 R 754477 CDS YP_006293255.1 387130365 12842798 1439955..1440152 1 NC_017856.1 TIGRFAM: DNA binding domain, excisionase family; transcriptional regulator 1440152 12842798 Q7C_1418 Methylophaga frappieri transcriptional regulator YP_006293255.1 1439955 D 754477 CDS YP_006293256.1 387130366 12842799 1440306..1441067 1 NC_017856.1 PFAM: Plasmid encoded RepA protein; plasmid encoded RepA protein 1441067 12842799 Q7C_1419 Methylophaga frappieri plasmid encoded RepA protein YP_006293256.1 1440306 D 754477 CDS YP_006293257.1 387130367 12842800 1442513..1442680 1 NC_017856.1 hypothetical protein 1442680 12842800 Q7C_1420 Methylophaga frappieri hypothetical protein YP_006293257.1 1442513 D 754477 CDS YP_006293258.1 387130368 12842801 1442762..1442953 1 NC_017856.1 hypothetical protein 1442953 12842801 Q7C_1421 Methylophaga frappieri hypothetical protein YP_006293258.1 1442762 D 754477 CDS YP_006293259.1 387130369 12842802 1443584..1444183 1 NC_017856.1 PFAM: Redoxin; Alkyl hydroperoxide reductase subunit C-like protein 1444183 12842802 Q7C_1422 Methylophaga frappieri Alkyl hydroperoxide reductase subunit C-like protein YP_006293259.1 1443584 D 754477 CDS YP_006293260.1 387130370 12842803 complement(1444887..1445027) 1 NC_017856.1 hypothetical protein 1445027 12842803 Q7C_1423 Methylophaga frappieri hypothetical protein YP_006293260.1 1444887 R 754477 CDS YP_006293261.1 387130371 12842804 1445994..1446134 1 NC_017856.1 hypothetical protein 1446134 12842804 Q7C_1424 Methylophaga frappieri hypothetical protein YP_006293261.1 1445994 D 754477 CDS YP_006293262.1 387130372 12842805 1446402..1446605 1 NC_017856.1 hypothetical protein 1446605 12842805 Q7C_1425 Methylophaga frappieri hypothetical protein YP_006293262.1 1446402 D 754477 CDS YP_006293263.1 387130373 12842806 complement(1446597..1446866) 1 NC_017856.1 hypothetical protein 1446866 12842806 Q7C_1426 Methylophaga frappieri hypothetical protein YP_006293263.1 1446597 R 754477 CDS YP_006293264.1 387130374 12842807 complement(1446894..1447901) 1 NC_017856.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; Inner membrane protein of type IV secretion of T-DNA complex, VirB6 1447901 12842807 Q7C_1427 Methylophaga frappieri Inner membrane protein of type IV secretion of T-DNA complex, VirB6 YP_006293264.1 1446894 R 754477 CDS YP_006293265.1 387130375 12842808 complement(1447916..1448131) 1 NC_017856.1 hypothetical protein 1448131 12842808 Q7C_1428 Methylophaga frappieri hypothetical protein YP_006293265.1 1447916 R 754477 CDS YP_006293266.1 387130376 12842809 complement(1448148..1448867) 1 NC_017856.1 PFAM: Type IV secretion system proteins; TIGRFAM: P-type DNA transfer protein VirB5; Minor pilin of type IV secretion complex, VirB5 1448867 12842809 Q7C_1429 Methylophaga frappieri Minor pilin of type IV secretion complex, VirB5 YP_006293266.1 1448148 R 754477 CDS YP_006293267.1 387130377 12842863 1449442..1449630 1 NC_017856.1 PFAM: Phd_YefM; Phd_YefM 1449630 12842863 Q7C_1430 Methylophaga frappieri Phd_YefM YP_006293267.1 1449442 D 754477 CDS YP_006293268.1 387130378 12842864 1449846..1449989 1 NC_017856.1 PFAM: Plasmid maintenance system killer protein; HigB toxin protein 1449989 12842864 Q7C_1431 Methylophaga frappieri HigB toxin protein YP_006293268.1 1449846 D 754477 CDS YP_006293269.1 387130379 12842865 1449989..1450327 1 NC_017856.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; plasmid maintenance system antidote protein 1450327 12842865 Q7C_1432 Methylophaga frappieri plasmid maintenance system antidote protein YP_006293269.1 1449989 D 754477 CDS YP_006293270.1 387130380 12842866 1450347..1450673 1 NC_017856.1 PFAM: HicB family; HicB protein 1450673 12842866 Q7C_1433 Methylophaga frappieri HicB protein YP_006293270.1 1450347 D 754477 CDS YP_006293271.1 387130381 12842867 1450687..1451178 1 NC_017856.1 hypothetical protein 1451178 12842867 Q7C_1434 Methylophaga frappieri hypothetical protein YP_006293271.1 1450687 D 754477 CDS YP_006293272.1 387130382 12842868 complement(1451223..1451900) 1 NC_017856.1 hypothetical protein 1451900 12842868 Q7C_1435 Methylophaga frappieri hypothetical protein YP_006293272.1 1451223 R 754477 CDS YP_006293273.1 387130383 12842869 1452744..1453535 1 NC_017856.1 PFAM: Divergent AAA domain; transcriptional regulator with HTH domain 1453535 12842869 Q7C_1436 Methylophaga frappieri transcriptional regulator with HTH domain YP_006293273.1 1452744 D 754477 CDS YP_006293274.1 387130384 12842870 complement(1453594..1454904) 1 NC_017856.1 hypothetical protein 1454904 12842870 Q7C_1437 Methylophaga frappieri hypothetical protein YP_006293274.1 1453594 R 754477 CDS YP_006293275.1 387130385 12842871 complement(1455372..1456085) 1 NC_017856.1 PFAM: DNA methylase; Adenine-specific methyltransferase 1456085 12842871 Q7C_1438 Methylophaga frappieri Adenine-specific methyltransferase YP_006293275.1 1455372 R 754477 CDS YP_006293276.1 387130386 12842872 complement(1456153..1457139) 1 NC_017856.1 PFAM: Phage integrase family; site-specific recombinase, phage integrase family 1457139 12842872 Q7C_1439 Methylophaga frappieri site-specific recombinase, phage integrase family YP_006293276.1 1456153 R 754477 CDS YP_006293277.1 387130387 12842874 complement(1457376..1457741) 1 NC_017856.1 PFAM: CbiX; Sirohydrochlorin cobaltochelatase 1457741 12842874 Q7C_1441 Methylophaga frappieri Sirohydrochlorin cobaltochelatase YP_006293277.1 1457376 R 754477 CDS YP_006293278.1 387130388 12842875 complement(1457756..1459408) 1 NC_017856.1 PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family; Acetate permease ActP (cation/acetate symporter) 1459408 12842875 Q7C_1442 Methylophaga frappieri Acetate permease ActP (cation/acetate symporter) YP_006293278.1 1457756 R 754477 CDS YP_006293279.1 387130389 12842876 complement(1459405..1459719) 1 NC_017856.1 PFAM: Protein of unknown function, DUF485; membrane protein, clustering with ActP 1459719 12842876 Q7C_1443 Methylophaga frappieri membrane protein, clustering with ActP YP_006293279.1 1459405 R 754477 CDS YP_006293280.1 387130390 12842877 1459797..1459928 1 NC_017856.1 hypothetical protein 1459928 12842877 Q7C_1444 Methylophaga frappieri hypothetical protein YP_006293280.1 1459797 D 754477 CDS YP_006293281.1 387130391 12842878 1459958..1461076 1 NC_017856.1 PFAM: HD domain; Response regulator receiver domain; response regulator 1461076 12842878 Q7C_1445 Methylophaga frappieri response regulator YP_006293281.1 1459958 D 754477 CDS YP_006293282.1 387130392 12842879 1461092..1463656 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; signal transduction histidine kinase 1463656 12842879 Q7C_1446 Methylophaga frappieri signal transduction histidine kinase YP_006293282.1 1461092 D 754477 CDS YP_006293283.1 387130393 12842880 complement(1463636..1464514) 1 NC_017856.1 PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase 1464514 12842880 Q7C_1447 Methylophaga frappieri enoyl-CoA hydratase YP_006293283.1 1463636 R 754477 CDS YP_006293284.1 387130394 12842881 complement(1464667..1465659) 1 NC_017856.1 PFAM: Histone deacetylase domain; deacetylase 1465659 12842881 Q7C_1448 Methylophaga frappieri deacetylase YP_006293284.1 1464667 R 754477 CDS YP_006293285.1 387130395 12842882 complement(1465695..1468220) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1468220 12842882 Q7C_1449 Methylophaga frappieri diguanylate cyclase/phosphodiesterase YP_006293285.1 1465695 R 754477 CDS YP_006293286.1 387130396 12842883 1468337..1469248 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; Cell division inhibitor 1469248 12842883 Q7C_1450 Methylophaga frappieri Cell division inhibitor YP_006293286.1 1468337 D 754477 CDS YP_006293287.1 387130397 12842884 1469258..1470271 1 NC_017856.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; Ferrochelatase, protoheme ferro-lyase 1470271 12842884 Q7C_1451 Methylophaga frappieri Ferrochelatase, protoheme ferro-lyase YP_006293287.1 1469258 D 754477 CDS YP_006293288.1 387130398 12842885 complement(1470273..1470761) 1 NC_017856.1 PFAM: FlgN protein; flagellar biosynthesis protein FlgN 1470761 12842885 Q7C_1452 Methylophaga frappieri flagellar biosynthesis protein FlgN YP_006293288.1 1470273 R 754477 CDS YP_006293289.1 387130399 12842886 complement(1470776..1471078) 1 NC_017856.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; flagellar biosynthesis anti-sigma factor FlgM 1471078 12842886 Q7C_1453 Methylophaga frappieri flagellar biosynthesis anti-sigma factor FlgM YP_006293289.1 1470776 R 754477 CDS YP_006293290.1 387130400 12842887 complement(1471147..1471851) 1 NC_017856.1 PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagellar basal-body P-ring formation protein FlgA 1471851 12842887 Q7C_1454 Methylophaga frappieri flagellar basal-body P-ring formation protein FlgA YP_006293290.1 1471147 R 754477 CDS YP_006293291.1 387130401 12842888 complement(1471985..1473112) 1 NC_017856.1 hypothetical protein 1473112 12842888 Q7C_1455 Methylophaga frappieri hypothetical protein YP_006293291.1 1471985 R 754477 CDS YP_006293292.1 387130402 12842889 complement(1473119..1475047) 1 NC_017856.1 PFAM: ABC-type uncharacterized transport system; gliding motility protein GldG 1475047 12842889 Q7C_1456 Methylophaga frappieri gliding motility protein GldG YP_006293292.1 1473119 R 754477 CDS YP_006293293.1 387130403 12842890 complement(1475058..1475798) 1 NC_017856.1 gliding motility protein GldF 1475798 12842890 Q7C_1457 Methylophaga frappieri gliding motility protein GldF YP_006293293.1 1475058 R 754477 CDS YP_006293294.1 387130404 12842891 complement(1475798..1476745) 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 1476745 12842891 Q7C_1458 Methylophaga frappieri ABC transporter ATP-binding protein YP_006293294.1 1475798 R 754477 CDS YP_006293295.1 387130405 12842892 1476944..1477993 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2333); hypothetical protein 1477993 12842892 Q7C_1459 Methylophaga frappieri hypothetical protein YP_006293295.1 1476944 D 754477 CDS YP_006293296.1 387130406 12842893 1478068..1479144 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdopterin biosynthesis protein MoeA/molybdate-binding domain-containing protein 1479144 12842893 Q7C_1460 Methylophaga frappieri molybdopterin biosynthesis protein MoeA/molybdate-binding domain-containing protein YP_006293296.1 1478068 D 754477 CDS YP_006293297.1 387130407 12842894 complement(1479160..1479639) 1 NC_017856.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; Molybdenum cofactor biosynthesis protein MoaC 1479639 12842894 Q7C_1461 Methylophaga frappieri Molybdenum cofactor biosynthesis protein MoaC YP_006293297.1 1479160 R 754477 CDS YP_006293298.1 387130408 12842895 1479683..1479910 1 NC_017856.1 PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 1479910 12842895 Q7C_1462 Methylophaga frappieri molybdopterin converting factor subunit 1 YP_006293298.1 1479683 D 754477 CDS YP_006293299.1 387130409 12842896 1479912..1480346 1 NC_017856.1 PFAM: MoaE protein; Molybdenum cofactor biosynthesis protein MoaE 1480346 12842896 Q7C_1463 Methylophaga frappieri Molybdenum cofactor biosynthesis protein MoaE YP_006293299.1 1479912 D 754477 CDS YP_006293300.1 387130410 12842897 1480620..1481111 1 NC_017856.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; NAD-dependent formate dehydrogenase gamma subunit 1481111 12842897 Q7C_1464 Methylophaga frappieri NAD-dependent formate dehydrogenase gamma subunit YP_006293300.1 1480620 D 754477 CDS YP_006293301.1 387130411 12842898 1481111..1482658 1 NC_017856.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NAD-dependent formate dehydrogenase subunit beta 1482658 12842898 Q7C_1465 Methylophaga frappieri NAD-dependent formate dehydrogenase subunit beta YP_006293301.1 1481111 D 754477 CDS YP_006293302.1 387130412 12842899 1482662..1485532 1 NC_017856.1 PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase subunit alpha 1485532 12842899 Q7C_1466 Methylophaga frappieri NAD-dependent formate dehydrogenase subunit alpha YP_006293302.1 1482662 D 754477 CDS YP_006293303.1 387130413 12842900 1485532..1486347 1 NC_017856.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D 1486347 12842900 Q7C_1467 Methylophaga frappieri formate dehydrogenase subunit D YP_006293303.1 1485532 D 754477 CDS YP_006293304.1 387130414 12842901 1486360..1486602 1 NC_017856.1 PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD; NADH-dependent formate dehydrogenase delta subunit FdsD 1486602 12842901 Q7C_1468 Methylophaga frappieri NADH-dependent formate dehydrogenase delta subunit FdsD YP_006293304.1 1486360 D 754477 CDS YP_006293305.1 387130415 12842902 1486681..1488411 1 NC_017856.1 PFAM: Major Facilitator Superfamily; major facilitator superfamily permease 1488411 12842902 Q7C_1469 Methylophaga frappieri major facilitator superfamily permease YP_006293305.1 1486681 D 754477 CDS YP_006293306.1 387130416 12842903 complement(1488448..1489920) 1 NC_017856.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase 1489920 12842903 Q7C_1470 Methylophaga frappieri 3-polyprenyl-4-hydroxybenzoate carboxy-lyase YP_006293306.1 1488448 R 754477 CDS YP_006293307.1 387130417 12842904 complement(1489952..1490908) 1 NC_017856.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: integron integrase; Integron integrase IntI4 1490908 12842904 Q7C_1471 Methylophaga frappieri Integron integrase IntI4 YP_006293307.1 1489952 R 754477 CDS YP_006293308.1 387130418 12842905 1491101..1491412 1 NC_017856.1 hypothetical protein 1491412 12842905 Q7C_1472 Methylophaga frappieri hypothetical protein YP_006293308.1 1491101 D 754477 CDS YP_006293309.1 387130419 12842906 1491668..1492573 1 NC_017856.1 hypothetical protein 1492573 12842906 Q7C_1473 Methylophaga frappieri hypothetical protein YP_006293309.1 1491668 D 754477 CDS YP_006293310.1 387130420 12842907 1492655..1493473 1 NC_017856.1 hypothetical protein 1493473 12842907 Q7C_1474 Methylophaga frappieri hypothetical protein YP_006293310.1 1492655 D 754477 CDS YP_006293311.1 387130421 12842908 1493592..1494266 1 NC_017856.1 hypothetical protein 1494266 12842908 Q7C_1475 Methylophaga frappieri hypothetical protein YP_006293311.1 1493592 D 754477 CDS YP_006293312.1 387130422 12842909 1494357..1495154 1 NC_017856.1 hypothetical protein 1495154 12842909 Q7C_1476 Methylophaga frappieri hypothetical protein YP_006293312.1 1494357 D 754477 CDS YP_006293313.1 387130423 12842910 complement(1495244..1495381) 1 NC_017856.1 hypothetical protein 1495381 12842910 Q7C_1477 Methylophaga frappieri hypothetical protein YP_006293313.1 1495244 R 754477 CDS YP_006293314.1 387130424 12842911 complement(1495527..1495748) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3423); hypothetical protein 1495748 12842911 Q7C_1478 Methylophaga frappieri hypothetical protein YP_006293314.1 1495527 R 754477 CDS YP_006293315.1 387130425 12842912 complement(1495751..1495909) 1 NC_017856.1 hypothetical protein 1495909 12842912 Q7C_1479 Methylophaga frappieri hypothetical protein YP_006293315.1 1495751 R 754477 CDS YP_006293316.1 387130426 12842913 1495950..1496603 1 NC_017856.1 hypothetical protein 1496603 12842913 Q7C_1480 Methylophaga frappieri hypothetical protein YP_006293316.1 1495950 D 754477 CDS YP_006293317.1 387130427 12842914 1496584..1496706 1 NC_017856.1 hypothetical protein 1496706 12842914 Q7C_1481 Methylophaga frappieri hypothetical protein YP_006293317.1 1496584 D 754477 CDS YP_006293318.1 387130428 12842915 1496703..1497425 1 NC_017856.1 hypothetical protein 1497425 12842915 Q7C_1482 Methylophaga frappieri hypothetical protein YP_006293318.1 1496703 D 754477 CDS YP_006293319.1 387130429 12842916 1497535..1498335 1 NC_017856.1 PFAM: TIR domain; TIR domain-containing protein 1498335 12842916 Q7C_1483 Methylophaga frappieri TIR domain-containing protein YP_006293319.1 1497535 D 754477 CDS YP_006293320.1 387130430 12843000 1498844..1499089 1 NC_017856.1 hypothetical protein 1499089 12843000 Q7C_1484 Methylophaga frappieri hypothetical protein YP_006293320.1 1498844 D 754477 CDS YP_006293321.1 387130431 12843001 1500317..1500853 1 NC_017856.1 hypothetical protein 1500853 12843001 Q7C_1485 Methylophaga frappieri hypothetical protein YP_006293321.1 1500317 D 754477 CDS YP_006293322.1 387130432 12843002 complement(1500947..1501192) 1 NC_017856.1 hypothetical protein 1501192 12843002 Q7C_1486 Methylophaga frappieri hypothetical protein YP_006293322.1 1500947 R 754477 CDS YP_006293323.1 387130433 12843003 1501167..1502381 1 NC_017856.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; Chromate transport protein ChrA 1502381 12843003 Q7C_1487 Methylophaga frappieri Chromate transport protein ChrA YP_006293323.1 1501167 D 754477 CDS YP_006293324.1 387130434 12843004 complement(1502507..1502683) 1 NC_017856.1 hypothetical protein 1502683 12843004 Q7C_1488 Methylophaga frappieri hypothetical protein YP_006293324.1 1502507 R 754477 CDS YP_006293325.1 387130435 12843005 1502722..1503111 1 NC_017856.1 PFAM: Protein of unknown function (DUF419); Mll3428 protein 1503111 12843005 Q7C_1489 Methylophaga frappieri Mll3428 protein YP_006293325.1 1502722 D 754477 CDS YP_006293326.1 387130436 12843006 1503245..1504291 1 NC_017856.1 PFAM: Uncharacterized conserved protein (DUF2235); hypothetical protein 1504291 12843006 Q7C_1490 Methylophaga frappieri hypothetical protein YP_006293326.1 1503245 D 754477 CDS YP_006293327.1 387130437 12843007 complement(1504308..1504946) 1 NC_017856.1 PFAM: short chain dehydrogenase; flavin reductase 1504946 12843007 Q7C_1491 Methylophaga frappieri flavin reductase YP_006293327.1 1504308 R 754477 CDS YP_006293328.1 387130438 12843008 complement(1504959..1505165) 1 NC_017856.1 PFAM: Helix-turn-helix; Cro/CI family transcriptional regulator 1505165 12843008 Q7C_1492 Methylophaga frappieri Cro/CI family transcriptional regulator YP_006293328.1 1504959 R 754477 CDS YP_006293329.1 387130439 12843009 complement(1505162..1505539) 1 NC_017856.1 hypothetical protein 1505539 12843009 Q7C_1493 Methylophaga frappieri hypothetical protein YP_006293329.1 1505162 R 754477 CDS YP_006293330.1 387130440 12843010 1505735..1506028 1 NC_017856.1 hypothetical protein 1506028 12843010 Q7C_1494 Methylophaga frappieri hypothetical protein YP_006293330.1 1505735 D 754477 CDS YP_006293331.1 387130441 12843011 1506139..1506654 1 NC_017856.1 hypothetical protein 1506654 12843011 Q7C_1495 Methylophaga frappieri hypothetical protein YP_006293331.1 1506139 D 754477 CDS YP_006293332.1 387130442 12843012 1506712..1507125 1 NC_017856.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; Regulator of nucleoside diphosphate kinase 1507125 12843012 Q7C_1496 Methylophaga frappieri Regulator of nucleoside diphosphate kinase YP_006293332.1 1506712 D 754477 CDS YP_006293333.1 387130443 12843013 1507226..1507492 1 NC_017856.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1507492 12843013 Q7C_1497 Methylophaga frappieri phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_006293333.1 1507226 D 754477 CDS YP_006293334.1 387130444 12843014 complement(1507550..1509589) 1 NC_017856.1 PFAM: Peptidase family M3; oligopeptidase A 1509589 12843014 Q7C_1498 Methylophaga frappieri oligopeptidase A YP_006293334.1 1507550 R 754477 CDS YP_006293335.1 387130445 12843015 1509722..1510516 1 NC_017856.1 UDP-2,3-diacylglucosamine hydrolase-like protein 1510516 12843015 Q7C_1499 Methylophaga frappieri UDP-2,3-diacylglucosamine hydrolase-like protein YP_006293335.1 1509722 D 754477 CDS YP_006293336.1 387130446 12843016 1510516..1511550 1 NC_017856.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 1511550 12843016 Q7C_1500 Methylophaga frappieri glycosyltransferase YP_006293336.1 1510516 D 754477 CDS YP_006293337.1 387130447 12843017 complement(1511501..1511638) 1 NC_017856.1 hypothetical protein 1511638 12843017 Q7C_1501 Methylophaga frappieri hypothetical protein YP_006293337.1 1511501 R 754477 CDS YP_006293338.1 387130448 12843018 1511688..1512416 1 NC_017856.1 PFAM: VacJ like lipoprotein; Lipoprotein 1512416 12843018 Q7C_1502 Methylophaga frappieri Lipoprotein YP_006293338.1 1511688 D 754477 CDS YP_006293339.1 387130449 12843019 1512558..1513535 1 NC_017856.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; arabinose 5-phosphate isomerase 1513535 12843019 Q7C_1503 Methylophaga frappieri arabinose 5-phosphate isomerase YP_006293339.1 1512558 D 754477 CDS YP_006293340.1 387130450 12843020 1513549..1514070 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1514070 12843020 Q7C_1504 Methylophaga frappieri 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_006293340.1 1513549 D 754477 CDS YP_006293341.1 387130451 12843021 1514054..1514635 1 NC_017856.1 PFAM: Protein of unknown function (DUF1239); hypothetical protein 1514635 12843021 Q7C_1505 Methylophaga frappieri hypothetical protein YP_006293341.1 1514054 D 754477 CDS YP_006293342.1 387130452 12843022 1514616..1515404 1 NC_017856.1 PFAM: OstA-like protein; Bacterial SH3 domain; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; LptA, protein essential for LPS transport across the periplasm 1515404 12843022 Q7C_1506 Methylophaga frappieri LptA, protein essential for LPS transport across the periplasm YP_006293342.1 1514616 D 754477 CDS YP_006293343.1 387130453 12843023 1515410..1516135 1 NC_017856.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Lipopolysaccharide ABC transporter, ATP-binding protein LptB 1516135 12843023 Q7C_1507 Methylophaga frappieri Lipopolysaccharide ABC transporter, ATP-binding protein LptB YP_006293343.1 1515410 D 754477 CDS YP_006293344.1 387130454 12843024 1516187..1518871 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1518871 12843024 Q7C_1508 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293344.1 1516187 D 754477 CDS YP_006293345.1 387130455 12843025 complement(1518881..1520332) 1 NC_017856.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit 1520332 12843025 Q7C_1509 Methylophaga frappieri Exodeoxyribonuclease VII large subunit YP_006293345.1 1518881 R 754477 CDS YP_006293346.1 387130456 12843026 1520395..1521858 1 NC_017856.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; Inosine-5'-monophosphate dehydrogenase 1521858 12843026 Q7C_1510 Methylophaga frappieri Inosine-5'-monophosphate dehydrogenase YP_006293346.1 1520395 D 754477 CDS YP_006293347.1 387130457 12843027 1521907..1523484 1 NC_017856.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 1523484 12843027 Q7C_1511 Methylophaga frappieri GMP synthase YP_006293347.1 1521907 D 754477 CDS YP_006293348.1 387130458 12843028 complement(1523612..1523761) 1 NC_017856.1 hypothetical protein 1523761 12843028 Q7C_1512 Methylophaga frappieri hypothetical protein YP_006293348.1 1523612 R 754477 CDS YP_006293349.1 387130459 12843029 1523793..1524989 1 NC_017856.1 PFAM: Phage integrase family; Integrase 1524989 12843029 Q7C_1513 Methylophaga frappieri Integrase YP_006293349.1 1523793 D 754477 CDS YP_006293350.1 387130460 12843030 complement(1524973..1525158) 1 NC_017856.1 PFAM: Prophage CP4-57 regulatory protein (AlpA); transcriptional regulator 1525158 12843030 Q7C_1514 Methylophaga frappieri transcriptional regulator YP_006293350.1 1524973 R 754477 CDS YP_006293351.1 387130461 12843031 complement(1525465..1526139) 1 NC_017856.1 PFAM: Peptidase S24-like; Peptidase S24, S26A and S26B 1526139 12843031 Q7C_1515 Methylophaga frappieri Peptidase S24, S26A and S26B YP_006293351.1 1525465 R 754477 CDS YP_006293352.1 387130462 12843032 1526223..1526522 1 NC_017856.1 hypothetical protein 1526522 12843032 Q7C_1516 Methylophaga frappieri hypothetical protein YP_006293352.1 1526223 D 754477 CDS YP_006293353.1 387130463 12843033 1526746..1528029 1 NC_017856.1 TIGRFAM: integrating conjugative element, PFGI_1 class, ParB family protein; protein with ParB-like nuclease domain in PFGI-1-like cluster 1528029 12843033 Q7C_1517 Methylophaga frappieri protein with ParB-like nuclease domain in PFGI-1-like cluster YP_006293353.1 1526746 D 754477 CDS YP_006293354.1 387130464 12843034 1528016..1528618 1 NC_017856.1 PFAM: Protein of unknown function (DUF2857); hypothetical protein 1528618 12843034 Q7C_1518 Methylophaga frappieri hypothetical protein YP_006293354.1 1528016 D 754477 CDS YP_006293355.1 387130465 12843035 1528578..1529864 1 NC_017856.1 FIG141751: hypothetical protein in PFGI-1-like cluster; hypothetical protein 1529864 12843035 Q7C_1519 Methylophaga frappieri hypothetical protein YP_006293355.1 1528578 D 754477 CDS YP_006293356.1 387130466 12843036 1530052..1530792 1 NC_017856.1 PFAM: Domain of unknown function (DUF1845); TIGRFAM: integrating conjugative element protein, PFL_4669 family; integrating conjugative element protein 1530792 12843036 Q7C_1520 Methylophaga frappieri integrating conjugative element protein YP_006293356.1 1530052 D 754477 CDS YP_006293357.1 387130467 12843037 1531226..1532332 1 NC_017856.1 PFAM: StbA protein; bacterial StbA plasmid stability protein 1532332 12843037 Q7C_1521 Methylophaga frappieri bacterial StbA plasmid stability protein YP_006293357.1 1531226 D 754477 CDS YP_006293358.1 387130468 12843038 1532522..1532950 1 NC_017856.1 PFAM: Protein of unknown function (DUF3577); hypothetical protein 1532950 12843038 Q7C_1522 Methylophaga frappieri hypothetical protein YP_006293358.1 1532522 D 754477 CDS YP_006293359.1 387130469 12843039 1533055..1533570 1 NC_017856.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1533570 12843039 Q7C_1523 Methylophaga frappieri DNA repair protein RadC YP_006293359.1 1533055 D 754477 CDS YP_006293360.1 387130470 12843040 1533664..1534089 1 NC_017856.1 hypothetical protein 1534089 12843040 Q7C_1524 Methylophaga frappieri hypothetical protein YP_006293360.1 1533664 D 754477 CDS YP_006293361.1 387130471 12843041 1534931..1535797 1 NC_017856.1 integrase 1535797 12843041 Q7C_1525 Methylophaga frappieri integrase YP_006293361.1 1534931 D 754477 CDS YP_006293362.1 387130472 12843042 1535999..1536406 1 NC_017856.1 TIGRFAM: conjugative transfer region protein, TIGR03748 family; PilL protein 1536406 12843042 Q7C_1526 Methylophaga frappieri PilL protein YP_006293362.1 1535999 D 754477 CDS YP_006293363.1 387130473 12843043 1536406..1536633 1 NC_017856.1 hypothetical protein 1536633 12843043 Q7C_1527 Methylophaga frappieri hypothetical protein YP_006293363.1 1536406 D 754477 CDS YP_006293364.1 387130474 12843044 1536623..1537441 1 NC_017856.1 TIGRFAM: integrating conjugative element protein, PFL_4693 family; hypothetical protein 1537441 12843044 Q7C_1528 Methylophaga frappieri hypothetical protein YP_006293364.1 1536623 D 754477 CDS YP_006293365.1 387130475 12843045 1537697..1538014 1 NC_017856.1 PFAM: Transglycosylase SLT domain; secreted protein containing a transglycosylase S LT domain 1538014 12843045 Q7C_1529 Methylophaga frappieri secreted protein containing a transglycosylase S LT domain YP_006293365.1 1537697 D 754477 CDS YP_006293366.1 387130476 12843046 1538253..1538570 1 NC_017856.1 PFAM: Protein of unknown function (DUF2859); TIGRFAM: integrating conjugative element protein, PFL_4695 family; integrating conjugative element protein 1538570 12843046 Q7C_1530 Methylophaga frappieri integrating conjugative element protein YP_006293366.1 1538253 D 754477 CDS YP_006293367.1 387130477 12843047 1538582..1540696 1 NC_017856.1 PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: conjugative coupling factor TraD, TOL family; conjugative coupling factor TraD, SXT/TOL subfamily; type IV secretory pathway, VirD4 components 1540696 12843047 Q7C_1531 Methylophaga frappieri type IV secretory pathway, VirD4 components YP_006293367.1 1538582 D 754477 CDS YP_006293368.1 387130478 12843048 1540702..1541430 1 NC_017856.1 TIGRFAM: integrating conjugative element membrane protein, PFL_4697 family; hypothetical protein 1541430 12843048 Q7C_1532 Methylophaga frappieri hypothetical protein YP_006293368.1 1540702 D 754477 CDS YP_006293369.1 387130479 12843049 1541529..1541930 1 NC_017856.1 PFAM: Protein of unknown function (DUF2384); hypothetical protein 1541930 12843049 Q7C_1533 Methylophaga frappieri hypothetical protein YP_006293369.1 1541529 D 754477 CDS YP_006293370.1 387130480 12843050 1541927..1542619 1 NC_017856.1 PFAM: RES domain; RES domain-containing protein 1542619 12843050 Q7C_1534 Methylophaga frappieri RES domain-containing protein YP_006293370.1 1541927 D 754477 CDS YP_006293371.1 387130481 12843051 1542625..1543215 1 NC_017856.1 PFAM: Exonuclease; DNA polymerase III subunit epsilon 1543215 12843051 Q7C_1535 Methylophaga frappieri DNA polymerase III subunit epsilon YP_006293371.1 1542625 D 754477 CDS YP_006293372.1 387130482 12843052 1543310..1544656 1 NC_017856.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); reverse transcriptase 1544656 12843052 Q7C_1536 Methylophaga frappieri reverse transcriptase YP_006293372.1 1543310 D 754477 CDS YP_006293373.1 387130483 12843053 1544649..1546718 1 NC_017856.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); reverse transcriptase 1546718 12843053 Q7C_1537 Methylophaga frappieri reverse transcriptase YP_006293373.1 1544649 D 754477 CDS YP_006293374.1 387130484 12843054 1547050..1547352 1 NC_017856.1 PFAM: Plasmid protein of unknown function (Plasmid_RAQPRD); TIGRFAM: integrative conjugative element protein, RAQPRD family; integrative conjugative element protein 1547352 12843054 Q7C_1538 Methylophaga frappieri integrative conjugative element protein YP_006293374.1 1547050 D 754477 CDS YP_006293375.1 387130485 12843055 1547361..1547591 1 NC_017856.1 PFAM: Protein of unknown function (DUF3262); TIGRFAM: integrating conjugative element protein, PFL_4701 family; integrating conjugative element protein 1547591 12843055 Q7C_1539 Methylophaga frappieri integrating conjugative element protein YP_006293375.1 1547361 D 754477 CDS YP_006293376.1 387130486 12843056 1547703..1548080 1 NC_017856.1 PFAM: Protein of unknown function (DUF2976); TIGRFAM: integrating conjugative element membrane protein, PFL_4702 family; integrating conjugative element membrane protein 1548080 12843056 Q7C_1540 Methylophaga frappieri integrating conjugative element membrane protein YP_006293376.1 1547703 D 754477 CDS YP_006293377.1 387130487 12843057 1548119..1548499 1 NC_017856.1 PFAM: Protein of unknown function (DUF3487); TIGRFAM: conjugative transfer region protein, TIGR03750 family; conjugative transfer region protein 1548499 12843057 Q7C_1541 Methylophaga frappieri conjugative transfer region protein YP_006293377.1 1548119 D 754477 CDS YP_006293378.1 387130488 12843058 1548471..1549148 1 NC_017856.1 PFAM: Protein of unknown function (DUF2895); TIGRFAM: integrating conjugative element protein, PFL_4703 family; hypothetical protein 1549148 12843058 Q7C_1542 Methylophaga frappieri hypothetical protein YP_006293378.1 1548471 D 754477 CDS YP_006293379.1 387130489 12843059 1549145..1549966 1 NC_017856.1 PFAM: Protein of unknown function (DUF3438); TIGRFAM: integrating conjugative element protein, PFL_4704 family; integrating conjugative element protein 1549966 12843059 Q7C_1543 Methylophaga frappieri integrating conjugative element protein YP_006293379.1 1549145 D 754477 CDS YP_006293380.1 387130490 12843060 1549999..1551420 1 NC_017856.1 TIGRFAM: integrating conjugative element protein, PFL_4705 family; integrating conjugative element protein 1551420 12843060 Q7C_1544 Methylophaga frappieri integrating conjugative element protein YP_006293380.1 1549999 D 754477 CDS YP_006293381.1 387130491 12843061 1551482..1551823 1 NC_017856.1 TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; lipoprotein 1551823 12843061 Q7C_1545 Methylophaga frappieri lipoprotein YP_006293381.1 1551482 D 754477 CDS YP_006293382.1 387130492 12843062 1551833..1554556 1 NC_017856.1 PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: conjugative transfer ATPase, PFL_4706 family; type IV secretory pathway, VirB4 components 1554556 12843062 Q7C_1546 Methylophaga frappieri type IV secretory pathway, VirB4 components YP_006293382.1 1551833 D 754477 CDS YP_006293383.1 387130493 12843063 complement(1554571..1555398) 1 NC_017856.1 PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; Zn-finger domain-containing protein (topoisomerase type I-like) 1555398 12843063 Q7C_1547 Methylophaga frappieri Zn-finger domain-containing protein (topoisomerase type I-like) YP_006293383.1 1554571 R 754477 CDS YP_006293384.1 387130494 12843064 1555813..1555998 1 NC_017856.1 PFAM: Protein of unknown function (DUF1525); TIGRFAM: integrating conjugative element protein, PFL_4709 family; hypothetical protein 1555998 12843064 Q7C_1548 Methylophaga frappieri hypothetical protein YP_006293384.1 1555813 D 754477 CDS YP_006293385.1 387130495 12843065 1555995..1557020 1 NC_017856.1 PFAM: TraU protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; integrating conjugative element protein 1557020 12843065 Q7C_1549 Methylophaga frappieri integrating conjugative element protein YP_006293385.1 1555995 D 754477 CDS YP_006293386.1 387130496 12843066 1557017..1558357 1 NC_017856.1 TIGRFAM: integrating conjugative element protein, PFL_4711 family; integrating conjugative element protein 1558357 12843066 Q7C_1550 Methylophaga frappieri integrating conjugative element protein YP_006293386.1 1557017 D 754477 CDS YP_006293387.1 387130497 12843067 1558398..1558715 1 NC_017856.1 hypothetical protein 1558715 12843067 Q7C_1551 Methylophaga frappieri hypothetical protein YP_006293387.1 1558398 D 754477 CDS YP_006293388.1 387130498 12843068 1558732..1560297 1 NC_017856.1 PFAM: TraG-like protein, N-terminal region; TraG-like protein 1560297 12843068 Q7C_1552 Methylophaga frappieri TraG-like protein YP_006293388.1 1558732 D 754477 CDS YP_006293389.1 387130499 12843069 complement(1560294..1560524) 1 NC_017856.1 hypothetical protein 1560524 12843069 Q7C_1553 Methylophaga frappieri hypothetical protein YP_006293389.1 1560294 R 754477 CDS YP_006293390.1 387130500 12843070 complement(1560521..1560691) 1 NC_017856.1 ATPase (AAA+ superfamily) 1560691 12843070 Q7C_1554 Methylophaga frappieri ATPase (AAA+ superfamily) YP_006293390.1 1560521 R 754477 CDS YP_006293391.1 387130501 12843071 complement(1560827..1562347) 1 NC_017856.1 hypothetical protein 1562347 12843071 Q7C_1555 Methylophaga frappieri hypothetical protein YP_006293391.1 1560827 R 754477 CDS YP_006293392.1 387130502 12843072 complement(1562447..1562560) 1 NC_017856.1 hypothetical protein 1562560 12843072 Q7C_1556 Methylophaga frappieri hypothetical protein YP_006293392.1 1562447 R 754477 CDS YP_006293393.1 387130503 12843073 1562650..1562769 1 NC_017856.1 hypothetical protein 1562769 12843073 Q7C_1557 Methylophaga frappieri hypothetical protein YP_006293393.1 1562650 D 754477 CDS YP_006293394.1 387130504 12843074 1562794..1563093 1 NC_017856.1 hypothetical protein 1563093 12843074 Q7C_1558 Methylophaga frappieri hypothetical protein YP_006293394.1 1562794 D 754477 CDS YP_006293395.1 387130505 12843075 complement(1563206..1564972) 1 NC_017856.1 hypothetical protein 1564972 12843075 Q7C_1559 Methylophaga frappieri hypothetical protein YP_006293395.1 1563206 R 754477 CDS YP_006293396.1 387130506 12843076 complement(1565044..1565265) 1 NC_017856.1 hypothetical protein 1565265 12843076 Q7C_1560 Methylophaga frappieri hypothetical protein YP_006293396.1 1565044 R 754477 CDS YP_006293397.1 387130507 12843077 complement(1565366..1566700) 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; two-component, sensor histidine kinase 1566700 12843077 Q7C_1561 Methylophaga frappieri two-component, sensor histidine kinase YP_006293397.1 1565366 R 754477 CDS YP_006293398.1 387130508 12843078 complement(1566763..1567461) 1 NC_017856.1 hypothetical protein 1567461 12843078 Q7C_1562 Methylophaga frappieri hypothetical protein YP_006293398.1 1566763 R 754477 CDS YP_006293399.1 387130509 12843079 1567700..1568428 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component response regulator 1568428 12843079 Q7C_1563 Methylophaga frappieri two-component response regulator YP_006293399.1 1567700 D 754477 CDS YP_006293400.1 387130510 12843080 1568443..1569222 1 NC_017856.1 hypothetical protein 1569222 12843080 Q7C_1564 Methylophaga frappieri hypothetical protein YP_006293400.1 1568443 D 754477 CDS YP_006293401.1 387130511 12843081 1569243..1570451 1 NC_017856.1 hypothetical protein 1570451 12843081 Q7C_1565 Methylophaga frappieri hypothetical protein YP_006293401.1 1569243 D 754477 CDS YP_006293402.1 387130512 12844249 1570453..1571229 1 NC_017856.1 PFAM: Calcineurin-like phosphoesterase; phosphatase 1571229 12844249 Q7C_1566 Methylophaga frappieri phosphatase YP_006293402.1 1570453 D 754477 CDS YP_006293403.1 387130513 12844250 1571280..1573742 1 NC_017856.1 hypothetical protein 1573742 12844250 Q7C_1567 Methylophaga frappieri hypothetical protein YP_006293403.1 1571280 D 754477 CDS YP_006293404.1 387130514 12844251 1573752..1573874 1 NC_017856.1 hypothetical protein 1573874 12844251 Q7C_1568 Methylophaga frappieri hypothetical protein YP_006293404.1 1573752 D 754477 CDS YP_006293405.1 387130515 12844252 1573889..1574845 1 NC_017856.1 PFAM: Sel1 repeat; Sel1 repeat protein 1574845 12844252 Q7C_1569 Methylophaga frappieri Sel1 repeat protein YP_006293405.1 1573889 D 754477 CDS YP_006293406.1 387130516 12844253 complement(1574852..1575712) 1 NC_017856.1 hypothetical protein 1575712 12844253 Q7C_1570 Methylophaga frappieri hypothetical protein YP_006293406.1 1574852 R 754477 CDS YP_006293407.1 387130517 12844254 1575865..1575999 1 NC_017856.1 hypothetical protein 1575999 12844254 Q7C_1571 Methylophaga frappieri hypothetical protein YP_006293407.1 1575865 D 754477 CDS YP_006293408.1 387130518 12844255 1576943..1578403 1 NC_017856.1 hypothetical protein 1578403 12844255 Q7C_1572 Methylophaga frappieri hypothetical protein YP_006293408.1 1576943 D 754477 CDS YP_006293409.1 387130519 12844256 1578589..1580058 1 NC_017856.1 hypothetical protein 1580058 12844256 Q7C_1573 Methylophaga frappieri hypothetical protein YP_006293409.1 1578589 D 754477 CDS YP_006293410.1 387130520 12844257 1580207..1581202 1 NC_017856.1 hypothetical protein 1581202 12844257 Q7C_1574 Methylophaga frappieri hypothetical protein YP_006293410.1 1580207 D 754477 CDS YP_006293411.1 387130521 12844258 complement(1581612..1581956) 1 NC_017856.1 hypothetical protein 1581956 12844258 Q7C_1575 Methylophaga frappieri hypothetical protein YP_006293411.1 1581612 R 754477 CDS YP_006293412.1 387130522 12844259 complement(1581970..1583403) 1 NC_017856.1 hypothetical protein 1583403 12844259 Q7C_1576 Methylophaga frappieri hypothetical protein YP_006293412.1 1581970 R 754477 CDS YP_006293413.1 387130523 12844260 complement(1583413..1583643) 1 NC_017856.1 hypothetical protein 1583643 12844260 Q7C_1577 Methylophaga frappieri hypothetical protein YP_006293413.1 1583413 R 754477 CDS YP_006293414.1 387130524 12844261 complement(1583888..1586107) 1 NC_017856.1 hypothetical protein 1586107 12844261 Q7C_1578 Methylophaga frappieri hypothetical protein YP_006293414.1 1583888 R 754477 CDS YP_006293415.1 387130525 12844262 complement(1587232..1588719) 1 NC_017856.1 PFAM: Putative peptidoglycan binding domain; peptidoglycan binding protein 1588719 12844262 Q7C_1579 Methylophaga frappieri peptidoglycan binding protein YP_006293415.1 1587232 R 754477 CDS YP_006293416.1 387130526 12844263 1589072..1590280 1 NC_017856.1 hypothetical protein 1590280 12844263 Q7C_1580 Methylophaga frappieri hypothetical protein YP_006293416.1 1589072 D 754477 CDS YP_006293417.1 387130527 12844264 1590301..1591191 1 NC_017856.1 Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase 1591191 12844264 Q7C_1581 Methylophaga frappieri Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase YP_006293417.1 1590301 D 754477 CDS YP_006293418.1 387130528 12844265 1591343..1592902 1 NC_017856.1 hypothetical protein 1592902 12844265 Q7C_1582 Methylophaga frappieri hypothetical protein YP_006293418.1 1591343 D 754477 CDS YP_006293419.1 387130529 12844266 complement(1592915..1593109) 1 NC_017856.1 hypothetical protein 1593109 12844266 Q7C_1583 Methylophaga frappieri hypothetical protein YP_006293419.1 1592915 R 754477 CDS YP_006293420.1 387130530 12844267 complement(1593372..1593743) 1 NC_017856.1 XRE family transcriptional regulator 1593743 12844267 Q7C_1584 Methylophaga frappieri XRE family transcriptional regulator YP_006293420.1 1593372 R 754477 CDS YP_006293421.1 387130531 12844268 complement(1593740..1593991) 1 NC_017856.1 PFAM: Plasmid stabilisation system protein; cytotoxic translational repressor of toxin-antitoxin stability system 1593991 12844268 Q7C_1585 Methylophaga frappieri cytotoxic translational repressor of toxin-antitoxin stability system YP_006293421.1 1593740 R 754477 CDS YP_006293422.1 387130532 12844269 1594010..1594216 1 NC_017856.1 hypothetical protein 1594216 12844269 Q7C_1586 Methylophaga frappieri hypothetical protein YP_006293422.1 1594010 D 754477 CDS YP_006293423.1 387130533 12844270 1594581..1595405 1 NC_017856.1 PFAM: Sel1 repeat; Sel1 domain-containing protein repeat-containing protein 1595405 12844270 Q7C_1587 Methylophaga frappieri Sel1 domain-containing protein repeat-containing protein YP_006293423.1 1594581 D 754477 CDS YP_006293424.1 387130534 12844271 1595438..1597738 1 NC_017856.1 PFAM: EAL domain; Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1597738 12844271 Q7C_1588 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293424.1 1595438 D 754477 CDS YP_006293425.1 387130535 12844272 1597828..1598256 1 NC_017856.1 hypothetical protein 1598256 12844272 Q7C_1589 Methylophaga frappieri hypothetical protein YP_006293425.1 1597828 D 754477 CDS YP_006293426.1 387130536 12844273 1598305..1599060 1 NC_017856.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein 1599060 12844273 Q7C_1590 Methylophaga frappieri molybdenum ABC transporter substrate-binding protein YP_006293426.1 1598305 D 754477 CDS YP_006293427.1 387130537 12844274 1599047..1599724 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; TC 3.A.1.8.1; Molybdenum transport system permease ModB 1599724 12844274 Q7C_1591 Methylophaga frappieri Molybdenum transport system permease ModB YP_006293427.1 1599047 D 754477 CDS YP_006293428.1 387130538 12844275 1599721..1600785 1 NC_017856.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein; TC 3.A.1.8.1; Molybdenum transport ATP-binding protein ModC 1600785 12844275 Q7C_1592 Methylophaga frappieri Molybdenum transport ATP-binding protein ModC YP_006293428.1 1599721 D 754477 CDS YP_006293429.1 387130539 12844276 complement(1600800..1601303) 1 NC_017856.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; phosphohistidine phosphatase, SixA 1601303 12844276 Q7C_1593 Methylophaga frappieri phosphohistidine phosphatase, SixA YP_006293429.1 1600800 R 754477 CDS YP_006293430.1 387130540 12844277 complement(1601355..1602815) 1 NC_017856.1 PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating); 6-phosphogluconate dehydrogenase 1602815 12844277 Q7C_1594 Methylophaga frappieri 6-phosphogluconate dehydrogenase YP_006293430.1 1601355 R 754477 CDS YP_006293431.1 387130541 12844278 complement(1602812..1603768) 1 NC_017856.1 PFAM: Nucleotidyltransferase domain; hypothetical protein 1603768 12844278 Q7C_1595 Methylophaga frappieri hypothetical protein YP_006293431.1 1602812 R 754477 CDS YP_006293432.1 387130542 12844279 complement(1603803..1604633) 1 NC_017856.1 PepSY-associated TM helix family protein 1604633 12844279 Q7C_1596 Methylophaga frappieri PepSY-associated TM helix family protein YP_006293432.1 1603803 R 754477 CDS YP_006293433.1 387130543 12844280 complement(1604842..1605069) 1 NC_017856.1 hypothetical protein 1605069 12844280 Q7C_1597 Methylophaga frappieri hypothetical protein YP_006293433.1 1604842 R 754477 CDS YP_006293434.1 387130544 12844281 complement(1605080..1605298) 1 NC_017856.1 hypothetical protein 1605298 12844281 Q7C_1598 Methylophaga frappieri hypothetical protein YP_006293434.1 1605080 R 754477 CDS YP_006293435.1 387130545 12844282 complement(1605340..1605525) 1 NC_017856.1 hypothetical protein 1605525 12844282 Q7C_1599 Methylophaga frappieri hypothetical protein YP_006293435.1 1605340 R 754477 CDS YP_006293436.1 387130546 12844283 complement(1605639..1606154) 1 NC_017856.1 PFAM: Outer membrane lipoprotein Slp family; outer membrane lipoprotein Slp 1606154 12844283 Q7C_1600 Methylophaga frappieri outer membrane lipoprotein Slp YP_006293436.1 1605639 R 754477 CDS YP_006293437.1 387130547 12844284 complement(1606207..1607130) 1 NC_017856.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; 50S ribosomal subunit maturation GTPase RbgA 1607130 12844284 Q7C_1601 Methylophaga frappieri 50S ribosomal subunit maturation GTPase RbgA YP_006293437.1 1606207 R 754477 CDS YP_006293438.1 387130548 12844285 1607317..1607709 1 NC_017856.1 PFAM: Protein of unknown function (DUF454); hypothetical protein 1607709 12844285 Q7C_1602 Methylophaga frappieri hypothetical protein YP_006293438.1 1607317 D 754477 CDS YP_006293439.1 387130549 12844286 1607785..1608129 1 NC_017856.1 PFAM: HopJ type III effector protein; type III effector HopPmaJ 1608129 12844286 Q7C_1603 Methylophaga frappieri type III effector HopPmaJ YP_006293439.1 1607785 D 754477 CDS YP_006293440.1 387130550 12844287 1608276..1609505 1 NC_017856.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-3-phosphoglycerate dehydrogenase 1609505 12844287 Q7C_1604 Methylophaga frappieri D-3-phosphoglycerate dehydrogenase YP_006293440.1 1608276 D 754477 CDS YP_006293441.1 387130551 12844288 complement(1609553..1611253) 1 NC_017856.1 PFAM: D-lactate dehydrogenase, membrane binding; FAD binding domain; D-Lactate dehydrogenase 1611253 12844288 Q7C_1605 Methylophaga frappieri D-Lactate dehydrogenase YP_006293441.1 1609553 R 754477 CDS YP_006293442.1 387130552 12844289 1611368..1612165 1 NC_017856.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 1612165 12844289 Q7C_1606 Methylophaga frappieri undecaprenyl-diphosphatase YP_006293442.1 1611368 D 754477 CDS YP_006293443.1 387130553 12844290 1612252..1612680 1 NC_017856.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 1612680 12844290 Q7C_1607 Methylophaga frappieri 50S ribosomal protein L13 YP_006293443.1 1612252 D 754477 CDS YP_006293444.1 387130554 12844291 1612692..1613081 1 NC_017856.1 PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 1613081 12844291 Q7C_1608 Methylophaga frappieri 30S ribosomal protein S9 YP_006293444.1 1612692 D 754477 CDS YP_006293445.1 387130555 12844292 1613194..1613676 1 NC_017856.1 PFAM: Lipid A 3-O-deacylase (PagL); Lipid A 3-O-deacylase (PagL) 1613676 12844292 Q7C_1609 Methylophaga frappieri Lipid A 3-O-deacylase (PagL) YP_006293445.1 1613194 D 754477 CDS YP_006293446.1 387130556 12844293 complement(1613688..1614608) 1 NC_017856.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; Lipid A biosynthesis lauroyl acyltransferase 1614608 12844293 Q7C_1610 Methylophaga frappieri Lipid A biosynthesis lauroyl acyltransferase YP_006293446.1 1613688 R 754477 CDS YP_006293447.1 387130557 12844294 1614678..1615952 1 NC_017856.1 PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); 3-deoxy-D-manno-octulosonic-acid transferase 1615952 12844294 Q7C_1611 Methylophaga frappieri 3-deoxy-D-manno-octulosonic-acid transferase YP_006293447.1 1614678 D 754477 CDS YP_006293448.1 387130558 12844295 1615963..1616391 1 NC_017856.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; tRNA-specific adenosine-34 deaminase 1616391 12844295 Q7C_1612 Methylophaga frappieri tRNA-specific adenosine-34 deaminase YP_006293448.1 1615963 D 754477 CDS YP_006293449.1 387130559 12844296 1616477..1617892 1 NC_017856.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; Slt family transglycosylase 1617892 12844296 Q7C_1613 Methylophaga frappieri Slt family transglycosylase YP_006293449.1 1616477 D 754477 CDS YP_006293450.1 387130560 12844297 complement(1617941..1618573) 1 NC_017856.1 PFAM: DSBA-like thioredoxin domain; Periplasmic thiol:disulfide interchange protein DsbA 1618573 12844297 Q7C_1614 Methylophaga frappieri Periplasmic thiol:disulfide interchange protein DsbA YP_006293450.1 1617941 R 754477 CDS YP_006293451.1 387130561 12844298 complement(1618591..1619736) 1 NC_017856.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; Cytochrome c-type biogenesis protein CcsA/ResC 1619736 12844298 Q7C_1615 Methylophaga frappieri Cytochrome c-type biogenesis protein CcsA/ResC YP_006293451.1 1618591 R 754477 CDS YP_006293452.1 387130562 12844299 complement(1619795..1621768) 1 NC_017856.1 PFAM: ResB-like family; Cytochrome c-type biogenesis protein Ccs1/ResB 1621768 12844299 Q7C_1616 Methylophaga frappieri Cytochrome c-type biogenesis protein Ccs1/ResB YP_006293452.1 1619795 R 754477 CDS YP_006293453.1 387130563 12844300 complement(1621866..1622474) 1 NC_017856.1 PFAM: Cytochrome c; cytochrome c4 1622474 12844300 Q7C_1617 Methylophaga frappieri cytochrome c4 YP_006293453.1 1621866 R 754477 CDS YP_006293454.1 387130564 12844301 1622561..1623181 1 NC_017856.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; GTP-binding protein EngB 1623181 12844301 Q7C_1618 Methylophaga frappieri GTP-binding protein EngB YP_006293454.1 1622561 D 754477 CDS YP_006293455.1 387130565 12844302 1623262..1623450 1 NC_017856.1 hypothetical protein 1623450 12844302 Q7C_1619 Methylophaga frappieri hypothetical protein YP_006293455.1 1623262 D 754477 CDS YP_006293456.1 387130566 12844303 1623599..1626103 1 NC_017856.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase 1626103 12844303 Q7C_1620 Methylophaga frappieri glycogen phosphorylase YP_006293456.1 1623599 D 754477 CDS YP_006293457.1 387130567 12844305 complement(1626479..1626865) 1 NC_017856.1 PFAM: Calcium/calmodulin dependent protein kinase II Association; hypothetical protein 1626865 12844305 Q7C_1622 Methylophaga frappieri hypothetical protein YP_006293457.1 1626479 R 754477 CDS YP_006293458.1 387130568 12844306 1627462..1630818 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; Bacterial signalling protein N terminal repeat; TIGRFAM: PAS domain S-box; hypothetical protein 1630818 12844306 Q7C_1623 Methylophaga frappieri hypothetical protein YP_006293458.1 1627462 D 754477 CDS YP_006293459.1 387130569 12844307 1630822..1631814 1 NC_017856.1 PFAM: HD domain; Response regulator receiver domain; response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein 1631814 12844307 Q7C_1624 Methylophaga frappieri response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein YP_006293459.1 1630822 D 754477 CDS YP_006293460.1 387130570 12844308 1632131..1632763 1 NC_017856.1 PFAM: Protein of unknown function (DUF2927); hypothetical protein 1632763 12844308 Q7C_1625 Methylophaga frappieri hypothetical protein YP_006293460.1 1632131 D 754477 CDS YP_006293461.1 387130571 12844309 complement(1632819..1633664) 1 NC_017856.1 PFAM: OmpA family; Outer membrane protein A precursor 1633664 12844309 Q7C_1626 Methylophaga frappieri Outer membrane protein A precursor YP_006293461.1 1632819 R 754477 CDS YP_006293462.1 387130572 12844310 complement(1633826..1634971) 1 NC_017856.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT 1634971 12844310 Q7C_1627 Methylophaga frappieri Twitching motility protein PilT YP_006293462.1 1633826 R 754477 CDS YP_006293463.1 387130573 12844311 complement(1634984..1636021) 1 NC_017856.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; Twitching motility protein PilT 1636021 12844311 Q7C_1628 Methylophaga frappieri Twitching motility protein PilT YP_006293463.1 1634984 R 754477 CDS YP_006293464.1 387130574 12844312 1636104..1636799 1 NC_017856.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate protein 1636799 12844312 Q7C_1629 Methylophaga frappieri pyridoxal phosphate protein YP_006293464.1 1636104 D 754477 CDS YP_006293465.1 387130575 12844313 1636840..1637676 1 NC_017856.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; Pyrroline-5-carboxylate reductase 1637676 12844313 Q7C_1630 Methylophaga frappieri Pyrroline-5-carboxylate reductase YP_006293465.1 1636840 D 754477 CDS YP_006293466.1 387130576 12844314 1637666..1638244 1 NC_017856.1 PFAM: YGGT family; Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 1638244 12844314 Q7C_1631 Methylophaga frappieri Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) YP_006293466.1 1637666 D 754477 CDS YP_006293467.1 387130577 12844315 1638300..1639448 1 NC_017856.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine O-acetyltransferase 1639448 12844315 Q7C_1632 Methylophaga frappieri homoserine O-acetyltransferase YP_006293467.1 1638300 D 754477 CDS YP_006293468.1 387130578 12844316 1639448..1640050 1 NC_017856.1 PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; homoserine O-acetyltransferase 1640050 12844316 Q7C_1633 Methylophaga frappieri homoserine O-acetyltransferase YP_006293468.1 1639448 D 754477 CDS YP_006293469.1 387130579 12844317 1640047..1640688 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1640688 12844317 Q7C_1634 Methylophaga frappieri orotate phosphoribosyltransferase YP_006293469.1 1640047 D 754477 CDS YP_006293470.1 387130580 12844318 complement(1640685..1641446) 1 NC_017856.1 PFAM: Sulfite exporter TauE/SafE; permease 1641446 12844318 Q7C_1635 Methylophaga frappieri permease YP_006293470.1 1640685 R 754477 CDS YP_006293471.1 387130581 12844319 1641479..1642144 1 NC_017856.1 hypothetical protein 1642144 12844319 Q7C_1636 Methylophaga frappieri hypothetical protein YP_006293471.1 1641479 D 754477 CDS YP_006293472.1 387130582 12844320 complement(1642141..1643151) 1 NC_017856.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1643151 12844320 Q7C_1637 Methylophaga frappieri histidinol-phosphate aminotransferase YP_006293472.1 1642141 R 754477 CDS YP_006293473.1 387130583 12844321 complement(1643196..1644497) 1 NC_017856.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 1644497 12844321 Q7C_1638 Methylophaga frappieri histidinol dehydrogenase YP_006293473.1 1643196 R 754477 CDS YP_006293474.1 387130584 12844322 complement(1644490..1645134) 1 NC_017856.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit 1645134 12844322 Q7C_1639 Methylophaga frappieri ATP phosphoribosyltransferase catalytic subunit YP_006293474.1 1644490 R 754477 CDS YP_006293475.1 387130585 12844323 complement(1645127..1646413) 1 NC_017856.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1646413 12844323 Q7C_1640 Methylophaga frappieri UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006293475.1 1645127 R 754477 CDS YP_006293476.1 387130586 12844324 complement(1646441..1646665) 1 NC_017856.1 PFAM: BolA-like protein; BolA superfamily transcriptional regulator 1646665 12844324 Q7C_1641 Methylophaga frappieri BolA superfamily transcriptional regulator YP_006293476.1 1646441 R 754477 CDS YP_006293477.1 387130587 12844325 complement(1646668..1646967) 1 NC_017856.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; NTP binding protein (contains STAS domain) 1646967 12844325 Q7C_1642 Methylophaga frappieri NTP binding protein (contains STAS domain) YP_006293477.1 1646668 R 754477 CDS YP_006293478.1 387130588 12844326 complement(1646964..1647602) 1 NC_017856.1 PFAM: Toluene tolerance, Ttg2; toluene tolerance protein 1647602 12844326 Q7C_1643 Methylophaga frappieri toluene tolerance protein YP_006293478.1 1646964 R 754477 CDS YP_006293479.1 387130589 12844327 complement(1647605..1648069) 1 NC_017856.1 PFAM: mce related protein; ABC transporter 1648069 12844327 Q7C_1644 Methylophaga frappieri ABC transporter YP_006293479.1 1647605 R 754477 CDS YP_006293480.1 387130590 12844328 complement(1648073..1648849) 1 NC_017856.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; ABC transporter, permease component YrbE 1648849 12844328 Q7C_1645 Methylophaga frappieri ABC transporter, permease component YrbE YP_006293480.1 1648073 R 754477 CDS YP_006293481.1 387130591 12844329 complement(1648846..1649652) 1 NC_017856.1 PFAM: ABC transporter; ABC transporter, ATP-binding protein YrbF 1649652 12844329 Q7C_1646 Methylophaga frappieri ABC transporter, ATP-binding protein YrbF YP_006293481.1 1648846 R 754477 CDS YP_006293482.1 387130592 12844330 1649866..1650429 1 NC_017856.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD gene product 1650429 12844330 Q7C_1647 Methylophaga frappieri MxaD gene product YP_006293482.1 1649866 D 754477 CDS YP_006293483.1 387130593 12844331 1650473..1651417 1 NC_017856.1 PFAM: Cytochrome D1 heme domain; TIGRFAM: 40-residue YVTN family beta-propeller repeat; YVTN family beta-propeller domain-containing protein 1651417 12844331 Q7C_1648 Methylophaga frappieri YVTN family beta-propeller domain-containing protein YP_006293483.1 1650473 D 754477 CDS YP_006293484.1 387130594 12844332 1651417..1652178 1 NC_017856.1 PFAM: Protein of unknown function (DUF548); N6-adenine-specific methylase 1652178 12844332 Q7C_1649 Methylophaga frappieri N6-adenine-specific methylase YP_006293484.1 1651417 D 754477 CDS YP_006293485.1 387130595 12844333 complement(1652175..1653506) 1 NC_017856.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase 1653506 12844333 Q7C_1650 Methylophaga frappieri Holliday junction DNA helicase YP_006293485.1 1652175 R 754477 CDS YP_006293486.1 387130596 12844334 complement(1653507..1654142) 1 NC_017856.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; Outer membrane lipoprotein carrier protein LolA 1654142 12844334 Q7C_1651 Methylophaga frappieri Outer membrane lipoprotein carrier protein LolA YP_006293486.1 1653507 R 754477 CDS YP_006293487.1 387130597 12844335 complement(1654204..1656504) 1 NC_017856.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK 1656504 12844335 Q7C_1652 Methylophaga frappieri cell division protein FtsK YP_006293487.1 1654204 R 754477 CDS YP_006293488.1 387130598 12844336 1656637..1657575 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 1657575 12844336 Q7C_1653 Methylophaga frappieri thioredoxin reductase YP_006293488.1 1656637 D 754477 CDS YP_006293489.1 387130599 12844337 1657625..1658068 1 NC_017856.1 PFAM: Universal stress protein family; Universal stress protein 1658068 12844337 Q7C_1654 Methylophaga frappieri Universal stress protein YP_006293489.1 1657625 D 754477 CDS YP_006293490.1 387130600 12844338 1658075..1659331 1 NC_017856.1 PFAM: Major Facilitator Superfamily; long-chain-fatty-acid--CoA ligase 1659331 12844338 Q7C_1655 Methylophaga frappieri long-chain-fatty-acid--CoA ligase YP_006293490.1 1658075 D 754477 CDS YP_006293491.1 387130601 12844339 1659388..1660455 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1660455 12844339 Q7C_1656 Methylophaga frappieri diguanylate cyclase YP_006293491.1 1659388 D 754477 CDS YP_006293492.1 387130602 12844340 complement(1660511..1661755) 1 NC_017856.1 PFAM: Peptidase family M48; hypothetical protein 1661755 12844340 Q7C_1657 Methylophaga frappieri hypothetical protein YP_006293492.1 1660511 R 754477 CDS YP_006293493.1 387130603 12844341 1661859..1662410 1 NC_017856.1 PFAM: Exonuclease; 3'-to-5' oligoribonuclease 1662410 12844341 Q7C_1658 Methylophaga frappieri 3'-to-5' oligoribonuclease YP_006293493.1 1661859 D 754477 CDS YP_006293494.1 387130604 12844342 1662631..1664094 1 NC_017856.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon 1664094 12844342 Q7C_1659 Methylophaga frappieri DNA polymerase III subunit epsilon YP_006293494.1 1662631 D 754477 CDS YP_006293495.1 387130605 12844343 1664101..1665630 1 NC_017856.1 PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; alpha-deoxyribodipyrimidine photolyase-like protein 1665630 12844343 Q7C_1660 Methylophaga frappieri alpha-deoxyribodipyrimidine photolyase-like protein YP_006293495.1 1664101 D 754477 CDS YP_006293496.1 387130606 12844344 1665640..1667037 1 NC_017856.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; Deoxyribodipyrimidine photolyase 1667037 12844344 Q7C_1661 Methylophaga frappieri Deoxyribodipyrimidine photolyase YP_006293496.1 1665640 D 754477 CDS YP_006293497.1 387130607 12844345 complement(1667064..1667573) 1 NC_017856.1 PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain; flavodoxin 1667573 12844345 Q7C_1662 Methylophaga frappieri flavodoxin YP_006293497.1 1667064 R 754477 CDS YP_006293498.1 387130608 12844346 complement(1667743..1668180) 1 NC_017856.1 hypothetical protein 1668180 12844346 Q7C_1663 Methylophaga frappieri hypothetical protein YP_006293498.1 1667743 R 754477 CDS YP_006293499.1 387130609 12844347 complement(1668406..1670295) 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF839); phosphatase 1670295 12844347 Q7C_1664 Methylophaga frappieri phosphatase YP_006293499.1 1668406 R 754477 CDS YP_006293500.1 387130610 12844348 complement(1670365..1671435) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Epoxyqueuosine (oQ) reductase QueG 1671435 12844348 Q7C_1665 Methylophaga frappieri Epoxyqueuosine (oQ) reductase QueG YP_006293500.1 1670365 R 754477 CDS YP_006293501.1 387130611 12844349 1671481..1672971 1 NC_017856.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein 1672971 12844349 Q7C_1666 Methylophaga frappieri yjeF-like protein YP_006293501.1 1671481 D 754477 CDS YP_006293502.1 387130612 12844350 1672971..1673426 1 NC_017856.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; ATPase 1673426 12844350 Q7C_1667 Methylophaga frappieri ATPase YP_006293502.1 1672971 D 754477 CDS YP_006293503.1 387130613 12844351 1673527..1674858 1 NC_017856.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain; N-acetylmuramoyl-L-alanine amidase 1674858 12844351 Q7C_1668 Methylophaga frappieri N-acetylmuramoyl-L-alanine amidase YP_006293503.1 1673527 D 754477 CDS YP_006293504.1 387130614 12844352 1674978..1676627 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 1676627 12844352 Q7C_1669 Methylophaga frappieri DNA mismatch repair protein MutL YP_006293504.1 1674978 D 754477 CDS YP_006293505.1 387130615 12844353 1676653..1677768 1 NC_017856.1 hypothetical protein 1677768 12844353 Q7C_1670 Methylophaga frappieri hypothetical protein YP_006293505.1 1676653 D 754477 CDS YP_006293506.1 387130616 12844354 complement(1677826..1680945) 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA 1680945 12844354 Q7C_1671 Methylophaga frappieri Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA YP_006293506.1 1677826 R 754477 CDS YP_006293507.1 387130617 12844355 complement(1680993..1682069) 1 NC_017856.1 hypothetical protein 1682069 12844355 Q7C_1672 Methylophaga frappieri hypothetical protein YP_006293507.1 1680993 R 754477 CDS YP_006293508.1 387130618 12844357 1682636..1683826 1 NC_017856.1 hypothetical protein 1683826 12844357 Q7C_1674 Methylophaga frappieri hypothetical protein YP_006293508.1 1682636 D 754477 CDS YP_006293509.1 387130619 12844358 1683963..1684595 1 NC_017856.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL 1684595 12844358 Q7C_1675 Methylophaga frappieri Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL YP_006293509.1 1683963 D 754477 CDS YP_006293510.1 387130620 12844359 complement(1684599..1685588) 1 NC_017856.1 PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK 1685588 12844359 Q7C_1676 Methylophaga frappieri Phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK YP_006293510.1 1684599 R 754477 CDS YP_006293511.1 387130621 12844360 complement(1685600..1686442) 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD superfamily sugar phosphatase 1686442 12844360 Q7C_1677 Methylophaga frappieri HAD superfamily sugar phosphatase YP_006293511.1 1685600 R 754477 CDS YP_006293512.1 387130622 12844361 complement(1686426..1686632) 1 NC_017856.1 hypothetical protein 1686632 12844361 Q7C_1678 Methylophaga frappieri hypothetical protein YP_006293512.1 1686426 R 754477 CDS YP_006293513.1 387130623 12844362 1686639..1687280 1 NC_017856.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 1687280 12844362 Q7C_1679 Methylophaga frappieri D-arabino-3-hexulose 6-phosphate formaldehyde lyase YP_006293513.1 1686639 D 754477 CDS YP_006293514.1 387130624 12844363 1687556..1687861 1 NC_017856.1 hypothetical protein 1687861 12844363 Q7C_1680 Methylophaga frappieri hypothetical protein YP_006293514.1 1687556 D 754477 CDS YP_006293515.1 387130625 12844364 1688009..1688992 1 NC_017856.1 PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase 1688992 12844364 Q7C_1681 Methylophaga frappieri transaldolase YP_006293515.1 1688009 D 754477 CDS YP_006293516.1 387130626 12844365 1689137..1689772 1 NC_017856.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 1689772 12844365 Q7C_1682 Methylophaga frappieri D-arabino-3-hexulose 6-phosphate formaldehyde lyase YP_006293516.1 1689137 D 754477 CDS YP_006293517.1 387130627 12844366 1689797..1690330 1 NC_017856.1 PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; 6-phospho 3-hexuloisomerase 1690330 12844366 Q7C_1683 Methylophaga frappieri 6-phospho 3-hexuloisomerase YP_006293517.1 1689797 D 754477 CDS YP_006293518.1 387130628 12844367 1690477..1691883 1 NC_017856.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 1691883 12844367 Q7C_1684 Methylophaga frappieri 3-isopropylmalate dehydratase large subunit YP_006293518.1 1690477 D 754477 CDS YP_006293519.1 387130629 12844368 1691880..1692806 1 NC_017856.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases; protein-N(5)-glutamine methyltransferase PrmB 1692806 12844368 Q7C_1685 Methylophaga frappieri protein-N(5)-glutamine methyltransferase PrmB YP_006293519.1 1691880 D 754477 CDS YP_006293520.1 387130630 12844369 complement(1692803..1694107) 1 NC_017856.1 PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; Pas 1694107 12844369 Q7C_1686 Methylophaga frappieri Pas YP_006293520.1 1692803 R 754477 CDS YP_006293521.1 387130631 12844370 complement(1694152..1694871) 1 NC_017856.1 PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH; DNA mismatch repair endonuclease MutH 1694871 12844370 Q7C_1687 Methylophaga frappieri DNA mismatch repair endonuclease MutH YP_006293521.1 1694152 R 754477 CDS YP_006293522.1 387130632 12844371 1694894..1695817 1 NC_017856.1 PFAM: ABC transporter; ATP-binding component of ABC transport system 1695817 12844371 Q7C_1688 Methylophaga frappieri ATP-binding component of ABC transport system YP_006293522.1 1694894 D 754477 CDS YP_006293523.1 387130633 12844372 1695814..1696596 1 NC_017856.1 PFAM: ABC-2 type transporter; multidrug ABC transporter permease 1696596 12844372 Q7C_1689 Methylophaga frappieri multidrug ABC transporter permease YP_006293523.1 1695814 D 754477 CDS YP_006293524.1 387130634 12844373 complement(1696600..1697577) 1 NC_017856.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A; tRNA dihydrouridine synthase A 1697577 12844373 Q7C_1690 Methylophaga frappieri tRNA dihydrouridine synthase A YP_006293524.1 1696600 R 754477 CDS YP_006293525.1 387130635 12844374 1697633..1698343 1 NC_017856.1 PFAM: Protein of unknown function DUF45; metal-dependent hydrolase 1698343 12844374 Q7C_1691 Methylophaga frappieri metal-dependent hydrolase YP_006293525.1 1697633 D 754477 CDS YP_006293526.1 387130636 12844375 1698563..1699726 1 NC_017856.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 1699726 12844375 Q7C_1692 Methylophaga frappieri S-adenosylmethionine synthetase YP_006293526.1 1698563 D 754477 CDS YP_006293527.1 387130637 12844376 1699748..1701064 1 NC_017856.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase 1701064 12844376 Q7C_1693 Methylophaga frappieri adenosylhomocysteinase YP_006293527.1 1699748 D 754477 CDS YP_006293528.1 387130638 12844377 1701121..1701975 1 NC_017856.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 1701975 12844377 Q7C_1694 Methylophaga frappieri 5,10-methylenetetrahydrofolate reductase YP_006293528.1 1701121 D 754477 CDS YP_006293529.1 387130639 12844378 1702151..1703569 1 NC_017856.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor RpoN 1703569 12844378 Q7C_1695 Methylophaga frappieri RNA polymerase sigma-54 factor RpoN YP_006293529.1 1702151 D 754477 CDS YP_006293530.1 387130640 12844379 1703604..1703930 1 NC_017856.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; Ribosome hibernation protein YhbH 1703930 12844379 Q7C_1696 Methylophaga frappieri Ribosome hibernation protein YhbH YP_006293530.1 1703604 D 754477 CDS YP_006293531.1 387130641 12844380 1703941..1704402 1 NC_017856.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system nitrogen-specific transporter subunit IIA PtsN 1704402 12844380 Q7C_1697 Methylophaga frappieri PTS system nitrogen-specific transporter subunit IIA PtsN YP_006293531.1 1703941 D 754477 CDS YP_006293532.1 387130642 12844381 1704407..1704889 1 NC_017856.1 PFAM: HPr Serine kinase C-terminal domain; serine kinase of the HPr protein( ) 1704889 12844381 Q7C_1698 Methylophaga frappieri serine kinase of the HPr protein( ) YP_006293532.1 1704407 D 754477 CDS YP_006293533.1 387130643 12844382 1704988..1705392 1 NC_017856.1 PFAM: PTS system fructose IIA component; PTS system fructose subfamily transporter subunit IIA 1705392 12844382 Q7C_1699 Methylophaga frappieri PTS system fructose subfamily transporter subunit IIA YP_006293533.1 1704988 D 754477 CDS YP_006293534.1 387130644 12844383 1705389..1705658 1 NC_017856.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; Phosphocarrier protein, nitrogen regulation associated 1705658 12844383 Q7C_1700 Methylophaga frappieri Phosphocarrier protein, nitrogen regulation associated YP_006293534.1 1705389 D 754477 CDS YP_006293535.1 387130645 12844384 1705655..1707409 1 NC_017856.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system phosphoenolpyruvate-protein phosphotransferase 1707409 12844384 Q7C_1701 Methylophaga frappieri PTS system phosphoenolpyruvate-protein phosphotransferase YP_006293535.1 1705655 D 754477 CDS YP_006293536.1 387130646 12844385 1707495..1708853 1 NC_017856.1 PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); Magnesium transporter 1708853 12844385 Q7C_1702 Methylophaga frappieri Magnesium transporter YP_006293536.1 1707495 D 754477 CDS YP_006293537.1 387130647 12844386 1708875..1709966 1 NC_017856.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; Chorismate synthase 1709966 12844386 Q7C_1703 Methylophaga frappieri Chorismate synthase YP_006293537.1 1708875 D 754477 CDS YP_006293538.1 387130648 12844387 1710073..1711137 1 NC_017856.1 PFAM: Nucleoside H+ symporter; Nucleoside:H+ symporter:Major facilitator superfamily 1711137 12844387 Q7C_1704 Methylophaga frappieri Nucleoside:H+ symporter:Major facilitator superfamily YP_006293538.1 1710073 D 754477 CDS YP_006293539.1 387130649 12844388 1711273..1712628 1 NC_017856.1 PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A 1712628 12844388 Q7C_1705 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit A YP_006293539.1 1711273 D 754477 CDS YP_006293540.1 387130650 12844389 1712632..1713840 1 NC_017856.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; Na(+)-translocating NADH-quinone reductase subunit B 1713840 12844389 Q7C_1706 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit B YP_006293540.1 1712632 D 754477 CDS YP_006293541.1 387130651 12844390 1713884..1714669 1 NC_017856.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; Na(+)-translocating NADH-quinone reductase subunit C 1714669 12844390 Q7C_1707 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit C YP_006293541.1 1713884 D 754477 CDS YP_006293542.1 387130652 12844391 1714669..1715331 1 NC_017856.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit D 1715331 12844391 Q7C_1708 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit D YP_006293542.1 1714669 D 754477 CDS YP_006293543.1 387130653 12844392 1715332..1715940 1 NC_017856.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; Na(+)-translocating NADH-quinone reductase subunit E 1715940 12844392 Q7C_1709 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit E YP_006293543.1 1715332 D 754477 CDS YP_006293544.1 387130654 12844393 1715940..1717157 1 NC_017856.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; Na(+)-translocating NADH-quinone reductase subunit F 1717157 12844393 Q7C_1710 Methylophaga frappieri Na(+)-translocating NADH-quinone reductase subunit F YP_006293544.1 1715940 D 754477 CDS YP_006293545.1 387130655 12844394 1717158..1717355 1 NC_017856.1 PFAM: Protein of unknown function (DUF539); exported or periplasmic protein in ApbE locus 1717355 12844394 Q7C_1711 Methylophaga frappieri exported or periplasmic protein in ApbE locus YP_006293545.1 1717158 D 754477 CDS YP_006293546.1 387130656 12844395 1717379..1717843 1 NC_017856.1 PFAM: CBS domain; hypothetical protein 1717843 12844395 Q7C_1712 Methylophaga frappieri hypothetical protein YP_006293546.1 1717379 D 754477 CDS YP_006293547.1 387130657 12844396 1717945..1718901 1 NC_017856.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 1718901 12844396 Q7C_1713 Methylophaga frappieri cysteine synthase YP_006293547.1 1717945 D 754477 CDS YP_006293548.1 387130658 12844397 1719195..1719710 1 NC_017856.1 PFAM: Peptidase S24-like; Error-prone repair protein UmuD 1719710 12844397 Q7C_1714 Methylophaga frappieri Error-prone repair protein UmuD YP_006293548.1 1719195 D 754477 CDS YP_006293549.1 387130659 12844398 1719712..1720998 1 NC_017856.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) 1720998 12844398 Q7C_1715 Methylophaga frappieri Error-prone, lesion bypass DNA polymerase V (UmuC) YP_006293549.1 1719712 D 754477 CDS YP_006293550.1 387130660 12844399 1721071..1721379 1 NC_017856.1 PFAM: Transposase; transposase IS3/IS911 1721379 12844399 Q7C_1716 Methylophaga frappieri transposase IS3/IS911 YP_006293550.1 1721071 D 754477 CDS YP_006293551.1 387130661 12844400 1721478..1721795 1 NC_017856.1 ISPsy13, transposase OrfB 1721795 12844400 Q7C_1717 Methylophaga frappieri ISPsy13, transposase OrfB YP_006293551.1 1721478 D 754477 CDS YP_006293552.1 387130662 12844407 complement(1727803..1728474) 1 NC_017856.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; queuosine biosynthesis protein QueC 1728474 12844407 Q7C_1724 Methylophaga frappieri queuosine biosynthesis protein QueC YP_006293552.1 1727803 R 754477 CDS YP_006293553.1 387130663 12844408 complement(1728474..1729115) 1 NC_017856.1 PFAM: Radical SAM superfamily; queuosine biosynthesis radical SAM protein QueE 1729115 12844408 Q7C_1725 Methylophaga frappieri queuosine biosynthesis radical SAM protein QueE YP_006293553.1 1728474 R 754477 CDS YP_006293554.1 387130664 12844409 complement(1729135..1729950) 1 NC_017856.1 TIGRFAM: tol-pal system protein YbgF; hypothetical protein 1729950 12844409 Q7C_1726 Methylophaga frappieri hypothetical protein YP_006293554.1 1729135 R 754477 CDS YP_006293555.1 387130665 12844410 complement(1729951..1730526) 1 NC_017856.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; 18K peptidoglycan-associated outer membrane lipoprotein 1730526 12844410 Q7C_1727 Methylophaga frappieri 18K peptidoglycan-associated outer membrane lipoprotein YP_006293555.1 1729951 R 754477 CDS YP_006293556.1 387130666 12844411 complement(1730550..1731851) 1 NC_017856.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; tolB protein precursor 1731851 12844411 Q7C_1728 Methylophaga frappieri tolB protein precursor YP_006293556.1 1730550 R 754477 CDS YP_006293557.1 387130667 12844412 complement(1731863..1733113) 1 NC_017856.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TonB 1733113 12844412 Q7C_1729 Methylophaga frappieri TonB YP_006293557.1 1731863 R 754477 CDS YP_006293558.1 387130668 12844413 complement(1733132..1733569) 1 NC_017856.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; Tol biopolymer transport system, TolR protein 1733569 12844413 Q7C_1730 Methylophaga frappieri Tol biopolymer transport system, TolR protein YP_006293558.1 1733132 R 754477 CDS YP_006293559.1 387130669 12844414 complement(1733584..1734252) 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; MotA/TolQ/ExbB proton channel family protein 1734252 12844414 Q7C_1731 Methylophaga frappieri MotA/TolQ/ExbB proton channel family protein YP_006293559.1 1733584 R 754477 CDS YP_006293560.1 387130670 12844415 complement(1734242..1734559) 1 NC_017856.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 1734559 12844415 Q7C_1732 Methylophaga frappieri 4-hydroxybenzoyl-CoA thioesterase YP_006293560.1 1734242 R 754477 CDS YP_006293561.1 387130671 12844416 complement(1734646..1735662) 1 NC_017856.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase RuvB 1735662 12844416 Q7C_1733 Methylophaga frappieri Holliday junction DNA helicase RuvB YP_006293561.1 1734646 R 754477 CDS YP_006293562.1 387130672 12844417 complement(1735662..1736258) 1 NC_017856.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase RuvA 1736258 12844417 Q7C_1734 Methylophaga frappieri Holliday junction DNA helicase RuvA YP_006293562.1 1735662 R 754477 CDS YP_006293563.1 387130673 12844418 complement(1736255..1736791) 1 NC_017856.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease RuvC 1736791 12844418 Q7C_1735 Methylophaga frappieri Crossover junction endodeoxyribonuclease RuvC YP_006293563.1 1736255 R 754477 CDS YP_006293564.1 387130674 12844419 complement(1736805..1737554) 1 NC_017856.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; YebC/PmpR family DNA-binding regulatory protein 1737554 12844419 Q7C_1736 Methylophaga frappieri YebC/PmpR family DNA-binding regulatory protein YP_006293564.1 1736805 R 754477 CDS YP_006293565.1 387130675 12844420 complement(1737582..1738511) 1 NC_017856.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase 1738511 12844420 Q7C_1737 Methylophaga frappieri branched-chain amino acid aminotransferase YP_006293565.1 1737582 R 754477 CDS YP_006293566.1 387130676 12844421 complement(1738543..1741347) 1 NC_017856.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase 1741347 12844421 Q7C_1738 Methylophaga frappieri glutamate-ammonia-ligase adenylyltransferase YP_006293566.1 1738543 R 754477 CDS YP_006293567.1 387130677 12844422 complement(1741362..1741475) 1 NC_017856.1 hypothetical protein 1741475 12844422 Q7C_1739 Methylophaga frappieri hypothetical protein YP_006293567.1 1741362 R 754477 CDS YP_006293568.1 387130678 12844423 1741519..1742139 1 NC_017856.1 PFAM: Alternative oxidase; oxidase 1742139 12844423 Q7C_1740 Methylophaga frappieri oxidase YP_006293568.1 1741519 D 754477 CDS YP_006293569.1 387130679 12844424 1742198..1742560 1 NC_017856.1 hypothetical protein 1742560 12844424 Q7C_1741 Methylophaga frappieri hypothetical protein YP_006293569.1 1742198 D 754477 CDS YP_006293570.1 387130680 12844425 complement(1743048..1744679) 1 NC_017856.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; Heat shock protein 60 family chaperone GroEL 1744679 12844425 Q7C_1742 Methylophaga frappieri Heat shock protein 60 family chaperone GroEL YP_006293570.1 1743048 R 754477 CDS YP_006293571.1 387130681 12844426 complement(1744743..1745033) 1 NC_017856.1 PFAM: Chaperonin 10 Kd subunit; Heat shock protein 60 family co-chaperone GroES 1745033 12844426 Q7C_1743 Methylophaga frappieri Heat shock protein 60 family co-chaperone GroES YP_006293571.1 1744743 R 754477 CDS YP_006293572.1 387130682 12844427 complement(1745145..1745594) 1 NC_017856.1 PFAM: FxsA cytoplasmic membrane protein; FxsA protein 1745594 12844427 Q7C_1744 Methylophaga frappieri FxsA protein YP_006293572.1 1745145 R 754477 CDS YP_006293573.1 387130683 12844428 1745821..1747203 1 NC_017856.1 PFAM: Phosphate-selective porin O and P; Phosphate-specific outer membrane porin OprP, Pyrophosphate-specific outer membrane porin OprO 1747203 12844428 Q7C_1745 Methylophaga frappieri Phosphate-specific outer membrane porin OprP, Pyrophosphate-specific outer membrane porin OprO YP_006293573.1 1745821 D 754477 CDS YP_006293574.1 387130684 12844429 1747271..1749100 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1749100 12844429 Q7C_1746 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293574.1 1747271 D 754477 CDS YP_006293575.1 387130685 12844430 complement(1749059..1749448) 1 NC_017856.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); Arsenate reductase 1749448 12844430 Q7C_1747 Methylophaga frappieri Arsenate reductase YP_006293575.1 1749059 R 754477 CDS YP_006293576.1 387130686 12844431 1749671..1750342 1 NC_017856.1 PFAM: Bacterial SH3 domain; SH3 domain-containing protein 1750342 12844431 Q7C_1748 Methylophaga frappieri SH3 domain-containing protein YP_006293576.1 1749671 D 754477 CDS YP_006293577.1 387130687 12844432 complement(1750369..1750887) 1 NC_017856.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase-like protein 1750887 12844432 Q7C_1749 Methylophaga frappieri Pyridoxamine 5'-phosphate oxidase-like protein YP_006293577.1 1750369 R 754477 CDS YP_006293578.1 387130688 12844433 complement(1750884..1751282) 1 NC_017856.1 PFAM: ChuX-like family; TIGRFAM: putative heme utilization carrier protein HutX; heme iron utilization protein 1751282 12844433 Q7C_1750 Methylophaga frappieri heme iron utilization protein YP_006293578.1 1750884 R 754477 CDS YP_006293579.1 387130689 12844434 complement(1751304..1753340) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent hemin , ferrichrome receptor 1753340 12844434 Q7C_1751 Methylophaga frappieri TonB-dependent hemin , ferrichrome receptor YP_006293579.1 1751304 R 754477 CDS YP_006293580.1 387130690 12844435 1753489..1754334 1 NC_017856.1 PFAM: Periplasmic binding protein; Periplasmic hemin-binding protein 1754334 12844435 Q7C_1752 Methylophaga frappieri Periplasmic hemin-binding protein YP_006293580.1 1753489 D 754477 CDS YP_006293581.1 387130691 12844436 1754341..1755384 1 NC_017856.1 PFAM: FecCD transport family; Hemin ABC transporter, permease protein 1755384 12844436 Q7C_1753 Methylophaga frappieri Hemin ABC transporter, permease protein YP_006293581.1 1754341 D 754477 CDS YP_006293582.1 387130692 12844437 1755387..1756154 1 NC_017856.1 PFAM: ABC transporter; hemin ABC transporter ATPase 1756154 12844437 Q7C_1754 Methylophaga frappieri hemin ABC transporter ATPase YP_006293582.1 1755387 D 754477 CDS YP_006293583.1 387130693 12844438 1756180..1756842 1 NC_017856.1 PFAM: ABC transporter transmembrane region; ATP-binding/permease fusion ABC transporter 1756842 12844438 Q7C_1755 Methylophaga frappieri ATP-binding/permease fusion ABC transporter YP_006293583.1 1756180 D 754477 CDS YP_006293584.1 387130694 12844439 1756839..1757963 1 NC_017856.1 PFAM: ABC transporter; Lipid A export ATP-binding/permease MsbA 1757963 12844439 Q7C_1756 Methylophaga frappieri Lipid A export ATP-binding/permease MsbA YP_006293584.1 1756839 D 754477 CDS YP_006293585.1 387130695 12844440 complement(1757960..1759813) 1 NC_017856.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Dihydroxy-acid dehydratase 1759813 12844440 Q7C_1757 Methylophaga frappieri Dihydroxy-acid dehydratase YP_006293585.1 1757960 R 754477 CDS YP_006293586.1 387130696 12844441 1759929..1761215 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase; N-acetylglutamate synthase 1761215 12844441 Q7C_1758 Methylophaga frappieri N-acetylglutamate synthase YP_006293586.1 1759929 D 754477 CDS YP_006293587.1 387130697 12844442 complement(1761208..1761738) 1 NC_017856.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 1761738 12844442 Q7C_1759 Methylophaga frappieri Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase YP_006293587.1 1761208 R 754477 CDS YP_006293588.1 387130698 12844443 1761783..1762508 1 NC_017856.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase 1762508 12844443 Q7C_1760 Methylophaga frappieri phosphoserine phosphatase YP_006293588.1 1761783 D 754477 CDS YP_006293589.1 387130699 12844444 1762558..1764000 1 NC_017856.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B 1764000 12844444 Q7C_1761 Methylophaga frappieri Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B YP_006293589.1 1762558 D 754477 CDS YP_006293590.1 387130700 12844445 1764185..1765327 1 NC_017856.1 PFAM: FIST C domain; FIST N domain; hypothetical protein 1765327 12844445 Q7C_1762 Methylophaga frappieri hypothetical protein YP_006293590.1 1764185 D 754477 CDS YP_006293591.1 387130701 12844446 complement(1765329..1766603) 1 NC_017856.1 PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family; glutamate--cysteine ligase , divergent, of Alpha- and Beta-proteobacteria type 1766603 12844446 Q7C_1763 Methylophaga frappieri glutamate--cysteine ligase , divergent, of Alpha- and Beta-proteobacteria type YP_006293591.1 1765329 R 754477 CDS YP_006293592.1 387130702 12844447 1766828..1767238 1 NC_017856.1 PFAM: Response regulator receiver domain; twitching motility protein PilG 1767238 12844447 Q7C_1764 Methylophaga frappieri twitching motility protein PilG YP_006293592.1 1766828 D 754477 CDS YP_006293593.1 387130703 12844448 1767242..1767607 1 NC_017856.1 PFAM: Response regulator receiver domain; twitching motility protein PilH 1767607 12844448 Q7C_1765 Methylophaga frappieri twitching motility protein PilH YP_006293593.1 1767242 D 754477 CDS YP_006293594.1 387130704 12844449 1767610..1768161 1 NC_017856.1 PFAM: CheW-like domain; type IV pili signal transduction protein PilI 1768161 12844449 Q7C_1766 Methylophaga frappieri type IV pili signal transduction protein PilI YP_006293594.1 1767610 D 754477 CDS YP_006293595.1 387130705 12844450 1768183..1769445 1 NC_017856.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; type IV pilus biogenesis protein PilJ 1769445 12844450 Q7C_1767 Methylophaga frappieri type IV pilus biogenesis protein PilJ YP_006293595.1 1768183 D 754477 CDS YP_006293596.1 387130706 12844451 1769476..1775175 1 NC_017856.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 1775175 12844451 Q7C_1768 Methylophaga frappieri signal transduction histidine kinase YP_006293596.1 1769476 D 754477 CDS YP_006293597.1 387130707 12844452 1775175..1775642 1 NC_017856.1 PFAM: CheW-like domain; CheW-like protein 1775642 12844452 Q7C_1769 Methylophaga frappieri CheW-like protein YP_006293597.1 1775175 D 754477 CDS YP_006293598.1 387130708 12844453 1775662..1777617 1 NC_017856.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 1777617 12844453 Q7C_1770 Methylophaga frappieri lytic murein transglycosylase YP_006293598.1 1775662 D 754477 CDS YP_006293599.1 387130709 12844454 1777624..1778850 1 NC_017856.1 PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase 1778850 12844454 Q7C_1771 Methylophaga frappieri tRNA nucleotidyltransferase YP_006293599.1 1777624 D 754477 CDS YP_006293600.1 387130710 12844455 1778917..1779897 1 NC_017856.1 PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 1779897 12844455 Q7C_1772 Methylophaga frappieri N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase YP_006293600.1 1778917 D 754477 CDS YP_006293601.1 387130711 12844456 1779904..1780830 1 NC_017856.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; ribosomal protein S6 modification protein, putative 1780830 12844456 Q7C_1773 Methylophaga frappieri ribosomal protein S6 modification protein, putative YP_006293601.1 1779904 D 754477 CDS YP_006293602.1 387130712 12844457 1780820..1781698 1 NC_017856.1 PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; Triphosphoribosyl-dephospho-CoA synthetase 1781698 12844457 Q7C_1774 Methylophaga frappieri Triphosphoribosyl-dephospho-CoA synthetase YP_006293602.1 1780820 D 754477 CDS YP_006293603.1 387130713 12844458 1781810..1782328 1 NC_017856.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme 1782328 12844458 Q7C_1775 Methylophaga frappieri Formaldehyde activating enzyme YP_006293603.1 1781810 D 754477 CDS YP_006293604.1 387130714 12844459 complement(1782376..1783071) 1 NC_017856.1 PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; HisA/HisF family protein 1783071 12844459 Q7C_1776 Methylophaga frappieri HisA/HisF family protein YP_006293604.1 1782376 R 754477 CDS YP_006293605.1 387130715 12844460 1783093..1784034 1 NC_017856.1 PFAM: ATP-grasp domain; ATP-utilizing enzyme (ATP-grasp superfamily) 1784034 12844460 Q7C_1777 Methylophaga frappieri ATP-utilizing enzyme (ATP-grasp superfamily) YP_006293605.1 1783093 D 754477 CDS YP_006293606.1 387130716 12844461 1784031..1785053 1 NC_017856.1 TIGRFAM: probable H4MPT-linked C1 transfer pathway protein; S-layer protein 1785053 12844461 Q7C_1778 Methylophaga frappieri S-layer protein YP_006293606.1 1784031 D 754477 CDS YP_006293607.1 387130717 12844462 1785063..1786445 1 NC_017856.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; Para-aminobenzoate synthase, aminase component 1786445 12844462 Q7C_1779 Methylophaga frappieri Para-aminobenzoate synthase, aminase component YP_006293607.1 1785063 D 754477 CDS YP_006293608.1 387130718 12844463 1786442..1787023 1 NC_017856.1 PFAM: Amino acid kinase family; delta 1-pyrroline-5-carboxylate synthetase 1787023 12844463 Q7C_1780 Methylophaga frappieri delta 1-pyrroline-5-carboxylate synthetase YP_006293608.1 1786442 D 754477 CDS YP_006293609.1 387130719 12844464 1787020..1788135 1 NC_017856.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain; PLP-dependent decarboxylase 1788135 12844464 Q7C_1781 Methylophaga frappieri PLP-dependent decarboxylase YP_006293609.1 1787020 D 754477 CDS YP_006293610.1 387130720 12844465 complement(1788110..1789534) 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); sporulation domain-containing protein 1789534 12844465 Q7C_1782 Methylophaga frappieri sporulation domain-containing protein YP_006293610.1 1788110 R 754477 CDS YP_006293611.1 387130721 12844466 complement(1789646..1790728) 1 NC_017856.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 1790728 12844466 Q7C_1783 Methylophaga frappieri 3-dehydroquinate synthase YP_006293611.1 1789646 R 754477 CDS YP_006293612.1 387130722 12844467 complement(1790725..1791258) 1 NC_017856.1 PFAM: Shikimate kinase; shikimate kinase 1791258 12844467 Q7C_1784 Methylophaga frappieri shikimate kinase YP_006293612.1 1790725 R 754477 CDS YP_006293613.1 387130723 12844468 complement(1791355..1793472) 1 NC_017856.1 PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus biogenesis protein PilQ 1793472 12844468 Q7C_1785 Methylophaga frappieri type IV pilus biogenesis protein PilQ YP_006293613.1 1791355 R 754477 CDS YP_006293614.1 387130724 12844469 complement(1793509..1794066) 1 NC_017856.1 PFAM: Pilus assembly protein, PilP; type IV pilus biogenesis protein PilP 1794066 12844469 Q7C_1786 Methylophaga frappieri type IV pilus biogenesis protein PilP YP_006293614.1 1793509 R 754477 CDS YP_006293615.1 387130725 12844470 complement(1794063..1794650) 1 NC_017856.1 PFAM: Pilus assembly protein, PilO; type IV pilus biogenesis protein PilO 1794650 12844470 Q7C_1787 Methylophaga frappieri type IV pilus biogenesis protein PilO YP_006293615.1 1794063 R 754477 CDS YP_006293616.1 387130726 12844471 complement(1794650..1795213) 1 NC_017856.1 PFAM: Fimbrial assembly protein (PilN); type IV pilus biogenesis protein PilN 1795213 12844471 Q7C_1788 Methylophaga frappieri type IV pilus biogenesis protein PilN YP_006293616.1 1794650 R 754477 CDS YP_006293617.1 387130727 12844472 complement(1795213..1796250) 1 NC_017856.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus biogenesis protein PilM 1796250 12844472 Q7C_1789 Methylophaga frappieri type IV pilus biogenesis protein PilM YP_006293617.1 1795213 R 754477 CDS YP_006293618.1 387130728 12844473 1796464..1798893 1 NC_017856.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; Multimodular transpeptidase-transglycosylase 1798893 12844473 Q7C_1790 Methylophaga frappieri Multimodular transpeptidase-transglycosylase YP_006293618.1 1796464 D 754477 CDS YP_006293619.1 387130729 12844474 complement(1798896..1800398) 1 NC_017856.1 PFAM: Peptidase family M48; Zn-dependent protease 1800398 12844474 Q7C_1791 Methylophaga frappieri Zn-dependent protease YP_006293619.1 1798896 R 754477 CDS YP_006293620.1 387130730 12844475 complement(1800419..1800658) 1 NC_017856.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 1800658 12844475 Q7C_1792 Methylophaga frappieri 50S ribosomal protein L31 YP_006293620.1 1800419 R 754477 CDS YP_006293621.1 387130731 12844476 complement(1800729..1801322) 1 NC_017856.1 PFAM: Tellurite resistance protein TehB; type 12 methyltransferase 1801322 12844476 Q7C_1793 Methylophaga frappieri type 12 methyltransferase YP_006293621.1 1800729 R 754477 CDS YP_006293622.1 387130732 12844477 complement(1801327..1802778) 1 NC_017856.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Potassium uptake protein TrkH 1802778 12844477 Q7C_1794 Methylophaga frappieri Potassium uptake protein TrkH YP_006293622.1 1801327 R 754477 CDS YP_006293623.1 387130733 12844478 complement(1802786..1804297) 1 NC_017856.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE 1804297 12844478 Q7C_1795 Methylophaga frappieri Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE YP_006293623.1 1802786 R 754477 CDS YP_006293624.1 387130734 12844479 complement(1804297..1805166) 1 NC_017856.1 PFAM: CBS domain; Transporter associated domain; Magnesium and cobalt efflux protein CorC 1805166 12844479 Q7C_1796 Methylophaga frappieri Magnesium and cobalt efflux protein CorC YP_006293624.1 1804297 R 754477 CDS YP_006293625.1 387130735 12844480 complement(1805169..1805630) 1 NC_017856.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metal-dependent hydrolase 1805630 12844480 Q7C_1797 Methylophaga frappieri metal-dependent hydrolase YP_006293625.1 1805169 R 754477 CDS YP_006293626.1 387130736 12844481 complement(1805627..1806601) 1 NC_017856.1 PFAM: PhoH-like protein; Phosphate starvation-inducible ATPase PhoH with RNA binding motif 1806601 12844481 Q7C_1798 Methylophaga frappieri Phosphate starvation-inducible ATPase PhoH with RNA binding motif YP_006293626.1 1805627 R 754477 CDS YP_006293627.1 387130737 12844482 complement(1806622..1807962) 1 NC_017856.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 methylthiotransferase 1807962 12844482 Q7C_1799 Methylophaga frappieri tRNA-i(6)A37 methylthiotransferase YP_006293627.1 1806622 R 754477 CDS YP_006293628.1 387130738 12844483 complement(1808246..1808566) 1 NC_017856.1 hypothetical protein 1808566 12844483 Q7C_1800 Methylophaga frappieri hypothetical protein YP_006293628.1 1808246 R 754477 CDS YP_006293629.1 387130739 12844484 complement(1808576..1808875) 1 NC_017856.1 PFAM: Domain of unknown function (DUF1840); hypothetical protein 1808875 12844484 Q7C_1801 Methylophaga frappieri hypothetical protein YP_006293629.1 1808576 R 754477 CDS YP_006293630.1 387130740 12844485 1809001..1809675 1 NC_017856.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1809675 12844485 Q7C_1802 Methylophaga frappieri DNA repair protein RadC YP_006293630.1 1809001 D 754477 CDS YP_006293631.1 387130741 12844486 complement(1809672..1811231) 1 NC_017856.1 iron-regulated membrane protein 1811231 12844486 Q7C_1803 Methylophaga frappieri iron-regulated membrane protein YP_006293631.1 1809672 R 754477 CDS YP_006293632.1 387130742 12844487 complement(1811228..1811488) 1 NC_017856.1 hypothetical protein 1811488 12844487 Q7C_1804 Methylophaga frappieri hypothetical protein YP_006293632.1 1811228 R 754477 CDS YP_006293633.1 387130743 12844488 complement(1811478..1811804) 1 NC_017856.1 hypothetical protein 1811804 12844488 Q7C_1805 Methylophaga frappieri hypothetical protein YP_006293633.1 1811478 R 754477 CDS YP_006293634.1 387130744 12844489 complement(1811901..1812734) 1 NC_017856.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase 1812734 12844489 Q7C_1806 Methylophaga frappieri thymidylate synthase YP_006293634.1 1811901 R 754477 CDS YP_006293635.1 387130745 12844490 complement(1812803..1813735) 1 NC_017856.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Response regulator of zinc sigma-54-dependent two-component system 1813735 12844490 Q7C_1807 Methylophaga frappieri Response regulator of zinc sigma-54-dependent two-component system YP_006293635.1 1812803 R 754477 CDS YP_006293636.1 387130746 12844491 complement(1813732..1814469) 1 NC_017856.1 hypothetical protein 1814469 12844491 Q7C_1808 Methylophaga frappieri hypothetical protein YP_006293636.1 1813732 R 754477 CDS YP_006293637.1 387130747 12844492 1814625..1816853 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1816853 12844492 Q7C_1809 Methylophaga frappieri TonB-dependent receptor YP_006293637.1 1814625 D 754477 CDS YP_006293638.1 387130748 12844493 complement(1816906..1818414) 1 NC_017856.1 PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; Exopolyphosphatase 1818414 12844493 Q7C_1810 Methylophaga frappieri Exopolyphosphatase YP_006293638.1 1816906 R 754477 CDS YP_006293639.1 387130749 12844494 complement(1818542..1819255) 1 NC_017856.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; Phosphate transport system regulatory protein PhoU 1819255 12844494 Q7C_1811 Methylophaga frappieri Phosphate transport system regulatory protein PhoU YP_006293639.1 1818542 R 754477 CDS YP_006293640.1 387130750 12844495 complement(1819277..1820119) 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; TC 3.A.1.7.1; phosphate transport ATP-binding protein PstB 1820119 12844495 Q7C_1812 Methylophaga frappieri phosphate transport ATP-binding protein PstB YP_006293640.1 1819277 R 754477 CDS YP_006293641.1 387130751 12844496 complement(1820119..1821789) 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; TC 3.A.1.7.1; phosphate ABC transporter permease 1821789 12844496 Q7C_1813 Methylophaga frappieri phosphate ABC transporter permease YP_006293641.1 1820119 R 754477 CDS YP_006293642.1 387130752 12844497 complement(1821801..1824062) 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.7.1; phosphate ABC transporter permease 1824062 12844497 Q7C_1814 Methylophaga frappieri phosphate ABC transporter permease YP_006293642.1 1821801 R 754477 CDS YP_006293643.1 387130753 12844498 complement(1824229..1825185) 1 NC_017856.1 TIGRFAM: phosphate binding protein; phosphate ABC transporter substrate-binding protein 1825185 12844498 Q7C_1815 Methylophaga frappieri phosphate ABC transporter substrate-binding protein YP_006293643.1 1824229 R 754477 CDS YP_006293644.1 387130754 12844499 complement(1825331..1826620) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR; phosphate regulon sensor protein PhoR 1826620 12844499 Q7C_1816 Methylophaga frappieri phosphate regulon sensor protein PhoR YP_006293644.1 1825331 R 754477 CDS YP_006293645.1 387130755 12844500 complement(1826636..1827325) 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein PhoB 1827325 12844500 Q7C_1817 Methylophaga frappieri phosphate regulon transcriptional regulatory protein PhoB YP_006293645.1 1826636 R 754477 CDS YP_006293646.1 387130756 12844501 complement(1827503..1829152) 1 NC_017856.1 PFAM: Phosphate transporter family; low-affinity inorganic phosphate transporter 1829152 12844501 Q7C_1818 Methylophaga frappieri low-affinity inorganic phosphate transporter YP_006293646.1 1827503 R 754477 CDS YP_006293647.1 387130757 12844502 1829288..1831111 1 NC_017856.1 PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase 1831111 12844502 Q7C_1819 Methylophaga frappieri Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase YP_006293647.1 1829288 D 754477 CDS YP_006293648.1 387130758 12844503 1831257..1831697 1 NC_017856.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 1831697 12844503 Q7C_1820 Methylophaga frappieri 3-dehydroquinate dehydratase YP_006293648.1 1831257 D 754477 CDS YP_006293649.1 387130759 12844504 1831701..1832162 1 NC_017856.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein 1832162 12844504 Q7C_1821 Methylophaga frappieri acetyl-CoA carboxylase biotin carboxyl carrier protein YP_006293649.1 1831701 D 754477 CDS YP_006293650.1 387130760 12844505 1832216..1833556 1 NC_017856.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 1833556 12844505 Q7C_1822 Methylophaga frappieri biotin carboxylase YP_006293650.1 1832216 D 754477 CDS YP_006293651.1 387130761 12844506 1833569..1834444 1 NC_017856.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1834444 12844506 Q7C_1823 Methylophaga frappieri 50S ribosomal protein L11 methyltransferase YP_006293651.1 1833569 D 754477 CDS YP_006293652.1 387130762 12844507 1834437..1835444 1 NC_017856.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA dihydrouridine synthase B 1835444 12844507 Q7C_1824 Methylophaga frappieri tRNA dihydrouridine synthase B YP_006293652.1 1834437 D 754477 CDS YP_006293653.1 387130763 12844508 1835441..1835731 1 NC_017856.1 PFAM: Bacterial regulatory protein, Fis family; DNA-binding protein Fis 1835731 12844508 Q7C_1825 Methylophaga frappieri DNA-binding protein Fis YP_006293653.1 1835441 D 754477 CDS YP_006293654.1 387130764 12844509 1835763..1837322 1 NC_017856.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase 1837322 12844509 Q7C_1826 Methylophaga frappieri IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase YP_006293654.1 1835763 D 754477 CDS YP_006293655.1 387130765 12844510 1837453..1838481 1 NC_017856.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 1838481 12844510 Q7C_1827 Methylophaga frappieri N-acetyl-gamma-glutamyl-phosphate reductase YP_006293655.1 1837453 D 754477 CDS YP_006293656.1 387130766 12844511 1838481..1839164 1 NC_017856.1 hypothetical protein 1839164 12844511 Q7C_1828 Methylophaga frappieri hypothetical protein YP_006293656.1 1838481 D 754477 CDS YP_006293657.1 387130767 12844512 1839176..1839640 1 NC_017856.1 PFAM: Protein of unknown function, DUF583; Integral membrane protein CcmA 1839640 12844512 Q7C_1829 Methylophaga frappieri Integral membrane protein CcmA YP_006293657.1 1839176 D 754477 CDS YP_006293658.1 387130768 12844513 1839705..1840049 1 NC_017856.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron binding protein from the HesB_IscA_SufA family 1840049 12844513 Q7C_1830 Methylophaga frappieri iron binding protein from the HesB_IscA_SufA family YP_006293658.1 1839705 D 754477 CDS YP_006293659.1 387130769 12844514 1840173..1841423 1 NC_017856.1 PFAM: Predicted membrane protein (DUF2254); hypothetical protein 1841423 12844514 Q7C_1831 Methylophaga frappieri hypothetical protein YP_006293659.1 1840173 D 754477 CDS YP_006293660.1 387130770 12844515 1841608..1842558 1 NC_017856.1 Transcriptional Regulator, AraC family 1842558 12844515 Q7C_1832 Methylophaga frappieri Transcriptional Regulator, AraC family YP_006293660.1 1841608 D 754477 CDS YP_006293661.1 387130771 12844516 1842592..1844733 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1844733 12844516 Q7C_1833 Methylophaga frappieri TonB-dependent receptor YP_006293661.1 1842592 D 754477 CDS YP_006293662.1 387130772 12844517 1844735..1845919 1 NC_017856.1 PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1845919 12844517 Q7C_1834 Methylophaga frappieri major facilitator superfamily protein YP_006293662.1 1844735 D 754477 CDS YP_006293663.1 387130773 12844518 1845937..1847181 1 NC_017856.1 PFAM: Beta-lactamase; beta-lactamase 1847181 12844518 Q7C_1835 Methylophaga frappieri beta-lactamase YP_006293663.1 1845937 D 754477 CDS YP_006293664.1 387130774 12844519 1847326..1847934 1 NC_017856.1 PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1847934 12844519 Q7C_1836 Methylophaga frappieri TetR family transcriptional regulator YP_006293664.1 1847326 D 754477 CDS YP_006293665.1 387130775 12844520 1847931..1849091 1 NC_017856.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; multidrug/solvent RND membrane fusion protein 1849091 12844520 Q7C_1837 Methylophaga frappieri multidrug/solvent RND membrane fusion protein YP_006293665.1 1847931 D 754477 CDS YP_006293666.1 387130776 12844521 1849094..1852240 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 1852240 12844521 Q7C_1838 Methylophaga frappieri RND efflux system, inner membrane transporter CmeB YP_006293666.1 1849094 D 754477 CDS YP_006293667.1 387130777 12844522 1852237..1853646 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC 1853646 12844522 Q7C_1839 Methylophaga frappieri RND efflux system, outer membrane lipoprotein CmeC YP_006293667.1 1852237 D 754477 CDS YP_006293668.1 387130778 12844523 1853716..1853898 1 NC_017856.1 hypothetical protein 1853898 12844523 Q7C_1840 Methylophaga frappieri hypothetical protein YP_006293668.1 1853716 D 754477 CDS YP_006293669.1 387130779 12844524 complement(1853911..1854027) 1 NC_017856.1 hypothetical protein 1854027 12844524 Q7C_1841 Methylophaga frappieri hypothetical protein YP_006293669.1 1853911 R 754477 CDS YP_006293670.1 387130780 12844525 1854077..1856158 1 NC_017856.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT 1856158 12844525 Q7C_1842 Methylophaga frappieri High-affinity choline uptake protein BetT YP_006293670.1 1854077 D 754477 CDS YP_006293671.1 387130781 12844526 complement(1856152..1857222) 1 NC_017856.1 porin 1857222 12844526 Q7C_1843 Methylophaga frappieri porin YP_006293671.1 1856152 R 754477 CDS YP_006293672.1 387130782 12844527 complement(1858217..1858591) 1 NC_017856.1 hypothetical protein 1858591 12844527 Q7C_1844 Methylophaga frappieri hypothetical protein YP_006293672.1 1858217 R 754477 CDS YP_006293673.1 387130783 12844528 complement(1858731..1858979) 1 NC_017856.1 hypothetical protein 1858979 12844528 Q7C_1845 Methylophaga frappieri hypothetical protein YP_006293673.1 1858731 R 754477 CDS YP_006293674.1 387130784 12844529 complement(1858999..1860162) 1 NC_017856.1 PFAM: Na+/Pi-cotransporter; Sodium-dependent phosphate transporter 1860162 12844529 Q7C_1846 Methylophaga frappieri Sodium-dependent phosphate transporter YP_006293674.1 1858999 R 754477 CDS YP_006293675.1 387130785 12844530 complement(1860606..1861964) 1 NC_017856.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; GTPase and tRNA-U34 5-formylation enzyme TrmE 1861964 12844530 Q7C_1847 Methylophaga frappieri GTPase and tRNA-U34 5-formylation enzyme TrmE YP_006293675.1 1860606 R 754477 CDS YP_006293676.1 387130786 12844531 complement(1861977..1863623) 1 NC_017856.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; Inner membrane protein translocase component YidC, long form 1863623 12844531 Q7C_1848 Methylophaga frappieri Inner membrane protein translocase component YidC, long form YP_006293676.1 1861977 R 754477 CDS YP_006293677.1 387130787 12844532 complement(1863616..1863753) 1 NC_017856.1 PFAM: Domain of unknown function DUF37; protein YidD 1863753 12844532 Q7C_1849 Methylophaga frappieri protein YidD YP_006293677.1 1863616 R 754477 CDS YP_006293678.1 387130788 12844533 complement(1863837..1864196) 1 NC_017856.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; Ribonuclease P protein component 1864196 12844533 Q7C_1850 Methylophaga frappieri Ribonuclease P protein component YP_006293678.1 1863837 R 754477 CDS YP_006293679.1 387130789 12844534 complement(1864222..1864356) 1 NC_017856.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 1864356 12844534 Q7C_1851 Methylophaga frappieri 50S ribosomal protein L34 YP_006293679.1 1864222 R 754477 CDS YP_006293680.1 387130790 12844535 complement(1864406..1864576) 1 NC_017856.1 hypothetical protein 1864576 12844535 Q7C_1852 Methylophaga frappieri hypothetical protein YP_006293680.1 1864406 R 754477 CDS YP_006293681.1 387130791 12844536 1864627..1865976 1 NC_017856.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; Chromosomal replication initiator protein DnaA 1865976 12844536 Q7C_1853 Methylophaga frappieri Chromosomal replication initiator protein DnaA YP_006293681.1 1864627 D 754477 CDS YP_006293682.1 387130792 12844537 1865992..1867095 1 NC_017856.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 1867095 12844537 Q7C_1854 Methylophaga frappieri DNA polymerase III subunit beta YP_006293682.1 1865992 D 754477 CDS YP_006293683.1 387130793 12844538 complement(1867150..1867776) 1 NC_017856.1 PFAM: YceI-like domain; YceI-like protein 1867776 12844538 Q7C_1855 Methylophaga frappieri YceI-like protein YP_006293683.1 1867150 R 754477 CDS YP_006293684.1 387130794 12844539 complement(1867933..1869675) 1 NC_017856.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; glutathione-regulated potassium-efflux system protein KefB 1869675 12844539 Q7C_1856 Methylophaga frappieri glutathione-regulated potassium-efflux system protein KefB YP_006293684.1 1867933 R 754477 CDS YP_006293685.1 387130795 12844540 complement(1869699..1870886) 1 NC_017856.1 PFAM: HemY protein N-terminus; TIGRFAM: hemY protein; HemY-like protein 1870886 12844540 Q7C_1857 Methylophaga frappieri HemY-like protein YP_006293685.1 1869699 R 754477 CDS YP_006293686.1 387130796 12844541 complement(1870883..1871914) 1 NC_017856.1 PFAM: HemX; uroporphyrinogen III 1871914 12844541 Q7C_1858 Methylophaga frappieri uroporphyrinogen III YP_006293686.1 1870883 R 754477 CDS YP_006293687.1 387130797 12844542 complement(1871889..1872656) 1 NC_017856.1 PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-III synthase 1872656 12844542 Q7C_1859 Methylophaga frappieri uroporphyrinogen-III synthase YP_006293687.1 1871889 R 754477 CDS YP_006293688.1 387130798 12844543 complement(1872646..1873575) 1 NC_017856.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase 1873575 12844543 Q7C_1860 Methylophaga frappieri porphobilinogen deaminase YP_006293688.1 1872646 R 754477 CDS YP_006293689.1 387130799 12844544 1873658..1875094 1 NC_017856.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 1875094 12844544 Q7C_1861 Methylophaga frappieri argininosuccinate lyase YP_006293689.1 1873658 D 754477 CDS YP_006293690.1 387130800 12844545 complement(1875213..1877447) 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 1877447 12844545 Q7C_1862 Methylophaga frappieri ferrichrome-iron receptor YP_006293690.1 1875213 R 754477 CDS YP_006293691.1 387130801 12844546 complement(1877707..1878363) 1 NC_017856.1 PFAM: 2OG-Fe(II) oxygenase superfamily; Iron-uptake factor PiuC 1878363 12844546 Q7C_1863 Methylophaga frappieri Iron-uptake factor PiuC YP_006293691.1 1877707 R 754477 CDS YP_006293692.1 387130802 12844547 1878429..1879241 1 NC_017856.1 hypothetical protein 1879241 12844547 Q7C_1864 Methylophaga frappieri hypothetical protein YP_006293692.1 1878429 D 754477 CDS YP_006293693.1 387130803 12844548 complement(1879298..1879423) 1 NC_017856.1 hypothetical protein 1879423 12844548 Q7C_1865 Methylophaga frappieri hypothetical protein YP_006293693.1 1879298 R 754477 CDS YP_006293694.1 387130804 12844549 1879600..1886787 1 NC_017856.1 PFAM: The GLUG motif; haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; Large exoproteins involved in heme utilization or adhesion 1886787 12844549 Q7C_1866 Methylophaga frappieri Large exoproteins involved in heme utilization or adhesion YP_006293694.1 1879600 D 754477 CDS YP_006293695.1 387130805 12844550 1886815..1888443 1 NC_017856.1 PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; activation/secretion signal peptide protein 1888443 12844550 Q7C_1867 Methylophaga frappieri activation/secretion signal peptide protein YP_006293695.1 1886815 D 754477 CDS YP_006293696.1 387130806 12844551 1888546..1888950 1 NC_017856.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Zn(II)-responsive transcriptional regulator; HTH-type transcriptional regulator zntR 1888950 12844551 Q7C_1868 Methylophaga frappieri HTH-type transcriptional regulator zntR YP_006293696.1 1888546 D 754477 CDS YP_006293697.1 387130807 12844552 1888943..1890013 1 NC_017856.1 PFAM: Predicted permease; transporter 1890013 12844552 Q7C_1869 Methylophaga frappieri transporter YP_006293697.1 1888943 D 754477 CDS YP_006293698.1 387130808 12844553 complement(1890253..1892427) 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; OMR family iron-siderophore receptor precursor 1892427 12844553 Q7C_1870 Methylophaga frappieri OMR family iron-siderophore receptor precursor YP_006293698.1 1890253 R 754477 CDS YP_006293699.1 387130809 12844554 complement(1892531..1892977) 1 NC_017856.1 PFAM: Tellurite resistance protein TerB; hypothetical protein 1892977 12844554 Q7C_1871 Methylophaga frappieri hypothetical protein YP_006293699.1 1892531 R 754477 CDS YP_006293700.1 387130810 12844555 complement(1893055..1894005) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator 1894005 12844555 Q7C_1872 Methylophaga frappieri two-component response regulator YP_006293700.1 1893055 R 754477 CDS YP_006293701.1 387130811 12844556 complement(1893998..1897405) 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Two-component hybrid sensor and regulator 1897405 12844556 Q7C_1873 Methylophaga frappieri Two-component hybrid sensor and regulator YP_006293701.1 1893998 R 754477 CDS YP_006293702.1 387130812 12844557 complement(1897594..1898256) 1 NC_017856.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG; urease accessory protein UreG 1898256 12844557 Q7C_1874 Methylophaga frappieri urease accessory protein UreG YP_006293702.1 1897594 R 754477 CDS YP_006293703.1 387130813 12844558 complement(1898222..1898857) 1 NC_017856.1 PFAM: UreF; urease accessory protein UreF 1898857 12844558 Q7C_1875 Methylophaga frappieri urease accessory protein UreF YP_006293703.1 1898222 R 754477 CDS YP_006293704.1 387130814 12844559 complement(1898899..1899390) 1 NC_017856.1 PFAM: UreE urease accessory protein, N-terminal domain; UreE urease accessory protein, C-terminal domain; Urease accessory protein UreE 1899390 12844559 Q7C_1876 Methylophaga frappieri Urease accessory protein UreE YP_006293704.1 1898899 R 754477 CDS YP_006293705.1 387130815 12844560 complement(1899402..1901120) 1 NC_017856.1 PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; urease subunit alpha 1901120 12844560 Q7C_1877 Methylophaga frappieri urease subunit alpha YP_006293705.1 1899402 R 754477 CDS YP_006293706.1 387130816 12844561 complement(1901117..1901425) 1 NC_017856.1 PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit; urease subunit beta 1901425 12844561 Q7C_1878 Methylophaga frappieri urease subunit beta YP_006293706.1 1901117 R 754477 CDS YP_006293707.1 387130817 12844562 complement(1901435..1901737) 1 NC_017856.1 PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit; urease subunit gamma 1901737 12844562 Q7C_1879 Methylophaga frappieri urease subunit gamma YP_006293707.1 1901435 R 754477 CDS YP_006293708.1 387130818 12844563 complement(1901757..1902638) 1 NC_017856.1 PFAM: UreD urease accessory protein; urease accessory protein UreD 1902638 12844563 Q7C_1880 Methylophaga frappieri urease accessory protein UreD YP_006293708.1 1901757 R 754477 CDS YP_006293709.1 387130819 12844564 complement(1902706..1903395) 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; Urea ABC transporter, ATPase protein UrtE 1903395 12844564 Q7C_1881 Methylophaga frappieri Urea ABC transporter, ATPase protein UrtE YP_006293709.1 1902706 R 754477 CDS YP_006293710.1 387130820 12844565 complement(1903417..1904163) 1 NC_017856.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; Urea ABC transporter, ATPase protein UrtD 1904163 12844565 Q7C_1882 Methylophaga frappieri Urea ABC transporter, ATPase protein UrtD YP_006293710.1 1903417 R 754477 CDS YP_006293711.1 387130821 12844566 complement(1904163..1905332) 1 NC_017856.1 PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; Urea ABC transporter, permease protein UrtC 1905332 12844566 Q7C_1883 Methylophaga frappieri Urea ABC transporter, permease protein UrtC YP_006293711.1 1904163 R 754477 CDS YP_006293712.1 387130822 12844567 complement(1905350..1906273) 1 NC_017856.1 PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; Urea ABC transporter, permease protein UrtB 1906273 12844567 Q7C_1884 Methylophaga frappieri Urea ABC transporter, permease protein UrtB YP_006293712.1 1905350 R 754477 CDS YP_006293713.1 387130823 12844568 complement(1906392..1907642) 1 NC_017856.1 TIGRFAM: urea ABC transporter, urea binding protein; Urea ABC transporter, substrate binding protein UrtA 1907642 12844568 Q7C_1885 Methylophaga frappieri Urea ABC transporter, substrate binding protein UrtA YP_006293713.1 1906392 R 754477 CDS YP_006293714.1 387130824 12844569 complement(1907708..1908043) 1 NC_017856.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; regulatory protein fmdB 1908043 12844569 Q7C_1886 Methylophaga frappieri regulatory protein fmdB YP_006293714.1 1907708 R 754477 CDS YP_006293715.1 387130825 12844570 complement(1908063..1909286) 1 NC_017856.1 PFAM: Acetamidase/Formamidase family; Formamidase 1909286 12844570 Q7C_1887 Methylophaga frappieri Formamidase YP_006293715.1 1908063 R 754477 CDS YP_006293716.1 387130826 12844571 complement(1909330..1910466) 1 NC_017856.1 hypothetical protein 1910466 12844571 Q7C_1888 Methylophaga frappieri hypothetical protein YP_006293716.1 1909330 R 754477 CDS YP_006293717.1 387130827 12844572 1910660..1911157 1 NC_017856.1 hypothetical protein 1911157 12844572 Q7C_1889 Methylophaga frappieri hypothetical protein YP_006293717.1 1910660 D 754477 CDS YP_006293718.1 387130828 12844573 complement(1911159..1912283) 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; Domain of unknown function (DUF3335); GNAT family acetyltransferase 1912283 12844573 Q7C_1890 Methylophaga frappieri GNAT family acetyltransferase YP_006293718.1 1911159 R 754477 CDS YP_006293719.1 387130829 12844574 complement(1912285..1913247) 1 NC_017856.1 PFAM: Protein of unknown function (DUF2817); deacylase 1913247 12844574 Q7C_1891 Methylophaga frappieri deacylase YP_006293719.1 1912285 R 754477 CDS YP_006293720.1 387130830 12844575 complement(1913315..1913509) 1 NC_017856.1 hypothetical protein 1913509 12844575 Q7C_1892 Methylophaga frappieri hypothetical protein YP_006293720.1 1913315 R 754477 CDS YP_006293721.1 387130831 12844576 1913498..1914982 1 NC_017856.1 PFAM: RimK-like ATP-grasp domain; glutathione synthase/ribosomal protein S6 modification protein 1914982 12844576 Q7C_1893 Methylophaga frappieri glutathione synthase/ribosomal protein S6 modification protein YP_006293721.1 1913498 D 754477 CDS YP_006293722.1 387130832 12844577 complement(1915098..1916174) 1 NC_017856.1 PFAM: FecCD transport family; Vitamin B12 ABC transporter, permease component BtuC 1916174 12844577 Q7C_1894 Methylophaga frappieri Vitamin B12 ABC transporter, permease component BtuC YP_006293722.1 1915098 R 754477 CDS YP_006293723.1 387130833 12844578 complement(1916177..1917403) 1 NC_017856.1 PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF 1917403 12844578 Q7C_1895 Methylophaga frappieri Vitamin B12 ABC transporter, B12-binding component BtuF YP_006293723.1 1916177 R 754477 CDS YP_006293724.1 387130834 12844579 complement(1917403..1918410) 1 NC_017856.1 PFAM: ABC transporter; ABC transporter-like protein 1918410 12844579 Q7C_1896 Methylophaga frappieri ABC transporter-like protein YP_006293724.1 1917403 R 754477 CDS YP_006293725.1 387130835 12844580 complement(1918410..1920548) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 1920548 12844580 Q7C_1897 Methylophaga frappieri ferrichrome-iron receptor YP_006293725.1 1918410 R 754477 CDS YP_006293726.1 387130836 12844581 complement(1920678..1922738) 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1922738 12844581 Q7C_1898 Methylophaga frappieri TonB-dependent receptor YP_006293726.1 1920678 R 754477 CDS YP_006293727.1 387130837 12844582 1922884..1923786 1 NC_017856.1 PFAM: DnaJ C terminal region; DnaJ domain; DnaJ-class molecular chaperone CbpA 1923786 12844582 Q7C_1899 Methylophaga frappieri DnaJ-class molecular chaperone CbpA YP_006293727.1 1922884 D 754477 CDS YP_006293728.1 387130838 12844583 1923798..1925171 1 NC_017856.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; HtrA protease/chaperone protein / Serine protease (Protease DO) 1925171 12844583 Q7C_1900 Methylophaga frappieri HtrA protease/chaperone protein / Serine protease (Protease DO) YP_006293728.1 1923798 D 754477 CDS YP_006293729.1 387130839 12844584 1925281..1926624 1 NC_017856.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; NADP-specific glutamate dehydrogenase 1926624 12844584 Q7C_1901 Methylophaga frappieri NADP-specific glutamate dehydrogenase YP_006293729.1 1925281 D 754477 CDS YP_006293730.1 387130840 12844585 1926692..1927171 1 NC_017856.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 1927171 12844585 Q7C_1902 Methylophaga frappieri Bacterioferritin YP_006293730.1 1926692 D 754477 CDS YP_006293731.1 387130841 12844586 complement(1927259..1927615) 1 NC_017856.1 hypothetical protein 1927615 12844586 Q7C_1903 Methylophaga frappieri hypothetical protein YP_006293731.1 1927259 R 754477 CDS YP_006293732.1 387130842 12844587 complement(1927643..1927936) 1 NC_017856.1 Transcriptional regulatory protein, ArsR family 1927936 12844587 Q7C_1904 Methylophaga frappieri Transcriptional regulatory protein, ArsR family YP_006293732.1 1927643 R 754477 CDS YP_006293733.1 387130843 12844588 1928224..1928823 1 NC_017856.1 PFAM: Exopolysaccharide synthesis, ExoD; exopolysaccharide synthesis, ExoD 1928823 12844588 Q7C_1905 Methylophaga frappieri exopolysaccharide synthesis, ExoD YP_006293733.1 1928224 D 754477 CDS YP_006293734.1 387130844 12844589 complement(1929173..1929655) 1 NC_017856.1 PFAM: Cupin domain; cupin domain-containing protein 1929655 12844589 Q7C_1906 Methylophaga frappieri cupin domain-containing protein YP_006293734.1 1929173 R 754477 CDS YP_006293735.1 387130845 12844590 1930040..1930174 1 NC_017856.1 hypothetical protein 1930174 12844590 Q7C_1907 Methylophaga frappieri hypothetical protein YP_006293735.1 1930040 D 754477 CDS YP_006293736.1 387130846 12844591 complement(1930349..1931092) 1 NC_017856.1 hypothetical protein 1931092 12844591 Q7C_1908 Methylophaga frappieri hypothetical protein YP_006293736.1 1930349 R 754477 CDS YP_006293737.1 387130847 12844592 complement(1931058..1932422) 1 NC_017856.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase 1932422 12844592 Q7C_1909 Methylophaga frappieri N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase YP_006293737.1 1931058 R 754477 CDS YP_006293738.1 387130848 12844593 1932456..1932602 1 NC_017856.1 hypothetical protein 1932602 12844593 Q7C_1910 Methylophaga frappieri hypothetical protein YP_006293738.1 1932456 D 754477 CDS YP_006293739.1 387130849 12844594 complement(1932561..1932983) 1 NC_017856.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase subunit epsilon 1932983 12844594 Q7C_1911 Methylophaga frappieri ATP synthase subunit epsilon YP_006293739.1 1932561 R 754477 CDS YP_006293740.1 387130850 12844595 complement(1933000..1934376) 1 NC_017856.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase subunit beta 1934376 12844595 Q7C_1912 Methylophaga frappieri ATP synthase subunit beta YP_006293740.1 1933000 R 754477 CDS YP_006293741.1 387130851 12844596 complement(1934430..1935296) 1 NC_017856.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase subunit gamma 1935296 12844596 Q7C_1913 Methylophaga frappieri ATP synthase subunit gamma YP_006293741.1 1934430 R 754477 CDS YP_006293742.1 387130852 12844597 complement(1935311..1936852) 1 NC_017856.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase subunit alpha 1936852 12844597 Q7C_1914 Methylophaga frappieri ATP synthase subunit alpha YP_006293742.1 1935311 R 754477 CDS YP_006293743.1 387130853 12844598 complement(1936878..1937408) 1 NC_017856.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase subunit delta 1937408 12844598 Q7C_1915 Methylophaga frappieri ATP synthase subunit delta YP_006293743.1 1936878 R 754477 CDS YP_006293744.1 387130854 12844599 complement(1937423..1937893) 1 NC_017856.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase archaeal, H subunit; ATP synthase subunit B 1937893 12844599 Q7C_1916 Methylophaga frappieri ATP synthase subunit B YP_006293744.1 1937423 R 754477 CDS YP_006293745.1 387130855 12844600 complement(1937936..1938169) 1 NC_017856.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase subunit C 1938169 12844600 Q7C_1917 Methylophaga frappieri ATP synthase subunit C YP_006293745.1 1937936 R 754477 CDS YP_006293746.1 387130856 12844601 complement(1938227..1939129) 1 NC_017856.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase subunit A 1939129 12844601 Q7C_1918 Methylophaga frappieri ATP synthase subunit A YP_006293746.1 1938227 R 754477 CDS YP_006293747.1 387130857 12844602 complement(1939138..1939515) 1 NC_017856.1 PFAM: ATP synthase I chain; ATP synthase I subunit 1939515 12844602 Q7C_1919 Methylophaga frappieri ATP synthase I subunit YP_006293747.1 1939138 R 754477 CDS YP_006293748.1 387130858 12844603 complement(1939598..1940458) 1 NC_017856.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J 1940458 12844603 Q7C_1920 Methylophaga frappieri Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J YP_006293748.1 1939598 R 754477 CDS YP_006293749.1 387130859 12844604 complement(1940464..1941252) 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj 1941252 12844604 Q7C_1921 Methylophaga frappieri Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj YP_006293749.1 1940464 R 754477 CDS YP_006293750.1 387130860 12844605 complement(1941262..1941888) 1 NC_017856.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; rRNA small subunit methyltransferase, glucose inhibited division protein GidB 1941888 12844605 Q7C_1922 Methylophaga frappieri rRNA small subunit methyltransferase, glucose inhibited division protein GidB YP_006293750.1 1941262 R 754477 CDS YP_006293751.1 387130861 12844606 complement(1941888..1943771) 1 NC_017856.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1943771 12844606 Q7C_1923 Methylophaga frappieri tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_006293751.1 1941888 R 754477 CDS YP_006293752.1 387130862 12844607 1943913..1944269 1 NC_017856.1 PFAM: Prokaryotic diacylglycerol kinase; Diacylglycerol kinase 1944269 12844607 Q7C_1924 Methylophaga frappieri Diacylglycerol kinase YP_006293752.1 1943913 D 754477 CDS YP_006293753.1 387130863 12844608 complement(1944229..1945065) 1 NC_017856.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1945065 12844608 Q7C_1925 Methylophaga frappieri prolipoprotein diacylglyceryl transferase YP_006293753.1 1944229 R 754477 CDS YP_006293754.1 387130864 12844609 complement(1945087..1945200) 1 NC_017856.1 hypothetical protein 1945200 12844609 Q7C_1926 Methylophaga frappieri hypothetical protein YP_006293754.1 1945087 R 754477 CDS YP_006293755.1 387130865 12844610 1945327..1946034 1 NC_017856.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: hypothetical protein, proteobacterial; hypothetical protein 1946034 12844610 Q7C_1927 Methylophaga frappieri hypothetical protein YP_006293755.1 1945327 D 754477 CDS YP_006293756.1 387130866 12844611 1946097..1946435 1 NC_017856.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1946435 12844611 Q7C_1928 Methylophaga frappieri nitrogen regulatory protein P-II YP_006293756.1 1946097 D 754477 CDS YP_006293757.1 387130867 12844612 1946454..1947692 1 NC_017856.1 PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; Ammonium transporter 1947692 12844612 Q7C_1929 Methylophaga frappieri Ammonium transporter YP_006293757.1 1946454 D 754477 CDS YP_006293758.1 387130868 12844613 complement(1947819..1948886) 1 NC_017856.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; Uroporphyrinogen III decarboxylase 1948886 12844613 Q7C_1930 Methylophaga frappieri Uroporphyrinogen III decarboxylase YP_006293758.1 1947819 R 754477 CDS YP_006293759.1 387130869 12843830 complement(1948989..1949132) 1 NC_017856.1 hypothetical protein 1949132 12843830 Q7C_1931 Methylophaga frappieri hypothetical protein YP_006293759.1 1948989 R 754477 CDS YP_006293760.1 387130870 12843831 1949255..1949764 1 NC_017856.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 1949764 12843831 Q7C_1932 Methylophaga frappieri phosphoribosylaminoimidazole carboxylase catalytic subunit YP_006293760.1 1949255 D 754477 CDS YP_006293761.1 387130871 12843832 1949761..1950891 1 NC_017856.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; Phosphoribosylaminoimidazole carboxylase ATPase subunit 1950891 12843832 Q7C_1933 Methylophaga frappieri Phosphoribosylaminoimidazole carboxylase ATPase subunit YP_006293761.1 1949761 D 754477 CDS YP_006293762.1 387130872 12843833 1950918..1951169 1 NC_017856.1 PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; SelT/selW/selH selenoprotein 1951169 12843833 Q7C_1934 Methylophaga frappieri SelT/selW/selH selenoprotein YP_006293762.1 1950918 D 754477 CDS YP_006293763.1 387130873 12843834 complement(1951267..1953549) 1 NC_017856.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I 1953549 12843834 Q7C_1935 Methylophaga frappieri DNA topoisomerase I YP_006293763.1 1951267 R 754477 CDS YP_006293764.1 387130874 12843835 complement(1953632..1954099) 1 NC_017856.1 PFAM: Protein of unknown function (DUF494); hypothetical protein 1954099 12843835 Q7C_1936 Methylophaga frappieri hypothetical protein YP_006293764.1 1953632 R 754477 CDS YP_006293765.1 387130875 12843836 complement(1954122..1955198) 1 NC_017856.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; Rossmann fold nucleotide-binding protein Smf 1955198 12843836 Q7C_1937 Methylophaga frappieri Rossmann fold nucleotide-binding protein Smf YP_006293765.1 1954122 R 754477 CDS YP_006293766.1 387130876 12843837 complement(1955251..1956282) 1 NC_017856.1 PFAM: LysM domain; hypothetical protein 1956282 12843837 Q7C_1938 Methylophaga frappieri hypothetical protein YP_006293766.1 1955251 R 754477 CDS YP_006293767.1 387130877 12843838 1956554..1957057 1 NC_017856.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; Peptide deformylase 1957057 12843838 Q7C_1939 Methylophaga frappieri Peptide deformylase YP_006293767.1 1956554 D 754477 CDS YP_006293768.1 387130878 12843839 1957067..1957996 1 NC_017856.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; Methionyl-tRNA formyltransferase 1957996 12843839 Q7C_1940 Methylophaga frappieri Methionyl-tRNA formyltransferase YP_006293768.1 1957067 D 754477 CDS YP_006293769.1 387130879 12843840 1957989..1959296 1 NC_017856.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; Ribosomal RNA small subunit methyltransferase B 1959296 12843840 Q7C_1941 Methylophaga frappieri Ribosomal RNA small subunit methyltransferase B YP_006293769.1 1957989 D 754477 CDS YP_006293770.1 387130880 12843841 1959262..1959861 1 NC_017856.1 hypothetical protein 1959861 12843841 Q7C_1942 Methylophaga frappieri hypothetical protein YP_006293770.1 1959262 D 754477 CDS YP_006293771.1 387130881 12843842 1959846..1962002 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; nitrogen regulation protein ntrY 1962002 12843842 Q7C_1943 Methylophaga frappieri nitrogen regulation protein ntrY YP_006293771.1 1959846 D 754477 CDS YP_006293772.1 387130882 12843843 1962005..1963279 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; nitrogen assimilation regulatory protein NtrX 1963279 12843843 Q7C_1944 Methylophaga frappieri nitrogen assimilation regulatory protein NtrX YP_006293772.1 1962005 D 754477 CDS YP_006293773.1 387130883 12843844 1963289..1964668 1 NC_017856.1 PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 1964668 12843844 Q7C_1945 Methylophaga frappieri Trk system potassium uptake protein TrkA YP_006293773.1 1963289 D 754477 CDS YP_006293774.1 387130884 12843845 1964668..1965228 1 NC_017856.1 PFAM: Uncharacterized ACR, COG1678; hypothetical protein 1965228 12843845 Q7C_1946 Methylophaga frappieri hypothetical protein YP_006293774.1 1964668 D 754477 CDS YP_006293775.1 387130885 12843846 1965225..1965644 1 NC_017856.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; Holliday junction resolvase 1965644 12843846 Q7C_1947 Methylophaga frappieri Holliday junction resolvase YP_006293775.1 1965225 D 754477 CDS YP_006293776.1 387130886 12843847 1965641..1966174 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase 1966174 12843847 Q7C_1948 Methylophaga frappieri uracil phosphoribosyltransferase YP_006293776.1 1965641 D 754477 CDS YP_006293777.1 387130887 12843848 1966251..1967138 1 NC_017856.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 1967138 12843848 Q7C_1949 Methylophaga frappieri aspartate carbamoyltransferase YP_006293777.1 1966251 D 754477 CDS YP_006293778.1 387130888 12843849 1967135..1968409 1 NC_017856.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; Dihydroorotase 1968409 12843849 Q7C_1950 Methylophaga frappieri Dihydroorotase YP_006293778.1 1967135 D 754477 CDS YP_006293779.1 387130889 12843850 1968420..1969202 1 NC_017856.1 hypothetical protein 1969202 12843850 Q7C_1951 Methylophaga frappieri hypothetical protein YP_006293779.1 1968420 D 754477 CDS YP_006293780.1 387130890 12843852 complement(1969435..1970250) 1 NC_017856.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Blue (type 1) copper domain-containing protein 1970250 12843852 Q7C_1953 Methylophaga frappieri Blue (type 1) copper domain-containing protein YP_006293780.1 1969435 R 754477 CDS YP_006293781.1 387130891 12843853 complement(1970407..1970736) 1 NC_017856.1 hypothetical protein 1970736 12843853 Q7C_1954 Methylophaga frappieri hypothetical protein YP_006293781.1 1970407 R 754477 CDS YP_006293782.1 387130892 12843854 complement(1971177..1972277) 1 NC_017856.1 PFAM: Domain of unknown function DUF20; permease PerM (YfgO) 1972277 12843854 Q7C_1955 Methylophaga frappieri permease PerM (YfgO) YP_006293782.1 1971177 R 754477 CDS YP_006293783.1 387130893 12843855 complement(1972359..1972472) 1 NC_017856.1 hypothetical protein 1972472 12843855 Q7C_1956 Methylophaga frappieri hypothetical protein YP_006293783.1 1972359 R 754477 CDS YP_006293784.1 387130894 12843856 1972425..1973510 1 NC_017856.1 TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 1973510 12843856 Q7C_1957 Methylophaga frappieri RND family efflux transporter MFP subunit YP_006293784.1 1972425 D 754477 CDS YP_006293785.1 387130895 12843857 1973522..1976671 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; Acriflavin resistance protein 1976671 12843857 Q7C_1958 Methylophaga frappieri Acriflavin resistance protein YP_006293785.1 1973522 D 754477 CDS YP_006293786.1 387130896 12843858 complement(1976696..1977097) 1 NC_017856.1 PFAM: MAPEG family; hypothetical protein 1977097 12843858 Q7C_1959 Methylophaga frappieri hypothetical protein YP_006293786.1 1976696 R 754477 CDS YP_006293787.1 387130897 12843859 complement(1977169..1977381) 1 NC_017856.1 hypothetical protein 1977381 12843859 Q7C_1960 Methylophaga frappieri hypothetical protein YP_006293787.1 1977169 R 754477 CDS YP_006293788.1 387130898 12843860 complement(1977423..1978436) 1 NC_017856.1 PFAM: Fructose-1-6-bisphosphatase; Fructose-1,6-bisphosphatase, type I 1978436 12843860 Q7C_1961 Methylophaga frappieri Fructose-1,6-bisphosphatase, type I YP_006293788.1 1977423 R 754477 CDS YP_006293789.1 387130899 12843861 complement(1978467..1979285) 1 NC_017856.1 PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; Formylmethanofuran dehydrogenase subunit C 1979285 12843861 Q7C_1962 Methylophaga frappieri Formylmethanofuran dehydrogenase subunit C YP_006293789.1 1978467 R 754477 CDS YP_006293790.1 387130900 12843862 complement(1979282..1980184) 1 NC_017856.1 PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Formylmethanofuran--tetrahydromethanopterin N-formyltransferase 1980184 12843862 Q7C_1963 Methylophaga frappieri Formylmethanofuran--tetrahydromethanopterin N-formyltransferase YP_006293790.1 1979282 R 754477 CDS YP_006293791.1 387130901 12843863 complement(1980181..1981848) 1 NC_017856.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; Formylmethanofuran dehydrogenase subunit A 1981848 12843863 Q7C_1964 Methylophaga frappieri Formylmethanofuran dehydrogenase subunit A YP_006293791.1 1980181 R 754477 CDS YP_006293792.1 387130902 12843864 complement(1981851..1983131) 1 NC_017856.1 TIGRFAM: formylmethanofuran dehydrogenase subunit B; Formylmethanofuran dehydrogenase subunit B 1983131 12843864 Q7C_1965 Methylophaga frappieri Formylmethanofuran dehydrogenase subunit B YP_006293792.1 1981851 R 754477 CDS YP_006293793.1 387130903 12843865 complement(1983193..1983717) 1 NC_017856.1 PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; sporulation domain-containing protein 1983717 12843865 Q7C_1966 Methylophaga frappieri sporulation domain-containing protein YP_006293793.1 1983193 R 754477 CDS YP_006293794.1 387130904 12843866 complement(1983783..1985540) 1 NC_017856.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1985540 12843866 Q7C_1967 Methylophaga frappieri arginyl-tRNA synthetase YP_006293794.1 1983783 R 754477 CDS YP_006293795.1 387130905 12843867 complement(1985631..1987697) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; Helicase PriA essential for oriC/DnaA-independent DNA replication 1987697 12843867 Q7C_1968 Methylophaga frappieri Helicase PriA essential for oriC/DnaA-independent DNA replication YP_006293795.1 1985631 R 754477 CDS YP_006293796.1 387130906 12843868 1988005..1988139 1 NC_017856.1 hypothetical protein 1988139 12843868 Q7C_1969 Methylophaga frappieri hypothetical protein YP_006293796.1 1988005 D 754477 CDS YP_006293797.1 387130907 12843869 1988150..1988650 1 NC_017856.1 PFAM: Dihydrofolate reductase; Dihydrofolate reductase 1988650 12843869 Q7C_1970 Methylophaga frappieri Dihydrofolate reductase YP_006293797.1 1988150 D 754477 CDS YP_006293798.1 387130908 12843870 complement(1988631..1988864) 1 NC_017856.1 PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein; DNA-binding protein inhibitor Id-2-like protein 1988864 12843870 Q7C_1971 Methylophaga frappieri DNA-binding protein inhibitor Id-2-like protein YP_006293798.1 1988631 R 754477 CDS YP_006293799.1 387130909 12843871 complement(1988885..1991752) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 1991752 12843871 Q7C_1972 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293799.1 1988885 R 754477 CDS YP_006293800.1 387130910 12843872 complement(1991754..1992710) 1 NC_017856.1 PFAM: NMT1/THI5 like; ABC-type nitrate/sulfonate/bicarbonate transport system protein 1992710 12843872 Q7C_1973 Methylophaga frappieri ABC-type nitrate/sulfonate/bicarbonate transport system protein YP_006293800.1 1991754 R 754477 CDS YP_006293801.1 387130911 12843873 1992876..1993124 1 NC_017856.1 hypothetical protein 1993124 12843873 Q7C_1974 Methylophaga frappieri hypothetical protein YP_006293801.1 1992876 D 754477 CDS YP_006293802.1 387130912 12843874 1993128..1993481 1 NC_017856.1 PFAM: Pentapeptide repeats (8 copies); Pentapeptide repeat domain-containing protein 1993481 12843874 Q7C_1975 Methylophaga frappieri Pentapeptide repeat domain-containing protein YP_006293802.1 1993128 D 754477 CDS YP_006293803.1 387130913 12843875 complement(1993460..1994203) 1 NC_017856.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; Twin-arginine translocation protein TatC 1994203 12843875 Q7C_1976 Methylophaga frappieri Twin-arginine translocation protein TatC YP_006293803.1 1993460 R 754477 CDS YP_006293804.1 387130914 12843876 complement(1994196..1994483) 1 NC_017856.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB; Twin-arginine translocation protein TatB 1994483 12843876 Q7C_1977 Methylophaga frappieri Twin-arginine translocation protein TatB YP_006293804.1 1994196 R 754477 CDS YP_006293805.1 387130915 12843877 complement(1994490..1994735) 1 NC_017856.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; Twin-arginine translocation protein TatA 1994735 12843877 Q7C_1978 Methylophaga frappieri Twin-arginine translocation protein TatA YP_006293805.1 1994490 R 754477 CDS YP_006293806.1 387130916 12843878 complement(1994745..1995083) 1 NC_017856.1 PFAM: Scavenger mRNA decapping enzyme C-term binding; Histidine triad (HIT) protein 1995083 12843878 Q7C_1979 Methylophaga frappieri Histidine triad (HIT) protein YP_006293806.1 1994745 R 754477 CDS YP_006293807.1 387130917 12843879 complement(1995080..1995400) 1 NC_017856.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase 1995400 12843879 Q7C_1980 Methylophaga frappieri Phosphoribosyl-ATP pyrophosphatase YP_006293807.1 1995080 R 754477 CDS YP_006293808.1 387130918 12843880 complement(1995397..1995780) 1 NC_017856.1 PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1995780 12843880 Q7C_1981 Methylophaga frappieri phosphoribosyl-AMP cyclohydrolase YP_006293808.1 1995397 R 754477 CDS YP_006293809.1 387130919 12843881 complement(1995777..1996550) 1 NC_017856.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 1996550 12843881 Q7C_1982 Methylophaga frappieri Imidazole glycerol phosphate synthase cyclase subunit YP_006293809.1 1995777 R 754477 CDS YP_006293810.1 387130920 12843882 complement(1996550..1997299) 1 NC_017856.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1997299 12843882 Q7C_1983 Methylophaga frappieri Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006293810.1 1996550 R 754477 CDS YP_006293811.1 387130921 12843883 complement(1997324..1997956) 1 NC_017856.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Imidazole glycerol phosphate synthase amidotransferase subunit 1997956 12843883 Q7C_1984 Methylophaga frappieri Imidazole glycerol phosphate synthase amidotransferase subunit YP_006293811.1 1997324 R 754477 CDS YP_006293812.1 387130922 12843884 complement(1997991..1998584) 1 NC_017856.1 PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1998584 12843884 Q7C_1985 Methylophaga frappieri imidazoleglycerol-phosphate dehydratase YP_006293812.1 1997991 R 754477 CDS YP_006293813.1 387130923 12843885 1998550..1998675 1 NC_017856.1 hypothetical protein 1998675 12843885 Q7C_1986 Methylophaga frappieri hypothetical protein YP_006293813.1 1998550 D 754477 CDS YP_006293814.1 387130924 12843886 1998684..1999433 1 NC_017856.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Fumarate and nitrate reduction regulatory protein 1999433 12843886 Q7C_1987 Methylophaga frappieri Fumarate and nitrate reduction regulatory protein YP_006293814.1 1998684 D 754477 CDS YP_006293815.1 387130925 12843887 1999519..2000193 1 NC_017856.1 PFAM: OmpW family; OmpW family protein 2000193 12843887 Q7C_1988 Methylophaga frappieri OmpW family protein YP_006293815.1 1999519 D 754477 CDS YP_006293816.1 387130926 12843888 complement(2000206..2001744) 1 NC_017856.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; peptidoglycan lipid II flippase MurJ 2001744 12843888 Q7C_1989 Methylophaga frappieri peptidoglycan lipid II flippase MurJ YP_006293816.1 2000206 R 754477 CDS YP_006293817.1 387130927 12843889 complement(2001829..2001963) 1 NC_017856.1 hypothetical protein 2001963 12843889 Q7C_1990 Methylophaga frappieri hypothetical protein YP_006293817.1 2001829 R 754477 CDS YP_006293818.1 387130928 12843890 2001942..2002424 1 NC_017856.1 hypothetical protein 2002424 12843890 Q7C_1991 Methylophaga frappieri hypothetical protein YP_006293818.1 2001942 D 754477 CDS YP_006293819.1 387130929 12843891 complement(2002413..2003324) 1 NC_017856.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Hydrogen peroxide-inducible genes activator 2003324 12843891 Q7C_1992 Methylophaga frappieri Hydrogen peroxide-inducible genes activator YP_006293819.1 2002413 R 754477 CDS YP_006293820.1 387130930 12843892 2003433..2003597 1 NC_017856.1 PFAM: Rubredoxin; Rubredoxin 2003597 12843892 Q7C_1993 Methylophaga frappieri Rubredoxin YP_006293820.1 2003433 D 754477 CDS YP_006293821.1 387130931 12843893 2003715..2004785 1 NC_017856.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA recombination and repair protein RecF 2004785 12843893 Q7C_1994 Methylophaga frappieri DNA recombination and repair protein RecF YP_006293821.1 2003715 D 754477 CDS YP_006293822.1 387130932 12843894 2004869..2007289 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 2007289 12843894 Q7C_1995 Methylophaga frappieri DNA gyrase subunit B YP_006293822.1 2004869 D 754477 CDS YP_006293823.1 387130933 12843895 complement(2007392..2008705) 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase 2008705 12843895 Q7C_1996 Methylophaga frappieri NADH dehydrogenase YP_006293823.1 2007392 R 754477 CDS YP_006293824.1 387130934 12843896 2008848..2009408 1 NC_017856.1 PFAM: Flavoprotein; Archaeal flavoprotein 2009408 12843896 Q7C_1997 Methylophaga frappieri Archaeal flavoprotein YP_006293824.1 2008848 D 754477 CDS YP_006293825.1 387130935 12843897 2009401..2010957 1 NC_017856.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein; Dihydropteroate synthase-like protein 2010957 12843897 Q7C_1998 Methylophaga frappieri Dihydropteroate synthase-like protein YP_006293825.1 2009401 D 754477 CDS YP_006293826.1 387130936 12843898 2010945..2011523 1 NC_017856.1 PFAM: Protein of unknown function (DUF447); hypothetical protein 2011523 12843898 Q7C_1999 Methylophaga frappieri hypothetical protein YP_006293826.1 2010945 D 754477 CDS YP_006293827.1 387130937 12843899 2011513..2012199 1 NC_017856.1 PFAM: Protein of unknown function (DUF556); hypothetical protein 2012199 12843899 Q7C_2000 Methylophaga frappieri hypothetical protein YP_006293827.1 2011513 D 754477 CDS YP_006293828.1 387130938 12843900 2012352..2013125 1 NC_017856.1 PFAM: ATP dependent DNA ligase domain; DNA ligase 2013125 12843900 Q7C_2001 Methylophaga frappieri DNA ligase YP_006293828.1 2012352 D 754477 CDS YP_006293829.1 387130939 12843901 2013373..2014116 1 NC_017856.1 hypothetical protein 2014116 12843901 Q7C_2002 Methylophaga frappieri hypothetical protein YP_006293829.1 2013373 D 754477 CDS YP_006293830.1 387130940 12843902 complement(2014360..2016639) 1 NC_017856.1 PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2016639 12843902 Q7C_2003 Methylophaga frappieri 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_006293830.1 2014360 R 754477 CDS YP_006293831.1 387130941 12843903 complement(2016844..2017641) 1 NC_017856.1 PFAM: Response regulator receiver domain; chemotaxis regulator 2017641 12843903 Q7C_2004 Methylophaga frappieri chemotaxis regulator YP_006293831.1 2016844 R 754477 CDS YP_006293832.1 387130942 12843904 complement(2017656..2018207) 1 NC_017856.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; hypothetical protein 2018207 12843904 Q7C_2005 Methylophaga frappieri hypothetical protein YP_006293832.1 2017656 R 754477 CDS YP_006293833.1 387130943 12843905 complement(2018215..2019561) 1 NC_017856.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Carboxyl-terminal protease 2019561 12843905 Q7C_2006 Methylophaga frappieri Carboxyl-terminal protease YP_006293833.1 2018215 R 754477 CDS YP_006293834.1 387130944 12843906 complement(2019583..2020674) 1 NC_017856.1 PFAM: Peptidase family M23; Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP 2020674 12843906 Q7C_2007 Methylophaga frappieri Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP YP_006293834.1 2019583 R 754477 CDS YP_006293835.1 387130945 12843907 complement(2020730..2022265) 1 NC_017856.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2022265 12843907 Q7C_2008 Methylophaga frappieri 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006293835.1 2020730 R 754477 CDS YP_006293836.1 387130946 12843908 2022579..2022998 1 NC_017856.1 PFAM: Rhodanese-like domain; Rhodanese-like sulfurtransferase 2022998 12843908 Q7C_2009 Methylophaga frappieri Rhodanese-like sulfurtransferase YP_006293836.1 2022579 D 754477 CDS YP_006293837.1 387130947 12843909 2023012..2023263 1 NC_017856.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; glutaredoxin 2023263 12843909 Q7C_2010 Methylophaga frappieri glutaredoxin YP_006293837.1 2023012 D 754477 CDS YP_006293838.1 387130948 12843910 2023300..2023791 1 NC_017856.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; protein export cytoplasm chaperone protein 2023791 12843910 Q7C_2011 Methylophaga frappieri protein export cytoplasm chaperone protein YP_006293838.1 2023300 D 754477 CDS YP_006293839.1 387130949 12843911 2023813..2024841 1 NC_017856.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase 2024841 12843911 Q7C_2012 Methylophaga frappieri glycerol-3-phosphate dehydrogenase YP_006293839.1 2023813 D 754477 CDS YP_006293840.1 387130950 12843912 2024881..2025756 1 NC_017856.1 hypothetical protein 2025756 12843912 Q7C_2013 Methylophaga frappieri hypothetical protein YP_006293840.1 2024881 D 754477 CDS YP_006293841.1 387130951 12843913 complement(2025796..2026965) 1 NC_017856.1 PFAM: Uncharacterized ACR, COG1565; hypothetical protein 2026965 12843913 Q7C_2014 Methylophaga frappieri hypothetical protein YP_006293841.1 2025796 R 754477 CDS YP_006293842.1 387130952 12843914 2026981..2027697 1 NC_017856.1 PFAM: short chain dehydrogenase; FolM Alternative dihydrofolate reductase 1 2027697 12843914 Q7C_2015 Methylophaga frappieri FolM Alternative dihydrofolate reductase 1 YP_006293842.1 2026981 D 754477 CDS YP_006293843.1 387130953 12843915 complement(2028153..2028503) 1 NC_017856.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; Dihydroneopterin aldolase 2028503 12843915 Q7C_2016 Methylophaga frappieri Dihydroneopterin aldolase YP_006293843.1 2028153 R 754477 CDS YP_006293844.1 387130954 12843916 2028545..2029174 1 NC_017856.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 2029174 12843916 Q7C_2017 Methylophaga frappieri Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY YP_006293844.1 2028545 D 754477 CDS YP_006293845.1 387130955 12843917 complement(2029166..2030179) 1 NC_017856.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA 2030179 12843917 Q7C_2018 Methylophaga frappieri YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA YP_006293845.1 2029166 R 754477 CDS YP_006293846.1 387130956 12843918 2030314..2030529 1 NC_017856.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 2030529 12843918 Q7C_2019 Methylophaga frappieri 30S ribosomal protein S21 YP_006293846.1 2030314 D 754477 CDS YP_006293847.1 387130957 12843919 2030547..2031008 1 NC_017856.1 PFAM: Yqey-like protein; transamidase GatB domain-containing protein 2031008 12843919 Q7C_2020 Methylophaga frappieri transamidase GatB domain-containing protein YP_006293847.1 2030547 D 754477 CDS YP_006293848.1 387130958 12843920 2031078..2032814 1 NC_017856.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase 2032814 12843920 Q7C_2021 Methylophaga frappieri DNA primase YP_006293848.1 2031078 D 754477 CDS YP_006293849.1 387130959 12843921 2032907..2034745 1 NC_017856.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma factor RpoD 2034745 12843921 Q7C_2022 Methylophaga frappieri RNA polymerase sigma factor RpoD YP_006293849.1 2032907 D 754477 CDS YP_006293850.1 387130960 12843923 complement(2034873..2035013) 1 NC_017856.1 hypothetical protein 2035013 12843923 Q7C_2024 Methylophaga frappieri hypothetical protein YP_006293850.1 2034873 R 754477 CDS YP_006293851.1 387130961 12843924 complement(2035042..2035830) 1 NC_017856.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin oxidoreductase( ) 2035830 12843924 Q7C_2025 Methylophaga frappieri flavodoxin oxidoreductase( ) YP_006293851.1 2035042 R 754477 CDS YP_006293852.1 387130962 12843925 2035941..2036849 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Transcriptional activator MetR 2036849 12843925 Q7C_2026 Methylophaga frappieri Transcriptional activator MetR YP_006293852.1 2035941 D 754477 CDS YP_006293853.1 387130963 12843926 2037049..2038026 1 NC_017856.1 PFAM: Domain of unknown function (DUF1852); hypothetical protein 2038026 12843926 Q7C_2027 Methylophaga frappieri hypothetical protein YP_006293853.1 2037049 D 754477 CDS YP_006293854.1 387130964 12843927 2038048..2039076 1 NC_017856.1 PFAM: Cobalamin-independent synthase, Catalytic domain; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2039076 12843927 Q7C_2028 Methylophaga frappieri 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_006293854.1 2038048 D 754477 CDS YP_006293855.1 387130965 12843928 2039162..2039992 1 NC_017856.1 PFAM: Sulfite exporter TauE/SafE; permease 2039992 12843928 Q7C_2029 Methylophaga frappieri permease YP_006293855.1 2039162 D 754477 CDS YP_006293856.1 387130966 12843929 complement(2040153..2040461) 1 NC_017856.1 PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); Hexameric tyrosine-coordinated heme protein (HTHP) 2040461 12843929 Q7C_2030 Methylophaga frappieri Hexameric tyrosine-coordinated heme protein (HTHP) YP_006293856.1 2040153 R 754477 CDS YP_006293857.1 387130967 12843930 2040563..2040982 1 NC_017856.1 PFAM: MarR family; Organic hydroperoxide resistance transcriptional regulator 2040982 12843930 Q7C_2031 Methylophaga frappieri Organic hydroperoxide resistance transcriptional regulator YP_006293857.1 2040563 D 754477 CDS YP_006293858.1 387130968 12843931 2041086..2041733 1 NC_017856.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase 2041733 12843931 Q7C_2032 Methylophaga frappieri Pyridoxamine 5'-phosphate oxidase YP_006293858.1 2041086 D 754477 CDS YP_006293859.1 387130969 12843932 complement(2041722..2043758) 1 NC_017856.1 PFAM: Site-specific recombinase; Site-specific recombinase 2043758 12843932 Q7C_2033 Methylophaga frappieri Site-specific recombinase YP_006293859.1 2041722 R 754477 CDS YP_006293860.1 387130970 12843933 complement(2043861..2044268) 1 NC_017856.1 PFAM: Ankyrin repeat; ankyrin 2044268 12843933 Q7C_2034 Methylophaga frappieri ankyrin YP_006293860.1 2043861 R 754477 CDS YP_006293861.1 387130971 12843934 complement(2044334..2044480) 1 NC_017856.1 PFAM: Entericidin EcnA/B family; small secreted protein 2044480 12843934 Q7C_2035 Methylophaga frappieri small secreted protein YP_006293861.1 2044334 R 754477 CDS YP_006293862.1 387130972 12843935 2044794..2045243 1 NC_017856.1 hypothetical protein 2045243 12843935 Q7C_2036 Methylophaga frappieri hypothetical protein YP_006293862.1 2044794 D 754477 CDS YP_006293863.1 387130973 12843936 2045249..2045797 1 NC_017856.1 PFAM: OmpA family; Outer membrane protein A precursor 2045797 12843936 Q7C_2037 Methylophaga frappieri Outer membrane protein A precursor YP_006293863.1 2045249 D 754477 CDS YP_006293864.1 387130974 12843937 2045810..2047213 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC 2047213 12843937 Q7C_2038 Methylophaga frappieri type I secretion outer membrane protein, TolC YP_006293864.1 2045810 D 754477 CDS YP_006293865.1 387130975 12843938 2047375..2047869 1 NC_017856.1 PFAM: Redoxin; Thiol peroxidase, Tpx-type 2047869 12843938 Q7C_2039 Methylophaga frappieri Thiol peroxidase, Tpx-type YP_006293865.1 2047375 D 754477 CDS YP_006293866.1 387130976 12843939 2047937..2048578 1 NC_017856.1 hypothetical protein 2048578 12843939 Q7C_2040 Methylophaga frappieri hypothetical protein YP_006293866.1 2047937 D 754477 CDS YP_006293867.1 387130977 12843940 complement(2048575..2049297) 1 NC_017856.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; CarD family transcriptional regulator 2049297 12843940 Q7C_2041 Methylophaga frappieri CarD family transcriptional regulator YP_006293867.1 2048575 R 754477 CDS YP_006293868.1 387130978 12843941 complement(2049432..2049596) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1328); small integral membrane protein 2049596 12843941 Q7C_2042 Methylophaga frappieri small integral membrane protein YP_006293868.1 2049432 R 754477 CDS YP_006293869.1 387130979 12843942 2049772..2049972 1 NC_017856.1 hypothetical protein 2049972 12843942 Q7C_2043 Methylophaga frappieri hypothetical protein YP_006293869.1 2049772 D 754477 CDS YP_006293870.1 387130980 12843943 2050049..2050318 1 NC_017856.1 PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 2050318 12843943 Q7C_2044 Methylophaga frappieri hypothetical protein YP_006293870.1 2050049 D 754477 CDS YP_006293871.1 387130981 12843944 2050334..2050777 1 NC_017856.1 PFAM: Protein of unknown function (DUF1469); hypothetical protein 2050777 12843944 Q7C_2045 Methylophaga frappieri hypothetical protein YP_006293871.1 2050334 D 754477 CDS YP_006293872.1 387130982 12843945 2050845..2051201 1 NC_017856.1 hypothetical protein 2051201 12843945 Q7C_2046 Methylophaga frappieri hypothetical protein YP_006293872.1 2050845 D 754477 CDS YP_006293873.1 387130983 12843946 2051212..2051403 1 NC_017856.1 hypothetical protein 2051403 12843946 Q7C_2047 Methylophaga frappieri hypothetical protein YP_006293873.1 2051212 D 754477 CDS YP_006293874.1 387130984 12843947 2051514..2052869 1 NC_017856.1 PFAM: Sodium:solute symporter family; Twin-arginine translocation pathway signal 2052869 12843947 Q7C_2048 Methylophaga frappieri Twin-arginine translocation pathway signal YP_006293874.1 2051514 D 754477 CDS YP_006293875.1 387130985 12843948 complement(2052889..2053431) 1 NC_017856.1 PFAM: Lipocalin-like domain; lipoprotein Blc 2053431 12843948 Q7C_2049 Methylophaga frappieri lipoprotein Blc YP_006293875.1 2052889 R 754477 CDS YP_006293876.1 387130986 12843949 2053499..2053741 1 NC_017856.1 hypothetical protein 2053741 12843949 Q7C_2050 Methylophaga frappieri hypothetical protein YP_006293876.1 2053499 D 754477 CDS YP_006293877.1 387130987 12843950 2053815..2053982 1 NC_017856.1 hypothetical protein 2053982 12843950 Q7C_2051 Methylophaga frappieri hypothetical protein YP_006293877.1 2053815 D 754477 CDS YP_006293878.1 387130988 12843951 2054142..2054567 1 NC_017856.1 hypothetical protein 2054567 12843951 Q7C_2052 Methylophaga frappieri hypothetical protein YP_006293878.1 2054142 D 754477 CDS YP_006293879.1 387130989 12843952 2054583..2054723 1 NC_017856.1 hypothetical protein 2054723 12843952 Q7C_2053 Methylophaga frappieri hypothetical protein YP_006293879.1 2054583 D 754477 CDS YP_006293880.1 387130990 12843953 complement(2054879..2058199) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 2058199 12843953 Q7C_2054 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293880.1 2054879 R 754477 CDS YP_006293881.1 387130991 12843954 complement(2058196..2058348) 1 NC_017856.1 hypothetical protein 2058348 12843954 Q7C_2055 Methylophaga frappieri hypothetical protein YP_006293881.1 2058196 R 754477 CDS YP_006293882.1 387130992 12843955 complement(2058464..2058589) 1 NC_017856.1 hypothetical protein 2058589 12843955 Q7C_2056 Methylophaga frappieri hypothetical protein YP_006293882.1 2058464 R 754477 CDS YP_006293883.1 387130993 12843956 2058704..2060344 1 NC_017856.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; hypothetical protein 2060344 12843956 Q7C_2057 Methylophaga frappieri hypothetical protein YP_006293883.1 2058704 D 754477 CDS YP_006293884.1 387130994 12843957 2060354..2061805 1 NC_017856.1 PFAM: Aldehyde dehydrogenase family; Aldehyde dehydrogenase 2061805 12843957 Q7C_2058 Methylophaga frappieri Aldehyde dehydrogenase YP_006293884.1 2060354 D 754477 CDS YP_006293885.1 387130995 12843958 complement(2061863..2062333) 1 NC_017856.1 PFAM: Ferritin-like domain; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase 2062333 12843958 Q7C_2059 Methylophaga frappieri Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase YP_006293885.1 2061863 R 754477 CDS YP_006293886.1 387130996 12843959 complement(2062571..2063746) 1 NC_017856.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2063746 12843959 Q7C_2060 Methylophaga frappieri cyclopropane-fatty-acyl-phospholipid synthase YP_006293886.1 2062571 R 754477 CDS YP_006293887.1 387130997 12843960 2063804..2064010 1 NC_017856.1 hypothetical protein 2064010 12843960 Q7C_2061 Methylophaga frappieri hypothetical protein YP_006293887.1 2063804 D 754477 CDS YP_006293888.1 387130998 12843961 2064108..2064353 1 NC_017856.1 PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 2064353 12843961 Q7C_2062 Methylophaga frappieri Peptidase propeptide domain-containing protein YP_006293888.1 2064108 D 754477 CDS YP_006293889.1 387130999 12843962 2064416..2065018 1 NC_017856.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; DNA-binding response regulator 2065018 12843962 Q7C_2063 Methylophaga frappieri DNA-binding response regulator YP_006293889.1 2064416 D 754477 CDS YP_006293890.1 387131000 12843963 2065015..2066352 1 NC_017856.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 2066352 12843963 Q7C_2064 Methylophaga frappieri Sensor protein PhoQ YP_006293890.1 2065015 D 754477 CDS YP_006293891.1 387131001 12843964 complement(2066429..2066734) 1 NC_017856.1 PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 2066734 12843964 Q7C_2065 Methylophaga frappieri Peptidase propeptide domain-containing protein YP_006293891.1 2066429 R 754477 CDS YP_006293892.1 387131002 12843965 complement(2066830..2066949) 1 NC_017856.1 hypothetical protein 2066949 12843965 Q7C_2066 Methylophaga frappieri hypothetical protein YP_006293892.1 2066830 R 754477 CDS YP_006293893.1 387131003 12843966 2067016..2067141 1 NC_017856.1 hypothetical protein 2067141 12843966 Q7C_2067 Methylophaga frappieri hypothetical protein YP_006293893.1 2067016 D 754477 CDS YP_006293894.1 387131004 12843967 2067119..2067550 1 NC_017856.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR 2067550 12843967 Q7C_2068 Methylophaga frappieri nitrite-sensitive transcriptional repressor NsrR YP_006293894.1 2067119 D 754477 CDS YP_006293895.1 387131005 12843968 2067733..2070690 1 NC_017856.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 2070690 12843968 Q7C_2069 Methylophaga frappieri sensor histidine kinase with a response regulator receiver domain YP_006293895.1 2067733 D 754477 CDS YP_006293896.1 387131006 12843969 2070690..2072855 1 NC_017856.1 PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 2072855 12843969 Q7C_2070 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006293896.1 2070690 D 754477 CDS YP_006293897.1 387131007 12843970 2072878..2074242 1 NC_017856.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; glutathione reductase 2074242 12843970 Q7C_2071 Methylophaga frappieri glutathione reductase YP_006293897.1 2072878 D 754477 CDS YP_006293898.1 387131008 12843971 2074598..2076727 1 NC_017856.1 PFAM: SNARE associated Golgi protein; Phospholipase D Active site motif; phospholipase D 2076727 12843971 Q7C_2072 Methylophaga frappieri phospholipase D YP_006293898.1 2074598 D 754477 CDS YP_006293899.1 387131009 12843972 2076727..2077419 1 NC_017856.1 PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 2077419 12843972 Q7C_2073 Methylophaga frappieri endonuclease/exonuclease/phosphatase YP_006293899.1 2076727 D 754477 CDS YP_006293900.1 387131010 12843973 2077505..2078230 1 NC_017856.1 PFAM: Proteasome subunit; proteasome-type protease 2078230 12843973 Q7C_2074 Methylophaga frappieri proteasome-type protease YP_006293900.1 2077505 D 754477 CDS YP_006293901.1 387131011 12843974 complement(2078217..2079221) 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2248); hypothetical protein 2079221 12843974 Q7C_2075 Methylophaga frappieri hypothetical protein YP_006293901.1 2078217 R 754477 CDS YP_006293902.1 387131012 12843975 complement(2079221..2080156) 1 NC_017856.1 PFAM: Bacterial domain of unknown function (DUF403); hypothetical protein 2080156 12843975 Q7C_2076 Methylophaga frappieri hypothetical protein YP_006293902.1 2079221 R 754477 CDS YP_006293903.1 387131013 12843976 complement(2080156..2081619) 1 NC_017856.1 PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407); hypothetical protein 2081619 12843976 Q7C_2077 Methylophaga frappieri hypothetical protein YP_006293903.1 2080156 R 754477 CDS YP_006293904.1 387131014 12843977 complement(2081699..2083495) 1 NC_017856.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate carboxyl transferase subunit B 2083495 12843977 Q7C_2078 Methylophaga frappieri pyruvate carboxyl transferase subunit B YP_006293904.1 2081699 R 754477 CDS YP_006293905.1 387131015 12843978 complement(2083525..2084940) 1 NC_017856.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; Pyruvate carboxyl transferase subunit A 2084940 12843978 Q7C_2079 Methylophaga frappieri Pyruvate carboxyl transferase subunit A YP_006293905.1 2083525 R 754477 CDS YP_006293906.1 387131016 12843979 2085052..2086020 1 NC_017856.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 2086020 12843979 Q7C_2080 Methylophaga frappieri LysR family transcriptional regulator YP_006293906.1 2085052 D 754477 CDS YP_006293907.1 387131017 12843980 complement(2086017..2087312) 1 NC_017856.1 PFAM: Major Facilitator Superfamily; inner membrane protein 2087312 12843980 Q7C_2081 Methylophaga frappieri inner membrane protein YP_006293907.1 2086017 R 754477 CDS YP_006293908.1 387131018 12843981 complement(2087326..2088270) 1 NC_017856.1 PFAM: Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Aldo/keto reductase precursor 2088270 12843981 Q7C_2082 Methylophaga frappieri Aldo/keto reductase precursor YP_006293908.1 2087326 R 754477 CDS YP_006293909.1 387131019 12843982 2088471..2089334 1 NC_017856.1 PFAM: HDOD domain; signal transduction protein 2089334 12843982 Q7C_2083 Methylophaga frappieri signal transduction protein YP_006293909.1 2088471 D 754477 CDS YP_006293910.1 387131020 12843983 complement(2089393..2090103) 1 NC_017856.1 PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B 2090103 12843983 Q7C_2084 Methylophaga frappieri Copper resistance protein B YP_006293910.1 2089393 R 754477 CDS YP_006293911.1 387131021 12843984 complement(2090090..2091715) 1 NC_017856.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Multicopper oxidase 2091715 12843984 Q7C_2085 Methylophaga frappieri Multicopper oxidase YP_006293911.1 2090090 R 754477 CDS YP_006293912.1 387131022 12843985 2092316..2093917 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; two-component system response regulator-like protein 2093917 12843985 Q7C_2086 Methylophaga frappieri two-component system response regulator-like protein YP_006293912.1 2092316 D 754477 CDS YP_006293913.1 387131023 12843986 2093932..2094045 1 NC_017856.1 hypothetical protein 2094045 12843986 Q7C_2087 Methylophaga frappieri hypothetical protein YP_006293913.1 2093932 D 754477 CDS YP_006293914.1 387131024 12843987 complement(2094061..2094672) 1 NC_017856.1 PFAM: Predicted membrane protein (DUF2238); hypothetical protein 2094672 12843987 Q7C_2088 Methylophaga frappieri hypothetical protein YP_006293914.1 2094061 R 754477 CDS YP_006293915.1 387131025 12843989 2095104..2096396 1 NC_017856.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Phosphoribosylamine--glycine ligase 2096396 12843989 Q7C_2090 Methylophaga frappieri Phosphoribosylamine--glycine ligase YP_006293915.1 2095104 D 754477 CDS YP_006293916.1 387131026 12843990 2096421..2097290 1 NC_017856.1 PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase 2097290 12843990 Q7C_2091 Methylophaga frappieri Phosphoribulokinase YP_006293916.1 2096421 D 754477 CDS YP_006293917.1 387131027 12843991 2097313..2097876 1 NC_017856.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC family protein 2097876 12843991 Q7C_2092 Methylophaga frappieri Sua5/YciO/YrdC family protein YP_006293917.1 2097313 D 754477 CDS YP_006293918.1 387131028 12843992 2097873..2098787 1 NC_017856.1 PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase, aerobic 2098787 12843992 Q7C_2093 Methylophaga frappieri Coproporphyrinogen III oxidase, aerobic YP_006293918.1 2097873 D 754477 CDS YP_006293919.1 387131029 12843993 complement(2098791..2099879) 1 NC_017856.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 2099879 12843993 Q7C_2094 Methylophaga frappieri peptide chain release factor 1 YP_006293919.1 2098791 R 754477 CDS YP_006293920.1 387131030 12843994 complement(2099883..2101142) 1 NC_017856.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 2101142 12843994 Q7C_2095 Methylophaga frappieri glutamyl-tRNA reductase YP_006293920.1 2099883 R 754477 CDS YP_006293921.1 387131031 12843995 2101266..2103032 1 NC_017856.1 PFAM: Tetratricopeptide repeat; hypothetical protein 2103032 12843995 Q7C_2096 Methylophaga frappieri hypothetical protein YP_006293921.1 2101266 D 754477 CDS YP_006293922.1 387131032 12843996 2103029..2103628 1 NC_017856.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; Outer membrane lipoprotein LolB 2103628 12843996 Q7C_2097 Methylophaga frappieri Outer membrane lipoprotein LolB YP_006293922.1 2103029 D 754477 CDS YP_006293923.1 387131033 12843997 2103625..2104482 1 NC_017856.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2104482 12843997 Q7C_2098 Methylophaga frappieri 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_006293923.1 2103625 D 754477 CDS YP_006293924.1 387131034 12843999 2104607..2105593 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 2105593 12843999 Q7C_2100 Methylophaga frappieri ribose-phosphate pyrophosphokinase YP_006293924.1 2104607 D 754477 CDS YP_006293925.1 387131035 12844000 2105699..2106385 1 NC_017856.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 2106385 12844000 Q7C_2101 Methylophaga frappieri 50S ribosomal protein L25 YP_006293925.1 2105699 D 754477 CDS YP_006293926.1 387131036 12844001 2106409..2106984 1 NC_017856.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2106984 12844001 Q7C_2102 Methylophaga frappieri peptidyl-tRNA hydrolase YP_006293926.1 2106409 D 754477 CDS YP_006293927.1 387131037 12844002 2106994..2108085 1 NC_017856.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding and nucleic acid-binding protein YchF 2108085 12844002 Q7C_2103 Methylophaga frappieri GTP-binding and nucleic acid-binding protein YchF YP_006293927.1 2106994 D 754477 CDS YP_006293928.1 387131038 12844003 2108145..2109218 1 NC_017856.1 PFAM: Phospholipase A1; Phospholipase A1 precursor, Outer membrane phospholipase A 2109218 12844003 Q7C_2104 Methylophaga frappieri Phospholipase A1 precursor, Outer membrane phospholipase A YP_006293928.1 2108145 D 754477 CDS YP_006293929.1 387131039 12844005 2109856..2110197 1 NC_017856.1 PFAM: Bacterial regulatory protein, arsR family; Arsenical resistance operon repressor 2110197 12844005 Q7C_2106 Methylophaga frappieri Arsenical resistance operon repressor YP_006293929.1 2109856 D 754477 CDS YP_006293930.1 387131040 12844006 2110214..2110729 1 NC_017856.1 PFAM: Dual specificity phosphatase, catalytic domain; phosphatase family protein 2110729 12844006 Q7C_2107 Methylophaga frappieri phosphatase family protein YP_006293930.1 2110214 D 754477 CDS YP_006293931.1 387131041 12844007 2110719..2111732 1 NC_017856.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2111732 12844007 Q7C_2108 Methylophaga frappieri NAD-dependent glyceraldehyde-3-phosphate dehydrogenase YP_006293931.1 2110719 D 754477 CDS YP_006293932.1 387131042 12844008 2111738..2112961 1 NC_017856.1 PFAM: Major Facilitator Superfamily; Permease of the major facilitator superfamily 2112961 12844008 Q7C_2109 Methylophaga frappieri Permease of the major facilitator superfamily YP_006293932.1 2111738 D 754477 CDS YP_006293933.1 387131043 12844009 2113033..2113365 1 NC_017856.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family; hypothetical protein 2113365 12844009 Q7C_2110 Methylophaga frappieri hypothetical protein YP_006293933.1 2113033 D 754477 CDS YP_006293934.1 387131044 12844010 2113394..2114257 1 NC_017856.1 PFAM: Mechanosensitive ion channel; hypothetical protein 2114257 12844010 Q7C_2111 Methylophaga frappieri hypothetical protein YP_006293934.1 2113394 D 754477 CDS YP_006293935.1 387131045 12844011 2114330..2114728 1 NC_017856.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 2114728 12844011 Q7C_2112 Methylophaga frappieri Large-conductance mechanosensitive channel YP_006293935.1 2114330 D 754477 CDS YP_006293936.1 387131046 12844012 complement(2114734..2115162) 1 NC_017856.1 hypothetical protein 2115162 12844012 Q7C_2113 Methylophaga frappieri hypothetical protein YP_006293936.1 2114734 R 754477 CDS YP_006293937.1 387131047 12844013 complement(2115159..2115719) 1 NC_017856.1 hypothetical protein 2115719 12844013 Q7C_2114 Methylophaga frappieri hypothetical protein YP_006293937.1 2115159 R 754477 CDS YP_006293938.1 387131048 12844014 complement(2115697..2116092) 1 NC_017856.1 hypothetical protein 2116092 12844014 Q7C_2115 Methylophaga frappieri hypothetical protein YP_006293938.1 2115697 R 754477 CDS YP_006293939.1 387131049 12844015 complement(2116188..2117162) 1 NC_017856.1 MxaL protein 2117162 12844015 Q7C_2116 Methylophaga frappieri MxaL protein YP_006293939.1 2116188 R 754477 CDS YP_006293940.1 387131050 12844016 complement(2117189..2117758) 1 NC_017856.1 MxaK protein 2117758 12844016 Q7C_2117 Methylophaga frappieri MxaK protein YP_006293940.1 2117189 R 754477 CDS YP_006293941.1 387131051 12844017 complement(2117755..2118735) 1 NC_017856.1 PFAM: von Willebrand factor type A domain; MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase 2118735 12844017 Q7C_2118 Methylophaga frappieri MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase YP_006293941.1 2117755 R 754477 CDS YP_006293942.1 387131052 12844018 complement(2118732..2119667) 1 NC_017856.1 MxaA protein 2119667 12844018 Q7C_2119 Methylophaga frappieri MxaA protein YP_006293942.1 2118732 R 754477 CDS YP_006293943.1 387131053 12844019 complement(2119669..2120505) 1 NC_017856.1 hypothetical protein 2120505 12844019 Q7C_2120 Methylophaga frappieri hypothetical protein YP_006293943.1 2119669 R 754477 CDS YP_006293944.1 387131054 12844020 complement(2120502..2121536) 1 NC_017856.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 2121536 12844020 Q7C_2121 Methylophaga frappieri MoxR-like ATPase YP_006293944.1 2120502 R 754477 CDS YP_006293945.1 387131055 12844021 complement(2121597..2121872) 1 NC_017856.1 PFAM: Methanol dehydrogenase beta subunit; Methanol dehydrogenase, small subunit 2121872 12844021 Q7C_2122 Methylophaga frappieri Methanol dehydrogenase, small subunit YP_006293945.1 2121597 R 754477 CDS YP_006293946.1 387131056 12844022 complement(2121969..2122556) 1 NC_017856.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c(L), periplasmic; cytochrome c, class I 2122556 12844022 Q7C_2123 Methylophaga frappieri cytochrome c, class I YP_006293946.1 2121969 R 754477 CDS YP_006293947.1 387131057 12844023 complement(2122595..2123458) 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: methanol oxidation system protein MoxJ; MxaJ, protein involved in methanol oxidation 2123458 12844023 Q7C_2124 Methylophaga frappieri MxaJ, protein involved in methanol oxidation YP_006293947.1 2122595 R 754477 CDS YP_006293948.1 387131058 12844024 complement(2123554..2125443) 1 NC_017856.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein 2125443 12844024 Q7C_2125 Methylophaga frappieri Methanol dehydrogenase large subunit protein YP_006293948.1 2123554 R 754477 CDS YP_006293949.1 387131059 12844025 complement(2125626..2126282) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; nitrate/nitrite response regulator protein 2126282 12844025 Q7C_2126 Methylophaga frappieri nitrate/nitrite response regulator protein YP_006293949.1 2125626 R 754477 CDS YP_006293950.1 387131060 12844026 complement(2126299..2127216) 1 NC_017856.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific 2127216 12844026 Q7C_2127 Methylophaga frappieri signal transduction histidine kinase, glucose-6-phosphate specific YP_006293950.1 2126299 R 754477 CDS YP_006293951.1 387131061 12844027 2127360..2127485 1 NC_017856.1 hypothetical protein 2127485 12844027 Q7C_2128 Methylophaga frappieri hypothetical protein YP_006293951.1 2127360 D 754477 CDS YP_006293952.1 387131062 12844028 2127501..2127818 1 NC_017856.1 hypothetical protein 2127818 12844028 Q7C_2129 Methylophaga frappieri hypothetical protein YP_006293952.1 2127501 D 754477 CDS YP_006293953.1 387131063 12844029 2127843..2128361 1 NC_017856.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD protein 2128361 12844029 Q7C_2130 Methylophaga frappieri MxaD protein YP_006293953.1 2127843 D 754477 CDS YP_006293954.1 387131064 12844030 2128345..2129298 1 NC_017856.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein 2129298 12844030 Q7C_2131 Methylophaga frappieri hypothetical protein YP_006293954.1 2128345 D 754477 CDS YP_006293955.1 387131065 12844031 complement(2129317..2129790) 1 NC_017856.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA (cytosine34-2'-O-)-methyltransferase 2129790 12844031 Q7C_2132 Methylophaga frappieri tRNA (cytosine34-2'-O-)-methyltransferase YP_006293955.1 2129317 R 754477 CDS YP_006293956.1 387131066 12844032 complement(2129792..2131357) 1 NC_017856.1 PFAM: Transglycosylase SLT domain; LysM domain; membrane-bound lytic murein transglycosylase D 2131357 12844032 Q7C_2133 Methylophaga frappieri membrane-bound lytic murein transglycosylase D YP_006293956.1 2129792 R 754477 CDS YP_006293957.1 387131067 12844033 2131602..2132426 1 NC_017856.1 PFAM: Protein of unknown function (DUF2797); hypothetical protein 2132426 12844033 Q7C_2134 Methylophaga frappieri hypothetical protein YP_006293957.1 2131602 D 754477 CDS YP_006293958.1 387131068 12844034 2132423..2133451 1 NC_017856.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; Dihydroorotate dehydrogenase 2133451 12844034 Q7C_2135 Methylophaga frappieri Dihydroorotate dehydrogenase YP_006293958.1 2132423 D 754477 CDS YP_006293959.1 387131069 12844035 2133453..2134295 1 NC_017856.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 2134295 12844035 Q7C_2136 Methylophaga frappieri Potassium efflux system KefA protein / Small-conductance mechanosensitive channel YP_006293959.1 2133453 D 754477 CDS YP_006293960.1 387131070 12844036 complement(2134304..2135095) 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; Hydroxyacylglutathione hydrolase 2135095 12844036 Q7C_2137 Methylophaga frappieri Hydroxyacylglutathione hydrolase YP_006293960.1 2134304 R 754477 CDS YP_006293961.1 387131071 12844037 2135094..2135801 1 NC_017856.1 PFAM: Methyltransferase domain; SAM-dependent methyltransferase 2135801 12844037 Q7C_2138 Methylophaga frappieri SAM-dependent methyltransferase YP_006293961.1 2135094 D 754477 CDS YP_006293962.1 387131072 12844038 2135803..2136222 1 NC_017856.1 PFAM: RNase H; Ribonuclease HI 2136222 12844038 Q7C_2139 Methylophaga frappieri Ribonuclease HI YP_006293962.1 2135803 D 754477 CDS YP_006293963.1 387131073 12844039 2136225..2136959 1 NC_017856.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III subunit epsilon 2136959 12844039 Q7C_2140 Methylophaga frappieri DNA polymerase III subunit epsilon YP_006293963.1 2136225 D 754477 CDS YP_006293964.1 387131074 12844040 complement(2136951..2137064) 1 NC_017856.1 hypothetical protein 2137064 12844040 Q7C_2141 Methylophaga frappieri hypothetical protein YP_006293964.1 2136951 R 754477 CDS YP_006293965.1 387131075 12844041 2137087..2137620 1 NC_017856.1 PFAM: GrpE; Heat shock protein GrpE 2137620 12844041 Q7C_2142 Methylophaga frappieri Heat shock protein GrpE YP_006293965.1 2137087 D 754477 CDS YP_006293966.1 387131076 12844042 2137577..2137699 1 NC_017856.1 hypothetical protein 2137699 12844042 Q7C_2143 Methylophaga frappieri hypothetical protein YP_006293966.1 2137577 D 754477 CDS YP_006293967.1 387131077 12844043 2137727..2139646 1 NC_017856.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Chaperone protein DnaK 2139646 12844043 Q7C_2144 Methylophaga frappieri Chaperone protein DnaK YP_006293967.1 2137727 D 754477 CDS YP_006293968.1 387131078 12844044 2139726..2140841 1 NC_017856.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; Chaperone protein DnaJ 2140841 12844044 Q7C_2145 Methylophaga frappieri Chaperone protein DnaJ YP_006293968.1 2139726 D 754477 CDS YP_006293969.1 387131079 12844045 2140927..2141736 1 NC_017856.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; Dihydrodipicolinate reductase 2141736 12844045 Q7C_2146 Methylophaga frappieri Dihydrodipicolinate reductase YP_006293969.1 2140927 D 754477 CDS YP_006293970.1 387131080 12844046 complement(2141742..2142302) 1 NC_017856.1 hypothetical protein 2142302 12844046 Q7C_2147 Methylophaga frappieri hypothetical protein YP_006293970.1 2141742 R 754477 CDS YP_006293971.1 387131081 12844047 complement(2142302..2144638) 1 NC_017856.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; penicillin-binding protein, 1A family; Multimodular transpeptidase-transglycosylase 2144638 12844047 Q7C_2148 Methylophaga frappieri Multimodular transpeptidase-transglycosylase YP_006293971.1 2142302 R 754477 CDS YP_006293972.1 387131082 12844048 complement(2144757..2144903) 1 NC_017856.1 hypothetical protein 2144903 12844048 Q7C_2149 Methylophaga frappieri hypothetical protein YP_006293972.1 2144757 R 754477 CDS YP_006293973.1 387131083 12844049 2144998..2145468 1 NC_017856.1 PFAM: AhpC/TSA family; Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein 2145468 12844049 Q7C_2150 Methylophaga frappieri Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein YP_006293973.1 2144998 D 754477 CDS YP_006293974.1 387131084 12844050 2145495..2147483 1 NC_017856.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase 2147483 12844050 Q7C_2151 Methylophaga frappieri transketolase YP_006293974.1 2145495 D 754477 CDS YP_006293975.1 387131085 12844051 2147634..2148632 1 NC_017856.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2148632 12844051 Q7C_2152 Methylophaga frappieri NAD-dependent glyceraldehyde-3-phosphate dehydrogenase YP_006293975.1 2147634 D 754477 CDS YP_006293976.1 387131086 12844052 2148690..2149952 1 NC_017856.1 PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 2149952 12844052 Q7C_2153 Methylophaga frappieri phosphoglycerate kinase YP_006293976.1 2148690 D 754477 CDS YP_006293977.1 387131087 12844053 2149970..2151412 1 NC_017856.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 2151412 12844053 Q7C_2154 Methylophaga frappieri pyruvate kinase YP_006293977.1 2149970 D 754477 CDS YP_006293978.1 387131088 12844054 2151446..2152489 1 NC_017856.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Fructose-bisphosphate aldolase class II 2152489 12844054 Q7C_2155 Methylophaga frappieri Fructose-bisphosphate aldolase class II YP_006293978.1 2151446 D 754477 CDS YP_006293979.1 387131089 12844055 2152641..2153015 1 NC_017856.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB; CrcB protein 2153015 12844055 Q7C_2156 Methylophaga frappieri CrcB protein YP_006293979.1 2152641 D 754477 CDS YP_006293980.1 387131090 12844056 2153012..2153308 1 NC_017856.1 PFAM: Uncharacterized ACR, COG1993; hypothetical protein 2153308 12844056 Q7C_2157 Methylophaga frappieri hypothetical protein YP_006293980.1 2153012 D 754477 CDS YP_006293981.1 387131091 12844057 2153321..2154595 1 NC_017856.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 2154595 12844057 Q7C_2158 Methylophaga frappieri seryl-tRNA synthetase YP_006293981.1 2153321 D 754477 CDS YP_006293982.1 387131092 12844058 2154588..2155280 1 NC_017856.1 PFAM: Peptidase family M50; membrane metalloprotease 2155280 12844058 Q7C_2159 Methylophaga frappieri membrane metalloprotease YP_006293982.1 2154588 D 754477 CDS YP_006293983.1 387131093 12844059 2155305..2156483 1 NC_017856.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 2156483 12844059 Q7C_2160 Methylophaga frappieri tryptophanyl-tRNA synthetase YP_006293983.1 2155305 D 754477 CDS YP_006293984.1 387131094 12844060 complement(2156516..2157532) 1 NC_017856.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 2157532 12844060 Q7C_2161 Methylophaga frappieri tryptophanyl-tRNA synthetase YP_006293984.1 2156516 R 754477 CDS YP_006293985.1 387131095 12844061 2157765..2158682 1 NC_017856.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Ribosomal large subunit pseudouridine synthase B 2158682 12844061 Q7C_2162 Methylophaga frappieri Ribosomal large subunit pseudouridine synthase B YP_006293985.1 2157765 D 754477 CDS YP_006293986.1 387131096 12844062 complement(2158679..2159596) 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator 2159596 12844062 Q7C_2163 Methylophaga frappieri response regulator YP_006293986.1 2158679 R 754477 CDS YP_006293987.1 387131097 12844063 complement(2159688..2160431) 1 NC_017856.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase 2160431 12844063 Q7C_2164 Methylophaga frappieri short-chain dehydrogenase YP_006293987.1 2159688 R 754477 CDS YP_006293988.1 387131098 12844064 complement(2160445..2160816) 1 NC_017856.1 hypothetical protein 2160816 12844064 Q7C_2165 Methylophaga frappieri hypothetical protein YP_006293988.1 2160445 R 754477 CDS YP_006293989.1 387131099 12844065 complement(2160887..2162173) 1 NC_017856.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase; Phytoene desaturase, pro-zeta-carotene producing 2162173 12844065 Q7C_2166 Methylophaga frappieri Phytoene desaturase, pro-zeta-carotene producing YP_006293989.1 2160887 R 754477 CDS YP_006293990.1 387131100 12844066 complement(2162185..2163021) 1 NC_017856.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; phytoene synthase 2163021 12844066 Q7C_2167 Methylophaga frappieri phytoene synthase YP_006293990.1 2162185 R 754477 CDS YP_006293991.1 387131101 12844067 complement(2163063..2164031) 1 NC_017856.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 2164031 12844067 Q7C_2168 Methylophaga frappieri polyprenyl synthetase YP_006293991.1 2163063 R 754477 CDS YP_006293992.1 387131102 12844068 2164190..2164501 1 NC_017856.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 2164501 12844068 Q7C_2169 Methylophaga frappieri 50S ribosomal protein L21 YP_006293992.1 2164190 D 754477 CDS YP_006293993.1 387131103 12844069 2164539..2164796 1 NC_017856.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 2164796 12844069 Q7C_2170 Methylophaga frappieri 50S ribosomal protein L27 YP_006293993.1 2164539 D 754477 CDS YP_006293994.1 387131104 12844070 2164883..2165926 1 NC_017856.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTP-binding protein Obg 2165926 12844070 Q7C_2171 Methylophaga frappieri GTP-binding protein Obg YP_006293994.1 2164883 D 754477 CDS YP_006293995.1 387131105 12844071 2165929..2167059 1 NC_017856.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 2167059 12844071 Q7C_2172 Methylophaga frappieri glutamate 5-kinase YP_006293995.1 2165929 D 754477 CDS YP_006293996.1 387131106 12844072 complement(2167122..2167382) 1 NC_017856.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 2167382 12844072 Q7C_2173 Methylophaga frappieri 30S ribosomal protein S20 YP_006293996.1 2167122 R 754477 CDS YP_006293997.1 387131107 12844073 2167489..2168271 1 NC_017856.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); Exodeoxyribonuclease III 2168271 12844073 Q7C_2174 Methylophaga frappieri Exodeoxyribonuclease III YP_006293997.1 2167489 D 754477 CDS YP_006293998.1 387131108 12844074 complement(2168268..2170394) 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ 2170394 12844074 Q7C_2175 Methylophaga frappieri ATP-dependent DNA helicase RecQ YP_006293998.1 2168268 R 754477 CDS YP_006293999.1 387131109 12844075 complement(2170634..2171377) 1 NC_017856.1 hypothetical protein 2171377 12844075 Q7C_2176 Methylophaga frappieri hypothetical protein YP_006293999.1 2170634 R 754477 CDS YP_006294000.1 387131110 12844076 complement(2171470..2172558) 1 NC_017856.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA polymerase IV 2172558 12844076 Q7C_2177 Methylophaga frappieri DNA polymerase IV YP_006294000.1 2171470 R 754477 CDS YP_006294001.1 387131111 12844077 2172703..2174253 1 NC_017856.1 PFAM: Major Facilitator Superfamily; AmpG permease 2174253 12844077 Q7C_2178 Methylophaga frappieri AmpG permease YP_006294001.1 2172703 D 754477 CDS YP_006294002.1 387131112 12844078 complement(2174257..2175621) 1 NC_017856.1 PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase; decarboxylase 2175621 12844078 Q7C_2179 Methylophaga frappieri decarboxylase YP_006294002.1 2174257 R 754477 CDS YP_006294003.1 387131113 12844079 2175664..2175843 1 NC_017856.1 hypothetical protein 2175843 12844079 Q7C_2180 Methylophaga frappieri hypothetical protein YP_006294003.1 2175664 D 754477 CDS YP_006294004.1 387131114 12844080 2175843..2176511 1 NC_017856.1 PFAM: Uncharacterized BCR, COG1636; hypothetical protein 2176511 12844080 Q7C_2181 Methylophaga frappieri hypothetical protein YP_006294004.1 2175843 D 754477 CDS YP_006294005.1 387131115 12844081 complement(2176609..2176806) 1 NC_017856.1 PFAM: Helix-turn-helix; Cro/CI family transcriptional regulator 2176806 12844081 Q7C_2182 Methylophaga frappieri Cro/CI family transcriptional regulator YP_006294005.1 2176609 R 754477 CDS YP_006294006.1 387131116 12844082 complement(2176803..2177066) 1 NC_017856.1 hypothetical protein 2177066 12844082 Q7C_2183 Methylophaga frappieri hypothetical protein YP_006294006.1 2176803 R 754477 CDS YP_006294007.1 387131117 12844083 complement(2177473..2177946) 1 NC_017856.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein 2177946 12844083 Q7C_2184 Methylophaga frappieri ssDNA-binding protein YP_006294007.1 2177473 R 754477 CDS YP_006294008.1 387131118 12844084 complement(2177989..2179413) 1 NC_017856.1 PFAM: Major Facilitator Superfamily; transport protein 2179413 12844084 Q7C_2185 Methylophaga frappieri transport protein YP_006294008.1 2177989 R 754477 CDS YP_006294009.1 387131119 12844085 2179416..2182235 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 2182235 12844085 Q7C_2186 Methylophaga frappieri excinuclease ABC subunit A YP_006294009.1 2179416 D 754477 CDS YP_006294010.1 387131120 12844086 2182232..2182849 1 NC_017856.1 PFAM: CYTH domain; adenylate cyclase 2182849 12844086 Q7C_2187 Methylophaga frappieri adenylate cyclase YP_006294010.1 2182232 D 754477 CDS YP_006294011.1 387131121 12844087 complement(2182846..2183856) 1 NC_017856.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 2183856 12844087 Q7C_2188 Methylophaga frappieri Ferric siderophore transport system, periplasmic binding protein TonB YP_006294011.1 2182846 R 754477 CDS YP_006294012.1 387131122 12844088 complement(2183871..2184896) 1 NC_017856.1 PFAM: ApbE family; Thiamin biosynthesis lipoprotein ApbE 2184896 12844088 Q7C_2189 Methylophaga frappieri Thiamin biosynthesis lipoprotein ApbE YP_006294012.1 2183871 R 754477 CDS YP_006294013.1 387131123 12844089 complement(2184887..2185837) 1 NC_017856.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase 2185837 12844089 Q7C_2190 Methylophaga frappieri glutathione synthetase YP_006294013.1 2184887 R 754477 CDS YP_006294014.1 387131124 12844090 2186052..2186981 1 NC_017856.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 2186981 12844090 Q7C_2191 Methylophaga frappieri glycyl-tRNA synthetase subunit alpha YP_006294014.1 2186052 D 754477 CDS YP_006294015.1 387131125 12844091 2186978..2189047 1 NC_017856.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 2189047 12844091 Q7C_2192 Methylophaga frappieri glycyl-tRNA synthetase subunit beta YP_006294015.1 2186978 D 754477 CDS YP_006294016.1 387131126 12844092 2189060..2189596 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; Histidinol-phosphatase 2189596 12844092 Q7C_2193 Methylophaga frappieri Histidinol-phosphatase YP_006294016.1 2189060 D 754477 CDS YP_006294017.1 387131127 12844093 2189596..2190342 1 NC_017856.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2190342 12844093 Q7C_2194 Methylophaga frappieri 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006294017.1 2189596 D 754477 CDS YP_006294018.1 387131128 12844094 2190345..2192420 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2192420 12844094 Q7C_2195 Methylophaga frappieri response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_006294018.1 2190345 D 754477 CDS YP_006294019.1 387131129 12844095 complement(2192464..2193333) 1 NC_017856.1 PFAM: Peptidase family M48; protease htpX-like protein 2193333 12844095 Q7C_2196 Methylophaga frappieri protease htpX-like protein YP_006294019.1 2192464 R 754477 CDS YP_006294020.1 387131130 12844096 2193254..2193367 1 NC_017856.1 hypothetical protein 2193367 12844096 Q7C_2197 Methylophaga frappieri hypothetical protein YP_006294020.1 2193254 D 754477 CDS YP_006294021.1 387131131 12844097 complement(2193394..2193939) 1 NC_017856.1 PFAM: ATP-grasp domain; ATP-grasp domain-containing protein 2193939 12844097 Q7C_2198 Methylophaga frappieri ATP-grasp domain-containing protein YP_006294021.1 2193394 R 754477 CDS YP_006294022.1 387131132 12844098 2194125..2194265 1 NC_017856.1 hypothetical protein 2194265 12844098 Q7C_2199 Methylophaga frappieri hypothetical protein YP_006294022.1 2194125 D 754477 CDS YP_006294023.1 387131133 12844099 complement(2194498..2195259) 1 NC_017856.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Methylene tetrahydromethanopterin dehydrogenase 2195259 12844099 Q7C_2200 Methylophaga frappieri Methylene tetrahydromethanopterin dehydrogenase YP_006294023.1 2194498 R 754477 CDS YP_006294024.1 387131134 12844100 complement(2195397..2196407) 1 NC_017856.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase 2196407 12844100 Q7C_2201 Methylophaga frappieri beta-ribofuranosylaminobenzene 5'-phosphate synthase YP_006294024.1 2195397 R 754477 CDS YP_006294025.1 387131135 12844101 complement(2196451..2197317) 1 NC_017856.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Shikimate / quinate 5-dehydrogenase; Methylene tetrahydromethanopterin dehydrogenase 2197317 12844101 Q7C_2202 Methylophaga frappieri Methylene tetrahydromethanopterin dehydrogenase YP_006294025.1 2196451 R 754477 CDS YP_006294026.1 387131136 12844102 2197662..2197883 1 NC_017856.1 hypothetical protein 2197883 12844102 Q7C_2203 Methylophaga frappieri hypothetical protein YP_006294026.1 2197662 D 754477 CDS YP_006294027.1 387131137 12844103 complement(2197968..2198759) 1 NC_017856.1 PFAM: Sulphur oxidation protein SoxZ; hypothetical protein 2198759 12844103 Q7C_2204 Methylophaga frappieri hypothetical protein YP_006294027.1 2197968 R 754477 CDS YP_006294028.1 387131138 12844104 complement(2198839..2199639) 1 NC_017856.1 PFAM: Sulphur oxidation protein SoxZ; hypothetical protein 2199639 12844104 Q7C_2205 Methylophaga frappieri hypothetical protein YP_006294028.1 2198839 R 754477 CDS YP_006294029.1 387131139 12844105 complement(2199643..2200317) 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; metallo-beta-lactamase family protein 2200317 12844105 Q7C_2206 Methylophaga frappieri metallo-beta-lactamase family protein YP_006294029.1 2199643 R 754477 CDS YP_006294030.1 387131140 12844106 complement(2200371..2200541) 1 NC_017856.1 hypothetical protein 2200541 12844106 Q7C_2207 Methylophaga frappieri hypothetical protein YP_006294030.1 2200371 R 754477 CDS YP_006294031.1 387131141 12844107 2200644..2202044 1 NC_017856.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 2202044 12844107 Q7C_2208 Methylophaga frappieri glutamyl-tRNA synthetase YP_006294031.1 2200644 D 754477 CDS YP_006294032.1 387131142 12844108 2202261..2204039 1 NC_017856.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; Methanol dehydrogenase large subunit protein 2204039 12844108 Q7C_2209 Methylophaga frappieri Methanol dehydrogenase large subunit protein YP_006294032.1 2202261 D 754477 CDS YP_006294033.1 387131143 12844109 2204180..2205058 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein; MxaJ protein 2205058 12844109 Q7C_2210 Methylophaga frappieri MxaJ protein YP_006294033.1 2204180 D 754477 CDS YP_006294034.1 387131144 12844110 complement(2205089..2205538) 1 NC_017856.1 PFAM: Domain of unknown function DUF302; hypothetical protein 2205538 12844110 Q7C_2211 Methylophaga frappieri hypothetical protein YP_006294034.1 2205089 R 754477 CDS YP_006294035.1 387131145 12844111 2205612..2206298 1 NC_017856.1 hypothetical protein 2206298 12844111 Q7C_2212 Methylophaga frappieri hypothetical protein YP_006294035.1 2205612 D 754477 CDS YP_006294036.1 387131146 12844112 complement(2206697..2207095) 1 NC_017856.1 PFAM: Stringent starvation protein B; stringent starvation protein B 2207095 12844112 Q7C_2213 Methylophaga frappieri stringent starvation protein B YP_006294036.1 2206697 R 754477 CDS YP_006294037.1 387131147 12844113 complement(2207203..2207913) 1 NC_017856.1 PFAM: Cytochrome C1 family; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 2207913 12844113 Q7C_2214 Methylophaga frappieri ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit YP_006294037.1 2207203 R 754477 CDS YP_006294038.1 387131148 12844114 complement(2207910..2209124) 1 NC_017856.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD; Ubiquinol--cytochrome c reductase, cytochrome B subunit 2209124 12844114 Q7C_2215 Methylophaga frappieri Ubiquinol--cytochrome c reductase, cytochrome B subunit YP_006294038.1 2207910 R 754477 CDS YP_006294039.1 387131149 12844115 complement(2209124..2209720) 1 NC_017856.1 PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Ubiquinol-cytochrome C reductase iron-sulfur subunit 2209720 12844115 Q7C_2216 Methylophaga frappieri Ubiquinol-cytochrome C reductase iron-sulfur subunit YP_006294039.1 2209124 R 754477 CDS YP_006294040.1 387131150 12844116 complement(2209886..2210329) 1 NC_017856.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor (Cupredoxin) (Blue copper protein) 2210329 12844116 Q7C_2217 Methylophaga frappieri Pseudoazurin precursor (Cupredoxin) (Blue copper protein) YP_006294040.1 2209886 R 754477 CDS YP_006294041.1 387131151 12844117 2210782..2211021 1 NC_017856.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; hypothetical protein 2211021 12844117 Q7C_2218 Methylophaga frappieri hypothetical protein YP_006294041.1 2210782 D 754477 CDS YP_006294042.1 387131152 12844118 2211118..2212899 1 NC_017856.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase 2212899 12844118 Q7C_2219 Methylophaga frappieri Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase YP_006294042.1 2211118 D 754477 CDS YP_006294043.1 387131153 12844119 2212945..2214057 1 NC_017856.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase 2214057 12844119 Q7C_2220 Methylophaga frappieri quinolinate synthetase YP_006294043.1 2212945 D 754477 CDS YP_006294044.1 387131154 12844120 2214072..2214257 1 NC_017856.1 PFAM: Zinc-finger domain; hypothetical protein 2214257 12844120 Q7C_2221 Methylophaga frappieri hypothetical protein YP_006294044.1 2214072 D 754477 CDS YP_006294045.1 387131155 12844121 2214254..2214694 1 NC_017856.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; Thiamin-phosphate pyrophosphorylase-like protein 2214694 12844121 Q7C_2222 Methylophaga frappieri Thiamin-phosphate pyrophosphorylase-like protein YP_006294045.1 2214254 D 754477 CDS YP_006294046.1 387131156 12844122 complement(2214651..2214845) 1 NC_017856.1 PFAM: Domain of unknown function (DUF329); zinc-binding protein 2214845 12844122 Q7C_2223 Methylophaga frappieri zinc-binding protein YP_006294046.1 2214651 R 754477 CDS YP_006294047.1 387131157 12844123 complement(2214845..2215621) 1 NC_017856.1 PFAM: Protein of unknown function (DUF1342); hypothetical protein 2215621 12844123 Q7C_2224 Methylophaga frappieri hypothetical protein YP_006294047.1 2214845 R 754477 CDS YP_006294048.1 387131158 12844124 complement(2215628..2216239) 1 NC_017856.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 2216239 12844124 Q7C_2225 Methylophaga frappieri dephospho-CoA kinase YP_006294048.1 2215628 R 754477 CDS YP_006294049.1 387131159 12844125 complement(2216243..2217112) 1 NC_017856.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; Leader peptidase (Prepilin peptidase) / N-methyltransferase 2217112 12844125 Q7C_2226 Methylophaga frappieri Leader peptidase (Prepilin peptidase) / N-methyltransferase YP_006294049.1 2216243 R 754477 CDS YP_006294050.1 387131160 12844126 complement(2217112..2218353) 1 NC_017856.1 PFAM: Bacterial type II secretion system protein F domain; type IV fimbrial assembly protein PilC 2218353 12844126 Q7C_2227 Methylophaga frappieri type IV fimbrial assembly protein PilC YP_006294050.1 2217112 R 754477 CDS YP_006294051.1 387131161 12844127 complement(2218357..2220075) 1 NC_017856.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; type IV fimbrial assembly, ATPase PilB 2220075 12844127 Q7C_2228 Methylophaga frappieri type IV fimbrial assembly, ATPase PilB YP_006294051.1 2218357 R 754477 CDS YP_006294052.1 387131162 12844128 2220218..2220346 1 NC_017856.1 hypothetical protein 2220346 12844128 Q7C_2229 Methylophaga frappieri hypothetical protein YP_006294052.1 2220218 D 754477 CDS YP_006294053.1 387131163 12844129 2220353..2221600 1 NC_017856.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 2221600 12844129 Q7C_2230 Methylophaga frappieri diaminopimelate decarboxylase YP_006294053.1 2220353 D 754477 CDS YP_006294054.1 387131164 12844130 2221604..2222452 1 NC_017856.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 2222452 12844130 Q7C_2231 Methylophaga frappieri diaminopimelate epimerase YP_006294054.1 2221604 D 754477 CDS YP_006294055.1 387131165 12844131 2222428..2223132 1 NC_017856.1 PFAM: Protein of unknown function, DUF484; hypothetical protein 2223132 12844131 Q7C_2232 Methylophaga frappieri hypothetical protein YP_006294055.1 2222428 D 754477 CDS YP_006294056.1 387131166 12844132 2223116..2224036 1 NC_017856.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerC 2224036 12844132 Q7C_2233 Methylophaga frappieri tyrosine recombinase XerC YP_006294056.1 2223116 D 754477 CDS YP_006294057.1 387131167 12844133 complement(2224099..2226813) 1 NC_017856.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I 2226813 12844133 Q7C_2234 Methylophaga frappieri DNA polymerase I YP_006294057.1 2224099 R 754477 CDS YP_006294058.1 387131168 12844134 2226980..2227237 1 NC_017856.1 PFAM: Protein of unknown function (DUF2782); hypothetical protein 2227237 12844134 Q7C_2235 Methylophaga frappieri hypothetical protein YP_006294058.1 2226980 D 754477 CDS YP_006294059.1 387131169 12844135 2227260..2228216 1 NC_017856.1 PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Homoserine kinase 2228216 12844135 Q7C_2236 Methylophaga frappieri Homoserine kinase YP_006294059.1 2227260 D 754477 CDS YP_006294060.1 387131170 12844136 2228216..2229253 1 NC_017856.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; Lipopolysaccharide heptosyltransferase I 2229253 12844136 Q7C_2237 Methylophaga frappieri Lipopolysaccharide heptosyltransferase I YP_006294060.1 2228216 D 754477 CDS YP_006294061.1 387131171 12844137 2229281..2230720 1 NC_017856.1 PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase 2230720 12844137 Q7C_2238 Methylophaga frappieri ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase YP_006294061.1 2229281 D 754477 CDS YP_006294062.1 387131172 12844138 2230764..2231063 1 NC_017856.1 hypothetical protein 2231063 12844138 Q7C_2239 Methylophaga frappieri hypothetical protein YP_006294062.1 2230764 D 754477 CDS YP_006294063.1 387131173 12844139 complement(2231065..2231712) 1 NC_017856.1 hypothetical protein 2231712 12844139 Q7C_2240 Methylophaga frappieri hypothetical protein YP_006294063.1 2231065 R 754477 CDS YP_006294064.1 387131174 12844140 complement(2231813..2232640) 1 NC_017856.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; TC 3.A.1.7.1; phosphate transport ATP-binding protein PstB 2232640 12844140 Q7C_2241 Methylophaga frappieri phosphate transport ATP-binding protein PstB YP_006294064.1 2231813 R 754477 CDS YP_006294065.1 387131175 12844141 complement(2232656..2233558) 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; TC 3.A.1.7.1; phosphate ABC transporter permease 2233558 12844141 Q7C_2242 Methylophaga frappieri phosphate ABC transporter permease YP_006294065.1 2232656 R 754477 CDS YP_006294066.1 387131176 12844142 complement(2233555..2234532) 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; TC 3.A.1.7.1; phosphate ABC transporter permease 2234532 12844142 Q7C_2243 Methylophaga frappieri phosphate ABC transporter permease YP_006294066.1 2233555 R 754477 CDS YP_006294067.1 387131177 12844143 complement(2234655..2235713) 1 NC_017856.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein 2235713 12844143 Q7C_2244 Methylophaga frappieri phosphate ABC transporter substrate-binding protein YP_006294067.1 2234655 R 754477 CDS YP_006294068.1 387131178 12844144 complement(2235841..2236641) 1 NC_017856.1 PFAM: Aldo/keto reductase family; oxidoreductase, aldo/keto reductase family 2236641 12844144 Q7C_2245 Methylophaga frappieri oxidoreductase, aldo/keto reductase family YP_006294068.1 2235841 R 754477 CDS YP_006294069.1 387131179 12844145 complement(2236638..2237834) 1 NC_017856.1 PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 2237834 12844145 Q7C_2246 Methylophaga frappieri glycerol-3-phosphate dehydrogenase YP_006294069.1 2236638 R 754477 CDS YP_006294070.1 387131180 12844146 complement(2237831..2238391) 1 NC_017856.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; Phosphoheptose isomerase 1 2238391 12844146 Q7C_2247 Methylophaga frappieri Phosphoheptose isomerase 1 YP_006294070.1 2237831 R 754477 CDS YP_006294071.1 387131181 12844147 2238527..2239621 1 NC_017856.1 PFAM: Glycosyl transferases group 1; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG 2239621 12844147 Q7C_2248 Methylophaga frappieri UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG YP_006294071.1 2238527 D 754477 CDS YP_006294072.1 387131182 12844148 2239621..2240436 1 NC_017856.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase 2240436 12844148 Q7C_2249 Methylophaga frappieri Lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase YP_006294072.1 2239621 D 754477 CDS YP_006294073.1 387131183 12844149 2240429..2241766 1 NC_017856.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Serine/threonine protein kinase 2241766 12844149 Q7C_2250 Methylophaga frappieri Serine/threonine protein kinase YP_006294073.1 2240429 D 754477 CDS YP_006294074.1 387131184 12844150 complement(2241758..2242399) 1 NC_017856.1 PFAM: Polysaccharide pyruvyl transferase; pyruvyltransferase 2242399 12844150 Q7C_2251 Methylophaga frappieri pyruvyltransferase YP_006294074.1 2241758 R 754477 CDS YP_006294075.1 387131185 12844151 complement(2242536..2244263) 1 NC_017856.1 PFAM: Carbamoyltransferase; Carbamoyltransferase in large core OS assembly cluster 2244263 12844151 Q7C_2252 Methylophaga frappieri Carbamoyltransferase in large core OS assembly cluster YP_006294075.1 2242536 R 754477 CDS YP_006294076.1 387131186 12844152 complement(2244336..2245835) 1 NC_017856.1 hypothetical protein 2245835 12844152 Q7C_2253 Methylophaga frappieri hypothetical protein YP_006294076.1 2244336 R 754477 CDS YP_006294077.1 387131187 12844153 complement(2245836..2246645) 1 NC_017856.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 2246645 12844153 Q7C_2254 Methylophaga frappieri glycosyltransferase YP_006294077.1 2245836 R 754477 CDS YP_006294078.1 387131188 12844154 complement(2246661..2247617) 1 NC_017856.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; ADP-heptose--lipooligosaccharide heptosyltransferase II 2247617 12844154 Q7C_2255 Methylophaga frappieri ADP-heptose--lipooligosaccharide heptosyltransferase II YP_006294078.1 2246661 R 754477 CDS YP_006294079.1 387131189 12844155 complement(2247686..2248495) 1 NC_017856.1 PFAM: ZIP Zinc transporter; Zinc transporter, ZIP family 2248495 12844155 Q7C_2256 Methylophaga frappieri Zinc transporter, ZIP family YP_006294079.1 2247686 R 754477 CDS YP_006294080.1 387131190 12844156 complement(2248532..2249077) 1 NC_017856.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 2249077 12844156 Q7C_2257 Methylophaga frappieri hypothetical protein YP_006294080.1 2248532 R 754477 CDS YP_006294081.1 387131191 12844157 2249110..2249232 1 NC_017856.1 hypothetical protein 2249232 12844157 Q7C_2258 Methylophaga frappieri hypothetical protein YP_006294081.1 2249110 D 754477 CDS YP_006294082.1 387131192 12844158 complement(2249265..2250065) 1 NC_017856.1 PFAM: Inositol monophosphatase family; Inositol-1-monophosphatase 2250065 12844158 Q7C_2259 Methylophaga frappieri Inositol-1-monophosphatase YP_006294082.1 2249265 R 754477 CDS YP_006294083.1 387131193 12844159 2250148..2250867 1 NC_017856.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E 2250867 12844159 Q7C_2260 Methylophaga frappieri Ribosomal RNA small subunit methyltransferase E YP_006294083.1 2250148 D 754477 CDS YP_006294084.1 387131194 12844160 2250864..2251178 1 NC_017856.1 PFAM: Protein of unknown function (DUF3301); hypothetical protein 2251178 12844160 Q7C_2261 Methylophaga frappieri hypothetical protein YP_006294084.1 2250864 D 754477 CDS YP_006294085.1 387131195 12844161 2251187..2252062 1 NC_017856.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-N(5)-glutamine methyltransferase PrmC 2252062 12844161 Q7C_2262 Methylophaga frappieri protein-N(5)-glutamine methyltransferase PrmC YP_006294085.1 2251187 D 754477 CDS YP_006294086.1 387131196 12844162 2252059..2252820 1 NC_017856.1 PFAM: MoeZ/MoeB domain; ThiF family; Sulfur carrier protein adenylyltransferase ThiF 2252820 12844162 Q7C_2263 Methylophaga frappieri Sulfur carrier protein adenylyltransferase ThiF YP_006294086.1 2252059 D 754477 CDS YP_006294087.1 387131197 12844163 2252817..2253227 1 NC_017856.1 Mov34/MPN/PAD-1 family protein 2253227 12844163 Q7C_2264 Methylophaga frappieri Mov34/MPN/PAD-1 family protein YP_006294087.1 2252817 D 754477 CDS YP_006294088.1 387131198 12844164 2253224..2254549 1 NC_017856.1 PFAM: Putative modulator of DNA gyrase; PMID 12029038; TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex 2254549 12844164 Q7C_2265 Methylophaga frappieri TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex YP_006294088.1 2253224 D 754477 CDS YP_006294089.1 387131199 12844165 complement(2254560..2256731) 1 NC_017856.1 PFAM: PilZ domain; PilZ domain-containing protein 2256731 12844165 Q7C_2266 Methylophaga frappieri PilZ domain-containing protein YP_006294089.1 2254560 R 754477 CDS YP_006294090.1 387131200 12844166 complement(2256735..2257001) 1 NC_017856.1 PFAM: BolA-like protein; Cell division protein BolA 2257001 12844166 Q7C_2267 Methylophaga frappieri Cell division protein BolA YP_006294090.1 2256735 R 754477 CDS YP_006294091.1 387131201 12844167 complement(2256998..2257297) 1 NC_017856.1 PFAM: YCII-related domain; YciL protein 2257297 12844167 Q7C_2268 Methylophaga frappieri YciL protein YP_006294091.1 2256998 R 754477 CDS YP_006294092.1 387131202 12844168 complement(2257297..2257890) 1 NC_017856.1 PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A; Intracellular septation protein IspA 2257890 12844168 Q7C_2269 Methylophaga frappieri Intracellular septation protein IspA YP_006294092.1 2257297 R 754477 CDS YP_006294093.1 387131203 12844169 2257942..2258793 1 NC_017856.1 PFAM: PHP domain; metal-dependent phosphoesterase 2258793 12844169 Q7C_2270 Methylophaga frappieri metal-dependent phosphoesterase YP_006294093.1 2257942 D 754477 CDS YP_006294094.1 387131204 12844170 2258806..2259432 1 NC_017856.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; YciO family 2259432 12844170 Q7C_2271 Methylophaga frappieri YciO family YP_006294094.1 2258806 D 754477 CDS YP_006294095.1 387131205 12844171 2259429..2260100 1 NC_017856.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2260100 12844171 Q7C_2272 Methylophaga frappieri 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006294095.1 2259429 D 754477 CDS YP_006294096.1 387131206 12844173 complement(2262782..2263606) 1 NC_017856.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; nitrite transporter from formate/nitrite family 2263606 12844173 Q7C_2275 Methylophaga frappieri nitrite transporter from formate/nitrite family YP_006294096.1 2262782 R 754477 CDS YP_006294097.1 387131207 12844174 complement(2263780..2265903) 1 NC_017856.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 2265903 12844174 Q7C_2276 Methylophaga frappieri diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_006294097.1 2263780 R 754477 CDS YP_006294098.1 387131208 12844175 complement(2265973..2266842) 1 NC_017856.1 PFAM: short chain dehydrogenase; NAD(P)-dependent oxidoreductase EC-YbbO 2266842 12844175 Q7C_2277 Methylophaga frappieri NAD(P)-dependent oxidoreductase EC-YbbO YP_006294098.1 2265973 R 754477 CDS YP_006294099.1 387131209 12844176 2266930..2267763 1 NC_017856.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; Chemotaxis protein methyltransferase CheR 2267763 12844176 Q7C_2278 Methylophaga frappieri Chemotaxis protein methyltransferase CheR YP_006294099.1 2266930 D 754477 CDS YP_006294100.1 387131210 12844177 complement(2267744..2268403) 1 NC_017856.1 transmembrane protein 2268403 12844177 Q7C_2279 Methylophaga frappieri transmembrane protein YP_006294100.1 2267744 R 754477 CDS YP_006294101.1 387131211 12844178 2268458..2269216 1 NC_017856.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein 2269216 12844178 Q7C_2280 Methylophaga frappieri dinuclear metal center protein YP_006294101.1 2268458 D 754477 CDS YP_006294102.1 387131212 12844179 2269230..2270576 1 NC_017856.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); Ribonuclease BN 2270576 12844179 Q7C_2281 Methylophaga frappieri Ribonuclease BN YP_006294102.1 2269230 D 754477 CDS YP_006294103.1 387131213 12844180 2270569..2271786 1 NC_017856.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase 2271786 12844180 Q7C_2282 Methylophaga frappieri phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase YP_006294103.1 2270569 D 754477 CDS YP_006294104.1 387131214 12844181 2271767..2272222 1 NC_017856.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 2272222 12844181 Q7C_2283 Methylophaga frappieri deoxyuridine 5'-triphosphate nucleotidohydrolase YP_006294104.1 2271767 D 754477 CDS YP_006294105.1 387131215 12844182 2272222..2274876 1 NC_017856.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 2274876 12844182 Q7C_2284 Methylophaga frappieri phosphomannomutase YP_006294105.1 2272222 D 754477 CDS YP_006294106.1 387131216 12844183 2274903..2275805 1 NC_017856.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; Acetylglutamate kinase 2275805 12844183 Q7C_2285 Methylophaga frappieri Acetylglutamate kinase YP_006294106.1 2274903 D 754477 CDS YP_006294107.1 387131217 12844184 2275805..2276422 1 NC_017856.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator SlmA 2276422 12844184 Q7C_2286 Methylophaga frappieri transcriptional regulator SlmA YP_006294107.1 2275805 D 754477 CDS YP_006294108.1 387131218 12844185 2276419..2276841 1 NC_017856.1 hypothetical protein 2276841 12844185 Q7C_2287 Methylophaga frappieri hypothetical protein YP_006294108.1 2276419 D 754477 CDS YP_006294109.1 387131219 12844186 2276914..2278356 1 NC_017856.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 2278356 12844186 Q7C_2288 Methylophaga frappieri mannose-1-phosphate guanylyltransferase YP_006294109.1 2276914 D 754477 CDS YP_006294110.1 387131220 12844187 2278462..2280177 1 NC_017856.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, PrtD family; ABC-type protease/lipase transport system, ATPase and permease components 2280177 12844187 Q7C_2289 Methylophaga frappieri ABC-type protease/lipase transport system, ATPase and permease components YP_006294110.1 2278462 D 754477 CDS YP_006294111.1 387131221 12844188 2280174..2281523 1 NC_017856.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; type I secretion membrane fusion protein, HlyD 2281523 12844188 Q7C_2290 Methylophaga frappieri type I secretion membrane fusion protein, HlyD YP_006294111.1 2280174 D 754477 CDS YP_006294112.1 387131222 12844189 2281599..2282843 1 NC_017856.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 2282843 12844189 Q7C_2291 Methylophaga frappieri TolC family type I secretion outer membrane protein YP_006294112.1 2281599 D 754477 CDS YP_006294113.1 387131223 12844190 complement(2282835..2282948) 1 NC_017856.1 hypothetical protein 2282948 12844190 Q7C_2292 Methylophaga frappieri hypothetical protein YP_006294113.1 2282835 R 754477 CDS YP_006294114.1 387131224 12844191 2282847..2283956 1 NC_017856.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 2283956 12844191 Q7C_2293 Methylophaga frappieri glycosyltransferase YP_006294114.1 2282847 D 754477 CDS YP_006294115.1 387131225 12844192 2283960..2285036 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2285036 12844192 Q7C_2294 Methylophaga frappieri GDP-mannose 4,6-dehydratase YP_006294115.1 2283960 D 754477 CDS YP_006294116.1 387131226 12844193 2285108..2285893 1 NC_017856.1 PFAM: ABC-2 type transporter; O-antigen export system permease protein RfbD 2285893 12844193 Q7C_2295 Methylophaga frappieri O-antigen export system permease protein RfbD YP_006294116.1 2285108 D 754477 CDS YP_006294117.1 387131227 12844194 2285890..2287119 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 2287119 12844194 Q7C_2296 Methylophaga frappieri ABC transporter ATP-binding protein YP_006294117.1 2285890 D 754477 CDS YP_006294118.1 387131228 12844195 2287172..2288347 1 NC_017856.1 glycosyltransferase 2288347 12844195 Q7C_2297 Methylophaga frappieri glycosyltransferase YP_006294118.1 2287172 D 754477 CDS YP_006294119.1 387131229 12844196 2288344..2290086 1 NC_017856.1 PFAM: Glycosyl transferases group 1; glycosyltransferase WbpX 2290086 12844196 Q7C_2298 Methylophaga frappieri glycosyltransferase WbpX YP_006294119.1 2288344 D 754477 CDS YP_006294120.1 387131230 12844197 2290086..2291060 1 NC_017856.1 PFAM: Acyltransferase family; acyltransferase 2291060 12844197 Q7C_2299 Methylophaga frappieri acyltransferase YP_006294120.1 2290086 D 754477 CDS YP_006294121.1 387131231 12844198 2291212..2292288 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2292288 12844198 Q7C_2300 Methylophaga frappieri GDP-mannose 4,6-dehydratase YP_006294121.1 2291212 D 754477 CDS YP_006294122.1 387131232 12844199 2292285..2293130 1 NC_017856.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 2293130 12844199 Q7C_2301 Methylophaga frappieri UDP-glucose 4-epimerase YP_006294122.1 2292285 D 754477 CDS YP_006294123.1 387131233 12844200 2293213..2294205 1 NC_017856.1 PFAM: Methyltransferase domain; methylase 2294205 12844200 Q7C_2302 Methylophaga frappieri methylase YP_006294123.1 2293213 D 754477 CDS YP_006294124.1 387131234 12844201 complement(2294319..2294432) 1 NC_017856.1 hypothetical protein 2294432 12844201 Q7C_2303 Methylophaga frappieri hypothetical protein YP_006294124.1 2294319 R 754477 CDS YP_006294125.1 387131235 12844202 2294745..2298452 1 NC_017856.1 type I secretion target repeat protein 2298452 12844202 Q7C_2304 Methylophaga frappieri type I secretion target repeat protein YP_006294125.1 2294745 D 754477 CDS YP_006294126.1 387131236 12844203 2298687..2300090 1 NC_017856.1 S-layer protein 2300090 12844203 Q7C_2305 Methylophaga frappieri S-layer protein YP_006294126.1 2298687 D 754477 CDS YP_006294127.1 387131237 12844204 2300104..2302287 1 NC_017856.1 type I secretion target repeat protein 2302287 12844204 Q7C_2306 Methylophaga frappieri type I secretion target repeat protein YP_006294127.1 2300104 D 754477 CDS YP_006294128.1 387131238 12844205 2302284..2302397 1 NC_017856.1 hypothetical protein 2302397 12844205 Q7C_2307 Methylophaga frappieri hypothetical protein YP_006294128.1 2302284 D 754477 CDS YP_006294129.1 387131239 12844206 2302451..2304391 1 NC_017856.1 PFAM: Tetratricopeptide repeat; TPR domain-containing protein 2304391 12844206 Q7C_2308 Methylophaga frappieri TPR domain-containing protein YP_006294129.1 2302451 D 754477 CDS YP_006294130.1 387131240 12844207 2304597..2305184 1 NC_017856.1 PFAM: YceI-like domain; hypothetical protein 2305184 12844207 Q7C_2309 Methylophaga frappieri hypothetical protein YP_006294130.1 2304597 D 754477 CDS YP_006294131.1 387131241 12844208 2305518..2305730 1 NC_017856.1 hypothetical protein 2305730 12844208 Q7C_2310 Methylophaga frappieri hypothetical protein YP_006294131.1 2305518 D 754477 CDS YP_006294132.1 387131242 12844209 2305779..2306447 1 NC_017856.1 PFAM: 2OG-Fe(II) oxygenase superfamily; Iron-uptake factor PiuC 2306447 12844209 Q7C_2311 Methylophaga frappieri Iron-uptake factor PiuC YP_006294132.1 2305779 D 754477 CDS YP_006294133.1 387131243 12844210 2306478..2307305 1 NC_017856.1 PFAM: SapC; TC 3.A.1.5.5; Peptide transport system permease protein sapC 2307305 12844210 Q7C_2312 Methylophaga frappieri Peptide transport system permease protein sapC YP_006294133.1 2306478 D 754477 CDS YP_006294134.1 387131244 12844211 2307368..2308522 1 NC_017856.1 PFAM: Glycosyl transferases group 1; glycosyl transferase, group 1 family protein 2308522 12844211 Q7C_2313 Methylophaga frappieri glycosyl transferase, group 1 family protein YP_006294134.1 2307368 D 754477 CDS YP_006294135.1 387131245 12844212 2308558..2309766 1 NC_017856.1 PFAM: Trypsin; Calx-beta domain; Calx-beta domain-containing protein 2309766 12844212 Q7C_2314 Methylophaga frappieri Calx-beta domain-containing protein YP_006294135.1 2308558 D 754477 CDS YP_006294136.1 387131246 12844213 2309961..2322509 1 NC_017856.1 PFAM: von Willebrand factor type A domain; TIGRFAM: T1SS-143 repeat domain; VCBS repeat; RTX toxins-related Ca2+-binding protein 2322509 12844213 Q7C_2315 Methylophaga frappieri RTX toxins-related Ca2+-binding protein YP_006294136.1 2309961 D 754477 CDS YP_006294137.1 387131247 12844214 2322595..2323491 1 NC_017856.1 PFAM: Glycosyltransferase (GlcNAc); glycosyltransferase (GlcNAc) 2323491 12844214 Q7C_2316 Methylophaga frappieri glycosyltransferase (GlcNAc) YP_006294137.1 2322595 D 754477 CDS YP_006294138.1 387131248 12844215 2323554..2323721 1 NC_017856.1 hypothetical protein 2323721 12844215 Q7C_2317 Methylophaga frappieri hypothetical protein YP_006294138.1 2323554 D 754477 CDS YP_006294139.1 387131249 12844216 2323842..2324747 1 NC_017856.1 PFAM: Haemolysin-type calcium binding protein related domain; hemolysin-type calcium binding protein related domain-containing protein 2324747 12844216 Q7C_2318 Methylophaga frappieri hemolysin-type calcium binding protein related domain-containing protein YP_006294139.1 2323842 D 754477 CDS YP_006294140.1 387131250 12844217 complement(2324791..2325216) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilus assembly protein PilE 2325216 12844217 Q7C_2319 Methylophaga frappieri type IV pilus assembly protein PilE YP_006294140.1 2324791 R 754477 CDS YP_006294141.1 387131251 12844218 complement(2325206..2325508) 1 NC_017856.1 hypothetical protein 2325508 12844218 Q7C_2320 Methylophaga frappieri hypothetical protein YP_006294141.1 2325206 R 754477 CDS YP_006294142.1 387131252 12844219 complement(2325520..2329122) 1 NC_017856.1 PFAM: Neisseria PilC protein; type IV fimbrial biogenesis protein PilY1 2329122 12844219 Q7C_2321 Methylophaga frappieri type IV fimbrial biogenesis protein PilY1 YP_006294142.1 2325520 R 754477 CDS YP_006294143.1 387131253 12844220 complement(2329125..2329676) 1 NC_017856.1 type IV fimbrial biogenesis protein PilX 2329676 12844220 Q7C_2322 Methylophaga frappieri type IV fimbrial biogenesis protein PilX YP_006294143.1 2329125 R 754477 CDS YP_006294144.1 387131254 12844221 complement(2329673..2330680) 1 NC_017856.1 type IV fimbrial biogenesis protein PilW 2330680 12844221 Q7C_2323 Methylophaga frappieri type IV fimbrial biogenesis protein PilW YP_006294144.1 2329673 R 754477 CDS YP_006294145.1 387131255 12844222 complement(2330728..2331198) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilV 2331198 12844222 Q7C_2324 Methylophaga frappieri type IV fimbrial biogenesis protein PilV YP_006294145.1 2330728 R 754477 CDS YP_006294146.1 387131256 12844223 complement(2331195..2331755) 1 NC_017856.1 PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H; type IV fimbrial biogenesis protein FimT 2331755 12844223 Q7C_2325 Methylophaga frappieri type IV fimbrial biogenesis protein FimT YP_006294146.1 2331195 R 754477 CDS YP_006294147.1 387131257 12844224 2332012..2332413 1 NC_017856.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 2332413 12844224 Q7C_2326 Methylophaga frappieri flagellar basal-body rod protein FlgB YP_006294147.1 2332012 D 754477 CDS YP_006294148.1 387131258 12844225 2332416..2332829 1 NC_017856.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 2332829 12844225 Q7C_2327 Methylophaga frappieri flagellar basal-body rod protein FlgC YP_006294148.1 2332416 D 754477 CDS YP_006294149.1 387131259 12844226 2332844..2333527 1 NC_017856.1 PFAM: Flagellar hook capping protein; flagellar basal-body rod modification protein FlgD 2333527 12844226 Q7C_2328 Methylophaga frappieri flagellar basal-body rod modification protein FlgD YP_006294149.1 2332844 D 754477 CDS YP_006294150.1 387131260 12844227 2333540..2334835 1 NC_017856.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook protein FlgE 2334835 12844227 Q7C_2329 Methylophaga frappieri flagellar hook protein FlgE YP_006294150.1 2333540 D 754477 CDS YP_006294151.1 387131261 12844228 2334861..2335604 1 NC_017856.1 PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgF 2335604 12844228 Q7C_2330 Methylophaga frappieri flagellar basal-body rod protein FlgF YP_006294151.1 2334861 D 754477 CDS YP_006294152.1 387131262 12844229 2335645..2336430 1 NC_017856.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 2336430 12844229 Q7C_2331 Methylophaga frappieri flagellar basal-body rod protein FlgG YP_006294152.1 2335645 D 754477 CDS YP_006294153.1 387131263 12844230 2336602..2337312 1 NC_017856.1 PFAM: Flagellar L-ring protein; flagellar L-ring protein FlgH 2337312 12844230 Q7C_2332 Methylophaga frappieri flagellar L-ring protein FlgH YP_006294153.1 2336602 D 754477 CDS YP_006294154.1 387131264 12844231 2337325..2338422 1 NC_017856.1 PFAM: Flagellar P-ring protein; flagellar P-ring protein FlgI 2338422 12844231 Q7C_2333 Methylophaga frappieri flagellar P-ring protein FlgI YP_006294154.1 2337325 D 754477 CDS YP_006294155.1 387131265 12844232 2338422..2339429 1 NC_017856.1 PFAM: Rod binding protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; flagellar protein FlgJ (peptidoglycan hydrolase) 2339429 12844232 Q7C_2334 Methylophaga frappieri flagellar protein FlgJ (peptidoglycan hydrolase) YP_006294155.1 2338422 D 754477 CDS YP_006294156.1 387131266 12844233 2339431..2341161 1 NC_017856.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 2341161 12844233 Q7C_2335 Methylophaga frappieri flagellar hook-associated protein FlgK YP_006294156.1 2339431 D 754477 CDS YP_006294157.1 387131267 12844234 2341171..2342376 1 NC_017856.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein FlgL 2342376 12844234 Q7C_2336 Methylophaga frappieri flagellar hook-associated protein FlgL YP_006294157.1 2341171 D 754477 CDS YP_006294158.1 387131268 12844235 2342541..2344346 1 NC_017856.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaB 2344346 12844235 Q7C_2337 Methylophaga frappieri flagellin protein FlaB YP_006294158.1 2342541 D 754477 CDS YP_006294159.1 387131269 12844236 2344641..2346437 1 NC_017856.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaB 2346437 12844236 Q7C_2338 Methylophaga frappieri flagellin protein FlaB YP_006294159.1 2344641 D 754477 CDS YP_006294160.1 387131270 12844237 2346503..2346898 1 NC_017856.1 PFAM: FlaG protein; flagellin protein FlaG 2346898 12844237 Q7C_2339 Methylophaga frappieri flagellin protein FlaG YP_006294160.1 2346503 D 754477 CDS YP_006294161.1 387131271 12844238 2346919..2348292 1 NC_017856.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif; flagellar hook-associated protein FliD 2348292 12844238 Q7C_2340 Methylophaga frappieri flagellar hook-associated protein FliD YP_006294161.1 2346919 D 754477 CDS YP_006294162.1 387131272 12844239 2348403..2348831 1 NC_017856.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthesis protein FliS 2348831 12844239 Q7C_2341 Methylophaga frappieri flagellar biosynthesis protein FliS YP_006294162.1 2348403 D 754477 CDS YP_006294163.1 387131273 12844240 2348832..2349152 1 NC_017856.1 PFAM: Flagellar protein FliT; flagellar protein FliT 2349152 12844240 Q7C_2342 Methylophaga frappieri flagellar protein FliT YP_006294163.1 2348832 D 754477 CDS YP_006294164.1 387131274 12844241 2349261..2350730 1 NC_017856.1 PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2350730 12844241 Q7C_2343 Methylophaga frappieri flagellar regulatory protein FleQ YP_006294164.1 2349261 D 754477 CDS YP_006294165.1 387131275 12844242 2350849..2351958 1 NC_017856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; flagellar sensor histidine kinase FleS 2351958 12844242 Q7C_2344 Methylophaga frappieri flagellar sensor histidine kinase FleS YP_006294165.1 2350849 D 754477 CDS YP_006294166.1 387131276 12844243 2351955..2353316 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2353316 12844243 Q7C_2345 Methylophaga frappieri flagellar regulatory protein FleQ YP_006294166.1 2351955 D 754477 CDS YP_006294167.1 387131277 12844244 2353365..2353697 1 NC_017856.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 2353697 12844244 Q7C_2346 Methylophaga frappieri flagellar hook-basal body complex protein FliE YP_006294167.1 2353365 D 754477 CDS YP_006294168.1 387131278 12844245 2353728..2355389 1 NC_017856.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar M-ring protein FliF 2355389 12844245 Q7C_2347 Methylophaga frappieri flagellar M-ring protein FliF YP_006294168.1 2353728 D 754477 CDS YP_006294169.1 387131279 12844246 2355389..2356399 1 NC_017856.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2356399 12844246 Q7C_2348 Methylophaga frappieri flagellar motor switch protein FliG YP_006294169.1 2355389 D 754477 CDS YP_006294170.1 387131280 12844247 2356386..2357075 1 NC_017856.1 PFAM: Flagellar assembly protein FliH; flagellar assembly protein FliH 2357075 12844247 Q7C_2349 Methylophaga frappieri flagellar assembly protein FliH YP_006294170.1 2356386 D 754477 CDS YP_006294171.1 387131281 12844248 2357062..2358471 1 NC_017856.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; flagellum-specific ATP synthase FliI 2358471 12844248 Q7C_2350 Methylophaga frappieri flagellum-specific ATP synthase FliI YP_006294171.1 2357062 D 754477 CDS YP_006294172.1 387131282 12843471 2358490..2358936 1 NC_017856.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar protein FliJ 2358936 12843471 Q7C_2351 Methylophaga frappieri flagellar protein FliJ YP_006294172.1 2358490 D 754477 CDS YP_006294173.1 387131283 12843472 2358989..2359315 1 NC_017856.1 anti-anti-sigma regulatory factor 2359315 12843472 Q7C_2352 Methylophaga frappieri anti-anti-sigma regulatory factor YP_006294173.1 2358989 D 754477 CDS YP_006294174.1 387131284 12843473 2359290..2359655 1 NC_017856.1 PFAM: Response regulator receiver domain; chemotaxis regulator 2359655 12843473 Q7C_2353 Methylophaga frappieri chemotaxis regulator YP_006294174.1 2359290 D 754477 CDS YP_006294175.1 387131285 12843474 2359662..2361431 1 NC_017856.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; signal transduction histidine kinase 2361431 12843474 Q7C_2354 Methylophaga frappieri signal transduction histidine kinase YP_006294175.1 2359662 D 754477 CDS YP_006294176.1 387131286 12843475 complement(2361426..2361641) 1 NC_017856.1 hypothetical protein 2361641 12843475 Q7C_2355 Methylophaga frappieri hypothetical protein YP_006294176.1 2361426 R 754477 CDS YP_006294177.1 387131287 12843476 2361665..2361808 1 NC_017856.1 hypothetical protein 2361808 12843476 Q7C_2356 Methylophaga frappieri hypothetical protein YP_006294177.1 2361665 D 754477 CDS YP_006294178.1 387131288 12843477 2361805..2362515 1 NC_017856.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid a,c-diamide synthase 2362515 12843477 Q7C_2357 Methylophaga frappieri Cobyrinic acid a,c-diamide synthase YP_006294178.1 2361805 D 754477 CDS YP_006294179.1 387131289 12843478 2362693..2364006 1 NC_017856.1 PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK 2364006 12843478 Q7C_2358 Methylophaga frappieri flagellar hook-length control protein FliK YP_006294179.1 2362693 D 754477 CDS YP_006294180.1 387131290 12843479 2364084..2365241 1 NC_017856.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; Methyl-accepting chemotaxis protein 2365241 12843479 Q7C_2359 Methylophaga frappieri Methyl-accepting chemotaxis protein YP_006294180.1 2364084 D 754477 CDS YP_006294181.1 387131291 12843480 complement(2365290..2365979) 1 NC_017856.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; Orotidine 5'-phosphate decarboxylase 2365979 12843480 Q7C_2360 Methylophaga frappieri Orotidine 5'-phosphate decarboxylase YP_006294181.1 2365290 R 754477 CDS YP_006294182.1 387131292 12843481 2366089..2367198 1 NC_017856.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 2367198 12843481 Q7C_2361 Methylophaga frappieri tRNA-guanine transglycosylase YP_006294182.1 2366089 D 754477 CDS YP_006294183.1 387131293 12843482 2367267..2367593 1 NC_017856.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; TC 3.A.5.1.1; preprotein translocase subunit YajC 2367593 12843482 Q7C_2362 Methylophaga frappieri preprotein translocase subunit YajC YP_006294183.1 2367267 D 754477 CDS YP_006294184.1 387131294 12843483 2367645..2369501 1 NC_017856.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; TC 3.A.5.1.1; protein-export membrane protein SecD 2369501 12843483 Q7C_2363 Methylophaga frappieri protein-export membrane protein SecD YP_006294184.1 2367645 D 754477 CDS YP_006294185.1 387131295 12843484 2369512..2370462 1 NC_017856.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; TC 3.A.5.1.1; protein-export membrane protein SecF 2370462 12843484 Q7C_2364 Methylophaga frappieri protein-export membrane protein SecF YP_006294185.1 2369512 D 754477 CDS YP_006294186.1 387131296 12843485 complement(2370574..2371041) 1 NC_017856.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase 2371041 12843485 Q7C_2365 Methylophaga frappieri DNA-3-methyladenine glycosylase YP_006294186.1 2370574 R 754477 CDS YP_006294187.1 387131297 12843486 complement(2371206..2371433) 1 NC_017856.1 hypothetical protein 2371433 12843486 Q7C_2366 Methylophaga frappieri hypothetical protein YP_006294187.1 2371206 R 754477 CDS YP_006294188.1 387131298 12843487 2371606..2372559 1 NC_017856.1 PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat; PQQ-dependent catabolism-associated beta-propeller protein 2372559 12843487 Q7C_2367 Methylophaga frappieri PQQ-dependent catabolism-associated beta-propeller protein YP_006294188.1 2371606 D 754477 CDS YP_006294189.1 387131299 12843488 complement(2372586..2372732) 1 NC_017856.1 hypothetical protein 2372732 12843488 Q7C_2368 Methylophaga frappieri hypothetical protein YP_006294189.1 2372586 R 754477 CDS YP_006294190.1 387131300 12843489 2372776..2373159 1 NC_017856.1 hypothetical protein 2373159 12843489 Q7C_2369 Methylophaga frappieri hypothetical protein YP_006294190.1 2372776 D 754477 CDS YP_006294191.1 387131301 12843490 2373195..2374508 1 NC_017856.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2374508 12843490 Q7C_2370 Methylophaga frappieri UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_006294191.1 2373195 D 754477 CDS YP_006294192.1 387131302 12843491 2374505..2375113 1 NC_017856.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX 2375113 12843491 Q7C_2371 Methylophaga frappieri 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX YP_006294192.1 2374505 D 754477 CDS YP_006294193.1 387131303 12843492 2375188..2376861 1 NC_017856.1 PFAM: Formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 2376861 12843492 Q7C_2372 Methylophaga frappieri Formate--tetrahydrofolate ligase YP_006294193.1 2375188 D 754477 CDS YP_006294194.1 387131304 12843493 complement(2376858..2378525) 1 NC_017856.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; Ubiquinone biosynthesis monooxygenase UbiB 2378525 12843493 Q7C_2373 Methylophaga frappieri Ubiquinone biosynthesis monooxygenase UbiB YP_006294194.1 2376858 R 754477 CDS YP_006294195.1 387131305 12843494 complement(2378522..2379121) 1 NC_017856.1 PFAM: SCP-2 sterol transfer family; protein YigP 2379121 12843494 Q7C_2374 Methylophaga frappieri protein YigP YP_006294195.1 2378522 R 754477 CDS YP_006294196.1 387131306 12843495 complement(2379121..2379867) 1 NC_017856.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 2379867 12843495 Q7C_2375 Methylophaga frappieri Ubiquinone/menaquinone biosynthesis methyltransferase UbiE YP_006294196.1 2379121 R 754477 CDS YP_006294197.1 387131307 12843496 complement(2379867..2380232) 1 NC_017856.1 PFAM: Protein of unknown function (DUF971); hypothetical protein 2380232 12843496 Q7C_2376 Methylophaga frappieri hypothetical protein YP_006294197.1 2379867 R 754477 CDS YP_006294198.1 387131308 12843497 complement(2380239..2381561) 1 NC_017856.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; ATP-dependent hsl protease ATP-binding subunit HslU 2381561 12843497 Q7C_2377 Methylophaga frappieri ATP-dependent hsl protease ATP-binding subunit HslU YP_006294198.1 2380239 R 754477 CDS YP_006294199.1 387131309 12843498 complement(2381570..2382109) 1 NC_017856.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease HslV 2382109 12843498 Q7C_2378 Methylophaga frappieri ATP-dependent protease HslV YP_006294199.1 2381570 R 754477 CDS YP_006294200.1 387131310 12843502 2382633..2383823 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2383823 12843502 Q7C_2382 Methylophaga frappieri translation elongation factor Tu YP_006294200.1 2382633 D 754477 CDS YP_006294201.1 387131311 12843504 2384032..2384328 1 NC_017856.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; TC 3.A.5.1.1; preprotein translocase subunit SecE 2384328 12843504 Q7C_2384 Methylophaga frappieri preprotein translocase subunit SecE YP_006294201.1 2384032 D 754477 CDS YP_006294202.1 387131312 12843505 2384342..2384875 1 NC_017856.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein NusG 2384875 12843505 Q7C_2385 Methylophaga frappieri transcription antitermination protein NusG YP_006294202.1 2384342 D 754477 CDS YP_006294203.1 387131313 12843506 2384933..2385367 1 NC_017856.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 2385367 12843506 Q7C_2386 Methylophaga frappieri 50S ribosomal protein L11 YP_006294203.1 2384933 D 754477 CDS YP_006294204.1 387131314 12843507 2385367..2386059 1 NC_017856.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 2386059 12843507 Q7C_2387 Methylophaga frappieri 50S ribosomal protein L1 YP_006294204.1 2385367 D 754477 CDS YP_006294205.1 387131315 12843508 2386268..2386795 1 NC_017856.1 PFAM: Ribosomal protein L10; 50S ribosomal protein L10 2386795 12843508 Q7C_2388 Methylophaga frappieri 50S ribosomal protein L10 YP_006294205.1 2386268 D 754477 CDS YP_006294206.1 387131316 12843509 2386853..2387230 1 NC_017856.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2387230 12843509 Q7C_2389 Methylophaga frappieri 50S ribosomal protein L7/L12 YP_006294206.1 2386853 D 754477 CDS YP_006294207.1 387131317 12843510 2387401..2391477 1 NC_017856.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 2391477 12843510 Q7C_2390 Methylophaga frappieri DNA-directed RNA polymerase subunit beta YP_006294207.1 2387401 D 754477 CDS YP_006294208.1 387131318 12843511 2391530..2395726 1 NC_017856.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 2395726 12843511 Q7C_2391 Methylophaga frappieri DNA-directed RNA polymerase subunit beta' YP_006294208.1 2391530 D 754477 CDS YP_006294209.1 387131319 12843512 2395876..2396250 1 NC_017856.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 2396250 12843512 Q7C_2392 Methylophaga frappieri 30S ribosomal protein S12 YP_006294209.1 2395876 D 754477 CDS YP_006294210.1 387131320 12843513 2396295..2396765 1 NC_017856.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 2396765 12843513 Q7C_2393 Methylophaga frappieri 30S ribosomal protein S7 YP_006294210.1 2396295 D 754477 CDS YP_006294211.1 387131321 12843514 2396882..2398936 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G 2398936 12843514 Q7C_2394 Methylophaga frappieri translation elongation factor G YP_006294211.1 2396882 D 754477 CDS YP_006294212.1 387131322 12843515 2398963..2400153 1 NC_017856.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2400153 12843515 Q7C_2395 Methylophaga frappieri translation elongation factor Tu YP_006294212.1 2398963 D 754477 CDS YP_006294213.1 387131323 12843516 2400159..2400473 1 NC_017856.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 2400473 12843516 Q7C_2396 Methylophaga frappieri 30S ribosomal protein S10 YP_006294213.1 2400159 D 754477 CDS YP_006294214.1 387131324 12843517 2400487..2401119 1 NC_017856.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 2401119 12843517 Q7C_2397 Methylophaga frappieri 50S ribosomal protein L3 YP_006294214.1 2400487 D 754477 CDS YP_006294215.1 387131325 12843518 2401142..2401759 1 NC_017856.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 2401759 12843518 Q7C_2398 Methylophaga frappieri 50S ribosomal protein L4 YP_006294215.1 2401142 D 754477 CDS YP_006294216.1 387131326 12843519 2401756..2402049 1 NC_017856.1 PFAM: Ribosomal protein L23; 50S ribosomal protein L23 2402049 12843519 Q7C_2399 Methylophaga frappieri 50S ribosomal protein L23 YP_006294216.1 2401756 D 754477 CDS YP_006294217.1 387131327 12843520 2402077..2402904 1 NC_017856.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 2402904 12843520 Q7C_2400 Methylophaga frappieri 50S ribosomal protein L2 YP_006294217.1 2402077 D 754477 CDS YP_006294218.1 387131328 12843521 2402924..2403199 1 NC_017856.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 2403199 12843521 Q7C_2401 Methylophaga frappieri 30S ribosomal protein S19 YP_006294218.1 2402924 D 754477 CDS YP_006294219.1 387131329 12843522 2403209..2403541 1 NC_017856.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 2403541 12843522 Q7C_2402 Methylophaga frappieri 50S ribosomal protein L22 YP_006294219.1 2403209 D 754477 CDS YP_006294220.1 387131330 12843523 2403554..2404219 1 NC_017856.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 2404219 12843523 Q7C_2403 Methylophaga frappieri 30S ribosomal protein S3 YP_006294220.1 2403554 D 754477 CDS YP_006294221.1 387131331 12843524 2404231..2404644 1 NC_017856.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 2404644 12843524 Q7C_2404 Methylophaga frappieri 50S ribosomal protein L16 YP_006294221.1 2404231 D 754477 CDS YP_006294222.1 387131332 12843525 2404644..2404829 1 NC_017856.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 2404829 12843525 Q7C_2405 Methylophaga frappieri 50S ribosomal protein L29 YP_006294222.1 2404644 D 754477 CDS YP_006294223.1 387131333 12843526 2404839..2405099 1 NC_017856.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 2405099 12843526 Q7C_2406 Methylophaga frappieri 30S ribosomal protein S17 YP_006294223.1 2404839 D 754477 CDS YP_006294224.1 387131334 12843527 2405127..2405495 1 NC_017856.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 2405495 12843527 Q7C_2407 Methylophaga frappieri 50S ribosomal protein L14 YP_006294224.1 2405127 D 754477 CDS YP_006294225.1 387131335 12843528 2405512..2405829 1 NC_017856.1 TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 2405829 12843528 Q7C_2408 Methylophaga frappieri 50S ribosomal protein L24 YP_006294225.1 2405512 D 754477 CDS YP_006294226.1 387131336 12843529 2405850..2406389 1 NC_017856.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 2406389 12843529 Q7C_2409 Methylophaga frappieri 50S ribosomal protein L5 YP_006294226.1 2405850 D 754477 CDS YP_006294227.1 387131337 12843530 2406414..2406719 1 NC_017856.1 PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 2406719 12843530 Q7C_2410 Methylophaga frappieri 30S ribosomal protein S14 YP_006294227.1 2406414 D 754477 CDS YP_006294228.1 387131338 12843531 2406749..2407144 1 NC_017856.1 PFAM: Ribosomal protein S8; 30S ribosomal protein S8 2407144 12843531 Q7C_2411 Methylophaga frappieri 30S ribosomal protein S8 YP_006294228.1 2406749 D 754477 CDS YP_006294229.1 387131339 12843532 2407171..2407704 1 NC_017856.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 2407704 12843532 Q7C_2412 Methylophaga frappieri 50S ribosomal protein L6 YP_006294229.1 2407171 D 754477 CDS YP_006294230.1 387131340 12843533 2407783..2408070 1 NC_017856.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 2408070 12843533 Q7C_2413 Methylophaga frappieri 50S ribosomal protein L18 YP_006294230.1 2407783 D 754477 CDS YP_006294231.1 387131341 12843534 2408089..2408598 1 NC_017856.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 2408598 12843534 Q7C_2414 Methylophaga frappieri 30S ribosomal protein S5 YP_006294231.1 2408089 D 754477 CDS YP_006294232.1 387131342 12843535 2408604..2408795 1 NC_017856.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 2408795 12843535 Q7C_2415 Methylophaga frappieri 50S ribosomal protein L30 YP_006294232.1 2408604 D 754477 CDS YP_006294233.1 387131343 12843536 2408795..2409229 1 NC_017856.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 2409229 12843536 Q7C_2416 Methylophaga frappieri 50S ribosomal protein L15 YP_006294233.1 2408795 D 754477 CDS YP_006294234.1 387131344 12843537 2409237..2410589 1 NC_017856.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; TC 3.A.5.1.1; preprotein translocase subunit SecY 2410589 12843537 Q7C_2417 Methylophaga frappieri preprotein translocase subunit SecY YP_006294234.1 2409237 D 754477 CDS YP_006294235.1 387131345 12843538 2410622..2410735 1 NC_017856.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 2410735 12843538 Q7C_2418 Methylophaga frappieri 50S ribosomal protein L36 YP_006294235.1 2410622 D 754477 CDS YP_006294236.1 387131346 12843539 2410823..2411176 1 NC_017856.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 2411176 12843539 Q7C_2419 Methylophaga frappieri 30S ribosomal protein S13 YP_006294236.1 2410823 D 754477 CDS YP_006294237.1 387131347 12843540 2411188..2411577 1 NC_017856.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 2411577 12843540 Q7C_2420 Methylophaga frappieri 30S ribosomal protein S11 YP_006294237.1 2411188 D 754477 CDS YP_006294238.1 387131348 12843541 2411598..2412218 1 NC_017856.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 2412218 12843541 Q7C_2421 Methylophaga frappieri 30S ribosomal protein S4 YP_006294238.1 2411598 D 754477 CDS YP_006294239.1 387131349 12843542 2412259..2413242 1 NC_017856.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 2413242 12843542 Q7C_2422 Methylophaga frappieri DNA-directed RNA polymerase subunit alpha YP_006294239.1 2412259 D 754477 CDS YP_006294240.1 387131350 12843543 2413283..2413669 1 NC_017856.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 2413669 12843543 Q7C_2423 Methylophaga frappieri 50S ribosomal protein L17 YP_006294240.1 2413283 D 754477 CDS YP_006294241.1 387131351 12843549 complement(2419633..2420199) 1 NC_017856.1 PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; Starvation lipoprotein Slp-like protein 2420199 12843549 Q7C_2429 Methylophaga frappieri Starvation lipoprotein Slp-like protein YP_006294241.1 2419633 R 754477 CDS YP_006294242.1 387131352 12843550 2420418..2421677 1 NC_017856.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho 2421677 12843550 Q7C_2430 Methylophaga frappieri transcription termination factor Rho YP_006294242.1 2420418 D 754477 CDS YP_006294243.1 387131353 12843551 2421692..2422627 1 NC_017856.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2422627 12843551 Q7C_2431 Methylophaga frappieri tRNA delta(2)-isopentenylpyrophosphate transferase YP_006294243.1 2421692 D 754477 CDS YP_006294244.1 387131354 12843552 2422709..2422933 1 NC_017856.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq 2422933 12843552 Q7C_2432 Methylophaga frappieri RNA-binding protein Hfq YP_006294244.1 2422709 D 754477 CDS YP_006294245.1 387131355 12843554 2422947..2424095 1 NC_017856.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX 2424095 12843554 Q7C_2433 Methylophaga frappieri GTP-binding protein HflX YP_006294245.1 2422947 D 754477 CDS YP_006294246.1 387131356 12843556 2424174..2425379 1 NC_017856.1 PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 2425379 12843556 Q7C_2434 Methylophaga frappieri HflK protein YP_006294246.1 2424174 D 754477 CDS YP_006294247.1 387131357 12843558 2425382..2426254 1 NC_017856.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 2426254 12843558 Q7C_2435 Methylophaga frappieri HflC protein YP_006294247.1 2425382 D 754477 CDS YP_006294248.1 387131358 12843560 2426259..2426447 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2065); hypothetical protein 2426447 12843560 Q7C_2436 Methylophaga frappieri hypothetical protein YP_006294248.1 2426259 D 754477 CDS YP_006294249.1 387131359 12843562 2426452..2427627 1 NC_017856.1 TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 2427627 12843562 Q7C_2437 Methylophaga frappieri ATP phosphoribosyltransferase regulatory subunit YP_006294249.1 2426452 D 754477 CDS YP_006294250.1 387131360 12843563 2427632..2428927 1 NC_017856.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 2428927 12843563 Q7C_2438 Methylophaga frappieri adenylosuccinate synthetase YP_006294250.1 2427632 D 754477 CDS YP_006294251.1 387131361 12843564 complement(2428963..2429826) 1 NC_017856.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 2-hydroxy-3-oxopropionate reductase 2429826 12843564 Q7C_2439 Methylophaga frappieri 2-hydroxy-3-oxopropionate reductase YP_006294251.1 2428963 R 754477 CDS YP_006294252.1 387131362 12843565 2429946..2431187 1 NC_017856.1 PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase 2431187 12843565 Q7C_2440 Methylophaga frappieri serine hydroxymethyltransferase YP_006294252.1 2429946 D 754477 CDS YP_006294253.1 387131363 12843566 2431209..2431679 1 NC_017856.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; Ribonucleotide reductase transcriptional regulator NrdR 2431679 12843566 Q7C_2441 Methylophaga frappieri Ribonucleotide reductase transcriptional regulator NrdR YP_006294253.1 2431209 D 754477 CDS YP_006294254.1 387131364 12843567 2431743..2432840 1 NC_017856.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 2432840 12843567 Q7C_2442 Methylophaga frappieri Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_006294254.1 2431743 D 754477 CDS YP_006294255.1 387131365 12843568 2432841..2433485 1 NC_017856.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 2433485 12843568 Q7C_2443 Methylophaga frappieri riboflavin synthase subunit alpha YP_006294255.1 2432841 D 754477 CDS YP_006294256.1 387131366 12843569 2433482..2434591 1 NC_017856.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2434591 12843569 Q7C_2444 Methylophaga frappieri 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006294256.1 2433482 D 754477 CDS YP_006294257.1 387131367 12843570 2434594..2435745 1 NC_017856.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; Lipid-A-disaccharide synthase 2435745 12843570 Q7C_2445 Methylophaga frappieri Lipid-A-disaccharide synthase YP_006294257.1 2434594 D 754477 CDS YP_006294258.1 387131368 12843571 2435745..2436308 1 NC_017856.1 PFAM: Ribonuclease HII; Ribonuclease HII 2436308 12843571 Q7C_2446 Methylophaga frappieri Ribonuclease HII YP_006294258.1 2435745 D 754477 CDS YP_006294259.1 387131369 12843572 2436369..2437730 1 NC_017856.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; Poly(A) polymerase 2437730 12843572 Q7C_2447 Methylophaga frappieri Poly(A) polymerase YP_006294259.1 2436369 D 754477 CDS YP_006294260.1 387131370 12843573 2437730..2438218 1 NC_017856.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2438218 12843573 Q7C_2448 Methylophaga frappieri 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_006294260.1 2437730 D 754477 CDS YP_006294261.1 387131371 12843574 2438215..2438874 1 NC_017856.1 PFAM: Deoxynucleoside kinase; Deoxyadenosine kinase / Deoxyguanosine kinase 2438874 12843574 Q7C_2449 Methylophaga frappieri Deoxyadenosine kinase / Deoxyguanosine kinase YP_006294261.1 2438215 D 754477 CDS YP_006294262.1 387131372 12843575 2438871..2439668 1 NC_017856.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2439668 12843575 Q7C_2450 Methylophaga frappieri 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006294262.1 2438871 D 754477 CDS YP_006294263.1 387131373 12843576 2439668..2440528 1 NC_017856.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; Pantoate--beta-alanine ligase 2440528 12843576 Q7C_2451 Methylophaga frappieri Pantoate--beta-alanine ligase YP_006294263.1 2439668 D 754477 CDS YP_006294264.1 387131374 12843577 2440575..2440955 1 NC_017856.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase 2440955 12843577 Q7C_2452 Methylophaga frappieri aspartate 1-decarboxylase YP_006294264.1 2440575 D 754477 CDS YP_006294265.1 387131375 12843578 2441055..2442761 1 NC_017856.1 PFAM: Acyltransferase; hemolysin 2442761 12843578 Q7C_2453 Methylophaga frappieri hemolysin YP_006294265.1 2441055 D 754477 CDS YP_006294266.1 387131376 12843579 complement(2442758..2443132) 1 NC_017856.1 PFAM: SEC-C motif; hypothetical protein 2443132 12843579 Q7C_2454 Methylophaga frappieri hypothetical protein YP_006294266.1 2442758 R 754477 CDS YP_006294267.1 387131377 12843580 complement(2443212..2444009) 1 NC_017856.1 protein yeeZ precursor 2444009 12843580 Q7C_2455 Methylophaga frappieri protein yeeZ precursor YP_006294267.1 2443212 R 754477 CDS YP_006294268.1 387131378 12843581 2444110..2444640 1 NC_017856.1 hypothetical protein 2444640 12843581 Q7C_2456 Methylophaga frappieri hypothetical protein YP_006294268.1 2444110 D 754477 CDS YP_006294269.1 387131379 12843582 2444716..2445753 1 NC_017856.1 PFAM: CBS domain; Domain of unknown function DUF21; Magnesium and cobalt efflux protein CorC 2445753 12843582 Q7C_2457 Methylophaga frappieri Magnesium and cobalt efflux protein CorC YP_006294269.1 2444716 D 754477 CDS YP_006294270.1 387131380 12843583 2445819..2446328 1 NC_017856.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 2446328 12843583 Q7C_2458 Methylophaga frappieri clan AA aspartic protease YP_006294270.1 2445819 D 754477 CDS YP_006294271.1 387131381 12843584 complement(2446325..2447011) 1 NC_017856.1 PFAM: Transglycosylase SLT domain; lytic transglycosylase 2447011 12843584 Q7C_2459 Methylophaga frappieri lytic transglycosylase YP_006294271.1 2446325 R 754477 CDS YP_006294272.1 387131382 12843585 complement(2447015..2447476) 1 NC_017856.1 PFAM: Copper resistance protein D; hypothetical protein 2447476 12843585 Q7C_2460 Methylophaga frappieri hypothetical protein YP_006294272.1 2447015 R 754477 CDS YP_006294273.1 387131383 12843586 complement(2447489..2449018) 1 NC_017856.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fumarate hydratase class I, aerobic 2449018 12843586 Q7C_2461 Methylophaga frappieri Fumarate hydratase class I, aerobic YP_006294273.1 2447489 R 754477 CDS YP_006294274.1 387131384 12843587 complement(2449024..2450733) 1 NC_017856.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase , bacterial type 2450733 12843587 Q7C_2462 Methylophaga frappieri prolyl-tRNA synthetase , bacterial type YP_006294274.1 2449024 R 754477 CDS YP_006294275.1 387131385 12843588 complement(2450797..2451132) 1 NC_017856.1 PFAM: Macrophage migration inhibitory factor (MIF); ATLS1-like light-inducible protein 2451132 12843588 Q7C_2463 Methylophaga frappieri ATLS1-like light-inducible protein YP_006294275.1 2450797 R 754477 CDS YP_006294276.1 387131386 12843589 complement(2451145..2451600) 1 NC_017856.1 Periplasmic protein TonB, links inner and outer membranes 2451600 12843589 Q7C_2464 Methylophaga frappieri Periplasmic protein TonB, links inner and outer membranes YP_006294276.1 2451145 R 754477 CDS YP_006294277.1 387131387 12843590 2451580..2452470 1 NC_017856.1 PFAM: RNA pseudouridylate synthase; Ribosomal large subunit pseudouridine synthase D 2452470 12843590 Q7C_2465 Methylophaga frappieri Ribosomal large subunit pseudouridine synthase D YP_006294277.1 2451580 D 754477 CDS YP_006294278.1 387131388 12843591 complement(2452478..2453746) 1 NC_017856.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; DNA-damage-inducible protein F 2453746 12843591 Q7C_2466 Methylophaga frappieri DNA-damage-inducible protein F YP_006294278.1 2452478 R 754477 CDS YP_006294279.1 387131389 12843592 2453746..2453862 1 NC_017856.1 hypothetical protein 2453862 12843592 Q7C_2467 Methylophaga frappieri hypothetical protein YP_006294279.1 2453746 D 754477 CDS YP_006294280.1 387131390 12843593 complement(2453877..2455895) 1 NC_017856.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; pyrophosphate-energized proton pump 2455895 12843593 Q7C_2468 Methylophaga frappieri pyrophosphate-energized proton pump YP_006294280.1 2453877 R 754477 CDS YP_006294281.1 387131391 12843594 2456389..2456928 1 NC_017856.1 PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 2456928 12843594 Q7C_2469 Methylophaga frappieri inorganic pyrophosphatase YP_006294281.1 2456389 D 754477 CDS YP_006294282.1 387131392 12843595 2456996..2457841 1 NC_017856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase 2457841 12843595 Q7C_2470 Methylophaga frappieri phosphoserine phosphatase YP_006294282.1 2456996 D 754477 CDS YP_006294283.1 387131393 12843596 2457901..2458212 1 NC_017856.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; glutaredoxin-related protein 2458212 12843596 Q7C_2471 Methylophaga frappieri glutaredoxin-related protein YP_006294283.1 2457901 D 754477 CDS YP_006294284.1 387131394 12843597 2458221..2458547 1 NC_017856.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2458547 12843597 Q7C_2472 Methylophaga frappieri ATP-dependent Clp protease adaptor protein ClpS YP_006294284.1 2458221 D 754477 CDS YP_006294285.1 387131395 12843598 2458581..2460836 1 NC_017856.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA 2460836 12843598 Q7C_2473 Methylophaga frappieri ATP-dependent Clp protease ATP-binding subunit ClpA YP_006294285.1 2458581 D 754477 CDS YP_006294286.1 387131396 12843599 complement(2460942..2461067) 1 NC_017856.1 hypothetical protein 2461067 12843599 Q7C_2474 Methylophaga frappieri hypothetical protein YP_006294286.1 2460942 R 754477 CDS YP_006294287.1 387131397 12843600 complement(2461167..2461769) 1 NC_017856.1 PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; Cob(I)alamin adenosyltransferase 2461769 12843600 Q7C_2475 Methylophaga frappieri Cob(I)alamin adenosyltransferase YP_006294287.1 2461167 R 754477 CDS YP_006294288.1 387131398 12843601 complement(2461795..2463735) 1 NC_017856.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor; TonB-dependent receptor 2463735 12843601 Q7C_2476 Methylophaga frappieri TonB-dependent receptor YP_006294288.1 2461795 R 754477 CDS YP_006294289.1 387131399 12843602 2464172..2465359 1 NC_017856.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; O-succinylhomoserine sulfhydrylase 2465359 12843602 Q7C_2477 Methylophaga frappieri O-succinylhomoserine sulfhydrylase YP_006294289.1 2464172 D 754477 CDS YP_006294290.1 387131400 12843603 2465459..2467183 1 NC_017856.1 PFAM: von Willebrand factor type A domain; TIGRFAM: TIGR03503 family protein; von Willebrand factor type A-like protein 2467183 12843603 Q7C_2478 Methylophaga frappieri von Willebrand factor type A-like protein YP_006294290.1 2465459 D 754477 CDS YP_006294291.1 387131401 12843604 2467184..2469685 1 NC_017856.1 hypothetical protein 2469685 12843604 Q7C_2479 Methylophaga frappieri hypothetical protein YP_006294291.1 2467184 D 754477 CDS YP_006294292.1 387131402 12843605 2469758..2471092 1 NC_017856.1 PFAM: FAD dependent oxidoreductase; Malate:quinone oxidoreductase 2471092 12843605 Q7C_2480 Methylophaga frappieri Malate:quinone oxidoreductase YP_006294292.1 2469758 D 754477 CDS YP_006294293.1 387131403 12843606 2471092..2471559 1 NC_017856.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB; transcription elongation factor GreB 2471559 12843606 Q7C_2481 Methylophaga frappieri transcription elongation factor GreB YP_006294293.1 2471092 D 754477 CDS YP_006294294.1 387131404 12843607 complement(2471610..2471852) 1 NC_017856.1 hypothetical protein 2471852 12843607 Q7C_2482 Methylophaga frappieri hypothetical protein YP_006294294.1 2471610 R 754477 CDS YP_006294295.1 387131405 12843608 complement(2471911..2472417) 1 NC_017856.1 PFAM: Nickel-containing superoxide dismutase; TIGRFAM: superoxide dismutase, Ni; nickel-containing superoxide dismutase 2472417 12843608 Q7C_2483 Methylophaga frappieri nickel-containing superoxide dismutase YP_006294295.1 2471911 R 754477 CDS YP_006294296.1 387131406 12843609 complement(2472439..2472642) 1 NC_017856.1 hypothetical protein 2472642 12843609 Q7C_2484 Methylophaga frappieri hypothetical protein YP_006294296.1 2472439 R 754477 CDS YP_006294297.1 387131407 12843610 complement(2472639..2473157) 1 NC_017856.1 hypothetical protein 2473157 12843610 Q7C_2485 Methylophaga frappieri hypothetical protein YP_006294297.1 2472639 R 754477 CDS YP_006294298.1 387131408 12843611 2473357..2475447 1 NC_017856.1 PFAM: TonB-dependent Receptor Plug Domain; outer membrane receptor protein 2475447 12843611 Q7C_2486 Methylophaga frappieri outer membrane receptor protein YP_006294298.1 2473357 D 754477 CDS YP_006294299.1 387131409 12843612 complement(2475528..2477750) 1 NC_017856.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; Catalase / Peroxidase 2477750 12843612 Q7C_2487 Methylophaga frappieri Catalase / Peroxidase YP_006294299.1 2475528 R 754477 CDS YP_006294300.1 387131410 12843613 complement(2477847..2478758) 1 NC_017856.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; Hydrogen peroxide-inducible genes activator 2478758 12843613 Q7C_2488 Methylophaga frappieri Hydrogen peroxide-inducible genes activator YP_006294300.1 2477847 R 754477 CDS YP_006294301.1 387131411 12843614 2478923..2479303 1 NC_017856.1 PFAM: MerC mercury resistance protein; MerC mercury resistance protein 2479303 12843614 Q7C_2489 Methylophaga frappieri MerC mercury resistance protein YP_006294301.1 2478923 D 754477 CDS YP_006294302.1 387131412 12843615 2479434..2480090 1 NC_017856.1 PFAM: Protein of unknown function (DUF1826); hypothetical protein 2480090 12843615 Q7C_2490 Methylophaga frappieri hypothetical protein YP_006294302.1 2479434 D 754477 CDS YP_006294303.1 387131413 12843616 2480130..2480675 1 NC_017856.1 PFAM: Protein of unknown function (DUF2796); zinc-binding protein 2480675 12843616 Q7C_2491 Methylophaga frappieri zinc-binding protein YP_006294303.1 2480130 D 754477 CDS YP_006294304.1 387131414 12843617 2480682..2481146 1 NC_017856.1 PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR 2481146 12843617 Q7C_2492 Methylophaga frappieri Zinc uptake regulation protein ZUR YP_006294304.1 2480682 D 754477 CDS YP_006294305.1 387131415 12843618 complement(2481149..2481712) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3299); hypothetical protein 2481712 12843618 Q7C_2493 Methylophaga frappieri hypothetical protein YP_006294305.1 2481149 R 754477 CDS YP_006294306.1 387131416 12843619 complement(2481721..2481885) 1 NC_017856.1 hypothetical protein 2481885 12843619 Q7C_2494 Methylophaga frappieri hypothetical protein YP_006294306.1 2481721 R 754477 CDS YP_006294307.1 387131417 12843620 2481913..2482446 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 2482446 12843620 Q7C_2495 Methylophaga frappieri ABC transporter ATP-binding protein YP_006294307.1 2481913 D 754477 CDS YP_006294308.1 387131418 12843621 2482443..2483657 1 NC_017856.1 PFAM: Predicted permease; antimicrobial peptide ABC transporter permease 2483657 12843621 Q7C_2496 Methylophaga frappieri antimicrobial peptide ABC transporter permease YP_006294308.1 2482443 D 754477 CDS YP_006294309.1 387131419 12843622 complement(2483677..2484783) 1 NC_017856.1 PFAM: Glucose / Sorbosone dehydrogenase; PQQ-dependent oxidoreductase, gdhB family 2484783 12843622 Q7C_2497 Methylophaga frappieri PQQ-dependent oxidoreductase, gdhB family YP_006294309.1 2483677 R 754477 CDS YP_006294310.1 387131420 12843623 complement(2484798..2486438) 1 NC_017856.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 2486438 12843623 Q7C_2498 Methylophaga frappieri hypothetical protein YP_006294310.1 2484798 R 754477 CDS YP_006294311.1 387131421 12843624 complement(2486526..2489387) 1 NC_017856.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2489387 12843624 Q7C_2499 Methylophaga frappieri valyl-tRNA synthetase YP_006294311.1 2486526 R 754477 CDS YP_006294312.1 387131422 12843625 complement(2489427..2489855) 1 NC_017856.1 PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi 2489855 12843625 Q7C_2500 Methylophaga frappieri DNA polymerase III subunit chi YP_006294312.1 2489427 R 754477 CDS YP_006294313.1 387131423 12843626 complement(2489859..2491346) 1 NC_017856.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; cytosol aminopeptidase 2491346 12843626 Q7C_2501 Methylophaga frappieri cytosol aminopeptidase YP_006294313.1 2489859 R 754477 CDS YP_006294314.1 387131424 12843627 2491486..2492562 1 NC_017856.1 PFAM: Predicted permease YjgP/YjgQ family; permease 2492562 12843627 Q7C_2502 Methylophaga frappieri permease YP_006294314.1 2491486 D 754477 CDS YP_006294315.1 387131425 12843628 2492564..2493625 1 NC_017856.1 PFAM: Predicted permease YjgP/YjgQ family; Permease 2493625 12843628 Q7C_2503 Methylophaga frappieri Permease YP_006294315.1 2492564 D 754477 CDS YP_006294316.1 387131426 12843631 2493963..2494097 1 NC_017856.1 hypothetical protein 2494097 12843631 Q7C_2506 Methylophaga frappieri hypothetical protein YP_006294316.1 2493963 D 754477 CDS YP_006294317.1 387131427 12843632 2494175..2496439 1 NC_017856.1 PFAM: Organic solvent tolerance protein; OstA-like protein; Outer membrane protein Imp 2496439 12843632 Q7C_2507 Methylophaga frappieri Outer membrane protein Imp YP_006294317.1 2494175 D 754477 CDS YP_006294318.1 387131428 12843633 2496547..2497812 1 NC_017856.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; periplasmic chaperone for outer membrane proteins SurA 2497812 12843633 Q7C_2508 Methylophaga frappieri periplasmic chaperone for outer membrane proteins SurA YP_006294318.1 2496547 D 754477 CDS YP_006294319.1 387131429 12843634 2497812..2498807 1 NC_017856.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 2498807 12843634 Q7C_2509 Methylophaga frappieri 4-hydroxythreonine-4-phosphate dehydrogenase YP_006294319.1 2497812 D 754477 CDS YP_006294320.1 387131430 12843635 2498804..2499616 1 NC_017856.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; Dimethyladenosine transferase 2499616 12843635 Q7C_2510 Methylophaga frappieri Dimethyladenosine transferase YP_006294320.1 2498804 D 754477 CDS YP_006294321.1 387131431 12843636 2499809..2500081 1 NC_017856.1 PFAM: Bacterial DNA-binding protein; DNA-binding protein HU-beta 2500081 12843636 Q7C_2511 Methylophaga frappieri DNA-binding protein HU-beta YP_006294321.1 2499809 D 754477 CDS YP_006294322.1 387131432 12843641 2500335..2502233 1 NC_017856.1 PFAM: PPIC-type PPIASE domain; Peptidyl-prolyl cis-trans isomerase ppiD 2502233 12843641 Q7C_2514 Methylophaga frappieri Peptidyl-prolyl cis-trans isomerase ppiD YP_006294322.1 2500335 D 754477 CDS YP_006294323.1 387131433 12843642 complement(2502266..2503483) 1 NC_017856.1 PFAM: Sodium:dicarboxylate symporter family; proton/glutamate symport protein / Sodium/glutamate symport protein 2503483 12843642 Q7C_2515 Methylophaga frappieri proton/glutamate symport protein / Sodium/glutamate symport protein YP_006294323.1 2502266 R 754477 CDS YP_006294324.1 387131434 12843643 complement(2503564..2504352) 1 NC_017856.1 PFAM: short chain dehydrogenase; enoyl-ACP reductase 2504352 12843643 Q7C_2516 Methylophaga frappieri enoyl-ACP reductase YP_006294324.1 2503564 R 754477 CDS YP_006294325.1 387131435 12843644 2504474..2506618 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; Dipeptide-binding ABC transporter, periplasmic substrate-binding component 2506618 12843644 Q7C_2517 Methylophaga frappieri Dipeptide-binding ABC transporter, periplasmic substrate-binding component YP_006294325.1 2504474 D 754477 CDS YP_006294326.1 387131436 12843645 2506700..2507473 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 2507473 12843645 Q7C_2518 Methylophaga frappieri flagellar motor rotation protein MotA YP_006294326.1 2506700 D 754477 CDS YP_006294327.1 387131437 12843646 2507488..2508381 1 NC_017856.1 PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB 2508381 12843646 Q7C_2519 Methylophaga frappieri flagellar motor rotation protein MotB YP_006294327.1 2507488 D 754477 CDS YP_006294328.1 387131438 12843647 2508415..2509062 1 NC_017856.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 2509062 12843647 Q7C_2520 Methylophaga frappieri 3-isopropylmalate dehydratase small subunit YP_006294328.1 2508415 D 754477 CDS YP_006294329.1 387131439 12843649 2509078..2510148 1 NC_017856.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2510148 12843649 Q7C_2521 Methylophaga frappieri 3-isopropylmalate dehydrogenase YP_006294329.1 2509078 D 754477 CDS YP_006294330.1 387131440 12843651 2510172..2511194 1 NC_017856.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Aspartate-semialdehyde dehydrogenase 2511194 12843651 Q7C_2522 Methylophaga frappieri Aspartate-semialdehyde dehydrogenase YP_006294330.1 2510172 D 754477 CDS YP_006294331.1 387131441 12843652 2511263..2514040 1 NC_017856.1 TIGRFAM: FimV C-terminal domain; FimV N-terminal domain; LysM domain-containing protein 2514040 12843652 Q7C_2523 Methylophaga frappieri LysM domain-containing protein YP_006294331.1 2511263 D 754477 CDS YP_006294332.1 387131442 12843653 2514130..2514834 1 NC_017856.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A 2514834 12843653 Q7C_2524 Methylophaga frappieri tRNA pseudouridine synthase A YP_006294332.1 2514130 D 754477 CDS YP_006294333.1 387131443 12843654 2514871..2515485 1 NC_017856.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 2515485 12843654 Q7C_2525 Methylophaga frappieri phosphoribosylanthranilate isomerase YP_006294333.1 2514871 D 754477 CDS YP_006294334.1 387131444 12843655 2515478..2516698 1 NC_017856.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 2516698 12843655 Q7C_2526 Methylophaga frappieri tryptophan synthase subunit beta YP_006294334.1 2515478 D 754477 CDS YP_006294335.1 387131445 12843656 2516707..2517528 1 NC_017856.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 2517528 12843656 Q7C_2527 Methylophaga frappieri tryptophan synthase subunit alpha YP_006294335.1 2516707 D 754477 CDS YP_006294336.1 387131446 12843657 2517681..2518145 1 NC_017856.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxyl transferase subunit beta 2518145 12843657 Q7C_2528 Methylophaga frappieri acetyl-coenzyme A carboxyl transferase subunit beta YP_006294336.1 2517681 D 754477 CDS YP_006294337.1 387131447 12843658 2518145..2518405 1 NC_017856.1 acetyl-coenzyme A carboxyl transferase subunit beta 2518405 12843658 Q7C_2529 Methylophaga frappieri acetyl-coenzyme A carboxyl transferase subunit beta YP_006294337.1 2518145 D 754477 CDS YP_006294338.1 387131448 12843659 2518419..2519708 1 NC_017856.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; Dihydrofolate synthase / Folylpolyglutamate synthase 2519708 12843659 Q7C_2530 Methylophaga frappieri Dihydrofolate synthase / Folylpolyglutamate synthase YP_006294338.1 2518419 D 754477 CDS YP_006294339.1 387131449 12843660 complement(2519700..2521532) 1 NC_017856.1 PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 2521532 12843660 Q7C_2531 Methylophaga frappieri long-chain-fatty-acid--CoA ligase YP_006294339.1 2519700 R 754477 CDS YP_006294340.1 387131450 12843661 complement(2521517..2522803) 1 NC_017856.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); long-chain fatty acid transport protein 2522803 12843661 Q7C_2532 Methylophaga frappieri long-chain fatty acid transport protein YP_006294340.1 2521517 R 754477 CDS YP_006294341.1 387131451 12843662 complement(2522873..2523562) 1 NC_017856.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine46-N7-)-methyltransferase 2523562 12843662 Q7C_2533 Methylophaga frappieri tRNA (guanine46-N7-)-methyltransferase YP_006294341.1 2522873 R 754477 CDS YP_006294342.1 387131452 12843663 2523881..2525704 1 NC_017856.1 PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase; Phosphogluconate dehydratase 2525704 12843663 Q7C_2534 Methylophaga frappieri Phosphogluconate dehydratase YP_006294342.1 2523881 D 754477 CDS YP_006294343.1 387131453 12843664 2525720..2526352 1 NC_017856.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 4-hydroxy-2-ketovalerate aldolase 2526352 12843664 Q7C_2535 Methylophaga frappieri 4-hydroxy-2-ketovalerate aldolase YP_006294343.1 2525720 D 754477 CDS YP_006294344.1 387131454 12843665 complement(2526419..2526622) 1 NC_017856.1 PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein 2526622 12843665 Q7C_2536 Methylophaga frappieri cold-shock protein YP_006294344.1 2526419 R 754477 CDS YP_006294345.1 387131455 12843666 complement(2526855..2527214) 1 NC_017856.1 hypothetical protein 2527214 12843666 Q7C_2537 Methylophaga frappieri hypothetical protein YP_006294345.1 2526855 R 754477 CDS YP_006294346.1 387131456 12843667 complement(2527249..2527392) 1 NC_017856.1 hypothetical protein 2527392 12843667 Q7C_2538 Methylophaga frappieri hypothetical protein YP_006294346.1 2527249 R 754477 CDS YP_006294347.1 387131457 12843668 complement(2527347..2527622) 1 NC_017856.1 PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily 2527622 12843668 Q7C_2539 Methylophaga frappieri enzyme of the cupin superfamily YP_006294347.1 2527347 R 754477 CDS YP_006294348.1 387131458 12843669 complement(2527745..2529430) 1 NC_017856.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; NAD-dependent malic enzyme 2529430 12843669 Q7C_2540 Methylophaga frappieri NAD-dependent malic enzyme YP_006294348.1 2527745 R 754477 CDS YP_006294349.1 387131459 12843670 2529546..2529887 1 NC_017856.1 hypothetical protein 2529887 12843670 Q7C_2541 Methylophaga frappieri hypothetical protein YP_006294349.1 2529546 D 754477 CDS YP_006294350.1 387131460 12843671 2530076..2531950 1 NC_017856.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter substrate-binding protein OppA 2531950 12843671 Q7C_2542 Methylophaga frappieri oligopeptide ABC transporter substrate-binding protein OppA YP_006294350.1 2530076 D 754477 CDS YP_006294351.1 387131461 12843672 2531956..2533338 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.1; Oligopeptide transport system permease OppB 2533338 12843672 Q7C_2543 Methylophaga frappieri Oligopeptide transport system permease OppB YP_006294351.1 2531956 D 754477 CDS YP_006294352.1 387131462 12843673 2533331..2534515 1 NC_017856.1 PFAM: Binding-protein-dependent transport system inner membrane component; TC 3.A.1.5.2; dipeptide transport system permease DppC 2534515 12843673 Q7C_2544 Methylophaga frappieri dipeptide transport system permease DppC YP_006294352.1 2533331 D 754477 CDS YP_006294353.1 387131463 12843674 2534512..2536167 1 NC_017856.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TC 3.A.1.5.1; Oligopeptide transport ATP-binding protein OppD 2536167 12843674 Q7C_2545 Methylophaga frappieri Oligopeptide transport ATP-binding protein OppD YP_006294353.1 2534512 D 754477 CDS YP_006294354.1 387131464 12843675 complement(2536160..2536789) 1 NC_017856.1 PFAM: GDSL-like Lipase/Acylhydrolase; Arylesterase precursor 2536789 12843675 Q7C_2546 Methylophaga frappieri Arylesterase precursor YP_006294354.1 2536160 R 754477 CDS YP_006294355.1 387131465 12843676 2536823..2537524 1 NC_017856.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 2537524 12843676 Q7C_2547 Methylophaga frappieri ABC transporter ATP-binding protein YP_006294355.1 2536823 D 754477 CDS YP_006294356.1 387131466 12843677 2537521..2540007 1 NC_017856.1 PFAM: Predicted permease; hypothetical protein 2540007 12843677 Q7C_2548 Methylophaga frappieri hypothetical protein YP_006294356.1 2537521 D 754477 CDS YP_006294357.1 387131467 12843678 2540066..2540296 1 NC_017856.1 PFAM: Protein of unknown function (DUF2789); hypothetical protein 2540296 12843678 Q7C_2549 Methylophaga frappieri hypothetical protein YP_006294357.1 2540066 D 754477 CDS YP_006294358.1 387131468 12843679 2540341..2541048 1 NC_017856.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2541048 12843679 Q7C_2550 Methylophaga frappieri monofunctional biosynthetic peptidoglycan transglycosylase YP_006294358.1 2540341 D 754477 CDS YP_006294359.1 387131469 12843680 2541161..2541607 1 NC_017856.1 PFAM: Rickettsia 17 kDa surface antigen; 17 kDa surface antigen 2541607 12843680 Q7C_2551 Methylophaga frappieri 17 kDa surface antigen YP_006294359.1 2541161 D 754477 CDS YP_006294360.1 387131470 12843681 2541807..2541941 1 NC_017856.1 hypothetical protein 2541941 12843681 Q7C_2552 Methylophaga frappieri hypothetical protein YP_006294360.1 2541807 D 754477 CDS YP_006294361.1 387131471 12843682 2542584..2542901 1 NC_017856.1 hypothetical protein 2542901 12843682 Q7C_2553 Methylophaga frappieri hypothetical protein YP_006294361.1 2542584 D 754477 CDS YP_006294362.1 387131472 12843683 2542901..2544607 1 NC_017856.1 iron-regulated membrane protein 2544607 12843683 Q7C_2554 Methylophaga frappieri iron-regulated membrane protein YP_006294362.1 2542901 D 754477 CDS YP_006294363.1 387131473 12843684 2544597..2544926 1 NC_017856.1 PFAM: Protein of unknown function (DUF3325); hypothetical protein 2544926 12843684 Q7C_2555 Methylophaga frappieri hypothetical protein YP_006294363.1 2544597 D 754477 CDS YP_006294364.1 387131474 12843685 2544881..2545030 1 NC_017856.1 hypothetical protein 2545030 12843685 Q7C_2556 Methylophaga frappieri hypothetical protein YP_006294364.1 2544881 D 754477 CDS YP_006294365.1 387131475 12843686 2545226..2549149 1 NC_017856.1 PFAM: GAF domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 2549149 12843686 Q7C_2557 Methylophaga frappieri sensor histidine kinase with a response regulator receiver domain YP_006294365.1 2545226 D 754477 CDS YP_006294366.1 387131476 12843687 2549321..2550970 1 NC_017856.1 PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2550970 12843687 Q7C_2558 Methylophaga frappieri diguanylate cyclase YP_006294366.1 2549321 D 754477 CDS YP_006294367.1 387131477 12843688 complement(2551005..2552408) 1 NC_017856.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alanine carboxypeptidase 2552408 12843688 Q7C_2559 Methylophaga frappieri D-alanyl-D-alanine carboxypeptidase YP_006294367.1 2551005 R 754477 CDS YP_006294368.1 387131478 12843689 2552873..2553088 1 NC_017856.1 hypothetical protein 2553088 12843689 Q7C_2560 Methylophaga frappieri hypothetical protein YP_006294368.1 2552873 D 754477 CDS YP_006294369.1 387131479 12843690 2553163..2553486 1 NC_017856.1 hypothetical protein 2553486 12843690 Q7C_2561 Methylophaga frappieri hypothetical protein YP_006294369.1 2553163 D 754477 CDS YP_006294370.1 387131480 12843691 2553555..2554841 1 NC_017856.1 PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein, CzcC family 2554841 12843691 Q7C_2562 Methylophaga frappieri Heavy metal RND efflux outer membrane protein, CzcC family YP_006294370.1 2553555 D 754477 CDS YP_006294371.1 387131481 12843692 2554846..2556063 1 NC_017856.1 Co/Zn/Cd efflux system membrane fusion protein 2556063 12843692 Q7C_2563 Methylophaga frappieri Co/Zn/Cd efflux system membrane fusion protein YP_006294371.1 2554846 D 754477 CDS YP_006294372.1 387131482 12843693 2556073..2559210 1 NC_017856.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA 2559210 12843693 Q7C_2564 Methylophaga frappieri Cobalt-zinc-cadmium resistance protein CzcA, Cation efflux system protein CusA YP_006294372.1 2556073 D 754477 CDS YP_006294373.1 387131483 12843694 2559226..2559795 1 NC_017856.1 PFAM: Domain of unknown function DUF; Integral membrane protein 2559795 12843694 Q7C_2565 Methylophaga frappieri Integral membrane protein YP_006294373.1 2559226 D 754477 CDS YP_006294374.1 387131484 12843695 2559876..2560427 1 NC_017856.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; Formaldehyde activating enzyme 2560427 12843695 Q7C_2566 Methylophaga frappieri Formaldehyde activating enzyme YP_006294374.1 2559876 D 754477 CDS YP_006294375.1 387131485 12843696 2560541..2561455 1 NC_017856.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 2561455 12843696 Q7C_2567 Methylophaga frappieri Potassium efflux system KefA protein / Small-conductance mechanosensitive channel YP_006294375.1 2560541 D 754477 CDS YP_006294376.1 387131486 12843697 complement(2561462..2562841) 1 NC_017856.1 PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 2562841 12843697 Q7C_2568 Methylophaga frappieri Trk system potassium uptake protein TrkA YP_006294376.1 2561462 R 754477 CDS YP_006294377.1 387131487 12843698 complement(2562838..2563008) 1 NC_017856.1 hypothetical protein 2563008 12843698 Q7C_2569 Methylophaga frappieri hypothetical protein YP_006294377.1 2562838 R 754477 CDS YP_006294378.1 387131488 12843699 2563061..2563546 1 NC_017856.1 hypothetical protein 2563546 12843699 Q7C_2570 Methylophaga frappieri hypothetical protein YP_006294378.1 2563061 D 754477 CDS YP_006294379.1 387131489 12843700 complement(2563567..2564295) 1 NC_017856.1 PFAM: Dienelactone hydrolase family; Dienelactone hydrolase and related enzyme 2564295 12843700 Q7C_2571 Methylophaga frappieri Dienelactone hydrolase and related enzyme YP_006294379.1 2563567 R 754477 CDS YP_006294380.1 387131490 12843701 complement(2564374..2564589) 1 NC_017856.1 hypothetical protein 2564589 12843701 Q7C_2572 Methylophaga frappieri hypothetical protein YP_006294380.1 2564374 R 754477 CDS YP_006294381.1 387131491 12843702 2564760..2565377 1 NC_017856.1 hypothetical protein 2565377 12843702 Q7C_2573 Methylophaga frappieri hypothetical protein YP_006294381.1 2564760 D 754477 CDS YP_006294382.1 387131492 12843703 2565364..2566608 1 NC_017856.1 hypothetical protein 2566608 12843703 Q7C_2574 Methylophaga frappieri hypothetical protein YP_006294382.1 2565364 D 754477 CDS YP_006294383.1 387131493 12843704 2566621..2568039 1 NC_017856.1 hypothetical protein 2568039 12843704 Q7C_2575 Methylophaga frappieri hypothetical protein YP_006294383.1 2566621 D 754477 CDS YP_006294384.1 387131494 12843705 2568089..2570032 1 NC_017856.1 PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain; hypothetical protein 2570032 12843705 Q7C_2576 Methylophaga frappieri hypothetical protein YP_006294384.1 2568089 D 754477 CDS YP_006294385.1 387131495 12843706 2570032..2570172 1 NC_017856.1 hypothetical protein 2570172 12843706 Q7C_2577 Methylophaga frappieri hypothetical protein YP_006294385.1 2570032 D 754477 CDS YP_006294386.1 387131496 12843707 2570173..2570934 1 NC_017856.1 PFAM: MotA/TolQ/ExbB proton channel family; biopolymer transport protein, ExbB family 2570934 12843707 Q7C_2578 Methylophaga frappieri biopolymer transport protein, ExbB family YP_006294386.1 2570173 D 754477 CDS YP_006294387.1 387131497 12843708 2570941..2571999 1 NC_017856.1 Secreted protein, containing von Willebrand factor (vWF) type A domain 2571999 12843708 Q7C_2579 Methylophaga frappieri Secreted protein, containing von Willebrand factor (vWF) type A domain YP_006294387.1 2570941 D 754477 CDS YP_006294388.1 387131498 12843709 2571996..2572949 1 NC_017856.1 Secreted protein, containing von Willebrand factor (vWF) type A domain 2572949 12843709 Q7C_2580 Methylophaga frappieri Secreted protein, containing von Willebrand factor (vWF) type A domain YP_006294388.1 2571996 D 754477 CDS YP_006294389.1 387131499 12843710 2573235..2574047 1 NC_017856.1 hypothetical protein 2574047 12843710 Q7C_2581 Methylophaga frappieri hypothetical protein YP_006294389.1 2573235 D 754477 CDS YP_006294390.1 387131500 12843711 2574277..2576484 1 NC_017856.1 PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family; bacteriocin/lantibiotic exporters peptidase domain-containing protein 2576484 12843711 Q7C_2582 Methylophaga frappieri bacteriocin/lantibiotic exporters peptidase domain-containing protein YP_006294390.1 2574277 D 754477 CDS YP_006294391.1 387131501 12843712 2576481..2577881 1 NC_017856.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein 2577881 12843712 Q7C_2583 Methylophaga frappieri HlyD family secretion protein YP_006294391.1 2576481 D 754477 CDS YP_006294392.1 387131502 12843713 2578241..2578723 1 NC_017856.1 hypothetical protein 2578723 12843713 Q7C_2584 Methylophaga frappieri hypothetical protein YP_006294392.1 2578241 D 754477 CDS YP_006294393.1 387131503 12843714 2578723..2586876 1 NC_017856.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain; alkaline phosphatase 2586876 12843714 Q7C_2585 Methylophaga frappieri alkaline phosphatase YP_006294393.1 2578723 D 754477 CDS YP_006294394.1 387131504 12843715 complement(2587112..2587237) 1 NC_017856.1 hypothetical protein 2587237 12843715 Q7C_2586 Methylophaga frappieri hypothetical protein YP_006294394.1 2587112 R 754477 CDS YP_006294395.1 387131505 12843716 2587236..2588660 1 NC_017856.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2588660 12843716 Q7C_2587 Methylophaga frappieri diguanylate cyclase YP_006294395.1 2587236 D 754477 CDS YP_006294396.1 387131506 12843717 complement(2588772..2589515) 1 NC_017856.1 PFAM: Dienelactone hydrolase family; 1: dienelactone hydrolase 2589515 12843717 Q7C_2588 Methylophaga frappieri 1: dienelactone hydrolase YP_006294396.1 2588772 R 754477 CDS YP_006294397.1 387131507 12843718 2589622..2590047 1 NC_017856.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 2590047 12843718 Q7C_2589 Methylophaga frappieri glyoxalase/bleomycin resistance protein/dioxygenase YP_006294397.1 2589622 D 754477 CDS YP_006294398.1 387131508 12843719 complement(2590109..2590252) 1 NC_017856.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 2590252 12843719 Q7C_2590 Methylophaga frappieri 50S ribosomal protein L36 YP_006294398.1 2590109 R 754477 CDS YP_006294399.1 387131509 12843720 complement(2590271..2590516) 1 NC_017856.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 2590516 12843720 Q7C_2591 Methylophaga frappieri 50S ribosomal protein L31 YP_006294399.1 2590271 R 754477 CDS YP_006294400.1 387131510 12843721 2590690..2591856 1 NC_017856.1 PFAM: Major Facilitator Superfamily; MFS permease 2591856 12843721 Q7C_2592 Methylophaga frappieri MFS permease YP_006294400.1 2590690 D 754477 CDS YP_006294401.1 387131511 12843722 complement(2591889..2592341) 1 NC_017856.1 hypothetical protein 2592341 12843722 Q7C_2593 Methylophaga frappieri hypothetical protein YP_006294401.1 2591889 R 754477 CDS YP_006294402.1 387131512 12843723 complement(2592494..2593279) 1 NC_017856.1 PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; Zn-finger domain-containing protein (topoisomerase type I-like) 2593279 12843723 Q7C_2594 Methylophaga frappieri Zn-finger domain-containing protein (topoisomerase type I-like) YP_006294402.1 2592494 R 754477 CDS YP_006294403.1 387131513 12843724 2593448..2593639 1 NC_017856.1 hypothetical protein 2593639 12843724 Q7C_2595 Methylophaga frappieri hypothetical protein YP_006294403.1 2593448 D 754477 CDS YP_006294404.1 387131514 12843725 2594087..2595721 1 NC_017856.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 2595721 12843725 Q7C_2596 Methylophaga frappieri lytic murein transglycosylase YP_006294404.1 2594087 D 754477 CDS YP_006294405.1 387131515 12843726 complement(2595811..2596101) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3144); hypothetical protein 2596101 12843726 Q7C_2597 Methylophaga frappieri hypothetical protein YP_006294405.1 2595811 R 754477 CDS YP_006294406.1 387131516 12843727 complement(2596138..2596488) 1 NC_017856.1 PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily 2596488 12843727 Q7C_2598 Methylophaga frappieri enzyme of the cupin superfamily YP_006294406.1 2596138 R 754477 CDS YP_006294407.1 387131517 12843728 complement(2596648..2596821) 1 NC_017856.1 hypothetical protein 2596821 12843728 Q7C_2599 Methylophaga frappieri hypothetical protein YP_006294407.1 2596648 R 754477 CDS YP_006294408.1 387131518 12843729 complement(2596980..2597312) 1 NC_017856.1 PFAM: Transposase IS200 like; transposase 2597312 12843729 Q7C_2600 Methylophaga frappieri transposase YP_006294408.1 2596980 R 754477 CDS YP_006294409.1 387131519 12843730 complement(2597688..2597816) 1 NC_017856.1 hypothetical protein 2597816 12843730 Q7C_2601 Methylophaga frappieri hypothetical protein YP_006294409.1 2597688 R 754477 CDS YP_006294410.1 387131520 12843731 2598432..2600066 1 NC_017856.1 PFAM: Trypsin; V8-like Glu-specific endopeptidase 2600066 12843731 Q7C_2602 Methylophaga frappieri V8-like Glu-specific endopeptidase YP_006294410.1 2598432 D 754477 CDS YP_006294411.1 387131521 12843732 complement(2600399..2600602) 1 NC_017856.1 hypothetical protein 2600602 12843732 Q7C_2603 Methylophaga frappieri hypothetical protein YP_006294411.1 2600399 R 754477 CDS YP_006294412.1 387131522 12843733 complement(2601279..2601683) 1 NC_017856.1 hypothetical protein 2601683 12843733 Q7C_2604 Methylophaga frappieri hypothetical protein YP_006294412.1 2601279 R 754477 CDS YP_006294413.1 387131523 12843734 complement(2601894..2602094) 1 NC_017856.1 hypothetical protein 2602094 12843734 Q7C_2605 Methylophaga frappieri hypothetical protein YP_006294413.1 2601894 R 754477 CDS YP_006294414.1 387131524 12843735 complement(2602444..2603241) 1 NC_017856.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2603241 12843735 Q7C_2606 Methylophaga frappieri short-chain dehydrogenase/reductase SDR YP_006294414.1 2602444 R 754477 CDS YP_006294415.1 387131525 12843736 complement(2603333..2604604) 1 NC_017856.1 PFAM: Trypsin; V8-like Glu-specific endopeptidase 2604604 12843736 Q7C_2607 Methylophaga frappieri V8-like Glu-specific endopeptidase YP_006294415.1 2603333 R 754477 CDS YP_006294416.1 387131526 12843737 2605226..2606797 1 NC_017856.1 adenylate cyclase 2606797 12843737 Q7C_2608 Methylophaga frappieri adenylate cyclase YP_006294416.1 2605226 D 754477 CDS YP_006294417.1 387131527 12843738 2606828..2607094 1 NC_017856.1 hypothetical protein 2607094 12843738 Q7C_2609 Methylophaga frappieri hypothetical protein YP_006294417.1 2606828 D 754477 CDS YP_006294418.1 387131528 12843739 complement(2607095..2607223) 1 NC_017856.1 hypothetical protein 2607223 12843739 Q7C_2610 Methylophaga frappieri hypothetical protein YP_006294418.1 2607095 R 754477 CDS YP_006294419.1 387131529 12843740 2607762..2608115 1 NC_017856.1 hypothetical protein 2608115 12843740 Q7C_2611 Methylophaga frappieri hypothetical protein YP_006294419.1 2607762 D 754477 CDS YP_006294420.1 387131530 12843741 2608112..2608921 1 NC_017856.1 hypothetical protein 2608921 12843741 Q7C_2612 Methylophaga frappieri hypothetical protein YP_006294420.1 2608112 D 754477 CDS YP_006294421.1 387131531 12843742 2609244..2610539 1 NC_017856.1 hypothetical protein 2610539 12843742 Q7C_2613 Methylophaga frappieri hypothetical protein YP_006294421.1 2609244 D 754477 CDS YP_006294422.1 387131532 12843743 2610612..2611382 1 NC_017856.1 hypothetical protein 2611382 12843743 Q7C_2614 Methylophaga frappieri hypothetical protein YP_006294422.1 2610612 D 754477 CDS YP_006294423.1 387131533 12843744 2611394..2613034 1 NC_017856.1 hypothetical protein 2613034 12843744 Q7C_2615 Methylophaga frappieri hypothetical protein YP_006294423.1 2611394 D 754477 CDS YP_006294424.1 387131534 12843745 complement(2613692..2614384) 1 NC_017856.1 PFAM: Integrase core domain; ISxac3 transposase 2614384 12843745 Q7C_2616 Methylophaga frappieri ISxac3 transposase YP_006294424.1 2613692 R 754477 CDS YP_006294425.1 387131535 12843746 complement(2614561..2614860) 1 NC_017856.1 PFAM: Transposase; Mobile element protein 2614860 12843746 Q7C_2617 Methylophaga frappieri Mobile element protein YP_006294425.1 2614561 R 754477 CDS YP_006294426.1 387131536 12843747 complement(2615003..2615728) 1 NC_017856.1 hypothetical protein 2615728 12843747 Q7C_2618 Methylophaga frappieri hypothetical protein YP_006294426.1 2615003 R 754477 CDS YP_006294427.1 387131537 12843748 complement(2616212..2617939) 1 NC_017856.1 PFAM: Ubiquitin-conjugating enzyme; ThiF family; dinucleotide-utilizing protein 2617939 12843748 Q7C_2619 Methylophaga frappieri dinucleotide-utilizing protein YP_006294427.1 2616212 R 754477 CDS YP_006294428.1 387131538 12843749 complement(2617944..2619056) 1 NC_017856.1 hypothetical protein 2619056 12843749 Q7C_2620 Methylophaga frappieri hypothetical protein YP_006294428.1 2617944 R 754477 CDS YP_006294429.1 387131539 12843750 complement(2619047..2620219) 1 NC_017856.1 PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta 2620219 12843750 Q7C_2621 Methylophaga frappieri ribonucleotide reductase subunit beta YP_006294429.1 2619047 R 754477 CDS YP_006294430.1 387131540 12843751 complement(2620216..2623083) 1 NC_017856.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleotide reductase subunit alpha 2623083 12843751 Q7C_2622 Methylophaga frappieri ribonucleotide reductase subunit alpha YP_006294430.1 2620216 R 754477 CDS YP_006294431.1 387131541 12843752 complement(2623385..2623912) 1 NC_017856.1 hypothetical protein 2623912 12843752 Q7C_2623 Methylophaga frappieri hypothetical protein YP_006294431.1 2623385 R 754477 CDS YP_006294432.1 387131542 12843753 complement(2624050..2626200) 1 NC_017856.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 2626200 12843753 Q7C_2624 Methylophaga frappieri methyl-accepting chemotaxis sensory transducer YP_006294432.1 2624050 R 754477 CDS YP_006294433.1 387131543 12843754 complement(2626360..2626827) 1 NC_017856.1 PFAM: AhpC/TSA family; Thiol peroxidase, Bcp-type 2626827 12843754 Q7C_2625 Methylophaga frappieri Thiol peroxidase, Bcp-type YP_006294433.1 2626360 R 754477 CDS YP_006294434.1 387131544 12843755 2626941..2627831 1 NC_017856.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; Dihydrodipicolinate synthase 2627831 12843755 Q7C_2626 Methylophaga frappieri Dihydrodipicolinate synthase YP_006294434.1 2626941 D 754477 CDS YP_006294435.1 387131545 12843756 2627824..2628888 1 NC_017856.1 PFAM: NlpB/DapX lipoprotein; Outer membrane protein NlpB 2628888 12843756 Q7C_2627 Methylophaga frappieri Outer membrane protein NlpB YP_006294435.1 2627824 D 754477 CDS YP_006294436.1 387131546 12843757 2628888..2629655 1 NC_017856.1 PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 2629655 12843757 Q7C_2628 Methylophaga frappieri beta-lactamase YP_006294436.1 2628888 D 754477 CDS YP_006294437.1 387131547 12843758 2629667..2630377 1 NC_017856.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; Phosphoribosylaminoimidazole-succinocarboxamide synthase 2630377 12843758 Q7C_2629 Methylophaga frappieri Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006294437.1 2629667 D 754477 CDS YP_006294438.1 387131548 12843759 complement(2630414..2631787) 1 NC_017856.1 PFAM: Uncharacterized ACR (DUF711); hypothetical protein 2631787 12843759 Q7C_2630 Methylophaga frappieri hypothetical protein YP_006294438.1 2630414 R 754477 CDS YP_006294439.1 387131549 12843760 complement(2631809..2632375) 1 NC_017856.1 amino acid-binding ACT protein 2632375 12843760 Q7C_2631 Methylophaga frappieri amino acid-binding ACT protein YP_006294439.1 2631809 R 754477 CDS YP_006294440.1 387131550 12843761 complement(2632388..2633002) 1 NC_017856.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; ADP-ribose pyrophosphatase 2633002 12843761 Q7C_2632 Methylophaga frappieri ADP-ribose pyrophosphatase YP_006294440.1 2632388 R 754477 CDS YP_006294441.1 387131551 12843762 complement(2632999..2633751) 1 NC_017856.1 PFAM: Protein of unknown function (DUF3108); isoprenoid biosynthesis protein 2633751 12843762 Q7C_2633 Methylophaga frappieri isoprenoid biosynthesis protein YP_006294441.1 2632999 R 754477 CDS YP_006294442.1 387131552 12843763 complement(2633756..2634286) 1 NC_017856.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylglycinamide formyltransferase 2634286 12843763 Q7C_2634 Methylophaga frappieri Phosphoribosylglycinamide formyltransferase YP_006294442.1 2633756 R 754477 CDS YP_006294443.1 387131553 12843764 complement(2634331..2635392) 1 NC_017856.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; Phosphoribosylformylglycinamidine cyclo-ligase 2635392 12843764 Q7C_2635 Methylophaga frappieri Phosphoribosylformylglycinamidine cyclo-ligase YP_006294443.1 2634331 R 754477 CDS YP_006294444.1 387131554 12843765 2635450..2636490 1 NC_017856.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2066); hypothetical protein 2636490 12843765 Q7C_2636 Methylophaga frappieri hypothetical protein YP_006294444.1 2635450 D 754477 CDS YP_006294445.1 387131555 12843766 2636487..2637041 1 NC_017856.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2637041 12843766 Q7C_2637 Methylophaga frappieri CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006294445.1 2636487 D 754477 CDS YP_006294446.1 387131556 12843767 2637017..2638087 1 NC_017856.1 PFAM: Domain of unknown function DUF20; permease often clustered with de novo purine synthesis 2638087 12843767 Q7C_2638 Methylophaga frappieri permease often clustered with de novo purine synthesis YP_006294446.1 2637017 D 754477 CDS YP_006294447.1 387131557 12843768 2638094..2638783 1 NC_017856.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; Chromosomal replication initiator protein DnaA 2638783 12843768 Q7C_2639 Methylophaga frappieri Chromosomal replication initiator protein DnaA YP_006294447.1 2638094 D 754477 CDS YP_006294448.1 387131558 12843769 2638773..2639675 1 NC_017856.1 Regulatory protein, RpfE type 2639675 12843769 Q7C_2640 Methylophaga frappieri Regulatory protein, RpfE type YP_006294448.1 2638773 D 754477 CDS YP_006294449.1 387131559 12843770 2639669..2641396 1 NC_017856.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; ssDNA-specific exonuclease RecJ 2641396 12843770 Q7C_2641 Methylophaga frappieri ssDNA-specific exonuclease RecJ YP_006294449.1 2639669 D 754477 CDS YP_006294450.1 387131560 12843771 2641443..2641826 1 NC_017856.1 hypothetical protein 2641826 12843771 Q7C_2642 Methylophaga frappieri hypothetical protein YP_006294450.1 2641443 D 754477 CDS YP_006294451.1 387131561 12843772 2641835..2642218 1 NC_017856.1 single-stranded-DNA-specific exonuclease RecJ 2642218 12843772 Q7C_2643 Methylophaga frappieri single-stranded-DNA-specific exonuclease RecJ YP_006294451.1 2641835 D 754477 CDS YP_006294452.1 387131562 12843773 2642647..2642775 1 NC_017856.1 hypothetical protein 2642775 12843773 Q7C_2644 Methylophaga frappieri hypothetical protein YP_006294452.1 2642647 D 754477 CDS YP_006294453.1 387131563 12843774 complement(2642858..2643493) 1 NC_017856.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family two component transcriptional regulator 2643493 12843774 Q7C_2645 Methylophaga frappieri LuxR family two component transcriptional regulator YP_006294453.1 2642858 R 754477 CDS YP_006294454.1 387131564 12843775 complement(2643525..2644874) 1 NC_017856.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; sensor histidine kinase 2644874 12843775 Q7C_2646 Methylophaga frappieri sensor histidine kinase YP_006294454.1 2643525 R 754477 CDS YP_006294455.1 387131565 12843776 2645042..2645494 1 NC_017856.1 hypothetical protein 2645494 12843776 Q7C_2647 Methylophaga frappieri hypothetical protein YP_006294455.1 2645042 D 754477 CDS YP_006294456.1 387131566 12843777 2645994..2646209 1 NC_017856.1 hypothetical protein 2646209 12843777 Q7C_2648 Methylophaga frappieri hypothetical protein YP_006294456.1 2645994 D 754477 CDS YP_006294457.1 387131567 12843778 2646203..2648074 1 NC_017856.1 PFAM: DEAD_2; ATP-dependent helicase DinG/Rad3 2648074 12843778 Q7C_2649 Methylophaga frappieri ATP-dependent helicase DinG/Rad3 YP_006294457.1 2646203 D 754477 CDS YP_006294458.1 387131568 12843779 complement(2648122..2648400) 1 NC_017856.1 PFAM: PPIC-type PPIASE domain; Peptidyl-prolyl cis-trans isomerase ppiC 2648400 12843779 Q7C_2650 Methylophaga frappieri Peptidyl-prolyl cis-trans isomerase ppiC YP_006294458.1 2648122 R 754477 CDS YP_006294459.1 387131569 12843780 complement(2648433..2649113) 1 NC_017856.1 PFAM: DJ-1/PfpI family; ThiJ/PfpI family protein 2649113 12843780 Q7C_2651 Methylophaga frappieri ThiJ/PfpI family protein YP_006294459.1 2648433 R 754477 CDS YP_006294460.1 387131570 12843781 complement(2649172..2650230) 1 NC_017856.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type; Dihydroorotase 2650230 12843781 Q7C_2652 Methylophaga frappieri Dihydroorotase YP_006294460.1 2649172 R 754477 CDS YP_006294461.1 387131571 12843782 2650402..2652144 1 NC_017856.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 2652144 12843782 Q7C_2653 Methylophaga frappieri acetolactate synthase large subunit YP_006294461.1 2650402 D 754477 CDS YP_006294462.1 387131572 12843783 2652144..2652638 1 NC_017856.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; Acetolactate synthase small subunit 2652638 12843783 Q7C_2654 Methylophaga frappieri Acetolactate synthase small subunit YP_006294462.1 2652144 D 754477 CDS YP_006294463.1 387131573 12843784 2652671..2653690 1 NC_017856.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 2653690 12843784 Q7C_2655 Methylophaga frappieri ketol-acid reductoisomerase YP_006294463.1 2652671 D 754477 CDS YP_006294464.1 387131574 12843785 2653804..2654547 1 NC_017856.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 2654547 12843785 Q7C_2656 Methylophaga frappieri CDP-diacylglycerol--serine O-phosphatidyltransferase YP_006294464.1 2653804 D 754477 CDS YP_006294465.1 387131575 12843786 2654630..2655046 1 NC_017856.1 PFAM: DNA polymerase III psi subunit; DNA polymerase III psi subunit 2655046 12843786 Q7C_2657 Methylophaga frappieri DNA polymerase III psi subunit YP_006294465.1 2654630 D 754477 CDS YP_006294466.1 387131576 12843787 2655056..2655529 1 NC_017856.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S18p-alanine acetyltransferase 2655529 12843787 Q7C_2658 Methylophaga frappieri ribosomal-protein-S18p-alanine acetyltransferase YP_006294466.1 2655056 D 754477 CDS YP_006294467.1 387131577 12843788 2655611..2656192 1 NC_017856.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; Superoxide dismutase (Fe) 2656192 12843788 Q7C_2659 Methylophaga frappieri Superoxide dismutase (Fe) YP_006294467.1 2655611 D 754477 CDS YP_006294468.1 387131578 12843789 2656341..2657540 1 NC_017856.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases; Acetylornithine aminotransferase 2657540 12843789 Q7C_2660 Methylophaga frappieri Acetylornithine aminotransferase YP_006294468.1 2656341 D 754477 CDS YP_006294469.1 387131579 12843790 2657542..2658438 1 NC_017856.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 2658438 12843790 Q7C_2661 Methylophaga frappieri ornithine carbamoyltransferase YP_006294469.1 2657542 D 754477 CDS YP_006294470.1 387131580 12843791 complement(2658427..2659107) 1 NC_017856.1 PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 2659107 12843791 Q7C_2662 Methylophaga frappieri glucose-1-phosphate thymidylyltransferase YP_006294470.1 2658427 R 754477 CDS YP_006294471.1 387131581 12843792 complement(2659113..2660087) 1 NC_017856.1 PFAM: Phosphotransferase enzyme family; phosphotransferase 2660087 12843792 Q7C_2663 Methylophaga frappieri phosphotransferase YP_006294471.1 2659113 R 754477 CDS YP_006294472.1 387131582 12843793 2660204..2660596 1 NC_017856.1 hypothetical protein 2660596 12843793 Q7C_2664 Methylophaga frappieri hypothetical protein YP_006294472.1 2660204 D 754477 CDS YP_006294473.1 387131583 12843794 complement(2660604..2661185) 1 NC_017856.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; hypothetical protein 2661185 12843794 Q7C_2665 Methylophaga frappieri hypothetical protein YP_006294473.1 2660604 R 754477 CDS YP_006294474.1 387131584 12843795 complement(2661192..2662826) 1 NC_017856.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase 2662826 12843795 Q7C_2666 Methylophaga frappieri phosphoglucomutase YP_006294474.1 2661192 R 754477 CDS YP_006294475.1 387131585 12843796 2662963..2663544 1 NC_017856.1 PFAM: Nuclease-related domain; nuclease-like protein 2663544 12843796 Q7C_2667 Methylophaga frappieri nuclease-like protein YP_006294475.1 2662963 D 754477 CDS YP_006294476.1 387131586 12843797 2663550..2664497 1 NC_017856.1 PFAM: 5'-nucleotidase; 5'-nucleotidase 2664497 12843797 Q7C_2668 Methylophaga frappieri 5'-nucleotidase YP_006294476.1 2663550 D 754477 CDS YP_006294477.1 387131587 12843799 2664747..2666045 1 NC_017856.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; cell division trigger factor 2666045 12843799 Q7C_2670 Methylophaga frappieri cell division trigger factor YP_006294477.1 2664747 D 754477 CDS YP_006294478.1 387131588 12843800 2666129..2666764 1 NC_017856.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 2666764 12843800 Q7C_2671 Methylophaga frappieri ATP-dependent Clp protease proteolytic subunit YP_006294478.1 2666129 D 754477 CDS YP_006294479.1 387131589 12843801 2666792..2668063 1 NC_017856.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 2668063 12843801 Q7C_2672 Methylophaga frappieri ATP-dependent Clp protease ATP-binding subunit ClpX YP_006294479.1 2666792 D 754477 CDS YP_006294480.1 387131590 12843802 2668188..2670617 1 NC_017856.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La; ATP-dependent protease La 2670617 12843802 Q7C_2673 Methylophaga frappieri ATP-dependent protease La YP_006294480.1 2668188 D 754477 CDS YP_006294481.1 387131591 12843803 2670635..2671372 1 NC_017856.1 PFAM: Sporulation related domain; DedD protein 2671372 12843803 Q7C_2674 Methylophaga frappieri DedD protein YP_006294481.1 2670635 D 754477 CDS YP_006294482.1 387131592 12843804 2671474..2671962 1 NC_017856.1 PFAM: Colicin V production protein; colicin V production protein 2671962 12843804 Q7C_2675 Methylophaga frappieri colicin V production protein YP_006294482.1 2671474 D 754477 CDS YP_006294483.1 387131593 12843805 2671986..2673494 1 NC_017856.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; Amidophosphoribosyltransferase 2673494 12843805 Q7C_2676 Methylophaga frappieri Amidophosphoribosyltransferase YP_006294483.1 2671986 D 754477 CDS YP_006294484.1 387131594 12843806 2673537..2674055 1 NC_017856.1 PFAM: Uncharacterized ACR, COG1399; hypothetical protein 2674055 12843806 Q7C_2677 Methylophaga frappieri hypothetical protein YP_006294484.1 2673537 D 754477 CDS YP_006294485.1 387131595 12843807 2674080..2674259 1 NC_017856.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 2674259 12843807 Q7C_2678 Methylophaga frappieri 50S ribosomal protein L32 YP_006294485.1 2674080 D 754477 CDS YP_006294486.1 387131596 12843808 2674271..2675290 1 NC_017856.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-ACP acyltransferase PlsX 2675290 12843808 Q7C_2679 Methylophaga frappieri phosphate:acyl-ACP acyltransferase PlsX YP_006294486.1 2674271 D 754477 CDS YP_006294487.1 387131597 12843809 2675287..2676246 1 NC_017856.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase 2676246 12843809 Q7C_2680 Methylophaga frappieri 3-oxoacyl-ACP synthase YP_006294487.1 2675287 D 754477 CDS YP_006294488.1 387131598 12843810 2676267..2677199 1 NC_017856.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; Malonyl CoA-acyl carrier protein transacylase 2677199 12843810 Q7C_2681 Methylophaga frappieri Malonyl CoA-acyl carrier protein transacylase YP_006294488.1 2676267 D 754477 CDS YP_006294489.1 387131599 12843811 2677202..2677945 1 NC_017856.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 2677945 12843811 Q7C_2682 Methylophaga frappieri 3-oxoacyl-ACP reductase YP_006294489.1 2677202 D 754477 CDS YP_006294490.1 387131600 12843812 2678086..2678322 1 NC_017856.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2678322 12843812 Q7C_2683 Methylophaga frappieri acyl carrier protein YP_006294490.1 2678086 D 754477 CDS YP_006294491.1 387131601 12843813 2678418..2679659 1 NC_017856.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase 2679659 12843813 Q7C_2684 Methylophaga frappieri 3-oxoacyl-ACP synthase YP_006294491.1 2678418 D 754477 CDS YP_006294492.1 387131602 12843814 2679670..2680503 1 NC_017856.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; Aminodeoxychorismate lyase 2680503 12843814 Q7C_2685 Methylophaga frappieri Aminodeoxychorismate lyase YP_006294492.1 2679670 D 754477 CDS YP_006294493.1 387131603 12843815 2680500..2681510 1 NC_017856.1 PFAM: YceG-like family; TIGRFAM: hypothetical protein, YceG family; YceG-like protein 2681510 12843815 Q7C_2686 Methylophaga frappieri YceG-like protein YP_006294493.1 2680500 D 754477 CDS YP_006294494.1 387131604 12843816 2681507..2682133 1 NC_017856.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 2682133 12843816 Q7C_2687 Methylophaga frappieri thymidylate kinase YP_006294494.1 2681507 D 754477 CDS YP_006294495.1 387131605 12843817 2682136..2683086 1 NC_017856.1 TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' 2683086 12843817 Q7C_2688 Methylophaga frappieri DNA polymerase III subunit delta' YP_006294495.1 2682136 D 754477 CDS YP_006294496.1 387131606 12843818 2683095..2683448 1 NC_017856.1 PFAM: PilZ domain; type IV pilus assembly protein PilZ 2683448 12843818 Q7C_2689 Methylophaga frappieri type IV pilus assembly protein PilZ YP_006294496.1 2683095 D 754477 CDS YP_006294497.1 387131607 12843819 2683480..2684256 1 NC_017856.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 2684256 12843819 Q7C_2690 Methylophaga frappieri deoxyribonuclease YP_006294497.1 2683480 D 754477 CDS YP_006294498.1 387131608 12843820 2684259..2684888 1 NC_017856.1 PFAM: GDSL-like Lipase/Acylhydrolase; lipase 2684888 12843820 Q7C_2691 Methylophaga frappieri lipase YP_006294498.1 2684259 D 754477 CDS YP_006294499.1 387131609 12843821 2685148..2686542 1 NC_017856.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator domain / Aspartate aminotransferase 2686542 12843821 Q7C_2692 Methylophaga frappieri GntR family transcriptional regulator domain / Aspartate aminotransferase YP_006294499.1 2685148 D 754477 CDS YP_006294500.1 387131610 12843822 2686575..2687993 1 NC_017856.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG 2687993 12843822 Q7C_2693 Methylophaga frappieri type cbb3 cytochrome oxidase biogenesis protein CcoG YP_006294500.1 2686575 D 754477 CDS YP_006294501.1 387131611 12843823 2687990..2689144 1 NC_017856.1 PFAM: Protein of unknown function (DUF1228); MFS superfamily transporter 2689144 12843823 Q7C_2694 Methylophaga frappieri MFS superfamily transporter YP_006294501.1 2687990 D 754477 CDS YP_006294502.1 387131612 12843824 complement(2689153..2690139) 1 NC_017856.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; Alcohol dehydrogenase 2690139 12843824 Q7C_2695 Methylophaga frappieri Alcohol dehydrogenase YP_006294502.1 2689153 R 754477 CDS YP_006294503.1 387131613 12843825 complement(2690150..2690782) 1 NC_017856.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2690782 12843825 Q7C_2696 Methylophaga frappieri GTP cyclohydrolase II YP_006294503.1 2690150 R 754477 CDS YP_006294504.1 387131614 12843826 complement(2690876..2691031) 1 NC_017856.1 hypothetical protein 2691031 12843826 Q7C_2697 Methylophaga frappieri hypothetical protein YP_006294504.1 2690876 R 754477 CDS YP_006294505.1 387131615 12843827 2691165..2692646 1 NC_017856.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M 2692646 12843827 Q7C_2698 Methylophaga frappieri type I restriction-modification system, DNA-methyltransferase subunit M YP_006294505.1 2691165 D 754477 CDS YP_006294506.1 387131616 12843828 2692643..2693803 1 NC_017856.1 PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 2693803 12843828 Q7C_2699 Methylophaga frappieri type I restriction-modification system, specificity subunit S YP_006294506.1 2692643 D 754477 CDS YP_006294507.1 387131617 12843829 2693833..2697285 1 NC_017856.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3559); IMG reference gene:2510782860_SP; type I restriction-modification system, restriction subunit R 2697285 12843829 Q7C_2700 Methylophaga frappieri type I restriction-modification system, restriction subunit R YP_006294507.1 2693833 D 754477 CDS YP_006297530.1 387128926 12848216 complement(58..312) 1 NC_017858.1 hypothetical protein 312 12848216 Q7C_2701 Methylophaga frappieri hypothetical protein YP_006297530.1 58 R 754477 CDS YP_006297531.1 387128927 12848217 complement(305..1378) 1 NC_017858.1 KlcB protein 1378 12848217 Q7C_2702 Methylophaga frappieri KlcB protein YP_006297531.1 305 R 754477 CDS YP_006297532.1 387128928 12848218 complement(1419..1853) 1 NC_017858.1 PFAM: Antirestriction protein; KlcA protein 1853 12848218 Q7C_2703 Methylophaga frappieri KlcA protein YP_006297532.1 1419 R 754477 CDS YP_006297533.1 387128929 12848219 complement(1975..2271) 1 NC_017858.1 hypothetical protein 2271 12848219 Q7C_2704 Methylophaga frappieri hypothetical protein YP_006297533.1 1975 R 754477 CDS YP_006297534.1 387128930 12848220 complement(4021..5151) 1 NC_017858.1 PFAM: TrfA protein; TrfA2 5151 12848220 Q7C_2705 Methylophaga frappieri TrfA2 YP_006297534.1 4021 R 754477 CDS YP_006297535.1 387128931 12848221 complement(5197..5544) 1 NC_017858.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein 5544 12848221 Q7C_2706 Methylophaga frappieri ssDNA-binding protein YP_006297535.1 5197 R 754477 CDS YP_006297536.1 387128932 12848222 5670..6026 1 NC_017858.1 PFAM: Helix-turn-helix; conjugative transfer protein TrbA 6026 12848222 Q7C_2707 Methylophaga frappieri conjugative transfer protein TrbA YP_006297536.1 5670 D 754477 CDS YP_006297537.1 387128933 12848223 6278..7237 1 NC_017858.1 PFAM: Type II/IV secretion system protein; TIGRFAM: P-type conjugative transfer ATPase TrbB; conjugative transfer protein TrbB 7237 12848223 Q7C_2708 Methylophaga frappieri conjugative transfer protein TrbB YP_006297537.1 6278 D 754477 CDS YP_006297538.1 387128934 12848224 7264..7689 1 NC_017858.1 PFAM: TrbC/VIRB2 family; conjugative transfer protein TrbC 7689 12848224 Q7C_2709 Methylophaga frappieri conjugative transfer protein TrbC YP_006297538.1 7264 D 754477 CDS YP_006297539.1 387128935 12848225 7770..8003 1 NC_017858.1 PFAM: Type IV secretory pathway, VirB3-like protein; conjugative transfer protein TrbD 8003 12848225 Q7C_2710 Methylophaga frappieri conjugative transfer protein TrbD YP_006297539.1 7770 D 754477 CDS YP_006297540.1 387128936 12848226 8000..10540 1 NC_017858.1 PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; conjugative transfer protein TrbE 10540 12848226 Q7C_2711 Methylophaga frappieri conjugative transfer protein TrbE YP_006297540.1 8000 D 754477 CDS YP_006297541.1 387128937 12848171 10540..11322 1 NC_017858.1 PFAM: VirB8 protein; conjugative transfer protein TrbF 11322 12848171 Q7C_2712 Methylophaga frappieri conjugative transfer protein TrbF YP_006297541.1 10540 D 754477 CDS YP_006297542.1 387128938 12848172 11340..12245 1 NC_017858.1 PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; conjugative transfer protein TrbG 12245 12848172 Q7C_2713 Methylophaga frappieri conjugative transfer protein TrbG YP_006297542.1 11340 D 754477 CDS YP_006297543.1 387128939 12848173 12452..12721 1 NC_017858.1 PFAM: Conjugal transfer protein TrbH; conjugative transfer protein TrbH 12721 12848173 Q7C_2714 Methylophaga frappieri conjugative transfer protein TrbH YP_006297543.1 12452 D 754477 CDS YP_006297544.1 387128940 12848174 12725..14152 1 NC_017858.1 PFAM: Bacterial conjugation TrbI-like protein; conjugative transfer protein TrbI 14152 12848174 Q7C_2715 Methylophaga frappieri conjugative transfer protein TrbI YP_006297544.1 12725 D 754477 CDS YP_006297545.1 387128941 12848175 14180..14941 1 NC_017858.1 PFAM: Type IV secretion system proteins; TIGRFAM: P-type conjugative transfer protein TrbJ; conjugative transfer protein TrbJ 14941 12848175 Q7C_2716 Methylophaga frappieri conjugative transfer protein TrbJ YP_006297545.1 14180 D 754477 CDS YP_006297546.1 387128942 12848176 15029..15178 1 NC_017858.1 hypothetical protein 15178 12848176 Q7C_2717 Methylophaga frappieri hypothetical protein YP_006297546.1 15029 D 754477 CDS YP_006297547.1 387128943 12848177 15190..15945 1 NC_017858.1 PFAM: Etoposide-induced protein 2.4 (EI24); conjugative transfer protein TrbL 15945 12848177 Q7C_2718 Methylophaga frappieri conjugative transfer protein TrbL YP_006297547.1 15190 D 754477 CDS YP_006297548.1 387128944 12848178 16261..18309 1 NC_017858.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 18309 12848178 Q7C_2719 Methylophaga frappieri TonB-dependent receptor YP_006297548.1 16261 D 754477 CDS YP_006297549.1 387128945 12848179 complement(18371..18574) 1 NC_017858.1 PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 18574 12848179 Q7C_2720 Methylophaga frappieri NAD(P)H-nitrite reductase YP_006297549.1 18371 R 754477 CDS YP_006297550.1 387128946 12848180 18826..20172 1 NC_017858.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL; conjugative transfer protein TrbL 20172 12848180 Q7C_2721 Methylophaga frappieri conjugative transfer protein TrbL YP_006297550.1 18826 D 754477 CDS YP_006297551.1 387128947 12848181 complement(20454..21134) 1 NC_017858.1 hypothetical protein 21134 12848181 Q7C_2722 Methylophaga frappieri hypothetical protein YP_006297551.1 20454 R 754477 CDS YP_006297552.1 387128948 12848182 21165..21314 1 NC_017858.1 conjugative transfer protein TrbN 21314 12848182 Q7C_2723 Methylophaga frappieri conjugative transfer protein TrbN YP_006297552.1 21165 D 754477 CDS YP_006297553.1 387128949 12848183 21311..22039 1 NC_017858.1 PFAM: TraX protein; conjugative transfer protein TrbP 22039 12848183 Q7C_2724 Methylophaga frappieri conjugative transfer protein TrbP YP_006297553.1 21311 D 754477 CDS YP_006297554.1 387128950 12848184 complement(22130..22249) 1 NC_017858.1 hypothetical protein 22249 12848184 Q7C_2725 Methylophaga frappieri hypothetical protein YP_006297554.1 22130 R 754477 CDS YP_006297555.1 387128951 12848185 22255..22368 1 NC_017858.1 hypothetical protein 22368 12848185 Q7C_2726 Methylophaga frappieri hypothetical protein YP_006297555.1 22255 D 754477 CDS YP_006297556.1 387128952 12848186 22497..22766 1 NC_017858.1 hypothetical protein 22766 12848186 Q7C_2727 Methylophaga frappieri hypothetical protein YP_006297556.1 22497 D 754477 CDS YP_006297557.1 387128953 12848187 23081..23200 1 NC_017858.1 hypothetical protein 23200 12848187 Q7C_2728 Methylophaga frappieri hypothetical protein YP_006297557.1 23081 D 754477 CDS YP_006297558.1 387128954 12848188 23242..23388 1 NC_017858.1 hypothetical protein 23388 12848188 Q7C_2729 Methylophaga frappieri hypothetical protein YP_006297558.1 23242 D 754477 CDS YP_006297559.1 387128955 12848189 23385..24353 1 NC_017858.1 hypothetical protein 24353 12848189 Q7C_2730 Methylophaga frappieri hypothetical protein YP_006297559.1 23385 D 754477 CDS YP_006297560.1 387128956 12848190 24363..24689 1 NC_017858.1 DNA-binding protein 24689 12848190 Q7C_2731 Methylophaga frappieri DNA-binding protein YP_006297560.1 24363 D 754477 CDS YP_006297561.1 387128957 12848191 24748..26049 1 NC_017858.1 PFAM: Transposase DDE domain; transposase, IS4 family protein 26049 12848191 Q7C_2732 Methylophaga frappieri transposase, IS4 family protein YP_006297561.1 24748 D 754477 CDS YP_006297562.1 387128958 12848192 26145..26309 1 NC_017858.1 hypothetical protein 26309 12848192 Q7C_2733 Methylophaga frappieri hypothetical protein YP_006297562.1 26145 D 754477 CDS YP_006297563.1 387128959 12848193 complement(26329..26787) 1 NC_017858.1 PFAM: Resolvase, N terminal domain; resolvase 26787 12848193 Q7C_2734 Methylophaga frappieri resolvase YP_006297563.1 26329 R 754477 CDS YP_006297564.1 387128960 12848194 complement(27221..27469) 1 NC_017858.1 hypothetical protein 27469 12848194 Q7C_2735 Methylophaga frappieri hypothetical protein YP_006297564.1 27221 R 754477 CDS YP_006297565.1 387128961 12848195 27607..28470 1 NC_017858.1 PFAM: Exonuclease; DNA polymerase III, epsilon subunit-related 3'-5' exonuclease 28470 12848195 Q7C_2736 Methylophaga frappieri DNA polymerase III, epsilon subunit-related 3'-5' exonuclease YP_006297565.1 27607 D 754477 CDS YP_006297566.1 387128962 12848196 complement(28514..31675) 1 NC_017858.1 PFAM: Toprim domain; Domain of unknown function (DUF1738); DNA primase 31675 12848196 Q7C_2737 Methylophaga frappieri DNA primase YP_006297566.1 28514 R 754477 CDS YP_006297567.1 387128963 12848197 complement(31679..31921) 1 NC_017858.1 Protein traD 31921 12848197 Q7C_2738 Methylophaga frappieri Protein traD YP_006297567.1 31679 R 754477 CDS YP_006297568.1 387128964 12848198 complement(31927..33987) 1 NC_017858.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III 33987 12848198 Q7C_2739 Methylophaga frappieri DNA topoisomerase III YP_006297568.1 31927 R 754477 CDS YP_006297569.1 387128965 12848199 complement(34007..34543) 1 NC_017858.1 PFAM: Peptidase S26; TIGRFAM: conjugative transfer signal peptidase TraF; TraF protein of DNA transfer system 34543 12848199 Q7C_2740 Methylophaga frappieri TraF protein of DNA transfer system YP_006297569.1 34007 R 754477 CDS YP_006297570.1 387128966 12848200 complement(34540..36447) 1 NC_017858.1 PFAM: TraG/TraD family; protein TraG 36447 12848200 Q7C_2741 Methylophaga frappieri protein TraG YP_006297570.1 34540 R 754477 CDS YP_006297571.1 387128967 12848201 complement(36444..38711) 1 NC_017858.1 PFAM: Relaxase/Mobilisation nuclease domain; TraI protein 38711 12848201 Q7C_2742 Methylophaga frappieri TraI protein YP_006297571.1 36444 R 754477 CDS YP_006297572.1 387128968 12848202 complement(38764..39135) 1 NC_017858.1 TraJ protein 39135 12848202 Q7C_2743 Methylophaga frappieri TraJ protein YP_006297572.1 38764 R 754477 CDS YP_006297573.1 387128969 12848203 39514..39951 1 NC_017858.1 OriT-binding protein, TraK 39951 12848203 Q7C_2744 Methylophaga frappieri OriT-binding protein, TraK YP_006297573.1 39514 D 754477 CDS YP_006297574.1 387128970 12848204 39951..40676 1 NC_017858.1 PFAM: Anion-transporting ATPase; TraL protein 40676 12848204 Q7C_2745 Methylophaga frappieri TraL protein YP_006297574.1 39951 D 754477 CDS YP_006297575.1 387128971 12848205 40676..41113 1 NC_017858.1 PFAM: Transcriptional activator TraM; TraM 41113 12848205 Q7C_2746 Methylophaga frappieri TraM YP_006297575.1 40676 D 754477 CDS YP_006297576.1 387128972 12848206 complement(41167..42489) 1 NC_017858.1 PFAM: Phosphoribosyl transferase domain; TraN protein 42489 12848206 Q7C_2747 Methylophaga frappieri TraN protein YP_006297576.1 41167 R 754477 CDS YP_006297577.1 387128973 12848207 complement(42517..42738) 1 NC_017858.1 upf54.8 42738 12848207 Q7C_2748 Methylophaga frappieri upf54.8 YP_006297577.1 42517 R 754477 CDS YP_006297578.1 387128974 12848208 complement(43022..43999) 1 NC_017858.1 PFAM: Plasmid replication region DNA-binding N-term; KfrA 43999 12848208 Q7C_2749 Methylophaga frappieri KfrA YP_006297578.1 43022 R 754477 CDS YP_006297579.1 387128975 12848209 complement(44143..44265) 1 NC_017858.1 hypothetical protein 44265 12848209 Q7C_2750 Methylophaga frappieri hypothetical protein YP_006297579.1 44143 R 754477 CDS YP_006297580.1 387128976 12848210 complement(44367..45389) 1 NC_017858.1 PFAM: ParB-like nuclease domain; KorB C-terminal beta-barrel domain; KorB domain; TIGRFAM: ParB-like partition proteins; chromosome partitioning ATPase 45389 12848210 Q7C_2751 Methylophaga frappieri chromosome partitioning ATPase YP_006297580.1 44367 R 754477 CDS YP_006297581.1 387128977 12848211 complement(45386..46144) 1 NC_017858.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome (plasmid) partitioning protein ParA 46144 12848211 Q7C_2752 Methylophaga frappieri chromosome (plasmid) partitioning protein ParA YP_006297581.1 45386 R 754477 CDS YP_006297582.1 387128978 12848212 complement(46144..46440) 1 NC_017858.1 KorA protein 46440 12848212 Q7C_2753 Methylophaga frappieri KorA protein YP_006297582.1 46144 R 754477 CDS YP_006297583.1 387128979 12848213 complement(46559..46909) 1 NC_017858.1 KleE protein 46909 12848213 Q7C_2754 Methylophaga frappieri KleE protein YP_006297583.1 46559 R 754477 CDS YP_006297584.1 387128980 12848214 complement(47043..47279) 1 NC_017858.1 KleA protein 47279 12848214 Q7C_2755 Methylophaga frappieri KleA protein YP_006297584.1 47043 R 754477 CDS YP_006297585.1 387128981 12848215 complement(47430..47684) 1 NC_017858.1 IMG reference gene:2510785556_SP; KorC 47684 12848215 Q7C_2756 Methylophaga frappieri KorC YP_006297585.1 47430 R 754477 CDS