-- dump date 20140619_145155 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 754476000001 SEQ_END SEQ_END NC_017857.1 3137192 3137192 DR NC_017857.1; contig end 3137192..3137192 Methylophaga nitratireducenticrescens YP_006294508.1 CDS Q7A_2 NC_017857.1 309 977 R PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; queuosine biosynthesis protein QueC complement(309..977) Methylophaga nitratireducenticrescens 12846688 YP_006294509.1 CDS Q7A_3 NC_017857.1 974 1615 R PFAM: Radical SAM superfamily; queuosine biosynthesis radical SAM protein QueE complement(974..1615) Methylophaga nitratireducenticrescens 12845297 YP_006294510.1 CDS Q7A_4 NC_017857.1 1639 2469 R PFAM: Tetratricopeptide repeat; TIGRFAM: tol-pal system protein YbgF; hypothetical protein complement(1639..2469) Methylophaga nitratireducenticrescens 12845513 YP_006294511.1 CDS Q7A_5 NC_017857.1 2471 3040 R PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein complement(2471..3040) Methylophaga nitratireducenticrescens 12845514 YP_006294512.1 CDS Q7A_6 NC_017857.1 3062 4363 R PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; tolB protein precursor complement(3062..4363) Methylophaga nitratireducenticrescens 12845515 YP_006294513.1 CDS Q7A_7 NC_017857.1 4375 5151 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TolA protein complement(4375..5151) Methylophaga nitratireducenticrescens 12845516 YP_006294514.1 CDS Q7A_8 NC_017857.1 5463 5909 R PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TolR protein complement(5463..5909) Methylophaga nitratireducenticrescens 12845517 YP_006294515.1 CDS Q7A_9 NC_017857.1 5924 6592 R PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; motA/TolQ/ExbB proton channel family protein complement(5924..6592) Methylophaga nitratireducenticrescens 12846546 YP_006294516.1 CDS Q7A_10 NC_017857.1 6582 6986 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(6582..6986) Methylophaga nitratireducenticrescens 12846714 YP_006294517.1 CDS Q7A_11 NC_017857.1 6986 7999 R PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase RuvB complement(6986..7999) Methylophaga nitratireducenticrescens 12846715 YP_006294518.1 CDS Q7A_12 NC_017857.1 8002 8598 R PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase RuvA complement(8002..8598) Methylophaga nitratireducenticrescens 12846716 YP_006294519.1 CDS Q7A_13 NC_017857.1 8595 9134 R PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease RuvC complement(8595..9134) Methylophaga nitratireducenticrescens 12846717 YP_006294520.1 CDS Q7A_14 NC_017857.1 9149 9898 R PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; DNA-binding regulatory protein complement(9149..9898) Methylophaga nitratireducenticrescens 12846718 YP_006294521.1 CDS Q7A_15 NC_017857.1 9946 10860 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase complement(9946..10860) Methylophaga nitratireducenticrescens 12846719 YP_006294522.1 CDS Q7A_16 NC_017857.1 10918 13761 R PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase complement(10918..13761) Methylophaga nitratireducenticrescens 12846720 YP_006294523.1 CDS Q7A_17 NC_017857.1 14085 14453 D hypothetical protein 14085..14453 Methylophaga nitratireducenticrescens 12846721 YP_006294524.1 CDS Q7A_18 NC_017857.1 14543 16171 R PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; Heat shock protein 60 family chaperone GroEL complement(14543..16171) Methylophaga nitratireducenticrescens 12846722 YP_006294525.1 CDS Q7A_19 NC_017857.1 16229 16519 R PFAM: Chaperonin 10 Kd subunit; Heat shock protein 60 family co-chaperone GroES complement(16229..16519) Methylophaga nitratireducenticrescens 12846723 YP_006294526.1 CDS Q7A_20 NC_017857.1 16667 17122 R PFAM: FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(16667..17122) Methylophaga nitratireducenticrescens 12846724 YP_006294527.1 CDS Q7A_21 NC_017857.1 17351 18703 D PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 17351..18703 Methylophaga nitratireducenticrescens 12846725 YP_006294528.1 CDS Q7A_22 NC_017857.1 18797 20587 D PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 18797..20587 Methylophaga nitratireducenticrescens 12846726 YP_006294529.1 CDS Q7A_23 NC_017857.1 20621 21043 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); Arsenate reductase complement(20621..21043) Methylophaga nitratireducenticrescens 12846727 YP_006294530.1 CDS Q7A_24 NC_017857.1 21216 21893 D SH3 domain; hypothetical protein 21216..21893 Methylophaga nitratireducenticrescens 12846728 YP_006294531.1 CDS Q7A_25 NC_017857.1 21935 22480 R PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase protein complement(21935..22480) Methylophaga nitratireducenticrescens 12846729 YP_006294532.1 CDS Q7A_26 NC_017857.1 23104 23226 D hypothetical protein 23104..23226 Methylophaga nitratireducenticrescens 12846730 YP_006294533.1 CDS Q7A_27 NC_017857.1 23417 25201 D PFAM: ABC transporter transmembrane region; ABC transporter; ATP-binding/permease fusion ABC transporter-like protein 23417..25201 Methylophaga nitratireducenticrescens 12846731 YP_006294534.1 CDS Q7A_28 NC_017857.1 25535 27388 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(25535..27388) Methylophaga nitratireducenticrescens 12846732 YP_006294535.1 CDS Q7A_29 NC_017857.1 27511 28806 D PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase; N-acetylglutamate synthase 27511..28806 Methylophaga nitratireducenticrescens 12846733 YP_006294536.1 CDS Q7A_30 NC_017857.1 28803 29318 R PFAM: NUDIX domain; adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase complement(28803..29318) Methylophaga nitratireducenticrescens 12846734 YP_006294537.1 CDS Q7A_31 NC_017857.1 29467 30123 D TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase 29467..30123 Methylophaga nitratireducenticrescens 12846735 YP_006294538.1 CDS Q7A_32 NC_017857.1 30170 31612 D PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B 30170..31612 Methylophaga nitratireducenticrescens 12846736 YP_006294539.1 CDS Q7A_33 NC_017857.1 31820 32962 D PFAM: FIST C domain; FIST N domain; hypothetical protein 31820..32962 Methylophaga nitratireducenticrescens 12846737 YP_006294540.1 CDS Q7A_34 NC_017857.1 32982 34256 R PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family; glutamate--cysteine ligase complement(32982..34256) Methylophaga nitratireducenticrescens 12846738 YP_006294541.1 CDS Q7A_35 NC_017857.1 34336 34452 R hypothetical protein complement(34336..34452) Methylophaga nitratireducenticrescens 12846739 YP_006294542.1 CDS Q7A_36 NC_017857.1 34944 35312 D PFAM: Response regulator receiver domain; twitching motility protein PilG 34944..35312 Methylophaga nitratireducenticrescens 12846740 YP_006294543.1 CDS Q7A_37 NC_017857.1 35320 35691 D PFAM: Response regulator receiver domain; twitching motility protein PilH 35320..35691 Methylophaga nitratireducenticrescens 12846741 YP_006294544.1 CDS Q7A_38 NC_017857.1 35688 36236 D PFAM: CheW-like domain; type IV pili signal transduction protein PilI 35688..36236 Methylophaga nitratireducenticrescens 12846742 YP_006294545.1 CDS Q7A_39 NC_017857.1 36261 37523 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; type IV pilus biogenesis protein PilJ 36261..37523 Methylophaga nitratireducenticrescens 12846743 YP_006294546.1 CDS Q7A_40 NC_017857.1 37552 43257 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 37552..43257 Methylophaga nitratireducenticrescens 12846744 YP_006294547.1 CDS Q7A_41 NC_017857.1 43280 43765 D PFAM: CheW-like domain; hypothetical protein 43280..43765 Methylophaga nitratireducenticrescens 12846745 YP_006294548.1 CDS Q7A_42 NC_017857.1 43775 45718 D PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 43775..45718 Methylophaga nitratireducenticrescens 12846746 YP_006294549.1 CDS Q7A_43 NC_017857.1 45728 46969 D PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase 45728..46969 Methylophaga nitratireducenticrescens 12846747 YP_006294550.1 CDS Q7A_44 NC_017857.1 47032 48015 D PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 47032..48015 Methylophaga nitratireducenticrescens 12846748 YP_006294551.1 CDS Q7A_45 NC_017857.1 48025 48951 D PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; S6 modification enzyme RimK 48025..48951 Methylophaga nitratireducenticrescens 12846749 YP_006294552.1 CDS Q7A_46 NC_017857.1 48941 49819 D PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; Triphosphoribosyl-dephospho-CoA synthetase 48941..49819 Methylophaga nitratireducenticrescens 12846750 YP_006294553.1 CDS Q7A_47 NC_017857.1 49938 50456 D PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 49938..50456 Methylophaga nitratireducenticrescens 12846751 YP_006294554.1 CDS Q7A_48 NC_017857.1 50498 51193 R PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; histidine biosynthesis protein complement(50498..51193) Methylophaga nitratireducenticrescens 12846752 YP_006294555.1 CDS Q7A_49 NC_017857.1 51303 51491 D hypothetical protein 51303..51491 Methylophaga nitratireducenticrescens 12846753 YP_006294556.1 CDS Q7A_50 NC_017857.1 51452 52210 D PFAM: ATP-grasp domain; ATP-utilizing enzyme 51452..52210 Methylophaga nitratireducenticrescens 12846754 YP_006294557.1 CDS Q7A_51 NC_017857.1 52203 53246 D TIGRFAM: probable H4MPT-linked C1 transfer pathway protein; H4MPT-linked C1 transfer pathway-like protein 52203..53246 Methylophaga nitratireducenticrescens 12846755 YP_006294558.1 CDS Q7A_52 NC_017857.1 53256 54641 D PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; aminodeoxychorismate synthase, component I, clade 2; Para-aminobenzoate synthase 53256..54641 Methylophaga nitratireducenticrescens 12846756 YP_006294559.1 CDS Q7A_53 NC_017857.1 54642 55217 D PFAM: Amino acid kinase family; delta 1-pyrroline-5-carboxylate synthetase 54642..55217 Methylophaga nitratireducenticrescens 12846757 YP_006294560.1 CDS Q7A_54 NC_017857.1 55214 56395 D PFAM: Pyridoxal-dependent decarboxylase conserved domain; pyridoxal-dependent decarboxylase 55214..56395 Methylophaga nitratireducenticrescens 12846758 YP_006294561.1 CDS Q7A_55 NC_017857.1 56370 58073 R PFAM: ATPase family associated with various cellular activities (AAA); peptidoglycan-binding domain 1 complement(56370..58073) Methylophaga nitratireducenticrescens 12846759 YP_006294562.1 CDS Q7A_56 NC_017857.1 58082 59170 R PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(58082..59170) Methylophaga nitratireducenticrescens 12846760 YP_006294563.1 CDS Q7A_57 NC_017857.1 59173 59676 R PFAM: Shikimate kinase; shikimate kinase complement(59173..59676) Methylophaga nitratireducenticrescens 12846761 YP_006294564.1 CDS Q7A_58 NC_017857.1 59645 59815 D hypothetical protein 59645..59815 Methylophaga nitratireducenticrescens 12846762 YP_006294565.1 CDS Q7A_59 NC_017857.1 59793 61928 R PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus biogenesis protein PilQ complement(59793..61928) Methylophaga nitratireducenticrescens 12846763 YP_006294566.1 CDS Q7A_60 NC_017857.1 61981 62529 R PFAM: Pilus assembly protein, PilP; type IV pilus biogenesis protein PilP complement(61981..62529) Methylophaga nitratireducenticrescens 12846764 YP_006294567.1 CDS Q7A_61 NC_017857.1 62529 63116 R PFAM: Pilus assembly protein, PilO; type IV pilus biogenesis protein PilO complement(62529..63116) Methylophaga nitratireducenticrescens 12846765 YP_006294568.1 CDS Q7A_62 NC_017857.1 63119 63679 R PFAM: Fimbrial assembly protein (PilN); type IV pilus biogenesis protein PilN complement(63119..63679) Methylophaga nitratireducenticrescens 12846766 YP_006294569.1 CDS Q7A_63 NC_017857.1 63679 64737 R PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus biogenesis protein PilM complement(63679..64737) Methylophaga nitratireducenticrescens 12846767 YP_006294570.1 CDS Q7A_64 NC_017857.1 64938 67325 D PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; multimodular transpeptidase-transglycosylase 64938..67325 Methylophaga nitratireducenticrescens 12846768 YP_006294571.1 CDS Q7A_65 NC_017857.1 67473 68570 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(67473..68570) Methylophaga nitratireducenticrescens 12846769 YP_006294572.1 CDS Q7A_66 NC_017857.1 68647 69816 D PFAM: NnrS protein; NnrS protein 68647..69816 Methylophaga nitratireducenticrescens 12846770 YP_006294573.1 CDS Q7A_67 NC_017857.1 69826 70263 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR 69826..70263 Methylophaga nitratireducenticrescens 12846771 YP_006294574.1 CDS Q7A_68 NC_017857.1 70285 70959 R PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein; nitric oxide-dependent regulator DnrN or NorA complement(70285..70959) Methylophaga nitratireducenticrescens 12846772 YP_006294575.1 CDS Q7A_69 NC_017857.1 71392 71517 D hypothetical protein 71392..71517 Methylophaga nitratireducenticrescens 12846773 YP_006294576.1 CDS Q7A_70 NC_017857.1 71848 73323 R PFAM: Peptidase family M48; Zn-dependent protease complement(71848..73323) Methylophaga nitratireducenticrescens 12846774 YP_006294577.1 CDS Q7A_71 NC_017857.1 73351 73551 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(73351..73551) Methylophaga nitratireducenticrescens 12846775 YP_006294578.1 CDS Q7A_72 NC_017857.1 73675 74250 R PFAM: Tellurite resistance protein TehB; type 12 methyltransferase complement(73675..74250) Methylophaga nitratireducenticrescens 12846776 YP_006294579.1 CDS Q7A_73 NC_017857.1 74250 75701 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Potassium uptake protein TrkH complement(74250..75701) Methylophaga nitratireducenticrescens 12846777 YP_006294580.1 CDS Q7A_74 NC_017857.1 75708 77219 R PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(75708..77219) Methylophaga nitratireducenticrescens 12846778 YP_006294581.1 CDS Q7A_75 NC_017857.1 77219 78088 R PFAM: CBS domain; Transporter associated domain; magnesium and cobalt efflux protein CorC complement(77219..78088) Methylophaga nitratireducenticrescens 12846779 YP_006294582.1 CDS Q7A_76 NC_017857.1 78085 78549 R PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metal-dependent hydrolase complement(78085..78549) Methylophaga nitratireducenticrescens 12846780 YP_006294583.1 CDS Q7A_77 NC_017857.1 78546 79520 R PFAM: PhoH-like protein; phosphate starvation-inducible ATPase complement(78546..79520) Methylophaga nitratireducenticrescens 12846781 YP_006294584.1 CDS Q7A_78 NC_017857.1 79542 80909 R PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 methylthiotransferase complement(79542..80909) Methylophaga nitratireducenticrescens 12846782 YP_006294585.1 CDS Q7A_79 NC_017857.1 81059 81190 R hypothetical protein complement(81059..81190) Methylophaga nitratireducenticrescens 12846783 YP_006294586.1 CDS Q7A_80 NC_017857.1 81303 81434 R hypothetical protein complement(81303..81434) Methylophaga nitratireducenticrescens 12846784 YP_006294587.1 CDS Q7A_81 NC_017857.1 81471 81905 D PFAM: Domain of unknown function (DUF336); hypothetical protein 81471..81905 Methylophaga nitratireducenticrescens 12846785 YP_006294588.1 CDS Q7A_82 NC_017857.1 82039 82797 R PFAM: Thrombospondin C-terminal region; thrombospondin complement(82039..82797) Methylophaga nitratireducenticrescens 12846786 YP_006294589.1 CDS Q7A_83 NC_017857.1 83109 84851 D PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; hypothetical protein 83109..84851 Methylophaga nitratireducenticrescens 12846787 YP_006294590.1 CDS Q7A_84 NC_017857.1 84935 86509 R PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; KefB-like protein complement(84935..86509) Methylophaga nitratireducenticrescens 12846788 YP_006294591.1 CDS Q7A_85 NC_017857.1 86665 86961 R PFAM: Domain of unknown function (DUF1840); hypothetical protein complement(86665..86961) Methylophaga nitratireducenticrescens 12846789 YP_006294592.1 CDS Q7A_86 NC_017857.1 86983 87108 R hypothetical protein complement(86983..87108) Methylophaga nitratireducenticrescens 12846790 YP_006294593.1 CDS Q7A_87 NC_017857.1 87209 87529 R hypothetical protein complement(87209..87529) Methylophaga nitratireducenticrescens 12846791 YP_006294594.1 CDS Q7A_88 NC_017857.1 87646 87918 R PFAM: Domain of unknown function (DUF1971); hypothetical protein complement(87646..87918) Methylophaga nitratireducenticrescens 12846792 YP_006294595.1 CDS Q7A_89 NC_017857.1 88054 88665 R PFAM: Uracil DNA glycosylase superfamily; uracil-DNA glycosylase complement(88054..88665) Methylophaga nitratireducenticrescens 12846793 YP_006294596.1 CDS Q7A_90 NC_017857.1 88706 88960 R PFAM: Protein of unknown function (DUF1488); hypothetical protein complement(88706..88960) Methylophaga nitratireducenticrescens 12846794 YP_006294597.1 CDS Q7A_91 NC_017857.1 89147 90433 D PFAM: MgtC family; hypothetical protein 89147..90433 Methylophaga nitratireducenticrescens 12846795 YP_006294598.1 CDS Q7A_92 NC_017857.1 90673 92136 R phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase complement(90673..92136) Methylophaga nitratireducenticrescens 12846796 YP_006294599.1 CDS Q7A_93 NC_017857.1 92448 94286 D PFAM: Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase 92448..94286 Methylophaga nitratireducenticrescens 12846797 YP_006294600.1 CDS Q7A_94 NC_017857.1 94502 95557 D TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter 94502..95557 Methylophaga nitratireducenticrescens 12846798 YP_006294601.1 CDS Q7A_95 NC_017857.1 95619 96626 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN complement(95619..96626) Methylophaga nitratireducenticrescens 12846799 YP_006294602.1 CDS Q7A_96 NC_017857.1 96694 96912 R hypothetical protein complement(96694..96912) Methylophaga nitratireducenticrescens 12846800 YP_006294603.1 CDS Q7A_97 NC_017857.1 97263 98207 R PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase complement(97263..98207) Methylophaga nitratireducenticrescens 12846801 YP_006294604.1 CDS Q7A_98 NC_017857.1 98311 98649 R hypothetical protein complement(98311..98649) Methylophaga nitratireducenticrescens 12846802 YP_006294605.1 CDS Q7A_99 NC_017857.1 98825 99340 R hypothetical protein complement(98825..99340) Methylophaga nitratireducenticrescens 12846803 YP_006294606.1 CDS Q7A_100 NC_017857.1 99517 100032 R PFAM: Phosphate-starvation-inducible E; hypothetical protein complement(99517..100032) Methylophaga nitratireducenticrescens 12846804 YP_006294607.1 CDS Q7A_101 NC_017857.1 100233 100958 R PFAM: MOSC domain; hypothetical protein complement(100233..100958) Methylophaga nitratireducenticrescens 12846805 YP_006294608.1 CDS Q7A_102 NC_017857.1 100973 101125 R hypothetical protein complement(100973..101125) Methylophaga nitratireducenticrescens 12846806 YP_006294609.1 CDS Q7A_103 NC_017857.1 101510 102673 R PFAM: Cytochrome P450; cytochrome P450 hydroxylase complement(101510..102673) Methylophaga nitratireducenticrescens 12846807 YP_006294610.1 CDS Q7A_104 NC_017857.1 103179 103853 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 103179..103853 Methylophaga nitratireducenticrescens 12846808 YP_006294611.1 CDS Q7A_107 NC_017857.1 106088 107224 D PFAM: Peptidase propeptide and YPEB domain; Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB; hypothetical protein 106088..107224 Methylophaga nitratireducenticrescens 12846810 YP_006294612.1 CDS Q7A_108 NC_017857.1 107233 107967 R PFAM: Prokaryotic cytochrome b561; cytochrome b complement(107233..107967) Methylophaga nitratireducenticrescens 12846811 YP_006294613.1 CDS Q7A_109 NC_017857.1 108065 108496 R TIGRFAM: hemerythrin-like metal-binding domain; methyl-accepting chemotaxis protein complement(108065..108496) Methylophaga nitratireducenticrescens 12846812 YP_006294614.1 CDS Q7A_110 NC_017857.1 108498 109331 R PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase complement(108498..109331) Methylophaga nitratireducenticrescens 12846813 YP_006294615.1 CDS Q7A_111 NC_017857.1 109459 110397 R PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; sigma-54-dependent transcriptional regulator complement(109459..110397) Methylophaga nitratireducenticrescens 12846814 YP_006294616.1 CDS Q7A_112 NC_017857.1 110440 111168 R PFAM: Cytochrome C biogenesis protein transmembrane region; Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein; hypothetical protein complement(110440..111168) Methylophaga nitratireducenticrescens 12846815 YP_006294617.1 CDS Q7A_113 NC_017857.1 111597 112001 D PFAM: Cytochrome c; cytochrome c 111597..112001 Methylophaga nitratireducenticrescens 12846816 YP_006294618.1 CDS Q7A_114 NC_017857.1 112050 112583 R hypothetical protein complement(112050..112583) Methylophaga nitratireducenticrescens 12846817 YP_006294619.1 CDS Q7A_115 NC_017857.1 112639 114144 R PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; exopolyphosphatase complement(112639..114144) Methylophaga nitratireducenticrescens 12846818 YP_006294620.1 CDS Q7A_116 NC_017857.1 114279 114995 R PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate transport system regulatory protein PhoU complement(114279..114995) Methylophaga nitratireducenticrescens 12846819 YP_006294621.1 CDS Q7A_117 NC_017857.1 115019 115861 R PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate transport ATP-binding protein complement(115019..115861) Methylophaga nitratireducenticrescens 12846820 YP_006294622.1 CDS Q7A_118 NC_017857.1 115861 117528 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease complement(115861..117528) Methylophaga nitratireducenticrescens 12846821 YP_006294623.1 CDS Q7A_119 NC_017857.1 117541 119817 R PFAM: Binding-protein-dependent transport system inner membrane component; phosphate ABC transporter permease complement(117541..119817) Methylophaga nitratireducenticrescens 12846822 YP_006294624.1 CDS Q7A_120 NC_017857.1 119973 120929 R TIGRFAM: phosphate binding protein; phosphate ABC transporter complement(119973..120929) Methylophaga nitratireducenticrescens 12846823 YP_006294625.1 CDS Q7A_121 NC_017857.1 121071 122360 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR; phosphate regulon sensor protein PhoR complement(121071..122360) Methylophaga nitratireducenticrescens 12846824 YP_006294626.1 CDS Q7A_122 NC_017857.1 122373 123065 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein complement(122373..123065) Methylophaga nitratireducenticrescens 12846825 YP_006294627.1 CDS Q7A_123 NC_017857.1 123147 124370 R PFAM: Major Facilitator Superfamily; permease complement(123147..124370) Methylophaga nitratireducenticrescens 12846826 YP_006294628.1 CDS Q7A_124 NC_017857.1 124429 126078 R PFAM: Phosphate transporter family; low-affinity inorganic phosphate transporter complement(124429..126078) Methylophaga nitratireducenticrescens 12846827 YP_006294629.1 CDS Q7A_125 NC_017857.1 126215 128053 D PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; protein-disulfide reductase 126215..128053 Methylophaga nitratireducenticrescens 12846828 YP_006294630.1 CDS Q7A_126 NC_017857.1 128189 128626 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 128189..128626 Methylophaga nitratireducenticrescens 12846829 YP_006294631.1 CDS Q7A_127 NC_017857.1 128636 129103 D PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein 128636..129103 Methylophaga nitratireducenticrescens 12846830 YP_006294632.1 CDS Q7A_128 NC_017857.1 129158 130498 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 129158..130498 Methylophaga nitratireducenticrescens 12846831 YP_006294633.1 CDS Q7A_129 NC_017857.1 130510 131379 D PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 130510..131379 Methylophaga nitratireducenticrescens 12846832 YP_006294634.1 CDS Q7A_130 NC_017857.1 131372 132373 D PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA dihydrouridine synthase B 131372..132373 Methylophaga nitratireducenticrescens 12846833 YP_006294635.1 CDS Q7A_131 NC_017857.1 132370 132660 D PFAM: Bacterial regulatory protein, Fis family; DNA-binding protein Fis 132370..132660 Methylophaga nitratireducenticrescens 12846834 YP_006294636.1 CDS Q7A_132 NC_017857.1 132690 134255 D PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase 132690..134255 Methylophaga nitratireducenticrescens 12846835 YP_006294637.1 CDS Q7A_133 NC_017857.1 134269 136902 D PFAM: Adenylate cyclase, class-I; adenylate cyclase 134269..136902 Methylophaga nitratireducenticrescens 12846836 YP_006294638.1 CDS Q7A_134 NC_017857.1 136956 137984 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 136956..137984 Methylophaga nitratireducenticrescens 12846837 YP_006294639.1 CDS Q7A_135 NC_017857.1 138047 138184 R hypothetical protein complement(138047..138184) Methylophaga nitratireducenticrescens 12846838 YP_006294640.1 CDS Q7A_136 NC_017857.1 138143 138688 D hypothetical protein 138143..138688 Methylophaga nitratireducenticrescens 12846839 YP_006294641.1 CDS Q7A_137 NC_017857.1 138697 139134 D PFAM: Protein of unknown function, DUF583; integral membrane protein CcmA 138697..139134 Methylophaga nitratireducenticrescens 12846840 YP_006294642.1 CDS Q7A_138 NC_017857.1 139285 139629 D PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron binding-like protein 139285..139629 Methylophaga nitratireducenticrescens 12846841 YP_006294643.1 CDS Q7A_139 NC_017857.1 139758 141047 D PFAM: Predicted membrane protein (DUF2254); hypothetical protein 139758..141047 Methylophaga nitratireducenticrescens 12846842 YP_006294644.1 CDS Q7A_140 NC_017857.1 141126 141752 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 141126..141752 Methylophaga nitratireducenticrescens 12846843 YP_006294645.1 CDS Q7A_141 NC_017857.1 141756 142928 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND efflux system, membrane fusion protein CmeA 141756..142928 Methylophaga nitratireducenticrescens 12846844 YP_006294646.1 CDS Q7A_142 NC_017857.1 142931 146077 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 142931..146077 Methylophaga nitratireducenticrescens 12846845 YP_006294647.1 CDS Q7A_143 NC_017857.1 146074 147516 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC 146074..147516 Methylophaga nitratireducenticrescens 12846846 YP_006294648.1 CDS Q7A_144 NC_017857.1 147596 147775 D hypothetical protein 147596..147775 Methylophaga nitratireducenticrescens 12846847 YP_006294649.1 CDS Q7A_145 NC_017857.1 147966 150026 D PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT 147966..150026 Methylophaga nitratireducenticrescens 12846848 YP_006294650.1 CDS Q7A_146 NC_017857.1 150302 150460 D hypothetical protein 150302..150460 Methylophaga nitratireducenticrescens 12846849 YP_006294651.1 CDS Q7A_147 NC_017857.1 150511 151428 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 150511..151428 Methylophaga nitratireducenticrescens 12846850 YP_006294652.1 CDS Q7A_148 NC_017857.1 151515 152921 D PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 151515..152921 Methylophaga nitratireducenticrescens 12846851 YP_006294653.1 CDS Q7A_149 NC_017857.1 152875 153429 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; Lactoylglutathione lyase complement(152875..153429) Methylophaga nitratireducenticrescens 12846852 YP_006294654.1 CDS Q7A_150 NC_017857.1 153456 154409 R PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); magnesium and cobalt transport protein CorA complement(153456..154409) Methylophaga nitratireducenticrescens 12846853 YP_006294655.1 CDS Q7A_151 NC_017857.1 154790 155413 R PFAM: Methyltransferase domain; double-stranded RNA 3'-methylase complement(154790..155413) Methylophaga nitratireducenticrescens 12846854 YP_006294656.1 CDS Q7A_152 NC_017857.1 155432 156790 R PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; GTPase and tRNA-U34 5-formylation enzyme TrmE complement(155432..156790) Methylophaga nitratireducenticrescens 12846855 YP_006294657.1 CDS Q7A_153 NC_017857.1 156848 158491 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; inner membrane protein translocase complement(156848..158491) Methylophaga nitratireducenticrescens 12846856 YP_006294658.1 CDS Q7A_154 NC_017857.1 158705 159037 R PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component complement(158705..159037) Methylophaga nitratireducenticrescens 12846857 YP_006294659.1 CDS Q7A_155 NC_017857.1 159087 159221 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 complement(159087..159221) Methylophaga nitratireducenticrescens 12846858 YP_006294660.1 CDS Q7A_156 NC_017857.1 159487 160851 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 159487..160851 Methylophaga nitratireducenticrescens 12846859 YP_006294661.1 CDS Q7A_157 NC_017857.1 160866 161969 D PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 160866..161969 Methylophaga nitratireducenticrescens 12846860 YP_006294662.1 CDS Q7A_158 NC_017857.1 162035 163237 R PFAM: HemY protein N-terminus; TIGRFAM: hemY protein; HemY-like protein complement(162035..163237) Methylophaga nitratireducenticrescens 12846861 YP_006294663.1 CDS Q7A_159 NC_017857.1 163234 164268 R PFAM: HemX; hypothetical protein complement(163234..164268) Methylophaga nitratireducenticrescens 12846862 YP_006294664.1 CDS Q7A_160 NC_017857.1 164258 165022 R PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-III synthase complement(164258..165022) Methylophaga nitratireducenticrescens 12846863 YP_006294665.1 CDS Q7A_161 NC_017857.1 165015 165944 R PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase complement(165015..165944) Methylophaga nitratireducenticrescens 12846864 YP_006294666.1 CDS Q7A_162 NC_017857.1 166064 167446 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 166064..167446 Methylophaga nitratireducenticrescens 12846865 YP_006294667.1 CDS Q7A_163 NC_017857.1 167538 168902 D PFAM: Protein of unknown function (DUF2914); hypothetical protein 167538..168902 Methylophaga nitratireducenticrescens 12846866 YP_006294668.1 CDS Q7A_164 NC_017857.1 168899 169114 R hypothetical protein complement(168899..169114) Methylophaga nitratireducenticrescens 12846867 YP_006294669.1 CDS Q7A_165 NC_017857.1 169141 169491 R PFAM: Protein of unknown function (DUF3325); iron uptake protein complement(169141..169491) Methylophaga nitratireducenticrescens 12846868 YP_006294670.1 CDS Q7A_166 NC_017857.1 169491 171134 R iron-regulated membrane protein complement(169491..171134) Methylophaga nitratireducenticrescens 12846869 YP_006294671.1 CDS Q7A_167 NC_017857.1 171131 171412 R PFAM: Protein of unknown function (DUF3649); hypothetical protein complement(171131..171412) Methylophaga nitratireducenticrescens 12846870 YP_006294672.1 CDS Q7A_168 NC_017857.1 171948 174320 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(171948..174320) Methylophaga nitratireducenticrescens 12846871 YP_006294673.1 CDS Q7A_169 NC_017857.1 174440 175447 R PFAM: FecR protein; transmembrane sensor complement(174440..175447) Methylophaga nitratireducenticrescens 12846872 YP_006294674.1 CDS Q7A_170 NC_017857.1 175447 175962 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Sigma factor complement(175447..175962) Methylophaga nitratireducenticrescens 12846873 YP_006294675.1 CDS Q7A_171 NC_017857.1 176275 178350 D PFAM: Catalase; Catalase-related immune-responsive; catalase 176275..178350 Methylophaga nitratireducenticrescens 12846874 YP_006294676.1 CDS Q7A_172 NC_017857.1 178463 179635 D PFAM: Domain of Unknown Function (DUF748); hypothetical protein 178463..179635 Methylophaga nitratireducenticrescens 12846875 YP_006294677.1 CDS Q7A_173 NC_017857.1 179663 179959 R PFAM: Rho termination factor, N-terminal domain; Rho termination factor complement(179663..179959) Methylophaga nitratireducenticrescens 12846876 YP_006294678.1 CDS Q7A_174 NC_017857.1 180263 182719 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; OMR family iron-siderophore receptor precursor complement(180263..182719) Methylophaga nitratireducenticrescens 12846877 YP_006294679.1 CDS Q7A_175 NC_017857.1 182801 183775 R PFAM: FecR protein; FecR protein complement(182801..183775) Methylophaga nitratireducenticrescens 12846878 YP_006294680.1 CDS Q7A_176 NC_017857.1 183772 184311 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 factor complement(183772..184311) Methylophaga nitratireducenticrescens 12846879 YP_006294681.1 CDS Q7A_177 NC_017857.1 184471 185166 R PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; isoprenylcysteine carboxyl methyltransferase complement(184471..185166) Methylophaga nitratireducenticrescens 12846880 YP_006294682.1 CDS Q7A_178 NC_017857.1 185169 185333 R hypothetical protein complement(185169..185333) Methylophaga nitratireducenticrescens 12846881 YP_006294683.1 CDS Q7A_179 NC_017857.1 185335 186396 R iron-regulated membrane protein complement(185335..186396) Methylophaga nitratireducenticrescens 12846882 YP_006294684.1 CDS Q7A_180 NC_017857.1 186462 188450 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor complement(186462..188450) Methylophaga nitratireducenticrescens 12846883 YP_006294685.1 CDS Q7A_181 NC_017857.1 188634 189623 D transcriptional regulator 188634..189623 Methylophaga nitratireducenticrescens 12846884 YP_006294686.1 CDS Q7A_182 NC_017857.1 189729 189899 D hypothetical protein 189729..189899 Methylophaga nitratireducenticrescens 12846885 YP_006294687.1 CDS Q7A_183 NC_017857.1 190102 190440 D FIG00594950; hypothetical protein 190102..190440 Methylophaga nitratireducenticrescens 12846886 YP_006294688.1 CDS Q7A_184 NC_017857.1 190630 191460 R PFAM: Putative esterase; hydrolase complement(190630..191460) Methylophaga nitratireducenticrescens 12846887 YP_006294689.1 CDS Q7A_185 NC_017857.1 191467 193875 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(191467..193875) Methylophaga nitratireducenticrescens 12846888 YP_006294690.1 CDS Q7A_186 NC_017857.1 194045 195022 R PFAM: FecR protein; transmembrane sensor complement(194045..195022) Methylophaga nitratireducenticrescens 12846889 YP_006294691.1 CDS Q7A_187 NC_017857.1 195019 195519 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase complement(195019..195519) Methylophaga nitratireducenticrescens 12846890 YP_006294692.1 CDS Q7A_188 NC_017857.1 195631 195777 R hypothetical protein complement(195631..195777) Methylophaga nitratireducenticrescens 12846891 YP_006294693.1 CDS Q7A_189 NC_017857.1 196065 197153 R PepSY-associated TM helix domain; hypothetical protein complement(196065..197153) Methylophaga nitratireducenticrescens 12846892 YP_006294694.1 CDS Q7A_190 NC_017857.1 197199 199616 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor complement(197199..199616) Methylophaga nitratireducenticrescens 12846893 YP_006294695.1 CDS Q7A_191 NC_017857.1 199719 200687 R PFAM: FecR protein; Fe2+-dicitrate sensor complement(199719..200687) Methylophaga nitratireducenticrescens 12846894 YP_006294696.1 CDS Q7A_192 NC_017857.1 200697 201197 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase complement(200697..201197) Methylophaga nitratireducenticrescens 12846895 YP_006294697.1 CDS Q7A_193 NC_017857.1 201489 203033 D PFAM: Fic/DOC family; Filamentation induced by cAMP protein Fic 201489..203033 Methylophaga nitratireducenticrescens 12846896 YP_006294698.1 CDS Q7A_194 NC_017857.1 202993 203145 R hypothetical protein complement(202993..203145) Methylophaga nitratireducenticrescens 12846897 YP_006294699.1 CDS Q7A_195 NC_017857.1 203108 203281 D TIGRFAM: addiction module antidote protein, HigA family; addiction module antidote protein 203108..203281 Methylophaga nitratireducenticrescens 12846898 YP_006294700.1 CDS Q7A_196 NC_017857.1 203517 205865 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(203517..205865) Methylophaga nitratireducenticrescens 12846899 YP_006294701.1 CDS Q7A_197 NC_017857.1 206082 207080 R PFAM: FecR protein; transmembrane sensor complement(206082..207080) Methylophaga nitratireducenticrescens 12846900 YP_006294702.1 CDS Q7A_198 NC_017857.1 207077 207376 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Sigma factor complement(207077..207376) Methylophaga nitratireducenticrescens 12846901 YP_006294703.1 CDS Q7A_199 NC_017857.1 207413 207586 R PFAM: Sigma-70 region 2; RNA polymerase complement(207413..207586) Methylophaga nitratireducenticrescens 12846902 YP_006294704.1 CDS Q7A_200 NC_017857.1 207793 210219 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor complement(207793..210219) Methylophaga nitratireducenticrescens 12846903 YP_006294705.1 CDS Q7A_201 NC_017857.1 210295 211248 R PFAM: FecR protein; Fe2+-dicitrate sensor complement(210295..211248) Methylophaga nitratireducenticrescens 12846904 YP_006294706.1 CDS Q7A_202 NC_017857.1 211254 211751 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase complement(211254..211751) Methylophaga nitratireducenticrescens 12846905 YP_006294707.1 CDS Q7A_203 NC_017857.1 211904 214351 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(211904..214351) Methylophaga nitratireducenticrescens 12846906 YP_006294708.1 CDS Q7A_204 NC_017857.1 214686 215627 R PFAM: FecR protein; FecR protein complement(214686..215627) Methylophaga nitratireducenticrescens 12846907 YP_006294709.1 CDS Q7A_205 NC_017857.1 215641 216009 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase complement(215641..216009) Methylophaga nitratireducenticrescens 12846908 YP_006294710.1 CDS Q7A_206 NC_017857.1 216622 217077 R PFAM: Tellurite resistance protein TerB; hypothetical protein complement(216622..217077) Methylophaga nitratireducenticrescens 12846909 YP_006294711.1 CDS Q7A_207 NC_017857.1 217130 218260 R PFAM: Acetyltransferase (GNAT) family; Domain of unknown function (DUF3335); GNAT family acetyltransferase complement(217130..218260) Methylophaga nitratireducenticrescens 12846910 YP_006294712.1 CDS Q7A_208 NC_017857.1 218244 219314 R PFAM: Protein of unknown function (DUF2817); hypothetical protein complement(218244..219314) Methylophaga nitratireducenticrescens 12846911 YP_006294713.1 CDS Q7A_209 NC_017857.1 219334 219450 D hypothetical protein 219334..219450 Methylophaga nitratireducenticrescens 12846912 YP_006294714.1 CDS Q7A_210 NC_017857.1 219482 220966 D PFAM: RimK-like ATP-grasp domain; ribosomal protein S6 glutaminyl transferase 219482..220966 Methylophaga nitratireducenticrescens 12846913 YP_006294715.1 CDS Q7A_211 NC_017857.1 221044 223101 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor complement(221044..223101) Methylophaga nitratireducenticrescens 12846914 YP_006294716.1 CDS Q7A_212 NC_017857.1 223254 224147 D PFAM: DnaJ domain; DnaJ C terminal region; DnaJ-class molecular chaperone CbpA 223254..224147 Methylophaga nitratireducenticrescens 12846915 YP_006294717.1 CDS Q7A_213 NC_017857.1 224169 225554 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; HtrA protease/chaperone protein / Serine protease (Protease DO) 224169..225554 Methylophaga nitratireducenticrescens 12846916 YP_006294718.1 CDS Q7A_214 NC_017857.1 225666 226142 R PFAM: Protein of unknown function (DUF1348); hypothetical protein complement(225666..226142) Methylophaga nitratireducenticrescens 12846917 YP_006294719.1 CDS Q7A_215 NC_017857.1 226244 226819 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 226244..226819 Methylophaga nitratireducenticrescens 12846918 YP_006294720.1 CDS Q7A_216 NC_017857.1 227064 227237 R hypothetical protein complement(227064..227237) Methylophaga nitratireducenticrescens 12846919 YP_006294721.1 CDS Q7A_217 NC_017857.1 227622 228101 D PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 227622..228101 Methylophaga nitratireducenticrescens 12846920 YP_006294722.1 CDS Q7A_218 NC_017857.1 228808 229722 R PFAM: PemK-like protein; hypothetical protein complement(228808..229722) Methylophaga nitratireducenticrescens 12846921 YP_006294723.1 CDS Q7A_219 NC_017857.1 229756 231123 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase complement(229756..231123) Methylophaga nitratireducenticrescens 12846922 YP_006294724.1 CDS Q7A_220 NC_017857.1 231219 231641 R PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase subunit epsilon complement(231219..231641) Methylophaga nitratireducenticrescens 12846923 YP_006294725.1 CDS Q7A_221 NC_017857.1 231660 233036 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase subunit beta complement(231660..233036) Methylophaga nitratireducenticrescens 12846924 YP_006294726.1 CDS Q7A_222 NC_017857.1 233087 233884 R PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase subunit gamma complement(233087..233884) Methylophaga nitratireducenticrescens 12846925 YP_006294727.1 CDS Q7A_223 NC_017857.1 233968 235509 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase subunit alpha complement(233968..235509) Methylophaga nitratireducenticrescens 12846926 YP_006294728.1 CDS Q7A_224 NC_017857.1 235534 236064 R PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase subunit delta complement(235534..236064) Methylophaga nitratireducenticrescens 12846927 YP_006294729.1 CDS Q7A_225 NC_017857.1 236077 236547 R PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase subunit B complement(236077..236547) Methylophaga nitratireducenticrescens 12846928 YP_006294730.1 CDS Q7A_226 NC_017857.1 236593 236826 R PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase subunit C complement(236593..236826) Methylophaga nitratireducenticrescens 12846929 YP_006294731.1 CDS Q7A_227 NC_017857.1 236884 237783 R PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase subunit A complement(236884..237783) Methylophaga nitratireducenticrescens 12846930 YP_006294732.1 CDS Q7A_228 NC_017857.1 237791 238033 R PFAM: ATP synthase I chain; ATP synthase I subunit complement(237791..238033) Methylophaga nitratireducenticrescens 12846931 YP_006294733.1 CDS Q7A_229 NC_017857.1 238453 239316 R PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; hypothetical protein complement(238453..239316) Methylophaga nitratireducenticrescens 12846932 YP_006294734.1 CDS Q7A_230 NC_017857.1 239333 240115 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein complement(239333..240115) Methylophaga nitratireducenticrescens 12846933 YP_006294735.1 CDS Q7A_231 NC_017857.1 240121 240747 R PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; rRNA small subunit methyltransferase complement(240121..240747) Methylophaga nitratireducenticrescens 12846934 YP_006294736.1 CDS Q7A_232 NC_017857.1 240747 242630 R PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(240747..242630) Methylophaga nitratireducenticrescens 12846935 YP_006294737.1 CDS Q7A_233 NC_017857.1 242779 243138 D PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 242779..243138 Methylophaga nitratireducenticrescens 12846936 YP_006294738.1 CDS Q7A_234 NC_017857.1 243135 243911 R PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(243135..243911) Methylophaga nitratireducenticrescens 12846937 YP_006294739.1 CDS Q7A_235 NC_017857.1 244192 244911 D PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial; hypothetical protein 244192..244911 Methylophaga nitratireducenticrescens 12846938 YP_006294740.1 CDS Q7A_236 NC_017857.1 244967 245305 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 244967..245305 Methylophaga nitratireducenticrescens 12846939 YP_006294741.1 CDS Q7A_237 NC_017857.1 245324 246607 D PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; Ammonium transporter 245324..246607 Methylophaga nitratireducenticrescens 12846940 YP_006294742.1 CDS Q7A_238 NC_017857.1 246679 247743 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; Uroporphyrinogen III decarboxylase complement(246679..247743) Methylophaga nitratireducenticrescens 12846941 YP_006294743.1 CDS Q7A_239 NC_017857.1 247877 249325 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase (NADPH) small subunit complement(247877..249325) Methylophaga nitratireducenticrescens 12846942 YP_006294744.1 CDS Q7A_240 NC_017857.1 249306 253697 R PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADPH) large subunit complement(249306..253697) Methylophaga nitratireducenticrescens 12846943 YP_006294745.1 CDS Q7A_241 NC_017857.1 253832 253957 R hypothetical protein complement(253832..253957) Methylophaga nitratireducenticrescens 12846944 YP_006294746.1 CDS Q7A_242 NC_017857.1 254031 254525 D PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 254031..254525 Methylophaga nitratireducenticrescens 12846945 YP_006294747.1 CDS Q7A_243 NC_017857.1 254540 255670 D PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; Phosphoribosylaminoimidazole carboxylase ATPase subunit 254540..255670 Methylophaga nitratireducenticrescens 12846946 YP_006294748.1 CDS Q7A_244 NC_017857.1 255712 255945 D PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; SelT/selW/selH selenoprotein 255712..255945 Methylophaga nitratireducenticrescens 12846947 YP_006294749.1 CDS Q7A_245 NC_017857.1 255999 258281 R PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I complement(255999..258281) Methylophaga nitratireducenticrescens 12846948 YP_006294750.1 CDS Q7A_246 NC_017857.1 258366 258833 R PFAM: Protein of unknown function (DUF494); hypothetical protein complement(258366..258833) Methylophaga nitratireducenticrescens 12846949 YP_006294751.1 CDS Q7A_247 NC_017857.1 258857 259978 R PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; Rossmann fold nucleotide-binding protein Smf complement(258857..259978) Methylophaga nitratireducenticrescens 12846950 YP_006294752.1 CDS Q7A_248 NC_017857.1 259989 261020 R PFAM: LysM domain; hypothetical protein complement(259989..261020) Methylophaga nitratireducenticrescens 12846951 YP_006294753.1 CDS Q7A_249 NC_017857.1 261207 261524 D PFAM: Cytochrome c; cytochrome c553 261207..261524 Methylophaga nitratireducenticrescens 12846952 YP_006294754.1 CDS Q7A_250 NC_017857.1 261563 262066 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 261563..262066 Methylophaga nitratireducenticrescens 12846953 YP_006294755.1 CDS Q7A_251 NC_017857.1 262075 263007 D PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 262075..263007 Methylophaga nitratireducenticrescens 12846954 YP_006294756.1 CDS Q7A_252 NC_017857.1 263000 264307 D PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; ribosomal RNA small subunit methyltransferase B 263000..264307 Methylophaga nitratireducenticrescens 12846955 YP_006294757.1 CDS Q7A_253 NC_017857.1 264273 264866 D hypothetical protein 264273..264866 Methylophaga nitratireducenticrescens 12846956 YP_006294758.1 CDS Q7A_254 NC_017857.1 264851 267010 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; nitrogen regulation protein ntrY 264851..267010 Methylophaga nitratireducenticrescens 12846957 YP_006294759.1 CDS Q7A_255 NC_017857.1 267013 268287 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; nitrogen assimilation regulatory protein NtrX 267013..268287 Methylophaga nitratireducenticrescens 12846958 YP_006294760.1 CDS Q7A_256 NC_017857.1 268297 269670 D PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 268297..269670 Methylophaga nitratireducenticrescens 12846959 YP_006294761.1 CDS Q7A_257 NC_017857.1 269710 270231 D PFAM: Uncharacterized ACR, COG1678; hypothetical protein 269710..270231 Methylophaga nitratireducenticrescens 12846960 YP_006294762.1 CDS Q7A_258 NC_017857.1 270228 270647 D PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; Holliday junction resolvase 270228..270647 Methylophaga nitratireducenticrescens 12846961 YP_006294763.1 CDS Q7A_259 NC_017857.1 270650 271174 D PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase 270650..271174 Methylophaga nitratireducenticrescens 12846962 YP_006294764.1 CDS Q7A_260 NC_017857.1 271164 272135 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 271164..272135 Methylophaga nitratireducenticrescens 12846963 YP_006294765.1 CDS Q7A_261 NC_017857.1 272135 273418 D PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase 272135..273418 Methylophaga nitratireducenticrescens 12846964 YP_006294766.1 CDS Q7A_262 NC_017857.1 273438 273614 D PFAM: Protein of unknown function (DUF3012); hypothetical protein 273438..273614 Methylophaga nitratireducenticrescens 12846965 YP_006294767.1 CDS Q7A_263 NC_017857.1 273611 274366 D hypothetical protein 273611..274366 Methylophaga nitratireducenticrescens 12846966 YP_006294768.1 CDS Q7A_265 NC_017857.1 275097 275933 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor complement(275097..275933) Methylophaga nitratireducenticrescens 12846968 YP_006294769.1 CDS Q7A_266 NC_017857.1 276079 278298 R PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; monomeric isocitrate dehydrogenase (NADP) complement(276079..278298) Methylophaga nitratireducenticrescens 12846969 YP_006294770.1 CDS Q7A_267 NC_017857.1 278786 279808 R PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein complement(278786..279808) Methylophaga nitratireducenticrescens 12846970 YP_006294771.1 CDS Q7A_268 NC_017857.1 279805 281271 R PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein complement(279805..281271) Methylophaga nitratireducenticrescens 12846971 YP_006294772.1 CDS Q7A_269 NC_017857.1 281325 282362 R PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein complement(281325..282362) Methylophaga nitratireducenticrescens 12846972 YP_006294773.1 CDS Q7A_270 NC_017857.1 282363 283175 R hypothetical protein complement(282363..283175) Methylophaga nitratireducenticrescens 12846973 YP_006294774.1 CDS Q7A_271 NC_017857.1 283810 283923 R hypothetical protein complement(283810..283923) Methylophaga nitratireducenticrescens 12846974 YP_006294775.1 CDS Q7A_272 NC_017857.1 284469 286637 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 284469..286637 Methylophaga nitratireducenticrescens 12846975 YP_006294776.1 CDS Q7A_273 NC_017857.1 287216 287338 D hypothetical protein 287216..287338 Methylophaga nitratireducenticrescens 12846976 YP_006294777.1 CDS Q7A_274 NC_017857.1 287460 287885 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; pseudoazurin complement(287460..287885) Methylophaga nitratireducenticrescens 12846977 YP_006294778.1 CDS Q7A_275 NC_017857.1 288192 289268 R PFAM: Domain of unknown function DUF20; permease PerM (YfgO) complement(288192..289268) Methylophaga nitratireducenticrescens 12846978 YP_006294779.1 CDS Q7A_276 NC_017857.1 289336 289485 D hypothetical protein 289336..289485 Methylophaga nitratireducenticrescens 12846979 YP_006294780.1 CDS Q7A_277 NC_017857.1 289490 289627 R hypothetical protein complement(289490..289627) Methylophaga nitratireducenticrescens 12846980 YP_006294781.1 CDS Q7A_278 NC_017857.1 289677 290510 D TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter 289677..290510 Methylophaga nitratireducenticrescens 12846981 YP_006294782.1 CDS Q7A_279 NC_017857.1 290517 293681 D PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 290517..293681 Methylophaga nitratireducenticrescens 12846982 YP_006294783.1 CDS Q7A_280 NC_017857.1 293657 294154 R PFAM: Lipocalin-like domain; lipoprotein Blc complement(293657..294154) Methylophaga nitratireducenticrescens 12846983 YP_006294784.1 CDS Q7A_281 NC_017857.1 294236 294493 D PFAM: Protein of unknown function (DUF2805); TIGRFAM: TIGR03643 family protein; alcohol dehydrogenase, class IV 294236..294493 Methylophaga nitratireducenticrescens 12846984 YP_006294785.1 CDS Q7A_282 NC_017857.1 294519 294914 R PFAM: MAPEG family; hypothetical protein complement(294519..294914) Methylophaga nitratireducenticrescens 12846985 YP_006294786.1 CDS Q7A_283 NC_017857.1 294972 295982 R PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I complement(294972..295982) Methylophaga nitratireducenticrescens 12846986 YP_006294787.1 CDS Q7A_284 NC_017857.1 296142 296957 R PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; formylmethanofuran dehydrogenase complement(296142..296957) Methylophaga nitratireducenticrescens 12846987 YP_006294788.1 CDS Q7A_285 NC_017857.1 296954 297856 R PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase; formylmethanofuran--tetrahydromethanopterin N-formyltransferase complement(296954..297856) Methylophaga nitratireducenticrescens 12846988 YP_006294789.1 CDS Q7A_286 NC_017857.1 297853 299520 R PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A complement(297853..299520) Methylophaga nitratireducenticrescens 12846989 YP_006294790.1 CDS Q7A_287 NC_017857.1 299533 300807 R TIGRFAM: formylmethanofuran dehydrogenase subunit B; formylmethanofuran dehydrogenase subunit B complement(299533..300807) Methylophaga nitratireducenticrescens 12846990 YP_006294791.1 CDS Q7A_288 NC_017857.1 300775 300921 D hypothetical protein 300775..300921 Methylophaga nitratireducenticrescens 12846991 YP_006294792.1 CDS Q7A_289 NC_017857.1 300901 301446 R PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; hypothetical protein complement(300901..301446) Methylophaga nitratireducenticrescens 12846992 YP_006294793.1 CDS Q7A_290 NC_017857.1 301509 303272 R PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(301509..303272) Methylophaga nitratireducenticrescens 12846993 YP_006294794.1 CDS Q7A_291 NC_017857.1 303350 305524 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; Helicase PriA essential for oriC/DnaA-independent DNA replication complement(303350..305524) Methylophaga nitratireducenticrescens 12846994 YP_006294795.1 CDS Q7A_292 NC_017857.1 305770 307383 R PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Sodium-dependent phosphate transporter complement(305770..307383) Methylophaga nitratireducenticrescens 12846995 YP_006294796.1 CDS Q7A_293 NC_017857.1 307482 307967 D PFAM: Dihydrofolate reductase; dihydrofolate reductase 307482..307967 Methylophaga nitratireducenticrescens 12846996 YP_006294797.1 CDS Q7A_294 NC_017857.1 307964 308200 R PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein; hypothetical protein complement(307964..308200) Methylophaga nitratireducenticrescens 12846997 YP_006294798.1 CDS Q7A_295 NC_017857.1 308603 308851 D hypothetical protein 308603..308851 Methylophaga nitratireducenticrescens 12846998 YP_006294799.1 CDS Q7A_296 NC_017857.1 308863 309207 D PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat domain-containing protein 308863..309207 Methylophaga nitratireducenticrescens 12846999 YP_006294800.1 CDS Q7A_297 NC_017857.1 309211 309954 R PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; twin-arginine translocation protein complement(309211..309954) Methylophaga nitratireducenticrescens 12847000 YP_006294801.1 CDS Q7A_298 NC_017857.1 309944 310264 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB; twin-arginine translocation protein TatB complement(309944..310264) Methylophaga nitratireducenticrescens 12847001 YP_006294802.1 CDS Q7A_299 NC_017857.1 310270 310515 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein TatA complement(310270..310515) Methylophaga nitratireducenticrescens 12847002 YP_006294803.1 CDS Q7A_300 NC_017857.1 310525 310863 R PFAM: Scavenger mRNA decapping enzyme C-term binding; hypothetical protein complement(310525..310863) Methylophaga nitratireducenticrescens 12847003 YP_006294804.1 CDS Q7A_301 NC_017857.1 310860 311180 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase complement(310860..311180) Methylophaga nitratireducenticrescens 12847004 YP_006294805.1 CDS Q7A_302 NC_017857.1 311177 311560 R PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(311177..311560) Methylophaga nitratireducenticrescens 12847005 YP_006294806.1 CDS Q7A_303 NC_017857.1 311557 312330 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(311557..312330) Methylophaga nitratireducenticrescens 12847006 YP_006294807.1 CDS Q7A_304 NC_017857.1 312336 313085 R PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(312336..313085) Methylophaga nitratireducenticrescens 12847007 YP_006294808.1 CDS Q7A_305 NC_017857.1 313111 313746 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Imidazole glycerol phosphate synthase amidotransferase subunit complement(313111..313746) Methylophaga nitratireducenticrescens 12847008 YP_006294809.1 CDS Q7A_306 NC_017857.1 313794 314387 R PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(313794..314387) Methylophaga nitratireducenticrescens 12847009 YP_006294810.1 CDS Q7A_307 NC_017857.1 314485 315234 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; transcriptional regulator Anr 314485..315234 Methylophaga nitratireducenticrescens 12847010 YP_006294811.1 CDS Q7A_308 NC_017857.1 315616 315738 D PFAM: OmpW family; outer membrane protein W 315616..315738 Methylophaga nitratireducenticrescens 12847011 YP_006294812.1 CDS Q7A_309 NC_017857.1 315735 315953 D PFAM: OmpW family; outer membrane protein W 315735..315953 Methylophaga nitratireducenticrescens 12847012 YP_006294813.1 CDS Q7A_310 NC_017857.1 316058 317602 R PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; peptidoglycan lipid II flippase MurJ complement(316058..317602) Methylophaga nitratireducenticrescens 12847013 YP_006294814.1 CDS Q7A_311 NC_017857.1 317655 318275 D hypothetical protein 317655..318275 Methylophaga nitratireducenticrescens 12847014 YP_006294815.1 CDS Q7A_312 NC_017857.1 318272 319183 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; hydrogen peroxide-inducible genes activator complement(318272..319183) Methylophaga nitratireducenticrescens 12847015 YP_006294816.1 CDS Q7A_313 NC_017857.1 319324 319488 D PFAM: Rubredoxin; Rubredoxin 319324..319488 Methylophaga nitratireducenticrescens 12847016 YP_006294817.1 CDS Q7A_314 NC_017857.1 319583 320659 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA recombination and repair protein RecF 319583..320659 Methylophaga nitratireducenticrescens 12847017 YP_006294818.1 CDS Q7A_315 NC_017857.1 320732 323146 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 320732..323146 Methylophaga nitratireducenticrescens 12847018 YP_006294819.1 CDS Q7A_316 NC_017857.1 323542 324858 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase complement(323542..324858) Methylophaga nitratireducenticrescens 12847019 YP_006294820.1 CDS Q7A_317 NC_017857.1 325068 325556 D PFAM: Flavoprotein; flavoprotein 325068..325556 Methylophaga nitratireducenticrescens 12847020 YP_006294821.1 CDS Q7A_318 NC_017857.1 325549 326976 D PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein; dihydropteroate synthase-like protein 325549..326976 Methylophaga nitratireducenticrescens 12847021 YP_006294822.1 CDS Q7A_319 NC_017857.1 326990 327574 D PFAM: Protein of unknown function (DUF447); hypothetical protein 326990..327574 Methylophaga nitratireducenticrescens 12847022 YP_006294823.1 CDS Q7A_320 NC_017857.1 327759 328271 D PFAM: Protein of unknown function (DUF556); hypothetical protein 327759..328271 Methylophaga nitratireducenticrescens 12847023 YP_006294824.1 CDS Q7A_321 NC_017857.1 328331 330610 R PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(328331..330610) Methylophaga nitratireducenticrescens 12847024 YP_006294825.1 CDS Q7A_322 NC_017857.1 330711 331607 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional activator MetR 330711..331607 Methylophaga nitratireducenticrescens 12847025 YP_006294826.1 CDS Q7A_323 NC_017857.1 331604 332407 R PFAM: Response regulator receiver domain; chemotaxis regulator complement(331604..332407) Methylophaga nitratireducenticrescens 12847026 YP_006294827.1 CDS Q7A_324 NC_017857.1 332420 332974 R PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; hypothetical protein complement(332420..332974) Methylophaga nitratireducenticrescens 12847027 YP_006294828.1 CDS Q7A_325 NC_017857.1 332984 334315 R PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Carboxyl-terminal protease complement(332984..334315) Methylophaga nitratireducenticrescens 12847028 YP_006294829.1 CDS Q7A_326 NC_017857.1 334340 335449 R PFAM: Peptidase family M23; murein hydrolase complement(334340..335449) Methylophaga nitratireducenticrescens 12847029 YP_006294830.1 CDS Q7A_327 NC_017857.1 335497 337029 R PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(335497..337029) Methylophaga nitratireducenticrescens 12847030 YP_006294831.1 CDS Q7A_328 NC_017857.1 337188 337478 D transcriptional regulator 337188..337478 Methylophaga nitratireducenticrescens 12847031 YP_006294832.1 CDS Q7A_329 NC_017857.1 337514 337933 D PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase 337514..337933 Methylophaga nitratireducenticrescens 12847032 YP_006294833.1 CDS Q7A_330 NC_017857.1 337950 338207 D PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; glutaredoxin 3 (Grx3) 337950..338207 Methylophaga nitratireducenticrescens 12847033 YP_006294834.1 CDS Q7A_331 NC_017857.1 338230 338712 D PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; protein export cytoplasm chaperone protein 338230..338712 Methylophaga nitratireducenticrescens 12847034 YP_006294835.1 CDS Q7A_332 NC_017857.1 338722 339756 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase 338722..339756 Methylophaga nitratireducenticrescens 12847035 YP_006294836.1 CDS Q7A_333 NC_017857.1 339781 340656 D hypothetical protein 339781..340656 Methylophaga nitratireducenticrescens 12847036 YP_006294837.1 CDS Q7A_334 NC_017857.1 340710 341873 R PFAM: Uncharacterized ACR, COG1565; hypothetical protein complement(340710..341873) Methylophaga nitratireducenticrescens 12847037 YP_006294838.1 CDS Q7A_335 NC_017857.1 341890 342609 D PFAM: short chain dehydrogenase; folM Alternative dihydrofolate reductase 1 341890..342609 Methylophaga nitratireducenticrescens 12847038 YP_006294839.1 CDS Q7A_336 NC_017857.1 343065 343418 R PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase complement(343065..343418) Methylophaga nitratireducenticrescens 12847039 YP_006294840.1 CDS Q7A_337 NC_017857.1 343400 343528 R hypothetical protein complement(343400..343528) Methylophaga nitratireducenticrescens 12847040 YP_006294841.1 CDS Q7A_338 NC_017857.1 343495 344091 D PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate:glycerol-3-phosphate O-acyltransferase 343495..344091 Methylophaga nitratireducenticrescens 12847041 YP_006294842.1 CDS Q7A_339 NC_017857.1 344083 345099 R PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; hypothetical protein complement(344083..345099) Methylophaga nitratireducenticrescens 12847042 YP_006294843.1 CDS Q7A_340 NC_017857.1 345252 345467 D PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 345252..345467 Methylophaga nitratireducenticrescens 12847043 YP_006294844.1 CDS Q7A_341 NC_017857.1 345491 345952 D PFAM: Yqey-like protein; transamidase GatB domain-containing protein 345491..345952 Methylophaga nitratireducenticrescens 12847044 YP_006294845.1 CDS Q7A_342 NC_017857.1 346021 347745 D PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase 346021..347745 Methylophaga nitratireducenticrescens 12847045 YP_006294846.1 CDS Q7A_343 NC_017857.1 347841 349679 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma factor RpoD 347841..349679 Methylophaga nitratireducenticrescens 12847046 YP_006294847.1 CDS Q7A_345 NC_017857.1 349773 350918 R PFAM: Phage integrase family; site-specific recombinase XerD complement(349773..350918) Methylophaga nitratireducenticrescens 12847048 YP_006294848.1 CDS Q7A_346 NC_017857.1 351547 352245 D hypothetical protein 351547..352245 Methylophaga nitratireducenticrescens 12847049 YP_006294849.1 CDS Q7A_347 NC_017857.1 352415 352780 D PFAM: Bacterial mobilisation protein (MobC); mobilization protein MobC 352415..352780 Methylophaga nitratireducenticrescens 12847050 YP_006294850.1 CDS Q7A_348 NC_017857.1 352761 354566 D PFAM: Relaxase/Mobilisation nuclease domain; relaxase/mobilization nuclease 352761..354566 Methylophaga nitratireducenticrescens 12847051 YP_006294851.1 CDS Q7A_349 NC_017857.1 354581 354928 R hypothetical protein complement(354581..354928) Methylophaga nitratireducenticrescens 12847052 YP_006294852.1 CDS Q7A_350 NC_017857.1 354988 356103 R PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent Lon protase complement(354988..356103) Methylophaga nitratireducenticrescens 12847053 YP_006294853.1 CDS Q7A_351 NC_017857.1 356137 356556 R PFAM: LAGLIDADG endonuclease; LAGLIDADG endonuclease complement(356137..356556) Methylophaga nitratireducenticrescens 12847054 YP_006294854.1 CDS Q7A_352 NC_017857.1 356725 356955 R transcriptional regulator complement(356725..356955) Methylophaga nitratireducenticrescens 12847055 YP_006294855.1 CDS Q7A_353 NC_017857.1 357177 357317 R hypothetical protein complement(357177..357317) Methylophaga nitratireducenticrescens 12847056 YP_006294856.1 CDS Q7A_354 NC_017857.1 357359 357475 D hypothetical protein 357359..357475 Methylophaga nitratireducenticrescens 12847057 YP_006294857.1 CDS Q7A_355 NC_017857.1 357437 358567 R multidrug ABC transporter permease complement(357437..358567) Methylophaga nitratireducenticrescens 12847058 YP_006294858.1 CDS Q7A_356 NC_017857.1 358569 361262 R PFAM: ABC transporter; multidrug ABC transporter permease complement(358569..361262) Methylophaga nitratireducenticrescens 12847059 YP_006294859.1 CDS Q7A_357 NC_017857.1 361335 362414 R PFAM: HlyD family secretion protein; secretion protein complement(361335..362414) Methylophaga nitratireducenticrescens 12847060 YP_006294860.1 CDS Q7A_358 NC_017857.1 362429 363916 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC complement(362429..363916) Methylophaga nitratireducenticrescens 12847061 YP_006294861.1 CDS Q7A_359 NC_017857.1 364395 365033 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 364395..365033 Methylophaga nitratireducenticrescens 12847062 YP_006294862.1 CDS Q7A_360 NC_017857.1 365056 365301 D hypothetical protein 365056..365301 Methylophaga nitratireducenticrescens 12847063 YP_006294863.1 CDS Q7A_361 NC_017857.1 365282 366073 D hypothetical protein 365282..366073 Methylophaga nitratireducenticrescens 12847064 YP_006294864.1 CDS Q7A_362 NC_017857.1 366070 368019 D hypothetical protein 366070..368019 Methylophaga nitratireducenticrescens 12847065 YP_006294865.1 CDS Q7A_363 NC_017857.1 368024 368200 D hypothetical protein 368024..368200 Methylophaga nitratireducenticrescens 12847066 YP_006294866.1 CDS Q7A_364 NC_017857.1 368318 368470 R hypothetical protein complement(368318..368470) Methylophaga nitratireducenticrescens 12847067 YP_006294867.1 CDS Q7A_365 NC_017857.1 369126 369875 D hypothetical protein 369126..369875 Methylophaga nitratireducenticrescens 12847068 YP_006294868.1 CDS Q7A_366 NC_017857.1 370052 370900 R PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase complement(370052..370900) Methylophaga nitratireducenticrescens 12847069 YP_006294869.1 CDS Q7A_367 NC_017857.1 370945 371949 R PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I complement(370945..371949) Methylophaga nitratireducenticrescens 12847070 YP_006294870.1 CDS Q7A_368 NC_017857.1 372030 373085 R PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; fructose-bisphosphate aldolase class II complement(372030..373085) Methylophaga nitratireducenticrescens 12847071 YP_006294871.1 CDS Q7A_369 NC_017857.1 373607 374128 R ankyrin domain-containing protein complement(373607..374128) Methylophaga nitratireducenticrescens 12847072 YP_006294872.1 CDS Q7A_370 NC_017857.1 374304 374477 D PFAM: Uncharacterized protein family UPF0057; hypothetical protein 374304..374477 Methylophaga nitratireducenticrescens 12847073 YP_006294873.1 CDS Q7A_371 NC_017857.1 374571 374711 R PFAM: Entericidin EcnA/B family; small secreted protein complement(374571..374711) Methylophaga nitratireducenticrescens 12847074 YP_006294874.1 CDS Q7A_372 NC_017857.1 374789 374926 D hypothetical protein 374789..374926 Methylophaga nitratireducenticrescens 12847075 YP_006294875.1 CDS Q7A_373 NC_017857.1 375241 375627 D PFAM: FecR protein; FecR protein 375241..375627 Methylophaga nitratireducenticrescens 12847076 YP_006294876.1 CDS Q7A_374 NC_017857.1 375624 376193 D PFAM: OmpA family; outer membrane protein A precursor 375624..376193 Methylophaga nitratireducenticrescens 12847077 YP_006294877.1 CDS Q7A_375 NC_017857.1 376209 377555 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; Agglutination protein 376209..377555 Methylophaga nitratireducenticrescens 12847078 YP_006294878.1 CDS Q7A_380 NC_017857.1 380118 380612 D PFAM: Redoxin; thiol peroxidase 380118..380612 Methylophaga nitratireducenticrescens 12847080 YP_006294879.1 CDS Q7A_381 NC_017857.1 380781 381428 D hypothetical protein 380781..381428 Methylophaga nitratireducenticrescens 12847081 YP_006294880.1 CDS Q7A_382 NC_017857.1 381552 382016 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; Isoquinoline 1-oxidoreductase subunit alpha 381552..382016 Methylophaga nitratireducenticrescens 12847082 YP_006294881.1 CDS Q7A_383 NC_017857.1 382013 384331 D PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Isoquinoline 1-oxidoreductase beta subunit 382013..384331 Methylophaga nitratireducenticrescens 12847083 YP_006294882.1 CDS Q7A_384 NC_017857.1 384334 385329 D PFAM: XdhC and CoxI family; Xanthine and CO dehydrogenases maturation factor 384334..385329 Methylophaga nitratireducenticrescens 12847084 YP_006294883.1 CDS Q7A_385 NC_017857.1 385342 385956 D CTP:molybdopterin cytidylyltransferase 385342..385956 Methylophaga nitratireducenticrescens 12847085 YP_006294884.1 CDS Q7A_388 NC_017857.1 386964 387128 R PFAM: Protein of unknown function (DUF1328); hypothetical protein complement(386964..387128) Methylophaga nitratireducenticrescens 12847087 YP_006294885.1 CDS Q7A_389 NC_017857.1 387322 387507 D hypothetical protein 387322..387507 Methylophaga nitratireducenticrescens 12847088 YP_006294886.1 CDS Q7A_390 NC_017857.1 387589 387861 D PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 387589..387861 Methylophaga nitratireducenticrescens 12847089 YP_006294887.1 CDS Q7A_391 NC_017857.1 387901 388335 D PFAM: Protein of unknown function (DUF1469); hypothetical protein 387901..388335 Methylophaga nitratireducenticrescens 12847090 YP_006294888.1 CDS Q7A_392 NC_017857.1 388412 388768 D hypothetical protein 388412..388768 Methylophaga nitratireducenticrescens 12847091 YP_006294889.1 CDS Q7A_393 NC_017857.1 388811 389002 D hypothetical protein 388811..389002 Methylophaga nitratireducenticrescens 12847092 YP_006294890.1 CDS Q7A_394 NC_017857.1 389127 390515 D PFAM: Sodium:solute symporter family; twin-arginine translocation pathway signal 389127..390515 Methylophaga nitratireducenticrescens 12847093 YP_006294891.1 CDS Q7A_395 NC_017857.1 390541 390801 D hypothetical protein 390541..390801 Methylophaga nitratireducenticrescens 12847094 YP_006294892.1 CDS Q7A_396 NC_017857.1 390912 391154 D hypothetical protein 390912..391154 Methylophaga nitratireducenticrescens 12847095 YP_006294893.1 CDS Q7A_397 NC_017857.1 391224 392519 D PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein 391224..392519 Methylophaga nitratireducenticrescens 12847096 YP_006294894.1 CDS Q7A_398 NC_017857.1 392524 393750 D Co/Zn/Cd efflux system membrane fusion protein 392524..393750 Methylophaga nitratireducenticrescens 12847097 YP_006294895.1 CDS Q7A_399 NC_017857.1 393760 396882 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA 393760..396882 Methylophaga nitratireducenticrescens 12847098 YP_006294896.1 CDS Q7A_400 NC_017857.1 396960 397337 R hypothetical protein complement(396960..397337) Methylophaga nitratireducenticrescens 12847099 YP_006294897.1 CDS Q7A_401 NC_017857.1 397543 399003 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor signal transduction histidine kinase 397543..399003 Methylophaga nitratireducenticrescens 12847100 YP_006294898.1 CDS Q7A_402 NC_017857.1 399000 400427 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component transcriptional regulator 399000..400427 Methylophaga nitratireducenticrescens 12847101 YP_006294899.1 CDS Q7A_403 NC_017857.1 400424 401557 R PFAM: KWG Leptospira; KWG repeat-containing protein complement(400424..401557) Methylophaga nitratireducenticrescens 12847102 YP_006294900.1 CDS Q7A_404 NC_017857.1 401834 403189 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, plant; glutathione-disulfide reductase, animal/bacterial; glutathione reductase complement(401834..403189) Methylophaga nitratireducenticrescens 12847103 YP_006294901.1 CDS Q7A_405 NC_017857.1 403277 403801 R PFAM: Redoxin; peroxiredoxin family protein/glutaredoxin complement(403277..403801) Methylophaga nitratireducenticrescens 12847104 YP_006294902.1 CDS Q7A_406 NC_017857.1 403924 406041 R PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; hypothetical protein complement(403924..406041) Methylophaga nitratireducenticrescens 12847105 YP_006294903.1 CDS Q7A_407 NC_017857.1 406134 409097 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase complement(406134..409097) Methylophaga nitratireducenticrescens 12847106 YP_006294904.1 CDS Q7A_408 NC_017857.1 409248 409808 R PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase complement(409248..409808) Methylophaga nitratireducenticrescens 12847107 YP_006294905.1 CDS Q7A_409 NC_017857.1 409805 410245 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR complement(409805..410245) Methylophaga nitratireducenticrescens 12847108 YP_006294906.1 CDS Q7A_410 NC_017857.1 410332 411564 D PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; flavohemoprotein 410332..411564 Methylophaga nitratireducenticrescens 12847109 YP_006294907.1 CDS Q7A_411 NC_017857.1 411749 412066 D PFAM: Peptidase propeptide and YPEB domain; hypothetical protein 411749..412066 Methylophaga nitratireducenticrescens 12847110 YP_006294908.1 CDS Q7A_412 NC_017857.1 412376 413701 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ complement(412376..413701) Methylophaga nitratireducenticrescens 12847111 YP_006294909.1 CDS Q7A_413 NC_017857.1 413698 414360 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system response regulator QseB complement(413698..414360) Methylophaga nitratireducenticrescens 12847112 YP_006294910.1 CDS Q7A_414 NC_017857.1 414363 414683 R PFAM: Peptidase propeptide and YPEB domain; hypothetical protein complement(414363..414683) Methylophaga nitratireducenticrescens 12847113 YP_006294911.1 CDS Q7A_415 NC_017857.1 415120 416301 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 415120..416301 Methylophaga nitratireducenticrescens 12847114 YP_006294912.1 CDS Q7A_416 NC_017857.1 416441 417898 D PFAM: Catalase; Catalase-related immune-responsive; catalase 416441..417898 Methylophaga nitratireducenticrescens 12847115 YP_006294913.1 CDS Q7A_417 NC_017857.1 417964 418434 D PFAM: Ferritin-like domain; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase 417964..418434 Methylophaga nitratireducenticrescens 12847116 YP_006294914.1 CDS Q7A_418 NC_017857.1 418846 420297 R PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(418846..420297) Methylophaga nitratireducenticrescens 12847117 YP_006294915.1 CDS Q7A_419 NC_017857.1 420307 421947 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-requiring enzyme complement(420307..421947) Methylophaga nitratireducenticrescens 12847118 YP_006294916.1 CDS Q7A_420 NC_017857.1 422034 422915 R PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB complement(422034..422915) Methylophaga nitratireducenticrescens 12847119 YP_006294917.1 CDS Q7A_421 NC_017857.1 422869 423006 R hypothetical protein complement(422869..423006) Methylophaga nitratireducenticrescens 12847120 YP_006294918.1 CDS Q7A_422 NC_017857.1 423090 426044 D PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 423090..426044 Methylophaga nitratireducenticrescens 12847121 YP_006294919.1 CDS Q7A_423 NC_017857.1 426475 427785 D PFAM: Sodium:neurotransmitter symporter family; sodium-dependent transporter 426475..427785 Methylophaga nitratireducenticrescens 12847122 YP_006294920.1 CDS Q7A_424 NC_017857.1 427782 427922 D hypothetical protein 427782..427922 Methylophaga nitratireducenticrescens 12847123 YP_006294921.1 CDS Q7A_425 NC_017857.1 427915 430032 D PFAM: SNARE associated Golgi protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 427915..430032 Methylophaga nitratireducenticrescens 12847124 YP_006294922.1 CDS Q7A_426 NC_017857.1 430002 430736 D PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/Exonuclease/phosphatase 430002..430736 Methylophaga nitratireducenticrescens 12847125 YP_006294923.1 CDS Q7A_427 NC_017857.1 430800 430958 D hypothetical protein 430800..430958 Methylophaga nitratireducenticrescens 12847126 YP_006294924.1 CDS Q7A_428 NC_017857.1 430974 433928 D PFAM: Domain of Unknown Function (DUF748); hypothetical protein 430974..433928 Methylophaga nitratireducenticrescens 12847127 YP_006294925.1 CDS Q7A_429 NC_017857.1 434446 434565 D hypothetical protein 434446..434565 Methylophaga nitratireducenticrescens 12847128 YP_006294926.1 CDS Q7A_430 NC_017857.1 434688 434873 D IS982 family; transposase 434688..434873 Methylophaga nitratireducenticrescens 12847129 YP_006294927.1 CDS Q7A_431 NC_017857.1 434842 435615 R PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; nitric oxide reductase activation protein NorQ complement(434842..435615) Methylophaga nitratireducenticrescens 12847130 YP_006294928.1 CDS Q7A_432 NC_017857.1 435634 437505 R PFAM: von Willebrand factor type A domain; nitric oxide reductase activation protein NorD complement(435634..437505) Methylophaga nitratireducenticrescens 12847131 YP_006294929.1 CDS Q7A_433 NC_017857.1 437526 438938 R PFAM: Cytochrome C and Quinol oxidase polypeptide I; nitric-oxide reductase subunit B complement(437526..438938) Methylophaga nitratireducenticrescens 12847132 YP_006294930.1 CDS Q7A_434 NC_017857.1 438955 439404 R PFAM: Cytochrome c; nitric-oxide reductase subunit C complement(438955..439404) Methylophaga nitratireducenticrescens 12847133 YP_006294931.1 CDS Q7A_435 NC_017857.1 439689 441245 D PFAM: GAF domain; Sigma-54 interaction domain; Anaerobic nitric oxide reductase transcription regulator NorR 439689..441245 Methylophaga nitratireducenticrescens 12847134 YP_006294932.1 CDS Q7A_436 NC_017857.1 441274 441849 D PFAM: Cytochrome c oxidase subunit III; nitric oxide reductase activation protein NorE 441274..441849 Methylophaga nitratireducenticrescens 12847135 YP_006294933.1 CDS Q7A_437 NC_017857.1 441871 442098 D hypothetical protein 441871..442098 Methylophaga nitratireducenticrescens 12847136 YP_006294934.1 CDS Q7A_438 NC_017857.1 442217 443437 R PFAM: NnrS protein; NnrS-like protein complement(442217..443437) Methylophaga nitratireducenticrescens 12847137 YP_006294935.1 CDS Q7A_439 NC_017857.1 443931 444938 R PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein MoaA complement(443931..444938) Methylophaga nitratireducenticrescens 12847138 YP_006294936.1 CDS Q7A_440 NC_017857.1 445052 445333 R PFAM: DGC domain; hypothetical protein complement(445052..445333) Methylophaga nitratireducenticrescens 12847139 YP_006294937.1 CDS Q7A_441 NC_017857.1 446235 448157 D PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; nitrate/nitrite sensor protein 446235..448157 Methylophaga nitratireducenticrescens 12847140 YP_006294938.1 CDS Q7A_442 NC_017857.1 448154 448816 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; nitrate/nitrite response regulator protein 448154..448816 Methylophaga nitratireducenticrescens 12847141 YP_006294939.1 CDS Q7A_443 NC_017857.1 448966 449088 R hypothetical protein complement(448966..449088) Methylophaga nitratireducenticrescens 12847142 YP_006294940.1 CDS Q7A_444 NC_017857.1 449478 450743 D PFAM: Major Facilitator Superfamily; nitrate/nitrite transporter 449478..450743 Methylophaga nitratireducenticrescens 12847143 YP_006294941.1 CDS Q7A_445 NC_017857.1 450756 452366 D PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter 450756..452366 Methylophaga nitratireducenticrescens 12847144 YP_006294942.1 CDS Q7A_446 NC_017857.1 452407 456162 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; respiratory nitrate reductase subunit alpha 452407..456162 Methylophaga nitratireducenticrescens 12847145 YP_006294943.1 CDS Q7A_447 NC_017857.1 456194 457738 D TIGRFAM: nitrate reductase, beta subunit; respiratory nitrate reductase subunit beta 456194..457738 Methylophaga nitratireducenticrescens 12847146 YP_006294944.1 CDS Q7A_448 NC_017857.1 457751 458281 D PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; respiratory nitrate reductase subunit delta 457751..458281 Methylophaga nitratireducenticrescens 12847147 YP_006294945.1 CDS Q7A_449 NC_017857.1 458281 458976 D PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma 458281..458976 Methylophaga nitratireducenticrescens 12847148 YP_006294946.1 CDS Q7A_450 NC_017857.1 458993 459679 D PFAM: Carbonic anhydrase; carbonic anhydrase 458993..459679 Methylophaga nitratireducenticrescens 12847149 YP_006294947.1 CDS Q7A_451 NC_017857.1 459781 461007 D hypothetical protein 459781..461007 Methylophaga nitratireducenticrescens 12847150 YP_006294948.1 CDS Q7A_452 NC_017857.1 461907 462185 D PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D 461907..462185 Methylophaga nitratireducenticrescens 12847151 YP_006294949.1 CDS Q7A_453 NC_017857.1 462154 463314 D PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E 462154..463314 Methylophaga nitratireducenticrescens 12847152 YP_006294950.1 CDS Q7A_454 NC_017857.1 463499 463927 D PFAM: Protein of unknown function (DUF989); hypothetical protein 463499..463927 Methylophaga nitratireducenticrescens 12847153 YP_006294951.1 CDS Q7A_455 NC_017857.1 463944 465044 D PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 463944..465044 Methylophaga nitratireducenticrescens 12847154 YP_006294952.1 CDS Q7A_456 NC_017857.1 465177 465932 D PFAM: Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 465177..465932 Methylophaga nitratireducenticrescens 12847155 YP_006294953.1 CDS Q7A_457 NC_017857.1 465958 466806 D PFAM: Transposase DDE domain; ISSod6 transposase, IS1301 465958..466806 Methylophaga nitratireducenticrescens 12847156 YP_006294954.1 CDS Q7A_458 NC_017857.1 467068 469230 D PFAM: FMN-binding domain; nitrous oxide reductase maturation protein NosR 467068..469230 Methylophaga nitratireducenticrescens 12847157 YP_006294955.1 CDS Q7A_461 NC_017857.1 471272 472561 D PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); nitrous oxide reductase maturation protein NosD 471272..472561 Methylophaga nitratireducenticrescens 12847159 YP_006294956.1 CDS Q7A_462 NC_017857.1 472558 473457 D PFAM: ABC transporter; nitrous oxide reductase maturation protein NosF (ATPase) 472558..473457 Methylophaga nitratireducenticrescens 12847160 YP_006294957.1 CDS Q7A_463 NC_017857.1 473457 474287 D nitrous oxide reductase maturation transmembrane protein NosY 473457..474287 Methylophaga nitratireducenticrescens 12847161 YP_006294958.1 CDS Q7A_464 NC_017857.1 474284 474796 D PFAM: NosL; nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL 474284..474796 Methylophaga nitratireducenticrescens 12847162 YP_006294959.1 CDS Q7A_465 NC_017857.1 475610 477658 D PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleotide reductase of class III (anaerobic), large subunit 475610..477658 Methylophaga nitratireducenticrescens 12847163 YP_006294960.1 CDS Q7A_466 NC_017857.1 477684 477854 D hypothetical protein 477684..477854 Methylophaga nitratireducenticrescens 12847164 YP_006294961.1 CDS Q7A_467 NC_017857.1 477876 478556 D PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; ribonucleotide reductase of class III (anaerobic), activating protein 477876..478556 Methylophaga nitratireducenticrescens 12847165 YP_006294962.1 CDS Q7A_468 NC_017857.1 478706 479593 D PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; pyridoxine biosynthesis glutamine amidotransferase, synthase subunit 478706..479593 Methylophaga nitratireducenticrescens 12847166 YP_006294963.1 CDS Q7A_469 NC_017857.1 479594 480160 D PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit 479594..480160 Methylophaga nitratireducenticrescens 12847167 YP_006294964.1 CDS Q7A_470 NC_017857.1 480179 480715 D PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin biosynthesis Mog protein, molybdochelatase 480179..480715 Methylophaga nitratireducenticrescens 12847168 YP_006294965.1 CDS Q7A_471 NC_017857.1 480737 481252 R PFAM: SCP-2 sterol transfer family; lipid carrier protein complement(480737..481252) Methylophaga nitratireducenticrescens 12847169 YP_006294966.1 CDS Q7A_472 NC_017857.1 481411 482406 D PFAM: Peptidase family U32; FIG139552; protease 481411..482406 Methylophaga nitratireducenticrescens 12847170 YP_006294967.1 CDS Q7A_473 NC_017857.1 482444 483349 D PFAM: Peptidase family U32; protease 482444..483349 Methylophaga nitratireducenticrescens 12847171 YP_006294968.1 CDS Q7A_474 NC_017857.1 483467 483724 R Copper-containing nitrite reductase complement(483467..483724) Methylophaga nitratireducenticrescens 12847172 YP_006294969.1 CDS Q7A_475 NC_017857.1 484116 484256 D hypothetical protein 484116..484256 Methylophaga nitratireducenticrescens 12847173 YP_006294970.1 CDS Q7A_476 NC_017857.1 484327 484506 R hypothetical protein complement(484327..484506) Methylophaga nitratireducenticrescens 12847174 YP_006294971.1 CDS Q7A_477 NC_017857.1 484466 485197 D hypothetical protein 484466..485197 Methylophaga nitratireducenticrescens 12847175 YP_006294972.1 CDS Q7A_478 NC_017857.1 485203 485646 R copper export protein complement(485203..485646) Methylophaga nitratireducenticrescens 12847176 YP_006294973.1 CDS Q7A_479 NC_017857.1 485678 488329 R PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter complement(485678..488329) Methylophaga nitratireducenticrescens 12847177 YP_006294974.1 CDS Q7A_480 NC_017857.1 488348 489106 R PFAM: PPIC-type PPIASE domain; Parvulin-like peptidyl-prolyl isomerase complement(488348..489106) Methylophaga nitratireducenticrescens 12847178 YP_006294975.1 CDS Q7A_481 NC_017857.1 489124 489813 R PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma complement(489124..489813) Methylophaga nitratireducenticrescens 12847179 YP_006294976.1 CDS Q7A_482 NC_017857.1 489849 490547 R PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; respiratory nitrate reductase subunit delta complement(489849..490547) Methylophaga nitratireducenticrescens 12847180 YP_006294977.1 CDS Q7A_483 NC_017857.1 490550 492088 R TIGRFAM: nitrate reductase, beta subunit; respiratory nitrate reductase subunit beta complement(490550..492088) Methylophaga nitratireducenticrescens 12847181 YP_006294978.1 CDS Q7A_484 NC_017857.1 492085 495828 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; respiratory nitrate reductase subunit alpha complement(492085..495828) Methylophaga nitratireducenticrescens 12847182 YP_006294979.1 CDS Q7A_485 NC_017857.1 496183 498231 R PFAM: von Willebrand factor type A domain; nitric oxide reductase activation protein NorD complement(496183..498231) Methylophaga nitratireducenticrescens 12847183 YP_006294980.1 CDS Q7A_486 NC_017857.1 498264 499082 R PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; ATPase complement(498264..499082) Methylophaga nitratireducenticrescens 12847184 YP_006294981.1 CDS Q7A_487 NC_017857.1 499079 500440 R PFAM: Cytochrome C and Quinol oxidase polypeptide I; nitric-oxide reductase subunit B complement(499079..500440) Methylophaga nitratireducenticrescens 12847185 YP_006294982.1 CDS Q7A_488 NC_017857.1 500501 501331 R PFAM: Cytochrome c; nitric-oxide reductase subunit C complement(500501..501331) Methylophaga nitratireducenticrescens 12847186 YP_006294983.1 CDS Q7A_489 NC_017857.1 501346 501471 R hypothetical protein complement(501346..501471) Methylophaga nitratireducenticrescens 12847187 YP_006294984.1 CDS Q7A_490 NC_017857.1 502346 502771 R hypothetical protein complement(502346..502771) Methylophaga nitratireducenticrescens 12847188 YP_006294985.1 CDS Q7A_492 NC_017857.1 503995 504123 R hypothetical protein complement(503995..504123) Methylophaga nitratireducenticrescens 12845518 YP_006294986.1 CDS Q7A_493 NC_017857.1 504322 505695 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase complement(504322..505695) Methylophaga nitratireducenticrescens 12845519 YP_006294987.1 CDS Q7A_494 NC_017857.1 505776 506447 R PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; hypothetical protein complement(505776..506447) Methylophaga nitratireducenticrescens 12845520 YP_006294988.1 CDS Q7A_495 NC_017857.1 506625 507917 D PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Phosphoribosylamine--glycine ligase 506625..507917 Methylophaga nitratireducenticrescens 12845521 YP_006294989.1 CDS Q7A_496 NC_017857.1 507946 508818 D PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase 507946..508818 Methylophaga nitratireducenticrescens 12845522 YP_006294990.1 CDS Q7A_497 NC_017857.1 508852 509406 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; hypothetical protein 508852..509406 Methylophaga nitratireducenticrescens 12845523 YP_006294991.1 CDS Q7A_498 NC_017857.1 509403 510329 D PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase 509403..510329 Methylophaga nitratireducenticrescens 12845524 YP_006294992.1 CDS Q7A_499 NC_017857.1 510572 511660 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 complement(510572..511660) Methylophaga nitratireducenticrescens 12845525 YP_006294993.1 CDS Q7A_500 NC_017857.1 511664 512923 R PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(511664..512923) Methylophaga nitratireducenticrescens 12845526 YP_006294994.1 CDS Q7A_501 NC_017857.1 513046 514821 D PFAM: Tetratricopeptide repeat; hypothetical protein 513046..514821 Methylophaga nitratireducenticrescens 12845527 YP_006294995.1 CDS Q7A_502 NC_017857.1 514818 515417 D PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB precursor 514818..515417 Methylophaga nitratireducenticrescens 12845528 YP_006294996.1 CDS Q7A_503 NC_017857.1 515414 516283 D PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 515414..516283 Methylophaga nitratireducenticrescens 12845529 YP_006294997.1 CDS Q7A_505 NC_017857.1 516416 517402 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 516416..517402 Methylophaga nitratireducenticrescens 12845531 YP_006294998.1 CDS Q7A_506 NC_017857.1 517516 518190 D PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 517516..518190 Methylophaga nitratireducenticrescens 12845532 YP_006294999.1 CDS Q7A_507 NC_017857.1 518211 518783 D PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 518211..518783 Methylophaga nitratireducenticrescens 12845533 YP_006295000.1 CDS Q7A_508 NC_017857.1 518885 519976 D PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding and nucleic acid-binding protein YchF 518885..519976 Methylophaga nitratireducenticrescens 12845534 YP_006295001.1 CDS Q7A_509 NC_017857.1 520034 521101 D PFAM: Phospholipase A1; phospholipase A1 precursor 520034..521101 Methylophaga nitratireducenticrescens 12845535 YP_006295002.1 CDS Q7A_511 NC_017857.1 521407 522519 R PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein complement(521407..522519) Methylophaga nitratireducenticrescens 12845537 YP_006295003.1 CDS Q7A_512 NC_017857.1 522519 522632 R hypothetical protein complement(522519..522632) Methylophaga nitratireducenticrescens 12845538 YP_006295004.1 CDS Q7A_513 NC_017857.1 522806 523099 R PFAM: Transposase DDE domain; IS4 family transposase complement(522806..523099) Methylophaga nitratireducenticrescens 12845539 YP_006295005.1 CDS Q7A_514 NC_017857.1 523096 523569 R transposase complement(523096..523569) Methylophaga nitratireducenticrescens 12845540 YP_006295006.1 CDS Q7A_515 NC_017857.1 523734 524120 D hypothetical protein 523734..524120 Methylophaga nitratireducenticrescens 12845541 YP_006295007.1 CDS Q7A_516 NC_017857.1 524196 524621 D hypothetical protein 524196..524621 Methylophaga nitratireducenticrescens 12845542 YP_006295008.1 CDS Q7A_517 NC_017857.1 524618 525355 R hypothetical protein complement(524618..525355) Methylophaga nitratireducenticrescens 12845543 YP_006295009.1 CDS Q7A_518 NC_017857.1 525434 526417 R hypothetical protein complement(525434..526417) Methylophaga nitratireducenticrescens 12845544 YP_006295010.1 CDS Q7A_519 NC_017857.1 526603 527004 D PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 526603..527004 Methylophaga nitratireducenticrescens 12845545 YP_006295011.1 CDS Q7A_520 NC_017857.1 527062 527673 D hypothetical protein 527062..527673 Methylophaga nitratireducenticrescens 12845546 YP_006295012.1 CDS Q7A_521 NC_017857.1 527651 528601 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; RuBisCO operon transcriptional regulator CbbR complement(527651..528601) Methylophaga nitratireducenticrescens 12845547 YP_006295013.1 CDS Q7A_522 NC_017857.1 528847 530265 D PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain; ribulose bisphosphate carboxylase large subunit 528847..530265 Methylophaga nitratireducenticrescens 12845548 YP_006295014.1 CDS Q7A_523 NC_017857.1 530335 530691 D PFAM: Ribulose bisphosphate carboxylase, small chain; ribulose bisphosphate carboxylase small subunit 530335..530691 Methylophaga nitratireducenticrescens 12845549 YP_006295015.1 CDS Q7A_524 NC_017857.1 530784 531596 D PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; Rubisco activation protein CbbQ 530784..531596 Methylophaga nitratireducenticrescens 12845550 YP_006295016.1 CDS Q7A_525 NC_017857.1 531636 533978 D PFAM: von Willebrand factor type A domain; Rubisco activation protein CbbO 531636..533978 Methylophaga nitratireducenticrescens 12845551 YP_006295017.1 CDS Q7A_526 NC_017857.1 534224 534565 D hypothetical protein 534224..534565 Methylophaga nitratireducenticrescens 12845552 YP_006295018.1 CDS Q7A_527 NC_017857.1 534679 538935 R PFAM: EAL domain; GGDEF domain; NMT1/THI5 like; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(534679..538935) Methylophaga nitratireducenticrescens 12845553 YP_006295019.1 CDS Q7A_528 NC_017857.1 539025 540038 R MxaL protein complement(539025..540038) Methylophaga nitratireducenticrescens 12845554 YP_006295020.1 CDS Q7A_529 NC_017857.1 540050 540619 R MxaK protein complement(540050..540619) Methylophaga nitratireducenticrescens 12845555 YP_006295021.1 CDS Q7A_530 NC_017857.1 540619 541440 R PFAM: von Willebrand factor type A domain; MxaC protein complement(540619..541440) Methylophaga nitratireducenticrescens 12845556 YP_006295022.1 CDS Q7A_531 NC_017857.1 541593 542558 R MxaA protein complement(541593..542558) Methylophaga nitratireducenticrescens 12845557 YP_006295023.1 CDS Q7A_532 NC_017857.1 542548 543381 R hypothetical protein complement(542548..543381) Methylophaga nitratireducenticrescens 12845558 YP_006295024.1 CDS Q7A_533 NC_017857.1 543378 544412 R PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase complement(543378..544412) Methylophaga nitratireducenticrescens 12845559 YP_006295025.1 CDS Q7A_534 NC_017857.1 544496 544771 R PFAM: Methanol dehydrogenase beta subunit; methanol dehydrogenase small subunit complement(544496..544771) Methylophaga nitratireducenticrescens 12845560 YP_006295026.1 CDS Q7A_535 NC_017857.1 544903 545445 R PFAM: Cytochrome c; TIGRFAM: cytochrome c(L), periplasmic; cytochrome c, class I complement(544903..545445) Methylophaga nitratireducenticrescens 12845561 YP_006295027.1 CDS Q7A_536 NC_017857.1 545535 546332 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: methanol oxidation system protein MoxJ; MxaJ protein complement(545535..546332) Methylophaga nitratireducenticrescens 12845562 YP_006295028.1 CDS Q7A_537 NC_017857.1 546509 548395 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein complement(546509..548395) Methylophaga nitratireducenticrescens 12845563 YP_006295029.1 CDS Q7A_538 NC_017857.1 548600 549253 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator complement(548600..549253) Methylophaga nitratireducenticrescens 12845564 YP_006295030.1 CDS Q7A_539 NC_017857.1 549300 550271 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; two-component sensor histidine kinase complement(549300..550271) Methylophaga nitratireducenticrescens 12845565 YP_006295031.1 CDS Q7A_540 NC_017857.1 550494 550826 D hypothetical protein 550494..550826 Methylophaga nitratireducenticrescens 12845566 YP_006295032.1 CDS Q7A_541 NC_017857.1 550865 551380 D PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD protein 550865..551380 Methylophaga nitratireducenticrescens 12845567 YP_006295033.1 CDS Q7A_542 NC_017857.1 551387 552322 D PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein 551387..552322 Methylophaga nitratireducenticrescens 12845568 YP_006295034.1 CDS Q7A_543 NC_017857.1 552355 552819 R PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA (cytosine34-2'-O-)-methyltransferase complement(552355..552819) Methylophaga nitratireducenticrescens 12845569 YP_006295035.1 CDS Q7A_544 NC_017857.1 552822 554429 R PFAM: Transglycosylase SLT domain; LysM domain; membrane-bound lytic murein transglycosylase D complement(552822..554429) Methylophaga nitratireducenticrescens 12845570 YP_006295036.1 CDS Q7A_545 NC_017857.1 554738 555541 D PFAM: Protein of unknown function (DUF2797); hypothetical protein 554738..555541 Methylophaga nitratireducenticrescens 12845571 YP_006295037.1 CDS Q7A_546 NC_017857.1 555547 556566 D PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; dihydroorotate dehydrogenase 555547..556566 Methylophaga nitratireducenticrescens 12845572 YP_006295038.1 CDS Q7A_547 NC_017857.1 556568 557407 D PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein 556568..557407 Methylophaga nitratireducenticrescens 12845573 YP_006295039.1 CDS Q7A_548 NC_017857.1 557420 558190 R PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(557420..558190) Methylophaga nitratireducenticrescens 12845574 YP_006295040.1 CDS Q7A_549 NC_017857.1 558214 558939 D PFAM: Methyltransferase domain; SAM-dependent methyltransferase 558214..558939 Methylophaga nitratireducenticrescens 12845575 YP_006295041.1 CDS Q7A_550 NC_017857.1 558939 559382 D PFAM: RNase H; ribonuclease HI 558939..559382 Methylophaga nitratireducenticrescens 12845576 YP_006295042.1 CDS Q7A_551 NC_017857.1 559386 560117 D PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III subunit epsilon 559386..560117 Methylophaga nitratireducenticrescens 12845577 YP_006295043.1 CDS Q7A_552 NC_017857.1 560214 560771 D PFAM: GrpE; Heat shock protein GrpE 560214..560771 Methylophaga nitratireducenticrescens 12845578 YP_006295044.1 CDS Q7A_553 NC_017857.1 560872 562794 D PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK 560872..562794 Methylophaga nitratireducenticrescens 12845579 YP_006295045.1 CDS Q7A_554 NC_017857.1 562876 563988 D PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein DnaJ 562876..563988 Methylophaga nitratireducenticrescens 12845580 YP_006295046.1 CDS Q7A_555 NC_017857.1 564074 564883 D PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 564074..564883 Methylophaga nitratireducenticrescens 12845581 YP_006295047.1 CDS Q7A_556 NC_017857.1 564884 565270 R hypothetical protein complement(564884..565270) Methylophaga nitratireducenticrescens 12845582 YP_006295048.1 CDS Q7A_557 NC_017857.1 565269 565496 D hypothetical protein 565269..565496 Methylophaga nitratireducenticrescens 12845583 YP_006295049.1 CDS Q7A_558 NC_017857.1 565464 567698 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; multimodular transpeptidase-transglycosylase complement(565464..567698) Methylophaga nitratireducenticrescens 12845584 YP_006295050.1 CDS Q7A_559 NC_017857.1 568045 569361 D PFAM: Bacterial protein of unknown function (DUF898); thymidylate kinase 568045..569361 Methylophaga nitratireducenticrescens 12845585 YP_006295051.1 CDS Q7A_560 NC_017857.1 569364 570521 D PFAM: Peptidase family M48; Zn-dependent protease 569364..570521 Methylophaga nitratireducenticrescens 12845586 YP_006295052.1 CDS Q7A_561 NC_017857.1 570717 571271 D PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 570717..571271 Methylophaga nitratireducenticrescens 12845587 YP_006295053.1 CDS Q7A_562 NC_017857.1 571298 573286 D PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase 571298..573286 Methylophaga nitratireducenticrescens 12845588 YP_006295054.1 CDS Q7A_563 NC_017857.1 573498 574496 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 573498..574496 Methylophaga nitratireducenticrescens 12845589 YP_006295055.1 CDS Q7A_564 NC_017857.1 574616 575800 D PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 574616..575800 Methylophaga nitratireducenticrescens 12845590 YP_006295056.1 CDS Q7A_565 NC_017857.1 575819 577285 D PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 575819..577285 Methylophaga nitratireducenticrescens 12845591 YP_006295057.1 CDS Q7A_566 NC_017857.1 577310 578380 D PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; fructose-bisphosphate aldolase class II 577310..578380 Methylophaga nitratireducenticrescens 12845592 YP_006295058.1 CDS Q7A_567 NC_017857.1 578523 578897 D PFAM: CrcB-like protein; TIGRFAM: protein CrcB; crcB-like protein 578523..578897 Methylophaga nitratireducenticrescens 12845593 YP_006295059.1 CDS Q7A_568 NC_017857.1 578894 579184 D PFAM: Uncharacterized ACR, COG1993; hypothetical protein 578894..579184 Methylophaga nitratireducenticrescens 12845594 YP_006295060.1 CDS Q7A_569 NC_017857.1 579186 580460 D PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 579186..580460 Methylophaga nitratireducenticrescens 12845595 YP_006295061.1 CDS Q7A_570 NC_017857.1 580453 581133 D PFAM: Peptidase family M50; membrane metalloprotease 580453..581133 Methylophaga nitratireducenticrescens 12845596 YP_006295062.1 CDS Q7A_571 NC_017857.1 581169 582386 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 581169..582386 Methylophaga nitratireducenticrescens 12845597 YP_006295063.1 CDS Q7A_572 NC_017857.1 582404 583324 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase B 582404..583324 Methylophaga nitratireducenticrescens 12845598 YP_006295064.1 CDS Q7A_573 NC_017857.1 583321 584247 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase complement(583321..584247) Methylophaga nitratireducenticrescens 12845599 YP_006295065.1 CDS Q7A_574 NC_017857.1 584337 585098 R PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(584337..585098) Methylophaga nitratireducenticrescens 12845600 YP_006295066.1 CDS Q7A_575 NC_017857.1 585108 585473 R hypothetical protein complement(585108..585473) Methylophaga nitratireducenticrescens 12845683 YP_006295067.1 CDS Q7A_576 NC_017857.1 585686 586969 R PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase; phytoene desaturase complement(585686..586969) Methylophaga nitratireducenticrescens 12845684 YP_006295068.1 CDS Q7A_577 NC_017857.1 586971 587828 R PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; phytoene synthase complement(586971..587828) Methylophaga nitratireducenticrescens 12845685 YP_006295069.1 CDS Q7A_578 NC_017857.1 587825 587938 R hypothetical protein complement(587825..587938) Methylophaga nitratireducenticrescens 12845686 YP_006295070.1 CDS Q7A_579 NC_017857.1 588183 589151 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(588183..589151) Methylophaga nitratireducenticrescens 12845687 YP_006295071.1 CDS Q7A_580 NC_017857.1 589319 589630 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 589319..589630 Methylophaga nitratireducenticrescens 12845688 YP_006295072.1 CDS Q7A_581 NC_017857.1 589659 589916 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 589659..589916 Methylophaga nitratireducenticrescens 12845689 YP_006295073.1 CDS Q7A_582 NC_017857.1 589977 591062 D PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTP-binding protein Obg 589977..591062 Methylophaga nitratireducenticrescens 12845690 YP_006295074.1 CDS Q7A_583 NC_017857.1 591065 592195 D PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 591065..592195 Methylophaga nitratireducenticrescens 12845691 YP_006295075.1 CDS Q7A_584 NC_017857.1 592258 592518 R PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(592258..592518) Methylophaga nitratireducenticrescens 12845692 YP_006295076.1 CDS Q7A_585 NC_017857.1 592623 593405 D PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); Exodeoxyribonuclease III 592623..593405 Methylophaga nitratireducenticrescens 12845693 YP_006295077.1 CDS Q7A_586 NC_017857.1 593461 593628 D hypothetical protein 593461..593628 Methylophaga nitratireducenticrescens 12845694 YP_006295078.1 CDS Q7A_587 NC_017857.1 594468 596594 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ complement(594468..596594) Methylophaga nitratireducenticrescens 12845695 YP_006295079.1 CDS Q7A_588 NC_017857.1 596823 597179 D hypothetical protein 596823..597179 Methylophaga nitratireducenticrescens 12845696 YP_006295080.1 CDS Q7A_589 NC_017857.1 597916 598263 D PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily 597916..598263 Methylophaga nitratireducenticrescens 12845697 YP_006295081.1 CDS Q7A_590 NC_017857.1 598366 598626 R PFAM: Helix-turn-helix; XRE family transcriptional regulator complement(598366..598626) Methylophaga nitratireducenticrescens 12845698 YP_006295082.1 CDS Q7A_591 NC_017857.1 598628 598909 R TIGRFAM: addiction module toxin, RelE/StbE family; addiction module toxin complement(598628..598909) Methylophaga nitratireducenticrescens 12845699 YP_006295083.1 CDS Q7A_592 NC_017857.1 599418 599543 D hypothetical protein 599418..599543 Methylophaga nitratireducenticrescens 12845700 YP_006295084.1 CDS Q7A_593 NC_017857.1 600413 600538 R hypothetical protein complement(600413..600538) Methylophaga nitratireducenticrescens 12845701 YP_006295085.1 CDS Q7A_594 NC_017857.1 600947 602035 R PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; DNA polymerase IV complement(600947..602035) Methylophaga nitratireducenticrescens 12845702 YP_006295086.1 CDS Q7A_595 NC_017857.1 602048 602164 D hypothetical protein 602048..602164 Methylophaga nitratireducenticrescens 12845703 YP_006295087.1 CDS Q7A_596 NC_017857.1 602270 603895 D PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease; AmpG permease 602270..603895 Methylophaga nitratireducenticrescens 12845704 YP_006295088.1 CDS Q7A_597 NC_017857.1 603907 604497 D hypothetical protein 603907..604497 Methylophaga nitratireducenticrescens 12845705 YP_006295089.1 CDS Q7A_598 NC_017857.1 604584 604967 D hypothetical protein 604584..604967 Methylophaga nitratireducenticrescens 12845706 YP_006295090.1 CDS Q7A_599 NC_017857.1 604989 606350 R PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase; decarboxylase-like protein complement(604989..606350) Methylophaga nitratireducenticrescens 12845707 YP_006295091.1 CDS Q7A_600 NC_017857.1 606500 606997 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein complement(606500..606997) Methylophaga nitratireducenticrescens 12845708 YP_006295092.1 CDS Q7A_601 NC_017857.1 607037 608422 R PFAM: Major Facilitator Superfamily; transport protein complement(607037..608422) Methylophaga nitratireducenticrescens 12845709 YP_006295093.1 CDS Q7A_602 NC_017857.1 608473 611292 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 608473..611292 Methylophaga nitratireducenticrescens 12845710 YP_006295094.1 CDS Q7A_603 NC_017857.1 611289 611912 D PFAM: CYTH domain; adenylate cyclase 611289..611912 Methylophaga nitratireducenticrescens 12845711 YP_006295095.1 CDS Q7A_604 NC_017857.1 611917 612963 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB complement(611917..612963) Methylophaga nitratireducenticrescens 12845712 YP_006295096.1 CDS Q7A_605 NC_017857.1 612968 614014 R PFAM: ApbE family; membrane-associated lipoprotein complement(612968..614014) Methylophaga nitratireducenticrescens 12845713 YP_006295097.1 CDS Q7A_606 NC_017857.1 614011 614955 R PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase complement(614011..614955) Methylophaga nitratireducenticrescens 12845714 YP_006295098.1 CDS Q7A_607 NC_017857.1 615135 616064 D PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 615135..616064 Methylophaga nitratireducenticrescens 12845715 YP_006295099.1 CDS Q7A_608 NC_017857.1 616067 618145 D PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 616067..618145 Methylophaga nitratireducenticrescens 12845716 YP_006295100.1 CDS Q7A_609 NC_017857.1 618155 618694 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; Histidinol-phosphatase 618155..618694 Methylophaga nitratireducenticrescens 12845717 YP_006295101.1 CDS Q7A_610 NC_017857.1 618694 619446 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 618694..619446 Methylophaga nitratireducenticrescens 12845718 YP_006295102.1 CDS Q7A_611 NC_017857.1 619433 621514 D PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 619433..621514 Methylophaga nitratireducenticrescens 12845719 YP_006295103.1 CDS Q7A_612 NC_017857.1 621567 622448 R PFAM: Peptidase family M48; htpX-like protease complement(621567..622448) Methylophaga nitratireducenticrescens 12845720 YP_006295104.1 CDS Q7A_613 NC_017857.1 622580 623599 R PFAM: ATP-grasp domain; ATP-grasp domain-containing protein complement(622580..623599) Methylophaga nitratireducenticrescens 12845721 YP_006295105.1 CDS Q7A_614 NC_017857.1 623624 624529 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylene tetrahydromethanopterin dehydrogenase complement(623624..624529) Methylophaga nitratireducenticrescens 12845722 YP_006295106.1 CDS Q7A_615 NC_017857.1 624563 625573 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase complement(624563..625573) Methylophaga nitratireducenticrescens 12845723 YP_006295107.1 CDS Q7A_616 NC_017857.1 625591 626454 R PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Shikimate / quinate 5-dehydrogenase; methylene tetrahydromethanopterin dehydrogenase complement(625591..626454) Methylophaga nitratireducenticrescens 12845724 YP_006295108.1 CDS Q7A_617 NC_017857.1 626673 627035 D hypothetical protein 626673..627035 Methylophaga nitratireducenticrescens 12845725 YP_006295109.1 CDS Q7A_618 NC_017857.1 627165 627284 R hypothetical protein complement(627165..627284) Methylophaga nitratireducenticrescens 12845726 YP_006295110.1 CDS Q7A_619 NC_017857.1 627810 628562 R PFAM: Sulphur oxidation protein SoxZ; hypothetical protein complement(627810..628562) Methylophaga nitratireducenticrescens 12845727 YP_006295111.1 CDS Q7A_620 NC_017857.1 628624 629556 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(628624..629556) Methylophaga nitratireducenticrescens 12845728 YP_006295112.1 CDS Q7A_621 NC_017857.1 629646 631049 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 629646..631049 Methylophaga nitratireducenticrescens 12845729 YP_006295113.1 CDS Q7A_622 NC_017857.1 631256 633034 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 631256..633034 Methylophaga nitratireducenticrescens 12845730 YP_006295114.1 CDS Q7A_623 NC_017857.1 633301 634047 D PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein; MxaJ protein 633301..634047 Methylophaga nitratireducenticrescens 12845731 YP_006295115.1 CDS Q7A_624 NC_017857.1 634085 634270 R hypothetical protein complement(634085..634270) Methylophaga nitratireducenticrescens 12845732 YP_006295116.1 CDS Q7A_625 NC_017857.1 634664 635305 D hypothetical protein 634664..635305 Methylophaga nitratireducenticrescens 12845733 YP_006295117.1 CDS Q7A_626 NC_017857.1 635363 636820 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor signal transduction histidine kinase 635363..636820 Methylophaga nitratireducenticrescens 12845734 YP_006295118.1 CDS Q7A_627 NC_017857.1 637015 638391 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component transcriptional regulator 637015..638391 Methylophaga nitratireducenticrescens 12845735 YP_006295119.1 CDS Q7A_628 NC_017857.1 638393 638800 R PFAM: Stringent starvation protein B; stringent starvation protein B complement(638393..638800) Methylophaga nitratireducenticrescens 12845736 YP_006295120.1 CDS Q7A_629 NC_017857.1 638804 639424 R PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Stringent starvation protein A complement(638804..639424) Methylophaga nitratireducenticrescens 12845737 YP_006295121.1 CDS Q7A_630 NC_017857.1 639457 640167 R PFAM: Cytochrome C1 family; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit complement(639457..640167) Methylophaga nitratireducenticrescens 12845738 YP_006295122.1 CDS Q7A_631 NC_017857.1 640164 641369 R PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD; Ubiquinol--cytochrome c reductase, cytochrome B subunit complement(640164..641369) Methylophaga nitratireducenticrescens 12845739 YP_006295123.1 CDS Q7A_632 NC_017857.1 641375 641968 R PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Ubiquinol-cytochrome C reductase iron-sulfur subunit complement(641375..641968) Methylophaga nitratireducenticrescens 12845740 YP_006295124.1 CDS Q7A_633 NC_017857.1 642140 642586 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor complement(642140..642586) Methylophaga nitratireducenticrescens 12845741 YP_006295125.1 CDS Q7A_634 NC_017857.1 643110 643226 R hypothetical protein complement(643110..643226) Methylophaga nitratireducenticrescens 12845742 YP_006295126.1 CDS Q7A_635 NC_017857.1 643618 643884 D PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; regulatory-like protein 643618..643884 Methylophaga nitratireducenticrescens 12845743 YP_006295127.1 CDS Q7A_636 NC_017857.1 643893 644525 D PFAM: Protein of unknown function (DUF502); transporter 643893..644525 Methylophaga nitratireducenticrescens 12845744 YP_006295128.1 CDS Q7A_637 NC_017857.1 644597 646375 D PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase 644597..646375 Methylophaga nitratireducenticrescens 12845745 YP_006295129.1 CDS Q7A_638 NC_017857.1 646418 647530 D PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase 646418..647530 Methylophaga nitratireducenticrescens 12845746 YP_006295130.1 CDS Q7A_639 NC_017857.1 647548 647733 D PFAM: Zinc-finger domain; hypothetical protein 647548..647733 Methylophaga nitratireducenticrescens 12845747 YP_006295131.1 CDS Q7A_640 NC_017857.1 647737 648138 D PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; mutator mutT protein 647737..648138 Methylophaga nitratireducenticrescens 12845748 YP_006295132.1 CDS Q7A_641 NC_017857.1 648195 648380 R PFAM: Domain of unknown function (DUF329); zinc-binding protein complement(648195..648380) Methylophaga nitratireducenticrescens 12845749 YP_006295133.1 CDS Q7A_642 NC_017857.1 648383 649153 R PFAM: Protein of unknown function (DUF1342); hypothetical protein complement(648383..649153) Methylophaga nitratireducenticrescens 12845750 YP_006295134.1 CDS Q7A_643 NC_017857.1 649199 649807 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(649199..649807) Methylophaga nitratireducenticrescens 12845751 YP_006295135.1 CDS Q7A_644 NC_017857.1 649809 650678 R PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; Leader peptidase (Prepilin peptidase) / N-methyltransferase complement(649809..650678) Methylophaga nitratireducenticrescens 12845752 YP_006295136.1 CDS Q7A_645 NC_017857.1 650683 651930 R PFAM: Bacterial type II secretion system protein F domain; type IV fimbrial assembly protein PilC complement(650683..651930) Methylophaga nitratireducenticrescens 12845753 YP_006295137.1 CDS Q7A_646 NC_017857.1 651934 653652 R PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; type IV fimbrial assembly, ATPase PilB complement(651934..653652) Methylophaga nitratireducenticrescens 12845754 YP_006295138.1 CDS Q7A_647 NC_017857.1 653858 653986 D hypothetical protein 653858..653986 Methylophaga nitratireducenticrescens 12845755 YP_006295139.1 CDS Q7A_648 NC_017857.1 653989 655242 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 653989..655242 Methylophaga nitratireducenticrescens 12845756 YP_006295140.1 CDS Q7A_649 NC_017857.1 655247 656095 D PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 655247..656095 Methylophaga nitratireducenticrescens 12845757 YP_006295141.1 CDS Q7A_650 NC_017857.1 656071 656781 D PFAM: Protein of unknown function, DUF484; hypothetical protein 656071..656781 Methylophaga nitratireducenticrescens 12845758 YP_006295142.1 CDS Q7A_651 NC_017857.1 656771 657679 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerC 656771..657679 Methylophaga nitratireducenticrescens 12845759 YP_006295143.1 CDS Q7A_652 NC_017857.1 657934 658953 D PFAM: Sodium/calcium exchanger protein; Cation antiporter 657934..658953 Methylophaga nitratireducenticrescens 12845760 YP_006295144.1 CDS Q7A_653 NC_017857.1 659447 660262 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(659447..660262) Methylophaga nitratireducenticrescens 12845761 YP_006295145.1 CDS Q7A_654 NC_017857.1 660661 662058 R PFAM: FAD binding domain of DNA photolyase; DNA photolyase; Deoxyribodipyrimidine photolyase complement(660661..662058) Methylophaga nitratireducenticrescens 12845762 YP_006295146.1 CDS Q7A_655 NC_017857.1 662068 663600 R PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; alpha-deoxyribodipyrimidine photolyase-related protein complement(662068..663600) Methylophaga nitratireducenticrescens 12845763 YP_006295147.1 CDS Q7A_656 NC_017857.1 663593 664006 R PFAM: Protein of unknown function (DUF3429); hypothetical protein complement(663593..664006) Methylophaga nitratireducenticrescens 12845764 YP_006295148.1 CDS Q7A_657 NC_017857.1 664003 665451 R PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon complement(664003..665451) Methylophaga nitratireducenticrescens 12845765 YP_006295149.1 CDS Q7A_658 NC_017857.1 665768 666652 D PFAM: Transposase DDE domain; transposase, IS982 family 665768..666652 Methylophaga nitratireducenticrescens 12845848 YP_006295150.1 CDS Q7A_659 NC_017857.1 666683 667234 R PFAM: Exonuclease; 3'-to-5' oligoribonuclease complement(666683..667234) Methylophaga nitratireducenticrescens 12845849 YP_006295151.1 CDS Q7A_660 NC_017857.1 667344 668591 D PFAM: Peptidase family M48; macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides; hypothetical protein 667344..668591 Methylophaga nitratireducenticrescens 12845850 YP_006295152.1 CDS Q7A_661 NC_017857.1 668754 668870 D hypothetical protein 668754..668870 Methylophaga nitratireducenticrescens 12845851 YP_006295153.1 CDS Q7A_662 NC_017857.1 668871 669908 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(668871..669908) Methylophaga nitratireducenticrescens 12845852 YP_006295154.1 CDS Q7A_663 NC_017857.1 669935 671188 R PFAM: Major Facilitator Superfamily; long-chain-fatty-acid--CoA ligase complement(669935..671188) Methylophaga nitratireducenticrescens 12845853 YP_006295155.1 CDS Q7A_664 NC_017857.1 671196 671642 R PFAM: Universal stress protein family; Universal stress protein complement(671196..671642) Methylophaga nitratireducenticrescens 12845854 YP_006295156.1 CDS Q7A_665 NC_017857.1 671697 672635 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase complement(671697..672635) Methylophaga nitratireducenticrescens 12845855 YP_006295157.1 CDS Q7A_666 NC_017857.1 673038 675341 D PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK 673038..675341 Methylophaga nitratireducenticrescens 12845856 YP_006295158.1 CDS Q7A_667 NC_017857.1 675402 676034 D PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; outer membrane lipoprotein carrier protein LolA 675402..676034 Methylophaga nitratireducenticrescens 12845857 YP_006295159.1 CDS Q7A_668 NC_017857.1 676034 677356 D PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase 676034..677356 Methylophaga nitratireducenticrescens 12845858 YP_006295160.1 CDS Q7A_669 NC_017857.1 677363 678118 R PFAM: Protein of unknown function (DUF548); SAM-dependent methyltransferase complement(677363..678118) Methylophaga nitratireducenticrescens 12845859 YP_006295161.1 CDS Q7A_670 NC_017857.1 678125 679117 R PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein complement(678125..679117) Methylophaga nitratireducenticrescens 12845860 YP_006295162.1 CDS Q7A_671 NC_017857.1 679117 679680 R PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD complement(679117..679680) Methylophaga nitratireducenticrescens 12845861 YP_006295163.1 CDS Q7A_672 NC_017857.1 679883 680689 D PFAM: ABC transporter; ABC transporter, ATP-binding protein YrbF 679883..680689 Methylophaga nitratireducenticrescens 12845862 YP_006295164.1 CDS Q7A_673 NC_017857.1 680686 681468 D PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; ABC transporter, permease component YrbE 680686..681468 Methylophaga nitratireducenticrescens 12845863 YP_006295165.1 CDS Q7A_674 NC_017857.1 681469 681933 D PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; ABC transporter, periplasmic component YrbD 681469..681933 Methylophaga nitratireducenticrescens 12845864 YP_006295166.1 CDS Q7A_675 NC_017857.1 681935 682561 D PFAM: Toluene tolerance, Ttg2; Toluene tolerance protein 681935..682561 Methylophaga nitratireducenticrescens 12845865 YP_006295167.1 CDS Q7A_676 NC_017857.1 682558 682854 D sulfate transporter/antisigma-factor antagonist STAS 682558..682854 Methylophaga nitratireducenticrescens 12845866 YP_006295168.1 CDS Q7A_677 NC_017857.1 682876 683100 D PFAM: BolA-like protein; transcriptional regulator BolA-like protein 682876..683100 Methylophaga nitratireducenticrescens 12845867 YP_006295169.1 CDS Q7A_678 NC_017857.1 683131 684417 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 683131..684417 Methylophaga nitratireducenticrescens 12845868 YP_006295170.1 CDS Q7A_679 NC_017857.1 684410 685054 D PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit 684410..685054 Methylophaga nitratireducenticrescens 12845869 YP_006295171.1 CDS Q7A_680 NC_017857.1 685047 686351 D PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 685047..686351 Methylophaga nitratireducenticrescens 12845870 YP_006295172.1 CDS Q7A_681 NC_017857.1 686351 687406 D PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 686351..687406 Methylophaga nitratireducenticrescens 12845871 YP_006295173.1 CDS Q7A_682 NC_017857.1 687403 688071 R hypothetical protein complement(687403..688071) Methylophaga nitratireducenticrescens 12845872 YP_006295174.1 CDS Q7A_683 NC_017857.1 688099 688860 D PFAM: Sulfite exporter TauE/SafE; permease 688099..688860 Methylophaga nitratireducenticrescens 12845873 YP_006295175.1 CDS Q7A_684 NC_017857.1 689131 689772 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(689131..689772) Methylophaga nitratireducenticrescens 12845874 YP_006295176.1 CDS Q7A_685 NC_017857.1 689769 690371 R PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; methionine biosynthesis protein MetW complement(689769..690371) Methylophaga nitratireducenticrescens 12845875 YP_006295177.1 CDS Q7A_686 NC_017857.1 690371 691519 R PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine O-acetyltransferase complement(690371..691519) Methylophaga nitratireducenticrescens 12845876 YP_006295178.1 CDS Q7A_687 NC_017857.1 691541 692116 R PFAM: YGGT family; integral membrane protein YggT complement(691541..692116) Methylophaga nitratireducenticrescens 12845877 YP_006295179.1 CDS Q7A_688 NC_017857.1 692109 692942 R PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(692109..692942) Methylophaga nitratireducenticrescens 12845878 YP_006295180.1 CDS Q7A_689 NC_017857.1 692991 693689 R PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate enzyme complement(692991..693689) Methylophaga nitratireducenticrescens 12845879 YP_006295181.1 CDS Q7A_690 NC_017857.1 693781 694818 D PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 693781..694818 Methylophaga nitratireducenticrescens 12845880 YP_006295182.1 CDS Q7A_691 NC_017857.1 694828 695970 D PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 694828..695970 Methylophaga nitratireducenticrescens 12845881 YP_006295183.1 CDS Q7A_692 NC_017857.1 696143 696994 D PFAM: OmpA family; outer membrane protein A precursor 696143..696994 Methylophaga nitratireducenticrescens 12845882 YP_006295184.1 CDS Q7A_693 NC_017857.1 697396 697587 D PFAM: CsbD-like; CsbD family protein 697396..697587 Methylophaga nitratireducenticrescens 12845883 YP_006295185.1 CDS Q7A_694 NC_017857.1 697806 698363 D PFAM: Putative phospholipid-binding domain; hypothetical protein 697806..698363 Methylophaga nitratireducenticrescens 12845884 YP_006295186.1 CDS Q7A_695 NC_017857.1 698371 698832 D hypothetical protein 698371..698832 Methylophaga nitratireducenticrescens 12845885 YP_006295187.1 CDS Q7A_696 NC_017857.1 699053 700279 D PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family sigma-54 specific transcriptional regulator 699053..700279 Methylophaga nitratireducenticrescens 12845886 YP_006295188.1 CDS Q7A_697 NC_017857.1 700458 701771 R PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain; HipA protein complement(700458..701771) Methylophaga nitratireducenticrescens 12845887 YP_006295189.1 CDS Q7A_698 NC_017857.1 701773 702024 R PFAM: Helix-turn-helix; transcriptional regulator complement(701773..702024) Methylophaga nitratireducenticrescens 12845888 YP_006295190.1 CDS Q7A_699 NC_017857.1 702269 702439 D transposase, IS982 family 702269..702439 Methylophaga nitratireducenticrescens 12845889 YP_006295191.1 CDS Q7A_700 NC_017857.1 702447 702818 D resolvase 702447..702818 Methylophaga nitratireducenticrescens 12845890 YP_006295192.1 CDS Q7A_701 NC_017857.1 703366 703719 D hypothetical protein 703366..703719 Methylophaga nitratireducenticrescens 12845891 YP_006295193.1 CDS Q7A_702 NC_017857.1 704176 704361 D hypothetical protein 704176..704361 Methylophaga nitratireducenticrescens 12845892 YP_006295194.1 CDS Q7A_703 NC_017857.1 704394 705029 D PFAM: Integrase core domain; transposase 704394..705029 Methylophaga nitratireducenticrescens 12845893 YP_006295195.1 CDS Q7A_704 NC_017857.1 705333 706010 D PFAM: SNARE associated Golgi protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 705333..706010 Methylophaga nitratireducenticrescens 12845894 YP_006295196.1 CDS Q7A_705 NC_017857.1 706028 708250 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(706028..708250) Methylophaga nitratireducenticrescens 12845895 YP_006295197.1 CDS Q7A_706 NC_017857.1 708681 709388 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two component Transcriptional regulator 708681..709388 Methylophaga nitratireducenticrescens 12845896 YP_006295198.1 CDS Q7A_707 NC_017857.1 709385 710662 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor 709385..710662 Methylophaga nitratireducenticrescens 12845897 YP_006295199.1 CDS Q7A_708 NC_017857.1 710797 711045 D PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 710797..711045 Methylophaga nitratireducenticrescens 12845898 YP_006295200.1 CDS Q7A_709 NC_017857.1 711082 713040 D PFAM: Sulfatase; phosphoglycerol transferase I 711082..713040 Methylophaga nitratireducenticrescens 12845899 YP_006295201.1 CDS Q7A_710 NC_017857.1 713109 713717 R PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase complement(713109..713717) Methylophaga nitratireducenticrescens 12845900 YP_006295202.1 CDS Q7A_711 NC_017857.1 714190 714402 R hypothetical protein complement(714190..714402) Methylophaga nitratireducenticrescens 12845901 YP_006295203.1 CDS Q7A_712 NC_017857.1 714512 714820 R PFAM: Protein of unknown function (DUF3423); hypothetical protein complement(714512..714820) Methylophaga nitratireducenticrescens 12845902 YP_006295204.1 CDS Q7A_713 NC_017857.1 715214 715438 D hypothetical protein 715214..715438 Methylophaga nitratireducenticrescens 12845903 YP_006295205.1 CDS Q7A_714 NC_017857.1 716589 716792 D hypothetical protein 716589..716792 Methylophaga nitratireducenticrescens 12845904 YP_006295206.1 CDS Q7A_715 NC_017857.1 716987 717235 R HipA protein complement(716987..717235) Methylophaga nitratireducenticrescens 12845905 YP_006295207.1 CDS Q7A_716 NC_017857.1 717362 717721 D PFAM: Transposase; transposase 717362..717721 Methylophaga nitratireducenticrescens 12845906 YP_006295208.1 CDS Q7A_717 NC_017857.1 717718 718062 D PFAM: IS66 Orf2 like protein; transposase 717718..718062 Methylophaga nitratireducenticrescens 12845907 YP_006295209.1 CDS Q7A_718 NC_017857.1 718113 719645 D PFAM: Transposase IS66 family; transposase 718113..719645 Methylophaga nitratireducenticrescens 12845908 YP_006295210.1 CDS Q7A_719 NC_017857.1 719657 720694 R PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain; HipA protein complement(719657..720694) Methylophaga nitratireducenticrescens 12845909 YP_006295211.1 CDS Q7A_720 NC_017857.1 720696 720947 R PFAM: Helix-turn-helix; transcriptional regulator complement(720696..720947) Methylophaga nitratireducenticrescens 12845910 YP_006295212.1 CDS Q7A_721 NC_017857.1 721186 722514 D hypothetical protein 721186..722514 Methylophaga nitratireducenticrescens 12845911 YP_006295213.1 CDS Q7A_722 NC_017857.1 723353 724162 D PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); hypothetical protein 723353..724162 Methylophaga nitratireducenticrescens 12845912 YP_006295214.1 CDS Q7A_723 NC_017857.1 724143 727067 D hypothetical protein 724143..727067 Methylophaga nitratireducenticrescens 12845913 YP_006295215.1 CDS Q7A_724 NC_017857.1 727060 728466 D hypothetical protein 727060..728466 Methylophaga nitratireducenticrescens 12845914 YP_006295216.1 CDS Q7A_725 NC_017857.1 728459 729076 D hypothetical protein 728459..729076 Methylophaga nitratireducenticrescens 12845915 YP_006295217.1 CDS Q7A_726 NC_017857.1 729443 730549 D hypothetical protein 729443..730549 Methylophaga nitratireducenticrescens 12845916 YP_006295218.1 CDS Q7A_727 NC_017857.1 730593 731120 D hypothetical protein 730593..731120 Methylophaga nitratireducenticrescens 12845917 YP_006295219.1 CDS Q7A_728 NC_017857.1 731433 731681 D hypothetical protein 731433..731681 Methylophaga nitratireducenticrescens 12845918 YP_006295220.1 CDS Q7A_729 NC_017857.1 732085 733533 D PFAM: ThiF family; molybdopterin biosynthesis protein MoeB 732085..733533 Methylophaga nitratireducenticrescens 12845919 YP_006295221.1 CDS Q7A_730 NC_017857.1 734444 739723 D PFAM: Phage integrase family; phage integrase family protein 734444..739723 Methylophaga nitratireducenticrescens 12845920 YP_006295222.1 CDS Q7A_731 NC_017857.1 739720 740547 R hypothetical protein complement(739720..740547) Methylophaga nitratireducenticrescens 12845921 YP_006295223.1 CDS Q7A_732 NC_017857.1 740804 741091 R hypothetical protein complement(740804..741091) Methylophaga nitratireducenticrescens 12845922 YP_006295224.1 CDS Q7A_733 NC_017857.1 741103 742284 R PFAM: Domain of unknown function (DUF3596); Phage integrase family; phage integrase complement(741103..742284) Methylophaga nitratireducenticrescens 12845923 YP_006295225.1 CDS Q7A_734 NC_017857.1 742887 745202 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R 742887..745202 Methylophaga nitratireducenticrescens 12845924 YP_006295226.1 CDS Q7A_735 NC_017857.1 745206 746960 D ABC transporter ATP-binding protein 745206..746960 Methylophaga nitratireducenticrescens 12845925 YP_006295227.1 CDS Q7A_736 NC_017857.1 746963 748441 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M 746963..748441 Methylophaga nitratireducenticrescens 12845926 YP_006295228.1 CDS Q7A_737 NC_017857.1 748444 749688 D PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 748444..749688 Methylophaga nitratireducenticrescens 12845927 YP_006295229.1 CDS Q7A_738 NC_017857.1 749698 750840 D hypothetical protein 749698..750840 Methylophaga nitratireducenticrescens 12845928 YP_006295230.1 CDS Q7A_739 NC_017857.1 750842 752584 D PFAM: Domain of unknown function DUF87; Bipolar DNA helicase 750842..752584 Methylophaga nitratireducenticrescens 12845929 YP_006295231.1 CDS Q7A_741 NC_017857.1 753192 755699 R PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase complement(753192..755699) Methylophaga nitratireducenticrescens 12846013 YP_006295232.1 CDS Q7A_742 NC_017857.1 755906 756520 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; GTP-binding protein EngB complement(755906..756520) Methylophaga nitratireducenticrescens 12846014 YP_006295233.1 CDS Q7A_743 NC_017857.1 756606 757214 D PFAM: Cytochrome c; cytochrome c4 756606..757214 Methylophaga nitratireducenticrescens 12846015 YP_006295234.1 CDS Q7A_744 NC_017857.1 757290 759296 D PFAM: ResB-like family; cytochrome c-type biogenesis protein Ccs1/ResB 757290..759296 Methylophaga nitratireducenticrescens 12846016 YP_006295235.1 CDS Q7A_745 NC_017857.1 759337 760485 D PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; cytochrome c-type biogenesis protein CcsA/ResC 759337..760485 Methylophaga nitratireducenticrescens 12846017 YP_006295236.1 CDS Q7A_746 NC_017857.1 760507 761148 D PFAM: DSBA-like thioredoxin domain; periplasmic thiol:disulfide interchange protein DsbA 760507..761148 Methylophaga nitratireducenticrescens 12846018 YP_006295237.1 CDS Q7A_747 NC_017857.1 761201 762622 R PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; transglycosylase complement(761201..762622) Methylophaga nitratireducenticrescens 12846019 YP_006295238.1 CDS Q7A_748 NC_017857.1 762701 763150 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; tRNA-specific adenosine-34 deaminase complement(762701..763150) Methylophaga nitratireducenticrescens 12846020 YP_006295239.1 CDS Q7A_749 NC_017857.1 763137 764411 R PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); 3-deoxy-D-manno-octulosonic-acid transferase complement(763137..764411) Methylophaga nitratireducenticrescens 12846021 YP_006295240.1 CDS Q7A_750 NC_017857.1 764496 765443 D PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 764496..765443 Methylophaga nitratireducenticrescens 12846022 YP_006295241.1 CDS Q7A_751 NC_017857.1 765412 765900 R PFAM: Lipid A 3-O-deacylase (PagL); lipid A 3-O-deacylase (PagL) complement(765412..765900) Methylophaga nitratireducenticrescens 12846023 YP_006295242.1 CDS Q7A_752 NC_017857.1 766026 766415 R PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 complement(766026..766415) Methylophaga nitratireducenticrescens 12846024 YP_006295243.1 CDS Q7A_753 NC_017857.1 766428 766856 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 complement(766428..766856) Methylophaga nitratireducenticrescens 12846025 YP_006295244.1 CDS Q7A_754 NC_017857.1 766943 767740 R PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase complement(766943..767740) Methylophaga nitratireducenticrescens 12846026 YP_006295245.1 CDS Q7A_755 NC_017857.1 767948 771721 D PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain; FAD/FMN-containing dehydrogenase 767948..771721 Methylophaga nitratireducenticrescens 12846027 YP_006295246.1 CDS Q7A_756 NC_017857.1 771783 772130 R PFAM: HopJ type III effector protein; type III effector HopPmaJ complement(771783..772130) Methylophaga nitratireducenticrescens 12846028 YP_006295247.1 CDS Q7A_757 NC_017857.1 772146 772811 R PFAM: Nitroreductase family; nitroreductase complement(772146..772811) Methylophaga nitratireducenticrescens 12846029 YP_006295248.1 CDS Q7A_758 NC_017857.1 772801 773190 R PFAM: Protein of unknown function (DUF454); hypothetical protein complement(772801..773190) Methylophaga nitratireducenticrescens 12846030 YP_006295249.1 CDS Q7A_759 NC_017857.1 773532 773654 D hypothetical protein 773532..773654 Methylophaga nitratireducenticrescens 12846031 YP_006295250.1 CDS Q7A_760 NC_017857.1 773706 774614 D PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; 50S ribosomal subunit maturation GTPase RbgA 773706..774614 Methylophaga nitratireducenticrescens 12846032 YP_006295251.1 CDS Q7A_761 NC_017857.1 774698 775213 D PFAM: Outer membrane lipoprotein Slp family; Starvation lipoprotein Slp-like protein 774698..775213 Methylophaga nitratireducenticrescens 12846033 YP_006295252.1 CDS Q7A_762 NC_017857.1 775322 775507 D hypothetical protein 775322..775507 Methylophaga nitratireducenticrescens 12846034 YP_006295253.1 CDS Q7A_763 NC_017857.1 775510 775776 D hypothetical protein 775510..775776 Methylophaga nitratireducenticrescens 12846035 YP_006295254.1 CDS Q7A_764 NC_017857.1 775807 776025 D hypothetical protein 775807..776025 Methylophaga nitratireducenticrescens 12846036 YP_006295255.1 CDS Q7A_765 NC_017857.1 776198 776905 D pepSY-associated TM helix family protein 776198..776905 Methylophaga nitratireducenticrescens 12846037 YP_006295256.1 CDS Q7A_766 NC_017857.1 776952 777908 D hypothetical protein 776952..777908 Methylophaga nitratireducenticrescens 12846038 YP_006295257.1 CDS Q7A_767 NC_017857.1 777905 779371 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating); 6-phosphogluconate dehydrogenase 777905..779371 Methylophaga nitratireducenticrescens 12846039 YP_006295258.1 CDS Q7A_768 NC_017857.1 779431 780297 R PFAM: SdiA-regulated; hypothetical protein complement(779431..780297) Methylophaga nitratireducenticrescens 12846040 YP_006295259.1 CDS Q7A_769 NC_017857.1 780423 780854 R hypothetical protein complement(780423..780854) Methylophaga nitratireducenticrescens 12846041 YP_006295260.1 CDS Q7A_770 NC_017857.1 780881 781096 R PFAM: Acylphosphatase; acylphosphatase complement(780881..781096) Methylophaga nitratireducenticrescens 12846042 YP_006295261.1 CDS Q7A_771 NC_017857.1 781516 782301 R hypothetical protein complement(781516..782301) Methylophaga nitratireducenticrescens 12846043 YP_006295262.1 CDS Q7A_772 NC_017857.1 782369 783238 R Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase complement(782369..783238) Methylophaga nitratireducenticrescens 12846044 YP_006295263.1 CDS Q7A_773 NC_017857.1 783266 784231 R hypothetical protein complement(783266..784231) Methylophaga nitratireducenticrescens 12846045 YP_006295264.1 CDS Q7A_774 NC_017857.1 784618 785376 D hypothetical protein 784618..785376 Methylophaga nitratireducenticrescens 12846046 YP_006295265.1 CDS Q7A_775 NC_017857.1 785388 785534 D hypothetical protein 785388..785534 Methylophaga nitratireducenticrescens 12846047 YP_006295266.1 CDS Q7A_776 NC_017857.1 785574 785705 D hypothetical protein 785574..785705 Methylophaga nitratireducenticrescens 12846048 YP_006295267.1 CDS Q7A_777 NC_017857.1 785878 786279 R hypothetical protein complement(785878..786279) Methylophaga nitratireducenticrescens 12846049 YP_006295268.1 CDS Q7A_778 NC_017857.1 786504 787142 R hypothetical protein complement(786504..787142) Methylophaga nitratireducenticrescens 12846050 YP_006295269.1 CDS Q7A_779 NC_017857.1 787755 789332 R PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase complement(787755..789332) Methylophaga nitratireducenticrescens 12846051 YP_006295270.1 CDS Q7A_780 NC_017857.1 789393 790856 R PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase complement(789393..790856) Methylophaga nitratireducenticrescens 12846052 YP_006295271.1 CDS Q7A_781 NC_017857.1 790919 792421 D PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit 790919..792421 Methylophaga nitratireducenticrescens 12846053 YP_006295272.1 CDS Q7A_782 NC_017857.1 792418 793254 D PFAM: Peptidase family M23; metalloendopeptidases- like membrane protein 792418..793254 Methylophaga nitratireducenticrescens 12846054 YP_006295273.1 CDS Q7A_783 NC_017857.1 793236 795911 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box; PAS protein complement(793236..795911) Methylophaga nitratireducenticrescens 12846055 YP_006295274.1 CDS Q7A_784 NC_017857.1 796315 797040 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; lipopolysaccharide ABC transporter, ATP-binding protein LptB complement(796315..797040) Methylophaga nitratireducenticrescens 12846056 YP_006295275.1 CDS Q7A_785 NC_017857.1 797054 797863 R PFAM: OstA-like protein; Bacterial SH3 domain; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; LptA-like protein complement(797054..797863) Methylophaga nitratireducenticrescens 12846057 YP_006295276.1 CDS Q7A_786 NC_017857.1 797844 798371 R PFAM: Protein of unknown function (DUF1239); hypothetical protein complement(797844..798371) Methylophaga nitratireducenticrescens 12846058 YP_006295277.1 CDS Q7A_787 NC_017857.1 798397 798918 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(798397..798918) Methylophaga nitratireducenticrescens 12846059 YP_006295278.1 CDS Q7A_788 NC_017857.1 798934 799911 R PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; arabinose 5-phosphate isomerase complement(798934..799911) Methylophaga nitratireducenticrescens 12846060 YP_006295279.1 CDS Q7A_789 NC_017857.1 799908 800894 R PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG complement(799908..800894) Methylophaga nitratireducenticrescens 12846061 YP_006295280.1 CDS Q7A_790 NC_017857.1 800990 801718 R PFAM: VacJ like lipoprotein; surface lipoprotein complement(800990..801718) Methylophaga nitratireducenticrescens 12846062 YP_006295281.1 CDS Q7A_791 NC_017857.1 801847 802893 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(801847..802893) Methylophaga nitratireducenticrescens 12846063 YP_006295282.1 CDS Q7A_792 NC_017857.1 802893 803687 R Ser/Thr protein phosphatase family protein; UDP-2,3-diacylglucosamine hydrolase-like protein complement(802893..803687) Methylophaga nitratireducenticrescens 12846064 YP_006295283.1 CDS Q7A_793 NC_017857.1 803746 805866 D PFAM: Peptidase family M3; oligopeptidase A 803746..805866 Methylophaga nitratireducenticrescens 12846065 YP_006295284.1 CDS Q7A_794 NC_017857.1 805955 806371 R hypothetical protein complement(805955..806371) Methylophaga nitratireducenticrescens 12846066 YP_006295285.1 CDS Q7A_795 NC_017857.1 806451 806594 D hypothetical protein 806451..806594 Methylophaga nitratireducenticrescens 12846067 YP_006295286.1 CDS Q7A_796 NC_017857.1 806631 806897 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; DnaK suppressor protein complement(806631..806897) Methylophaga nitratireducenticrescens 12846068 YP_006295287.1 CDS Q7A_797 NC_017857.1 807408 807671 R PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; YoeB toxin protein complement(807408..807671) Methylophaga nitratireducenticrescens 12846069 YP_006295288.1 CDS Q7A_798 NC_017857.1 807664 807918 R PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; YefM protein (antitoxin to YoeB) complement(807664..807918) Methylophaga nitratireducenticrescens 12846070 YP_006295289.1 CDS Q7A_799 NC_017857.1 808122 808259 D hypothetical protein 808122..808259 Methylophaga nitratireducenticrescens 12846071 YP_006295290.1 CDS Q7A_800 NC_017857.1 809041 810525 D PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase 809041..810525 Methylophaga nitratireducenticrescens 12846072 YP_006295291.1 CDS Q7A_801 NC_017857.1 810514 810816 R PFAM: MAPEG family; glutathione S-transferase-like protein complement(810514..810816) Methylophaga nitratireducenticrescens 12846073 YP_006295292.1 CDS Q7A_802 NC_017857.1 810946 812694 R PFAM: Major Facilitator Superfamily; permease complement(810946..812694) Methylophaga nitratireducenticrescens 12846074 YP_006295293.1 CDS Q7A_803 NC_017857.1 812763 812969 R PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD; NADH-dependent formate dehydrogenase delta subunit FdsD complement(812763..812969) Methylophaga nitratireducenticrescens 12846075 YP_006295294.1 CDS Q7A_804 NC_017857.1 813023 813847 R PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D complement(813023..813847) Methylophaga nitratireducenticrescens 12846158 YP_006295295.1 CDS Q7A_805 NC_017857.1 813844 816723 R PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase subunit alpha complement(813844..816723) Methylophaga nitratireducenticrescens 12846159 YP_006295296.1 CDS Q7A_806 NC_017857.1 816727 818274 R PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NAD-dependent formate dehydrogenase subunit beta complement(816727..818274) Methylophaga nitratireducenticrescens 12846160 YP_006295297.1 CDS Q7A_807 NC_017857.1 818274 818765 R PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; NAD-dependent formate dehydrogenase gamma subunit complement(818274..818765) Methylophaga nitratireducenticrescens 12846161 YP_006295298.1 CDS Q7A_808 NC_017857.1 818961 820049 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdopterin binding domain-containing protein complement(818961..820049) Methylophaga nitratireducenticrescens 12846162 YP_006295299.1 CDS Q7A_809 NC_017857.1 820106 820540 R PFAM: MoaE protein; molybdenum cofactor biosynthesis protein MoaE complement(820106..820540) Methylophaga nitratireducenticrescens 12846163 YP_006295300.1 CDS Q7A_810 NC_017857.1 820543 820770 R PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 complement(820543..820770) Methylophaga nitratireducenticrescens 12846164 YP_006295301.1 CDS Q7A_811 NC_017857.1 820816 821295 D PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein MoaC 820816..821295 Methylophaga nitratireducenticrescens 12846165 YP_006295302.1 CDS Q7A_812 NC_017857.1 821439 822764 D PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 821439..822764 Methylophaga nitratireducenticrescens 12846166 YP_006295303.1 CDS Q7A_813 NC_017857.1 823061 824395 D PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 823061..824395 Methylophaga nitratireducenticrescens 12846167 YP_006295304.1 CDS Q7A_814 NC_017857.1 824479 825285 R ABC-type tungstate transport system, periplasmic binding protein complement(824479..825285) Methylophaga nitratireducenticrescens 12846168 YP_006295305.1 CDS Q7A_815 NC_017857.1 825406 826470 R PFAM: Uncharacterized protein conserved in bacteria (DUF2333); hypothetical protein complement(825406..826470) Methylophaga nitratireducenticrescens 12846169 YP_006295306.1 CDS Q7A_816 NC_017857.1 826734 827684 D PFAM: ABC transporter; ABC transporter ATP-binding protein 826734..827684 Methylophaga nitratireducenticrescens 12846170 YP_006295307.1 CDS Q7A_817 NC_017857.1 827684 828424 D gliding motility protein GldF 827684..828424 Methylophaga nitratireducenticrescens 12846171 YP_006295308.1 CDS Q7A_818 NC_017857.1 828440 830353 D PFAM: ABC-type uncharacterized transport system; gliding motility protein GldG 828440..830353 Methylophaga nitratireducenticrescens 12846172 YP_006295309.1 CDS Q7A_819 NC_017857.1 830408 831520 D hypothetical protein 830408..831520 Methylophaga nitratireducenticrescens 12846173 YP_006295310.1 CDS Q7A_820 NC_017857.1 831591 832544 R PFAM: CheW-like domain; Response regulator receiver domain; chemotaxis protein CheV complement(831591..832544) Methylophaga nitratireducenticrescens 12846174 YP_006295311.1 CDS Q7A_821 NC_017857.1 832672 833376 D PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagellar basal-body P-ring formation protein FlgA 832672..833376 Methylophaga nitratireducenticrescens 12846175 YP_006295312.1 CDS Q7A_822 NC_017857.1 833463 833777 D PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; anti-sigma-28 factor FlgM 833463..833777 Methylophaga nitratireducenticrescens 12846176 YP_006295313.1 CDS Q7A_823 NC_017857.1 833793 834281 D PFAM: FlgN protein; hypothetical protein 833793..834281 Methylophaga nitratireducenticrescens 12846177 YP_006295314.1 CDS Q7A_824 NC_017857.1 834312 835325 R PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; Ferrochelatase, protoheme ferro-lyase complement(834312..835325) Methylophaga nitratireducenticrescens 12846178 YP_006295315.1 CDS Q7A_825 NC_017857.1 835334 836248 R PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; cell division inhibitor complement(835334..836248) Methylophaga nitratireducenticrescens 12846179 YP_006295316.1 CDS Q7A_826 NC_017857.1 836360 837304 D PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722); COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA; hypothetical protein 836360..837304 Methylophaga nitratireducenticrescens 12846180 YP_006295317.1 CDS Q7A_827 NC_017857.1 837483 838472 D PFAM: Histone deacetylase domain; acetylspermidine deacetylase 837483..838472 Methylophaga nitratireducenticrescens 12846181 YP_006295318.1 CDS Q7A_828 NC_017857.1 838581 839468 D PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase 838581..839468 Methylophaga nitratireducenticrescens 12846182 YP_006295319.1 CDS Q7A_829 NC_017857.1 839674 842250 R PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; regulator of pathogenicity factors complement(839674..842250) Methylophaga nitratireducenticrescens 12846183 YP_006295320.1 CDS Q7A_830 NC_017857.1 842240 843355 R PFAM: HD domain; Response regulator receiver domain; response regulator complement(842240..843355) Methylophaga nitratireducenticrescens 12846184 YP_006295321.1 CDS Q7A_831 NC_017857.1 843673 844041 D PFAM: CbiX; Sirohydrochlorin cobaltochelatase 843673..844041 Methylophaga nitratireducenticrescens 12846185 YP_006295322.1 CDS Q7A_832 NC_017857.1 844092 844310 R hypothetical protein complement(844092..844310) Methylophaga nitratireducenticrescens 12846186 YP_006295323.1 CDS Q7A_833 NC_017857.1 844999 845439 D hypothetical protein 844999..845439 Methylophaga nitratireducenticrescens 12846187 YP_006295324.1 CDS Q7A_834 NC_017857.1 845545 847218 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(845545..847218) Methylophaga nitratireducenticrescens 12846188 YP_006295325.1 CDS Q7A_835 NC_017857.1 847620 848627 D PFAM: Fatty acid desaturase; beta-carotene ketolase 847620..848627 Methylophaga nitratireducenticrescens 12846189 YP_006295326.1 CDS Q7A_839 NC_017857.1 851064 851786 D hypothetical protein 851064..851786 Methylophaga nitratireducenticrescens 12846192 YP_006295327.1 CDS Q7A_840 NC_017857.1 851770 852627 D PFAM: Protein kinase domain; serine/threonine protein kinase 851770..852627 Methylophaga nitratireducenticrescens 12846193 YP_006295328.1 CDS Q7A_841 NC_017857.1 852660 853820 D hypothetical protein 852660..853820 Methylophaga nitratireducenticrescens 12846194 YP_006295329.1 CDS Q7A_842 NC_017857.1 853831 854559 R PFAM: Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase PrpC complement(853831..854559) Methylophaga nitratireducenticrescens 12846195 YP_006295330.1 CDS Q7A_843 NC_017857.1 855180 855809 R hypothetical protein complement(855180..855809) Methylophaga nitratireducenticrescens 12846196 YP_006295331.1 CDS Q7A_844 NC_017857.1 855904 856650 R PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; DNA replication protein complement(855904..856650) Methylophaga nitratireducenticrescens 12846197 YP_006295332.1 CDS Q7A_845 NC_017857.1 856628 858175 R PFAM: Integrase core domain; transposase complement(856628..858175) Methylophaga nitratireducenticrescens 12846198 YP_006295333.1 CDS Q7A_846 NC_017857.1 858407 859291 R PFAM: Competence protein CoiA-like family; competence protein complement(858407..859291) Methylophaga nitratireducenticrescens 12846199 YP_006295334.1 CDS Q7A_847 NC_017857.1 859403 859894 R acetyltransferase complement(859403..859894) Methylophaga nitratireducenticrescens 12846200 YP_006295335.1 CDS Q7A_848 NC_017857.1 859885 860013 R PFAM: Protein of unknown function (DUF1778); hypothetical protein complement(859885..860013) Methylophaga nitratireducenticrescens 12846201 YP_006295336.1 CDS Q7A_849 NC_017857.1 860538 860693 R hypothetical protein complement(860538..860693) Methylophaga nitratireducenticrescens 12846202 YP_006295337.1 CDS Q7A_850 NC_017857.1 860866 861189 R PFAM: Uncharacterized conserved protein (DUF2149); hypothetical protein complement(860866..861189) Methylophaga nitratireducenticrescens 12846203 YP_006295338.1 CDS Q7A_851 NC_017857.1 861186 861704 R transporter PduT for various metalloporphyrins complement(861186..861704) Methylophaga nitratireducenticrescens 12846204 YP_006295339.1 CDS Q7A_852 NC_017857.1 861706 865593 R PFAM: CobN/Magnesium Chelatase; CobN-like chelatase BtuS for metalloporphyrine salvage complement(861706..865593) Methylophaga nitratireducenticrescens 12846205 YP_006295340.1 CDS Q7A_853 NC_017857.1 865648 867570 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor complement(865648..867570) Methylophaga nitratireducenticrescens 12846206 YP_006295341.1 CDS Q7A_854 NC_017857.1 868270 868893 R PFAM: Protein of unknown function (DUF502); hypothetical protein complement(868270..868893) Methylophaga nitratireducenticrescens 12846207 YP_006295342.1 CDS Q7A_855 NC_017857.1 868928 869392 R NADH dehydrogenase complement(868928..869392) Methylophaga nitratireducenticrescens 12846208 YP_006295343.1 CDS Q7A_856 NC_017857.1 869397 869630 R PFAM: SirA-like protein; Rhodanese-like domain-containing protein complement(869397..869630) Methylophaga nitratireducenticrescens 12846209 YP_006295344.1 CDS Q7A_857 NC_017857.1 869790 871175 D PFAM: Peptidase family M48; peptidase M48 869790..871175 Methylophaga nitratireducenticrescens 12846210 YP_006295345.1 CDS Q7A_858 NC_017857.1 871172 871660 D sulfur oxidation protein SoxY 871172..871660 Methylophaga nitratireducenticrescens 12846211 YP_006295346.1 CDS Q7A_859 NC_017857.1 871660 871977 D PFAM: Sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ 871660..871977 Methylophaga nitratireducenticrescens 12846212 YP_006295347.1 CDS Q7A_860 NC_017857.1 871974 873689 D PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; methanol utilization control sensor protein moxY 871974..873689 Methylophaga nitratireducenticrescens 12846213 YP_006295348.1 CDS Q7A_861 NC_017857.1 873679 874323 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 873679..874323 Methylophaga nitratireducenticrescens 12846214 YP_006295349.1 CDS Q7A_862 NC_017857.1 874685 875875 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region 874685..875875 Methylophaga nitratireducenticrescens 12846215 YP_006295350.1 CDS Q7A_863 NC_017857.1 875865 876509 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA-binding response regulator 875865..876509 Methylophaga nitratireducenticrescens 12846216 YP_006295351.1 CDS Q7A_864 NC_017857.1 876697 878475 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 876697..878475 Methylophaga nitratireducenticrescens 12846217 YP_006295352.1 CDS Q7A_865 NC_017857.1 878974 879888 D TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ synthesis protein B 878974..879888 Methylophaga nitratireducenticrescens 12846218 YP_006295353.1 CDS Q7A_866 NC_017857.1 879911 880639 D PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; Coenzyme PQQ synthesis protein C 879911..880639 Methylophaga nitratireducenticrescens 12846219 YP_006295354.1 CDS Q7A_867 NC_017857.1 880636 880920 D PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D 880636..880920 Methylophaga nitratireducenticrescens 12846384 YP_006295355.1 CDS Q7A_868 NC_017857.1 880892 882085 D PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E 880892..882085 Methylophaga nitratireducenticrescens 12846385 YP_006295356.1 CDS Q7A_869 NC_017857.1 882075 883007 D PFAM: ABC transporter; ABC transporter ATP-binding protein 882075..883007 Methylophaga nitratireducenticrescens 12846386 YP_006295357.1 CDS Q7A_870 NC_017857.1 883004 883789 D PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; ABC transporter permease 883004..883789 Methylophaga nitratireducenticrescens 12846387 YP_006295358.1 CDS Q7A_871 NC_017857.1 883819 884634 D PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 883819..884634 Methylophaga nitratireducenticrescens 12846388 YP_006295359.1 CDS Q7A_872 NC_017857.1 884650 884976 D PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase 884650..884976 Methylophaga nitratireducenticrescens 12846389 YP_006295360.1 CDS Q7A_873 NC_017857.1 884986 886302 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC precursor 884986..886302 Methylophaga nitratireducenticrescens 12846390 YP_006295361.1 CDS Q7A_874 NC_017857.1 886324 886875 D PFAM: Isochorismatase family; isochorismatase 886324..886875 Methylophaga nitratireducenticrescens 12846391 YP_006295362.1 CDS Q7A_875 NC_017857.1 886872 887072 R PFAM: Protein of unknown function (DUF1289); Fe-S-like protein complement(886872..887072) Methylophaga nitratireducenticrescens 12846392 YP_006295363.1 CDS Q7A_876 NC_017857.1 887448 888959 R PFAM: Radical SAM superfamily; B12 binding domain; Mg-protoporphyrin IX monomethyl ester oxidative cyclase complement(887448..888959) Methylophaga nitratireducenticrescens 12846393 YP_006295364.1 CDS Q7A_877 NC_017857.1 888996 890438 R PFAM: Exonuclease; Exonuclease C-terminal; Exodeoxyribonuclease I complement(888996..890438) Methylophaga nitratireducenticrescens 12846394 YP_006295365.1 CDS Q7A_878 NC_017857.1 890439 891725 R PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde aminotransferase complement(890439..891725) Methylophaga nitratireducenticrescens 12846395 YP_006295366.1 CDS Q7A_879 NC_017857.1 891872 893209 D PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; periplasmic Sensor signal transduction Histidine Kinase 891872..893209 Methylophaga nitratireducenticrescens 12846396 YP_006295367.1 CDS Q7A_880 NC_017857.1 893206 893841 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 893206..893841 Methylophaga nitratireducenticrescens 12846397 YP_006295368.1 CDS Q7A_881 NC_017857.1 894175 894942 D PFAM: Protein of unknown function (DUF3450); hypothetical protein 894175..894942 Methylophaga nitratireducenticrescens 12846398 YP_006295369.1 CDS Q7A_882 NC_017857.1 894939 896300 D PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 894939..896300 Methylophaga nitratireducenticrescens 12846399 YP_006295370.1 CDS Q7A_883 NC_017857.1 896323 896805 D PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB 896323..896805 Methylophaga nitratireducenticrescens 12846400 YP_006295371.1 CDS Q7A_884 NC_017857.1 896814 897221 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 896814..897221 Methylophaga nitratireducenticrescens 12846401 YP_006295372.1 CDS Q7A_885 NC_017857.1 897241 897900 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 897241..897900 Methylophaga nitratireducenticrescens 12846402 YP_006295373.1 CDS Q7A_886 NC_017857.1 897903 899126 D TPR domain-containing protein 897903..899126 Methylophaga nitratireducenticrescens 12846403 YP_006295374.1 CDS Q7A_887 NC_017857.1 899119 899685 D PFAM: Class II Aldolase and Adducin N-terminal domain; ribulose-5-phosphate 4-epimerase-related epimerase/aldolase 899119..899685 Methylophaga nitratireducenticrescens 12846404 YP_006295375.1 CDS Q7A_888 NC_017857.1 900029 902176 D PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein 900029..902176 Methylophaga nitratireducenticrescens 12846405 YP_006295376.1 CDS Q7A_889 NC_017857.1 902163 903335 D PFAM: Aminotransferase class I and II; class I and II aminotransferase 902163..903335 Methylophaga nitratireducenticrescens 12846406 YP_006295377.1 CDS Q7A_890 NC_017857.1 903427 903630 D PFAM: Protein of unknown function (DUF2582); hypothetical protein 903427..903630 Methylophaga nitratireducenticrescens 12846407 YP_006295378.1 CDS Q7A_891 NC_017857.1 903627 904199 R PFAM: Protein of unknown function (DUF3365); cytochrome c-like protein complement(903627..904199) Methylophaga nitratireducenticrescens 12846408 YP_006295379.1 CDS Q7A_892 NC_017857.1 904508 906406 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; Topoisomerase IV subunit B 904508..906406 Methylophaga nitratireducenticrescens 12846409 YP_006295380.1 CDS Q7A_893 NC_017857.1 906421 908661 D PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; Topoisomerase IV subunit A 906421..908661 Methylophaga nitratireducenticrescens 12846410 YP_006295381.1 CDS Q7A_894 NC_017857.1 908715 909176 D PFAM: Protein of unknown function (DUF3305); hypothetical protein 908715..909176 Methylophaga nitratireducenticrescens 12846411 YP_006295382.1 CDS Q7A_895 NC_017857.1 909176 909637 D PFAM: Protein of unknown function (DUF3306); hypothetical protein 909176..909637 Methylophaga nitratireducenticrescens 12846412 YP_006295383.1 CDS Q7A_896 NC_017857.1 909630 911174 D PFAM: 4Fe-4S binding domain; Iron-sulfur cluster-binding protein 909630..911174 Methylophaga nitratireducenticrescens 12846413 YP_006295384.1 CDS Q7A_897 NC_017857.1 911180 911755 D PFAM: Nitrate reductase delta subunit; formate dehydrogenase-specific chaperone 911180..911755 Methylophaga nitratireducenticrescens 12846414 YP_006295385.1 CDS Q7A_898 NC_017857.1 912111 914984 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; formate dehydrogenase-O, major subunit 912111..914984 Methylophaga nitratireducenticrescens 12846415 YP_006295386.1 CDS Q7A_899 NC_017857.1 915001 915585 D formate dehydrogenase iron-sulfur subunit 915001..915585 Methylophaga nitratireducenticrescens 12846416 YP_006295387.1 CDS Q7A_900 NC_017857.1 915588 915767 D hypothetical protein 915588..915767 Methylophaga nitratireducenticrescens 12846417 YP_006295388.1 CDS Q7A_901 NC_017857.1 915778 916785 D PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase O subunit gamma 915778..916785 Methylophaga nitratireducenticrescens 12846418 YP_006295389.1 CDS Q7A_902 NC_017857.1 917110 918807 D PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; tungsten-containing formate dehydrogenase subunit beta 917110..918807 Methylophaga nitratireducenticrescens 12846419 YP_006295390.1 CDS Q7A_903 NC_017857.1 918807 921608 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; tungsten-containing formate dehydrogenase alpha subunit 918807..921608 Methylophaga nitratireducenticrescens 12846420 YP_006295391.1 CDS Q7A_904 NC_017857.1 921805 922524 D PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase 921805..922524 Methylophaga nitratireducenticrescens 12846421 YP_006295392.1 CDS Q7A_905 NC_017857.1 922521 923183 D PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 922521..923183 Methylophaga nitratireducenticrescens 12846422 YP_006295393.1 CDS Q7A_906 NC_017857.1 923180 923755 D PFAM: SNARE associated Golgi protein; lipoprotein B 923180..923755 Methylophaga nitratireducenticrescens 12846423 YP_006295394.1 CDS Q7A_907 NC_017857.1 923994 924146 R hypothetical protein complement(923994..924146) Methylophaga nitratireducenticrescens 12846424 YP_006295395.1 CDS Q7A_908 NC_017857.1 924160 924588 D PFAM: Peptidase family M23; lipoprotein NlpD 924160..924588 Methylophaga nitratireducenticrescens 12846425 YP_006295396.1 CDS Q7A_909 NC_017857.1 924698 925753 D PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 924698..925753 Methylophaga nitratireducenticrescens 12846426 YP_006295397.1 CDS Q7A_910 NC_017857.1 925765 927264 D PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase 925765..927264 Methylophaga nitratireducenticrescens 12846427 YP_006295398.1 CDS Q7A_911 NC_017857.1 927274 928239 R PFAM: Phage integrase family; TIGRFAM: integron integrase; integron integrase IntI4 complement(927274..928239) Methylophaga nitratireducenticrescens 12846428 YP_006295399.1 CDS Q7A_912 NC_017857.1 928983 929933 D hypothetical protein 928983..929933 Methylophaga nitratireducenticrescens 12846429 YP_006295400.1 CDS Q7A_913 NC_017857.1 930027 930572 D hypothetical protein 930027..930572 Methylophaga nitratireducenticrescens 12846430 YP_006295401.1 CDS Q7A_914 NC_017857.1 930683 931255 D hypothetical protein 930683..931255 Methylophaga nitratireducenticrescens 12846431 YP_006295402.1 CDS Q7A_915 NC_017857.1 932347 933099 D hypothetical protein 932347..933099 Methylophaga nitratireducenticrescens 12846432 YP_006295403.1 CDS Q7A_916 NC_017857.1 933332 933484 D hypothetical protein 933332..933484 Methylophaga nitratireducenticrescens 12846433 YP_006295404.1 CDS Q7A_917 NC_017857.1 933607 934518 D leucyl-tRNA synthetase 933607..934518 Methylophaga nitratireducenticrescens 12846434 YP_006295405.1 CDS Q7A_918 NC_017857.1 934659 934892 D hypothetical protein 934659..934892 Methylophaga nitratireducenticrescens 12846435 YP_006295406.1 CDS Q7A_919 NC_017857.1 935462 935800 D PFAM: Thioredoxin; thioredoxin-like protein 935462..935800 Methylophaga nitratireducenticrescens 12846436 YP_006295407.1 CDS Q7A_920 NC_017857.1 936122 936247 D hypothetical protein 936122..936247 Methylophaga nitratireducenticrescens 12846437 YP_006295408.1 CDS Q7A_921 NC_017857.1 936240 936527 D PFAM: Helix-turn-helix; DNA-binding protein 936240..936527 Methylophaga nitratireducenticrescens 12846438 YP_006295409.1 CDS Q7A_922 NC_017857.1 936569 937414 R PFAM: ATP dependent DNA ligase domain; DNA ligase (ATP) complement(936569..937414) Methylophaga nitratireducenticrescens 12846439 YP_006295410.1 CDS Q7A_923 NC_017857.1 937817 938155 D PFAM: Thioredoxin; thioredoxin-like protein 937817..938155 Methylophaga nitratireducenticrescens 12846440 YP_006295411.1 CDS Q7A_924 NC_017857.1 938217 938471 R PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; YoeB toxin protein complement(938217..938471) Methylophaga nitratireducenticrescens 12846441 YP_006295412.1 CDS Q7A_925 NC_017857.1 938468 938719 R PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; YefM protein (antitoxin to YoeB) complement(938468..938719) Methylophaga nitratireducenticrescens 12846442 YP_006295413.1 CDS Q7A_926 NC_017857.1 939127 940974 D PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 939127..940974 Methylophaga nitratireducenticrescens 12846443 YP_006295414.1 CDS Q7A_927 NC_017857.1 941216 942346 R iron-regulated membrane protein complement(941216..942346) Methylophaga nitratireducenticrescens 12846444 YP_006295415.1 CDS Q7A_928 NC_017857.1 942346 944418 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Ferric vulnibactin receptor VuuA complement(942346..944418) Methylophaga nitratireducenticrescens 12846445 YP_006295416.1 CDS Q7A_929 NC_017857.1 944585 945460 D transcriptional regulator 944585..945460 Methylophaga nitratireducenticrescens 12846446 YP_006295417.1 CDS Q7A_930 NC_017857.1 945639 946181 D transposase 945639..946181 Methylophaga nitratireducenticrescens 12846447 YP_006295418.1 CDS Q7A_931 NC_017857.1 946178 946471 D PFAM: Transposase DDE domain; IS4 family transposase 946178..946471 Methylophaga nitratireducenticrescens 12846448 YP_006295419.1 CDS Q7A_932 NC_017857.1 946847 946990 D hypothetical protein 946847..946990 Methylophaga nitratireducenticrescens 12846449 YP_006295420.1 CDS Q7A_933 NC_017857.1 947090 947641 D hypothetical protein 947090..947641 Methylophaga nitratireducenticrescens 12846450 YP_006295421.1 CDS Q7A_934 NC_017857.1 947668 948312 D PFAM: Methyltransferase domain; SAM-dependent methyltransferase 947668..948312 Methylophaga nitratireducenticrescens 12846451 YP_006295422.1 CDS Q7A_935 NC_017857.1 948429 948701 D PFAM: Ribbon-helix-helix protein, copG family; transcriptional regulator 948429..948701 Methylophaga nitratireducenticrescens 12846452 YP_006295423.1 CDS Q7A_936 NC_017857.1 948743 948979 D PFAM: Plasmid stabilisation system protein; plasmid stabilization system protein 948743..948979 Methylophaga nitratireducenticrescens 12846453 YP_006295424.1 CDS Q7A_937 NC_017857.1 949012 949125 R hypothetical protein complement(949012..949125) Methylophaga nitratireducenticrescens 12846454 YP_006295425.1 CDS Q7A_938 NC_017857.1 949308 949595 R PFAM: Protein of unknown function (DUF3144); hypothetical protein complement(949308..949595) Methylophaga nitratireducenticrescens 12846455 YP_006295426.1 CDS Q7A_939 NC_017857.1 949749 950090 D hypothetical protein 949749..950090 Methylophaga nitratireducenticrescens 12846456 YP_006295427.1 CDS Q7A_940 NC_017857.1 950133 952457 R spermidine synthase complement(950133..952457) Methylophaga nitratireducenticrescens 12846457 YP_006295428.1 CDS Q7A_941 NC_017857.1 952577 953332 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(952577..953332) Methylophaga nitratireducenticrescens 12846458 YP_006295429.1 CDS Q7A_942 NC_017857.1 953707 954579 D PFAM: RIO1 family; serine/threonine protein kinase 953707..954579 Methylophaga nitratireducenticrescens 12846459 YP_006295430.1 CDS Q7A_943 NC_017857.1 954866 955954 R PFAM: Endonuclease/Exonuclease/phosphatase family; hypothetical protein complement(954866..955954) Methylophaga nitratireducenticrescens 12846460 YP_006295431.1 CDS Q7A_944 NC_017857.1 956044 956172 D hypothetical protein 956044..956172 Methylophaga nitratireducenticrescens 12846461 YP_006295432.1 CDS Q7A_945 NC_017857.1 956564 958459 D PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; signal-transduction protein 956564..958459 Methylophaga nitratireducenticrescens 12846462 YP_006295433.1 CDS Q7A_946 NC_017857.1 958463 959185 D PFAM: Exonuclease; DNA polymerase III subunit epsilon 958463..959185 Methylophaga nitratireducenticrescens 12846463 YP_006295434.1 CDS Q7A_947 NC_017857.1 959196 960848 R PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT complement(959196..960848) Methylophaga nitratireducenticrescens 12846464 YP_006295435.1 CDS Q7A_948 NC_017857.1 960946 962226 R hypothetical protein complement(960946..962226) Methylophaga nitratireducenticrescens 12846465 YP_006295436.1 CDS Q7A_949 NC_017857.1 962766 963179 D PFAM: Universal stress protein family; universal stress protein UspA-like protein 962766..963179 Methylophaga nitratireducenticrescens 12846466 YP_006295437.1 CDS Q7A_950 NC_017857.1 963343 963465 R hypothetical protein complement(963343..963465) Methylophaga nitratireducenticrescens 12846549 YP_006295438.1 CDS Q7A_951 NC_017857.1 963702 964616 R PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; phytoene synthase complement(963702..964616) Methylophaga nitratireducenticrescens 12846550 YP_006295439.1 CDS Q7A_952 NC_017857.1 964606 965892 R PFAM: RmuC family; DNA recombination protein RmuC complement(964606..965892) Methylophaga nitratireducenticrescens 12846551 YP_006295440.1 CDS Q7A_953 NC_017857.1 965883 966542 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase complement(965883..966542) Methylophaga nitratireducenticrescens 12846552 YP_006295441.1 CDS Q7A_954 NC_017857.1 966542 967243 R PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(966542..967243) Methylophaga nitratireducenticrescens 12846553 YP_006295442.1 CDS Q7A_955 NC_017857.1 967240 968559 R PFAM: Amidohydrolase family; S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase complement(967240..968559) Methylophaga nitratireducenticrescens 12846554 YP_006295443.1 CDS Q7A_956 NC_017857.1 968597 969649 D PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; Methylthioribose-1-phosphate isomerase 968597..969649 Methylophaga nitratireducenticrescens 12846555 YP_006295444.1 CDS Q7A_957 NC_017857.1 969660 970334 D PFAM: short chain dehydrogenase; short-chain dehydrogenase 969660..970334 Methylophaga nitratireducenticrescens 12846556 YP_006295445.1 CDS Q7A_958 NC_017857.1 970328 971221 D PFAM: Phosphotransferase enzyme family; phosphotransferase family protein 970328..971221 Methylophaga nitratireducenticrescens 12846557 YP_006295446.1 CDS Q7A_959 NC_017857.1 971218 971841 R PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PnuC-like transporter linked to Choline/ethanolamine kinase and OMR complement(971218..971841) Methylophaga nitratireducenticrescens 12846558 YP_006295447.1 CDS Q7A_960 NC_017857.1 971841 972098 R PFAM: YKOF-related Family; YKOF-like protein complement(971841..972098) Methylophaga nitratireducenticrescens 12846559 YP_006295448.1 CDS Q7A_961 NC_017857.1 972120 974186 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor complement(972120..974186) Methylophaga nitratireducenticrescens 12846560 YP_006295449.1 CDS Q7A_962 NC_017857.1 974465 975034 R PFAM: Polyketide cyclase / dehydrase and lipid transport; polyketide cyclase/dehydrase and lipid transport complement(974465..975034) Methylophaga nitratireducenticrescens 12846561 YP_006295450.1 CDS Q7A_963 NC_017857.1 975122 976042 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; cys regulon transcriptional activator CysB complement(975122..976042) Methylophaga nitratireducenticrescens 12846562 YP_006295451.1 CDS Q7A_964 NC_017857.1 976124 976474 R hypothetical protein complement(976124..976474) Methylophaga nitratireducenticrescens 12846563 YP_006295452.1 CDS Q7A_965 NC_017857.1 976728 977528 D PFAM: Sulfite exporter TauE/SafE; sulfate permease 976728..977528 Methylophaga nitratireducenticrescens 12846564 YP_006295453.1 CDS Q7A_966 NC_017857.1 977559 978257 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenylyl-sulfate reductase (thioredoxin) / Adenylyl-sulfate reductase (thioredoxin) 977559..978257 Methylophaga nitratireducenticrescens 12846565 YP_006295454.1 CDS Q7A_967 NC_017857.1 978270 979172 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase 978270..979172 Methylophaga nitratireducenticrescens 12846566 YP_006295455.1 CDS Q7A_968 NC_017857.1 979287 980717 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase 979287..980717 Methylophaga nitratireducenticrescens 12846567 YP_006295456.1 CDS Q7A_969 NC_017857.1 980796 980912 D hypothetical protein 980796..980912 Methylophaga nitratireducenticrescens 12846568 YP_006295457.1 CDS Q7A_970 NC_017857.1 980994 981764 D PFAM: EAL domain; hypothetical protein 980994..981764 Methylophaga nitratireducenticrescens 12846569 YP_006295458.1 CDS Q7A_971 NC_017857.1 981744 982298 R PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific uracil/thymine DNA-glycosylase complement(981744..982298) Methylophaga nitratireducenticrescens 12846570 YP_006295459.1 CDS Q7A_972 NC_017857.1 982303 982746 R PFAM: Protein of unknown function (DUF3465); hypothetical protein complement(982303..982746) Methylophaga nitratireducenticrescens 12846571 YP_006295460.1 CDS Q7A_973 NC_017857.1 983100 983258 R hypothetical protein complement(983100..983258) Methylophaga nitratireducenticrescens 12846572 YP_006295461.1 CDS Q7A_974 NC_017857.1 983491 985149 D PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; sulfite reductase (NADPH) hemoprotein beta-component 983491..985149 Methylophaga nitratireducenticrescens 12846573 YP_006295462.1 CDS Q7A_975 NC_017857.1 985133 985615 D PFAM: Bacterial protein of unknown function (DUF934); Oxidoreductase 985133..985615 Methylophaga nitratireducenticrescens 12846574 YP_006295463.1 CDS Q7A_976 NC_017857.1 985628 986503 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); bis(5'-nucleosyl)-tetraphosphatase 985628..986503 Methylophaga nitratireducenticrescens 12846575 YP_006295464.1 CDS Q7A_977 NC_017857.1 986573 987055 D PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 986573..987055 Methylophaga nitratireducenticrescens 12846576 YP_006295465.1 CDS Q7A_978 NC_017857.1 987056 987517 D PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription termination protein NusB 987056..987517 Methylophaga nitratireducenticrescens 12846577 YP_006295466.1 CDS Q7A_979 NC_017857.1 987565 988539 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase 987565..988539 Methylophaga nitratireducenticrescens 12846578 YP_006295467.1 CDS Q7A_980 NC_017857.1 988523 989011 D PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 988523..989011 Methylophaga nitratireducenticrescens 12846579 YP_006295468.1 CDS Q7A_981 NC_017857.1 989053 989988 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(989053..989988) Methylophaga nitratireducenticrescens 12846580 YP_006295469.1 CDS Q7A_982 NC_017857.1 989993 991141 R PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D; ribonuclease D complement(989993..991141) Methylophaga nitratireducenticrescens 12846581 YP_006295470.1 CDS Q7A_983 NC_017857.1 991178 992068 R hydrolase complement(991178..992068) Methylophaga nitratireducenticrescens 12846582 YP_006295471.1 CDS Q7A_984 NC_017857.1 992122 992373 R PFAM: Glutaredoxin-like domain (DUF836); glutaredoxin-like protein complement(992122..992373) Methylophaga nitratireducenticrescens 12846583 YP_006295472.1 CDS Q7A_985 NC_017857.1 992370 992885 R PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein MoaB complement(992370..992885) Methylophaga nitratireducenticrescens 12846584 YP_006295473.1 CDS Q7A_986 NC_017857.1 992981 993661 D PFAM: Rickettsia 17 kDa surface antigen; OmpA family; outer membrane protein A precursor 992981..993661 Methylophaga nitratireducenticrescens 12846585 YP_006295474.1 CDS Q7A_987 NC_017857.1 993699 994427 D PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB 993699..994427 Methylophaga nitratireducenticrescens 12846586 YP_006295475.1 CDS Q7A_988 NC_017857.1 994531 994875 D PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 994531..994875 Methylophaga nitratireducenticrescens 12846587 YP_006295476.1 CDS Q7A_989 NC_017857.1 994891 995118 D PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 994891..995118 Methylophaga nitratireducenticrescens 12846588 YP_006295477.1 CDS Q7A_990 NC_017857.1 995156 996064 D hypothetical protein 995156..996064 Methylophaga nitratireducenticrescens 12846589 YP_006295478.1 CDS Q7A_991 NC_017857.1 996113 996658 D PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 996113..996658 Methylophaga nitratireducenticrescens 12846590 YP_006295479.1 CDS Q7A_992 NC_017857.1 996764 998176 D PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase; replicative DNA helicase 996764..998176 Methylophaga nitratireducenticrescens 12846591 YP_006295480.1 CDS Q7A_993 NC_017857.1 998173 999261 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 998173..999261 Methylophaga nitratireducenticrescens 12846592 YP_006295481.1 CDS Q7A_994 NC_017857.1 999254 1000642 D PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 999254..1000642 Methylophaga nitratireducenticrescens 12846593 YP_006295482.1 CDS Q7A_995 NC_017857.1 1000653 1001030 R PFAM: PilZ domain; type IV pilus assembly PilZ complement(1000653..1001030) Methylophaga nitratireducenticrescens 12846594 YP_006295483.1 CDS Q7A_996 NC_017857.1 1001093 1001518 D PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; hypothetical protein 1001093..1001518 Methylophaga nitratireducenticrescens 12846595 YP_006295484.1 CDS Q7A_997 NC_017857.1 1001556 1002128 R PFAM: Putative phospholipid-binding domain; hemolysin complement(1001556..1002128) Methylophaga nitratireducenticrescens 12846596 YP_006295485.1 CDS Q7A_998 NC_017857.1 1002167 1002523 R PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; endonuclease complement(1002167..1002523) Methylophaga nitratireducenticrescens 12846597 YP_006295486.1 CDS Q7A_999 NC_017857.1 1002529 1004394 R PFAM: LppC putative lipoprotein; LppC putative lipoprotein complement(1002529..1004394) Methylophaga nitratireducenticrescens 12846598 YP_006295487.1 CDS Q7A_1000 NC_017857.1 1004487 1005332 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; rRNA small subunit methyltransferase I 1004487..1005332 Methylophaga nitratireducenticrescens 12846599 YP_006295488.1 CDS Q7A_1001 NC_017857.1 1006141 1006758 D PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family; transcriptional regulator 1006141..1006758 Methylophaga nitratireducenticrescens 12846600 YP_006295489.1 CDS Q7A_1002 NC_017857.1 1006755 1008095 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein 1006755..1008095 Methylophaga nitratireducenticrescens 12846601 YP_006295490.1 CDS Q7A_1003 NC_017857.1 1008092 1011196 D PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 1008092..1011196 Methylophaga nitratireducenticrescens 12846602 YP_006295491.1 CDS Q7A_1004 NC_017857.1 1011245 1011724 D PFAM: Bacterial domain of unknown function (DUF403); Cytochrome C'; cytochrome C'' 1011245..1011724 Methylophaga nitratireducenticrescens 12846603 YP_006295492.1 CDS Q7A_1005 NC_017857.1 1011942 1012826 D PFAM: Transposase DDE domain; transposase, IS982 family 1011942..1012826 Methylophaga nitratireducenticrescens 12846604 YP_006295493.1 CDS Q7A_1006 NC_017857.1 1012875 1014176 D PFAM: Transposase; Il-IS_2, transposase 1012875..1014176 Methylophaga nitratireducenticrescens 12846605 YP_006295494.1 CDS Q7A_1007 NC_017857.1 1014484 1014936 D PFAM: MraZ protein; TIGRFAM: mraZ protein; cell division protein MraZ 1014484..1014936 Methylophaga nitratireducenticrescens 12846606 YP_006295495.1 CDS Q7A_1008 NC_017857.1 1014946 1015884 D PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; rRNA small subunit methyltransferase H 1014946..1015884 Methylophaga nitratireducenticrescens 12846607 YP_006295496.1 CDS Q7A_1009 NC_017857.1 1015881 1016174 D PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; cell division protein FtsL 1015881..1016174 Methylophaga nitratireducenticrescens 12846608 YP_006295497.1 CDS Q7A_1010 NC_017857.1 1016171 1017880 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI (Peptidoglycan synthetase) 1016171..1017880 Methylophaga nitratireducenticrescens 12846609 YP_006295498.1 CDS Q7A_1011 NC_017857.1 1017877 1019397 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1017877..1019397 Methylophaga nitratireducenticrescens 12846610 YP_006295499.1 CDS Q7A_1012 NC_017857.1 1019394 1020746 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1019394..1020746 Methylophaga nitratireducenticrescens 12846611 YP_006295500.1 CDS Q7A_1013 NC_017857.1 1020746 1021828 D PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 1020746..1021828 Methylophaga nitratireducenticrescens 12846612 YP_006295501.1 CDS Q7A_1014 NC_017857.1 1021825 1023180 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1021825..1023180 Methylophaga nitratireducenticrescens 12846613 YP_006295502.1 CDS Q7A_1015 NC_017857.1 1023177 1024316 D PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein FtsW 1023177..1024316 Methylophaga nitratireducenticrescens 12846614 YP_006295503.1 CDS Q7A_1016 NC_017857.1 1024313 1025392 D PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphoryl- undecaprenol N-acetylglucosamine transferase; glycosyltransferase 1024313..1025392 Methylophaga nitratireducenticrescens 12846615 YP_006295504.1 CDS Q7A_1017 NC_017857.1 1025385 1026803 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1025385..1026803 Methylophaga nitratireducenticrescens 12846616 YP_006295505.1 CDS Q7A_1018 NC_017857.1 1026803 1027693 D PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 1026803..1027693 Methylophaga nitratireducenticrescens 12846617 YP_006295506.1 CDS Q7A_1019 NC_017857.1 1027690 1028628 D PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1027690..1028628 Methylophaga nitratireducenticrescens 12846618 YP_006295507.1 CDS Q7A_1020 NC_017857.1 1028628 1029413 D PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type; cell division protein FtsQ 1028628..1029413 Methylophaga nitratireducenticrescens 12846619 YP_006295508.1 CDS Q7A_1021 NC_017857.1 1029413 1030663 D PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA 1029413..1030663 Methylophaga nitratireducenticrescens 12846620 YP_006295509.1 CDS Q7A_1022 NC_017857.1 1030700 1031860 D PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ 1030700..1031860 Methylophaga nitratireducenticrescens 12846621 YP_006295510.1 CDS Q7A_1023 NC_017857.1 1031933 1032850 D PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 1031933..1032850 Methylophaga nitratireducenticrescens 12846622 YP_006295511.1 CDS Q7A_1024 NC_017857.1 1032847 1033299 R PFAM: Protein of unknown function (DUF721); hypothetical protein complement(1032847..1033299) Methylophaga nitratireducenticrescens 12846623 YP_006295512.1 CDS Q7A_1025 NC_017857.1 1033448 1034245 D PFAM: Peptidase family M23; peptidase 1033448..1034245 Methylophaga nitratireducenticrescens 12846624 YP_006295513.1 CDS Q7A_1026 NC_017857.1 1034382 1037087 D PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein export cytoplasm protein SecA ATPase RNA helicase 1034382..1037087 Methylophaga nitratireducenticrescens 12846625 YP_006295514.1 CDS Q7A_1027 NC_017857.1 1037087 1038313 D PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase / N-acetylglutamate synthase 1037087..1038313 Methylophaga nitratireducenticrescens 12846626 YP_006295515.1 CDS Q7A_1028 NC_017857.1 1038399 1039379 D PFAM: Protein of unknown function (DUF3549); hypothetical protein 1038399..1039379 Methylophaga nitratireducenticrescens 12846627 YP_006295516.1 CDS Q7A_1029 NC_017857.1 1039382 1039933 R PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein complement(1039382..1039933) Methylophaga nitratireducenticrescens 12846628 YP_006295517.1 CDS Q7A_1030 NC_017857.1 1039917 1040480 R PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(1039917..1040480) Methylophaga nitratireducenticrescens 12846629 YP_006295518.1 CDS Q7A_1031 NC_017857.1 1040477 1041118 R PFAM: 2OG-Fe(II) oxygenase superfamily; SM-20-like protein complement(1040477..1041118) Methylophaga nitratireducenticrescens 12846630 YP_006295519.1 CDS Q7A_1032 NC_017857.1 1041280 1042509 R PFAM: Nucleoside recognition; Fused spore maturation proteins A and B complement(1041280..1042509) Methylophaga nitratireducenticrescens 12846631 YP_006295520.1 CDS Q7A_1033 NC_017857.1 1042585 1044393 R PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; cold-shock DEAD-box protein A complement(1042585..1044393) Methylophaga nitratireducenticrescens 12847190 YP_006295521.1 CDS Q7A_1034 NC_017857.1 1044578 1045396 D PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; TC 2.A.44 family; formate efflux transporter 1044578..1045396 Methylophaga nitratireducenticrescens 12847191 YP_006295522.1 CDS Q7A_1035 NC_017857.1 1045409 1045618 D PFAM: Protein of unknown function (DUF1458); Dodecin Flavin-binding protein 1045409..1045618 Methylophaga nitratireducenticrescens 12847192 YP_006295523.1 CDS Q7A_1036 NC_017857.1 1045631 1046194 R PFAM: Family of unknown function (DUF500); hypothetical protein complement(1045631..1046194) Methylophaga nitratireducenticrescens 12847193 YP_006295524.1 CDS Q7A_1037 NC_017857.1 1046307 1047905 R PFAM: ABC transporter; ABC transporter ATP-binding protein uup complement(1046307..1047905) Methylophaga nitratireducenticrescens 12847194 YP_006295525.1 CDS Q7A_1038 NC_017857.1 1047960 1048229 R PFAM: GIY-YIG catalytic domain; endonuclease complement(1047960..1048229) Methylophaga nitratireducenticrescens 12847195 YP_006295526.1 CDS Q7A_1039 NC_017857.1 1048216 1048620 R PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase MsrB complement(1048216..1048620) Methylophaga nitratireducenticrescens 12847196 YP_006295527.1 CDS Q7A_1040 NC_017857.1 1048728 1052147 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; sensor histidine kinase/response regulator complement(1048728..1052147) Methylophaga nitratireducenticrescens 12847197 YP_006295528.1 CDS Q7A_1041 NC_017857.1 1052227 1053276 R PFAM: HD domain; Response regulator receiver domain; response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase complement(1052227..1053276) Methylophaga nitratireducenticrescens 12847198 YP_006295529.1 CDS Q7A_1042 NC_017857.1 1053676 1054359 D PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 1053676..1054359 Methylophaga nitratireducenticrescens 12847199 YP_006295530.1 CDS Q7A_1043 NC_017857.1 1054437 1056332 D PFAM: ABC transporter; glutathione-regulated potassium-efflux system ATP-binding protein 1054437..1056332 Methylophaga nitratireducenticrescens 12847200 YP_006295531.1 CDS Q7A_1044 NC_017857.1 1056336 1058228 D PFAM: ABC transporter; ABC transporter ATP-binding protein 1056336..1058228 Methylophaga nitratireducenticrescens 12847201 YP_006295532.1 CDS Q7A_1045 NC_017857.1 1058302 1059066 R elongation factor-1 alpha complement(1058302..1059066) Methylophaga nitratireducenticrescens 12847202 YP_006295533.1 CDS Q7A_1046 NC_017857.1 1059130 1059885 R hypothetical protein complement(1059130..1059885) Methylophaga nitratireducenticrescens 12847203 YP_006295534.1 CDS Q7A_1047 NC_017857.1 1060029 1060238 R PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein complement(1060029..1060238) Methylophaga nitratireducenticrescens 12847204 YP_006295535.1 CDS Q7A_1048 NC_017857.1 1060534 1060800 R PFAM: Bacterial Fe(2+) trafficking; Fe(2+)-trafficking-like protein complement(1060534..1060800) Methylophaga nitratireducenticrescens 12847205 YP_006295536.1 CDS Q7A_1049 NC_017857.1 1060955 1061845 R PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase complement(1060955..1061845) Methylophaga nitratireducenticrescens 12847206 YP_006295537.1 CDS Q7A_1050 NC_017857.1 1061898 1064363 R PFAM: AsmA family; A/G-specific adenine glycosylase complement(1061898..1064363) Methylophaga nitratireducenticrescens 12847207 YP_006295538.1 CDS Q7A_1051 NC_017857.1 1064423 1066354 R hypothetical protein complement(1064423..1066354) Methylophaga nitratireducenticrescens 12847208 YP_006295539.1 CDS Q7A_1052 NC_017857.1 1066356 1067639 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(1066356..1067639) Methylophaga nitratireducenticrescens 12847209 YP_006295540.1 CDS Q7A_1053 NC_017857.1 1067644 1068441 R PFAM: Cytochrome C assembly protein; CcsA-like protein complement(1067644..1068441) Methylophaga nitratireducenticrescens 12847210 YP_006295541.1 CDS Q7A_1054 NC_017857.1 1068652 1070022 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; Signal recognition particle subunit Ffh SRP54 1068652..1070022 Methylophaga nitratireducenticrescens 12847211 YP_006295542.1 CDS Q7A_1055 NC_017857.1 1070124 1070357 D PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 1070124..1070357 Methylophaga nitratireducenticrescens 12847212 YP_006295543.1 CDS Q7A_1056 NC_017857.1 1070379 1070900 D PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 1070379..1070900 Methylophaga nitratireducenticrescens 12847213 YP_006295544.1 CDS Q7A_1057 NC_017857.1 1070910 1071653 D PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N1) -methyltransferase 1070910..1071653 Methylophaga nitratireducenticrescens 12847214 YP_006295545.1 CDS Q7A_1058 NC_017857.1 1071667 1072011 D PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 1071667..1072011 Methylophaga nitratireducenticrescens 12847215 YP_006295546.1 CDS Q7A_1059 NC_017857.1 1072127 1073032 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerD 1072127..1073032 Methylophaga nitratireducenticrescens 12847216 YP_006295547.1 CDS Q7A_1060 NC_017857.1 1073101 1073586 D PFAM: Protein of unknown function (DUF520); hypothetical protein 1073101..1073586 Methylophaga nitratireducenticrescens 12847217 YP_006295548.1 CDS Q7A_1061 NC_017857.1 1073599 1074318 D PFAM: Disulfide bond isomerase protein N-terminus; thiol:disulfide interchange protein DsbC 1073599..1074318 Methylophaga nitratireducenticrescens 12847218 YP_006295549.1 CDS Q7A_1062 NC_017857.1 1074315 1075067 R TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase complement(1074315..1075067) Methylophaga nitratireducenticrescens 12847219 YP_006295550.1 CDS Q7A_1063 NC_017857.1 1075085 1075666 R PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase ppiB complement(1075085..1075666) Methylophaga nitratireducenticrescens 12847220 YP_006295551.1 CDS Q7A_1064 NC_017857.1 1075832 1077499 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1075832..1077499 Methylophaga nitratireducenticrescens 12847221 YP_006295552.1 CDS Q7A_1065 NC_017857.1 1077575 1078885 D PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 1077575..1078885 Methylophaga nitratireducenticrescens 12847222 YP_006295553.1 CDS Q7A_1066 NC_017857.1 1079042 1080238 D PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase 1079042..1080238 Methylophaga nitratireducenticrescens 12847223 YP_006295554.1 CDS Q7A_1067 NC_017857.1 1080252 1082633 D PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain; Xylulose-5-phosphate phosphoketolase, Fructose-6-phosphate phosphoketolase 1080252..1082633 Methylophaga nitratireducenticrescens 12847224 YP_006295555.1 CDS Q7A_1068 NC_017857.1 1082679 1083533 R PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase complement(1082679..1083533) Methylophaga nitratireducenticrescens 12847225 YP_006295556.1 CDS Q7A_1069 NC_017857.1 1083741 1085387 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone/plastoquinone (complex I) oxidoreductase complement(1083741..1085387) Methylophaga nitratireducenticrescens 12847226 YP_006295557.1 CDS Q7A_1070 NC_017857.1 1085384 1086901 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase subunit L complement(1085384..1086901) Methylophaga nitratireducenticrescens 12847227 YP_006295558.1 CDS Q7A_1071 NC_017857.1 1086901 1088322 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; hydrogenase-4 component B / Formate hydrogenlyase subunit 3 complement(1086901..1088322) Methylophaga nitratireducenticrescens 12847228 YP_006295559.1 CDS Q7A_1072 NC_017857.1 1088319 1088603 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase, subunit 4L complement(1088319..1088603) Methylophaga nitratireducenticrescens 12847229 YP_006295560.1 CDS Q7A_1073 NC_017857.1 1088603 1089502 R PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B complement(1088603..1089502) Methylophaga nitratireducenticrescens 12847230 YP_006295561.1 CDS Q7A_1074 NC_017857.1 1089492 1089788 R PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; multisubunit Na+/H+ antiporter subunit MnhG complement(1089492..1089788) Methylophaga nitratireducenticrescens 12847231 YP_006295562.1 CDS Q7A_1075 NC_017857.1 1089781 1090035 R PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); multiple resistance and pH regulation protein F complement(1089781..1090035) Methylophaga nitratireducenticrescens 12847232 YP_006295563.1 CDS Q7A_1076 NC_017857.1 1090301 1090519 R hypothetical protein complement(1090301..1090519) Methylophaga nitratireducenticrescens 12847233 YP_006295564.1 CDS Q7A_1079 NC_017857.1 1091276 1092367 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1091276..1092367 Methylophaga nitratireducenticrescens 12847236 YP_006295565.1 CDS Q7A_1080 NC_017857.1 1092364 1093245 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 1092364..1093245 Methylophaga nitratireducenticrescens 12847237 YP_006295566.1 CDS Q7A_1081 NC_017857.1 1093245 1093790 D PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 1093245..1093790 Methylophaga nitratireducenticrescens 12847238 YP_006295567.1 CDS Q7A_1082 NC_017857.1 1093791 1094663 D PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1093791..1094663 Methylophaga nitratireducenticrescens 12847239 YP_006295568.1 CDS Q7A_1083 NC_017857.1 1094712 1096670 D PFAM: Polysaccharide biosynthesis protein; Nucleoside-diphosphate sugar epimerase/dehydratase 1094712..1096670 Methylophaga nitratireducenticrescens 12847240 YP_006295569.1 CDS Q7A_1084 NC_017857.1 1096680 1097858 D PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; UDP-glucose dehydrogenase 1096680..1097858 Methylophaga nitratireducenticrescens 12847241 YP_006295570.1 CDS Q7A_1085 NC_017857.1 1097973 1099871 D PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 1097973..1099871 Methylophaga nitratireducenticrescens 12847242 YP_006295571.1 CDS Q7A_1086 NC_017857.1 1099955 1100293 D PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family; transcriptional regulator 1099955..1100293 Methylophaga nitratireducenticrescens 12847243 YP_006295572.1 CDS Q7A_1087 NC_017857.1 1100395 1101567 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Aminotransferase 1100395..1101567 Methylophaga nitratireducenticrescens 12847244 YP_006295573.1 CDS Q7A_1088 NC_017857.1 1101582 1102268 D PFAM: WbqC-like protein family; WbqC-like protein 1101582..1102268 Methylophaga nitratireducenticrescens 12847245 YP_006295574.1 CDS Q7A_1089 NC_017857.1 1102273 1103244 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: intein N-terminal splicing region; UDP-glucose 4-epimerase 1102273..1103244 Methylophaga nitratireducenticrescens 12847246 YP_006295575.1 CDS Q7A_1090 NC_017857.1 1103251 1104267 D hypothetical protein 1103251..1104267 Methylophaga nitratireducenticrescens 12847247 YP_006295576.1 CDS Q7A_1091 NC_017857.1 1104257 1104958 D hypothetical protein 1104257..1104958 Methylophaga nitratireducenticrescens 12847248 YP_006295577.1 CDS Q7A_1092 NC_017857.1 1104924 1106462 D PFAM: Polysaccharide biosynthesis protein; capsular polysaccharide repeat unit transporter 1104924..1106462 Methylophaga nitratireducenticrescens 12847249 YP_006295578.1 CDS Q7A_1093 NC_017857.1 1106464 1107399 D PFAM: Glycosyl transferase family 2; glycosyl transferase 1106464..1107399 Methylophaga nitratireducenticrescens 12847250 YP_006295579.1 CDS Q7A_1094 NC_017857.1 1108115 1109026 D PFAM: Glycosyl transferase family 2; glycosyltransferase 1108115..1109026 Methylophaga nitratireducenticrescens 12847251 YP_006295580.1 CDS Q7A_1095 NC_017857.1 1109083 1109832 D PFAM: Galactosyltransferase; Glycosyl transferase family 2; dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL 1109083..1109832 Methylophaga nitratireducenticrescens 12847252 YP_006295581.1 CDS Q7A_1096 NC_017857.1 1110006 1111457 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 1110006..1111457 Methylophaga nitratireducenticrescens 12847253 YP_006295582.1 CDS Q7A_1097 NC_017857.1 1111457 1112431 D PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1111457..1112431 Methylophaga nitratireducenticrescens 12847254 YP_006295583.1 CDS Q7A_1098 NC_017857.1 1112444 1113004 D PFAM: Bacterial sugar transferase; lipid carrier : UDP-N-acetylgalactosaminyltransferase 1112444..1113004 Methylophaga nitratireducenticrescens 12847255 YP_006295584.1 CDS Q7A_1099 NC_017857.1 1113339 1114304 D PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 1113339..1114304 Methylophaga nitratireducenticrescens 12847256 YP_006295585.1 CDS Q7A_1100 NC_017857.1 1114513 1116009 D hydrolase-like protein (HAD superfamily) 1114513..1116009 Methylophaga nitratireducenticrescens 12847257 YP_006295586.1 CDS Q7A_1101 NC_017857.1 1116226 1117149 D PFAM: HMGL-like; 4-hydroxy-2-oxovalerate aldolase 1116226..1117149 Methylophaga nitratireducenticrescens 12847258 YP_006295587.1 CDS Q7A_1102 NC_017857.1 1117600 1118337 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 1117600..1118337 Methylophaga nitratireducenticrescens 12847259 YP_006295588.1 CDS Q7A_1103 NC_017857.1 1118334 1118999 D haloacid dehalogenase-like hydrolase 1118334..1118999 Methylophaga nitratireducenticrescens 12847260 YP_006295589.1 CDS Q7A_1104 NC_017857.1 1118996 1120141 D PFAM: Glycosyl transferases group 1; glycosyltransferase 1118996..1120141 Methylophaga nitratireducenticrescens 12847261 YP_006295590.1 CDS Q7A_1105 NC_017857.1 1120150 1120992 D TIGRFAM: methyltransferase, FkbM family; methyltransferase 1120150..1120992 Methylophaga nitratireducenticrescens 12847262 YP_006295591.1 CDS Q7A_1106 NC_017857.1 1121311 1122354 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 1121311..1122354 Methylophaga nitratireducenticrescens 12847263 YP_006295592.1 CDS Q7A_1107 NC_017857.1 1122488 1123330 D PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1122488..1123330 Methylophaga nitratireducenticrescens 12847264 YP_006295593.1 CDS Q7A_1108 NC_017857.1 1123338 1124471 D PFAM: Glycosyl transferases group 1; glycosyl transferase 1123338..1124471 Methylophaga nitratireducenticrescens 12847265 YP_006295594.1 CDS Q7A_1109 NC_017857.1 1124599 1125603 D PFAM: Glycosyl transferases group 1; glycosyltransferase 1124599..1125603 Methylophaga nitratireducenticrescens 12847266 YP_006295595.1 CDS Q7A_1110 NC_017857.1 1125627 1126337 R PFAM: ABC transporter; Teichoic acid export ATP-binding protein TagH complement(1125627..1126337) Methylophaga nitratireducenticrescens 12847267 YP_006295596.1 CDS Q7A_1111 NC_017857.1 1126334 1127713 R PFAM: ABC-2 type transporter; O-antigen export system permease protein RfbD complement(1126334..1127713) Methylophaga nitratireducenticrescens 12847268 YP_006295597.1 CDS Q7A_1112 NC_017857.1 1127942 1128067 D hypothetical protein 1127942..1128067 Methylophaga nitratireducenticrescens 12847269 YP_006295598.1 CDS Q7A_1113 NC_017857.1 1128145 1128747 D PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); adenylylsulfate kinase 1128145..1128747 Methylophaga nitratireducenticrescens 12847270 YP_006295599.1 CDS Q7A_1114 NC_017857.1 1128754 1129713 D hypothetical protein 1128754..1129713 Methylophaga nitratireducenticrescens 12847271 YP_006295600.1 CDS Q7A_1115 NC_017857.1 1129840 1130106 D TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; late competence protein ComEA, DNA receptor 1129840..1130106 Methylophaga nitratireducenticrescens 12847272 YP_006295601.1 CDS Q7A_1116 NC_017857.1 1130617 1131126 D PFAM: LAGLIDADG endonuclease; LAGLIDADG endonuclease 1130617..1131126 Methylophaga nitratireducenticrescens 12847273 YP_006295602.1 CDS Q7A_1117 NC_017857.1 1131186 1132274 D PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent protease La 1131186..1132274 Methylophaga nitratireducenticrescens 12847274 YP_006295603.1 CDS Q7A_1118 NC_017857.1 1132332 1132679 D hypothetical protein 1132332..1132679 Methylophaga nitratireducenticrescens 12847275 YP_006295604.1 CDS Q7A_1119 NC_017857.1 1133362 1134894 R PFAM: Transposase IS66 family; transposase complement(1133362..1134894) Methylophaga nitratireducenticrescens 12847276 YP_006295605.1 CDS Q7A_1120 NC_017857.1 1134945 1135289 R PFAM: IS66 Orf2 like protein; transposase complement(1134945..1135289) Methylophaga nitratireducenticrescens 12847277 YP_006295606.1 CDS Q7A_1121 NC_017857.1 1135286 1135645 R PFAM: Transposase; transposase complement(1135286..1135645) Methylophaga nitratireducenticrescens 12847278 YP_006295607.1 CDS Q7A_1124 NC_017857.1 1136994 1137425 R hypothetical protein complement(1136994..1137425) Methylophaga nitratireducenticrescens 12847280 YP_006295608.1 CDS Q7A_1125 NC_017857.1 1138486 1139169 D hypothetical protein 1138486..1139169 Methylophaga nitratireducenticrescens 12847281 YP_006295609.1 CDS Q7A_1126 NC_017857.1 1139198 1141798 R PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; (Protein-PII) uridylyltransferase complement(1139198..1141798) Methylophaga nitratireducenticrescens 12847282 YP_006295610.1 CDS Q7A_1127 NC_017857.1 1141811 1142578 R PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(1141811..1142578) Methylophaga nitratireducenticrescens 12847283 YP_006295611.1 CDS Q7A_1128 NC_017857.1 1142840 1143592 D PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 1142840..1143592 Methylophaga nitratireducenticrescens 12847284 YP_006295612.1 CDS Q7A_1129 NC_017857.1 1143697 1144578 D PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 1143697..1144578 Methylophaga nitratireducenticrescens 12847285 YP_006295613.1 CDS Q7A_1130 NC_017857.1 1144581 1145306 D PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 1144581..1145306 Methylophaga nitratireducenticrescens 12847286 YP_006295614.1 CDS Q7A_1131 NC_017857.1 1145315 1145872 D PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 1145315..1145872 Methylophaga nitratireducenticrescens 12847287 YP_006295615.1 CDS Q7A_1132 NC_017857.1 1145941 1146630 D PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl pyrophosphate synthetase 1145941..1146630 Methylophaga nitratireducenticrescens 12847288 YP_006295616.1 CDS Q7A_1133 NC_017857.1 1146632 1147456 D PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase 1146632..1147456 Methylophaga nitratireducenticrescens 12847289 YP_006295617.1 CDS Q7A_1134 NC_017857.1 1147456 1148646 D PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1147456..1148646 Methylophaga nitratireducenticrescens 12847290 YP_006295618.1 CDS Q7A_1135 NC_017857.1 1148634 1149971 D PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; membrane-associated zinc metalloprotease 1148634..1149971 Methylophaga nitratireducenticrescens 12847291 YP_006295619.1 CDS Q7A_1136 NC_017857.1 1150028 1152304 D PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly factor YaeT precursor 1150028..1152304 Methylophaga nitratireducenticrescens 12847292 YP_006295620.1 CDS Q7A_1137 NC_017857.1 1152325 1152825 D PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone Skp (OmpH)-like protein 1152325..1152825 Methylophaga nitratireducenticrescens 12847293 YP_006295621.1 CDS Q7A_1138 NC_017857.1 1152839 1153852 D PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1152839..1153852 Methylophaga nitratireducenticrescens 12847294 YP_006295622.1 CDS Q7A_1139 NC_017857.1 1153949 1154398 D PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 1153949..1154398 Methylophaga nitratireducenticrescens 12847295 YP_006295623.1 CDS Q7A_1140 NC_017857.1 1154395 1155165 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 1154395..1155165 Methylophaga nitratireducenticrescens 12847296 YP_006295624.1 CDS Q7A_1141 NC_017857.1 1155201 1156340 R PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; Ammonium transporter complement(1155201..1156340) Methylophaga nitratireducenticrescens 12847297 YP_006295625.1 CDS Q7A_1142 NC_017857.1 1156682 1157323 D PFAM: Uncharacterized protein conserved in bacteria (DUF2133); hypothetical protein 1156682..1157323 Methylophaga nitratireducenticrescens 12847298 YP_006295626.1 CDS Q7A_1143 NC_017857.1 1157313 1158488 D PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL; outer membrane YfgL-like protein 1157313..1158488 Methylophaga nitratireducenticrescens 12847299 YP_006295627.1 CDS Q7A_1144 NC_017857.1 1158485 1159894 D PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein EngA 1158485..1159894 Methylophaga nitratireducenticrescens 12847300 YP_006295628.1 CDS Q7A_1145 NC_017857.1 1159992 1160330 R hypothetical protein complement(1159992..1160330) Methylophaga nitratireducenticrescens 12847301 YP_006295629.1 CDS Q7A_1146 NC_017857.1 1160456 1162636 D PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family; ABC transporter 1160456..1162636 Methylophaga nitratireducenticrescens 12847302 YP_006295630.1 CDS Q7A_1147 NC_017857.1 1162641 1163969 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD-like secretion protein 1162641..1163969 Methylophaga nitratireducenticrescens 12847303 YP_006295631.1 CDS Q7A_1148 NC_017857.1 1163985 1164635 D PFAM: Bacterial regulatory proteins, luxR family; two-component response regulator 1163985..1164635 Methylophaga nitratireducenticrescens 12847304 YP_006295632.1 CDS Q7A_1149 NC_017857.1 1164804 1166093 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein 1164804..1166093 Methylophaga nitratireducenticrescens 12847305 YP_006295633.1 CDS Q7A_1150 NC_017857.1 1166297 1166755 D PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA; 3-hydroxydecanoyl-ACP dehydratase 1166297..1166755 Methylophaga nitratireducenticrescens 12847306 YP_006295634.1 CDS Q7A_1151 NC_017857.1 1166765 1167982 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 1166765..1167982 Methylophaga nitratireducenticrescens 12847307 YP_006295635.1 CDS Q7A_1152 NC_017857.1 1168026 1168178 R hypothetical protein complement(1168026..1168178) Methylophaga nitratireducenticrescens 12847308 YP_006295636.1 CDS Q7A_1153 NC_017857.1 1168583 1169347 D alpha/beta fold family hydrolase 1168583..1169347 Methylophaga nitratireducenticrescens 12847309 YP_006295637.1 CDS Q7A_1154 NC_017857.1 1169340 1169690 D PFAM: MazG nucleotide pyrophosphohydrolase domain; pyrophosphatase 1169340..1169690 Methylophaga nitratireducenticrescens 12847310 YP_006295638.1 CDS Q7A_1155 NC_017857.1 1169751 1170608 D PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 1169751..1170608 Methylophaga nitratireducenticrescens 12847311 YP_006295639.1 CDS Q7A_1156 NC_017857.1 1171001 1171762 D PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase 1171001..1171762 Methylophaga nitratireducenticrescens 12847312 YP_006295640.1 CDS Q7A_1157 NC_017857.1 1171932 1174061 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Zinc-regulated outer membrane receptor complement(1171932..1174061) Methylophaga nitratireducenticrescens 12847313 YP_006295641.1 CDS Q7A_1158 NC_017857.1 1174135 1174422 R hypothetical protein complement(1174135..1174422) Methylophaga nitratireducenticrescens 12847314 YP_006295642.1 CDS Q7A_1159 NC_017857.1 1174427 1175569 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; N-succinyl-L,L-diaminopimelate desuccinylase complement(1174427..1175569) Methylophaga nitratireducenticrescens 12847315 YP_006295643.1 CDS Q7A_1160 NC_017857.1 1175559 1175903 R PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; glutathione-dependent thiol reductase complement(1175559..1175903) Methylophaga nitratireducenticrescens 12847316 YP_006295644.1 CDS Q7A_1161 NC_017857.1 1176058 1176879 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase complement(1176058..1176879) Methylophaga nitratireducenticrescens 12847317 YP_006295645.1 CDS Q7A_1162 NC_017857.1 1176893 1178092 R PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase; N-succinyl-L,L-diaminopimelate aminotransferase alternative complement(1176893..1178092) Methylophaga nitratireducenticrescens 12847318 YP_006295646.1 CDS Q7A_1163 NC_017857.1 1178166 1179050 D PFAM: EamA-like transporter family; permease 1178166..1179050 Methylophaga nitratireducenticrescens 12847319 YP_006295647.1 CDS Q7A_1164 NC_017857.1 1179147 1179638 D dioxygenase 1179147..1179638 Methylophaga nitratireducenticrescens 12847320 YP_006295648.1 CDS Q7A_1165 NC_017857.1 1180447 1180563 D hypothetical protein 1180447..1180563 Methylophaga nitratireducenticrescens 12847321 YP_006295649.1 CDS Q7A_1166 NC_017857.1 1180743 1181609 R PFAM: PP-loop family; tRNA(Cytosine32)-2-thiocytidine synthetase complement(1180743..1181609) Methylophaga nitratireducenticrescens 12847322 YP_006295650.1 CDS Q7A_1167 NC_017857.1 1181609 1182874 R PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin biosynthesis protein MoeA complement(1181609..1182874) Methylophaga nitratireducenticrescens 12847323 YP_006295651.1 CDS Q7A_1168 NC_017857.1 1182867 1183982 R PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(1182867..1183982) Methylophaga nitratireducenticrescens 12847324 YP_006295652.1 CDS Q7A_1169 NC_017857.1 1184102 1184665 D PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 1184102..1184665 Methylophaga nitratireducenticrescens 12847325 YP_006295653.1 CDS Q7A_1170 NC_017857.1 1184783 1185592 R PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; GTP cyclohydrolase I type 2 complement(1184783..1185592) Methylophaga nitratireducenticrescens 12847326 YP_006295654.1 CDS Q7A_1171 NC_017857.1 1185601 1185897 R PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD complement(1185601..1185897) Methylophaga nitratireducenticrescens 12847327 YP_006295655.1 CDS Q7A_1172 NC_017857.1 1186029 1187864 R PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(1186029..1187864) Methylophaga nitratireducenticrescens 12847328 YP_006295656.1 CDS Q7A_1173 NC_017857.1 1187864 1188730 R PFAM: Polyprenyl synthetase; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase complement(1187864..1188730) Methylophaga nitratireducenticrescens 12847329 YP_006295657.1 CDS Q7A_1174 NC_017857.1 1188757 1189002 R PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit complement(1188757..1189002) Methylophaga nitratireducenticrescens 12847330 YP_006295658.1 CDS Q7A_1175 NC_017857.1 1189128 1190069 D PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin kinase / FMN adenylyltransferase 1189128..1190069 Methylophaga nitratireducenticrescens 12847331 YP_006295659.1 CDS Q7A_1176 NC_017857.1 1190078 1190302 R hypothetical protein complement(1190078..1190302) Methylophaga nitratireducenticrescens 12847332 YP_006295660.1 CDS Q7A_1177 NC_017857.1 1190305 1191351 R PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance; heat shock protein complement(1190305..1191351) Methylophaga nitratireducenticrescens 12847333 YP_006295661.1 CDS Q7A_1178 NC_017857.1 1191380 1191793 R PFAM: Transcription elongation factor, GreA/GreB, C-term; Regulator of nucleoside diphosphate kinase complement(1191380..1191793) Methylophaga nitratireducenticrescens 12847334 YP_006295662.1 CDS Q7A_1179 NC_017857.1 1191965 1192210 R hypothetical protein complement(1191965..1192210) Methylophaga nitratireducenticrescens 12847335 YP_006295663.1 CDS Q7A_1180 NC_017857.1 1192280 1194538 R PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein complement(1192280..1194538) Methylophaga nitratireducenticrescens 12847336 YP_006295664.1 CDS Q7A_1181 NC_017857.1 1194535 1194648 R hypothetical protein complement(1194535..1194648) Methylophaga nitratireducenticrescens 12847337 YP_006295665.1 CDS Q7A_1182 NC_017857.1 1194669 1195001 R PFAM: Small Multidrug Resistance protein; Ethidium bromide-methyl viologen resistance protein EmrE complement(1194669..1195001) Methylophaga nitratireducenticrescens 12847338 YP_006295666.1 CDS Q7A_1183 NC_017857.1 1195012 1195380 R PFAM: Domain of unknown function DUF; hypothetical protein complement(1195012..1195380) Methylophaga nitratireducenticrescens 12847339 YP_006295667.1 CDS Q7A_1184 NC_017857.1 1195384 1196025 R hypothetical protein complement(1195384..1196025) Methylophaga nitratireducenticrescens 12847340 YP_006295668.1 CDS Q7A_1185 NC_017857.1 1196236 1196976 D PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; ferredoxin--NADP(+) reductase 1196236..1196976 Methylophaga nitratireducenticrescens 12847341 YP_006295669.1 CDS Q7A_1186 NC_017857.1 1197213 1198391 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; N-acetyl-L,L-diaminopimelate deacetylase 1197213..1198391 Methylophaga nitratireducenticrescens 12847342 YP_006295670.1 CDS Q7A_1187 NC_017857.1 1198426 1199706 D PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; diaminobutyrate-pyruvate aminotransferase 1198426..1199706 Methylophaga nitratireducenticrescens 12847343 YP_006295671.1 CDS Q7A_1188 NC_017857.1 1199703 1200962 D PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro dipeptidase 1199703..1200962 Methylophaga nitratireducenticrescens 12847344 YP_006295672.1 CDS Q7A_1189 NC_017857.1 1200978 1202339 D PFAM: Aldehyde dehydrogenase family; succinate-semialdehyde dehydrogenase 1200978..1202339 Methylophaga nitratireducenticrescens 12847345 YP_006295673.1 CDS Q7A_1190 NC_017857.1 1202380 1202967 R PFAM: Protein of unknown function (DUF330); hypothetical protein complement(1202380..1202967) Methylophaga nitratireducenticrescens 12847346 YP_006295674.1 CDS Q7A_1191 NC_017857.1 1202980 1204650 R PFAM: mce related protein; Paraquat-inducible protein B complement(1202980..1204650) Methylophaga nitratireducenticrescens 12847347 YP_006295675.1 CDS Q7A_1192 NC_017857.1 1204643 1205983 R PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; Paraquat-inducible protein A complement(1204643..1205983) Methylophaga nitratireducenticrescens 12847348 YP_006295676.1 CDS Q7A_1193 NC_017857.1 1206017 1206136 D hypothetical protein 1206017..1206136 Methylophaga nitratireducenticrescens 12847349 YP_006295677.1 CDS Q7A_1194 NC_017857.1 1206125 1206238 R hypothetical protein complement(1206125..1206238) Methylophaga nitratireducenticrescens 12847350 YP_006295678.1 CDS Q7A_1195 NC_017857.1 1206266 1206508 D hypothetical protein 1206266..1206508 Methylophaga nitratireducenticrescens 12847351 YP_006295679.1 CDS Q7A_1196 NC_017857.1 1206569 1206910 R PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA complement(1206569..1206910) Methylophaga nitratireducenticrescens 12847352 YP_006295680.1 CDS Q7A_1197 NC_017857.1 1207038 1207361 R ArsR family transcriptional regulator complement(1207038..1207361) Methylophaga nitratireducenticrescens 12847353 YP_006295681.1 CDS Q7A_1198 NC_017857.1 1207463 1208449 D PFAM: Predicted permease; permease 1207463..1208449 Methylophaga nitratireducenticrescens 12847354 YP_006295682.1 CDS Q7A_1199 NC_017857.1 1208434 1208907 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(1208434..1208907) Methylophaga nitratireducenticrescens 12847355 YP_006295683.1 CDS Q7A_1200 NC_017857.1 1208904 1209296 R PFAM: YCII-related domain; hypothetical protein complement(1208904..1209296) Methylophaga nitratireducenticrescens 12847356 YP_006295684.1 CDS Q7A_1201 NC_017857.1 1209344 1210174 R PFAM: YCII-related domain; 3-demethylubiquinone-9 3-methyltransferase; phnB-like protein complement(1209344..1210174) Methylophaga nitratireducenticrescens 12847357 YP_006295685.1 CDS Q7A_1202 NC_017857.1 1210185 1210628 R PFAM: Calcium/calmodulin dependent protein kinase II Association; ketosteroid isomerase complement(1210185..1210628) Methylophaga nitratireducenticrescens 12847358 YP_006295686.1 CDS Q7A_1203 NC_017857.1 1211038 1211448 D PFAM: Bacterial type II secretion system protein G; N-terminal methylation 1211038..1211448 Methylophaga nitratireducenticrescens 12847359 YP_006295687.1 CDS Q7A_1204 NC_017857.1 1211464 1214313 D PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1211464..1214313 Methylophaga nitratireducenticrescens 12847360 YP_006295688.1 CDS Q7A_1205 NC_017857.1 1214310 1215533 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase complement(1214310..1215533) Methylophaga nitratireducenticrescens 12847361 YP_006295689.1 CDS Q7A_1206 NC_017857.1 1216152 1216814 R PFAM: NmrA-like family; NAD-dependent epimerase/dehydratase complement(1216152..1216814) Methylophaga nitratireducenticrescens 12847362 YP_006295690.1 CDS Q7A_1207 NC_017857.1 1216998 1217588 R hypothetical protein complement(1216998..1217588) Methylophaga nitratireducenticrescens 12847363 YP_006295691.1 CDS Q7A_1208 NC_017857.1 1217650 1218894 R PFAM: Major Facilitator Superfamily; permease complement(1217650..1218894) Methylophaga nitratireducenticrescens 12847364 YP_006295692.1 CDS Q7A_1209 NC_017857.1 1219142 1219534 R hypothetical protein complement(1219142..1219534) Methylophaga nitratireducenticrescens 12847365 YP_006295693.1 CDS Q7A_1210 NC_017857.1 1219758 1220456 R hypothetical protein complement(1219758..1220456) Methylophaga nitratireducenticrescens 12847366 YP_006295694.1 CDS Q7A_1211 NC_017857.1 1220615 1221151 D PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase-like protein 1220615..1221151 Methylophaga nitratireducenticrescens 12847367 YP_006295695.1 CDS Q7A_1212 NC_017857.1 1221365 1223686 D PFAM: Mechanosensitive ion channel; Putative modulator of DNA gyrase; Potassium efflux system KefA protein 1221365..1223686 Methylophaga nitratireducenticrescens 12847368 YP_006295696.1 CDS Q7A_1213 NC_017857.1 1223747 1224061 R hypothetical protein complement(1223747..1224061) Methylophaga nitratireducenticrescens 12847369 YP_006295697.1 CDS Q7A_1214 NC_017857.1 1224376 1224489 R hypothetical protein complement(1224376..1224489) Methylophaga nitratireducenticrescens 12847370 YP_006295698.1 CDS Q7A_1215 NC_017857.1 1224467 1224604 R hypothetical protein complement(1224467..1224604) Methylophaga nitratireducenticrescens 12847371 YP_006295699.1 CDS Q7A_1216 NC_017857.1 1224754 1226136 D PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase DbpA 1224754..1226136 Methylophaga nitratireducenticrescens 12847372 YP_006295700.1 CDS Q7A_1217 NC_017857.1 1226204 1227142 D PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; hypothetical protein 1226204..1227142 Methylophaga nitratireducenticrescens 12847373 YP_006295701.1 CDS Q7A_1218 NC_017857.1 1227139 1227837 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(1227139..1227837) Methylophaga nitratireducenticrescens 12847374 YP_006295702.1 CDS Q7A_1219 NC_017857.1 1227849 1228673 R PFAM: Sulfite exporter TauE/SafE; permease complement(1227849..1228673) Methylophaga nitratireducenticrescens 12847375 YP_006295703.1 CDS Q7A_1220 NC_017857.1 1228679 1228981 R PFAM: Protein of unknown function (DUF2892); hypothetical protein complement(1228679..1228981) Methylophaga nitratireducenticrescens 12847376 YP_006295704.1 CDS Q7A_1221 NC_017857.1 1229203 1229553 R PFAM: Bacterial regulatory protein, arsR family; transcriptional regulator complement(1229203..1229553) Methylophaga nitratireducenticrescens 12847377 YP_006295705.1 CDS Q7A_1222 NC_017857.1 1229719 1230213 R PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(1229719..1230213) Methylophaga nitratireducenticrescens 12847378 YP_006295706.1 CDS Q7A_1223 NC_017857.1 1230271 1230825 R PFAM: Uncharacterized protein family UPF0016; transmembrane protein complement(1230271..1230825) Methylophaga nitratireducenticrescens 12847379 YP_006295707.1 CDS Q7A_1224 NC_017857.1 1231090 1231590 R FIG01181932; hypothetical protein complement(1231090..1231590) Methylophaga nitratireducenticrescens 12847380 YP_006295708.1 CDS Q7A_1225 NC_017857.1 1231583 1232320 R PFAM: ThiF family; EC-YgdL-like protein complement(1231583..1232320) Methylophaga nitratireducenticrescens 12847381 YP_006295709.1 CDS Q7A_1226 NC_017857.1 1232441 1234489 R PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase complement(1232441..1234489) Methylophaga nitratireducenticrescens 12847382 YP_006295710.1 CDS Q7A_1227 NC_017857.1 1234479 1235441 R PFAM: Protein of unknown function DUF58; hypothetical protein complement(1234479..1235441) Methylophaga nitratireducenticrescens 12847383 YP_006295711.1 CDS Q7A_1228 NC_017857.1 1235441 1236352 R PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase complement(1235441..1236352) Methylophaga nitratireducenticrescens 12847384 YP_006295712.1 CDS Q7A_1229 NC_017857.1 1236447 1236740 D hypothetical protein 1236447..1236740 Methylophaga nitratireducenticrescens 12847385 YP_006295713.1 CDS Q7A_1230 NC_017857.1 1236741 1237505 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease complement(1236741..1237505) Methylophaga nitratireducenticrescens 12847386 YP_006295714.1 CDS Q7A_1231 NC_017857.1 1237540 1238001 D hypothetical protein 1237540..1238001 Methylophaga nitratireducenticrescens 12847387 YP_006295715.1 CDS Q7A_1232 NC_017857.1 1238006 1239676 R PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase complement(1238006..1239676) Methylophaga nitratireducenticrescens 12847388 YP_006295716.1 CDS Q7A_1233 NC_017857.1 1239673 1240671 R PFAM: Rhodanese-like domain; hypothetical protein complement(1239673..1240671) Methylophaga nitratireducenticrescens 12847389 YP_006295717.1 CDS Q7A_1234 NC_017857.1 1240800 1241213 D hypothetical protein 1240800..1241213 Methylophaga nitratireducenticrescens 12847390 YP_006295718.1 CDS Q7A_1235 NC_017857.1 1241215 1241793 R PFAM: Bacterial protein of unknown function (DUF882); hypothetical protein complement(1241215..1241793) Methylophaga nitratireducenticrescens 12847391 YP_006295719.1 CDS Q7A_1236 NC_017857.1 1241864 1242826 R PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease complement(1241864..1242826) Methylophaga nitratireducenticrescens 12847392 YP_006295720.1 CDS Q7A_1237 NC_017857.1 1242823 1243596 R PFAM: ABC transporter; ABC transporter ATPase complement(1242823..1243596) Methylophaga nitratireducenticrescens 12847393 YP_006295721.1 CDS Q7A_1238 NC_017857.1 1243589 1244506 R PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF complement(1243589..1244506) Methylophaga nitratireducenticrescens 12847394 YP_006295722.1 CDS Q7A_1239 NC_017857.1 1244573 1245109 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 1244573..1245109 Methylophaga nitratireducenticrescens 12847395 YP_006295723.1 CDS Q7A_1240 NC_017857.1 1245106 1245840 D PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase 1245106..1245840 Methylophaga nitratireducenticrescens 12847396 YP_006295724.1 CDS Q7A_1241 NC_017857.1 1245824 1246459 R PFAM: Protein of unknown function (DUF2803); hypothetical protein complement(1245824..1246459) Methylophaga nitratireducenticrescens 12847397 YP_006295725.1 CDS Q7A_1242 NC_017857.1 1246589 1247512 D PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit YbbK-like protein 1246589..1247512 Methylophaga nitratireducenticrescens 12847398 YP_006295726.1 CDS Q7A_1243 NC_017857.1 1247514 1247954 D PFAM: NfeD-like; activity regulator of membrane protease YbbK-like protein 1247514..1247954 Methylophaga nitratireducenticrescens 12847399 YP_006295727.1 CDS Q7A_1244 NC_017857.1 1247957 1248556 D PFAM: Phosphoglycerate mutase family; alpha-ribazole-5'-phosphate phosphatase 1247957..1248556 Methylophaga nitratireducenticrescens 12847400 YP_006295728.1 CDS Q7A_1245 NC_017857.1 1248553 1249731 D PFAM: Cupin superfamily protein; hypothetical protein 1248553..1249731 Methylophaga nitratireducenticrescens 12847401 YP_006295729.1 CDS Q7A_1246 NC_017857.1 1249735 1250247 R PFAM: Protein of unknown function (DUF1451); Zn-finger containing NTP pyrophosphohydrolase complement(1249735..1250247) Methylophaga nitratireducenticrescens 12847402 YP_006295730.1 CDS Q7A_1247 NC_017857.1 1250318 1250803 D PFAM: Disulfide bond formation protein DsbB; periplasmic thiol:disulfide oxidoreductase DsbB 1250318..1250803 Methylophaga nitratireducenticrescens 12847403 YP_006295731.1 CDS Q7A_1248 NC_017857.1 1250852 1251070 R PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 complement(1250852..1251070) Methylophaga nitratireducenticrescens 12847404 YP_006295732.1 CDS Q7A_1249 NC_017857.1 1251119 1251832 R PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus; Arginine-tRNA-protein transferase complement(1251119..1251832) Methylophaga nitratireducenticrescens 12847405 YP_006295733.1 CDS Q7A_1250 NC_017857.1 1251822 1252448 R PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase complement(1251822..1252448) Methylophaga nitratireducenticrescens 12847406 YP_006295734.1 CDS Q7A_1251 NC_017857.1 1252547 1253725 R PFAM: HDOD domain; signal transduction protein complement(1252547..1253725) Methylophaga nitratireducenticrescens 12847407 YP_006295735.1 CDS Q7A_1252 NC_017857.1 1253756 1254355 R PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; Recombination protein RecR complement(1253756..1254355) Methylophaga nitratireducenticrescens 12847408 YP_006295736.1 CDS Q7A_1253 NC_017857.1 1254363 1254671 R PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein complement(1254363..1254671) Methylophaga nitratireducenticrescens 12847409 YP_006295737.1 CDS Q7A_1254 NC_017857.1 1254690 1256480 R PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau complement(1254690..1256480) Methylophaga nitratireducenticrescens 12847410 YP_006295738.1 CDS Q7A_1256 NC_017857.1 1257021 1257860 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Pantothenate kinase type III, CoaX-like protein complement(1257021..1257860) Methylophaga nitratireducenticrescens 12847412 YP_006295739.1 CDS Q7A_1257 NC_017857.1 1257857 1258660 R PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--protein ligase complement(1257857..1258660) Methylophaga nitratireducenticrescens 12847413 YP_006295740.1 CDS Q7A_1258 NC_017857.1 1258753 1258977 R hypothetical protein complement(1258753..1258977) Methylophaga nitratireducenticrescens 12847414 YP_006295741.1 CDS Q7A_1259 NC_017857.1 1259025 1259390 R PFAM: Predicted membrane protein (DUF2069); hypothetical protein complement(1259025..1259390) Methylophaga nitratireducenticrescens 12847415 YP_006295742.1 CDS Q7A_1260 NC_017857.1 1259387 1259929 R PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; flavoprotein WrbA complement(1259387..1259929) Methylophaga nitratireducenticrescens 12847416 YP_006295743.1 CDS Q7A_1261 NC_017857.1 1259990 1260340 R PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; arsenate reductase (glutaredoxin); Arsenate reductase complement(1259990..1260340) Methylophaga nitratireducenticrescens 12847417 YP_006295744.1 CDS Q7A_1262 NC_017857.1 1260337 1261518 R Heat shock protein YciM, precursor complement(1260337..1261518) Methylophaga nitratireducenticrescens 12847418 YP_006295745.1 CDS Q7A_1263 NC_017857.1 1261527 1261823 R PFAM: Protein of unknown function (DUF1049); hypothetical protein complement(1261527..1261823) Methylophaga nitratireducenticrescens 12847419 YP_006295746.1 CDS Q7A_1264 NC_017857.1 1261976 1262299 D PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain; 4Fe-4S ferredoxin 1261976..1262299 Methylophaga nitratireducenticrescens 12847420 YP_006295747.1 CDS Q7A_1265 NC_017857.1 1262359 1263219 R PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; RNA polymerase sigma factor RpoH complement(1262359..1263219) Methylophaga nitratireducenticrescens 12847421 YP_006295748.1 CDS Q7A_1266 NC_017857.1 1263323 1264249 R PFAM: Predicted permease; cell division protein FtsX complement(1263323..1264249) Methylophaga nitratireducenticrescens 12847422 YP_006295749.1 CDS Q7A_1267 NC_017857.1 1264246 1264908 R PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; cell division transporter ATP-binding protein FtsE complement(1264246..1264908) Methylophaga nitratireducenticrescens 12847423 YP_006295750.1 CDS Q7A_1268 NC_017857.1 1264905 1265969 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; Signal recognition particle receptor protein FtsY complement(1264905..1265969) Methylophaga nitratireducenticrescens 12847424 YP_006295751.1 CDS Q7A_1269 NC_017857.1 1266033 1267394 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase 1266033..1267394 Methylophaga nitratireducenticrescens 12847425 YP_006295752.1 CDS Q7A_1270 NC_017857.1 1267384 1268685 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Zinc protease 1267384..1268685 Methylophaga nitratireducenticrescens 12847426 YP_006295753.1 CDS Q7A_1271 NC_017857.1 1268753 1269241 D PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; ribosomal RNA small subunit methyltransferase D 1268753..1269241 Methylophaga nitratireducenticrescens 12847427 YP_006295754.1 CDS Q7A_1272 NC_017857.1 1269251 1269748 D PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; phosphopantetheine adenylyltransferase 1269251..1269748 Methylophaga nitratireducenticrescens 12847428 YP_006295755.1 CDS Q7A_1273 NC_017857.1 1269797 1270051 D 4Fe-4S ferredoxin 1269797..1270051 Methylophaga nitratireducenticrescens 12847429 YP_006295756.1 CDS Q7A_1274 NC_017857.1 1270126 1270512 D PFAM: H-NS histone family; DNA-binding protein H-NS 1270126..1270512 Methylophaga nitratireducenticrescens 12847430 YP_006295757.1 CDS Q7A_1275 NC_017857.1 1270673 1273126 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 1270673..1273126 Methylophaga nitratireducenticrescens 12847431 YP_006295758.1 CDS Q7A_1276 NC_017857.1 1273145 1273630 D PFAM: Rare lipoprotein B family; LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) 1273145..1273630 Methylophaga nitratireducenticrescens 12847432 YP_006295759.1 CDS Q7A_1277 NC_017857.1 1273636 1274667 D PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1273636..1274667 Methylophaga nitratireducenticrescens 12847433 YP_006295760.1 CDS Q7A_1278 NC_017857.1 1274697 1275953 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1274697..1275953 Methylophaga nitratireducenticrescens 12847434 YP_006295761.1 CDS Q7A_1279 NC_017857.1 1275928 1276593 D PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; bacterial NadD family; nicotinate-nucleotide adenylyltransferase 1275928..1276593 Methylophaga nitratireducenticrescens 12847435 YP_006295762.1 CDS Q7A_1280 NC_017857.1 1276600 1277451 D PFAM: DUF218 domain; hypothetical protein 1276600..1277451 Methylophaga nitratireducenticrescens 12847436 YP_006295763.1 CDS Q7A_1281 NC_017857.1 1277485 1277841 D PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; Iojap-like protein 1277485..1277841 Methylophaga nitratireducenticrescens 12847437 YP_006295764.1 CDS Q7A_1282 NC_017857.1 1277838 1278308 D PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; 50S m3Psi1915 methyltransferase 1277838..1278308 Methylophaga nitratireducenticrescens 12847438 YP_006295765.1 CDS Q7A_1283 NC_017857.1 1278305 1278892 D PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf 1278305..1278892 Methylophaga nitratireducenticrescens 12847439 YP_006295766.1 CDS Q7A_1284 NC_017857.1 1278882 1280354 D PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease G 1278882..1280354 Methylophaga nitratireducenticrescens 12847440 YP_006295767.1 CDS Q7A_1285 NC_017857.1 1280357 1284166 D TIGRFAM: TIGR02099 family protein; hypothetical protein 1280357..1284166 Methylophaga nitratireducenticrescens 12847441 YP_006295768.1 CDS Q7A_1286 NC_017857.1 1284208 1285650 D PFAM: Putative modulator of DNA gyrase; TldD-like protein 1284208..1285650 Methylophaga nitratireducenticrescens 12847442 YP_006295769.1 CDS Q7A_1289 NC_017857.1 1286698 1286925 D PFAM: SirA-like protein; tRNA 5-methylaminomethyl-2-thiouridine synthase TusA 1286698..1286925 Methylophaga nitratireducenticrescens 12847444 YP_006295770.1 CDS Q7A_1290 NC_017857.1 1287099 1288508 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase 1287099..1288508 Methylophaga nitratireducenticrescens 12847445 YP_006295771.1 CDS Q7A_1291 NC_017857.1 1288623 1289240 D hypothetical protein 1288623..1289240 Methylophaga nitratireducenticrescens 12847446 YP_006295772.1 CDS Q7A_1292 NC_017857.1 1289418 1290476 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; nitrogen regulation protein NR(II) 1289418..1290476 Methylophaga nitratireducenticrescens 12847447 YP_006295773.1 CDS Q7A_1293 NC_017857.1 1290481 1291884 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I); nitrogen regulation protein NR(I) 1290481..1291884 Methylophaga nitratireducenticrescens 12847448 YP_006295774.1 CDS Q7A_1295 NC_017857.1 1292107 1292553 D PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 1292107..1292553 Methylophaga nitratireducenticrescens 12847450 YP_006295775.1 CDS Q7A_1296 NC_017857.1 1292629 1294143 D PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; transcription termination protein NusA 1292629..1294143 Methylophaga nitratireducenticrescens 12847451 YP_006295776.1 CDS Q7A_1297 NC_017857.1 1294147 1296942 D PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 1294147..1296942 Methylophaga nitratireducenticrescens 12847452 YP_006295777.1 CDS Q7A_1298 NC_017857.1 1296942 1297343 D PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 1296942..1297343 Methylophaga nitratireducenticrescens 12847453 YP_006295778.1 CDS Q7A_1299 NC_017857.1 1297353 1298282 D PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 1297353..1298282 Methylophaga nitratireducenticrescens 12847454 YP_006295779.1 CDS Q7A_1300 NC_017857.1 1298412 1298681 D PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 1298412..1298681 Methylophaga nitratireducenticrescens 12847455 YP_006295780.1 CDS Q7A_1301 NC_017857.1 1298872 1300965 D PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase 1298872..1300965 Methylophaga nitratireducenticrescens 12847456 YP_006295781.1 CDS Q7A_1302 NC_017857.1 1301026 1301793 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein 1301026..1301793 Methylophaga nitratireducenticrescens 12847457 YP_006295782.1 CDS Q7A_1303 NC_017857.1 1301797 1302459 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdenum transport system permease ModB 1301797..1302459 Methylophaga nitratireducenticrescens 12847458 YP_006295783.1 CDS Q7A_1304 NC_017857.1 1302461 1303528 D PFAM: ABC transporter; ABC transporter-like protein 1302461..1303528 Methylophaga nitratireducenticrescens 12847459 YP_006295784.1 CDS Q7A_1305 NC_017857.1 1303651 1304346 D PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB 1303651..1304346 Methylophaga nitratireducenticrescens 12847460 YP_006295785.1 CDS Q7A_1306 NC_017857.1 1304336 1304734 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1304336..1304734 Methylophaga nitratireducenticrescens 12847461 YP_006295786.1 CDS Q7A_1307 NC_017857.1 1304731 1305162 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1304731..1305162 Methylophaga nitratireducenticrescens 12847462 YP_006295787.1 CDS Q7A_1308 NC_017857.1 1305197 1305976 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB 1305197..1305976 Methylophaga nitratireducenticrescens 12847463 YP_006295788.1 CDS Q7A_1309 NC_017857.1 1306038 1306805 D PFAM: Protein of unknown function (DUF815); hypothetical protein 1306038..1306805 Methylophaga nitratireducenticrescens 12847464 YP_006295789.1 CDS Q7A_1310 NC_017857.1 1306819 1308114 R PFAM: His Kinase A (phosphoacceptor) domain; two-component sensor complement(1306819..1308114) Methylophaga nitratireducenticrescens 12847465 YP_006295790.1 CDS Q7A_1311 NC_017857.1 1308104 1308781 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component response regulator complement(1308104..1308781) Methylophaga nitratireducenticrescens 12847466 YP_006295791.1 CDS Q7A_1314 NC_017857.1 1311930 1313099 R TIGRFAM: RND family efflux transporter, MFP subunit; membrane fusion protein complement(1311930..1313099) Methylophaga nitratireducenticrescens 12847468 YP_006295792.1 CDS Q7A_1315 NC_017857.1 1313096 1314466 R PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein complement(1313096..1314466) Methylophaga nitratireducenticrescens 12847469 YP_006295793.1 CDS Q7A_1316 NC_017857.1 1314539 1315759 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; multidrug resistance transporter complement(1314539..1315759) Methylophaga nitratireducenticrescens 12847470 YP_006295794.1 CDS Q7A_1317 NC_017857.1 1316039 1316215 D hypothetical protein 1316039..1316215 Methylophaga nitratireducenticrescens 12847471 YP_006295795.1 CDS Q7A_1318 NC_017857.1 1316303 1317598 R PFAM: Mechanosensitive ion channel; Small-conductance mechanosensitive channel complement(1316303..1317598) Methylophaga nitratireducenticrescens 12847472 YP_006295796.1 CDS Q7A_1319 NC_017857.1 1317964 1319454 D PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease 1317964..1319454 Methylophaga nitratireducenticrescens 12847473 YP_006295797.1 CDS Q7A_1320 NC_017857.1 1319475 1320335 D PFAM: Universal stress protein family; Universal stress protein 1319475..1320335 Methylophaga nitratireducenticrescens 12847474 YP_006295798.1 CDS Q7A_1321 NC_017857.1 1320335 1320700 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; DnaK suppressor protein 1320335..1320700 Methylophaga nitratireducenticrescens 12847475 YP_006295799.1 CDS Q7A_1322 NC_017857.1 1320779 1322836 D PFAM: GAF domain; GGDEF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1320779..1322836 Methylophaga nitratireducenticrescens 12847476 YP_006295800.1 CDS Q7A_1323 NC_017857.1 1323470 1324309 D PFAM: Protein of unknwon function (DUF2893); Ynd-like protein 1323470..1324309 Methylophaga nitratireducenticrescens 12847477 YP_006295801.1 CDS Q7A_1324 NC_017857.1 1324312 1325226 D PFAM: Domain of unknown function (DUF1814); Ync-like protein 1324312..1325226 Methylophaga nitratireducenticrescens 12847478 YP_006295802.1 CDS Q7A_1325 NC_017857.1 1325390 1326976 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 1325390..1326976 Methylophaga nitratireducenticrescens 12847479 YP_006295803.1 CDS Q7A_1326 NC_017857.1 1327041 1327490 D PFAM: CBS domain; inosine-5'-monophosphate dehydrogenase 1327041..1327490 Methylophaga nitratireducenticrescens 12847480 YP_006295804.1 CDS Q7A_1327 NC_017857.1 1327569 1327856 R PFAM: Protein of unknown function (DUF3579); phnO-like protein complement(1327569..1327856) Methylophaga nitratireducenticrescens 12847481 YP_006295805.1 CDS Q7A_1328 NC_017857.1 1328443 1331244 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1328443..1331244 Methylophaga nitratireducenticrescens 12847482 YP_006295806.1 CDS Q7A_1329 NC_017857.1 1331255 1331722 D PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 1331255..1331722 Methylophaga nitratireducenticrescens 12847483 YP_006295807.1 CDS Q7A_1330 NC_017857.1 1331719 1332816 D PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Biosynthetic Aromatic amino acid aminotransferase beta 1331719..1332816 Methylophaga nitratireducenticrescens 12847484 YP_006295808.1 CDS Q7A_1331 NC_017857.1 1332813 1333700 D PFAM: Prephenate dehydrogenase; cyclohexadienyl dehydrogenase 1332813..1333700 Methylophaga nitratireducenticrescens 12847485 YP_006295809.1 CDS Q7A_1332 NC_017857.1 1333720 1335039 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; cyclohexadienyl dehydrogenase / 5-Enolpyruvylshikimate-3-phosphate synthase 1333720..1335039 Methylophaga nitratireducenticrescens 12847486 YP_006295810.1 CDS Q7A_1333 NC_017857.1 1335032 1335694 D PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 1335032..1335694 Methylophaga nitratireducenticrescens 12847487 YP_006295811.1 CDS Q7A_1334 NC_017857.1 1335804 1337477 D PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 1335804..1337477 Methylophaga nitratireducenticrescens 12847488 YP_006295812.1 CDS Q7A_1335 NC_017857.1 1337590 1337880 D PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; integration host factor subunit beta 1337590..1337880 Methylophaga nitratireducenticrescens 12847489 YP_006295813.1 CDS Q7A_1336 NC_017857.1 1337887 1338273 D PFAM: Protein of unknown function (DUF498/DUF598); hypothetical protein 1337887..1338273 Methylophaga nitratireducenticrescens 12847490 YP_006295814.1 CDS Q7A_1337 NC_017857.1 1339205 1340413 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase subunit CcoN 1339205..1340413 Methylophaga nitratireducenticrescens 12847491 YP_006295815.1 CDS Q7A_1338 NC_017857.1 1340424 1341101 D PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase subunit CcoO 1340424..1341101 Methylophaga nitratireducenticrescens 12847492 YP_006295816.1 CDS Q7A_1339 NC_017857.1 1341094 1341303 D PFAM: Cbb3-type cytochrome oxidase component FixQ; Cbb3-type cytochrome oxidase component FixQ 1341094..1341303 Methylophaga nitratireducenticrescens 12847493 YP_006295817.1 CDS Q7A_1340 NC_017857.1 1341296 1342228 D PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase subunit CcoP 1341296..1342228 Methylophaga nitratireducenticrescens 12847494 YP_006295818.1 CDS Q7A_1341 NC_017857.1 1342268 1342387 D hypothetical protein 1342268..1342387 Methylophaga nitratireducenticrescens 12847495 YP_006295819.1 CDS Q7A_1342 NC_017857.1 1342789 1343292 D PFAM: FixH; hypothetical protein 1342789..1343292 Methylophaga nitratireducenticrescens 12847496 YP_006295820.1 CDS Q7A_1345 NC_017857.1 1345783 1345992 D PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; type cbb3 cytochrome oxidase biogenesis protein CcoS 1345783..1345992 Methylophaga nitratireducenticrescens 12847498 YP_006295821.1 CDS Q7A_1346 NC_017857.1 1346021 1347148 D PFAM: Receptor family ligand binding region; leucine/isoleucine/valine-binding protein precursor 1346021..1347148 Methylophaga nitratireducenticrescens 12847499 YP_006295822.1 CDS Q7A_1347 NC_017857.1 1347173 1350532 D PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1347173..1350532 Methylophaga nitratireducenticrescens 12847500 YP_006295823.1 CDS Q7A_1348 NC_017857.1 1350511 1351020 R membrane-bound lytic murein transglycosylase B complement(1350511..1351020) Methylophaga nitratireducenticrescens 12847501 YP_006295824.1 CDS Q7A_1349 NC_017857.1 1351152 1351595 R PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(1351152..1351595) Methylophaga nitratireducenticrescens 12847502 YP_006295825.1 CDS Q7A_1350 NC_017857.1 1351592 1352584 R PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; proline iminopeptidase complement(1351592..1352584) Methylophaga nitratireducenticrescens 12847503 YP_006295826.1 CDS Q7A_1351 NC_017857.1 1352698 1353861 D PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta 1352698..1353861 Methylophaga nitratireducenticrescens 12847504 YP_006295827.1 CDS Q7A_1352 NC_017857.1 1353869 1354741 D PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA ligase (ADP-forming) subunit alpha 1353869..1354741 Methylophaga nitratireducenticrescens 12847505 YP_006295828.1 CDS Q7A_1353 NC_017857.1 1354741 1356384 D PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD synthetase glutamine amidotransferase subunit 1354741..1356384 Methylophaga nitratireducenticrescens 12847506 YP_006295829.1 CDS Q7A_1354 NC_017857.1 1356393 1356731 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1356393..1356731 Methylophaga nitratireducenticrescens 12847507 YP_006295830.1 CDS Q7A_1355 NC_017857.1 1356753 1357535 R TIGRFAM: outer membrane assembly lipoprotein YfiO; hypothetical protein complement(1356753..1357535) Methylophaga nitratireducenticrescens 12847508 YP_006295831.1 CDS Q7A_1356 NC_017857.1 1358006 1359169 D PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG family protein 1358006..1359169 Methylophaga nitratireducenticrescens 12847509 YP_006295832.1 CDS Q7A_1357 NC_017857.1 1359257 1359556 R lipoprotein complement(1359257..1359556) Methylophaga nitratireducenticrescens 12847510 YP_006295833.1 CDS Q7A_1358 NC_017857.1 1359782 1360576 D PFAM: Inositol monophosphatase family; inositol-1-monophosphatase 1359782..1360576 Methylophaga nitratireducenticrescens 12847511 YP_006295834.1 CDS Q7A_1359 NC_017857.1 1360641 1362473 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA 1360641..1362473 Methylophaga nitratireducenticrescens 12847512 YP_006295835.1 CDS Q7A_1360 NC_017857.1 1362585 1362803 D hypothetical protein 1362585..1362803 Methylophaga nitratireducenticrescens 12847513 YP_006295836.1 CDS Q7A_1361 NC_017857.1 1362803 1364398 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor PilS 1362803..1364398 Methylophaga nitratireducenticrescens 12847514 YP_006295837.1 CDS Q7A_1362 NC_017857.1 1364395 1365750 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; type IV fimbriae expression regulatory protein PilR 1364395..1365750 Methylophaga nitratireducenticrescens 12847515 YP_006295838.1 CDS Q7A_1363 NC_017857.1 1365765 1366673 R PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ; folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress complement(1365765..1366673) Methylophaga nitratireducenticrescens 12847516 YP_006295839.1 CDS Q7A_1364 NC_017857.1 1366744 1367187 D hypothetical protein 1366744..1367187 Methylophaga nitratireducenticrescens 12847517 YP_006295840.1 CDS Q7A_1365 NC_017857.1 1367162 1368763 R PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase complement(1367162..1368763) Methylophaga nitratireducenticrescens 12847518 YP_006295841.1 CDS Q7A_1366 NC_017857.1 1368892 1369467 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 1368892..1369467 Methylophaga nitratireducenticrescens 12847519 YP_006295842.1 CDS Q7A_1367 NC_017857.1 1369470 1370039 D PFAM: Anti sigma-E protein RseA, N-terminal domain; Anti sigma-E protein RseA 1369470..1370039 Methylophaga nitratireducenticrescens 12847520 YP_006295843.1 CDS Q7A_1368 NC_017857.1 1370043 1371023 D PFAM: MucB/RseB family; Sigma factor RpoE negative regulatory protein RseB precursor 1370043..1371023 Methylophaga nitratireducenticrescens 12847521 YP_006295844.1 CDS Q7A_1369 NC_017857.1 1371020 1371442 D PFAM: Positive regulator of sigma(E), RseC/MucC; Sigma factor RpoE regulatory protein RseC 1371020..1371442 Methylophaga nitratireducenticrescens 12847522 YP_006295845.1 CDS Q7A_1370 NC_017857.1 1371442 1372869 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Serine protease precursor MucD/AlgY 1371442..1372869 Methylophaga nitratireducenticrescens 12847523 YP_006295846.1 CDS Q7A_1371 NC_017857.1 1372839 1372964 R hypothetical protein complement(1372839..1372964) Methylophaga nitratireducenticrescens 12847524 YP_006295847.1 CDS Q7A_1372 NC_017857.1 1373047 1373751 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 1373047..1373751 Methylophaga nitratireducenticrescens 12847525 YP_006295848.1 CDS Q7A_1373 NC_017857.1 1373748 1375091 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1373748..1375091 Methylophaga nitratireducenticrescens 12847526 YP_006295849.1 CDS Q7A_1374 NC_017857.1 1375263 1377209 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein 1375263..1377209 Methylophaga nitratireducenticrescens 12847527 YP_006295850.1 CDS Q7A_1375 NC_017857.1 1377280 1378647 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps complement(1377280..1378647) Methylophaga nitratireducenticrescens 12847528 YP_006295851.1 CDS Q7A_1376 NC_017857.1 1378913 1380709 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; translation elongation factor LepA 1378913..1380709 Methylophaga nitratireducenticrescens 12847529 YP_006295852.1 CDS Q7A_1377 NC_017857.1 1380723 1381484 D PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Signal peptidase I 1380723..1381484 Methylophaga nitratireducenticrescens 12847530 YP_006295853.1 CDS Q7A_1378 NC_017857.1 1381606 1381992 D hypothetical protein 1381606..1381992 Methylophaga nitratireducenticrescens 12847531 YP_006295854.1 CDS Q7A_1379 NC_017857.1 1381989 1382648 D PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; ribonuclease III 1381989..1382648 Methylophaga nitratireducenticrescens 12847532 YP_006295855.1 CDS Q7A_1380 NC_017857.1 1382668 1383573 D PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1382668..1383573 Methylophaga nitratireducenticrescens 12847533 YP_006295856.1 CDS Q7A_1381 NC_017857.1 1383586 1384305 D PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA recombination and repair protein RecO 1383586..1384305 Methylophaga nitratireducenticrescens 12847534 YP_006295857.1 CDS Q7A_1382 NC_017857.1 1384318 1385049 D PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 1384318..1385049 Methylophaga nitratireducenticrescens 12847535 YP_006295858.1 CDS Q7A_1383 NC_017857.1 1385046 1385426 D PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase; Holo-(acyl-carrier protein) synthase 1385046..1385426 Methylophaga nitratireducenticrescens 12847536 YP_006295859.1 CDS Q7A_1384 NC_017857.1 1385428 1386315 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; cysteine synthase B 1385428..1386315 Methylophaga nitratireducenticrescens 12847537 YP_006295860.1 CDS Q7A_1385 NC_017857.1 1386357 1388372 D hypothetical protein 1386357..1388372 Methylophaga nitratireducenticrescens 12847538 YP_006295861.1 CDS Q7A_1386 NC_017857.1 1388384 1388983 D PFAM: Protein of unknown function (DUF1318); hypothetical protein 1388384..1388983 Methylophaga nitratireducenticrescens 12847539 YP_006295862.1 CDS Q7A_1387 NC_017857.1 1389065 1390393 D PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; RNA methyltransferase 1389065..1390393 Methylophaga nitratireducenticrescens 12847540 YP_006295863.1 CDS Q7A_1388 NC_017857.1 1390633 1391220 D TIGRFAM: VPLPA-CTERM protein sorting domain; PEP-CTERM protein sorting domain; hypothetical protein 1390633..1391220 Methylophaga nitratireducenticrescens 12847541 YP_006295864.1 CDS Q7A_1389 NC_017857.1 1391303 1392445 D PFAM: DNA alkylation repair enzyme; DNA alkylation repair protein 1391303..1392445 Methylophaga nitratireducenticrescens 12847542 YP_006295865.1 CDS Q7A_1390 NC_017857.1 1392527 1394884 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; phosphoenolpyruvate synthase complement(1392527..1394884) Methylophaga nitratireducenticrescens 12847543 YP_006295866.1 CDS Q7A_1391 NC_017857.1 1394890 1395780 R PFAM: Domain of unknown function (DUF299); hypothetical protein complement(1394890..1395780) Methylophaga nitratireducenticrescens 12847544 YP_006295867.1 CDS Q7A_1392 NC_017857.1 1396678 1396803 D hypothetical protein 1396678..1396803 Methylophaga nitratireducenticrescens 12847545 YP_006295868.1 CDS Q7A_1393 NC_017857.1 1396881 1397726 R PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase complement(1396881..1397726) Methylophaga nitratireducenticrescens 12847546 YP_006295869.1 CDS Q7A_1394 NC_017857.1 1398049 1398414 D hypothetical protein 1398049..1398414 Methylophaga nitratireducenticrescens 12847547 YP_006295870.1 CDS Q7A_1395 NC_017857.1 1398762 1399802 D PFAM: PQQ enzyme repeat; cell surface protein/ lipoprotein 1398762..1399802 Methylophaga nitratireducenticrescens 12847548 YP_006295871.1 CDS Q7A_1396 NC_017857.1 1400035 1400892 R PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase complement(1400035..1400892) Methylophaga nitratireducenticrescens 12847549 YP_006295872.1 CDS Q7A_1397 NC_017857.1 1401140 1402120 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose 4-epimerase 1401140..1402120 Methylophaga nitratireducenticrescens 12847550 YP_006295873.1 CDS Q7A_1398 NC_017857.1 1402136 1403536 D PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 1402136..1403536 Methylophaga nitratireducenticrescens 12847551 YP_006295874.1 CDS Q7A_1399 NC_017857.1 1403564 1404967 D PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Capsular polysaccharide synthesis enzyme CpsA, sugar transferase 1403564..1404967 Methylophaga nitratireducenticrescens 12847552 YP_006295875.1 CDS Q7A_1400 NC_017857.1 1405285 1405809 D TIGRFAM: PEP-CTERM protein sorting domain; hypothetical protein 1405285..1405809 Methylophaga nitratireducenticrescens 12847553 YP_006295876.1 CDS Q7A_1401 NC_017857.1 1406207 1406737 D hypothetical protein 1406207..1406737 Methylophaga nitratireducenticrescens 12847554 YP_006295877.1 CDS Q7A_1402 NC_017857.1 1407147 1407671 D TIGRFAM: PEP-CTERM protein sorting domain; hypothetical protein 1407147..1407671 Methylophaga nitratireducenticrescens 12847555 YP_006295878.1 CDS Q7A_1403 NC_017857.1 1408243 1408794 D PFAM: Polysaccharide biosynthesis/export protein; polysaccharide export protein 1408243..1408794 Methylophaga nitratireducenticrescens 12847556 YP_006295879.1 CDS Q7A_1404 NC_017857.1 1408833 1410017 D PFAM: Uncharacterized protein conserved in bacteria (DUF2320); long-chain fatty acid transport protein 1408833..1410017 Methylophaga nitratireducenticrescens 12847557 YP_006295880.1 CDS Q7A_1405 NC_017857.1 1410033 1411793 D PFAM: Chain length determinant protein; lipopolysaccharide biosynthesis protein 1410033..1411793 Methylophaga nitratireducenticrescens 12847558 YP_006295881.1 CDS Q7A_1406 NC_017857.1 1411828 1412664 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; tyrosine-protein kinase Wzc 1411828..1412664 Methylophaga nitratireducenticrescens 12847559 YP_006295882.1 CDS Q7A_1407 NC_017857.1 1412737 1413558 D general secretion pathway protein A 1412737..1413558 Methylophaga nitratireducenticrescens 12847560 YP_006295883.1 CDS Q7A_1408 NC_017857.1 1413646 1413771 R hypothetical protein complement(1413646..1413771) Methylophaga nitratireducenticrescens 12847561 YP_006295884.1 CDS Q7A_1409 NC_017857.1 1413915 1415807 D hypothetical protein 1413915..1415807 Methylophaga nitratireducenticrescens 12847562 YP_006295885.1 CDS Q7A_1410 NC_017857.1 1416110 1417015 D PFAM: Nucleotide-diphospho-sugar transferase; Nucleotide-diphospho-sugar transferase 1416110..1417015 Methylophaga nitratireducenticrescens 12847563 YP_006295886.1 CDS Q7A_1411 NC_017857.1 1417128 1418030 R PFAM: Glycosyl transferase family 2; glycosyl transferase, group 2 family protein complement(1417128..1418030) Methylophaga nitratireducenticrescens 12847564 YP_006295887.1 CDS Q7A_1412 NC_017857.1 1418033 1419400 R PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1418033..1419400) Methylophaga nitratireducenticrescens 12847565 YP_006295888.1 CDS Q7A_1413 NC_017857.1 1419444 1420598 D PFAM: Glycosyl transferases group 1; glycosyl transferase family protein 1419444..1420598 Methylophaga nitratireducenticrescens 12847566 YP_006295889.1 CDS Q7A_1414 NC_017857.1 1420595 1421506 D PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1420595..1421506 Methylophaga nitratireducenticrescens 12847567 YP_006295890.1 CDS Q7A_1415 NC_017857.1 1421576 1422901 D hypothetical protein 1421576..1422901 Methylophaga nitratireducenticrescens 12847568 YP_006295891.1 CDS Q7A_1416 NC_017857.1 1423017 1424093 D hypothetical protein 1423017..1424093 Methylophaga nitratireducenticrescens 12847569 YP_006295892.1 CDS Q7A_1417 NC_017857.1 1424090 1425070 D PFAM: Glycosyl transferase family 2; glycosyltransferases-like protein 1424090..1425070 Methylophaga nitratireducenticrescens 12847570 YP_006295893.1 CDS Q7A_1418 NC_017857.1 1425051 1425929 D PFAM: Sulfotransferase domain; sulfotransferase 1425051..1425929 Methylophaga nitratireducenticrescens 12847571 YP_006295894.1 CDS Q7A_1419 NC_017857.1 1425926 1426456 D PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1425926..1426456 Methylophaga nitratireducenticrescens 12847572 YP_006295895.1 CDS Q7A_1420 NC_017857.1 1426453 1427448 D PFAM: Glycosyl transferase family 2; glycosyl transferase 1426453..1427448 Methylophaga nitratireducenticrescens 12847573 YP_006295896.1 CDS Q7A_1421 NC_017857.1 1427455 1428681 R glycosyl transferase complement(1427455..1428681) Methylophaga nitratireducenticrescens 12847574 YP_006295897.1 CDS Q7A_1422 NC_017857.1 1428767 1430197 D PFAM: UbiA prenyltransferase family; integral membrane protein 1428767..1430197 Methylophaga nitratireducenticrescens 12847575 YP_006295898.1 CDS Q7A_1423 NC_017857.1 1430194 1430553 D PFAM: EamA-like transporter family; Small Multi-Drug resistant family protein 1430194..1430553 Methylophaga nitratireducenticrescens 12847576 YP_006295899.1 CDS Q7A_1424 NC_017857.1 1430639 1431511 D PFAM: Glycosyl transferase family 2; glycosyltransferase 1430639..1431511 Methylophaga nitratireducenticrescens 12847577 YP_006295900.1 CDS Q7A_1425 NC_017857.1 1431559 1432764 D PFAM: Glycosyl transferases group 1; glycosyltransferase 1431559..1432764 Methylophaga nitratireducenticrescens 12847578 YP_006295901.1 CDS Q7A_1426 NC_017857.1 1432778 1434715 D PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 1432778..1434715 Methylophaga nitratireducenticrescens 12847579 YP_006295902.1 CDS Q7A_1427 NC_017857.1 1435167 1436291 D PFAM: Polysaccharide biosynthesis/export protein; polysaccharide export protein 1435167..1436291 Methylophaga nitratireducenticrescens 12847580 YP_006295903.1 CDS Q7A_1428 NC_017857.1 1436310 1437650 D PFAM: Chain length determinant protein; tyrosine-protein kinase Wzc 1436310..1437650 Methylophaga nitratireducenticrescens 12847581 YP_006295904.1 CDS Q7A_1429 NC_017857.1 1437647 1438291 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; tyrosine-protein kinase EpsD 1437647..1438291 Methylophaga nitratireducenticrescens 12847582 YP_006295905.1 CDS Q7A_1430 NC_017857.1 1438542 1440050 D PFAM: O-Antigen ligase; membrane protein 1438542..1440050 Methylophaga nitratireducenticrescens 12847583 YP_006295906.1 CDS Q7A_1431 NC_017857.1 1440054 1441481 D PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1440054..1441481 Methylophaga nitratireducenticrescens 12847584 YP_006295907.1 CDS Q7A_1432 NC_017857.1 1441489 1442586 D PFAM: Glycosyl transferases group 1; glycosyl transferase 1441489..1442586 Methylophaga nitratireducenticrescens 12847585 YP_006295908.1 CDS Q7A_1433 NC_017857.1 1442865 1443164 D PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1442865..1443164 Methylophaga nitratireducenticrescens 12847586 YP_006295909.1 CDS Q7A_1434 NC_017857.1 1443161 1443739 D PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1443161..1443739 Methylophaga nitratireducenticrescens 12847587 YP_006295910.1 CDS Q7A_1435 NC_017857.1 1443739 1444686 D PFAM: Glycosyl transferase family 2; glycosyl transferase 1443739..1444686 Methylophaga nitratireducenticrescens 12847588 YP_006295911.1 CDS Q7A_1436 NC_017857.1 1444743 1445846 D PFAM: Glycosyl transferases group 1; glycosyl transferase 1444743..1445846 Methylophaga nitratireducenticrescens 12847589 YP_006295912.1 CDS Q7A_1437 NC_017857.1 1445850 1446686 D PFAM: Methyltransferase domain; methyltransferase 1445850..1446686 Methylophaga nitratireducenticrescens 12847590 YP_006295913.1 CDS Q7A_1438 NC_017857.1 1446725 1448290 D alpha-L-arabinofuranosidase 1446725..1448290 Methylophaga nitratireducenticrescens 12847591 YP_006295914.1 CDS Q7A_1439 NC_017857.1 1448341 1449507 D PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1; alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase 1448341..1449507 Methylophaga nitratireducenticrescens 12847592 YP_006295915.1 CDS Q7A_1440 NC_017857.1 1449607 1449732 R hypothetical protein complement(1449607..1449732) Methylophaga nitratireducenticrescens 12847593 YP_006295916.1 CDS Q7A_1441 NC_017857.1 1449967 1451070 D PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; N-acetylmannosaminyltransferase 1449967..1451070 Methylophaga nitratireducenticrescens 12847594 YP_006295917.1 CDS Q7A_1442 NC_017857.1 1451134 1452636 D PFAM: Transmembrane exosortase (Exosortase_EpsH); Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein; exosortase D, VPLPA-CTERM-specific; exosortase/archaeosortase family protein; exosortase; transmembrane protein EpsH 1451134..1452636 Methylophaga nitratireducenticrescens 12847595 YP_006295918.1 CDS Q7A_1443 NC_017857.1 1452653 1455034 D TPR repeat protein 1452653..1455034 Methylophaga nitratireducenticrescens 12847596 YP_006295919.1 CDS Q7A_1444 NC_017857.1 1455107 1455634 R PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 complement(1455107..1455634) Methylophaga nitratireducenticrescens 12847597 YP_006295920.1 CDS Q7A_1445 NC_017857.1 1455766 1456707 R PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator complement(1455766..1456707) Methylophaga nitratireducenticrescens 12847598 YP_006295921.1 CDS Q7A_1446 NC_017857.1 1456826 1458241 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; pyruvate carboxyl transferase subunit A 1456826..1458241 Methylophaga nitratireducenticrescens 12847599 YP_006295922.1 CDS Q7A_1447 NC_017857.1 1458265 1460055 D PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate carboxyl transferase subunit B 1458265..1460055 Methylophaga nitratireducenticrescens 12847600 YP_006295923.1 CDS Q7A_1448 NC_017857.1 1460167 1461258 R PFAM: Acyltransferase family; acyltransferase complement(1460167..1461258) Methylophaga nitratireducenticrescens 12847601 YP_006295924.1 CDS Q7A_1449 NC_017857.1 1461596 1461724 R hypothetical protein complement(1461596..1461724) Methylophaga nitratireducenticrescens 12847602 YP_006295925.1 CDS Q7A_1450 NC_017857.1 1462167 1463222 D PFAM: Cys/Met metabolism PLP-dependent enzyme; methionine gamma-lyase 1462167..1463222 Methylophaga nitratireducenticrescens 12847603 YP_006295926.1 CDS Q7A_1451 NC_017857.1 1463461 1463760 D hypothetical protein 1463461..1463760 Methylophaga nitratireducenticrescens 12847604 YP_006295927.1 CDS Q7A_1452 NC_017857.1 1463757 1464422 R hypothetical protein complement(1463757..1464422) Methylophaga nitratireducenticrescens 12847605 YP_006295928.1 CDS Q7A_1453 NC_017857.1 1464490 1465317 R PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate transport ATP-binding protein PstB complement(1464490..1465317) Methylophaga nitratireducenticrescens 12847606 YP_006295929.1 CDS Q7A_1454 NC_017857.1 1465332 1466231 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease complement(1465332..1466231) Methylophaga nitratireducenticrescens 12847607 YP_006295930.1 CDS Q7A_1455 NC_017857.1 1466228 1467205 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease complement(1466228..1467205) Methylophaga nitratireducenticrescens 12847608 YP_006295931.1 CDS Q7A_1456 NC_017857.1 1467337 1468395 R TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(1467337..1468395) Methylophaga nitratireducenticrescens 12847609 YP_006295932.1 CDS Q7A_1457 NC_017857.1 1468708 1470480 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein complement(1468708..1470480) Methylophaga nitratireducenticrescens 12847610 YP_006295933.1 CDS Q7A_1459 NC_017857.1 1471045 1471689 D hypothetical protein 1471045..1471689 Methylophaga nitratireducenticrescens 12847612 YP_006295934.1 CDS Q7A_1460 NC_017857.1 1471776 1472963 R PFAM: Aminotransferase class I and II; Aspartate aminotransferase complement(1471776..1472963) Methylophaga nitratireducenticrescens 12847613 YP_006295935.1 CDS Q7A_1461 NC_017857.1 1473036 1475048 D PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B 1473036..1475048 Methylophaga nitratireducenticrescens 12847614 YP_006295936.1 CDS Q7A_1463 NC_017857.1 1475304 1477229 D PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; threonyl-tRNA synthetase 1475304..1477229 Methylophaga nitratireducenticrescens 12847616 YP_006295937.1 CDS Q7A_1464 NC_017857.1 1477327 1477752 D PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 1477327..1477752 Methylophaga nitratireducenticrescens 12847617 YP_006295938.1 CDS Q7A_1465 NC_017857.1 1477785 1477982 D PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 1477785..1477982 Methylophaga nitratireducenticrescens 12847618 YP_006295939.1 CDS Q7A_1466 NC_017857.1 1477998 1478357 D PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 1477998..1478357 Methylophaga nitratireducenticrescens 12847619 YP_006295940.1 CDS Q7A_1467 NC_017857.1 1478461 1479498 D PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1478461..1479498 Methylophaga nitratireducenticrescens 12847620 YP_006295941.1 CDS Q7A_1468 NC_017857.1 1479514 1481889 D PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 1479514..1481889 Methylophaga nitratireducenticrescens 12847621 YP_006295942.1 CDS Q7A_1469 NC_017857.1 1481922 1482218 D PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; integration host factor subunit alpha 1481922..1482218 Methylophaga nitratireducenticrescens 12847622 YP_006295943.1 CDS Q7A_1470 NC_017857.1 1482202 1482564 D PFAM: MerR family regulatory protein; transcriptional regulator 1482202..1482564 Methylophaga nitratireducenticrescens 12847623 YP_006295944.1 CDS Q7A_1472 NC_017857.1 1482751 1483797 D PFAM: Aldo/keto reductase family; Oxidoreductase 1482751..1483797 Methylophaga nitratireducenticrescens 12847625 YP_006295945.1 CDS Q7A_1473 NC_017857.1 1483955 1486069 D PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1483955..1486069 Methylophaga nitratireducenticrescens 12847626 YP_006295946.1 CDS Q7A_1474 NC_017857.1 1486066 1486656 R PFAM: MarR family; regulatory protein complement(1486066..1486656) Methylophaga nitratireducenticrescens 12847627 YP_006295947.1 CDS Q7A_1475 NC_017857.1 1486947 1487468 D PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase 1486947..1487468 Methylophaga nitratireducenticrescens 12847628 YP_006295948.1 CDS Q7A_1476 NC_017857.1 1487513 1488874 D PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; diaminobutyrate-pyruvate aminotransferase 1487513..1488874 Methylophaga nitratireducenticrescens 12847629 YP_006295949.1 CDS Q7A_1477 NC_017857.1 1488955 1489359 D PFAM: Ectoine synthase; L-ectoine synthase 1488955..1489359 Methylophaga nitratireducenticrescens 12847630 YP_006295950.1 CDS Q7A_1478 NC_017857.1 1489417 1490859 D PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; Aspartokinase 1489417..1490859 Methylophaga nitratireducenticrescens 12847631 YP_006295951.1 CDS Q7A_1479 NC_017857.1 1490844 1491752 D PFAM: ChAPs (Chs5p-Arf1p-binding proteins); TPR repeat containing protein 1490844..1491752 Methylophaga nitratireducenticrescens 12847632 YP_006295952.1 CDS Q7A_1480 NC_017857.1 1491777 1492313 R hypothetical protein complement(1491777..1492313) Methylophaga nitratireducenticrescens 12847633 YP_006295953.1 CDS Q7A_1481 NC_017857.1 1492310 1492564 R hypothetical protein complement(1492310..1492564) Methylophaga nitratireducenticrescens 12847634 YP_006295954.1 CDS Q7A_1482 NC_017857.1 1492688 1492981 R PFAM: Transposase DDE domain; IS4 family transposase complement(1492688..1492981) Methylophaga nitratireducenticrescens 12847635 YP_006295955.1 CDS Q7A_1483 NC_017857.1 1492978 1493451 R transposase complement(1492978..1493451) Methylophaga nitratireducenticrescens 12847636 YP_006295956.1 CDS Q7A_1484 NC_017857.1 1493984 1494916 D PFAM: Fatty acid desaturase; delta-9 fatty acid desaturase 1493984..1494916 Methylophaga nitratireducenticrescens 12847637 YP_006295957.1 CDS Q7A_1485 NC_017857.1 1494913 1496175 D PFAM: Flavin containing amine oxidoreductase; Amine oxidase, flavin-containing 1494913..1496175 Methylophaga nitratireducenticrescens 12847638 YP_006295958.1 CDS Q7A_1486 NC_017857.1 1496165 1496953 D PFAM: Protein of unknown function (DUF1365); hypothetical protein 1496165..1496953 Methylophaga nitratireducenticrescens 12847639 YP_006295959.1 CDS Q7A_1487 NC_017857.1 1496950 1498212 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; S-adenosyl-L-methionine dependent methyltransferase 1496950..1498212 Methylophaga nitratireducenticrescens 12847640 YP_006295960.1 CDS Q7A_1488 NC_017857.1 1498205 1498747 D PFAM: Protein of unknown function (DUF2878); hypothetical protein 1498205..1498747 Methylophaga nitratireducenticrescens 12847641 YP_006295961.1 CDS Q7A_1489 NC_017857.1 1498734 1499498 D PFAM: Protein of unknown function (DUF1295); hypothetical protein 1498734..1499498 Methylophaga nitratireducenticrescens 12847642 YP_006295962.1 CDS Q7A_1490 NC_017857.1 1499495 1500529 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase-like protein 1499495..1500529 Methylophaga nitratireducenticrescens 12847643 YP_006295963.1 CDS Q7A_1491 NC_017857.1 1500534 1501835 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein 1500534..1501835 Methylophaga nitratireducenticrescens 12847644 YP_006295964.1 CDS Q7A_1492 NC_017857.1 1501848 1502546 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(1501848..1502546) Methylophaga nitratireducenticrescens 12847645 YP_006295965.1 CDS Q7A_1493 NC_017857.1 1502732 1502926 D PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 1502732..1502926 Methylophaga nitratireducenticrescens 12847646 YP_006295966.1 CDS Q7A_1494 NC_017857.1 1503202 1503681 D PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 1503202..1503681 Methylophaga nitratireducenticrescens 12847647 YP_006295967.1 CDS Q7A_1496 NC_017857.1 1504347 1505378 D PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1504347..1505378 Methylophaga nitratireducenticrescens 12847649 YP_006295968.1 CDS Q7A_1497 NC_017857.1 1505694 1506437 D PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA:Cm32/Um32 methyltransferase 1505694..1506437 Methylophaga nitratireducenticrescens 12847650 YP_006295969.1 CDS Q7A_1498 NC_017857.1 1506434 1507228 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine acetyltransferase 1506434..1507228 Methylophaga nitratireducenticrescens 12847651 YP_006295970.1 CDS Q7A_1499 NC_017857.1 1507279 1507728 D PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein; Iron-sulfur cluster regulator IscR 1507279..1507728 Methylophaga nitratireducenticrescens 12847652 YP_006295971.1 CDS Q7A_1500 NC_017857.1 1507747 1508889 D PFAM: Aminotransferase class-V; cysteine desulfurase 1507747..1508889 Methylophaga nitratireducenticrescens 12847653 YP_006295972.1 CDS Q7A_1501 NC_017857.1 1508894 1509226 D PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Iron binding protein IscA for iron-sulfur cluster assembly 1508894..1509226 Methylophaga nitratireducenticrescens 12847654 YP_006295973.1 CDS Q7A_1502 NC_017857.1 1509321 1510625 D PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1509321..1510625 Methylophaga nitratireducenticrescens 12847655 YP_006295974.1 CDS Q7A_1503 NC_017857.1 1510989 1511555 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; alkyl hydroperoxide reductase protein C 1510989..1511555 Methylophaga nitratireducenticrescens 12847656 YP_006295975.1 CDS Q7A_1504 NC_017857.1 1511695 1513272 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; alkyl hydroperoxide reductase protein F 1511695..1513272 Methylophaga nitratireducenticrescens 12847657 YP_006295976.1 CDS Q7A_1505 NC_017857.1 1513297 1513965 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator complement(1513297..1513965) Methylophaga nitratireducenticrescens 12847658 YP_006295977.1 CDS Q7A_1506 NC_017857.1 1513958 1515337 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific complement(1513958..1515337) Methylophaga nitratireducenticrescens 12847659 YP_006295978.1 CDS Q7A_1507 NC_017857.1 1515778 1516797 D PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase 1515778..1516797 Methylophaga nitratireducenticrescens 12847660 YP_006295979.1 CDS Q7A_1508 NC_017857.1 1516810 1517694 D MxaS-like protein 1516810..1517694 Methylophaga nitratireducenticrescens 12847661 YP_006295980.1 CDS Q7A_1509 NC_017857.1 1517706 1518545 D hypothetical protein 1517706..1518545 Methylophaga nitratireducenticrescens 12847662 YP_006295981.1 CDS Q7A_1510 NC_017857.1 1518542 1519558 D PFAM: von Willebrand factor type A domain; MxaC 1518542..1519558 Methylophaga nitratireducenticrescens 12847663 YP_006295982.1 CDS Q7A_1511 NC_017857.1 1519551 1520090 D MxaK-like protein 1519551..1520090 Methylophaga nitratireducenticrescens 12847664 YP_006295983.1 CDS Q7A_1512 NC_017857.1 1520087 1521025 D MxaL protein 1520087..1521025 Methylophaga nitratireducenticrescens 12847665 YP_006295984.1 CDS Q7A_1513 NC_017857.1 1521320 1521445 D hypothetical protein 1521320..1521445 Methylophaga nitratireducenticrescens 12847666 YP_006295985.1 CDS Q7A_1514 NC_017857.1 1521482 1521967 D PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 1521482..1521967 Methylophaga nitratireducenticrescens 12847667 YP_006295986.1 CDS Q7A_1515 NC_017857.1 1521977 1523026 D PFAM: Glycosyl hydrolase family 3 N terminal domain; beta N-acetyl-glucosaminidase 1521977..1523026 Methylophaga nitratireducenticrescens 12847668 YP_006295987.1 CDS Q7A_1516 NC_017857.1 1523102 1526587 D PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 1523102..1526587 Methylophaga nitratireducenticrescens 12847669 YP_006295988.1 CDS Q7A_1517 NC_017857.1 1526668 1527771 D PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 1526668..1527771 Methylophaga nitratireducenticrescens 12847670 YP_006295989.1 CDS Q7A_1518 NC_017857.1 1528029 1528985 D PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxyl transferase subunit alpha 1528029..1528985 Methylophaga nitratireducenticrescens 12847671 YP_006295990.1 CDS Q7A_1519 NC_017857.1 1529072 1530334 D PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 1529072..1530334 Methylophaga nitratireducenticrescens 12847672 YP_006295991.1 CDS Q7A_1520 NC_017857.1 1530440 1532077 D PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 1530440..1532077 Methylophaga nitratireducenticrescens 12847673 YP_006295992.1 CDS Q7A_1521 NC_017857.1 1532077 1532913 D PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase 1532077..1532913 Methylophaga nitratireducenticrescens 12847674 YP_006295993.1 CDS Q7A_1522 NC_017857.1 1532974 1534254 D PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 1532974..1534254 Methylophaga nitratireducenticrescens 12847675 YP_006295994.1 CDS Q7A_1523 NC_017857.1 1534265 1534552 D PFAM: Septum formation initiator; cell division protein FtsB 1534265..1534552 Methylophaga nitratireducenticrescens 12847676 YP_006295995.1 CDS Q7A_1524 NC_017857.1 1534542 1535252 D PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1534542..1535252 Methylophaga nitratireducenticrescens 12847677 YP_006295996.1 CDS Q7A_1525 NC_017857.1 1535249 1535731 D PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1535249..1535731 Methylophaga nitratireducenticrescens 12847678 YP_006295997.1 CDS Q7A_1526 NC_017857.1 1535728 1536804 D PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine 13 synthase 1535728..1536804 Methylophaga nitratireducenticrescens 12847679 YP_006295998.1 CDS Q7A_1527 NC_017857.1 1536833 1537606 D PFAM: Protein of unknown function (DUF1223); hypothetical protein 1536833..1537606 Methylophaga nitratireducenticrescens 12847680 YP_006295999.1 CDS Q7A_1528 NC_017857.1 1537614 1539008 D PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; Siroheme synthase / Uroporphyrinogen-III methyltransferase 1537614..1539008 Methylophaga nitratireducenticrescens 12847681 YP_006296000.1 CDS Q7A_1529 NC_017857.1 1539151 1541496 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1539151..1541496 Methylophaga nitratireducenticrescens 12847682 YP_006296001.1 CDS Q7A_1530 NC_017857.1 1541545 1542393 R PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase complement(1541545..1542393) Methylophaga nitratireducenticrescens 12847683 YP_006296002.1 CDS Q7A_1531 NC_017857.1 1542479 1543030 D PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase AmpD 1542479..1543030 Methylophaga nitratireducenticrescens 12847684 YP_006296003.1 CDS Q7A_1532 NC_017857.1 1543074 1543697 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase fklB complement(1543074..1543697) Methylophaga nitratireducenticrescens 12847685 YP_006296004.1 CDS Q7A_1533 NC_017857.1 1544305 1544793 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial; Iron-sulfur cluster regulator IscR 1544305..1544793 Methylophaga nitratireducenticrescens 12847686 YP_006296005.1 CDS Q7A_1534 NC_017857.1 1544786 1546234 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-sulfur cluster assembly protein SufB 1544786..1546234 Methylophaga nitratireducenticrescens 12847687 YP_006296006.1 CDS Q7A_1535 NC_017857.1 1546310 1547083 D PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-sulfur cluster assembly ATPase protein SufC 1546310..1547083 Methylophaga nitratireducenticrescens 12847688 YP_006296007.1 CDS Q7A_1536 NC_017857.1 1547080 1548384 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; Iron-sulfur cluster assembly protein SufD 1547080..1548384 Methylophaga nitratireducenticrescens 12847689 YP_006296008.1 CDS Q7A_1537 NC_017857.1 1548377 1549600 D PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; cysteine desulfurase 1548377..1549600 Methylophaga nitratireducenticrescens 12847690 YP_006296009.1 CDS Q7A_1538 NC_017857.1 1549600 1550046 D PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 1549600..1550046 Methylophaga nitratireducenticrescens 12847691 YP_006296010.1 CDS Q7A_1539 NC_017857.1 1550051 1550386 D PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; PaaD-like protein 1550051..1550386 Methylophaga nitratireducenticrescens 12847692 YP_006296011.1 CDS Q7A_1540 NC_017857.1 1550827 1552599 D PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; lipid A core--O-antigen ligase-like protein 1550827..1552599 Methylophaga nitratireducenticrescens 12847693 YP_006296012.1 CDS Q7A_1541 NC_017857.1 1552920 1553150 D hypothetical protein 1552920..1553150 Methylophaga nitratireducenticrescens 12847694 YP_006296013.1 CDS Q7A_1542 NC_017857.1 1553341 1554483 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1553341..1554483 Methylophaga nitratireducenticrescens 12847695 YP_006296014.1 CDS Q7A_1543 NC_017857.1 1554706 1554837 D hypothetical protein 1554706..1554837 Methylophaga nitratireducenticrescens 12847696 YP_006296015.1 CDS Q7A_1544 NC_017857.1 1554834 1555688 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1554834..1555688 Methylophaga nitratireducenticrescens 12847697 YP_006296016.1 CDS Q7A_1545 NC_017857.1 1555698 1556693 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1555698..1556693 Methylophaga nitratireducenticrescens 12847698 YP_006296017.1 CDS Q7A_1546 NC_017857.1 1556693 1558474 D hypothetical protein 1556693..1558474 Methylophaga nitratireducenticrescens 12847699 YP_006296018.1 CDS Q7A_1547 NC_017857.1 1558471 1559154 D hypothetical protein 1558471..1559154 Methylophaga nitratireducenticrescens 12847700 YP_006296019.1 CDS Q7A_1548 NC_017857.1 1559196 1560863 D PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; type IV fimbrial assembly, ATPase PilB 1559196..1560863 Methylophaga nitratireducenticrescens 12847701 YP_006296020.1 CDS Q7A_1549 NC_017857.1 1560928 1562073 D PFAM: Bacterial type II secretion system protein F domain; General secretion pathway protein F/ Type IV fimbrial assembly protein PilC 1560928..1562073 Methylophaga nitratireducenticrescens 12847702 YP_006296021.1 CDS Q7A_1550 NC_017857.1 1562077 1562514 D hypothetical protein 1562077..1562514 Methylophaga nitratireducenticrescens 12847703 YP_006296022.1 CDS Q7A_1551 NC_017857.1 1562515 1564674 D PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein; General secretion pathway protein D 1562515..1564674 Methylophaga nitratireducenticrescens 12847704 YP_006296023.1 CDS Q7A_1552 NC_017857.1 1564664 1565746 D hypothetical protein 1564664..1565746 Methylophaga nitratireducenticrescens 12847705 YP_006296024.1 CDS Q7A_1553 NC_017857.1 1565921 1567249 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 1565921..1567249 Methylophaga nitratireducenticrescens 12847706 YP_006296025.1 CDS Q7A_1554 NC_017857.1 1567266 1567898 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA binding response regulator 1567266..1567898 Methylophaga nitratireducenticrescens 12847707 YP_006296026.1 CDS Q7A_1555 NC_017857.1 1568038 1568475 D PFAM: Hsp20/alpha crystallin family; Heat shock protein Hsp20 1568038..1568475 Methylophaga nitratireducenticrescens 12847708 YP_006296027.1 CDS Q7A_1556 NC_017857.1 1568646 1569206 D PFAM: Peptidase propeptide and YPEB domain; propeptide, pepSY amd peptidase M4 1568646..1569206 Methylophaga nitratireducenticrescens 12847709 YP_006296028.1 CDS Q7A_1557 NC_017857.1 1569295 1571313 R PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1569295..1571313) Methylophaga nitratireducenticrescens 12847710 YP_006296029.1 CDS Q7A_1558 NC_017857.1 1571525 1572028 D hypothetical protein 1571525..1572028 Methylophaga nitratireducenticrescens 12847711 YP_006296030.1 CDS Q7A_1559 NC_017857.1 1572028 1572615 D TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase cytochrome b subunit 1572028..1572615 Methylophaga nitratireducenticrescens 12847712 YP_006296031.1 CDS Q7A_1560 NC_017857.1 1572616 1574556 D PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; succinate dehydrogenase flavoprotein subunit 1572616..1574556 Methylophaga nitratireducenticrescens 12847713 YP_006296032.1 CDS Q7A_1561 NC_017857.1 1574553 1575278 D TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase iron-sulfur protein 1574553..1575278 Methylophaga nitratireducenticrescens 12847714 YP_006296033.1 CDS Q7A_1562 NC_017857.1 1575365 1577287 D PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein; hypothetical protein 1575365..1577287 Methylophaga nitratireducenticrescens 12847715 YP_006296034.1 CDS Q7A_1563 NC_017857.1 1577332 1578144 R methyltransferase complement(1577332..1578144) Methylophaga nitratireducenticrescens 12847716 YP_006296035.1 CDS Q7A_1564 NC_017857.1 1578363 1580519 D PFAM: Sucrose synthase; Glycosyl transferases group 1; Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; sucrose-phosphate synthase, putative, glycosyltransferase domain; HAD-superfamily hydrolase, subfamily IIB; sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial; sucrose phosphate synthase 1578363..1580519 Methylophaga nitratireducenticrescens 12847717 YP_006296036.1 CDS Q7A_1565 NC_017857.1 1580520 1581377 D PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; HAD-superfamily hydrolase, subfamily IIB; alpha,alpha-trehalose-phosphate synthase 1580520..1581377 Methylophaga nitratireducenticrescens 12847718 YP_006296037.1 CDS Q7A_1566 NC_017857.1 1581374 1582246 D PFAM: pfkB family carbohydrate kinase; fructokinase 1581374..1582246 Methylophaga nitratireducenticrescens 12847719 YP_006296038.1 CDS Q7A_1567 NC_017857.1 1582289 1584244 D PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 1582289..1584244 Methylophaga nitratireducenticrescens 12847720 YP_006296039.1 CDS Q7A_1568 NC_017857.1 1584253 1584639 R PFAM: Protein of unknown function, DUF393; cell division inhibitor complement(1584253..1584639) Methylophaga nitratireducenticrescens 12847721 YP_006296040.1 CDS Q7A_1569 NC_017857.1 1584772 1586085 D PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: cryptochrome, DASH family; Cryptochrome 1584772..1586085 Methylophaga nitratireducenticrescens 12847722 YP_006296041.1 CDS Q7A_1572 NC_017857.1 1586705 1586830 D hypothetical protein 1586705..1586830 Methylophaga nitratireducenticrescens 12847724 YP_006296042.1 CDS Q7A_1573 NC_017857.1 1586960 1587931 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG 1586960..1587931 Methylophaga nitratireducenticrescens 12847725 YP_006296043.1 CDS Q7A_1574 NC_017857.1 1588179 1589165 D PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1588179..1589165 Methylophaga nitratireducenticrescens 12847726 YP_006296044.1 CDS Q7A_1575 NC_017857.1 1589308 1590618 R PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; ribosomal protein S12p complement(1589308..1590618) Methylophaga nitratireducenticrescens 12847727 YP_006296045.1 CDS Q7A_1576 NC_017857.1 1590835 1591614 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458; HAD-superfamily hydrolase 1590835..1591614 Methylophaga nitratireducenticrescens 12847728 YP_006296046.1 CDS Q7A_1577 NC_017857.1 1591599 1592387 R PFAM: Memo-like protein; dioxygenase complement(1591599..1592387) Methylophaga nitratireducenticrescens 12847729 YP_006296047.1 CDS Q7A_1578 NC_017857.1 1592857 1593513 R PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein complement(1592857..1593513) Methylophaga nitratireducenticrescens 12847730 YP_006296048.1 CDS Q7A_1579 NC_017857.1 1593594 1594499 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator complement(1593594..1594499) Methylophaga nitratireducenticrescens 12847731 YP_006296049.1 CDS Q7A_1580 NC_017857.1 1594625 1595206 D PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase 1594625..1595206 Methylophaga nitratireducenticrescens 12847732 YP_006296050.1 CDS Q7A_1581 NC_017857.1 1595217 1596059 D PFAM: Pirin C-terminal cupin domain; Pirin; Pirin 1595217..1596059 Methylophaga nitratireducenticrescens 12847733 YP_006296051.1 CDS Q7A_1582 NC_017857.1 1596117 1596389 R PFAM: Putative phospholipid-binding domain; transport-associated protein complement(1596117..1596389) Methylophaga nitratireducenticrescens 12847734 YP_006296052.1 CDS Q7A_1583 NC_017857.1 1596571 1596933 D cyclic nucleotide-binding domain (cNMP-BD) protein 1596571..1596933 Methylophaga nitratireducenticrescens 12847735 YP_006296053.1 CDS Q7A_1584 NC_017857.1 1597682 1598353 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; transcriptional regulator QseB 1597682..1598353 Methylophaga nitratireducenticrescens 12847736 YP_006296054.1 CDS Q7A_1585 NC_017857.1 1598340 1599707 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor 1598340..1599707 Methylophaga nitratireducenticrescens 12847737 YP_006296055.1 CDS Q7A_1586 NC_017857.1 1599744 1600865 D PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; alanine dehydrogenase 1599744..1600865 Methylophaga nitratireducenticrescens 12847738 YP_006296056.1 CDS Q7A_1587 NC_017857.1 1600823 1601536 R membrane-bound metal-dependent hydrolase complement(1600823..1601536) Methylophaga nitratireducenticrescens 12847739 YP_006296057.1 CDS Q7A_1588 NC_017857.1 1601550 1601666 R hypothetical protein complement(1601550..1601666) Methylophaga nitratireducenticrescens 12847740 YP_006296058.1 CDS Q7A_1589 NC_017857.1 1601995 1603587 D PFAM: Tetratricopeptide repeat; TIGRFAM: conserved hypothetical protein; hypothetical protein 1601995..1603587 Methylophaga nitratireducenticrescens 12847741 YP_006296059.1 CDS Q7A_1590 NC_017857.1 1603691 1604158 R PFAM: AhpC/TSA family; thiol peroxidase, Bcp-type complement(1603691..1604158) Methylophaga nitratireducenticrescens 12847742 YP_006296060.1 CDS Q7A_1591 NC_017857.1 1604276 1605157 D PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 1604276..1605157 Methylophaga nitratireducenticrescens 12847743 YP_006296061.1 CDS Q7A_1592 NC_017857.1 1605248 1606210 D PFAM: NlpB/DapX lipoprotein; outer membrane NlpB-like protein 1605248..1606210 Methylophaga nitratireducenticrescens 12847744 YP_006296062.1 CDS Q7A_1593 NC_017857.1 1606210 1606977 D PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase 1606210..1606977 Methylophaga nitratireducenticrescens 12847745 YP_006296063.1 CDS Q7A_1594 NC_017857.1 1606989 1607699 D PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; Phosphoribosylaminoimidazole-succinocarboxamide synthase 1606989..1607699 Methylophaga nitratireducenticrescens 12847746 YP_006296064.1 CDS Q7A_1595 NC_017857.1 1608087 1609796 D PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; lipid A core-O-antigen ligase 1608087..1609796 Methylophaga nitratireducenticrescens 12847747 YP_006296065.1 CDS Q7A_1596 NC_017857.1 1609958 1610374 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilin PilA 1609958..1610374 Methylophaga nitratireducenticrescens 12847748 YP_006296066.1 CDS Q7A_1597 NC_017857.1 1610574 1611071 D PFAM: Protein of unknown function (DUF785); hypothetical protein 1610574..1611071 Methylophaga nitratireducenticrescens 12847749 YP_006296067.1 CDS Q7A_1598 NC_017857.1 1611068 1611973 D PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; ribosomal protein S6 glutaminyl transferase 1611068..1611973 Methylophaga nitratireducenticrescens 12847750 YP_006296068.1 CDS Q7A_1599 NC_017857.1 1611973 1613028 D PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; deacylase 1611973..1613028 Methylophaga nitratireducenticrescens 12847751 YP_006296069.1 CDS Q7A_1600 NC_017857.1 1613138 1615087 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; biosynthetic arginine decarboxylase 1613138..1615087 Methylophaga nitratireducenticrescens 12847752 YP_006296070.1 CDS Q7A_1601 NC_017857.1 1615112 1616311 D PFAM: Saccharopine dehydrogenase; Carboxynorspermidine dehydrogenase 1615112..1616311 Methylophaga nitratireducenticrescens 12847753 YP_006296071.1 CDS Q7A_1602 NC_017857.1 1616669 1617835 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; Carboxynorspermidine decarboxylase 1616669..1617835 Methylophaga nitratireducenticrescens 12847754 YP_006296072.1 CDS Q7A_1603 NC_017857.1 1617832 1618716 D PFAM: Arginase family; TIGRFAM: agmatinase; Agmatinase 1617832..1618716 Methylophaga nitratireducenticrescens 12847755 YP_006296073.1 CDS Q7A_1604 NC_017857.1 1619098 1619505 D TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related; Isopropylmalate/homocitrate/citramalate synthase 1619098..1619505 Methylophaga nitratireducenticrescens 12847756 YP_006296074.1 CDS Q7A_1605 NC_017857.1 1619589 1620176 D PFAM: Acetyltransferase (GNAT) family; Histone acetyltransferase HPA2-related acetyltransferase 1619589..1620176 Methylophaga nitratireducenticrescens 12847757 YP_006296075.1 CDS Q7A_1606 NC_017857.1 1620312 1621184 D PFAM: Carbon-nitrogen hydrolase; hydrolase, carbon-nitrogen family 1620312..1621184 Methylophaga nitratireducenticrescens 12847758 YP_006296076.1 CDS Q7A_1607 NC_017857.1 1621334 1622416 D PFAM: ParA/MinD ATPase like; Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP 1621334..1622416 Methylophaga nitratireducenticrescens 12847759 YP_006296077.1 CDS Q7A_1608 NC_017857.1 1622508 1623023 D PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 1622508..1623023 Methylophaga nitratireducenticrescens 12847760 YP_006296078.1 CDS Q7A_1609 NC_017857.1 1623038 1624069 D PFAM: WD domain, G-beta repeat; hypothetical protein 1623038..1624069 Methylophaga nitratireducenticrescens 12847761 YP_006296079.1 CDS Q7A_1610 NC_017857.1 1624075 1624392 D hypothetical protein 1624075..1624392 Methylophaga nitratireducenticrescens 12847762 YP_006296080.1 CDS Q7A_1611 NC_017857.1 1624397 1627048 D PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type; membrane alanine aminopeptidase N 1624397..1627048 Methylophaga nitratireducenticrescens 12847763 YP_006296081.1 CDS Q7A_1612 NC_017857.1 1627048 1627470 D PFAM: HIT domain; diadenosine tetraphosphate (Ap4A) hydrolase 1627048..1627470 Methylophaga nitratireducenticrescens 12847764 YP_006296082.1 CDS Q7A_1613 NC_017857.1 1627499 1627747 D PFAM: Protein of unknown function (DUF2835); hypothetical protein 1627499..1627747 Methylophaga nitratireducenticrescens 12847765 YP_006296083.1 CDS Q7A_1614 NC_017857.1 1627752 1628117 R PFAM: RDD family; hypothetical protein complement(1627752..1628117) Methylophaga nitratireducenticrescens 12847766 YP_006296084.1 CDS Q7A_1615 NC_017857.1 1628271 1632155 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase, synthetase subunit 1628271..1632155 Methylophaga nitratireducenticrescens 12847767 YP_006296085.1 CDS Q7A_1616 NC_017857.1 1632274 1634274 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1632274..1634274 Methylophaga nitratireducenticrescens 12847768 YP_006296086.1 CDS Q7A_1617 NC_017857.1 1634252 1634392 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator containing a CheY-like receiver domain 1634252..1634392 Methylophaga nitratireducenticrescens 12847769 YP_006296087.1 CDS Q7A_1618 NC_017857.1 1634515 1634964 D PFAM: Rickettsia 17 kDa surface antigen; 17 kDa surface antigen 1634515..1634964 Methylophaga nitratireducenticrescens 12847770 YP_006296088.1 CDS Q7A_1619 NC_017857.1 1635202 1638111 R PFAM: EAL domain; HAMP domain; GGDEF domain; Nitrate and nitrite sensing; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(1635202..1638111) Methylophaga nitratireducenticrescens 12847771 YP_006296089.1 CDS Q7A_1620 NC_017857.1 1638547 1639179 D PFAM: LysE type translocator; threonine efflux protein 1638547..1639179 Methylophaga nitratireducenticrescens 12847772 YP_006296090.1 CDS Q7A_1621 NC_017857.1 1639498 1639851 D PFAM: MASE1; diguanylate cyclase 1639498..1639851 Methylophaga nitratireducenticrescens 12847773 YP_006296091.1 CDS Q7A_1622 NC_017857.1 1639953 1641044 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1639953..1641044 Methylophaga nitratireducenticrescens 12847774 YP_006296092.1 CDS Q7A_1623 NC_017857.1 1641073 1643073 R hypothetical protein complement(1641073..1643073) Methylophaga nitratireducenticrescens 12847775 YP_006296093.1 CDS Q7A_1624 NC_017857.1 1643372 1644613 R hypothetical protein complement(1643372..1644613) Methylophaga nitratireducenticrescens 12847776 YP_006296094.1 CDS Q7A_1625 NC_017857.1 1645008 1646798 D PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1645008..1646798 Methylophaga nitratireducenticrescens 12847777 YP_006296095.1 CDS Q7A_1626 NC_017857.1 1646935 1648368 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase subunit CcoN 1646935..1648368 Methylophaga nitratireducenticrescens 12847778 YP_006296096.1 CDS Q7A_1627 NC_017857.1 1648423 1648536 D hypothetical protein 1648423..1648536 Methylophaga nitratireducenticrescens 12847779 YP_006296097.1 CDS Q7A_1628 NC_017857.1 1648644 1649075 D PFAM: CBS domain; hypothetical protein 1648644..1649075 Methylophaga nitratireducenticrescens 12847780 YP_006296098.1 CDS Q7A_1629 NC_017857.1 1649294 1649449 R hypothetical protein complement(1649294..1649449) Methylophaga nitratireducenticrescens 12847781 YP_006296099.1 CDS Q7A_1630 NC_017857.1 1649568 1650017 D PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; hypothetical protein 1649568..1650017 Methylophaga nitratireducenticrescens 12847782 YP_006296100.1 CDS Q7A_1631 NC_017857.1 1650077 1650748 D PFAM: NADPH-dependent FMN reductase; BRAMP protein 1650077..1650748 Methylophaga nitratireducenticrescens 12847783 YP_006296101.1 CDS Q7A_1632 NC_017857.1 1650776 1651771 R PFAM: Ion channel; Ion channel complement(1650776..1651771) Methylophaga nitratireducenticrescens 12847784 YP_006296102.1 CDS Q7A_1633 NC_017857.1 1652254 1652406 R hypothetical protein complement(1652254..1652406) Methylophaga nitratireducenticrescens 12847785 YP_006296103.1 CDS Q7A_1634 NC_017857.1 1652426 1652974 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 1652426..1652974 Methylophaga nitratireducenticrescens 12847786 YP_006296104.1 CDS Q7A_1635 NC_017857.1 1652994 1653965 D PFAM: FecR protein; Fe2+-dicitrate sensor membrane protein 1652994..1653965 Methylophaga nitratireducenticrescens 12847787 YP_006296105.1 CDS Q7A_1636 NC_017857.1 1654088 1654270 D hypothetical protein 1654088..1654270 Methylophaga nitratireducenticrescens 12847788 YP_006296106.1 CDS Q7A_1637 NC_017857.1 1654346 1657801 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TonB-dependent receptor 1654346..1657801 Methylophaga nitratireducenticrescens 12847789 YP_006296107.1 CDS Q7A_1638 NC_017857.1 1657964 1658830 D hypothetical protein 1657964..1658830 Methylophaga nitratireducenticrescens 12847790 YP_006296108.1 CDS Q7A_1639 NC_017857.1 1658993 1659943 D hypothetical protein 1658993..1659943 Methylophaga nitratireducenticrescens 12847791 YP_006296109.1 CDS Q7A_1640 NC_017857.1 1660049 1662244 D PFAM: Hemolysin-type calcium-binding repeat (2 copies); alkaline phosphatase 1660049..1662244 Methylophaga nitratireducenticrescens 12847792 YP_006296110.1 CDS Q7A_1641 NC_017857.1 1662324 1662794 D PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG-like 3 1662324..1662794 Methylophaga nitratireducenticrescens 12847793 YP_006296111.1 CDS Q7A_1642 NC_017857.1 1662807 1664003 D PFAM: Bacterial type II secretion system protein F domain; secretion system X protein GspF 1662807..1664003 Methylophaga nitratireducenticrescens 12847794 YP_006296112.1 CDS Q7A_1643 NC_017857.1 1664000 1665715 D PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; secretion system X protein GspE 1664000..1665715 Methylophaga nitratireducenticrescens 12847795 YP_006296113.1 CDS Q7A_1644 NC_017857.1 1665696 1666571 D hypothetical protein 1665696..1666571 Methylophaga nitratireducenticrescens 12847796 YP_006296114.1 CDS Q7A_1645 NC_017857.1 1666568 1667080 D hypothetical protein 1666568..1667080 Methylophaga nitratireducenticrescens 12847797 YP_006296115.1 CDS Q7A_1646 NC_017857.1 1667085 1667645 D PFAM: Pilus assembly protein, PilO; transmembrane protein 1667085..1667645 Methylophaga nitratireducenticrescens 12847798 YP_006296116.1 CDS Q7A_1647 NC_017857.1 1667787 1668134 D hypothetical protein 1667787..1668134 Methylophaga nitratireducenticrescens 12847799 YP_006296117.1 CDS Q7A_1648 NC_017857.1 1668188 1670074 D PFAM: Bacterial type II and III secretion system protein; secretion system X protein GspD 1668188..1670074 Methylophaga nitratireducenticrescens 12847800 YP_006296118.1 CDS Q7A_1649 NC_017857.1 1670074 1670559 D PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG 1670074..1670559 Methylophaga nitratireducenticrescens 12847801 YP_006296119.1 CDS Q7A_1650 NC_017857.1 1670559 1670945 D PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG-like 2 1670559..1670945 Methylophaga nitratireducenticrescens 12847802 YP_006296120.1 CDS Q7A_1651 NC_017857.1 1670932 1671411 D secretion system X pseudopilin PulG 1670932..1671411 Methylophaga nitratireducenticrescens 12847803 YP_006296121.1 CDS Q7A_1652 NC_017857.1 1671441 1673168 D PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family; type I secretion system ATPase, PrtD 1671441..1673168 Methylophaga nitratireducenticrescens 12847804 YP_006296122.1 CDS Q7A_1653 NC_017857.1 1673191 1674525 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE 1673191..1674525 Methylophaga nitratireducenticrescens 12847805 YP_006296123.1 CDS Q7A_1654 NC_017857.1 1674533 1675864 D PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC 1674533..1675864 Methylophaga nitratireducenticrescens 12847806 YP_006296124.1 CDS Q7A_1655 NC_017857.1 1676253 1676936 D PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 1676253..1676936 Methylophaga nitratireducenticrescens 12847807 YP_006296125.1 CDS Q7A_1656 NC_017857.1 1676990 1677400 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1676990..1677400 Methylophaga nitratireducenticrescens 12847808 YP_006296126.1 CDS Q7A_1657 NC_017857.1 1677440 1678429 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein 1677440..1678429 Methylophaga nitratireducenticrescens 12847809 YP_006296127.1 CDS Q7A_1658 NC_017857.1 1679071 1679382 D PFAM: Protein of unknown function, DUF488; hypothetical protein 1679071..1679382 Methylophaga nitratireducenticrescens 12847810 YP_006296128.1 CDS Q7A_1661 NC_017857.1 1679739 1679924 R PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator complement(1679739..1679924) Methylophaga nitratireducenticrescens 12847813 YP_006296129.1 CDS Q7A_1662 NC_017857.1 1680152 1681372 R PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Aspartokinase complement(1680152..1681372) Methylophaga nitratireducenticrescens 12847814 YP_006296130.1 CDS Q7A_1663 NC_017857.1 1681376 1683979 R PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase complement(1681376..1683979) Methylophaga nitratireducenticrescens 12847815 YP_006296131.1 CDS Q7A_1664 NC_017857.1 1683969 1684418 R PFAM: RecX family; Regulatory protein RecX complement(1683969..1684418) Methylophaga nitratireducenticrescens 12847816 YP_006296132.1 CDS Q7A_1665 NC_017857.1 1684415 1685455 R PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A complement(1684415..1685455) Methylophaga nitratireducenticrescens 12847817 YP_006296133.1 CDS Q7A_1666 NC_017857.1 1685576 1686088 R PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; hypothetical protein complement(1685576..1686088) Methylophaga nitratireducenticrescens 12847818 YP_006296134.1 CDS Q7A_1667 NC_017857.1 1686105 1688654 D PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 1686105..1688654 Methylophaga nitratireducenticrescens 12847819 YP_006296135.1 CDS Q7A_1668 NC_017857.1 1688669 1688947 R PFAM: YcgL domain; protein YcgL complement(1688669..1688947) Methylophaga nitratireducenticrescens 12847820 YP_006296136.1 CDS Q7A_1669 NC_017857.1 1688973 1689362 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase complement(1688973..1689362) Methylophaga nitratireducenticrescens 12847821 YP_006296137.1 CDS Q7A_1670 NC_017857.1 1689391 1689810 R PFAM: OsmC-like protein; OsmC/Ohr-like protein complement(1689391..1689810) Methylophaga nitratireducenticrescens 12847822 YP_006296138.1 CDS Q7A_1671 NC_017857.1 1689860 1690594 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; cyclic AMP receptor protein 1689860..1690594 Methylophaga nitratireducenticrescens 12847823 YP_006296139.1 CDS Q7A_1672 NC_017857.1 1690574 1691371 R PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase complement(1690574..1691371) Methylophaga nitratireducenticrescens 12847824 YP_006296140.1 CDS Q7A_1673 NC_017857.1 1691381 1692409 R PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1691381..1692409) Methylophaga nitratireducenticrescens 12847825 YP_006296141.1 CDS Q7A_1674 NC_017857.1 1692399 1692989 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase complement(1692399..1692989) Methylophaga nitratireducenticrescens 12847826 YP_006296142.1 CDS Q7A_1675 NC_017857.1 1693005 1694498 R PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; Anthranilate synthase, aminase component complement(1693005..1694498) Methylophaga nitratireducenticrescens 12847827 YP_006296143.1 CDS Q7A_1676 NC_017857.1 1694508 1695176 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase complement(1694508..1695176) Methylophaga nitratireducenticrescens 12847828 YP_006296144.1 CDS Q7A_1677 NC_017857.1 1695180 1695872 R PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1695180..1695872) Methylophaga nitratireducenticrescens 12847829 YP_006296145.1 CDS Q7A_1678 NC_017857.1 1696052 1696954 D PFAM: Protein of unknown function (DUF3530); hypothetical protein 1696052..1696954 Methylophaga nitratireducenticrescens 12847830 YP_006296146.1 CDS Q7A_1679 NC_017857.1 1696954 1697760 D PFAM: Spermine/spermidine synthase; spermidine synthase 1696954..1697760 Methylophaga nitratireducenticrescens 12847831 YP_006296147.1 CDS Q7A_1680 NC_017857.1 1697893 1698450 D PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 1697893..1698450 Methylophaga nitratireducenticrescens 12847832 YP_006296148.1 CDS Q7A_1681 NC_017857.1 1698595 1700772 D PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; Fe-S oxidoreductase 1698595..1700772 Methylophaga nitratireducenticrescens 12847833 YP_006296149.1 CDS Q7A_1682 NC_017857.1 1700851 1701396 D PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 1700851..1701396 Methylophaga nitratireducenticrescens 12847834 YP_006296150.1 CDS Q7A_1683 NC_017857.1 1701414 1701983 D PFAM: YceI-like domain; hypothetical protein 1701414..1701983 Methylophaga nitratireducenticrescens 12847835 YP_006296151.1 CDS Q7A_1684 NC_017857.1 1701993 1702232 R hypothetical protein complement(1701993..1702232) Methylophaga nitratireducenticrescens 12847836 YP_006296152.1 CDS Q7A_1685 NC_017857.1 1702248 1702376 R hypothetical protein complement(1702248..1702376) Methylophaga nitratireducenticrescens 12847837 YP_006296153.1 CDS Q7A_1686 NC_017857.1 1702455 1703141 D PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; metal-dependent proteases-like protein, putative molecular chaperone 1702455..1703141 Methylophaga nitratireducenticrescens 12847838 YP_006296154.1 CDS Q7A_1687 NC_017857.1 1703138 1703869 D TIGRFAM: methyltransferase, putative; tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase 1703138..1703869 Methylophaga nitratireducenticrescens 12847839 YP_006296155.1 CDS Q7A_1688 NC_017857.1 1703866 1704837 D PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; tRNA (5-methoxyuridine) 34 synthase 1703866..1704837 Methylophaga nitratireducenticrescens 12847840 YP_006296156.1 CDS Q7A_1689 NC_017857.1 1704870 1705208 R hypothetical protein complement(1704870..1705208) Methylophaga nitratireducenticrescens 12847841 YP_006296157.1 CDS Q7A_1690 NC_017857.1 1705423 1705545 R hypothetical protein complement(1705423..1705545) Methylophaga nitratireducenticrescens 12847842 YP_006296158.1 CDS Q7A_1691 NC_017857.1 1705499 1705690 R hypothetical protein complement(1705499..1705690) Methylophaga nitratireducenticrescens 12847843 YP_006296159.1 CDS Q7A_1692 NC_017857.1 1705981 1706106 R hypothetical protein complement(1705981..1706106) Methylophaga nitratireducenticrescens 12847844 YP_006296160.1 CDS Q7A_1693 NC_017857.1 1706286 1706696 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase complement(1706286..1706696) Methylophaga nitratireducenticrescens 12847845 YP_006296161.1 CDS Q7A_1694 NC_017857.1 1706788 1708473 R PFAM: Citrate transporter; TrkA-C domain; Phosphate transporter family; sulfate permease complement(1706788..1708473) Methylophaga nitratireducenticrescens 12847846 YP_006296162.1 CDS Q7A_1695 NC_017857.1 1708666 1709190 R PFAM: Lipocalin-like domain; outer membrane lipoprotein complement(1708666..1709190) Methylophaga nitratireducenticrescens 12847847 YP_006296163.1 CDS Q7A_1696 NC_017857.1 1709286 1710095 R PFAM: Ion transport protein; Kef-type K+ transport system NAD-binding protein complement(1709286..1710095) Methylophaga nitratireducenticrescens 12847848 YP_006296164.1 CDS Q7A_1697 NC_017857.1 1710187 1710525 R PFAM: Arc-like DNA binding domain; Arc-like DNA binding domain-containing protein complement(1710187..1710525) Methylophaga nitratireducenticrescens 12847849 YP_006296165.1 CDS Q7A_1698 NC_017857.1 1710871 1712931 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1710871..1712931 Methylophaga nitratireducenticrescens 12847850 YP_006296166.1 CDS Q7A_1699 NC_017857.1 1713011 1713391 D PFAM: MerC mercury resistance protein; merC mercury resistance protein 1713011..1713391 Methylophaga nitratireducenticrescens 12847851 YP_006296167.1 CDS Q7A_1700 NC_017857.1 1713384 1713794 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein 1713384..1713794 Methylophaga nitratireducenticrescens 12847852 YP_006296168.1 CDS Q7A_1701 NC_017857.1 1713775 1714986 D PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; metal chaperone 1713775..1714986 Methylophaga nitratireducenticrescens 12847853 YP_006296169.1 CDS Q7A_1702 NC_017857.1 1714988 1715155 D PFAM: Protein of unknown function (DUF1826); hypothetical protein 1714988..1715155 Methylophaga nitratireducenticrescens 12847854 YP_006296170.1 CDS Q7A_1703 NC_017857.1 1715359 1715625 D PFAM: Protein of unknown function (DUF1826); hypothetical protein 1715359..1715625 Methylophaga nitratireducenticrescens 12847855 YP_006296171.1 CDS Q7A_1704 NC_017857.1 1715643 1716188 D PFAM: Protein of unknown function (DUF2796); zinc-binding protein 1715643..1716188 Methylophaga nitratireducenticrescens 12847856 YP_006296172.1 CDS Q7A_1705 NC_017857.1 1716188 1716652 D PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR 1716188..1716652 Methylophaga nitratireducenticrescens 12847857 YP_006296173.1 CDS Q7A_1706 NC_017857.1 1716740 1717441 D PFAM: ABC transporter; ABC transporter ATP-binding protein 1716740..1717441 Methylophaga nitratireducenticrescens 12847858 YP_006296174.1 CDS Q7A_1707 NC_017857.1 1717542 1717868 D hypothetical protein 1717542..1717868 Methylophaga nitratireducenticrescens 12847859 YP_006296175.1 CDS Q7A_1708 NC_017857.1 1717910 1719337 D TonB-dependent receptor 1717910..1719337 Methylophaga nitratireducenticrescens 12847860 YP_006296176.1 CDS Q7A_1709 NC_017857.1 1719324 1720208 R PFAM: Transposase DDE domain; transposase, IS982 family complement(1719324..1720208) Methylophaga nitratireducenticrescens 12847861 YP_006296177.1 CDS Q7A_1710 NC_017857.1 1720283 1720525 D PFAM: TonB dependent receptor; TonB-dependent receptor 1720283..1720525 Methylophaga nitratireducenticrescens 12847862 YP_006296178.1 CDS Q7A_1711 NC_017857.1 1720528 1721946 D PFAM: Domain of unknown function (DUF3526); hypothetical protein 1720528..1721946 Methylophaga nitratireducenticrescens 12847863 YP_006296179.1 CDS Q7A_1712 NC_017857.1 1721948 1723312 D PFAM: Domain of unknown function (DUF3526); hypothetical protein 1721948..1723312 Methylophaga nitratireducenticrescens 12847864 YP_006296180.1 CDS Q7A_1713 NC_017857.1 1723305 1724336 D PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; metal chaperone 1723305..1724336 Methylophaga nitratireducenticrescens 12847865 YP_006296181.1 CDS Q7A_1714 NC_017857.1 1724320 1725963 D PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A 1724320..1725963 Methylophaga nitratireducenticrescens 12847866 YP_006296182.1 CDS Q7A_1715 NC_017857.1 1725968 1726546 R PFAM: Protein of unknown function (DUF3299); hypothetical protein complement(1725968..1726546) Methylophaga nitratireducenticrescens 12847867 YP_006296183.1 CDS Q7A_1716 NC_017857.1 1726639 1727334 D PFAM: ABC transporter; ABC transporter ATP-binding protein 1726639..1727334 Methylophaga nitratireducenticrescens 12847868 YP_006296184.1 CDS Q7A_1717 NC_017857.1 1727324 1728562 D PFAM: Predicted permease; antimicrobial peptide ABC transporter permease 1727324..1728562 Methylophaga nitratireducenticrescens 12847869 YP_006296185.1 CDS Q7A_1718 NC_017857.1 1728564 1728983 R hypothetical protein complement(1728564..1728983) Methylophaga nitratireducenticrescens 12847870 YP_006296186.1 CDS Q7A_1719 NC_017857.1 1729066 1729377 D hypothetical protein 1729066..1729377 Methylophaga nitratireducenticrescens 12847871 YP_006296187.1 CDS Q7A_1720 NC_017857.1 1729604 1731007 D PFAM: GGDEF domain; MASE1; TIGRFAM: diguanylate cyclase (GGDEF) domain; signal transduction protein 1729604..1731007 Methylophaga nitratireducenticrescens 12847872 YP_006296188.1 CDS Q7A_1721 NC_017857.1 1731149 1731829 D hypothetical protein 1731149..1731829 Methylophaga nitratireducenticrescens 12847873 YP_006296189.1 CDS Q7A_1722 NC_017857.1 1732045 1733670 R iron-regulated membrane protein complement(1732045..1733670) Methylophaga nitratireducenticrescens 12847874 YP_006296190.1 CDS Q7A_1723 NC_017857.1 1733684 1733971 R hypothetical protein complement(1733684..1733971) Methylophaga nitratireducenticrescens 12847875 YP_006296191.1 CDS Q7A_1724 NC_017857.1 1733968 1734105 R hypothetical protein complement(1733968..1734105) Methylophaga nitratireducenticrescens 12847876 YP_006296192.1 CDS Q7A_1725 NC_017857.1 1734309 1736351 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor complement(1734309..1736351) Methylophaga nitratireducenticrescens 12847877 YP_006296193.1 CDS Q7A_1726 NC_017857.1 1736500 1736631 D hypothetical protein 1736500..1736631 Methylophaga nitratireducenticrescens 12847878 YP_006296194.1 CDS Q7A_1727 NC_017857.1 1736628 1737650 D AraC family transcriptional regulator 1736628..1737650 Methylophaga nitratireducenticrescens 12847879 YP_006296195.1 CDS Q7A_1728 NC_017857.1 1737785 1738360 R hypothetical protein complement(1737785..1738360) Methylophaga nitratireducenticrescens 12847880 YP_006296196.1 CDS Q7A_1729 NC_017857.1 1738659 1739975 R PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein complement(1738659..1739975) Methylophaga nitratireducenticrescens 12847881 YP_006296197.1 CDS Q7A_1730 NC_017857.1 1740099 1740845 D PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1740099..1740845 Methylophaga nitratireducenticrescens 12847882 YP_006296198.1 CDS Q7A_1731 NC_017857.1 1740927 1741130 R PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein complement(1740927..1741130) Methylophaga nitratireducenticrescens 12847883 YP_006296199.1 CDS Q7A_1732 NC_017857.1 1741411 1742439 R PFAM: Acyltransferase family; hypothetical protein complement(1741411..1742439) Methylophaga nitratireducenticrescens 12847884 YP_006296200.1 CDS Q7A_1733 NC_017857.1 1742533 1743510 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1742533..1743510) Methylophaga nitratireducenticrescens 12847885 YP_006296201.1 CDS Q7A_1734 NC_017857.1 1743751 1744719 D PFAM: Protein of unknown function (DUF3080); hypothetical protein 1743751..1744719 Methylophaga nitratireducenticrescens 12847886 YP_006296202.1 CDS Q7A_1735 NC_017857.1 1744723 1746336 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(1744723..1746336) Methylophaga nitratireducenticrescens 12847887 YP_006296203.1 CDS Q7A_1736 NC_017857.1 1746443 1746583 R hypothetical protein complement(1746443..1746583) Methylophaga nitratireducenticrescens 12847888 YP_006296204.1 CDS Q7A_1737 NC_017857.1 1746869 1747753 D PFAM: Transposase DDE domain; transposase, IS982 family 1746869..1747753 Methylophaga nitratireducenticrescens 12847889 YP_006296205.1 CDS Q7A_1738 NC_017857.1 1747900 1748262 R hypothetical protein complement(1747900..1748262) Methylophaga nitratireducenticrescens 12847890 YP_006296206.1 CDS Q7A_1739 NC_017857.1 1748352 1748879 R PFAM: NADPH-dependent FMN reductase; flavoprotein complement(1748352..1748879) Methylophaga nitratireducenticrescens 12847891 YP_006296207.1 CDS Q7A_1740 NC_017857.1 1748988 1749263 R PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily complement(1748988..1749263) Methylophaga nitratireducenticrescens 12847892 YP_006296208.1 CDS Q7A_1741 NC_017857.1 1749530 1751713 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 1749530..1751713 Methylophaga nitratireducenticrescens 12847893 YP_006296209.1 CDS Q7A_1742 NC_017857.1 1751778 1753460 R PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; NAD-dependent malic enzyme complement(1751778..1753460) Methylophaga nitratireducenticrescens 12847894 YP_006296210.1 CDS Q7A_1743 NC_017857.1 1753693 1754031 D PFAM: Protein of unknown function (DUF2845); hypothetical protein 1753693..1754031 Methylophaga nitratireducenticrescens 12847895 YP_006296211.1 CDS Q7A_1744 NC_017857.1 1754170 1754475 D hypothetical protein 1754170..1754475 Methylophaga nitratireducenticrescens 12847896 YP_006296212.1 CDS Q7A_1745 NC_017857.1 1754727 1755800 D PFAM: HlyD family secretion protein; HlyD family secretion protein 1754727..1755800 Methylophaga nitratireducenticrescens 12847897 YP_006296213.1 CDS Q7A_1746 NC_017857.1 1755800 1758577 D PFAM: ABC transporter; multidrug ABC transporter permease 1755800..1758577 Methylophaga nitratireducenticrescens 12847898 YP_006296214.1 CDS Q7A_1747 NC_017857.1 1758578 1759699 D multidrug ABC transporter permease 1758578..1759699 Methylophaga nitratireducenticrescens 12847899 YP_006296215.1 CDS Q7A_1748 NC_017857.1 1759759 1760424 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 2-deoxyglucose-6-phosphate hydrolase YniC complement(1759759..1760424) Methylophaga nitratireducenticrescens 12847900 YP_006296216.1 CDS Q7A_1749 NC_017857.1 1760530 1761168 R PFAM: GDSL-like Lipase/Acylhydrolase; Arylesterase precursor complement(1760530..1761168) Methylophaga nitratireducenticrescens 12847901 YP_006296217.1 CDS Q7A_1750 NC_017857.1 1761197 1761928 D PFAM: ABC transporter; lipoprotein releasing system ATP-binding protein LolD 1761197..1761928 Methylophaga nitratireducenticrescens 12847902 YP_006296218.1 CDS Q7A_1751 NC_017857.1 1761925 1764408 D PFAM: Predicted permease; ABC transporter permease 1761925..1764408 Methylophaga nitratireducenticrescens 12847903 YP_006296219.1 CDS Q7A_1752 NC_017857.1 1764517 1765218 D PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 1764517..1765218 Methylophaga nitratireducenticrescens 12847904 YP_006296220.1 CDS Q7A_1753 NC_017857.1 1765383 1765550 D hypothetical protein 1765383..1765550 Methylophaga nitratireducenticrescens 12847905 YP_006296221.1 CDS Q7A_1754 NC_017857.1 1765709 1765903 D PFAM: Protein of unknown function (DUF2789); hypothetical protein 1765709..1765903 Methylophaga nitratireducenticrescens 12847906 YP_006296222.1 CDS Q7A_1755 NC_017857.1 1765926 1767260 D PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; class II fumarate hydratase 1765926..1767260 Methylophaga nitratireducenticrescens 12847907 YP_006296223.1 CDS Q7A_1756 NC_017857.1 1767275 1767625 R PFAM: Protein of unknown function (DUF1232); hypothetical protein complement(1767275..1767625) Methylophaga nitratireducenticrescens 12847908 YP_006296224.1 CDS Q7A_1757 NC_017857.1 1767828 1769123 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; methyl-accepting chemotaxis protein 1767828..1769123 Methylophaga nitratireducenticrescens 12847909 YP_006296225.1 CDS Q7A_1758 NC_017857.1 1769343 1770281 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 1769343..1770281 Methylophaga nitratireducenticrescens 12847910 YP_006296226.1 CDS Q7A_1759 NC_017857.1 1770382 1772571 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 1770382..1772571 Methylophaga nitratireducenticrescens 12847911 YP_006296227.1 CDS Q7A_1760 NC_017857.1 1772580 1773065 R PFAM: Phosphate-starvation-inducible E; hypothetical protein complement(1772580..1773065) Methylophaga nitratireducenticrescens 12847912 YP_006296228.1 CDS Q7A_1761 NC_017857.1 1773507 1773872 D hypothetical protein 1773507..1773872 Methylophaga nitratireducenticrescens 12847913 YP_006296229.1 CDS Q7A_1762 NC_017857.1 1773960 1774109 R hypothetical protein complement(1773960..1774109) Methylophaga nitratireducenticrescens 12847914 YP_006296230.1 CDS Q7A_1763 NC_017857.1 1774421 1775329 D PFAM: Putative neutral zinc metallopeptidase; YpfJ-like protein 1774421..1775329 Methylophaga nitratireducenticrescens 12847915 YP_006296231.1 CDS Q7A_1764 NC_017857.1 1775612 1776163 D PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 1775612..1776163 Methylophaga nitratireducenticrescens 12847916 YP_006296232.1 CDS Q7A_1765 NC_017857.1 1776244 1777650 R PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alanine carboxypeptidase complement(1776244..1777650) Methylophaga nitratireducenticrescens 12847917 YP_006296233.1 CDS Q7A_1766 NC_017857.1 1777778 1778149 R transmembrane protein complement(1777778..1778149) Methylophaga nitratireducenticrescens 12847918 YP_006296234.1 CDS Q7A_1767 NC_017857.1 1778275 1778514 R hypothetical protein complement(1778275..1778514) Methylophaga nitratireducenticrescens 12847919 YP_006296235.1 CDS Q7A_1770 NC_017857.1 1779847 1780524 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; DNA-binding response regulator KdpE complement(1779847..1780524) Methylophaga nitratireducenticrescens 12847921 YP_006296236.1 CDS Q7A_1771 NC_017857.1 1780533 1782083 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel histidine kinase KdpD complement(1780533..1782083) Methylophaga nitratireducenticrescens 12847922 YP_006296237.1 CDS Q7A_1774 NC_017857.1 1783735 1785108 D PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 1783735..1785108 Methylophaga nitratireducenticrescens 12847924 YP_006296238.1 CDS Q7A_1775 NC_017857.1 1785217 1785843 D PFAM: LysE type translocator; threonine efflux protein 1785217..1785843 Methylophaga nitratireducenticrescens 12847925 YP_006296239.1 CDS Q7A_1776 NC_017857.1 1785860 1786174 R hypothetical protein complement(1785860..1786174) Methylophaga nitratireducenticrescens 12847926 YP_006296240.1 CDS Q7A_1777 NC_017857.1 1786275 1786730 D hypothetical protein 1786275..1786730 Methylophaga nitratireducenticrescens 12847927 YP_006296241.1 CDS Q7A_1778 NC_017857.1 1786738 1786932 R short chain dehydrogenase complement(1786738..1786932) Methylophaga nitratireducenticrescens 12847928 YP_006296242.1 CDS Q7A_1779 NC_017857.1 1787077 1787274 R hypothetical protein complement(1787077..1787274) Methylophaga nitratireducenticrescens 12847929 YP_006296243.1 CDS Q7A_1780 NC_017857.1 1787347 1788075 R PFAM: Dienelactone hydrolase family; dienelactone hydrolase-like enzyme complement(1787347..1788075) Methylophaga nitratireducenticrescens 12847930 YP_006296244.1 CDS Q7A_1781 NC_017857.1 1788388 1789029 D hypothetical protein 1788388..1789029 Methylophaga nitratireducenticrescens 12847931 YP_006296245.1 CDS Q7A_1782 NC_017857.1 1789082 1790257 D hypothetical protein 1789082..1790257 Methylophaga nitratireducenticrescens 12847932 YP_006296246.1 CDS Q7A_1783 NC_017857.1 1790285 1791721 D hypothetical protein 1790285..1791721 Methylophaga nitratireducenticrescens 12847933 YP_006296247.1 CDS Q7A_1784 NC_017857.1 1791708 1793714 D PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain; hypothetical protein 1791708..1793714 Methylophaga nitratireducenticrescens 12847934 YP_006296248.1 CDS Q7A_1785 NC_017857.1 1793714 1793851 D hypothetical protein 1793714..1793851 Methylophaga nitratireducenticrescens 12847935 YP_006296249.1 CDS Q7A_1786 NC_017857.1 1793854 1794645 D PFAM: MotA/TolQ/ExbB proton channel family; biopolymer transport protein 1793854..1794645 Methylophaga nitratireducenticrescens 12847936 YP_006296250.1 CDS Q7A_1787 NC_017857.1 1794652 1795722 D PFAM: von Willebrand factor type A domain; hypothetical protein 1794652..1795722 Methylophaga nitratireducenticrescens 12847937 YP_006296251.1 CDS Q7A_1788 NC_017857.1 1795719 1796669 D hypothetical protein 1795719..1796669 Methylophaga nitratireducenticrescens 12847938 YP_006296252.1 CDS Q7A_1789 NC_017857.1 1797065 1798819 D PFAM: CHASE2 domain; gliding motility protein GldF 1797065..1798819 Methylophaga nitratireducenticrescens 12847939 YP_006296253.1 CDS Q7A_1790 NC_017857.1 1798785 1800362 D PFAM: Peptidase family M48; peptidase 1798785..1800362 Methylophaga nitratireducenticrescens 12847940 YP_006296254.1 CDS Q7A_1791 NC_017857.1 1800437 1800772 R hypothetical protein complement(1800437..1800772) Methylophaga nitratireducenticrescens 12847941 YP_006296255.1 CDS Q7A_1792 NC_017857.1 1800906 1801649 R PFAM: Dienelactone hydrolase family; dienelactone hydrolase complement(1800906..1801649) Methylophaga nitratireducenticrescens 12847942 YP_006296256.1 CDS Q7A_1793 NC_017857.1 1801710 1802495 R PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; topoisomerase type I-like protein complement(1801710..1802495) Methylophaga nitratireducenticrescens 12847943 YP_006296257.1 CDS Q7A_1794 NC_017857.1 1802501 1804603 R PFAM: EAL domain; Phosphotransferase system, EIIC; TIGRFAM: PTS system, lactose/cellobiose family IIC component; PTS system cellobiose-specific transporter subunit IIC complement(1802501..1804603) Methylophaga nitratireducenticrescens 12847944 YP_006296258.1 CDS Q7A_1795 NC_017857.1 1805113 1805745 D hypothetical protein 1805113..1805745 Methylophaga nitratireducenticrescens 12847945 YP_006296259.1 CDS Q7A_1796 NC_017857.1 1805827 1805946 D hypothetical protein 1805827..1805946 Methylophaga nitratireducenticrescens 12847946 YP_006296260.1 CDS Q7A_1797 NC_017857.1 1805949 1806587 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator complement(1805949..1806587) Methylophaga nitratireducenticrescens 12847947 YP_006296261.1 CDS Q7A_1798 NC_017857.1 1806599 1807288 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase complement(1806599..1807288) Methylophaga nitratireducenticrescens 12847948 YP_006296262.1 CDS Q7A_1799 NC_017857.1 1807344 1808192 R PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthase complement(1807344..1808192) Methylophaga nitratireducenticrescens 12847949 YP_006296263.1 CDS Q7A_1800 NC_017857.1 1808435 1809337 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; regulatory protein, LysR:LysR, substrate-binding protein 1808435..1809337 Methylophaga nitratireducenticrescens 12847950 YP_006296264.1 CDS Q7A_1801 NC_017857.1 1809492 1810703 D PFAM: NnrS protein; NnrS protein involved in response to NO 1809492..1810703 Methylophaga nitratireducenticrescens 12847951 YP_006296265.1 CDS Q7A_1802 NC_017857.1 1810727 1811035 R PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); hypothetical protein complement(1810727..1811035) Methylophaga nitratireducenticrescens 12847952 YP_006296266.1 CDS Q7A_1803 NC_017857.1 1811135 1811551 D PFAM: MarR family; transcriptional regulator 1811135..1811551 Methylophaga nitratireducenticrescens 12847953 YP_006296267.1 CDS Q7A_1804 NC_017857.1 1812281 1814086 R hypothetical protein complement(1812281..1814086) Methylophaga nitratireducenticrescens 12847954 YP_006296268.1 CDS Q7A_1805 NC_017857.1 1814094 1815053 R PFAM: ATPase family associated with various cellular activities (AAA); ATPase complement(1814094..1815053) Methylophaga nitratireducenticrescens 12847955 YP_006296269.1 CDS Q7A_1806 NC_017857.1 1815063 1817087 R PFAM: Integrase core domain; TniA putative transposase complement(1815063..1817087) Methylophaga nitratireducenticrescens 12847956 YP_006296270.1 CDS Q7A_1807 NC_017857.1 1817075 1817842 R hypothetical protein complement(1817075..1817842) Methylophaga nitratireducenticrescens 12847957 YP_006296271.1 CDS Q7A_1808 NC_017857.1 1817895 1818902 R hypothetical protein complement(1817895..1818902) Methylophaga nitratireducenticrescens 12847958 YP_006296272.1 CDS Q7A_1809 NC_017857.1 1819050 1820045 D hypothetical protein 1819050..1820045 Methylophaga nitratireducenticrescens 12847959 YP_006296273.1 CDS Q7A_1810 NC_017857.1 1820552 1821829 R hypothetical protein complement(1820552..1821829) Methylophaga nitratireducenticrescens 12847960 YP_006296274.1 CDS Q7A_1811 NC_017857.1 1822222 1823586 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase; Heavy metal sensor histidine kinase complement(1822222..1823586) Methylophaga nitratireducenticrescens 12847961 YP_006296275.1 CDS Q7A_1812 NC_017857.1 1823618 1824310 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator; heavy metal response regulator complement(1823618..1824310) Methylophaga nitratireducenticrescens 12847962 YP_006296276.1 CDS Q7A_1813 NC_017857.1 1824629 1824907 D hypothetical protein 1824629..1824907 Methylophaga nitratireducenticrescens 12847963 YP_006296277.1 CDS Q7A_1814 NC_017857.1 1825566 1827344 D PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; multicopper oxidase 1825566..1827344 Methylophaga nitratireducenticrescens 12847964 YP_006296278.1 CDS Q7A_1815 NC_017857.1 1827354 1828103 D PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B 1827354..1828103 Methylophaga nitratireducenticrescens 12847965 YP_006296279.1 CDS Q7A_1816 NC_017857.1 1828210 1829469 D PFAM: Amino acid permease; amino acid permease 1828210..1829469 Methylophaga nitratireducenticrescens 12847966 YP_006296280.1 CDS Q7A_1817 NC_017857.1 1829553 1829693 D hypothetical protein 1829553..1829693 Methylophaga nitratireducenticrescens 12847967 YP_006296281.1 CDS Q7A_1818 NC_017857.1 1829664 1829792 R hypothetical protein complement(1829664..1829792) Methylophaga nitratireducenticrescens 12847968 YP_006296282.1 CDS Q7A_1819 NC_017857.1 1830111 1830353 D hypothetical protein 1830111..1830353 Methylophaga nitratireducenticrescens 12847969 YP_006296283.1 CDS Q7A_1820 NC_017857.1 1830350 1831048 R hypothetical protein complement(1830350..1831048) Methylophaga nitratireducenticrescens 12847970 YP_006296284.1 CDS Q7A_1821 NC_017857.1 1831469 1831816 D hypothetical protein 1831469..1831816 Methylophaga nitratireducenticrescens 12847971 YP_006296285.1 CDS Q7A_1822 NC_017857.1 1831970 1832872 R PFAM: EamA-like transporter family; drug/metabolite transporter permease complement(1831970..1832872) Methylophaga nitratireducenticrescens 12847972 YP_006296286.1 CDS Q7A_1823 NC_017857.1 1833772 1834431 R PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; hypothetical protein complement(1833772..1834431) Methylophaga nitratireducenticrescens 12847973 YP_006296287.1 CDS Q7A_1824 NC_017857.1 1834428 1834547 R hypothetical protein complement(1834428..1834547) Methylophaga nitratireducenticrescens 12847974 YP_006296288.1 CDS Q7A_1825 NC_017857.1 1835181 1835597 R hypothetical protein complement(1835181..1835597) Methylophaga nitratireducenticrescens 12847975 YP_006296289.1 CDS Q7A_1826 NC_017857.1 1835667 1835789 R hypothetical protein complement(1835667..1835789) Methylophaga nitratireducenticrescens 12847976 YP_006296290.1 CDS Q7A_1827 NC_017857.1 1836001 1838223 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; Lead, cadmium, zinc and mercury transporting ATPase complement(1836001..1838223) Methylophaga nitratireducenticrescens 12847977 YP_006296291.1 CDS Q7A_1828 NC_017857.1 1838935 1839048 D hypothetical protein 1838935..1839048 Methylophaga nitratireducenticrescens 12847978 YP_006296292.1 CDS Q7A_1829 NC_017857.1 1839126 1839380 D hypothetical protein 1839126..1839380 Methylophaga nitratireducenticrescens 12847979 YP_006296293.1 CDS Q7A_1830 NC_017857.1 1839346 1839468 R hypothetical protein complement(1839346..1839468) Methylophaga nitratireducenticrescens 12847980 YP_006296294.1 CDS Q7A_1831 NC_017857.1 1839481 1840833 D PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein, CzcC family 1839481..1840833 Methylophaga nitratireducenticrescens 12847981 YP_006296295.1 CDS Q7A_1832 NC_017857.1 1840833 1842728 D PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit; Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family 1840833..1842728 Methylophaga nitratireducenticrescens 12847982 YP_006296296.1 CDS Q7A_1833 NC_017857.1 1842725 1845895 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 1842725..1845895 Methylophaga nitratireducenticrescens 12847983 YP_006296297.1 CDS Q7A_1834 NC_017857.1 1845967 1846317 D PFAM: Copper binding periplasmic protein CusF; Copper binding periplasmic protein CusF 1845967..1846317 Methylophaga nitratireducenticrescens 12847984 YP_006296298.1 CDS Q7A_1835 NC_017857.1 1847259 1848203 D hypothetical protein 1847259..1848203 Methylophaga nitratireducenticrescens 12847985 YP_006296299.1 CDS Q7A_1836 NC_017857.1 1848196 1849179 D PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent protease domain-containing protein 1848196..1849179 Methylophaga nitratireducenticrescens 12847986 YP_006296300.1 CDS Q7A_1837 NC_017857.1 1849687 1849917 D hypothetical protein 1849687..1849917 Methylophaga nitratireducenticrescens 12847987 YP_006296301.1 CDS Q7A_1838 NC_017857.1 1849939 1850706 D phosphoesterase 1849939..1850706 Methylophaga nitratireducenticrescens 12847988 YP_006296302.1 CDS Q7A_1839 NC_017857.1 1851225 1852013 R PFAM: ThiF family; UBA/THIF-type NAD/FAD binding protein complement(1851225..1852013) Methylophaga nitratireducenticrescens 12847989 YP_006296303.1 CDS Q7A_1840 NC_017857.1 1852082 1852885 R hypothetical protein complement(1852082..1852885) Methylophaga nitratireducenticrescens 12847990 YP_006296304.1 CDS Q7A_1841 NC_017857.1 1852887 1854155 R hypothetical protein complement(1852887..1854155) Methylophaga nitratireducenticrescens 12847991 YP_006296305.1 CDS Q7A_1842 NC_017857.1 1854167 1855741 R hypothetical protein complement(1854167..1855741) Methylophaga nitratireducenticrescens 12847992 YP_006296306.1 CDS Q7A_1843 NC_017857.1 1856554 1856793 D hypothetical protein 1856554..1856793 Methylophaga nitratireducenticrescens 12847993 YP_006296307.1 CDS Q7A_1844 NC_017857.1 1857287 1859488 D PFAM: ABC transporter; Peptidase C39 family; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, HlyB family; RTX toxin transporter 1857287..1859488 Methylophaga nitratireducenticrescens 12847994 YP_006296308.1 CDS Q7A_1845 NC_017857.1 1859485 1860885 D PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein 1859485..1860885 Methylophaga nitratireducenticrescens 12847995 YP_006296309.1 CDS Q7A_1846 NC_017857.1 1861009 1861638 D hypothetical protein 1861009..1861638 Methylophaga nitratireducenticrescens 12847996 YP_006296310.1 CDS Q7A_1847 NC_017857.1 1861638 1871900 D PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain; alkaline phosphatase 1861638..1871900 Methylophaga nitratireducenticrescens 12847997 YP_006296311.1 CDS Q7A_1848 NC_017857.1 1872418 1872996 D hypothetical protein 1872418..1872996 Methylophaga nitratireducenticrescens 12847998 YP_006296312.1 CDS Q7A_1849 NC_017857.1 1873051 1874562 D hypothetical protein 1873051..1874562 Methylophaga nitratireducenticrescens 12847999 YP_006296313.1 CDS Q7A_1850 NC_017857.1 1874546 1875409 D PFAM: HNH endonuclease; HNH endonuclease 1874546..1875409 Methylophaga nitratireducenticrescens 12848000 YP_006296314.1 CDS Q7A_1851 NC_017857.1 1875605 1877110 D hypothetical protein 1875605..1877110 Methylophaga nitratireducenticrescens 12848001 YP_006296315.1 CDS Q7A_1852 NC_017857.1 1877174 1877623 R PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; toxin-antitoxin system antitoxin component complement(1877174..1877623) Methylophaga nitratireducenticrescens 12848002 YP_006296316.1 CDS Q7A_1853 NC_017857.1 1877681 1879726 R hypothetical protein complement(1877681..1879726) Methylophaga nitratireducenticrescens 12848003 YP_006296317.1 CDS Q7A_1854 NC_017857.1 1879723 1880799 R PFAM: Bacterial TniB protein; TniB protein complement(1879723..1880799) Methylophaga nitratireducenticrescens 12848004 YP_006296318.1 CDS Q7A_1855 NC_017857.1 1880796 1882601 R PFAM: Integrase core domain; transposase complement(1880796..1882601) Methylophaga nitratireducenticrescens 12848005 YP_006296319.1 CDS Q7A_1856 NC_017857.1 1882747 1883514 R hypothetical protein complement(1882747..1883514) Methylophaga nitratireducenticrescens 12848006 YP_006296320.1 CDS Q7A_1857 NC_017857.1 1883647 1884372 D hypothetical protein 1883647..1884372 Methylophaga nitratireducenticrescens 12848007 YP_006296321.1 CDS Q7A_1858 NC_017857.1 1884921 1886198 D hypothetical protein 1884921..1886198 Methylophaga nitratireducenticrescens 12848008 YP_006296322.1 CDS Q7A_1859 NC_017857.1 1886211 1888313 D hypothetical protein 1886211..1888313 Methylophaga nitratireducenticrescens 12848009 YP_006296323.1 CDS Q7A_1860 NC_017857.1 1888945 1889781 D hypothetical protein 1888945..1889781 Methylophaga nitratireducenticrescens 12848010 YP_006296324.1 CDS Q7A_1861 NC_017857.1 1890000 1891514 D PFAM: Integrase core domain; transposase 1890000..1891514 Methylophaga nitratireducenticrescens 12848011 YP_006296325.1 CDS Q7A_1862 NC_017857.1 1891526 1892272 D PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; mobile element protein 1891526..1892272 Methylophaga nitratireducenticrescens 12848012 YP_006296326.1 CDS Q7A_1863 NC_017857.1 1892817 1893965 R PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta complement(1892817..1893965) Methylophaga nitratireducenticrescens 12848013 YP_006296327.1 CDS Q7A_1864 NC_017857.1 1893965 1896832 R PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleotide reductase subunit alpha complement(1893965..1896832) Methylophaga nitratireducenticrescens 12848014 YP_006296328.1 CDS Q7A_1865 NC_017857.1 1897313 1897837 R hypothetical protein complement(1897313..1897837) Methylophaga nitratireducenticrescens 12848015 YP_006296329.1 CDS Q7A_1866 NC_017857.1 1898159 1899556 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; Cytochrome bd2, subunit I 1898159..1899556 Methylophaga nitratireducenticrescens 12848016 YP_006296330.1 CDS Q7A_1867 NC_017857.1 1899556 1900554 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); Cytochrome bd2, subunit II 1899556..1900554 Methylophaga nitratireducenticrescens 12848017 YP_006296331.1 CDS Q7A_1868 NC_017857.1 1900662 1902341 D PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit; transport ATP-binding protein CydD 1900662..1902341 Methylophaga nitratireducenticrescens 12848018 YP_006296332.1 CDS Q7A_1869 NC_017857.1 1902344 1904035 D PFAM: ABC transporter; transport ATP-binding protein CydC 1902344..1904035 Methylophaga nitratireducenticrescens 12848019 YP_006296333.1 CDS Q7A_1870 NC_017857.1 1904166 1905911 D PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; hemolysin activator protein 1904166..1905911 Methylophaga nitratireducenticrescens 12848020 YP_006296334.1 CDS Q7A_1871 NC_017857.1 1906139 1912126 D PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; Large exoprotein 1906139..1912126 Methylophaga nitratireducenticrescens 12848021 YP_006296335.1 CDS Q7A_1872 NC_017857.1 1912137 1912271 D hypothetical protein 1912137..1912271 Methylophaga nitratireducenticrescens 12848022 YP_006296336.1 CDS Q7A_1873 NC_017857.1 1912366 1913250 R PFAM: Transposase DDE domain; transposase, IS982 family complement(1912366..1913250) Methylophaga nitratireducenticrescens 12848023 YP_006296337.1 CDS Q7A_1874 NC_017857.1 1913560 1914447 D hypothetical protein 1913560..1914447 Methylophaga nitratireducenticrescens 12848024 YP_006296338.1 CDS Q7A_1875 NC_017857.1 1914863 1915522 D hypothetical protein 1914863..1915522 Methylophaga nitratireducenticrescens 12848025 YP_006296339.1 CDS Q7A_1876 NC_017857.1 1915552 1915848 D hypothetical protein 1915552..1915848 Methylophaga nitratireducenticrescens 12848026 YP_006296340.1 CDS Q7A_1877 NC_017857.1 1916107 1916610 D hypothetical protein 1916107..1916610 Methylophaga nitratireducenticrescens 12848027 YP_006296341.1 CDS Q7A_1878 NC_017857.1 1916723 1917097 D hypothetical protein 1916723..1917097 Methylophaga nitratireducenticrescens 12848028 YP_006296342.1 CDS Q7A_1879 NC_017857.1 1917309 1917689 D PFAM: PIN domain; PIN (PilT N terminus) domain-containing protein 1917309..1917689 Methylophaga nitratireducenticrescens 12848029 YP_006296343.1 CDS Q7A_1880 NC_017857.1 1918055 1918201 R PFAM: Protein of unknown function (DUF2938); hypothetical protein complement(1918055..1918201) Methylophaga nitratireducenticrescens 12848030 YP_006296344.1 CDS Q7A_1881 NC_017857.1 1918626 1919084 D PFAM: MerR family regulatory protein; MerR, DNA binding; transcriptional regulator 1918626..1919084 Methylophaga nitratireducenticrescens 12848031 YP_006296345.1 CDS Q7A_1882 NC_017857.1 1919248 1920228 R PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; monooxygenase, luciferase family( ) complement(1919248..1920228) Methylophaga nitratireducenticrescens 12848032 YP_006296346.1 CDS Q7A_1883 NC_017857.1 1920725 1922464 D PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 1920725..1922464 Methylophaga nitratireducenticrescens 12848033 YP_006296347.1 CDS Q7A_1885 NC_017857.1 1923384 1924055 D PFAM: Uncharacterised protein family UPF0005; TEGT family carrier/transport protein 1923384..1924055 Methylophaga nitratireducenticrescens 12848035 YP_006296348.1 CDS Q7A_1886 NC_017857.1 1924009 1924155 R hypothetical protein complement(1924009..1924155) Methylophaga nitratireducenticrescens 12848036 YP_006296349.1 CDS Q7A_1887 NC_017857.1 1924436 1925341 D PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein MoaA 1924436..1925341 Methylophaga nitratireducenticrescens 12848037 YP_006296350.1 CDS Q7A_1888 NC_017857.1 1925334 1926173 D PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D 1925334..1926173 Methylophaga nitratireducenticrescens 12848038 YP_006296351.1 CDS Q7A_1889 NC_017857.1 1926381 1926791 R PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; Nucleoside triphosphate pyrophosphohydrolase MazG complement(1926381..1926791) Methylophaga nitratireducenticrescens 12848039 YP_006296352.1 CDS Q7A_1890 NC_017857.1 1926791 1927195 R PFAM: S4 domain; ribosome-associated heat shock protein complement(1926791..1927195) Methylophaga nitratireducenticrescens 12848040 YP_006296353.1 CDS Q7A_1891 NC_017857.1 1927195 1929156 R PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-CoA synthetase complement(1927195..1929156) Methylophaga nitratireducenticrescens 12848041 YP_006296354.1 CDS Q7A_1892 NC_017857.1 1929293 1930813 R PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(1929293..1930813) Methylophaga nitratireducenticrescens 12848042 YP_006296355.1 CDS Q7A_1893 NC_017857.1 1931124 1932002 D PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 1931124..1932002 Methylophaga nitratireducenticrescens 12848043 YP_006296356.1 CDS Q7A_1894 NC_017857.1 1932396 1934159 D PFAM: Surface antigen variable number repeat; Surface antigen; outer membrane protein 1932396..1934159 Methylophaga nitratireducenticrescens 12848044 YP_006296357.1 CDS Q7A_1895 NC_017857.1 1934192 1938211 D PFAM: Family of unknown function (DUF490); hypothetical protein 1934192..1938211 Methylophaga nitratireducenticrescens 12848045 YP_006296358.1 CDS Q7A_1896 NC_017857.1 1938281 1938703 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein complement(1938281..1938703) Methylophaga nitratireducenticrescens 12848046 YP_006296359.1 CDS Q7A_1897 NC_017857.1 1938814 1939581 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase-like hydrolase 1938814..1939581 Methylophaga nitratireducenticrescens 12848047 YP_006296360.1 CDS Q7A_1898 NC_017857.1 1939565 1940764 D PFAM: Aminotransferase class I and II; Aspartate aminotransferase 1939565..1940764 Methylophaga nitratireducenticrescens 12848048 YP_006296361.1 CDS Q7A_1899 NC_017857.1 1940835 1941038 D PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 1940835..1941038 Methylophaga nitratireducenticrescens 12848049 YP_006296362.1 CDS Q7A_1900 NC_017857.1 1941099 1943147 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor complement(1941099..1943147) Methylophaga nitratireducenticrescens 12848050 YP_006296363.1 CDS Q7A_1901 NC_017857.1 1943431 1944189 R PFAM: Etoposide-induced protein 2.4 (EI24); sulfate transporter, CysZ-type complement(1943431..1944189) Methylophaga nitratireducenticrescens 12848051 YP_006296364.1 CDS Q7A_1902 NC_017857.1 1944201 1945478 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase complement(1944201..1945478) Methylophaga nitratireducenticrescens 12848052 YP_006296365.1 CDS Q7A_1903 NC_017857.1 1945481 1945870 R PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; NADPH dependent preQ0 reductase complement(1945481..1945870) Methylophaga nitratireducenticrescens 12848053 YP_006296366.1 CDS Q7A_1904 NC_017857.1 1945930 1946682 D PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; cell division protein ZipA 1945930..1946682 Methylophaga nitratireducenticrescens 12848054 YP_006296367.1 CDS Q7A_1905 NC_017857.1 1946666 1948678 D PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase 1946666..1948678 Methylophaga nitratireducenticrescens 12848055 YP_006296368.1 CDS Q7A_1906 NC_017857.1 1948679 1949725 D PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; anthranilate phosphoribosyltransferase 1948679..1949725 Methylophaga nitratireducenticrescens 12848056 YP_006296369.1 CDS Q7A_1907 NC_017857.1 1949722 1950132 D PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 1949722..1950132 Methylophaga nitratireducenticrescens 12848057 YP_006296370.1 CDS Q7A_1908 NC_017857.1 1950139 1950669 D PFAM: Protein of unknown function (DUF615); hypothetical protein 1950139..1950669 Methylophaga nitratireducenticrescens 12848058 YP_006296371.1 CDS Q7A_1909 NC_017857.1 1950663 1952015 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ complement(1950663..1952015) Methylophaga nitratireducenticrescens 12848059 YP_006296372.1 CDS Q7A_1910 NC_017857.1 1952008 1952685 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein complement(1952008..1952685) Methylophaga nitratireducenticrescens 12848060 YP_006296373.1 CDS Q7A_1911 NC_017857.1 1952688 1952978 R hypothetical protein complement(1952688..1952978) Methylophaga nitratireducenticrescens 12848061 YP_006296374.1 CDS Q7A_1912 NC_017857.1 1953046 1953207 R hypothetical protein complement(1953046..1953207) Methylophaga nitratireducenticrescens 12848062 YP_006296375.1 CDS Q7A_1913 NC_017857.1 1953710 1957597 R PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA; hypothetical protein complement(1953710..1957597) Methylophaga nitratireducenticrescens 12848063 YP_006296376.1 CDS Q7A_1914 NC_017857.1 1957733 1958698 R PFAM: Protein of unknown function, DUF481; salt-induced outer membrane protein complement(1957733..1958698) Methylophaga nitratireducenticrescens 12848064 YP_006296377.1 CDS Q7A_1915 NC_017857.1 1958888 1959352 R PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat-containing protein complement(1958888..1959352) Methylophaga nitratireducenticrescens 12848065 YP_006296378.1 CDS Q7A_1916 NC_017857.1 1959384 1959977 R PFAM: Nitroreductase family; nitroreductase complement(1959384..1959977) Methylophaga nitratireducenticrescens 12848066 YP_006296379.1 CDS Q7A_1917 NC_017857.1 1959996 1960289 R PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; RNA binding protein complement(1959996..1960289) Methylophaga nitratireducenticrescens 12848067 YP_006296380.1 CDS Q7A_1918 NC_017857.1 1960339 1962573 D PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; 2-phospho-D-glycerate hydrolyase 1960339..1962573 Methylophaga nitratireducenticrescens 12848068 YP_006296381.1 CDS Q7A_1919 NC_017857.1 1962565 1963317 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning protein ParA complement(1962565..1963317) Methylophaga nitratireducenticrescens 12848069 YP_006296382.1 CDS Q7A_1920 NC_017857.1 1963320 1965401 R PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase complement(1963320..1965401) Methylophaga nitratireducenticrescens 12848070 YP_006296383.1 CDS Q7A_1921 NC_017857.1 1965539 1966018 R hypothetical protein complement(1965539..1966018) Methylophaga nitratireducenticrescens 12848071 YP_006296384.1 CDS Q7A_1922 NC_017857.1 1966017 1966490 D PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 1966017..1966490 Methylophaga nitratireducenticrescens 12848072 YP_006296385.1 CDS Q7A_1923 NC_017857.1 1966480 1966905 D hypothetical protein 1966480..1966905 Methylophaga nitratireducenticrescens 12848073 YP_006296386.1 CDS Q7A_1924 NC_017857.1 1967223 1968596 D PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase 1967223..1968596 Methylophaga nitratireducenticrescens 12848074 YP_006296387.1 CDS Q7A_1925 NC_017857.1 1968617 1968901 D hypothetical protein 1968617..1968901 Methylophaga nitratireducenticrescens 12848075 YP_006296388.1 CDS Q7A_1926 NC_017857.1 1968918 1969640 D hypothetical protein 1968918..1969640 Methylophaga nitratireducenticrescens 12848076 YP_006296389.1 CDS Q7A_1927 NC_017857.1 1969682 1970281 D methyltransferase 1969682..1970281 Methylophaga nitratireducenticrescens 12848077 YP_006296390.1 CDS Q7A_1928 NC_017857.1 1970271 1970849 R PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein complement(1970271..1970849) Methylophaga nitratireducenticrescens 12848078 YP_006296391.1 CDS Q7A_1929 NC_017857.1 1970961 1973819 D PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; RNA polymerase 1970961..1973819 Methylophaga nitratireducenticrescens 12848079 YP_006296392.1 CDS Q7A_1930 NC_017857.1 1973860 1975092 D TIGRFAM: RND family efflux transporter, MFP subunit; Secretion protein HlyD 1973860..1975092 Methylophaga nitratireducenticrescens 12848080 YP_006296393.1 CDS Q7A_1931 NC_017857.1 1975085 1978222 D PFAM: AcrB/AcrD/AcrF family; RND multidrug efflux transporter 1975085..1978222 Methylophaga nitratireducenticrescens 12848081 YP_006296394.1 CDS Q7A_1932 NC_017857.1 1978233 1979453 D PFAM: Outer membrane efflux protein; outer membrane efflux protein 1978233..1979453 Methylophaga nitratireducenticrescens 12848082 YP_006296395.1 CDS Q7A_1933 NC_017857.1 1979469 1980137 R PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein complement(1979469..1980137) Methylophaga nitratireducenticrescens 12848083 YP_006296396.1 CDS Q7A_1934 NC_017857.1 1980141 1982174 R PFAM: EAL domain; HAMP domain; GGDEF domain; hypothetical protein complement(1980141..1982174) Methylophaga nitratireducenticrescens 12848084 YP_006296397.1 CDS Q7A_1935 NC_017857.1 1982259 1983173 D PFAM: Membrane transport protein; permease 1982259..1983173 Methylophaga nitratireducenticrescens 12848085 YP_006296398.1 CDS Q7A_1936 NC_017857.1 1983158 1983904 R PFAM: Probable molybdopterin binding domain; molybdopterin binding domain-containing protein complement(1983158..1983904) Methylophaga nitratireducenticrescens 12848086 YP_006296399.1 CDS Q7A_1937 NC_017857.1 1983907 1984302 R PFAM: Bacterial-like globin; hypothetical protein complement(1983907..1984302) Methylophaga nitratireducenticrescens 12848087 YP_006296400.1 CDS Q7A_1938 NC_017857.1 1984435 1984986 D PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 1984435..1984986 Methylophaga nitratireducenticrescens 12848088 YP_006296401.1 CDS Q7A_1939 NC_017857.1 1985130 1985249 D hypothetical protein 1985130..1985249 Methylophaga nitratireducenticrescens 12848089 YP_006296402.1 CDS Q7A_1940 NC_017857.1 1985405 1985905 D hypothetical protein 1985405..1985905 Methylophaga nitratireducenticrescens 12848090 YP_006296403.1 CDS Q7A_1941 NC_017857.1 1985945 1987867 D PFAM: DEAD_2; dinG family ATP-dependent helicase YoaA 1985945..1987867 Methylophaga nitratireducenticrescens 12848091 YP_006296404.1 CDS Q7A_1942 NC_017857.1 1987900 1988283 R PFAM: Uncharacterized protein conserved in bacteria (DUF2237); hypothetical protein complement(1987900..1988283) Methylophaga nitratireducenticrescens 12848092 YP_006296405.1 CDS Q7A_1943 NC_017857.1 1988286 1988672 R PFAM: Pterin 4 alpha carbinolamine dehydratase; Pterin-4-alpha-carbinolamine dehydratase complement(1988286..1988672) Methylophaga nitratireducenticrescens 12848093 YP_006296406.1 CDS Q7A_1944 NC_017857.1 1988725 1989009 R hypothetical protein complement(1988725..1989009) Methylophaga nitratireducenticrescens 12848094 YP_006296407.1 CDS Q7A_1945 NC_017857.1 1989431 1990471 R PFAM: Phage integrase family; phage integrase family protein complement(1989431..1990471) Methylophaga nitratireducenticrescens 12848095 YP_006296408.1 CDS Q7A_1946 NC_017857.1 1990481 1992025 R hypothetical protein complement(1990481..1992025) Methylophaga nitratireducenticrescens 12848096 YP_006296409.1 CDS Q7A_1947 NC_017857.1 1992035 1992994 R hypothetical protein complement(1992035..1992994) Methylophaga nitratireducenticrescens 12848097 YP_006296410.1 CDS Q7A_1948 NC_017857.1 1993003 1994853 R PFAM: Integrase core domain; integrase family protein complement(1993003..1994853) Methylophaga nitratireducenticrescens 12848098 YP_006296411.1 CDS Q7A_1949 NC_017857.1 1994893 1995603 R hypothetical protein complement(1994893..1995603) Methylophaga nitratireducenticrescens 12848099 YP_006296412.1 CDS Q7A_1950 NC_017857.1 1996023 1996304 D hypothetical protein 1996023..1996304 Methylophaga nitratireducenticrescens 12848100 YP_006296413.1 CDS Q7A_1951 NC_017857.1 1996606 1997391 R PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; inaA protein complement(1996606..1997391) Methylophaga nitratireducenticrescens 12848101 YP_006296414.1 CDS Q7A_1952 NC_017857.1 1997385 1998074 R PFAM: Methyltransferase domain; SAM-dependent methyltransferase complement(1997385..1998074) Methylophaga nitratireducenticrescens 12848102 YP_006296415.1 CDS Q7A_1953 NC_017857.1 1998392 2000353 R PFAM: Sulfatase; phosphoglycerol transferase I complement(1998392..2000353) Methylophaga nitratireducenticrescens 12848103 YP_006296416.1 CDS Q7A_1954 NC_017857.1 2000679 2000864 D PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 2000679..2000864 Methylophaga nitratireducenticrescens 12848104 YP_006296417.1 CDS Q7A_1955 NC_017857.1 2000858 2001550 D PFAM: PAP2 superfamily; PAP2 (acid phosphatase) superfamily protein 2000858..2001550 Methylophaga nitratireducenticrescens 12848105 YP_006296418.1 CDS Q7A_1956 NC_017857.1 2001579 2002247 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two component transcriptional regulator 2001579..2002247 Methylophaga nitratireducenticrescens 12848106 YP_006296419.1 CDS Q7A_1957 NC_017857.1 2002237 2003616 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2002237..2003616 Methylophaga nitratireducenticrescens 12848107 YP_006296420.1 CDS Q7A_1958 NC_017857.1 2003684 2005321 D PFAM: Sulfatase; Domain of unknown function (DUF1705); phosphoethanolamine transferase EptA 2003684..2005321 Methylophaga nitratireducenticrescens 12848108 YP_006296421.1 CDS Q7A_1959 NC_017857.1 2005814 2006116 R hypothetical protein complement(2005814..2006116) Methylophaga nitratireducenticrescens 12848109 YP_006296422.1 CDS Q7A_1960 NC_017857.1 2006311 2006424 R hypothetical protein complement(2006311..2006424) Methylophaga nitratireducenticrescens 12848110 YP_006296423.1 CDS Q7A_1961 NC_017857.1 2006593 2011239 D PFAM: Putative serine esterase (DUF676); serine esterase 2006593..2011239 Methylophaga nitratireducenticrescens 12848111 YP_006296424.1 CDS Q7A_1962 NC_017857.1 2011236 2013134 D hypothetical protein 2011236..2013134 Methylophaga nitratireducenticrescens 12848112 YP_006296425.1 CDS Q7A_1963 NC_017857.1 2013225 2013437 D PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; hypothetical protein 2013225..2013437 Methylophaga nitratireducenticrescens 12848113 YP_006296426.1 CDS Q7A_1964 NC_017857.1 2013781 2013894 R hypothetical protein complement(2013781..2013894) Methylophaga nitratireducenticrescens 12848114 YP_006296427.1 CDS Q7A_1965 NC_017857.1 2013967 2017416 R PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R complement(2013967..2017416) Methylophaga nitratireducenticrescens 12848115 YP_006296428.1 CDS Q7A_1966 NC_017857.1 2017446 2018168 R PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S complement(2017446..2018168) Methylophaga nitratireducenticrescens 12848116 YP_006296429.1 CDS Q7A_1967 NC_017857.1 2018273 2018635 R PFAM: Type I restriction modification DNA specificity domain; Restriction endonuclease S subunit complement(2018273..2018635) Methylophaga nitratireducenticrescens 12848117 YP_006296430.1 CDS Q7A_1968 NC_017857.1 2018635 2020116 R PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M complement(2018635..2020116) Methylophaga nitratireducenticrescens 12848118 YP_006296431.1 CDS Q7A_1969 NC_017857.1 2020539 2022668 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; anaerobic dehydrogenase 2020539..2022668 Methylophaga nitratireducenticrescens 12848119 YP_006296432.1 CDS Q7A_1970 NC_017857.1 2022700 2023005 D PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 2022700..2023005 Methylophaga nitratireducenticrescens 12848120 YP_006296433.1 CDS Q7A_1971 NC_017857.1 2023023 2024399 D Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type 2023023..2024399 Methylophaga nitratireducenticrescens 12848121 YP_006296434.1 CDS Q7A_1972 NC_017857.1 2024486 2024662 R hypothetical protein complement(2024486..2024662) Methylophaga nitratireducenticrescens 12848122 YP_006296435.1 CDS Q7A_1973 NC_017857.1 2024820 2026598 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 2024820..2026598 Methylophaga nitratireducenticrescens 12848123 YP_006296436.1 CDS Q7A_1974 NC_017857.1 2027059 2028249 D PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) 2027059..2028249 Methylophaga nitratireducenticrescens 12848124 YP_006296437.1 CDS Q7A_1975 NC_017857.1 2028363 2028671 D hypothetical protein 2028363..2028671 Methylophaga nitratireducenticrescens 12848125 YP_006296438.1 CDS Q7A_1976 NC_017857.1 2028674 2029363 R hypothetical protein complement(2028674..2029363) Methylophaga nitratireducenticrescens 12848126 YP_006296439.1 CDS Q7A_1977 NC_017857.1 2029356 2030138 R iron permease complement(2029356..2030138) Methylophaga nitratireducenticrescens 12848127 YP_006296440.1 CDS Q7A_1978 NC_017857.1 2030141 2030479 R hypothetical protein complement(2030141..2030479) Methylophaga nitratireducenticrescens 12848128 YP_006296441.1 CDS Q7A_1979 NC_017857.1 2030476 2031801 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor histidine kinase complement(2030476..2031801) Methylophaga nitratireducenticrescens 12848129 YP_006296442.1 CDS Q7A_1980 NC_017857.1 2031798 2032457 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system response regulator QseB complement(2031798..2032457) Methylophaga nitratireducenticrescens 12848130 YP_006296443.1 CDS Q7A_1981 NC_017857.1 2032438 2033106 R hypothetical protein complement(2032438..2033106) Methylophaga nitratireducenticrescens 12848131 YP_006296444.1 CDS Q7A_1982 NC_017857.1 2033103 2033915 R PFAM: short chain dehydrogenase; Oxidoreductase complement(2033103..2033915) Methylophaga nitratireducenticrescens 12848132 YP_006296445.1 CDS Q7A_1983 NC_017857.1 2033912 2034559 R PFAM: TENA/THI-4/PQQC family; long-chain acyl-CoA synthetase complement(2033912..2034559) Methylophaga nitratireducenticrescens 12848133 YP_006296446.1 CDS Q7A_1984 NC_017857.1 2034546 2036024 R PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase complement(2034546..2036024) Methylophaga nitratireducenticrescens 12848134 YP_006296447.1 CDS Q7A_1985 NC_017857.1 2036021 2036716 R PFAM: Thermostable hemolysin; thermostable hemolysin complement(2036021..2036716) Methylophaga nitratireducenticrescens 12848135 YP_006296448.1 CDS Q7A_1986 NC_017857.1 2036909 2037121 R proline dehydrogenase complement(2036909..2037121) Methylophaga nitratireducenticrescens 12848136 YP_006296449.1 CDS Q7A_1987 NC_017857.1 2037338 2039086 D PFAM: Sulfate transporter family; Citrate transporter; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease 2037338..2039086 Methylophaga nitratireducenticrescens 12848137 YP_006296450.1 CDS Q7A_1988 NC_017857.1 2039243 2041243 R PFAM: Sulfatase; phosphoglycerol transferase I complement(2039243..2041243) Methylophaga nitratireducenticrescens 12848138 YP_006296451.1 CDS Q7A_1989 NC_017857.1 2041219 2041539 R PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase complement(2041219..2041539) Methylophaga nitratireducenticrescens 12848139 YP_006296452.1 CDS Q7A_1990 NC_017857.1 2042238 2043209 R PFAM: Glutathione S-transferase, C-terminal domain; glutathione S-transferase, omega complement(2042238..2043209) Methylophaga nitratireducenticrescens 12848140 YP_006296453.1 CDS Q7A_1991 NC_017857.1 2043288 2043689 D hypothetical protein 2043288..2043689 Methylophaga nitratireducenticrescens 12848141 YP_006296454.1 CDS Q7A_1992 NC_017857.1 2043745 2046264 D PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecD 2043745..2046264 Methylophaga nitratireducenticrescens 12848142 YP_006296455.1 CDS Q7A_1993 NC_017857.1 2046350 2047405 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG 2046350..2047405 Methylophaga nitratireducenticrescens 12848143 YP_006296456.1 CDS Q7A_1994 NC_017857.1 2047463 2048488 R PFAM: Peptidase family M48; Zn-dependent protease with chaperone function complement(2047463..2048488) Methylophaga nitratireducenticrescens 12848144 YP_006296457.1 CDS Q7A_1995 NC_017857.1 2048491 2049069 R PFAM: LemA family; LemA protein complement(2048491..2049069) Methylophaga nitratireducenticrescens 12848145 YP_006296458.1 CDS Q7A_1996 NC_017857.1 2049216 2049350 D hypothetical protein 2049216..2049350 Methylophaga nitratireducenticrescens 12848146 YP_006296459.1 CDS Q7A_1997 NC_017857.1 2049393 2051051 D PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ABC transporter ATP-binding protein 2049393..2051051 Methylophaga nitratireducenticrescens 12848147 YP_006296460.1 CDS Q7A_1998 NC_017857.1 2051683 2052498 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(2051683..2052498) Methylophaga nitratireducenticrescens 12848148 YP_006296461.1 CDS Q7A_1999 NC_017857.1 2052815 2054515 R PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; sulfite reductase (NADPH) hemoprotein beta-component complement(2052815..2054515) Methylophaga nitratireducenticrescens 12848149 YP_006296462.1 CDS Q7A_2000 NC_017857.1 2054515 2056314 R PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; sulfite reductase (NADPH) flavoprotein alpha-component complement(2054515..2056314) Methylophaga nitratireducenticrescens 12848150 YP_006296463.1 CDS Q7A_2001 NC_017857.1 2056588 2058732 R PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2056588..2058732) Methylophaga nitratireducenticrescens 12848151 YP_006296464.1 CDS Q7A_2002 NC_017857.1 2058790 2062641 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain complement(2058790..2062641) Methylophaga nitratireducenticrescens 12848152 YP_006296465.1 CDS Q7A_2003 NC_017857.1 2062767 2064641 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(2062767..2064641) Methylophaga nitratireducenticrescens 12848153 YP_006296466.1 CDS Q7A_2004 NC_017857.1 2064742 2065377 R PFAM: GDSL-like Lipase/Acylhydrolase; lipolytic protein complement(2064742..2065377) Methylophaga nitratireducenticrescens 12848154 YP_006296467.1 CDS Q7A_2005 NC_017857.1 2065377 2066156 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease complement(2065377..2066156) Methylophaga nitratireducenticrescens 12848155 YP_006296468.1 CDS Q7A_2006 NC_017857.1 2066194 2066475 R PFAM: PilZ domain; type IV pilus assembly protein PilZ complement(2066194..2066475) Methylophaga nitratireducenticrescens 12848156 YP_006296469.1 CDS Q7A_2007 NC_017857.1 2066482 2066595 D hypothetical protein 2066482..2066595 Methylophaga nitratireducenticrescens 12848157 YP_006296470.1 CDS Q7A_2008 NC_017857.1 2066581 2067543 R PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' complement(2066581..2067543) Methylophaga nitratireducenticrescens 12848158 YP_006296471.1 CDS Q7A_2009 NC_017857.1 2067543 2068175 R PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase complement(2067543..2068175) Methylophaga nitratireducenticrescens 12848159 YP_006296472.1 CDS Q7A_2010 NC_017857.1 2068172 2069197 R PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; YceG-like protein complement(2068172..2069197) Methylophaga nitratireducenticrescens 12848160 YP_006296473.1 CDS Q7A_2011 NC_017857.1 2069194 2070024 R PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; Aminodeoxychorismate lyase complement(2069194..2070024) Methylophaga nitratireducenticrescens 12848161 YP_006296474.1 CDS Q7A_2012 NC_017857.1 2070035 2071276 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase complement(2070035..2071276) Methylophaga nitratireducenticrescens 12848162 YP_006296475.1 CDS Q7A_2013 NC_017857.1 2071371 2071607 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(2071371..2071607) Methylophaga nitratireducenticrescens 12848163 YP_006296476.1 CDS Q7A_2014 NC_017857.1 2071745 2072488 R PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase complement(2071745..2072488) Methylophaga nitratireducenticrescens 12848164 YP_006296477.1 CDS Q7A_2015 NC_017857.1 2072485 2073426 R PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2072485..2073426) Methylophaga nitratireducenticrescens 12848165 YP_006296478.1 CDS Q7A_2016 NC_017857.1 2073445 2074404 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase complement(2073445..2074404) Methylophaga nitratireducenticrescens 12848166 YP_006296479.1 CDS Q7A_2017 NC_017857.1 2074401 2075393 R PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-ACP acyltransferase PlsX complement(2074401..2075393) Methylophaga nitratireducenticrescens 12848167 YP_006296480.1 CDS Q7A_2018 NC_017857.1 2075434 2075613 R PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 complement(2075434..2075613) Methylophaga nitratireducenticrescens 12848168 YP_006296481.1 CDS Q7A_2019 NC_017857.1 2075648 2076205 R PFAM: Uncharacterized ACR, COG1399; hypothetical protein complement(2075648..2076205) Methylophaga nitratireducenticrescens 12848169 YP_006296482.1 CDS Q7A_2020 NC_017857.1 2076274 2077782 R PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; Amidophosphoribosyltransferase complement(2076274..2077782) Methylophaga nitratireducenticrescens 12845601 YP_006296483.1 CDS Q7A_2021 NC_017857.1 2077803 2078294 R PFAM: Colicin V production protein; colicin V production protein complement(2077803..2078294) Methylophaga nitratireducenticrescens 12845602 YP_006296484.1 CDS Q7A_2022 NC_017857.1 2078402 2079094 R PFAM: Sporulation related domain; sporulation domain-containing protein complement(2078402..2079094) Methylophaga nitratireducenticrescens 12845603 YP_006296485.1 CDS Q7A_2023 NC_017857.1 2079125 2081560 R PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La; ATP-dependent protease La complement(2079125..2081560) Methylophaga nitratireducenticrescens 12845604 YP_006296486.1 CDS Q7A_2024 NC_017857.1 2081851 2082936 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX complement(2081851..2082936) Methylophaga nitratireducenticrescens 12845605 YP_006296487.1 CDS Q7A_2025 NC_017857.1 2083151 2083786 R PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit complement(2083151..2083786) Methylophaga nitratireducenticrescens 12845606 YP_006296488.1 CDS Q7A_2026 NC_017857.1 2083875 2085173 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; cell division trigger factor complement(2083875..2085173) Methylophaga nitratireducenticrescens 12845607 YP_006296489.1 CDS Q7A_2028 NC_017857.1 2085389 2086831 R PFAM: HDOD domain; GAF-domain containing protein complement(2085389..2086831) Methylophaga nitratireducenticrescens 12845609 YP_006296490.1 CDS Q7A_2029 NC_017857.1 2086828 2087751 R PFAM: 5'-nucleotidase; 5'-nucleotidase complement(2086828..2087751) Methylophaga nitratireducenticrescens 12845610 YP_006296491.1 CDS Q7A_2030 NC_017857.1 2087757 2088344 R PFAM: Nuclease-related domain; nuclease-like protein complement(2087757..2088344) Methylophaga nitratireducenticrescens 12845611 YP_006296492.1 CDS Q7A_2031 NC_017857.1 2088382 2089290 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Cobalt-zinc-cadmium resistance protein complement(2088382..2089290) Methylophaga nitratireducenticrescens 12845612 YP_006296493.1 CDS Q7A_2032 NC_017857.1 2089381 2091012 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase 2089381..2091012 Methylophaga nitratireducenticrescens 12845613 YP_006296494.1 CDS Q7A_2033 NC_017857.1 2091027 2091632 D PFAM: Maf-like protein; TIGRFAM: MAF protein; maf-like protein 2091027..2091632 Methylophaga nitratireducenticrescens 12845614 YP_006296495.1 CDS Q7A_2034 NC_017857.1 2091626 2092027 R hypothetical protein complement(2091626..2092027) Methylophaga nitratireducenticrescens 12845615 YP_006296496.1 CDS Q7A_2035 NC_017857.1 2092189 2093178 D PFAM: Phosphotransferase enzyme family; phosphotransferase 2092189..2093178 Methylophaga nitratireducenticrescens 12845616 YP_006296497.1 CDS Q7A_2036 NC_017857.1 2093175 2093870 D PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 2093175..2093870 Methylophaga nitratireducenticrescens 12845617 YP_006296498.1 CDS Q7A_2037 NC_017857.1 2093847 2094743 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(2093847..2094743) Methylophaga nitratireducenticrescens 12845618 YP_006296499.1 CDS Q7A_2038 NC_017857.1 2094745 2095944 R PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases; acetylornithine aminotransferase complement(2094745..2095944) Methylophaga nitratireducenticrescens 12845619 YP_006296500.1 CDS Q7A_2039 NC_017857.1 2095943 2096074 D hypothetical protein 2095943..2096074 Methylophaga nitratireducenticrescens 12845620 YP_006296501.1 CDS Q7A_2040 NC_017857.1 2096110 2096691 R PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutase (Fe) complement(2096110..2096691) Methylophaga nitratireducenticrescens 12845621 YP_006296502.1 CDS Q7A_2041 NC_017857.1 2096753 2097208 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S18p-alanine acetyltransferase complement(2096753..2097208) Methylophaga nitratireducenticrescens 12845622 YP_006296503.1 CDS Q7A_2042 NC_017857.1 2097225 2097719 R PFAM: DNA polymerase III psi subunit; DNA polymerase III psi subunit complement(2097225..2097719) Methylophaga nitratireducenticrescens 12845623 YP_006296504.1 CDS Q7A_2043 NC_017857.1 2097719 2099251 R PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase complement(2097719..2099251) Methylophaga nitratireducenticrescens 12845624 YP_006296505.1 CDS Q7A_2044 NC_017857.1 2099226 2099342 R hypothetical protein complement(2099226..2099342) Methylophaga nitratireducenticrescens 12845625 YP_006296506.1 CDS Q7A_2045 NC_017857.1 2099418 2100161 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(2099418..2100161) Methylophaga nitratireducenticrescens 12845626 YP_006296507.1 CDS Q7A_2046 NC_017857.1 2100279 2101295 R PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(2100279..2101295) Methylophaga nitratireducenticrescens 12845627 YP_006296508.1 CDS Q7A_2047 NC_017857.1 2101318 2101815 R PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(2101318..2101815) Methylophaga nitratireducenticrescens 12845628 YP_006296509.1 CDS Q7A_2048 NC_017857.1 2101815 2103557 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(2101815..2103557) Methylophaga nitratireducenticrescens 12845629 YP_006296510.1 CDS Q7A_2049 NC_017857.1 2103858 2104775 D PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type; dihydroorotase 2103858..2104775 Methylophaga nitratireducenticrescens 12845630 YP_006296511.1 CDS Q7A_2052 NC_017857.1 2106233 2106910 D PFAM: DJ-1/PfpI family; thiJ/PfpI family protein 2106233..2106910 Methylophaga nitratireducenticrescens 12845632 YP_006296512.1 CDS Q7A_2053 NC_017857.1 2106944 2107225 D PFAM: PPIC-type PPIASE domain; peptidyl-prolyl cis-trans isomerase ppiC 2106944..2107225 Methylophaga nitratireducenticrescens 12845633 YP_006296513.1 CDS Q7A_2054 NC_017857.1 2107269 2109347 R PFAM: DEAD_2; DEAD/DEAH box helicase; ATP-dependent helicase DinG/Rad3 complement(2107269..2109347) Methylophaga nitratireducenticrescens 12845634 YP_006296514.1 CDS Q7A_2055 NC_017857.1 2109348 2110349 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-lactate dehydrogenase complement(2109348..2110349) Methylophaga nitratireducenticrescens 12845635 YP_006296515.1 CDS Q7A_2056 NC_017857.1 2110432 2111382 D PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family; Tagatose-6-phosphate kinase / 1-phosphofructokinase 2110432..2111382 Methylophaga nitratireducenticrescens 12845636 YP_006296516.1 CDS Q7A_2057 NC_017857.1 2111379 2113028 R PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; ssDNA-specific exonuclease RecJ complement(2111379..2113028) Methylophaga nitratireducenticrescens 12845637 YP_006296517.1 CDS Q7A_2058 NC_017857.1 2113100 2114038 R Regulatory protein, RpfE type complement(2113100..2114038) Methylophaga nitratireducenticrescens 12845638 YP_006296518.1 CDS Q7A_2059 NC_017857.1 2114031 2114735 R PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; chromosomal replication initiator protein DnaA complement(2114031..2114735) Methylophaga nitratireducenticrescens 12845639 YP_006296519.1 CDS Q7A_2060 NC_017857.1 2114746 2115792 R PFAM: Domain of unknown function DUF20; permease complement(2114746..2115792) Methylophaga nitratireducenticrescens 12845640 YP_006296520.1 CDS Q7A_2061 NC_017857.1 2115789 2116274 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2115789..2116274) Methylophaga nitratireducenticrescens 12845641 YP_006296521.1 CDS Q7A_2062 NC_017857.1 2116343 2117383 R PFAM: Uncharacterized protein conserved in bacteria (DUF2066); hypothetical protein complement(2116343..2117383) Methylophaga nitratireducenticrescens 12845642 YP_006296522.1 CDS Q7A_2063 NC_017857.1 2117442 2118503 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; Phosphoribosylformylglycinamidine cyclo-ligase 2117442..2118503 Methylophaga nitratireducenticrescens 12845643 YP_006296523.1 CDS Q7A_2064 NC_017857.1 2118500 2119084 D PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylglycinamide formyltransferase 2118500..2119084 Methylophaga nitratireducenticrescens 12845644 YP_006296524.1 CDS Q7A_2065 NC_017857.1 2119124 2119834 D PFAM: Protein of unknown function (DUF3108); hypothetical protein 2119124..2119834 Methylophaga nitratireducenticrescens 12845645 YP_006296525.1 CDS Q7A_2066 NC_017857.1 2119860 2120462 D PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; ADP-ribose pyrophosphatase 2119860..2120462 Methylophaga nitratireducenticrescens 12845646 YP_006296526.1 CDS Q7A_2067 NC_017857.1 2120506 2121414 R PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(2120506..2121414) Methylophaga nitratireducenticrescens 12845647 YP_006296527.1 CDS Q7A_2068 NC_017857.1 2121485 2121967 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD complement(2121485..2121967) Methylophaga nitratireducenticrescens 12845648 YP_006296528.1 CDS Q7A_2069 NC_017857.1 2121977 2122141 R hypothetical protein complement(2121977..2122141) Methylophaga nitratireducenticrescens 12845649 YP_006296529.1 CDS Q7A_2070 NC_017857.1 2123258 2123956 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase E 2123258..2123956 Methylophaga nitratireducenticrescens 12845650 YP_006296530.1 CDS Q7A_2071 NC_017857.1 2124012 2124254 D NUDIX hydrolase 2124012..2124254 Methylophaga nitratireducenticrescens 12845651 YP_006296531.1 CDS Q7A_2072 NC_017857.1 2124257 2125360 D PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 2124257..2125360 Methylophaga nitratireducenticrescens 12845652 YP_006296532.1 CDS Q7A_2073 NC_017857.1 2125357 2125989 D PFAM: Protein of unknown function (DUF489); hypothetical protein 2125357..2125989 Methylophaga nitratireducenticrescens 12845653 YP_006296533.1 CDS Q7A_2074 NC_017857.1 2126162 2127061 D PFAM: Transposase DDE domain; transposase, IS982 family 2126162..2127061 Methylophaga nitratireducenticrescens 12845654 YP_006296534.1 CDS Q7A_2075 NC_017857.1 2127074 2129611 R PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; aconitate hydratase 2 complement(2127074..2129611) Methylophaga nitratireducenticrescens 12845655 YP_006296535.1 CDS Q7A_2076 NC_017857.1 2129750 2131117 D PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 2129750..2131117 Methylophaga nitratireducenticrescens 12845656 YP_006296536.1 CDS Q7A_2077 NC_017857.1 2131118 2131624 D hypothetical protein 2131118..2131624 Methylophaga nitratireducenticrescens 12845657 YP_006296537.1 CDS Q7A_2078 NC_017857.1 2131621 2132403 D secretion system protein 2131621..2132403 Methylophaga nitratireducenticrescens 12845658 YP_006296538.1 CDS Q7A_2079 NC_017857.1 2132373 2133023 D PFAM: Nitroreductase family; Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase 2132373..2133023 Methylophaga nitratireducenticrescens 12845659 YP_006296539.1 CDS Q7A_2080 NC_017857.1 2133024 2134061 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2133024..2134061) Methylophaga nitratireducenticrescens 12845660 YP_006296540.1 CDS Q7A_2081 NC_017857.1 2134086 2135294 R PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase complement(2134086..2135294) Methylophaga nitratireducenticrescens 12845661 YP_006296541.1 CDS Q7A_2082 NC_017857.1 2135346 2136131 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); methyl-directed repair DNA adenine methylase complement(2135346..2136131) Methylophaga nitratireducenticrescens 12845662 YP_006296542.1 CDS Q7A_2083 NC_017857.1 2136243 2138036 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex complement(2136243..2138036) Methylophaga nitratireducenticrescens 12845663 YP_006296543.1 CDS Q7A_2084 NC_017857.1 2138033 2139352 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex complement(2138033..2139352) Methylophaga nitratireducenticrescens 12845664 YP_006296544.1 CDS Q7A_2085 NC_017857.1 2139356 2142010 R PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; pyruvate dehydrogenase E1 component complement(2139356..2142010) Methylophaga nitratireducenticrescens 12845665 YP_006296545.1 CDS Q7A_2086 NC_017857.1 2142190 2142792 R PFAM: Ferric reductase like transmembrane component; hypothetical protein complement(2142190..2142792) Methylophaga nitratireducenticrescens 12845666 YP_006296546.1 CDS Q7A_2087 NC_017857.1 2142792 2143748 R PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase subunit YedY complement(2142792..2143748) Methylophaga nitratireducenticrescens 12845667 YP_006296547.1 CDS Q7A_2088 NC_017857.1 2143735 2144370 R PFAM: DoxX; hypothetical protein complement(2143735..2144370) Methylophaga nitratireducenticrescens 12845668 YP_006296548.1 CDS Q7A_2089 NC_017857.1 2144436 2144729 R hypothetical protein complement(2144436..2144729) Methylophaga nitratireducenticrescens 12845669 YP_006296549.1 CDS Q7A_2090 NC_017857.1 2144924 2145544 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 2144924..2145544 Methylophaga nitratireducenticrescens 12845670 YP_006296550.1 CDS Q7A_2091 NC_017857.1 2145546 2145785 D hypothetical protein 2145546..2145785 Methylophaga nitratireducenticrescens 12845671 YP_006296551.1 CDS Q7A_2092 NC_017857.1 2145818 2146063 R PFAM: Protein of unknown function (DUF1244); hypothetical protein complement(2145818..2146063) Methylophaga nitratireducenticrescens 12845672 YP_006296552.1 CDS Q7A_2093 NC_017857.1 2146041 2148074 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; dipeptide transport ATP-binding protein DppF complement(2146041..2148074) Methylophaga nitratireducenticrescens 12845673 YP_006296553.1 CDS Q7A_2094 NC_017857.1 2148071 2149480 R PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease protein complement(2148071..2149480) Methylophaga nitratireducenticrescens 12845674 YP_006296554.1 CDS Q7A_2095 NC_017857.1 2149489 2150451 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2149489..2150451) Methylophaga nitratireducenticrescens 12845675 YP_006296555.1 CDS Q7A_2096 NC_017857.1 2150452 2151540 R PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; chorismate mutase I / Prephenate dehydratase complement(2150452..2151540) Methylophaga nitratireducenticrescens 12845676 YP_006296556.1 CDS Q7A_2097 NC_017857.1 2151543 2152622 R PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase complement(2151543..2152622) Methylophaga nitratireducenticrescens 12845677 YP_006296557.1 CDS Q7A_2098 NC_017857.1 2152628 2155207 R PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(2152628..2155207) Methylophaga nitratireducenticrescens 12845678 YP_006296558.1 CDS Q7A_2099 NC_017857.1 2155358 2155999 R PFAM: Protein of unknown function (DUF330); ABC transporter auxiliary protein complement(2155358..2155999) Methylophaga nitratireducenticrescens 12845679 YP_006296559.1 CDS Q7A_2100 NC_017857.1 2156109 2156624 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 2156109..2156624 Methylophaga nitratireducenticrescens 12845680 YP_006296560.1 CDS Q7A_2101 NC_017857.1 2156624 2157466 D PFAM: OmpA family; thrombospondin type 3 repeat:OmpA/MotB 2156624..2157466 Methylophaga nitratireducenticrescens 12845681 YP_006296561.1 CDS Q7A_2102 NC_017857.1 2157455 2158924 R PFAM: Phosphomethylpyrimidine kinase; Thiamine monophosphate synthase/TENI; TIGRFAM: phosphomethylpyrimidine kinase; thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase / Thiamin-phosphate pyrophosphorylase complement(2157455..2158924) Methylophaga nitratireducenticrescens 12845682 YP_006296562.1 CDS Q7A_2103 NC_017857.1 2158917 2159714 R PFAM: Thiazole biosynthesis protein ThiG; thiazole biosynthesis protein ThiG complement(2158917..2159714) Methylophaga nitratireducenticrescens 12845766 YP_006296563.1 CDS Q7A_2104 NC_017857.1 2159716 2159931 R PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(2159716..2159931) Methylophaga nitratireducenticrescens 12845767 YP_006296564.1 CDS Q7A_2105 NC_017857.1 2159921 2161000 R PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; glycine oxidase complement(2159921..2161000) Methylophaga nitratireducenticrescens 12845768 YP_006296565.1 CDS Q7A_2106 NC_017857.1 2161013 2162824 R PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; thiamin biosynthesis protein ThiC complement(2161013..2162824) Methylophaga nitratireducenticrescens 12845769 YP_006296566.1 CDS Q7A_2107 NC_017857.1 2163423 2163971 D PFAM: Smr domain; hypothetical protein 2163423..2163971 Methylophaga nitratireducenticrescens 12845770 YP_006296567.1 CDS Q7A_2108 NC_017857.1 2164174 2164950 D PFAM: Predicted nucleotidyltransferase; nucleotidyltransferase 2164174..2164950 Methylophaga nitratireducenticrescens 12845771 YP_006296568.1 CDS Q7A_2109 NC_017857.1 2166198 2169131 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2166198..2169131 Methylophaga nitratireducenticrescens 12845772 YP_006296569.1 CDS Q7A_2110 NC_017857.1 2169137 2170420 R PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2169137..2170420) Methylophaga nitratireducenticrescens 12845773 YP_006296570.1 CDS Q7A_2111 NC_017857.1 2170450 2170569 D hypothetical protein 2170450..2170569 Methylophaga nitratireducenticrescens 12845774 YP_006296571.1 CDS Q7A_2112 NC_017857.1 2170551 2170697 R hypothetical protein complement(2170551..2170697) Methylophaga nitratireducenticrescens 12845775 YP_006296572.1 CDS Q7A_2113 NC_017857.1 2170873 2174199 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2170873..2174199) Methylophaga nitratireducenticrescens 12845776 YP_006296573.1 CDS Q7A_2114 NC_017857.1 2174827 2175309 R hypothetical protein complement(2174827..2175309) Methylophaga nitratireducenticrescens 12845777 YP_006296574.1 CDS Q7A_2115 NC_017857.1 2175364 2176737 R PFAM: Uncharacterized ACR (DUF711); hypothetical protein complement(2175364..2176737) Methylophaga nitratireducenticrescens 12845778 YP_006296575.1 CDS Q7A_2116 NC_017857.1 2176748 2177314 R PFAM: ACT domain; amino acid-binding ACT protein complement(2176748..2177314) Methylophaga nitratireducenticrescens 12845779 YP_006296576.1 CDS Q7A_2117 NC_017857.1 2177546 2177908 R hypothetical protein complement(2177546..2177908) Methylophaga nitratireducenticrescens 12845780 YP_006296577.1 CDS Q7A_2118 NC_017857.1 2178031 2178363 D hypothetical protein 2178031..2178363 Methylophaga nitratireducenticrescens 12845781 YP_006296578.1 CDS Q7A_2119 NC_017857.1 2179001 2179153 R ISSod6 transposase, IS1301 complement(2179001..2179153) Methylophaga nitratireducenticrescens 12845782 YP_006296579.1 CDS Q7A_2120 NC_017857.1 2179218 2179745 R PFAM: Protein of unknown function (DUF2380); hypothetical protein complement(2179218..2179745) Methylophaga nitratireducenticrescens 12845783 YP_006296580.1 CDS Q7A_2121 NC_017857.1 2179848 2180528 R lipase complement(2179848..2180528) Methylophaga nitratireducenticrescens 12845784 YP_006296581.1 CDS Q7A_2122 NC_017857.1 2180674 2181210 R PFAM: Glutathione peroxidase; glutathione peroxidase complement(2180674..2181210) Methylophaga nitratireducenticrescens 12845785 YP_006296582.1 CDS Q7A_2123 NC_017857.1 2181311 2182963 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter ATPase complement(2181311..2182963) Methylophaga nitratireducenticrescens 12845786 YP_006296583.1 CDS Q7A_2124 NC_017857.1 2182960 2184156 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide transport system permease DppC complement(2182960..2184156) Methylophaga nitratireducenticrescens 12845787 YP_006296584.1 CDS Q7A_2125 NC_017857.1 2184149 2185531 R PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease OppB complement(2184149..2185531) Methylophaga nitratireducenticrescens 12845788 YP_006296585.1 CDS Q7A_2126 NC_017857.1 2185811 2187691 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter substrate-binding protein OppA complement(2185811..2187691) Methylophaga nitratireducenticrescens 12845789 YP_006296586.1 CDS Q7A_2127 NC_017857.1 2187865 2188788 R PFAM: Patatin-like phospholipase; Patatin-like phospholipase complement(2187865..2188788) Methylophaga nitratireducenticrescens 12845790 YP_006296587.1 CDS Q7A_2128 NC_017857.1 2188902 2189114 D hypothetical protein 2188902..2189114 Methylophaga nitratireducenticrescens 12845791 YP_006296588.1 CDS Q7A_2129 NC_017857.1 2189129 2190505 R PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; metallo-beta-lactamase-like protein complement(2189129..2190505) Methylophaga nitratireducenticrescens 12845792 YP_006296589.1 CDS Q7A_2130 NC_017857.1 2191487 2191777 D PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; oxaloacetate decarboxylase subunit gamma 2191487..2191777 Methylophaga nitratireducenticrescens 12845793 YP_006296590.1 CDS Q7A_2131 NC_017857.1 2191823 2193607 D PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; oxaloacetate decarboxylase subunit alpha 2191823..2193607 Methylophaga nitratireducenticrescens 12845794 YP_006296591.1 CDS Q7A_2132 NC_017857.1 2193619 2194752 D PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; oxaloacetate decarboxylase subunit beta 2193619..2194752 Methylophaga nitratireducenticrescens 12845795 YP_006296592.1 CDS Q7A_2133 NC_017857.1 2194780 2195178 R hypothetical protein complement(2194780..2195178) Methylophaga nitratireducenticrescens 12845796 YP_006296593.1 CDS Q7A_2134 NC_017857.1 2195367 2195486 D hypothetical protein 2195367..2195486 Methylophaga nitratireducenticrescens 12845797 YP_006296594.1 CDS Q7A_2135 NC_017857.1 2195545 2195766 D PFAM: S4 domain; hypothetical protein 2195545..2195766 Methylophaga nitratireducenticrescens 12845798 YP_006296595.1 CDS Q7A_2136 NC_017857.1 2195878 2196150 D PFAM: Bacterial regulatory protein, arsR family; Arsenical resistance operon repressor 2195878..2196150 Methylophaga nitratireducenticrescens 12845799 YP_006296596.1 CDS Q7A_2137 NC_017857.1 2196187 2196672 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; Arsenate reductase 2196187..2196672 Methylophaga nitratireducenticrescens 12845800 YP_006296597.1 CDS Q7A_2138 NC_017857.1 2196672 2197706 D PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein ACR3 2196672..2197706 Methylophaga nitratireducenticrescens 12845801 YP_006296598.1 CDS Q7A_2139 NC_017857.1 2197703 2198704 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2197703..2198704 Methylophaga nitratireducenticrescens 12845802 YP_006296599.1 CDS Q7A_2140 NC_017857.1 2198706 2199377 R TIGRFAM: DNA alkylation damage repair protein AlkB; alkylated DNA repair protein AlkB complement(2198706..2199377) Methylophaga nitratireducenticrescens 12845803 YP_006296600.1 CDS Q7A_2141 NC_017857.1 2199603 2199770 D hypothetical protein 2199603..2199770 Methylophaga nitratireducenticrescens 12845804 YP_006296601.1 CDS Q7A_2142 NC_017857.1 2199741 2200280 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase complement(2199741..2200280) Methylophaga nitratireducenticrescens 12845805 YP_006296602.1 CDS Q7A_2143 NC_017857.1 2200446 2200853 D hypothetical protein 2200446..2200853 Methylophaga nitratireducenticrescens 12845806 YP_006296603.1 CDS Q7A_2144 NC_017857.1 2201140 2202168 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; flavin oxidoreductase/NADH oxidase 2201140..2202168 Methylophaga nitratireducenticrescens 12845807 YP_006296604.1 CDS Q7A_2145 NC_017857.1 2202550 2204256 D PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; Transporter associated domain; sodium/hydrogen exchanger 2202550..2204256 Methylophaga nitratireducenticrescens 12845808 YP_006296605.1 CDS Q7A_2146 NC_017857.1 2204257 2204901 R PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; multiple antibiotic resistance (MarC)-like protein complement(2204257..2204901) Methylophaga nitratireducenticrescens 12845809 YP_006296606.1 CDS Q7A_2147 NC_017857.1 2204999 2205448 R PFAM: Domain of unknown function (DUF305); hypothetical protein complement(2204999..2205448) Methylophaga nitratireducenticrescens 12845810 YP_006296607.1 CDS Q7A_2148 NC_017857.1 2206130 2207401 R PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) complement(2206130..2207401) Methylophaga nitratireducenticrescens 12845811 YP_006296608.1 CDS Q7A_2149 NC_017857.1 2207403 2207834 R PFAM: Peptidase S24-like; Error-prone repair protein UmuD complement(2207403..2207834) Methylophaga nitratireducenticrescens 12845812 YP_006296609.1 CDS Q7A_2150 NC_017857.1 2208084 2208659 R PFAM: SNARE associated Golgi protein; hypothetical protein complement(2208084..2208659) Methylophaga nitratireducenticrescens 12845813 YP_006296610.1 CDS Q7A_2151 NC_017857.1 2209051 2209578 R hypothetical protein complement(2209051..2209578) Methylophaga nitratireducenticrescens 12845814 YP_006296611.1 CDS Q7A_2152 NC_017857.1 2209778 2210095 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; ribosomal subunit interface protein 2209778..2210095 Methylophaga nitratireducenticrescens 12845815 YP_006296612.1 CDS Q7A_2153 NC_017857.1 2210216 2214079 R PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; Nucleotidyltransferase domain; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; type I restriction-modification system, restriction subunit R complement(2210216..2214079) Methylophaga nitratireducenticrescens 12845816 YP_006296613.1 CDS Q7A_2154 NC_017857.1 2214076 2214486 R PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein complement(2214076..2214486) Methylophaga nitratireducenticrescens 12845817 YP_006296614.1 CDS Q7A_2155 NC_017857.1 2214499 2215737 R PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S complement(2214499..2215737) Methylophaga nitratireducenticrescens 12845818 YP_006296615.1 CDS Q7A_2156 NC_017857.1 2215737 2217332 R PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system, DNA-methyltransferase subunit M complement(2215737..2217332) Methylophaga nitratireducenticrescens 12845819 YP_006296616.1 CDS Q7A_2157 NC_017857.1 2217343 2218347 R PFAM: Fic/DOC family; DNA-binding protein in cluster with Type I restriction-modification system complement(2217343..2218347) Methylophaga nitratireducenticrescens 12845820 YP_006296617.1 CDS Q7A_2158 NC_017857.1 2218406 2219320 R PFAM: Restriction endonuclease; mrr restriction system protein complement(2218406..2219320) Methylophaga nitratireducenticrescens 12845821 YP_006296618.1 CDS Q7A_2159 NC_017857.1 2219443 2220468 R AraC family transcriptional regulator complement(2219443..2220468) Methylophaga nitratireducenticrescens 12845822 YP_006296619.1 CDS Q7A_2160 NC_017857.1 2220473 2221387 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2220473..2221387) Methylophaga nitratireducenticrescens 12845823 YP_006296620.1 CDS Q7A_2161 NC_017857.1 2221759 2224263 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor; TonB-dependent receptor 2221759..2224263 Methylophaga nitratireducenticrescens 12845824 YP_006296621.1 CDS Q7A_2162 NC_017857.1 2224349 2226229 D PFAM: Phytase; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) 2224349..2226229 Methylophaga nitratireducenticrescens 12845825 YP_006296622.1 CDS Q7A_2163 NC_017857.1 2226240 2226941 D PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; motA/TolQ/ExbB proton channel family protein 2226240..2226941 Methylophaga nitratireducenticrescens 12845826 YP_006296623.1 CDS Q7A_2164 NC_017857.1 2226949 2227398 D PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; biopolymer transport protein ExbD/TolR 2226949..2227398 Methylophaga nitratireducenticrescens 12845827 YP_006296624.1 CDS Q7A_2165 NC_017857.1 2227391 2228230 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 2227391..2228230 Methylophaga nitratireducenticrescens 12845828 YP_006296625.1 CDS Q7A_2166 NC_017857.1 2228248 2230221 D PFAM: Bacterial protein of unknown function (DUF839); phosphatase 2228248..2230221 Methylophaga nitratireducenticrescens 12845829 YP_006296626.1 CDS Q7A_2167 NC_017857.1 2230478 2230783 D hypothetical protein 2230478..2230783 Methylophaga nitratireducenticrescens 12845830 YP_006296627.1 CDS Q7A_2168 NC_017857.1 2230796 2231287 R PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator complement(2230796..2231287) Methylophaga nitratireducenticrescens 12845831 YP_006296628.1 CDS Q7A_2169 NC_017857.1 2231412 2231873 D PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase MsrB 2231412..2231873 Methylophaga nitratireducenticrescens 12845832 YP_006296629.1 CDS Q7A_2170 NC_017857.1 2231870 2232370 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; peptide methionine sulfoxide reductase MsrA 2231870..2232370 Methylophaga nitratireducenticrescens 12845833 YP_006296630.1 CDS Q7A_2171 NC_017857.1 2232456 2232881 R hypothetical protein complement(2232456..2232881) Methylophaga nitratireducenticrescens 12845834 YP_006296631.1 CDS Q7A_2172 NC_017857.1 2232859 2233458 R PFAM: Nucleotidyltransferase domain; nucleotidyltransferase complement(2232859..2233458) Methylophaga nitratireducenticrescens 12845835 YP_006296632.1 CDS Q7A_2173 NC_017857.1 2233927 2234046 R hypothetical protein complement(2233927..2234046) Methylophaga nitratireducenticrescens 12845836 YP_006296633.1 CDS Q7A_2174 NC_017857.1 2234474 2235388 R hypothetical protein complement(2234474..2235388) Methylophaga nitratireducenticrescens 12845837 YP_006296634.1 CDS Q7A_2175 NC_017857.1 2235787 2237652 R PFAM: Nuclease-related domain; UvrD/REP helicase; nuclease-like protein complement(2235787..2237652) Methylophaga nitratireducenticrescens 12845838 YP_006296635.1 CDS Q7A_2176 NC_017857.1 2238463 2238954 R PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; tmRNA-binding protein SmpB complement(2238463..2238954) Methylophaga nitratireducenticrescens 12845839 YP_006296636.1 CDS Q7A_2177 NC_017857.1 2239032 2240420 D PFAM: Sodium:neurotransmitter symporter family; Sodium-dependent transporter family protein 2239032..2240420 Methylophaga nitratireducenticrescens 12845840 YP_006296637.1 CDS Q7A_2178 NC_017857.1 2240440 2240880 D PFAM: Polyketide cyclase / dehydrase and lipid transport; oligoketide cyclase/lipid transport protein 2240440..2240880 Methylophaga nitratireducenticrescens 12845841 YP_006296638.1 CDS Q7A_2179 NC_017857.1 2240867 2241193 D PFAM: Uncharacterised protein family (UPF0125); hypothetical protein 2240867..2241193 Methylophaga nitratireducenticrescens 12845842 YP_006296639.1 CDS Q7A_2180 NC_017857.1 2241183 2241989 R PFAM: Protein of unknown function (DUF455); hypothetical protein complement(2241183..2241989) Methylophaga nitratireducenticrescens 12845843 YP_006296640.1 CDS Q7A_2181 NC_017857.1 2241982 2242962 R PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease OppB complement(2241982..2242962) Methylophaga nitratireducenticrescens 12845844 YP_006296641.1 CDS Q7A_2182 NC_017857.1 2243167 2243526 D PFAM: Rhodanese-like domain; hypothetical protein 2243167..2243526 Methylophaga nitratireducenticrescens 12845845 YP_006296642.1 CDS Q7A_2183 NC_017857.1 2243591 2244307 D hypothetical protein 2243591..2244307 Methylophaga nitratireducenticrescens 12845846 YP_006296643.1 CDS Q7A_2184 NC_017857.1 2244388 2245236 D PFAM: Protein of unknown function (DUF692); hypothetical protein 2244388..2245236 Methylophaga nitratireducenticrescens 12845847 YP_006296644.1 CDS Q7A_2185 NC_017857.1 2245220 2245963 D PFAM: Uncharacterized protein conserved in bacteria (DUF2063); hypothetical protein 2245220..2245963 Methylophaga nitratireducenticrescens 12845931 YP_006296645.1 CDS Q7A_2186 NC_017857.1 2246026 2246658 R PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 4-hydroxy-2-ketovalerate aldolase complement(2246026..2246658) Methylophaga nitratireducenticrescens 12845932 YP_006296646.1 CDS Q7A_2187 NC_017857.1 2246690 2248513 R PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase; phosphogluconate dehydratase complement(2246690..2248513) Methylophaga nitratireducenticrescens 12845933 YP_006296647.1 CDS Q7A_2188 NC_017857.1 2248939 2249625 D PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine46-N7-)-methyltransferase 2248939..2249625 Methylophaga nitratireducenticrescens 12845934 YP_006296648.1 CDS Q7A_2189 NC_017857.1 2249705 2251006 D PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); long-chain fatty acid transport protein 2249705..2251006 Methylophaga nitratireducenticrescens 12845935 YP_006296649.1 CDS Q7A_2190 NC_017857.1 2251009 2252823 D PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 2251009..2252823 Methylophaga nitratireducenticrescens 12845936 YP_006296650.1 CDS Q7A_2191 NC_017857.1 2252815 2254119 R PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; dihydrofolate synthase / Folylpolyglutamate synthase complement(2252815..2254119) Methylophaga nitratireducenticrescens 12845937 YP_006296651.1 CDS Q7A_2192 NC_017857.1 2254130 2254987 R PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxyl transferase subunit beta complement(2254130..2254987) Methylophaga nitratireducenticrescens 12845938 YP_006296652.1 CDS Q7A_2193 NC_017857.1 2255007 2255834 R PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha complement(2255007..2255834) Methylophaga nitratireducenticrescens 12845939 YP_006296653.1 CDS Q7A_2194 NC_017857.1 2255845 2257065 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta complement(2255845..2257065) Methylophaga nitratireducenticrescens 12845940 YP_006296654.1 CDS Q7A_2195 NC_017857.1 2257058 2257240 R PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase complement(2257058..2257240) Methylophaga nitratireducenticrescens 12845941 YP_006296655.1 CDS Q7A_2196 NC_017857.1 2257237 2257671 R PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase complement(2257237..2257671) Methylophaga nitratireducenticrescens 12845942 YP_006296656.1 CDS Q7A_2197 NC_017857.1 2257709 2258488 R PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A complement(2257709..2258488) Methylophaga nitratireducenticrescens 12845943 YP_006296657.1 CDS Q7A_2198 NC_017857.1 2258500 2261439 R PFAM: LysM domain; TIGRFAM: FimV C-terminal domain; FimV N-terminal domain; hypothetical protein complement(2258500..2261439) Methylophaga nitratireducenticrescens 12845944 YP_006296658.1 CDS Q7A_2199 NC_017857.1 2261472 2262512 R PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Aspartate-semialdehyde dehydrogenase complement(2261472..2262512) Methylophaga nitratireducenticrescens 12845945 YP_006296659.1 CDS Q7A_2200 NC_017857.1 2262516 2263586 R PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(2262516..2263586) Methylophaga nitratireducenticrescens 12845946 YP_006296660.1 CDS Q7A_2201 NC_017857.1 2263617 2264216 R PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit complement(2263617..2264216) Methylophaga nitratireducenticrescens 12845947 YP_006296661.1 CDS Q7A_2202 NC_017857.1 2264461 2265357 R PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB complement(2264461..2265357) Methylophaga nitratireducenticrescens 12845948 YP_006296662.1 CDS Q7A_2203 NC_017857.1 2265381 2266154 R PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA complement(2265381..2266154) Methylophaga nitratireducenticrescens 12845949 YP_006296663.1 CDS Q7A_2204 NC_017857.1 2266243 2268405 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide-binding ABC transporter, periplasmic substrate-binding component complement(2266243..2268405) Methylophaga nitratireducenticrescens 12845950 YP_006296664.1 CDS Q7A_2205 NC_017857.1 2268520 2269308 D PFAM: short chain dehydrogenase; enoyl-ACP reductase 2268520..2269308 Methylophaga nitratireducenticrescens 12845951 YP_006296665.1 CDS Q7A_2206 NC_017857.1 2269397 2270614 D PFAM: Sodium:dicarboxylate symporter family; proton/glutamate symport protein @ Sodium/glutamate symport protein 2269397..2270614 Methylophaga nitratireducenticrescens 12845952 YP_006296666.1 CDS Q7A_2207 NC_017857.1 2270868 2271122 D hypothetical protein 2270868..2271122 Methylophaga nitratireducenticrescens 12845953 YP_006296667.1 CDS Q7A_2208 NC_017857.1 2271119 2272504 D PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; HipA protein 2271119..2272504 Methylophaga nitratireducenticrescens 12845954 YP_006296668.1 CDS Q7A_2209 NC_017857.1 2272659 2274551 R PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; peptidyl-prolyl cis-trans isomerase ppiD complement(2272659..2274551) Methylophaga nitratireducenticrescens 12845955 YP_006296669.1 CDS Q7A_2212 NC_017857.1 2274803 2275075 R PFAM: Bacterial DNA-binding protein; DNA-binding protein HU-beta complement(2274803..2275075) Methylophaga nitratireducenticrescens 12845958 YP_006296670.1 CDS Q7A_2213 NC_017857.1 2275297 2276091 R PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase complement(2275297..2276091) Methylophaga nitratireducenticrescens 12845959 YP_006296671.1 CDS Q7A_2214 NC_017857.1 2276088 2277083 R PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase complement(2276088..2277083) Methylophaga nitratireducenticrescens 12845960 YP_006296672.1 CDS Q7A_2215 NC_017857.1 2277080 2278345 R PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) complement(2277080..2278345) Methylophaga nitratireducenticrescens 12845961 YP_006296673.1 CDS Q7A_2216 NC_017857.1 2278480 2280726 R PFAM: Organic solvent tolerance protein; OstA-like protein; outer membrane protein Imp complement(2278480..2280726) Methylophaga nitratireducenticrescens 12845962 YP_006296674.1 CDS Q7A_2219 NC_017857.1 2281233 2281919 D hypothetical protein 2281233..2281919 Methylophaga nitratireducenticrescens 12845965 YP_006296675.1 CDS Q7A_2220 NC_017857.1 2281916 2282911 R PFAM: Predicted permease YjgP/YjgQ family; permease complement(2281916..2282911) Methylophaga nitratireducenticrescens 12845966 YP_006296676.1 CDS Q7A_2221 NC_017857.1 2282974 2284050 R PFAM: Predicted permease YjgP/YjgQ family; permease complement(2282974..2284050) Methylophaga nitratireducenticrescens 12845967 YP_006296677.1 CDS Q7A_2222 NC_017857.1 2284191 2285678 D PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; cytosol aminopeptidase 2284191..2285678 Methylophaga nitratireducenticrescens 12845968 YP_006296678.1 CDS Q7A_2223 NC_017857.1 2285689 2286123 D PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi 2285689..2286123 Methylophaga nitratireducenticrescens 12845969 YP_006296679.1 CDS Q7A_2224 NC_017857.1 2286211 2288964 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2286211..2288964 Methylophaga nitratireducenticrescens 12845970 YP_006296680.1 CDS Q7A_2225 NC_017857.1 2289067 2290695 D PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 2289067..2290695 Methylophaga nitratireducenticrescens 12845971 YP_006296681.1 CDS Q7A_2226 NC_017857.1 2290712 2291818 D PFAM: Glucose / Sorbosone dehydrogenase; PQQ-dependent oxidoreductase, gdhB family 2290712..2291818 Methylophaga nitratireducenticrescens 12845972 YP_006296682.1 CDS Q7A_2227 NC_017857.1 2291815 2292282 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB; transcription elongation factor GreB complement(2291815..2292282) Methylophaga nitratireducenticrescens 12845973 YP_006296683.1 CDS Q7A_2228 NC_017857.1 2292282 2293628 R PFAM: FAD dependent oxidoreductase; malate:quinone oxidoreductase complement(2292282..2293628) Methylophaga nitratireducenticrescens 12845974 YP_006296684.1 CDS Q7A_2229 NC_017857.1 2293733 2298082 R hypothetical protein complement(2293733..2298082) Methylophaga nitratireducenticrescens 12845975 YP_006296685.1 CDS Q7A_2230 NC_017857.1 2298083 2299918 R PFAM: von Willebrand factor type A domain; TIGRFAM: TIGR03503 family protein; von Willebrand factor type A-like protein complement(2298083..2299918) Methylophaga nitratireducenticrescens 12845976 YP_006296686.1 CDS Q7A_2231 NC_017857.1 2300006 2301223 R PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase complement(2300006..2301223) Methylophaga nitratireducenticrescens 12845977 YP_006296687.1 CDS Q7A_2232 NC_017857.1 2301390 2303276 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; outer membrane vitamin B12 receptor BtuB complement(2301390..2303276) Methylophaga nitratireducenticrescens 12845978 YP_006296688.1 CDS Q7A_2233 NC_017857.1 2303869 2304444 D Optional hypothetical component of the B12 transporter BtuM 2303869..2304444 Methylophaga nitratireducenticrescens 12845979 YP_006296689.1 CDS Q7A_2234 NC_017857.1 2304444 2305736 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; cobyrinic acid A,C-diamide synthase 2304444..2305736 Methylophaga nitratireducenticrescens 12845980 YP_006296690.1 CDS Q7A_2235 NC_017857.1 2305733 2306395 D PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family 2305733..2306395 Methylophaga nitratireducenticrescens 12845981 YP_006296691.1 CDS Q7A_2236 NC_017857.1 2306392 2307300 D PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; adenosylcobinamide-phosphate synthase 2306392..2307300 Methylophaga nitratireducenticrescens 12845982 YP_006296692.1 CDS Q7A_2237 NC_017857.1 2307293 2308282 D PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; L-threonine 3-O-phosphate decarboxylase 2307293..2308282 Methylophaga nitratireducenticrescens 12845983 YP_006296693.1 CDS Q7A_2238 NC_017857.1 2308279 2309745 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; cobyric acid synthase 2308279..2309745 Methylophaga nitratireducenticrescens 12845984 YP_006296694.1 CDS Q7A_2239 NC_017857.1 2309738 2310256 D PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyltransferase 2309738..2310256 Methylophaga nitratireducenticrescens 12845985 YP_006296695.1 CDS Q7A_2240 NC_017857.1 2310257 2311318 D PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2310257..2311318 Methylophaga nitratireducenticrescens 12845986 YP_006296696.1 CDS Q7A_2241 NC_017857.1 2311315 2312037 D PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin synthase 2311315..2312037 Methylophaga nitratireducenticrescens 12845987 YP_006296697.1 CDS Q7A_2242 NC_017857.1 2312045 2312653 D PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; Cob(I)alamin adenosyltransferase 2312045..2312653 Methylophaga nitratireducenticrescens 12845988 YP_006296698.1 CDS Q7A_2243 NC_017857.1 2313014 2315263 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA complement(2313014..2315263) Methylophaga nitratireducenticrescens 12845989 YP_006296699.1 CDS Q7A_2244 NC_017857.1 2315297 2315635 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2315297..2315635) Methylophaga nitratireducenticrescens 12845990 YP_006296700.1 CDS Q7A_2245 NC_017857.1 2315632 2315943 R PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; glutaredoxin-like protein complement(2315632..2315943) Methylophaga nitratireducenticrescens 12845991 YP_006296701.1 CDS Q7A_2246 NC_017857.1 2316017 2316847 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase complement(2316017..2316847) Methylophaga nitratireducenticrescens 12845992 YP_006296702.1 CDS Q7A_2247 NC_017857.1 2316939 2317466 R PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase complement(2316939..2317466) Methylophaga nitratireducenticrescens 12845993 YP_006296703.1 CDS Q7A_2248 NC_017857.1 2318175 2318984 R PFAM: Sulfite exporter TauE/SafE; permease complement(2318175..2318984) Methylophaga nitratireducenticrescens 12845994 YP_006296704.1 CDS Q7A_2249 NC_017857.1 2319142 2320410 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; MATE efflux protein 2319142..2320410 Methylophaga nitratireducenticrescens 12845995 YP_006296705.1 CDS Q7A_2250 NC_017857.1 2320407 2320607 R hypothetical protein complement(2320407..2320607) Methylophaga nitratireducenticrescens 12845996 YP_006296706.1 CDS Q7A_2251 NC_017857.1 2320698 2321510 R PFAM: RNA pseudouridylate synthase; ribosomal large subunit pseudouridine synthase D complement(2320698..2321510) Methylophaga nitratireducenticrescens 12845997 YP_006296707.1 CDS Q7A_2252 NC_017857.1 2321566 2322024 D hypothetical protein 2321566..2322024 Methylophaga nitratireducenticrescens 12845998 YP_006296708.1 CDS Q7A_2253 NC_017857.1 2322027 2322362 D PFAM: Macrophage migration inhibitory factor (MIF); phenylpyruvate tautomerase, putative 2322027..2322362 Methylophaga nitratireducenticrescens 12845999 YP_006296709.1 CDS Q7A_2254 NC_017857.1 2322434 2324149 D PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase , bacterial type 2322434..2324149 Methylophaga nitratireducenticrescens 12846000 YP_006296710.1 CDS Q7A_2255 NC_017857.1 2324152 2325681 D PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fumarate hydratase class I, aerobic 2324152..2325681 Methylophaga nitratireducenticrescens 12846001 YP_006296711.1 CDS Q7A_2256 NC_017857.1 2325692 2326144 D PFAM: Copper resistance protein D; hypothetical protein 2325692..2326144 Methylophaga nitratireducenticrescens 12846002 YP_006296712.1 CDS Q7A_2257 NC_017857.1 2326206 2326850 D PFAM: Transglycosylase SLT domain; Lytic transglycosylase 2326206..2326850 Methylophaga nitratireducenticrescens 12846003 YP_006296713.1 CDS Q7A_2258 NC_017857.1 2327011 2327625 D PFAM: DUF218 domain; hypothetical protein 2327011..2327625 Methylophaga nitratireducenticrescens 12846004 YP_006296714.1 CDS Q7A_2259 NC_017857.1 2327611 2328132 R PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease complement(2327611..2328132) Methylophaga nitratireducenticrescens 12846005 YP_006296715.1 CDS Q7A_2260 NC_017857.1 2328241 2328921 D PFAM: Protein of unknown function (DUF533); hypothetical protein 2328241..2328921 Methylophaga nitratireducenticrescens 12846006 YP_006296716.1 CDS Q7A_2261 NC_017857.1 2328934 2330502 D hypothetical protein 2328934..2330502 Methylophaga nitratireducenticrescens 12846007 YP_006296717.1 CDS Q7A_2262 NC_017857.1 2330539 2333271 R PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; Cation transporting ATPase, Haloacid dehalogenase-like hydrolase complement(2330539..2333271) Methylophaga nitratireducenticrescens 12846008 YP_006296718.1 CDS Q7A_2263 NC_017857.1 2333440 2334180 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; Nucleoside-diphosphate-sugar epimerase 2333440..2334180 Methylophaga nitratireducenticrescens 12846009 YP_006296719.1 CDS Q7A_2264 NC_017857.1 2334180 2334638 D PFAM: SEC-C motif; hypothetical protein 2334180..2334638 Methylophaga nitratireducenticrescens 12846010 YP_006296720.1 CDS Q7A_2265 NC_017857.1 2334643 2336358 R PFAM: Acyltransferase; hemolysin complement(2334643..2336358) Methylophaga nitratireducenticrescens 12846011 YP_006296721.1 CDS Q7A_2266 NC_017857.1 2336476 2336856 R PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase complement(2336476..2336856) Methylophaga nitratireducenticrescens 12846012 YP_006296722.1 CDS Q7A_2267 NC_017857.1 2336908 2337762 R PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; Pantoate--beta-alanine ligase complement(2336908..2337762) Methylophaga nitratireducenticrescens 12846076 YP_006296723.1 CDS Q7A_2268 NC_017857.1 2337762 2338556 R PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2337762..2338556) Methylophaga nitratireducenticrescens 12846077 YP_006296724.1 CDS Q7A_2269 NC_017857.1 2338553 2339212 R PFAM: Deoxynucleoside kinase; deoxyadenosine kinase / Deoxyguanosine kinase complement(2338553..2339212) Methylophaga nitratireducenticrescens 12846078 YP_006296725.1 CDS Q7A_2270 NC_017857.1 2339209 2339697 R PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2339209..2339697) Methylophaga nitratireducenticrescens 12846079 YP_006296726.1 CDS Q7A_2271 NC_017857.1 2339697 2341070 R PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; Poly(A) polymerase complement(2339697..2341070) Methylophaga nitratireducenticrescens 12846080 YP_006296727.1 CDS Q7A_2272 NC_017857.1 2341122 2341694 R PFAM: Ribonuclease HII; ribonuclease HII complement(2341122..2341694) Methylophaga nitratireducenticrescens 12846081 YP_006296728.1 CDS Q7A_2273 NC_017857.1 2341694 2342824 R PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-A-disaccharide synthase complement(2341694..2342824) Methylophaga nitratireducenticrescens 12846082 YP_006296729.1 CDS Q7A_2274 NC_017857.1 2342835 2343941 R PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2342835..2343941) Methylophaga nitratireducenticrescens 12846083 YP_006296730.1 CDS Q7A_2275 NC_017857.1 2343942 2344583 R PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(2343942..2344583) Methylophaga nitratireducenticrescens 12846084 YP_006296731.1 CDS Q7A_2276 NC_017857.1 2344586 2345683 R PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase complement(2344586..2345683) Methylophaga nitratireducenticrescens 12846085 YP_006296732.1 CDS Q7A_2277 NC_017857.1 2345771 2346244 R PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; ribonucleotide reductase transcriptional regulator NrdR complement(2345771..2346244) Methylophaga nitratireducenticrescens 12846086 YP_006296733.1 CDS Q7A_2278 NC_017857.1 2346259 2347512 R PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(2346259..2347512) Methylophaga nitratireducenticrescens 12846087 YP_006296734.1 CDS Q7A_2279 NC_017857.1 2347617 2348480 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 2-hydroxy-3-oxopropionate reductase 2347617..2348480 Methylophaga nitratireducenticrescens 12846088 YP_006296735.1 CDS Q7A_2280 NC_017857.1 2348538 2349833 R PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase complement(2348538..2349833) Methylophaga nitratireducenticrescens 12846089 YP_006296736.1 CDS Q7A_2281 NC_017857.1 2349826 2351016 R TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; ATP phosphoribosyltransferase regulatory subunit complement(2349826..2351016) Methylophaga nitratireducenticrescens 12846090 YP_006296737.1 CDS Q7A_2282 NC_017857.1 2351022 2351174 R PFAM: Uncharacterized protein conserved in bacteria (DUF2065); hypothetical protein complement(2351022..2351174) Methylophaga nitratireducenticrescens 12846091 YP_006296738.1 CDS Q7A_2283 NC_017857.1 2351216 2352088 R PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein complement(2351216..2352088) Methylophaga nitratireducenticrescens 12846092 YP_006296739.1 CDS Q7A_2284 NC_017857.1 2352091 2353299 R PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein complement(2352091..2353299) Methylophaga nitratireducenticrescens 12846093 YP_006296740.1 CDS Q7A_2285 NC_017857.1 2353394 2354539 R PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX complement(2353394..2354539) Methylophaga nitratireducenticrescens 12846094 YP_006296741.1 CDS Q7A_2286 NC_017857.1 2354553 2354777 R PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq complement(2354553..2354777) Methylophaga nitratireducenticrescens 12846095 YP_006296742.1 CDS Q7A_2287 NC_017857.1 2354854 2355810 R PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2354854..2355810) Methylophaga nitratireducenticrescens 12846096 YP_006296743.1 CDS Q7A_2288 NC_017857.1 2355819 2357078 R PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho complement(2355819..2357078) Methylophaga nitratireducenticrescens 12846097 YP_006296744.1 CDS Q7A_2289 NC_017857.1 2357328 2357891 D PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; Starvation lipoprotein Slp-like protein 2357328..2357891 Methylophaga nitratireducenticrescens 12846098 YP_006296745.1 CDS Q7A_2294 NC_017857.1 2362615 2362737 R hypothetical protein complement(2362615..2362737) Methylophaga nitratireducenticrescens 12846103 YP_006296746.1 CDS Q7A_2297 NC_017857.1 2364788 2365114 R PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 complement(2364788..2365114) Methylophaga nitratireducenticrescens 12846106 YP_006296747.1 CDS Q7A_2298 NC_017857.1 2365210 2366193 R PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha complement(2365210..2366193) Methylophaga nitratireducenticrescens 12846107 YP_006296748.1 CDS Q7A_2299 NC_017857.1 2366234 2366854 R PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 complement(2366234..2366854) Methylophaga nitratireducenticrescens 12846108 YP_006296749.1 CDS Q7A_2300 NC_017857.1 2366876 2367265 R PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 complement(2366876..2367265) Methylophaga nitratireducenticrescens 12846109 YP_006296750.1 CDS Q7A_2301 NC_017857.1 2367280 2367633 R PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 complement(2367280..2367633) Methylophaga nitratireducenticrescens 12846110 YP_006296751.1 CDS Q7A_2302 NC_017857.1 2367863 2369215 R PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(2367863..2369215) Methylophaga nitratireducenticrescens 12846111 YP_006296752.1 CDS Q7A_2303 NC_017857.1 2369221 2369655 R PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 complement(2369221..2369655) Methylophaga nitratireducenticrescens 12846112 YP_006296753.1 CDS Q7A_2304 NC_017857.1 2369658 2369846 R PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 complement(2369658..2369846) Methylophaga nitratireducenticrescens 12846113 YP_006296754.1 CDS Q7A_2305 NC_017857.1 2369851 2370360 R PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 complement(2369851..2370360) Methylophaga nitratireducenticrescens 12846114 YP_006296755.1 CDS Q7A_2306 NC_017857.1 2370379 2370732 R PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 complement(2370379..2370732) Methylophaga nitratireducenticrescens 12846115 YP_006296756.1 CDS Q7A_2307 NC_017857.1 2370745 2371278 R PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 complement(2370745..2371278) Methylophaga nitratireducenticrescens 12846116 YP_006296757.1 CDS Q7A_2308 NC_017857.1 2371302 2371697 R PFAM: Ribosomal protein S8; 30S ribosomal protein S8 complement(2371302..2371697) Methylophaga nitratireducenticrescens 12846117 YP_006296758.1 CDS Q7A_2309 NC_017857.1 2371728 2372033 R PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 complement(2371728..2372033) Methylophaga nitratireducenticrescens 12846118 YP_006296759.1 CDS Q7A_2310 NC_017857.1 2372057 2372596 R PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 complement(2372057..2372596) Methylophaga nitratireducenticrescens 12846119 YP_006296760.1 CDS Q7A_2311 NC_017857.1 2372618 2372935 R TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 complement(2372618..2372935) Methylophaga nitratireducenticrescens 12846120 YP_006296761.1 CDS Q7A_2312 NC_017857.1 2373059 2373319 R PFAM: Ribosomal protein L14p/L23e; 50S ribosomal protein L14 complement(2373059..2373319) Methylophaga nitratireducenticrescens 12846121 YP_006296762.1 CDS Q7A_2313 NC_017857.1 2373347 2373607 R PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 complement(2373347..2373607) Methylophaga nitratireducenticrescens 12846122 YP_006296763.1 CDS Q7A_2314 NC_017857.1 2373617 2373802 R PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 complement(2373617..2373802) Methylophaga nitratireducenticrescens 12846123 YP_006296764.1 CDS Q7A_2315 NC_017857.1 2373802 2374215 R PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 complement(2373802..2374215) Methylophaga nitratireducenticrescens 12846124 YP_006296765.1 CDS Q7A_2316 NC_017857.1 2374227 2374793 R PFAM: KH domain; Ribosomal protein S3, C-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 complement(2374227..2374793) Methylophaga nitratireducenticrescens 12846125 YP_006296766.1 CDS Q7A_2317 NC_017857.1 2374899 2375231 R PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 complement(2374899..2375231) Methylophaga nitratireducenticrescens 12846126 YP_006296767.1 CDS Q7A_2318 NC_017857.1 2375241 2375402 R PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 complement(2375241..2375402) Methylophaga nitratireducenticrescens 12846127 YP_006296768.1 CDS Q7A_2319 NC_017857.1 2375534 2376361 R PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 complement(2375534..2376361) Methylophaga nitratireducenticrescens 12846128 YP_006296769.1 CDS Q7A_2320 NC_017857.1 2376388 2376681 R PFAM: Ribosomal protein L23; 50S ribosomal protein L23 complement(2376388..2376681) Methylophaga nitratireducenticrescens 12846129 YP_006296770.1 CDS Q7A_2321 NC_017857.1 2376678 2377295 R PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 complement(2376678..2377295) Methylophaga nitratireducenticrescens 12846130 YP_006296771.1 CDS Q7A_2322 NC_017857.1 2377319 2377951 R PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 complement(2377319..2377951) Methylophaga nitratireducenticrescens 12846131 YP_006296772.1 CDS Q7A_2323 NC_017857.1 2377965 2378279 R PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 complement(2377965..2378279) Methylophaga nitratireducenticrescens 12846132 YP_006296773.1 CDS Q7A_2324 NC_017857.1 2378285 2379475 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu complement(2378285..2379475) Methylophaga nitratireducenticrescens 12846133 YP_006296774.1 CDS Q7A_2325 NC_017857.1 2379500 2381554 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G complement(2379500..2381554) Methylophaga nitratireducenticrescens 12846134 YP_006296775.1 CDS Q7A_2326 NC_017857.1 2381674 2382144 R PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 complement(2381674..2382144) Methylophaga nitratireducenticrescens 12846135 YP_006296776.1 CDS Q7A_2327 NC_017857.1 2382191 2382565 R PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 complement(2382191..2382565) Methylophaga nitratireducenticrescens 12846136 YP_006296777.1 CDS Q7A_2328 NC_017857.1 2382719 2386912 R PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' complement(2382719..2386912) Methylophaga nitratireducenticrescens 12846137 YP_006296778.1 CDS Q7A_2329 NC_017857.1 2386968 2391044 R PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(2386968..2391044) Methylophaga nitratireducenticrescens 12846138 YP_006296779.1 CDS Q7A_2330 NC_017857.1 2391214 2391588 R PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(2391214..2391588) Methylophaga nitratireducenticrescens 12846139 YP_006296780.1 CDS Q7A_2331 NC_017857.1 2391647 2392174 R PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(2391647..2392174) Methylophaga nitratireducenticrescens 12846140 YP_006296781.1 CDS Q7A_2332 NC_017857.1 2392386 2393078 R PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 complement(2392386..2393078) Methylophaga nitratireducenticrescens 12846141 YP_006296782.1 CDS Q7A_2333 NC_017857.1 2393079 2393513 R PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 complement(2393079..2393513) Methylophaga nitratireducenticrescens 12846142 YP_006296783.1 CDS Q7A_2334 NC_017857.1 2393589 2394122 R PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein NusG complement(2393589..2394122) Methylophaga nitratireducenticrescens 12846143 YP_006296784.1 CDS Q7A_2335 NC_017857.1 2394136 2394474 R PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE complement(2394136..2394474) Methylophaga nitratireducenticrescens 12846144 YP_006296785.1 CDS Q7A_2337 NC_017857.1 2394643 2395833 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu complement(2394643..2395833) Methylophaga nitratireducenticrescens 12846146 YP_006296786.1 CDS Q7A_2341 NC_017857.1 2396360 2396905 D PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease HslV 2396360..2396905 Methylophaga nitratireducenticrescens 12846150 YP_006296787.1 CDS Q7A_2342 NC_017857.1 2396905 2398233 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; ATP-dependent hsl protease ATP-binding subunit HslU 2396905..2398233 Methylophaga nitratireducenticrescens 12846151 YP_006296788.1 CDS Q7A_2343 NC_017857.1 2398242 2398607 D PFAM: Protein of unknown function (DUF971); hypothetical protein 2398242..2398607 Methylophaga nitratireducenticrescens 12846152 YP_006296789.1 CDS Q7A_2344 NC_017857.1 2398615 2399361 D PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 2398615..2399361 Methylophaga nitratireducenticrescens 12846153 YP_006296790.1 CDS Q7A_2345 NC_017857.1 2399365 2399967 D PFAM: SCP-2 sterol transfer family; protein YigP 2399365..2399967 Methylophaga nitratireducenticrescens 12846154 YP_006296791.1 CDS Q7A_2346 NC_017857.1 2399964 2401631 D PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; Ubiquinone biosynthesis monooxygenase UbiB 2399964..2401631 Methylophaga nitratireducenticrescens 12846155 YP_006296792.1 CDS Q7A_2347 NC_017857.1 2401632 2403299 R PFAM: Formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase complement(2401632..2403299) Methylophaga nitratireducenticrescens 12846156 YP_006296793.1 CDS Q7A_2348 NC_017857.1 2403372 2403980 R PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX complement(2403372..2403980) Methylophaga nitratireducenticrescens 12846157 YP_006296794.1 CDS Q7A_2349 NC_017857.1 2403973 2405328 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(2403973..2405328) Methylophaga nitratireducenticrescens 12846220 YP_006296795.1 CDS Q7A_2350 NC_017857.1 2405329 2405841 R hypothetical protein complement(2405329..2405841) Methylophaga nitratireducenticrescens 12846221 YP_006296796.1 CDS Q7A_2351 NC_017857.1 2405964 2406920 R PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat; PQQ-dependent catabolism-associated beta-propeller protein complement(2405964..2406920) Methylophaga nitratireducenticrescens 12846222 YP_006296797.1 CDS Q7A_2352 NC_017857.1 2406943 2407182 R hypothetical protein complement(2406943..2407182) Methylophaga nitratireducenticrescens 12846223 YP_006296798.1 CDS Q7A_2353 NC_017857.1 2407654 2407905 D hypothetical protein 2407654..2407905 Methylophaga nitratireducenticrescens 12846224 YP_006296799.1 CDS Q7A_2354 NC_017857.1 2408375 2409325 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecF complement(2408375..2409325) Methylophaga nitratireducenticrescens 12846225 YP_006296800.1 CDS Q7A_2355 NC_017857.1 2409342 2411198 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD complement(2409342..2411198) Methylophaga nitratireducenticrescens 12846226 YP_006296801.1 CDS Q7A_2356 NC_017857.1 2411248 2411577 R PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(2411248..2411577) Methylophaga nitratireducenticrescens 12846227 YP_006296802.1 CDS Q7A_2357 NC_017857.1 2411652 2412758 R PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase complement(2411652..2412758) Methylophaga nitratireducenticrescens 12846228 YP_006296803.1 CDS Q7A_2358 NC_017857.1 2412881 2413573 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; Orotidine 5'-phosphate decarboxylase 2412881..2413573 Methylophaga nitratireducenticrescens 12846229 YP_006296804.1 CDS Q7A_2359 NC_017857.1 2413646 2414803 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(2413646..2414803) Methylophaga nitratireducenticrescens 12846230 YP_006296805.1 CDS Q7A_2360 NC_017857.1 2414879 2416150 R PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK complement(2414879..2416150) Methylophaga nitratireducenticrescens 12846231 YP_006296806.1 CDS Q7A_2361 NC_017857.1 2416233 2417579 R PFAM: Globin; Methyl-accepting chemotaxis protein (MCP) signaling domain; hemoglobin complement(2416233..2417579) Methylophaga nitratireducenticrescens 12846232 YP_006296807.1 CDS Q7A_2362 NC_017857.1 2417579 2418295 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning protein transcriptional regulator complement(2417579..2418295) Methylophaga nitratireducenticrescens 12846233 YP_006296808.1 CDS Q7A_2363 NC_017857.1 2418299 2418763 R PFAM: CheW-like domain; chemotaxis signal transduction protein complement(2418299..2418763) Methylophaga nitratireducenticrescens 12846234 YP_006296809.1 CDS Q7A_2364 NC_017857.1 2418760 2420652 R PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; signal transduction histidine kinase complement(2418760..2420652) Methylophaga nitratireducenticrescens 12846235 YP_006296810.1 CDS Q7A_2365 NC_017857.1 2420665 2421027 R PFAM: Response regulator receiver domain; chemotaxis regulator complement(2420665..2421027) Methylophaga nitratireducenticrescens 12846236 YP_006296811.1 CDS Q7A_2366 NC_017857.1 2421029 2421277 R PFAM: STAS domain; anti-anti-sigma regulatory factor complement(2421029..2421277) Methylophaga nitratireducenticrescens 12846237 YP_006296812.1 CDS Q7A_2367 NC_017857.1 2421483 2421899 R PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar protein FliJ complement(2421483..2421899) Methylophaga nitratireducenticrescens 12846238 YP_006296813.1 CDS Q7A_2368 NC_017857.1 2421964 2423382 R PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; flagellum-specific ATP synthase FliI complement(2421964..2423382) Methylophaga nitratireducenticrescens 12846239 YP_006296814.1 CDS Q7A_2369 NC_017857.1 2423369 2424055 R PFAM: Flagellar assembly protein FliH; flagellar assembly protein FliH complement(2423369..2424055) Methylophaga nitratireducenticrescens 12846240 YP_006296815.1 CDS Q7A_2370 NC_017857.1 2424042 2425052 R PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(2424042..2425052) Methylophaga nitratireducenticrescens 12846241 YP_006296816.1 CDS Q7A_2371 NC_017857.1 2425052 2426743 R PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar M-ring protein FliF complement(2425052..2426743) Methylophaga nitratireducenticrescens 12846242 YP_006296817.1 CDS Q7A_2372 NC_017857.1 2426773 2427105 R PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE complement(2426773..2427105) Methylophaga nitratireducenticrescens 12846243 YP_006296818.1 CDS Q7A_2373 NC_017857.1 2427148 2428533 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ complement(2427148..2428533) Methylophaga nitratireducenticrescens 12846244 YP_006296819.1 CDS Q7A_2374 NC_017857.1 2428530 2429717 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; flagellar sensor histidine kinase FleS complement(2428530..2429717) Methylophaga nitratireducenticrescens 12846245 YP_006296820.1 CDS Q7A_2375 NC_017857.1 2429846 2431333 R PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ complement(2429846..2431333) Methylophaga nitratireducenticrescens 12846246 YP_006296821.1 CDS Q7A_2376 NC_017857.1 2431474 2431791 R PFAM: Flagellar protein FliT; flagellar protein FliT complement(2431474..2431791) Methylophaga nitratireducenticrescens 12846247 YP_006296822.1 CDS Q7A_2377 NC_017857.1 2431798 2432187 R PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthesis protein FliS complement(2431798..2432187) Methylophaga nitratireducenticrescens 12846248 YP_006296823.1 CDS Q7A_2378 NC_017857.1 2432217 2433578 R PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif; flagellar hook-associated protein FliD complement(2432217..2433578) Methylophaga nitratireducenticrescens 12846249 YP_006296824.1 CDS Q7A_2379 NC_017857.1 2433626 2434027 R PFAM: FlaG protein; flagellar protein FlaG protein complement(2433626..2434027) Methylophaga nitratireducenticrescens 12846250 YP_006296825.1 CDS Q7A_2380 NC_017857.1 2434095 2434928 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaA complement(2434095..2434928) Methylophaga nitratireducenticrescens 12846251 YP_006296826.1 CDS Q7A_2381 NC_017857.1 2435116 2435952 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaA complement(2435116..2435952) Methylophaga nitratireducenticrescens 12846252 YP_006296827.1 CDS Q7A_2382 NC_017857.1 2436114 2440289 R PFAM: Glycosyl transferase family 2; glycosyl transferase complement(2436114..2440289) Methylophaga nitratireducenticrescens 12846253 YP_006296828.1 CDS Q7A_2383 NC_017857.1 2440332 2441126 R PFAM: Cephalosporin hydroxylase; cephalosporin hydroxylase complement(2440332..2441126) Methylophaga nitratireducenticrescens 12846254 YP_006296829.1 CDS Q7A_2384 NC_017857.1 2441159 2442262 R TIGRFAM: methyltransferase, FkbM family; methyltransferase complement(2441159..2442262) Methylophaga nitratireducenticrescens 12846255 YP_006296830.1 CDS Q7A_2385 NC_017857.1 2442291 2443454 R PFAM: Methyltransferase domain; type 12 methyltransferase complement(2442291..2443454) Methylophaga nitratireducenticrescens 12846256 YP_006296831.1 CDS Q7A_2386 NC_017857.1 2443459 2444478 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; Fe-S oxidoreductase complement(2443459..2444478) Methylophaga nitratireducenticrescens 12846257 YP_006296832.1 CDS Q7A_2387 NC_017857.1 2444468 2445667 R TIGRFAM: methyltransferase, FkbM family; methyltransferase complement(2444468..2445667) Methylophaga nitratireducenticrescens 12846258 YP_006296833.1 CDS Q7A_2388 NC_017857.1 2445661 2446941 R PFAM: Glycosyl transferases group 1; glycosyl transferase complement(2445661..2446941) Methylophaga nitratireducenticrescens 12846259 YP_006296834.1 CDS Q7A_2389 NC_017857.1 2446941 2447963 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; hypothetical protein complement(2446941..2447963) Methylophaga nitratireducenticrescens 12846260 YP_006296835.1 CDS Q7A_2390 NC_017857.1 2447988 2448833 R PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase complement(2447988..2448833) Methylophaga nitratireducenticrescens 12846261 YP_006296836.1 CDS Q7A_2391 NC_017857.1 2448830 2450056 R PFAM: C-methyltransferase; Hypothetical methyltransferase; methyltransferase family protein complement(2448830..2450056) Methylophaga nitratireducenticrescens 12846262 YP_006296837.1 CDS Q7A_2392 NC_017857.1 2450053 2450610 R PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2450053..2450610) Methylophaga nitratireducenticrescens 12846263 YP_006296838.1 CDS Q7A_2393 NC_017857.1 2450607 2451707 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase-like protein complement(2450607..2451707) Methylophaga nitratireducenticrescens 12846264 YP_006296839.1 CDS Q7A_2394 NC_017857.1 2451671 2452438 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase complement(2451671..2452438) Methylophaga nitratireducenticrescens 12846265 YP_006296840.1 CDS Q7A_2395 NC_017857.1 2452475 2453380 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein FlgL complement(2452475..2453380) Methylophaga nitratireducenticrescens 12846266 YP_006296841.1 CDS Q7A_2396 NC_017857.1 2453392 2454783 R PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK complement(2453392..2454783) Methylophaga nitratireducenticrescens 12846267 YP_006296842.1 CDS Q7A_2397 NC_017857.1 2454815 2455786 R PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; flagellar protein FlgJ (peptidoglycan hydrolase) complement(2454815..2455786) Methylophaga nitratireducenticrescens 12846268 YP_006296843.1 CDS Q7A_2398 NC_017857.1 2455793 2456890 R PFAM: Flagellar P-ring protein; flagellar P-ring protein FlgI complement(2455793..2456890) Methylophaga nitratireducenticrescens 12846269 YP_006296844.1 CDS Q7A_2399 NC_017857.1 2456901 2457728 R PFAM: Flagellar L-ring protein; flagellar L-ring protein FlgH complement(2456901..2457728) Methylophaga nitratireducenticrescens 12846270 YP_006296845.1 CDS Q7A_2400 NC_017857.1 2457762 2458547 R PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG complement(2457762..2458547) Methylophaga nitratireducenticrescens 12846271 YP_006296846.1 CDS Q7A_2401 NC_017857.1 2458581 2459324 R PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgF complement(2458581..2459324) Methylophaga nitratireducenticrescens 12846272 YP_006296847.1 CDS Q7A_2402 NC_017857.1 2459370 2460656 R PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook protein FlgE complement(2459370..2460656) Methylophaga nitratireducenticrescens 12846273 YP_006296848.1 CDS Q7A_2403 NC_017857.1 2460669 2461355 R PFAM: Flagellar hook capping protein; flagellar basal-body rod modification protein FlgD complement(2460669..2461355) Methylophaga nitratireducenticrescens 12846274 YP_006296849.1 CDS Q7A_2404 NC_017857.1 2461374 2461787 R PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(2461374..2461787) Methylophaga nitratireducenticrescens 12846275 YP_006296850.1 CDS Q7A_2405 NC_017857.1 2461794 2462195 R PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(2461794..2462195) Methylophaga nitratireducenticrescens 12846276 YP_006296851.1 CDS Q7A_2406 NC_017857.1 2462525 2463079 D PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H; type IV fimbrial biogenesis protein FimT 2462525..2463079 Methylophaga nitratireducenticrescens 12846277 YP_006296852.1 CDS Q7A_2407 NC_017857.1 2463073 2463543 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilV 2463073..2463543 Methylophaga nitratireducenticrescens 12846278 YP_006296853.1 CDS Q7A_2408 NC_017857.1 2463540 2464604 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilW 2463540..2464604 Methylophaga nitratireducenticrescens 12846279 YP_006296854.1 CDS Q7A_2409 NC_017857.1 2464613 2465140 D type IV fimbrial biogenesis protein PilX 2464613..2465140 Methylophaga nitratireducenticrescens 12846280 YP_006296855.1 CDS Q7A_2410 NC_017857.1 2465143 2468682 D PFAM: Neisseria PilC protein; type IV fimbrial biogenesis protein PilY1 2465143..2468682 Methylophaga nitratireducenticrescens 12846281 YP_006296856.1 CDS Q7A_2411 NC_017857.1 2468701 2468997 D hypothetical protein 2468701..2468997 Methylophaga nitratireducenticrescens 12846282 YP_006296857.1 CDS Q7A_2412 NC_017857.1 2469012 2469401 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilus assembly protein PilE 2469012..2469401 Methylophaga nitratireducenticrescens 12846283 YP_006296858.1 CDS Q7A_2413 NC_017857.1 2469481 2470284 R PFAM: Transposase DDE domain; transposase, IS982 family complement(2469481..2470284) Methylophaga nitratireducenticrescens 12846284 YP_006296859.1 CDS Q7A_2414 NC_017857.1 2470415 2472418 R TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); hemagglutinin/hemolysin-like protein complement(2470415..2472418) Methylophaga nitratireducenticrescens 12846285 YP_006296860.1 CDS Q7A_2415 NC_017857.1 2472649 2473071 R hypothetical protein complement(2472649..2473071) Methylophaga nitratireducenticrescens 12846286 YP_006296861.1 CDS Q7A_2416 NC_017857.1 2473068 2473682 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator SlmA complement(2473068..2473682) Methylophaga nitratireducenticrescens 12846287 YP_006296862.1 CDS Q7A_2417 NC_017857.1 2473679 2474584 R PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; acetylglutamate kinase complement(2473679..2474584) Methylophaga nitratireducenticrescens 12846288 YP_006296863.1 CDS Q7A_2418 NC_017857.1 2474695 2476938 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(2474695..2476938) Methylophaga nitratireducenticrescens 12846289 YP_006296864.1 CDS Q7A_2419 NC_017857.1 2477013 2477381 R PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase complement(2477013..2477381) Methylophaga nitratireducenticrescens 12846290 YP_006296865.1 CDS Q7A_2420 NC_017857.1 2477449 2478669 R PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase complement(2477449..2478669) Methylophaga nitratireducenticrescens 12846291 YP_006296866.1 CDS Q7A_2421 NC_017857.1 2478666 2480000 R PFAM: Ribonuclease BN-like family; Transcriptional regulator; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN complement(2478666..2480000) Methylophaga nitratireducenticrescens 12846292 YP_006296867.1 CDS Q7A_2422 NC_017857.1 2480033 2480791 R PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein complement(2480033..2480791) Methylophaga nitratireducenticrescens 12846293 YP_006296868.1 CDS Q7A_2423 NC_017857.1 2480843 2481526 D transmembrane protein 2480843..2481526 Methylophaga nitratireducenticrescens 12846294 YP_006296869.1 CDS Q7A_2424 NC_017857.1 2481523 2482356 R PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; chemotaxis protein methyltransferase CheR complement(2481523..2482356) Methylophaga nitratireducenticrescens 12846295 YP_006296870.1 CDS Q7A_2425 NC_017857.1 2482459 2483325 D PFAM: short chain dehydrogenase; NAD(P)-dependent oxidoreductase EC-YbbO 2482459..2483325 Methylophaga nitratireducenticrescens 12846296 YP_006296871.1 CDS Q7A_2426 NC_017857.1 2483312 2483470 D hypothetical protein 2483312..2483470 Methylophaga nitratireducenticrescens 12846297 YP_006296872.1 CDS Q7A_2427 NC_017857.1 2483479 2483751 R PFAM: Transposase; ISxac3 transposase complement(2483479..2483751) Methylophaga nitratireducenticrescens 12846298 YP_006296873.1 CDS Q7A_2428 NC_017857.1 2484213 2485040 D PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; nitrite transporter from formate/nitrite family 2484213..2485040 Methylophaga nitratireducenticrescens 12846299 YP_006296874.1 CDS Q7A_2429 NC_017857.1 2485115 2485555 D PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase; cyanate hydratase 2485115..2485555 Methylophaga nitratireducenticrescens 12846300 YP_006296875.1 CDS Q7A_2430 NC_017857.1 2485594 2486442 R PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate efflux transporter complement(2485594..2486442) Methylophaga nitratireducenticrescens 12846301 YP_006296876.1 CDS Q7A_2431 NC_017857.1 2486731 2489316 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; clpB protein complement(2486731..2489316) Methylophaga nitratireducenticrescens 12846302 YP_006296877.1 CDS Q7A_2432 NC_017857.1 2489482 2490405 D PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 2489482..2490405 Methylophaga nitratireducenticrescens 12846303 YP_006296878.1 CDS Q7A_2433 NC_017857.1 2490537 2491496 D PFAM: Protein of unknown function (DUF1022); hypothetical protein 2490537..2491496 Methylophaga nitratireducenticrescens 12846304 YP_006296879.1 CDS Q7A_2434 NC_017857.1 2491563 2492633 D PFAM: Glycosyl transferases group 1; glycosyltransferase 2491563..2492633 Methylophaga nitratireducenticrescens 12846305 YP_006296880.1 CDS Q7A_2435 NC_017857.1 2492630 2493628 D PFAM: Glycosyl transferases group 1; Poly(glycerol-phosphate) alpha-glucosyltransferase 2492630..2493628 Methylophaga nitratireducenticrescens 12846306 YP_006296881.1 CDS Q7A_2436 NC_017857.1 2493625 2494527 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); ADP-heptose--lipooligosaccharide heptosyltransferase II 2493625..2494527 Methylophaga nitratireducenticrescens 12846307 YP_006296882.1 CDS Q7A_2437 NC_017857.1 2494519 2495766 R PFAM: O-Antigen ligase; O-Antigen Polymerase complement(2494519..2495766) Methylophaga nitratireducenticrescens 12846308 YP_006296883.1 CDS Q7A_2438 NC_017857.1 2495834 2496508 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(2495834..2496508) Methylophaga nitratireducenticrescens 12846309 YP_006296884.1 CDS Q7A_2439 NC_017857.1 2496505 2497131 R PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; hypothetical protein complement(2496505..2497131) Methylophaga nitratireducenticrescens 12846310 YP_006296885.1 CDS Q7A_2440 NC_017857.1 2497202 2498032 R PFAM: PHP domain; metal-dependent phosphoesterase complement(2497202..2498032) Methylophaga nitratireducenticrescens 12846311 YP_006296886.1 CDS Q7A_2441 NC_017857.1 2498085 2498678 D PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A; intracellular septation protein IspA 2498085..2498678 Methylophaga nitratireducenticrescens 12846312 YP_006296887.1 CDS Q7A_2442 NC_017857.1 2498678 2498977 D PFAM: YCII-related domain; YciL protein 2498678..2498977 Methylophaga nitratireducenticrescens 12846313 YP_006296888.1 CDS Q7A_2443 NC_017857.1 2498974 2499243 D PFAM: BolA-like protein; cell division protein BolA 2498974..2499243 Methylophaga nitratireducenticrescens 12846314 YP_006296889.1 CDS Q7A_2444 NC_017857.1 2499252 2501423 D PFAM: PilZ domain; hypothetical protein 2499252..2501423 Methylophaga nitratireducenticrescens 12846315 YP_006296890.1 CDS Q7A_2445 NC_017857.1 2501450 2502775 R PFAM: Putative modulator of DNA gyrase; TldE/PmbA protein complement(2501450..2502775) Methylophaga nitratireducenticrescens 12846316 YP_006296891.1 CDS Q7A_2446 NC_017857.1 2502772 2503131 R mov34/MPN/PAD-1 family protein complement(2502772..2503131) Methylophaga nitratireducenticrescens 12846317 YP_006296892.1 CDS Q7A_2447 NC_017857.1 2503183 2503941 R PFAM: MoeZ/MoeB domain; ThiF family; sulfur carrier protein adenylyltransferase ThiF complement(2503183..2503941) Methylophaga nitratireducenticrescens 12846318 YP_006296893.1 CDS Q7A_2448 NC_017857.1 2503953 2504801 R PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; polypeptide chain release factor methylase complement(2503953..2504801) Methylophaga nitratireducenticrescens 12846319 YP_006296894.1 CDS Q7A_2449 NC_017857.1 2504816 2505862 R PFAM: Response regulator receiver domain; response regulator complement(2504816..2505862) Methylophaga nitratireducenticrescens 12846320 YP_006296895.1 CDS Q7A_2450 NC_017857.1 2505882 2506193 R PFAM: Protein of unknown function (DUF3301); hypothetical protein complement(2505882..2506193) Methylophaga nitratireducenticrescens 12846321 YP_006296896.1 CDS Q7A_2451 NC_017857.1 2506190 2506918 R PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; ribosomal RNA small subunit methyltransferase E complement(2506190..2506918) Methylophaga nitratireducenticrescens 12846322 YP_006296897.1 CDS Q7A_2452 NC_017857.1 2506992 2507813 D PFAM: Inositol monophosphatase family; inositol-1-monophosphatase 2506992..2507813 Methylophaga nitratireducenticrescens 12846323 YP_006296898.1 CDS Q7A_2453 NC_017857.1 2507791 2508546 D PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 2507791..2508546 Methylophaga nitratireducenticrescens 12846324 YP_006296899.1 CDS Q7A_2454 NC_017857.1 2508585 2509391 D PFAM: ZIP Zinc transporter; Zinc transporter, ZIP family 2508585..2509391 Methylophaga nitratireducenticrescens 12846325 YP_006296900.1 CDS Q7A_2455 NC_017857.1 2509398 2510429 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; ADP-heptose--lipooligosaccharide heptosyltransferase II 2509398..2510429 Methylophaga nitratireducenticrescens 12846326 YP_006296901.1 CDS Q7A_2456 NC_017857.1 2510500 2511645 D PFAM: Glycosyl transferases group 1; glycosyl transferase in large core OS assembly cluster 2510500..2511645 Methylophaga nitratireducenticrescens 12846327 YP_006296902.1 CDS Q7A_2457 NC_017857.1 2511652 2512893 R PFAM: O-Antigen ligase; O-antigen polymerase family protein/toluene tolerance protein complement(2511652..2512893) Methylophaga nitratireducenticrescens 12846328 YP_006296903.1 CDS Q7A_2458 NC_017857.1 2513181 2514104 D hypothetical protein 2513181..2514104 Methylophaga nitratireducenticrescens 12846329 YP_006296904.1 CDS Q7A_2459 NC_017857.1 2514170 2515894 D PFAM: Carbamoyltransferase; Carbamoyltransferase in large core OS assembly cluster 2514170..2515894 Methylophaga nitratireducenticrescens 12846330 YP_006296905.1 CDS Q7A_2460 NC_017857.1 2515891 2516850 R PFAM: Glycosyltransferase family 9 (heptosyltransferase); ADP-heptose--LPS heptosyltransferase complement(2515891..2516850) Methylophaga nitratireducenticrescens 12846331 YP_006296906.1 CDS Q7A_2461 NC_017857.1 2516891 2518018 R PFAM: Glycosyl transferases group 1; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG complement(2516891..2518018) Methylophaga nitratireducenticrescens 12846332 YP_006296907.1 CDS Q7A_2462 NC_017857.1 2518051 2519430 R PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Serine/threonine protein kinase complement(2518051..2519430) Methylophaga nitratireducenticrescens 12846333 YP_006296908.1 CDS Q7A_2463 NC_017857.1 2519436 2520245 R PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase complement(2519436..2520245) Methylophaga nitratireducenticrescens 12846334 YP_006296909.1 CDS Q7A_2464 NC_017857.1 2520352 2520915 D PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; phosphoheptose isomerase 1 2520352..2520915 Methylophaga nitratireducenticrescens 12846335 YP_006296910.1 CDS Q7A_2465 NC_017857.1 2520912 2522111 D PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 2520912..2522111 Methylophaga nitratireducenticrescens 12846336 YP_006296911.1 CDS Q7A_2466 NC_017857.1 2522108 2522914 D PFAM: Aldo/keto reductase family; oxidoreductase 2522108..2522914 Methylophaga nitratireducenticrescens 12846337 YP_006296912.1 CDS Q7A_2467 NC_017857.1 2523242 2523532 R hypothetical protein complement(2523242..2523532) Methylophaga nitratireducenticrescens 12846338 YP_006296913.1 CDS Q7A_2468 NC_017857.1 2523525 2523746 R PFAM: Protein of unknown function (DUF3423); hypothetical protein complement(2523525..2523746) Methylophaga nitratireducenticrescens 12846339 YP_006296914.1 CDS Q7A_2469 NC_017857.1 2524003 2524191 D PFAM: Phd_YefM; prevent-host-death family protein 2524003..2524191 Methylophaga nitratireducenticrescens 12846340 YP_006296915.1 CDS Q7A_2470 NC_017857.1 2525119 2525337 D hypothetical protein 2525119..2525337 Methylophaga nitratireducenticrescens 12846341 YP_006296916.1 CDS Q7A_2471 NC_017857.1 2525363 2525869 D hypothetical protein 2525363..2525869 Methylophaga nitratireducenticrescens 12846342 YP_006296917.1 CDS Q7A_2472 NC_017857.1 2526692 2526832 R hypothetical protein complement(2526692..2526832) Methylophaga nitratireducenticrescens 12846343 YP_006296918.1 CDS Q7A_2473 NC_017857.1 2526841 2527269 D PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; ligB family enzyme 2526841..2527269 Methylophaga nitratireducenticrescens 12846344 YP_006296919.1 CDS Q7A_2474 NC_017857.1 2527285 2527602 R PFAM: CcdB protein; CcdB-like toxin protein complement(2527285..2527602) Methylophaga nitratireducenticrescens 12846345 YP_006296920.1 CDS Q7A_2475 NC_017857.1 2527602 2527847 R PFAM: Post-segregation antitoxin CcdA; acetoacetyl-CoA synthase complement(2527602..2527847) Methylophaga nitratireducenticrescens 12846346 YP_006296921.1 CDS Q7A_2476 NC_017857.1 2528036 2529481 R PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase complement(2528036..2529481) Methylophaga nitratireducenticrescens 12846347 YP_006296922.1 CDS Q7A_2477 NC_017857.1 2529512 2530549 R PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I complement(2529512..2530549) Methylophaga nitratireducenticrescens 12846348 YP_006296923.1 CDS Q7A_2478 NC_017857.1 2530578 2531534 R PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Homoserine kinase complement(2530578..2531534) Methylophaga nitratireducenticrescens 12846349 YP_006296924.1 CDS Q7A_2479 NC_017857.1 2531562 2531798 R PFAM: Protein of unknown function (DUF2782); hypothetical protein complement(2531562..2531798) Methylophaga nitratireducenticrescens 12846350 YP_006296925.1 CDS Q7A_2480 NC_017857.1 2531990 2534704 D PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I 2531990..2534704 Methylophaga nitratireducenticrescens 12846351 YP_006296926.1 CDS Q7A_2481 NC_017857.1 2535180 2537117 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(2535180..2537117) Methylophaga nitratireducenticrescens 12846352 YP_006296927.1 CDS Q7A_2482 NC_017857.1 2537173 2538246 R PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Epoxyqueuosine (oQ) reductase QueG complement(2537173..2538246) Methylophaga nitratireducenticrescens 12846353 YP_006296928.1 CDS Q7A_2483 NC_017857.1 2538293 2539783 D PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein 2538293..2539783 Methylophaga nitratireducenticrescens 12846354 YP_006296929.1 CDS Q7A_2484 NC_017857.1 2539783 2540235 D PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; ATPase YjeE 2539783..2540235 Methylophaga nitratireducenticrescens 12846355 YP_006296930.1 CDS Q7A_2485 NC_017857.1 2540336 2541721 D PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain; N-acetylmuramoyl-L-alanine amidase 2540336..2541721 Methylophaga nitratireducenticrescens 12846356 YP_006296931.1 CDS Q7A_2486 NC_017857.1 2541769 2543445 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 2541769..2543445 Methylophaga nitratireducenticrescens 12846357 YP_006296932.1 CDS Q7A_2487 NC_017857.1 2543473 2544588 D hypothetical protein 2543473..2544588 Methylophaga nitratireducenticrescens 12846358 YP_006296933.1 CDS Q7A_2488 NC_017857.1 2544628 2547750 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump complement(2544628..2547750) Methylophaga nitratireducenticrescens 12846359 YP_006296934.1 CDS Q7A_2489 NC_017857.1 2547796 2548932 R hypothetical protein complement(2547796..2548932) Methylophaga nitratireducenticrescens 12846360 YP_006296935.1 CDS Q7A_2491 NC_017857.1 2549086 2549235 R hypothetical protein complement(2549086..2549235) Methylophaga nitratireducenticrescens 12846362 YP_006296936.1 CDS Q7A_2492 NC_017857.1 2549376 2549558 R hypothetical protein complement(2549376..2549558) Methylophaga nitratireducenticrescens 12846363 YP_006296937.1 CDS Q7A_2493 NC_017857.1 2549884 2551080 D outer membrane protein (porin) 2549884..2551080 Methylophaga nitratireducenticrescens 12846364 YP_006296938.1 CDS Q7A_2494 NC_017857.1 2551263 2551898 D PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL 2551263..2551898 Methylophaga nitratireducenticrescens 12846365 YP_006296939.1 CDS Q7A_2495 NC_017857.1 2551950 2552321 R hypothetical protein complement(2551950..2552321) Methylophaga nitratireducenticrescens 12846366 YP_006296940.1 CDS Q7A_2496 NC_017857.1 2552400 2553389 R PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK complement(2552400..2553389) Methylophaga nitratireducenticrescens 12846367 YP_006296941.1 CDS Q7A_2497 NC_017857.1 2553408 2554241 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD superfamily sugar phosphatase complement(2553408..2554241) Methylophaga nitratireducenticrescens 12846368 YP_006296942.1 CDS Q7A_2498 NC_017857.1 2554447 2555088 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 2554447..2555088 Methylophaga nitratireducenticrescens 12846369 YP_006296943.1 CDS Q7A_2499 NC_017857.1 2555365 2555679 D hypothetical protein 2555365..2555679 Methylophaga nitratireducenticrescens 12846370 YP_006296944.1 CDS Q7A_2500 NC_017857.1 2555823 2556806 D PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase 2555823..2556806 Methylophaga nitratireducenticrescens 12846371 YP_006296945.1 CDS Q7A_2501 NC_017857.1 2556965 2557600 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 2556965..2557600 Methylophaga nitratireducenticrescens 12846372 YP_006296946.1 CDS Q7A_2502 NC_017857.1 2557612 2558151 D PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; 6-phospho 3-hexuloisomerase 2557612..2558151 Methylophaga nitratireducenticrescens 12846373 YP_006296947.1 CDS Q7A_2503 NC_017857.1 2558278 2559681 D PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 2558278..2559681 Methylophaga nitratireducenticrescens 12846374 YP_006296948.1 CDS Q7A_2504 NC_017857.1 2559681 2560643 D PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases; protein-N(5)-glutamine methyltransferase PrmB 2559681..2560643 Methylophaga nitratireducenticrescens 12846375 YP_006296949.1 CDS Q7A_2505 NC_017857.1 2560601 2561920 R PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2560601..2561920) Methylophaga nitratireducenticrescens 12846376 YP_006296950.1 CDS Q7A_2506 NC_017857.1 2561967 2562659 R PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH; DNA mismatch repair endonuclease MutH complement(2561967..2562659) Methylophaga nitratireducenticrescens 12846377 YP_006296951.1 CDS Q7A_2507 NC_017857.1 2562708 2563631 D PFAM: ABC transporter; ATP-binding component of ABC transport system 2562708..2563631 Methylophaga nitratireducenticrescens 12846378 YP_006296952.1 CDS Q7A_2508 NC_017857.1 2563628 2564407 D PFAM: ABC-2 type transporter; multidrug ABC transporter permease 2563628..2564407 Methylophaga nitratireducenticrescens 12846379 YP_006296953.1 CDS Q7A_2509 NC_017857.1 2564721 2565704 R PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A; tRNA dihydrouridine synthase A complement(2564721..2565704) Methylophaga nitratireducenticrescens 12846380 YP_006296954.1 CDS Q7A_2510 NC_017857.1 2565878 2566480 D PFAM: Protein of unknown function DUF45; metal-dependent hydrolase 2565878..2566480 Methylophaga nitratireducenticrescens 12846381 YP_006296955.1 CDS Q7A_2511 NC_017857.1 2566701 2567864 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 2566701..2567864 Methylophaga nitratireducenticrescens 12846382 YP_006296956.1 CDS Q7A_2512 NC_017857.1 2567879 2569189 D PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase 2567879..2569189 Methylophaga nitratireducenticrescens 12846383 YP_006296957.1 CDS Q7A_2513 NC_017857.1 2569248 2570099 D PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 2569248..2570099 Methylophaga nitratireducenticrescens 12846467 YP_006296958.1 CDS Q7A_2514 NC_017857.1 2570104 2570811 D PFAM: Binding-protein-dependent transport system inner membrane component; tungstate ABC transporter permease 2570104..2570811 Methylophaga nitratireducenticrescens 12846468 YP_006296959.1 CDS Q7A_2515 NC_017857.1 2570808 2571797 D PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; ABC-type tungstate transport system, ATP-binding protein 2570808..2571797 Methylophaga nitratireducenticrescens 12846469 YP_006296960.1 CDS Q7A_2516 NC_017857.1 2571926 2573338 D PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor RpoN 2571926..2573338 Methylophaga nitratireducenticrescens 12846470 YP_006296961.1 CDS Q7A_2517 NC_017857.1 2573374 2573700 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosome hibernation protein YhbH 2573374..2573700 Methylophaga nitratireducenticrescens 12846471 YP_006296962.1 CDS Q7A_2518 NC_017857.1 2573716 2574177 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 2573716..2574177 Methylophaga nitratireducenticrescens 12846472 YP_006296963.1 CDS Q7A_2519 NC_017857.1 2574184 2574696 D PFAM: HPr Serine kinase C-terminal domain; HPr kinase/phosphorylase 2574184..2574696 Methylophaga nitratireducenticrescens 12846473 YP_006296964.1 CDS Q7A_2520 NC_017857.1 2574881 2575213 D PFAM: PTS system fructose IIA component; PTS system fructose subfamily transporter subunit IIA 2574881..2575213 Methylophaga nitratireducenticrescens 12846474 YP_006296965.1 CDS Q7A_2521 NC_017857.1 2575210 2575482 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphocarrier protein 2575210..2575482 Methylophaga nitratireducenticrescens 12846475 YP_006296966.1 CDS Q7A_2522 NC_017857.1 2575479 2577230 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system phosphoenolpyruvate-protein phosphotransferase 2575479..2577230 Methylophaga nitratireducenticrescens 12846476 YP_006296967.1 CDS Q7A_2523 NC_017857.1 2577369 2578253 D PFAM: Transposase DDE domain; transposase, IS982 family 2577369..2578253 Methylophaga nitratireducenticrescens 12846477 YP_006296968.1 CDS Q7A_2524 NC_017857.1 2578354 2579712 D PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 2578354..2579712 Methylophaga nitratireducenticrescens 12846478 YP_006296969.1 CDS Q7A_2525 NC_017857.1 2579728 2580825 D PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 2579728..2580825 Methylophaga nitratireducenticrescens 12846479 YP_006296970.1 CDS Q7A_2526 NC_017857.1 2580837 2581994 D PFAM: Major Facilitator Superfamily; Nucleoside:H+ symporter:Major facilitator superfamily 2580837..2581994 Methylophaga nitratireducenticrescens 12846480 YP_006296971.1 CDS Q7A_2527 NC_017857.1 2582113 2583462 D PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A 2582113..2583462 Methylophaga nitratireducenticrescens 12846481 YP_006296972.1 CDS Q7A_2528 NC_017857.1 2583465 2584673 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; Na(+)-translocating NADH-quinone reductase subunit B 2583465..2584673 Methylophaga nitratireducenticrescens 12846482 YP_006296973.1 CDS Q7A_2529 NC_017857.1 2584676 2585503 D PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; Na(+)-translocating NADH-quinone reductase subunit C 2584676..2585503 Methylophaga nitratireducenticrescens 12846483 YP_006296974.1 CDS Q7A_2530 NC_017857.1 2585503 2586165 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit D 2585503..2586165 Methylophaga nitratireducenticrescens 12846484 YP_006296975.1 CDS Q7A_2531 NC_017857.1 2586166 2586774 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; Na(+)-translocating NADH-quinone reductase subunit E 2586166..2586774 Methylophaga nitratireducenticrescens 12846485 YP_006296976.1 CDS Q7A_2532 NC_017857.1 2586774 2587991 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; Na(+)-translocating NADH-quinone reductase subunit F 2586774..2587991 Methylophaga nitratireducenticrescens 12846486 YP_006296977.1 CDS Q7A_2533 NC_017857.1 2587993 2588196 D PFAM: Protein of unknown function (DUF539); hypothetical protein 2587993..2588196 Methylophaga nitratireducenticrescens 12846487 YP_006296978.1 CDS Q7A_2534 NC_017857.1 2588217 2588681 D PFAM: CBS domain; transcriptional regulator 2588217..2588681 Methylophaga nitratireducenticrescens 12846488 YP_006296979.1 CDS Q7A_2535 NC_017857.1 2588821 2589777 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 2588821..2589777 Methylophaga nitratireducenticrescens 12846489 YP_006296980.1 CDS Q7A_2536 NC_017857.1 2589842 2590765 D PFAM: PAS fold; TIGRFAM: PAS domain S-box; sensory box histidine kinase 2589842..2590765 Methylophaga nitratireducenticrescens 12846490 YP_006296981.1 CDS Q7A_2537 NC_017857.1 2590900 2591304 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2590900..2591304 Methylophaga nitratireducenticrescens 12846491 YP_006296982.1 CDS Q7A_2538 NC_017857.1 2591764 2591901 R hypothetical protein complement(2591764..2591901) Methylophaga nitratireducenticrescens 12846492 YP_006296983.1 CDS Q7A_2543 NC_017857.1 2595864 2595986 R hypothetical protein complement(2595864..2595986) Methylophaga nitratireducenticrescens 12846497 YP_006296984.1 CDS Q7A_2546 NC_017857.1 2598292 2599167 R AraC family transcriptional regulator complement(2598292..2599167) Methylophaga nitratireducenticrescens 12846500 YP_006296985.1 CDS Q7A_2547 NC_017857.1 2599273 2599746 D hypothetical protein 2599273..2599746 Methylophaga nitratireducenticrescens 12846501 YP_006296986.1 CDS Q7A_2548 NC_017857.1 2599809 2601008 R PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) complement(2599809..2601008) Methylophaga nitratireducenticrescens 12846502 YP_006296987.1 CDS Q7A_2549 NC_017857.1 2601131 2602723 D PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23; peptidase 2601131..2602723 Methylophaga nitratireducenticrescens 12846503 YP_006296988.1 CDS Q7A_2550 NC_017857.1 2602735 2603862 D PFAM: Uncharacterised protein family (UPF0075); anhydro-N-acetylmuramic acid kinase 2602735..2603862 Methylophaga nitratireducenticrescens 12846504 YP_006296989.1 CDS Q7A_2551 NC_017857.1 2603838 2604227 R PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; glycine cleavage system H protein complement(2603838..2604227) Methylophaga nitratireducenticrescens 12846505 YP_006296990.1 CDS Q7A_2552 NC_017857.1 2604220 2605677 R PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(2604220..2605677) Methylophaga nitratireducenticrescens 12846506 YP_006296991.1 CDS Q7A_2553 NC_017857.1 2605681 2607363 R PFAM: Glycosyl hydrolase family 57; amylopullulanase complement(2605681..2607363) Methylophaga nitratireducenticrescens 12846507 YP_006296992.1 CDS Q7A_2554 NC_017857.1 2607353 2608621 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase complement(2607353..2608621) Methylophaga nitratireducenticrescens 12846508 YP_006296993.1 CDS Q7A_2555 NC_017857.1 2608890 2610899 D PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; 1,4-alpha-glucan (glycogen) branching enzyme 2608890..2610899 Methylophaga nitratireducenticrescens 12846509 YP_006296994.1 CDS Q7A_2556 NC_017857.1 2610951 2612588 R PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase complement(2610951..2612588) Methylophaga nitratireducenticrescens 12846510 YP_006296995.1 CDS Q7A_2557 NC_017857.1 2612613 2613881 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(2612613..2613881) Methylophaga nitratireducenticrescens 12846511 YP_006296996.1 CDS Q7A_2558 NC_017857.1 2613884 2614444 R PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(2613884..2614444) Methylophaga nitratireducenticrescens 12846512 YP_006296997.1 CDS Q7A_2559 NC_017857.1 2614531 2615001 R PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(2614531..2615001) Methylophaga nitratireducenticrescens 12846513 YP_006296998.1 CDS Q7A_2560 NC_017857.1 2615001 2615684 R hypothetical protein complement(2615001..2615684) Methylophaga nitratireducenticrescens 12846514 YP_006296999.1 CDS Q7A_2561 NC_017857.1 2615807 2615926 R hypothetical protein complement(2615807..2615926) Methylophaga nitratireducenticrescens 12846515 YP_006297000.1 CDS Q7A_2562 NC_017857.1 2615932 2616687 R PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW; type IV pilus biogenesis protein PilF complement(2615932..2616687) Methylophaga nitratireducenticrescens 12846516 YP_006297001.1 CDS Q7A_2563 NC_017857.1 2616684 2617790 R PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; ribosomal RNA large subunit methyltransferase N complement(2616684..2617790) Methylophaga nitratireducenticrescens 12846517 YP_006297002.1 CDS Q7A_2564 NC_017857.1 2617801 2618232 R PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase complement(2617801..2618232) Methylophaga nitratireducenticrescens 12846518 YP_006297003.1 CDS Q7A_2565 NC_017857.1 2618312 2618443 R hypothetical protein complement(2618312..2618443) Methylophaga nitratireducenticrescens 12846519 YP_006297004.1 CDS Q7A_2566 NC_017857.1 2618400 2619272 D PFAM: ATP-NAD kinase; NAD kinase 2618400..2619272 Methylophaga nitratireducenticrescens 12846520 YP_006297005.1 CDS Q7A_2567 NC_017857.1 2619266 2620939 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 2619266..2620939 Methylophaga nitratireducenticrescens 12846521 YP_006297006.1 CDS Q7A_2568 NC_017857.1 2620946 2621362 R PFAM: Ferric uptake regulator family; Ferric uptake regulation protein FUR complement(2620946..2621362) Methylophaga nitratireducenticrescens 12846522 YP_006297007.1 CDS Q7A_2569 NC_017857.1 2621440 2622018 D PFAM: SmpA / OmlA family; outer membrane lipoprotein SmpA 2621440..2622018 Methylophaga nitratireducenticrescens 12846523 YP_006297008.1 CDS Q7A_2570 NC_017857.1 2622037 2622663 R PFAM: Carbonic anhydrase; carbonic anhydrase complement(2622037..2622663) Methylophaga nitratireducenticrescens 12846524 YP_006297009.1 CDS Q7A_2571 NC_017857.1 2622667 2623308 R PFAM: Metallo-beta-lactamase superfamily; hydroxyacylglutathione hydrolase complement(2622667..2623308) Methylophaga nitratireducenticrescens 12846525 YP_006297010.1 CDS Q7A_2572 NC_017857.1 2623382 2624509 R hypothetical protein complement(2623382..2624509) Methylophaga nitratireducenticrescens 12846526 YP_006297011.1 CDS Q7A_2573 NC_017857.1 2624714 2625130 R hypothetical protein complement(2624714..2625130) Methylophaga nitratireducenticrescens 12846527 YP_006297012.1 CDS Q7A_2574 NC_017857.1 2625203 2627596 R PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La Type II complement(2625203..2627596) Methylophaga nitratireducenticrescens 12846528 YP_006297013.1 CDS Q7A_2575 NC_017857.1 2627679 2627984 D PFAM: PilZ domain; hypothetical protein 2627679..2627984 Methylophaga nitratireducenticrescens 12846529 YP_006297014.1 CDS Q7A_2576 NC_017857.1 2627992 2628636 R PFAM: Ubiquinone biosynthesis protein COQ7; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(2627992..2628636) Methylophaga nitratireducenticrescens 12846530 YP_006297015.1 CDS Q7A_2577 NC_017857.1 2628655 2629725 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2628655..2629725) Methylophaga nitratireducenticrescens 12846531 YP_006297016.1 CDS Q7A_2578 NC_017857.1 2629811 2630764 R PFAM: CheW-like domain; Response regulator receiver domain; chemotaxis protein CheV complement(2629811..2630764) Methylophaga nitratireducenticrescens 12846532 YP_006297017.1 CDS Q7A_2580 NC_017857.1 2631100 2633268 D PFAM: Ribonuclease B OB domain; RNB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; 3'-to-5' exoribonuclease RNase R 2631100..2633268 Methylophaga nitratireducenticrescens 12846534 YP_006297018.1 CDS Q7A_2583 NC_017857.1 2633903 2635483 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; Aerotaxis sensor receptor protein complement(2633903..2635483) Methylophaga nitratireducenticrescens 12846537 YP_006297019.1 CDS Q7A_2584 NC_017857.1 2635950 2637302 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; NADP-specific glutamate dehydrogenase 2635950..2637302 Methylophaga nitratireducenticrescens 12846538 YP_006297020.1 CDS Q7A_2585 NC_017857.1 2637449 2637664 R ISSod6 transposase, IS1301 complement(2637449..2637664) Methylophaga nitratireducenticrescens 12846539 YP_006297021.1 CDS Q7A_2586 NC_017857.1 2637703 2637834 R hypothetical protein complement(2637703..2637834) Methylophaga nitratireducenticrescens 12846540 YP_006297022.1 CDS Q7A_2587 NC_017857.1 2637861 2639612 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; glucose dehydrogenase, PQQ-dependent complement(2637861..2639612) Methylophaga nitratireducenticrescens 12846541 YP_006297023.1 CDS Q7A_2588 NC_017857.1 2639917 2640519 R PFAM: Isochorismatase family; isochorismatase complement(2639917..2640519) Methylophaga nitratireducenticrescens 12846542 YP_006297024.1 CDS Q7A_2589 NC_017857.1 2640935 2641933 R PFAM: Catalase; catalase complement(2640935..2641933) Methylophaga nitratireducenticrescens 12846543 YP_006297025.1 CDS Q7A_2590 NC_017857.1 2642022 2642729 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2642022..2642729 Methylophaga nitratireducenticrescens 12846544 YP_006297026.1 CDS Q7A_2591 NC_017857.1 2642753 2643742 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; quinone oxidoreductase 2642753..2643742 Methylophaga nitratireducenticrescens 12846545 YP_006297027.1 CDS Q7A_2592 NC_017857.1 2643776 2645716 D PFAM: SMP-30/Gluconolaconase/LRE-like region; Glucose / Sorbosone dehydrogenase; L-sorbosone dehydrogenase 2643776..2645716 Methylophaga nitratireducenticrescens 12846547 YP_006297028.1 CDS Q7A_2593 NC_017857.1 2646260 2646388 R hypothetical protein complement(2646260..2646388) Methylophaga nitratireducenticrescens 12846548 YP_006297029.1 CDS Q7A_2594 NC_017857.1 2646917 2647240 R hypothetical protein complement(2646917..2647240) Methylophaga nitratireducenticrescens 12846632 YP_006297030.1 CDS Q7A_2595 NC_017857.1 2647298 2647531 R hypothetical protein complement(2647298..2647531) Methylophaga nitratireducenticrescens 12846633 YP_006297031.1 CDS Q7A_2596 NC_017857.1 2647595 2647711 R hypothetical protein complement(2647595..2647711) Methylophaga nitratireducenticrescens 12846634 YP_006297032.1 CDS Q7A_2597 NC_017857.1 2647712 2647849 R hypothetical protein complement(2647712..2647849) Methylophaga nitratireducenticrescens 12846635 YP_006297033.1 CDS Q7A_2598 NC_017857.1 2647997 2648266 R hypothetical protein complement(2647997..2648266) Methylophaga nitratireducenticrescens 12846636 YP_006297034.1 CDS Q7A_2599 NC_017857.1 2648601 2648729 R hypothetical protein complement(2648601..2648729) Methylophaga nitratireducenticrescens 12846637 YP_006297035.1 CDS Q7A_2600 NC_017857.1 2649258 2649470 R hypothetical protein complement(2649258..2649470) Methylophaga nitratireducenticrescens 12846638 YP_006297036.1 CDS Q7A_2601 NC_017857.1 2649564 2649860 R hypothetical protein complement(2649564..2649860) Methylophaga nitratireducenticrescens 12846639 YP_006297037.1 CDS Q7A_2602 NC_017857.1 2649981 2650289 R hypothetical protein complement(2649981..2650289) Methylophaga nitratireducenticrescens 12846640 YP_006297038.1 CDS Q7A_2603 NC_017857.1 2650373 2650909 R hypothetical protein complement(2650373..2650909) Methylophaga nitratireducenticrescens 12846641 YP_006297039.1 CDS Q7A_2604 NC_017857.1 2651002 2651493 D hypothetical protein 2651002..2651493 Methylophaga nitratireducenticrescens 12846642 YP_006297040.1 CDS Q7A_2605 NC_017857.1 2651546 2651683 R hypothetical protein complement(2651546..2651683) Methylophaga nitratireducenticrescens 12846643 YP_006297041.1 CDS Q7A_2606 NC_017857.1 2651798 2651977 R hypothetical protein complement(2651798..2651977) Methylophaga nitratireducenticrescens 12846644 YP_006297042.1 CDS Q7A_2607 NC_017857.1 2652041 2652217 R hypothetical protein complement(2652041..2652217) Methylophaga nitratireducenticrescens 12846645 YP_006297043.1 CDS Q7A_2608 NC_017857.1 2652226 2652348 D hypothetical protein 2652226..2652348 Methylophaga nitratireducenticrescens 12846646 YP_006297044.1 CDS Q7A_2609 NC_017857.1 2652718 2653269 R PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST complement(2652718..2653269) Methylophaga nitratireducenticrescens 12846647 YP_006297045.1 CDS Q7A_2610 NC_017857.1 2653281 2653931 R hypothetical protein complement(2653281..2653931) Methylophaga nitratireducenticrescens 12846648 YP_006297046.1 CDS Q7A_2611 NC_017857.1 2654317 2655261 R hypothetical protein complement(2654317..2655261) Methylophaga nitratireducenticrescens 12846649 YP_006297047.1 CDS Q7A_2612 NC_017857.1 2655286 2658261 R PFAM: Type III restriction enzyme, res subunit; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated endonuclease Cas3-HD complement(2655286..2658261) Methylophaga nitratireducenticrescens 12846650 YP_006297048.1 CDS Q7A_2613 NC_017857.1 2658258 2659217 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein Cas1 complement(2658258..2659217) Methylophaga nitratireducenticrescens 12846651 YP_006297049.1 CDS Q7A_2614 NC_017857.1 2659283 2660245 R transcriptional regulator complement(2659283..2660245) Methylophaga nitratireducenticrescens 12846652 YP_006297050.1 CDS Q7A_2615 NC_017857.1 2660351 2662063 R PFAM: Protein kinase domain; Protein phosphatase 2C; Serine/threonine protein kinase complement(2660351..2662063) Methylophaga nitratireducenticrescens 12846653 YP_006297051.1 CDS Q7A_2616 NC_017857.1 2662078 2663478 R PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter complement(2662078..2663478) Methylophaga nitratireducenticrescens 12846654 YP_006297052.1 CDS Q7A_2617 NC_017857.1 2663702 2663863 D hypothetical protein 2663702..2663863 Methylophaga nitratireducenticrescens 12846655 YP_006297053.1 CDS Q7A_2618 NC_017857.1 2663996 2665228 R PFAM: EAL domain; EAL-domain associated signalling protein domain; hypothetical protein complement(2663996..2665228) Methylophaga nitratireducenticrescens 12846656 YP_006297054.1 CDS Q7A_2619 NC_017857.1 2665624 2668275 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Assimilatory nitrate reductase large subunit complement(2665624..2668275) Methylophaga nitratireducenticrescens 12846657 YP_006297055.1 CDS Q7A_2620 NC_017857.1 2668286 2668594 R PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit complement(2668286..2668594) Methylophaga nitratireducenticrescens 12846658 YP_006297056.1 CDS Q7A_2621 NC_017857.1 2668600 2671029 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit complement(2668600..2671029) Methylophaga nitratireducenticrescens 12846659 YP_006297057.1 CDS Q7A_2622 NC_017857.1 2671228 2672667 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2671228..2672667) Methylophaga nitratireducenticrescens 12846660 YP_006297058.1 CDS Q7A_2623 NC_017857.1 2672777 2674870 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2672777..2674870) Methylophaga nitratireducenticrescens 12846661 YP_006297059.1 CDS Q7A_2624 NC_017857.1 2675015 2675467 R PFAM: Nuclear transport factor 2 (NTF2) domain; TIGRFAM: conserved hypothetical protein; Ketosteroid isomerase-like protein complement(2675015..2675467) Methylophaga nitratireducenticrescens 12846662 YP_006297060.1 CDS Q7A_2625 NC_017857.1 2675491 2676015 R PFAM: MarR family; marR family transcriptional regulator complement(2675491..2676015) Methylophaga nitratireducenticrescens 12846663 YP_006297061.1 CDS Q7A_2626 NC_017857.1 2676210 2678054 D PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2676210..2678054 Methylophaga nitratireducenticrescens 12846664 YP_006297062.1 CDS Q7A_2627 NC_017857.1 2678094 2679503 D PFAM: YcjX-like family, DUF463; hypothetical protein 2678094..2679503 Methylophaga nitratireducenticrescens 12846665 YP_006297063.1 CDS Q7A_2628 NC_017857.1 2679503 2680558 D PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein; hypothetical protein 2679503..2680558 Methylophaga nitratireducenticrescens 12846666 YP_006297064.1 CDS Q7A_2629 NC_017857.1 2680564 2683383 R PFAM: GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; hypothetical protein complement(2680564..2683383) Methylophaga nitratireducenticrescens 12846667 YP_006297065.1 CDS Q7A_2630 NC_017857.1 2683610 2683987 D hypothetical protein 2683610..2683987 Methylophaga nitratireducenticrescens 12846668 YP_006297066.1 CDS Q7A_2631 NC_017857.1 2684002 2684997 D PFAM: Peptidase C39 family; bacteriocin/lantibiotic ABC transporter 2684002..2684997 Methylophaga nitratireducenticrescens 12846669 YP_006297067.1 CDS Q7A_2632 NC_017857.1 2685199 2685969 D PFAM: EAL domain; hypothetical protein 2685199..2685969 Methylophaga nitratireducenticrescens 12846670 YP_006297068.1 CDS Q7A_2633 NC_017857.1 2686024 2686473 R PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin; Azurin complement(2686024..2686473) Methylophaga nitratireducenticrescens 12846671 YP_006297069.1 CDS Q7A_2634 NC_017857.1 2686851 2687840 R hypothetical protein complement(2686851..2687840) Methylophaga nitratireducenticrescens 12846672 YP_006297070.1 CDS Q7A_2635 NC_017857.1 2687910 2688071 R hypothetical protein complement(2687910..2688071) Methylophaga nitratireducenticrescens 12846673 YP_006297071.1 CDS Q7A_2636 NC_017857.1 2688071 2688697 R hypothetical protein complement(2688071..2688697) Methylophaga nitratireducenticrescens 12846674 YP_006297072.1 CDS Q7A_2637 NC_017857.1 2688808 2689005 R transposase, IS982 family complement(2688808..2689005) Methylophaga nitratireducenticrescens 12846675 YP_006297073.1 CDS Q7A_2640 NC_017857.1 2689633 2690190 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2689633..2690190) Methylophaga nitratireducenticrescens 12846678 YP_006297074.1 CDS Q7A_2641 NC_017857.1 2690244 2692085 R PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C complement(2690244..2692085) Methylophaga nitratireducenticrescens 12846679 YP_006297075.1 CDS Q7A_2642 NC_017857.1 2692098 2692307 R hypothetical protein complement(2692098..2692307) Methylophaga nitratireducenticrescens 12846680 YP_006297076.1 CDS Q7A_2643 NC_017857.1 2692388 2695918 D PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 2692388..2695918 Methylophaga nitratireducenticrescens 12846681 YP_006297077.1 CDS Q7A_2644 NC_017857.1 2695918 2696685 D PFAM: Methyltransferase domain; S-adenosylmethionine-dependent methyltransferase 2695918..2696685 Methylophaga nitratireducenticrescens 12846682 YP_006297078.1 CDS Q7A_2645 NC_017857.1 2696775 2697644 D PFAM: Protein of unknown function (DUF785); hypothetical protein 2696775..2697644 Methylophaga nitratireducenticrescens 12846683 YP_006297079.1 CDS Q7A_2646 NC_017857.1 2697654 2699165 D hypothetical protein 2697654..2699165 Methylophaga nitratireducenticrescens 12846684 YP_006297080.1 CDS Q7A_2647 NC_017857.1 2699162 2700163 D TIGRFAM: alpha-L-glutamate ligase-related protein; alpha-L-glutamate ligase 2699162..2700163 Methylophaga nitratireducenticrescens 12846685 YP_006297081.1 CDS Q7A_2648 NC_017857.1 2700183 2700902 D PFAM: Protein of unknown function (DUF541); hypothetical protein 2700183..2700902 Methylophaga nitratireducenticrescens 12846687 YP_006297082.1 CDS Q7A_2649 NC_017857.1 2700902 2701960 D PFAM: Radical SAM superfamily; hypothetical protein 2700902..2701960 Methylophaga nitratireducenticrescens 12846689 YP_006297083.1 CDS Q7A_2650 NC_017857.1 2701984 2703000 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; Myo-inositol 2-dehydrogenase complement(2701984..2703000) Methylophaga nitratireducenticrescens 12846690 YP_006297084.1 CDS Q7A_2651 NC_017857.1 2703149 2703661 D PFAM: Redoxin; peroxiredoxin 2703149..2703661 Methylophaga nitratireducenticrescens 12846691 YP_006297085.1 CDS Q7A_2652 NC_017857.1 2703716 2704417 R PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A complement(2703716..2704417) Methylophaga nitratireducenticrescens 12846692 YP_006297086.1 CDS Q7A_2653 NC_017857.1 2704503 2705390 D PFAM: Fructosamine kinase; ribulosamine/erythrulosamine 3-kinase 2704503..2705390 Methylophaga nitratireducenticrescens 12846693 YP_006297087.1 CDS Q7A_2654 NC_017857.1 2705397 2705882 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; Low molecular weight protein tyrosine phosphatase 2705397..2705882 Methylophaga nitratireducenticrescens 12846694 YP_006297088.1 CDS Q7A_2655 NC_017857.1 2706015 2707487 D PFAM: Citrate transporter; Na+/H+ antiporter NhaD type 2706015..2707487 Methylophaga nitratireducenticrescens 12846695 YP_006297089.1 CDS Q7A_2656 NC_017857.1 2707563 2708630 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 2707563..2708630 Methylophaga nitratireducenticrescens 12846696 YP_006297090.1 CDS Q7A_2657 NC_017857.1 2708880 2709461 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; electron transport complex protein RnfA 2708880..2709461 Methylophaga nitratireducenticrescens 12846697 YP_006297091.1 CDS Q7A_2658 NC_017857.1 2709465 2710025 D PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; electron transport complex protein RnfB 2709465..2710025 Methylophaga nitratireducenticrescens 12846698 YP_006297092.1 CDS Q7A_2659 NC_017857.1 2710022 2711548 D PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; electron transport complex protein RnfC 2710022..2711548 Methylophaga nitratireducenticrescens 12846699 YP_006297093.1 CDS Q7A_2660 NC_017857.1 2711548 2712579 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; electron transport complex protein RnfD 2711548..2712579 Methylophaga nitratireducenticrescens 12846700 YP_006297094.1 CDS Q7A_2661 NC_017857.1 2712576 2713214 D PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; electron transport complex protein RnfG 2712576..2713214 Methylophaga nitratireducenticrescens 12846701 YP_006297095.1 CDS Q7A_2662 NC_017857.1 2713211 2713900 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; electron transport complex protein RnfE 2713211..2713900 Methylophaga nitratireducenticrescens 12846702 YP_006297096.1 CDS Q7A_2663 NC_017857.1 2713903 2714553 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease III 2713903..2714553 Methylophaga nitratireducenticrescens 12846703 YP_006297097.1 CDS Q7A_2664 NC_017857.1 2714553 2714987 D PFAM: Domain of unknown function (DUF1841); hypothetical protein 2714553..2714987 Methylophaga nitratireducenticrescens 12846704 YP_006297098.1 CDS Q7A_2665 NC_017857.1 2714990 2715994 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; arginate lyase-like protein 2714990..2715994 Methylophaga nitratireducenticrescens 12846705 YP_006297099.1 CDS Q7A_2666 NC_017857.1 2716053 2716547 D cytochrome c family protein 2716053..2716547 Methylophaga nitratireducenticrescens 12846706 YP_006297100.1 CDS Q7A_2667 NC_017857.1 2716694 2719513 D PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B 2716694..2719513 Methylophaga nitratireducenticrescens 12846707 YP_006297101.1 CDS Q7A_2668 NC_017857.1 2719513 2719905 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Na(+) H(+) antiporter subunit C 2719513..2719905 Methylophaga nitratireducenticrescens 12846708 YP_006297102.1 CDS Q7A_2669 NC_017857.1 2719902 2721428 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Na(+) H(+) antiporter subunit D 2719902..2721428 Methylophaga nitratireducenticrescens 12846709 YP_006297103.1 CDS Q7A_2670 NC_017857.1 2721425 2721922 D PFAM: Na+/H+ ion antiporter subunit; Na(+) H(+) antiporter subunit E 2721425..2721922 Methylophaga nitratireducenticrescens 12846710 YP_006297104.1 CDS Q7A_2671 NC_017857.1 2721916 2722185 D PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); Na(+) H(+) antiporter subunit F 2721916..2722185 Methylophaga nitratireducenticrescens 12846711 YP_006297105.1 CDS Q7A_2672 NC_017857.1 2722194 2722511 D PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; Na(+) H(+) antiporter subunit G 2722194..2722511 Methylophaga nitratireducenticrescens 12846712 YP_006297106.1 CDS Q7A_2673 NC_017857.1 2722513 2722986 D PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 2722513..2722986 Methylophaga nitratireducenticrescens 12846713 YP_006297107.1 CDS Q7A_2674 NC_017857.1 2723070 2724392 R hypothetical protein complement(2723070..2724392) Methylophaga nitratireducenticrescens 12845074 YP_006297108.1 CDS Q7A_2675 NC_017857.1 2724529 2724642 R hypothetical protein complement(2724529..2724642) Methylophaga nitratireducenticrescens 12845075 YP_006297109.1 CDS Q7A_2676 NC_017857.1 2725042 2725161 D hypothetical protein 2725042..2725161 Methylophaga nitratireducenticrescens 12845076 YP_006297110.1 CDS Q7A_2677 NC_017857.1 2725419 2726702 D PFAM: Major Facilitator Superfamily; transmembrane transport protein-permease 2725419..2726702 Methylophaga nitratireducenticrescens 12845077 YP_006297111.1 CDS Q7A_2678 NC_017857.1 2726807 2727070 D PFAM: Transposase; transposase 2726807..2727070 Methylophaga nitratireducenticrescens 12845078 YP_006297112.1 CDS Q7A_2679 NC_017857.1 2727199 2727882 D PFAM: Integrase core domain; ISDet2, transposase orfB 2727199..2727882 Methylophaga nitratireducenticrescens 12845079 YP_006297113.1 CDS Q7A_2680 NC_017857.1 2728006 2728188 R hypothetical protein complement(2728006..2728188) Methylophaga nitratireducenticrescens 12845080 YP_006297114.1 CDS Q7A_2681 NC_017857.1 2728552 2729400 R hypothetical protein complement(2728552..2729400) Methylophaga nitratireducenticrescens 12845081 YP_006297115.1 CDS Q7A_2682 NC_017857.1 2729621 2730454 R PFAM: Protein of unknown function (DUF3307); hypothetical protein complement(2729621..2730454) Methylophaga nitratireducenticrescens 12845082 YP_006297116.1 CDS Q7A_2683 NC_017857.1 2730447 2731085 R hypothetical protein complement(2730447..2731085) Methylophaga nitratireducenticrescens 12845083 YP_006297117.1 CDS Q7A_2684 NC_017857.1 2731547 2731738 R hypothetical protein complement(2731547..2731738) Methylophaga nitratireducenticrescens 12845084 YP_006297118.1 CDS Q7A_2685 NC_017857.1 2731819 2732169 R PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein complement(2731819..2732169) Methylophaga nitratireducenticrescens 12845085 YP_006297119.1 CDS Q7A_2686 NC_017857.1 2732260 2732808 R hypothetical protein complement(2732260..2732808) Methylophaga nitratireducenticrescens 12845086 YP_006297120.1 CDS Q7A_2687 NC_017857.1 2732941 2733273 R PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein complement(2732941..2733273) Methylophaga nitratireducenticrescens 12845087 YP_006297121.1 CDS Q7A_2688 NC_017857.1 2734605 2735411 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(2734605..2735411) Methylophaga nitratireducenticrescens 12845088 YP_006297122.1 CDS Q7A_2689 NC_017857.1 2735829 2737190 R PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; metallo-beta-lactamase-like protein complement(2735829..2737190) Methylophaga nitratireducenticrescens 12845089 YP_006297123.1 CDS Q7A_2690 NC_017857.1 2737590 2738063 R hypothetical protein complement(2737590..2738063) Methylophaga nitratireducenticrescens 12845090 YP_006297124.1 CDS Q7A_2691 NC_017857.1 2738279 2738404 D hypothetical protein 2738279..2738404 Methylophaga nitratireducenticrescens 12845091 YP_006297125.1 CDS Q7A_2692 NC_017857.1 2738713 2738931 D hypothetical protein 2738713..2738931 Methylophaga nitratireducenticrescens 12845092 YP_006297126.1 CDS Q7A_2693 NC_017857.1 2739013 2739864 R PFAM: Domain of unkown function (DUF1775); Nuclear export factor GLE1 complement(2739013..2739864) Methylophaga nitratireducenticrescens 12845093 YP_006297127.1 CDS Q7A_2694 NC_017857.1 2739908 2741920 R PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep complement(2739908..2741920) Methylophaga nitratireducenticrescens 12845094 YP_006297128.1 CDS Q7A_2695 NC_017857.1 2741927 2743429 R PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; ComM-like protein complement(2741927..2743429) Methylophaga nitratireducenticrescens 12845095 YP_006297129.1 CDS Q7A_2696 NC_017857.1 2743507 2743626 R hypothetical protein complement(2743507..2743626) Methylophaga nitratireducenticrescens 12845096 YP_006297130.1 CDS Q7A_2697 NC_017857.1 2743811 2744077 R hypothetical protein complement(2743811..2744077) Methylophaga nitratireducenticrescens 12845097 YP_006297131.1 CDS Q7A_2698 NC_017857.1 2744198 2745073 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2744198..2745073 Methylophaga nitratireducenticrescens 12845098 YP_006297132.1 CDS Q7A_2699 NC_017857.1 2745076 2746776 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein I (serine chemoreceptor protein) complement(2745076..2746776) Methylophaga nitratireducenticrescens 12845099 YP_006297133.1 CDS Q7A_2700 NC_017857.1 2746953 2747132 D hypothetical protein 2746953..2747132 Methylophaga nitratireducenticrescens 12845100 YP_006297134.1 CDS Q7A_2701 NC_017857.1 2747153 2747467 D PFAM: Protein of unknown function, DUF481; hypothetical protein 2747153..2747467 Methylophaga nitratireducenticrescens 12845101 YP_006297135.1 CDS Q7A_2702 NC_017857.1 2747452 2748348 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR-family transcriptional regulator PtxE complement(2747452..2748348) Methylophaga nitratireducenticrescens 12845102 YP_006297136.1 CDS Q7A_2703 NC_017857.1 2748336 2749352 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase /hydroxypyruvate reductase complement(2748336..2749352) Methylophaga nitratireducenticrescens 12845103 YP_006297137.1 CDS Q7A_2704 NC_017857.1 2749362 2750168 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE; phosphonate ABC transporter permease protein phnE complement(2749362..2750168) Methylophaga nitratireducenticrescens 12845104 YP_006297138.1 CDS Q7A_2707 NC_017857.1 2751040 2751939 R PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein; phosphonate ABC transporter ATP-binding protein complement(2751040..2751939) Methylophaga nitratireducenticrescens 12845106 YP_006297139.1 CDS Q7A_2708 NC_017857.1 2752090 2752404 R PFAM: Protein of unknown function (DUF1255); hypothetical protein complement(2752090..2752404) Methylophaga nitratireducenticrescens 12845107 YP_006297140.1 CDS Q7A_2709 NC_017857.1 2752465 2752713 R PFAM: Protein of unknown function (DUF526); hypothetical protein complement(2752465..2752713) Methylophaga nitratireducenticrescens 12845108 YP_006297141.1 CDS Q7A_2710 NC_017857.1 2753102 2753713 D PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; inaA protein 2753102..2753713 Methylophaga nitratireducenticrescens 12845109 YP_006297142.1 CDS Q7A_2711 NC_017857.1 2753753 2755213 R PFAM: Bacterial protein of unknown function (DUF853); ATPase complement(2753753..2755213) Methylophaga nitratireducenticrescens 12845110 YP_006297143.1 CDS Q7A_2712 NC_017857.1 2755425 2755862 D PFAM: Protein of unknown function (DUF1043); hypothetical protein 2755425..2755862 Methylophaga nitratireducenticrescens 12845111 YP_006297144.1 CDS Q7A_2713 NC_017857.1 2755859 2757613 R PFAM: Uncharacterized conserved protein (DUF2075); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha complement(2755859..2757613) Methylophaga nitratireducenticrescens 12845112 YP_006297145.1 CDS Q7A_2714 NC_017857.1 2757610 2761086 R PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta complement(2757610..2761086) Methylophaga nitratireducenticrescens 12845113 YP_006297146.1 CDS Q7A_2715 NC_017857.1 2761083 2764286 R PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma complement(2761083..2764286) Methylophaga nitratireducenticrescens 12845114 YP_006297147.1 CDS Q7A_2716 NC_017857.1 2764385 2764501 R hypothetical protein complement(2764385..2764501) Methylophaga nitratireducenticrescens 12845115 YP_006297148.1 CDS Q7A_2717 NC_017857.1 2764684 2764974 D hypothetical protein 2764684..2764974 Methylophaga nitratireducenticrescens 12845116 YP_006297149.1 CDS Q7A_2718 NC_017857.1 2765110 2765622 D PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 2765110..2765622 Methylophaga nitratireducenticrescens 12845117 YP_006297150.1 CDS Q7A_2719 NC_017857.1 2765609 2766538 D PFAM: Radical SAM superfamily; radical SAM family protein 2765609..2766538 Methylophaga nitratireducenticrescens 12845118 YP_006297151.1 CDS Q7A_2720 NC_017857.1 2766610 2766807 D hypothetical protein 2766610..2766807 Methylophaga nitratireducenticrescens 12845119 YP_006297152.1 CDS Q7A_2721 NC_017857.1 2766914 2768197 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein complement(2766914..2768197) Methylophaga nitratireducenticrescens 12845120 YP_006297153.1 CDS Q7A_2722 NC_017857.1 2768194 2768877 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein complement(2768194..2768877) Methylophaga nitratireducenticrescens 12845121 YP_006297154.1 CDS Q7A_2723 NC_017857.1 2769087 2770289 D PFAM: Outer membrane efflux protein; outer membrane efflux protein 2769087..2770289 Methylophaga nitratireducenticrescens 12845122 YP_006297155.1 CDS Q7A_2724 NC_017857.1 2770286 2771377 D Secretion protein HlyD 2770286..2771377 Methylophaga nitratireducenticrescens 12845123 YP_006297156.1 CDS Q7A_2725 NC_017857.1 2771377 2774463 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 2771377..2774463 Methylophaga nitratireducenticrescens 12845124 YP_006297157.1 CDS Q7A_2726 NC_017857.1 2774508 2774789 D PFAM: Protein of unknown function (DUF3240); hypothetical protein 2774508..2774789 Methylophaga nitratireducenticrescens 12845125 YP_006297158.1 CDS Q7A_2727 NC_017857.1 2774965 2775129 R hypothetical protein complement(2774965..2775129) Methylophaga nitratireducenticrescens 12845126 YP_006297159.1 CDS Q7A_2728 NC_017857.1 2775267 2776049 R hypothetical protein complement(2775267..2776049) Methylophaga nitratireducenticrescens 12845127 YP_006297160.1 CDS Q7A_2729 NC_017857.1 2776247 2777041 D PFAM: Calcineurin-like phosphoesterase; 3',5'-cyclic-nucleotide phosphodiesterase 2776247..2777041 Methylophaga nitratireducenticrescens 12845128 YP_006297161.1 CDS Q7A_2730 NC_017857.1 2777058 2777930 D PFAM: Diacylglycerol kinase catalytic domain; diacylglycerol kinase 2777058..2777930 Methylophaga nitratireducenticrescens 12845129 YP_006297162.1 CDS Q7A_2731 NC_017857.1 2777927 2778382 D hypothetical protein 2777927..2778382 Methylophaga nitratireducenticrescens 12845130 YP_006297163.1 CDS Q7A_2732 NC_017857.1 2778449 2779441 D 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 2778449..2779441 Methylophaga nitratireducenticrescens 12845131 YP_006297164.1 CDS Q7A_2733 NC_017857.1 2779513 2779800 R PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 complement(2779513..2779800) Methylophaga nitratireducenticrescens 12845132 YP_006297165.1 CDS Q7A_2734 NC_017857.1 2779793 2779969 R hypothetical protein complement(2779793..2779969) Methylophaga nitratireducenticrescens 12845133 YP_006297166.1 CDS Q7A_2735 NC_017857.1 2780085 2780657 R hypothetical protein complement(2780085..2780657) Methylophaga nitratireducenticrescens 12845134 YP_006297167.1 CDS Q7A_2736 NC_017857.1 2780758 2780877 D hypothetical protein 2780758..2780877 Methylophaga nitratireducenticrescens 12845135 YP_006297168.1 CDS Q7A_2737 NC_017857.1 2781040 2781813 D PFAM: LamB/YcsF family; Lactam utilization protein LamB 2781040..2781813 Methylophaga nitratireducenticrescens 12845136 YP_006297169.1 CDS Q7A_2738 NC_017857.1 2781813 2782505 D PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; allophanate hydrolase 2 subunit 1 2781813..2782505 Methylophaga nitratireducenticrescens 12845137 YP_006297170.1 CDS Q7A_2739 NC_017857.1 2782502 2783431 D PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; allophanate hydrolase 2 subunit 2 2782502..2783431 Methylophaga nitratireducenticrescens 12845138 YP_006297171.1 CDS Q7A_2740 NC_017857.1 2783619 2784488 R PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase complement(2783619..2784488) Methylophaga nitratireducenticrescens 12845139 YP_006297172.1 CDS Q7A_2741 NC_017857.1 2784537 2784815 R PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I complement(2784537..2784815) Methylophaga nitratireducenticrescens 12845140 YP_006297173.1 CDS Q7A_2742 NC_017857.1 2784895 2785275 R PFAM: Fructose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase class II complement(2784895..2785275) Methylophaga nitratireducenticrescens 12845141 YP_006297174.1 CDS Q7A_2743 NC_017857.1 2785364 2785480 D hypothetical protein 2785364..2785480 Methylophaga nitratireducenticrescens 12845142 YP_006297175.1 CDS Q7A_2744 NC_017857.1 2785644 2785838 D PFAM: Uncharacterized protein conserved in bacteria (DUF2191); transcriptional regulator of the Arc/MetJ class 2785644..2785838 Methylophaga nitratireducenticrescens 12845143 YP_006297176.1 CDS Q7A_2745 NC_017857.1 2785835 2786236 D PFAM: PIN domain; PilT protein domain-containing protein 2785835..2786236 Methylophaga nitratireducenticrescens 12845144 YP_006297177.1 CDS Q7A_2746 NC_017857.1 2786400 2786570 R hypothetical protein complement(2786400..2786570) Methylophaga nitratireducenticrescens 12845145 YP_006297178.1 CDS Q7A_2747 NC_017857.1 2786996 2787571 R PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein complement(2786996..2787571) Methylophaga nitratireducenticrescens 12845146 YP_006297179.1 CDS Q7A_2748 NC_017857.1 2787956 2788153 R hypothetical protein complement(2787956..2788153) Methylophaga nitratireducenticrescens 12845147 YP_006297180.1 CDS Q7A_2749 NC_017857.1 2788373 2789812 R hypothetical protein complement(2788373..2789812) Methylophaga nitratireducenticrescens 12845148 YP_006297181.1 CDS Q7A_2750 NC_017857.1 2790000 2790704 R PFAM: Protein of unknown function DUF88; TIGRFAM: TIGR00288 family protein; hypothetical protein complement(2790000..2790704) Methylophaga nitratireducenticrescens 12845149 YP_006297182.1 CDS Q7A_2751 NC_017857.1 2791267 2791392 D PFAM: Uncharacterised protein family (UPF0156); transcriptional regulator 2791267..2791392 Methylophaga nitratireducenticrescens 12845150 YP_006297183.1 CDS Q7A_2752 NC_017857.1 2791539 2791688 D PFAM: Plasmid stabilisation system protein; ParE toxin protein 2791539..2791688 Methylophaga nitratireducenticrescens 12845151 YP_006297184.1 CDS Q7A_2753 NC_017857.1 2791724 2791861 R TIGRFAM: addiction module antidote protein, HigA family; HigA protein (antitoxin to HigB) complement(2791724..2791861) Methylophaga nitratireducenticrescens 12845152 YP_006297185.1 CDS Q7A_2754 NC_017857.1 2792017 2792202 R PFAM: Plasmid maintenance system killer protein; HigB toxin protein complement(2792017..2792202) Methylophaga nitratireducenticrescens 12845153 YP_006297186.1 CDS Q7A_2755 NC_017857.1 2792974 2793159 R hypothetical protein complement(2792974..2793159) Methylophaga nitratireducenticrescens 12845154 YP_006297187.1 CDS Q7A_2756 NC_017857.1 2793176 2793490 R PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; HigA protein (antitoxin to HigB) complement(2793176..2793490) Methylophaga nitratireducenticrescens 12845155 YP_006297188.1 CDS Q7A_2757 NC_017857.1 2793501 2793743 R PFAM: Plasmid maintenance system killer protein; HigB toxin protein complement(2793501..2793743) Methylophaga nitratireducenticrescens 12845156 YP_006297189.1 CDS Q7A_2758 NC_017857.1 2793990 2794322 D hypothetical protein 2793990..2794322 Methylophaga nitratireducenticrescens 12845157 YP_006297190.1 CDS Q7A_2759 NC_017857.1 2794403 2795185 D PFAM: Multicopper oxidase; multicopper oxidase 2794403..2795185 Methylophaga nitratireducenticrescens 12845158 YP_006297191.1 CDS Q7A_2760 NC_017857.1 2795172 2795900 D PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B 2795172..2795900 Methylophaga nitratireducenticrescens 12845159 YP_006297192.1 CDS Q7A_2761 NC_017857.1 2796083 2798299 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 2796083..2798299 Methylophaga nitratireducenticrescens 12845160 YP_006297193.1 CDS Q7A_2762 NC_017857.1 2798359 2798835 R PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; hemolysin III-like membrane protein complement(2798359..2798835) Methylophaga nitratireducenticrescens 12845161 YP_006297194.1 CDS Q7A_2763 NC_017857.1 2799339 2800508 D PFAM: PRC-barrel domain; PRC-barrel protein 2799339..2800508 Methylophaga nitratireducenticrescens 12845162 YP_006297195.1 CDS Q7A_2764 NC_017857.1 2800542 2800673 R hypothetical protein complement(2800542..2800673) Methylophaga nitratireducenticrescens 12845163 YP_006297196.1 CDS Q7A_2765 NC_017857.1 2800678 2802297 R PFAM: Domain of unknown function (DUF477); methanol dehydrogenase complement(2800678..2802297) Methylophaga nitratireducenticrescens 12845164 YP_006297197.1 CDS Q7A_2766 NC_017857.1 2802359 2803276 R PFAM: LemA family; hypothetical protein complement(2802359..2803276) Methylophaga nitratireducenticrescens 12845165 YP_006297198.1 CDS Q7A_2767 NC_017857.1 2803266 2803586 R PFAM: Protein of unknown function(DUF2089); hypothetical protein complement(2803266..2803586) Methylophaga nitratireducenticrescens 12845166 YP_006297199.1 CDS Q7A_2768 NC_017857.1 2803739 2803864 R hypothetical protein complement(2803739..2803864) Methylophaga nitratireducenticrescens 12845167 YP_006297200.1 CDS Q7A_2769 NC_017857.1 2804266 2805189 R PFAM: EamA-like transporter family; EamA-like transporter family complement(2804266..2805189) Methylophaga nitratireducenticrescens 12845168 YP_006297201.1 CDS Q7A_2770 NC_017857.1 2805180 2806361 R hypothetical protein complement(2805180..2806361) Methylophaga nitratireducenticrescens 12845169 YP_006297202.1 CDS Q7A_2771 NC_017857.1 2806823 2807419 R PFAM: Acetyltransferase (GNAT) family; mobC protein complement(2806823..2807419) Methylophaga nitratireducenticrescens 12845170 YP_006297203.1 CDS Q7A_2772 NC_017857.1 2807488 2807946 R PFAM: Acetyltransferase (GNAT) family; elaA protein complement(2807488..2807946) Methylophaga nitratireducenticrescens 12845171 YP_006297204.1 CDS Q7A_2773 NC_017857.1 2807964 2808635 R hypothetical protein complement(2807964..2808635) Methylophaga nitratireducenticrescens 12845172 YP_006297205.1 CDS Q7A_2774 NC_017857.1 2808632 2809564 R PFAM: Aldo/keto reductase family; oxidoreductase protein complement(2808632..2809564) Methylophaga nitratireducenticrescens 12845173 YP_006297206.1 CDS Q7A_2775 NC_017857.1 2809600 2809725 D hypothetical protein 2809600..2809725 Methylophaga nitratireducenticrescens 12845174 YP_006297207.1 CDS Q7A_2776 NC_017857.1 2809836 2810141 D hypothetical protein 2809836..2810141 Methylophaga nitratireducenticrescens 12845175 YP_006297208.1 CDS Q7A_2779 NC_017857.1 2811837 2812184 D PFAM: Protein of unknown function (DUF3325); hypothetical protein 2811837..2812184 Methylophaga nitratireducenticrescens 12845177 YP_006297209.1 CDS Q7A_2782 NC_017857.1 2815902 2817923 R PFAM: DNA methylase; type III restriction-modification system methylation subunit complement(2815902..2817923) Methylophaga nitratireducenticrescens 12845179 YP_006297210.1 CDS Q7A_2783 NC_017857.1 2817933 2819096 R PFAM: Fic/DOC family; Fic family protein complement(2817933..2819096) Methylophaga nitratireducenticrescens 12845180 YP_006297211.1 CDS Q7A_2784 NC_017857.1 2819262 2821973 R PFAM: Type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(2819262..2821973) Methylophaga nitratireducenticrescens 12845181 YP_006297212.1 CDS Q7A_2785 NC_017857.1 2822123 2823394 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; sulfide-quinone reductase complement(2822123..2823394) Methylophaga nitratireducenticrescens 12845182 YP_006297213.1 CDS Q7A_2786 NC_017857.1 2823407 2824303 R PFAM: Hsp33 protein; 33 kDa chaperonin (Heat shock protein 33) (HSP33) complement(2823407..2824303) Methylophaga nitratireducenticrescens 12845183 YP_006297214.1 CDS Q7A_2787 NC_017857.1 2824431 2825462 R hypothetical protein complement(2824431..2825462) Methylophaga nitratireducenticrescens 12845184 YP_006297215.1 CDS Q7A_2788 NC_017857.1 2825610 2826494 R PFAM: Transposase DDE domain; transposase, IS982 family complement(2825610..2826494) Methylophaga nitratireducenticrescens 12845185 YP_006297216.1 CDS Q7A_2789 NC_017857.1 2826758 2827948 D PFAM: Fic/DOC family; Filamentation induced by cAMP protein Fic 2826758..2827948 Methylophaga nitratireducenticrescens 12845186 YP_006297217.1 CDS Q7A_2790 NC_017857.1 2828016 2829923 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; chaperone protein HtpG complement(2828016..2829923) Methylophaga nitratireducenticrescens 12845187 YP_006297218.1 CDS Q7A_2791 NC_017857.1 2830375 2832387 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein I (serine chemoreceptor protein) complement(2830375..2832387) Methylophaga nitratireducenticrescens 12845188 YP_006297219.1 CDS Q7A_2792 NC_017857.1 2832402 2834894 R PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2832402..2834894) Methylophaga nitratireducenticrescens 12845189 YP_006297220.1 CDS Q7A_2793 NC_017857.1 2835339 2836091 D PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase family protein 2835339..2836091 Methylophaga nitratireducenticrescens 12845190 YP_006297221.1 CDS Q7A_2794 NC_017857.1 2836197 2837132 D PFAM: Domain of unknown function (DUF897); sodium-dependent bicarbonate transporter 2836197..2837132 Methylophaga nitratireducenticrescens 12845191 YP_006297222.1 CDS Q7A_2795 NC_017857.1 2837251 2838171 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Cobalt-zinc-cadmium resistance protein CzcD 2837251..2838171 Methylophaga nitratireducenticrescens 12845192 YP_006297223.1 CDS Q7A_2796 NC_017857.1 2838190 2838522 R hypothetical protein complement(2838190..2838522) Methylophaga nitratireducenticrescens 12845193 YP_006297224.1 CDS Q7A_2797 NC_017857.1 2838795 2839094 D PFAM: Protein of unknown function (DUF421); hypothetical protein 2838795..2839094 Methylophaga nitratireducenticrescens 12845194 YP_006297225.1 CDS Q7A_2798 NC_017857.1 2839207 2839542 D PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein 2839207..2839542 Methylophaga nitratireducenticrescens 12845195 YP_006297226.1 CDS Q7A_2799 NC_017857.1 2839574 2840029 R PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative; Histone acetyltransferase HPA2-related acetyltransferase complement(2839574..2840029) Methylophaga nitratireducenticrescens 12845196 YP_006297227.1 CDS Q7A_2800 NC_017857.1 2840039 2840737 R PFAM: Glutamine amidotransferase class-I; GMP synthase complement(2840039..2840737) Methylophaga nitratireducenticrescens 12845197 YP_006297228.1 CDS Q7A_2801 NC_017857.1 2840961 2841503 D PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein; hypothetical protein 2840961..2841503 Methylophaga nitratireducenticrescens 12845198 YP_006297229.1 CDS Q7A_2802 NC_017857.1 2841588 2841737 D PFAM: Protein of unknown function (DUF3096); hypothetical protein 2841588..2841737 Methylophaga nitratireducenticrescens 12845199 YP_006297230.1 CDS Q7A_2803 NC_017857.1 2841908 2842231 R hypothetical protein complement(2841908..2842231) Methylophaga nitratireducenticrescens 12845200 YP_006297231.1 CDS Q7A_2804 NC_017857.1 2842320 2842712 R PFAM: AIG2-like family; hypothetical protein complement(2842320..2842712) Methylophaga nitratireducenticrescens 12845201 YP_006297232.1 CDS Q7A_2805 NC_017857.1 2843041 2843976 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl-Q-tRNA synthetase 2843041..2843976 Methylophaga nitratireducenticrescens 12845202 YP_006297233.1 CDS Q7A_2806 NC_017857.1 2843986 2844486 R hypothetical protein complement(2843986..2844486) Methylophaga nitratireducenticrescens 12845203 YP_006297234.1 CDS Q7A_2807 NC_017857.1 2844511 2844816 R PFAM: Protein of unknown function (DUF1311); hypothetical protein complement(2844511..2844816) Methylophaga nitratireducenticrescens 12845204 YP_006297235.1 CDS Q7A_2808 NC_017857.1 2844971 2846530 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2844971..2846530) Methylophaga nitratireducenticrescens 12845205 YP_006297236.1 CDS Q7A_2809 NC_017857.1 2846717 2848936 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; haloacid dehalogenase-like hydrolase complement(2846717..2848936) Methylophaga nitratireducenticrescens 12845206 YP_006297237.1 CDS Q7A_2810 NC_017857.1 2849218 2850747 D PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; carbon-nitrogen hydrolase 2849218..2850747 Methylophaga nitratireducenticrescens 12845207 YP_006297238.1 CDS Q7A_2811 NC_017857.1 2850753 2852186 R PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG complement(2850753..2852186) Methylophaga nitratireducenticrescens 12845208 YP_006297239.1 CDS Q7A_2812 NC_017857.1 2852206 2853597 R PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; transcriptional regulator/ Aspartate aminotransferase complement(2852206..2853597) Methylophaga nitratireducenticrescens 12845209 YP_006297240.1 CDS Q7A_2813 NC_017857.1 2853835 2856423 R PFAM: EAL domain; GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(2853835..2856423) Methylophaga nitratireducenticrescens 12845210 YP_006297241.1 CDS Q7A_2814 NC_017857.1 2856497 2857045 R PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase complement(2856497..2857045) Methylophaga nitratireducenticrescens 12845211 YP_006297242.1 CDS Q7A_2815 NC_017857.1 2857047 2858330 R PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2857047..2858330) Methylophaga nitratireducenticrescens 12845212 YP_006297243.1 CDS Q7A_2816 NC_017857.1 2858494 2859264 R PFAM: Protein of unknown function (DUF328); hypothetical protein complement(2858494..2859264) Methylophaga nitratireducenticrescens 12845213 YP_006297244.1 CDS Q7A_2817 NC_017857.1 2859287 2859652 R lipase complement(2859287..2859652) Methylophaga nitratireducenticrescens 12845214 YP_006297245.1 CDS Q7A_2818 NC_017857.1 2859813 2860340 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; TRAP-type mannitol/chloroaromatic compound transport system, small permease component 2859813..2860340 Methylophaga nitratireducenticrescens 12845215 YP_006297246.1 CDS Q7A_2819 NC_017857.1 2860340 2861644 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2860340..2861644 Methylophaga nitratireducenticrescens 12845216 YP_006297247.1 CDS Q7A_2820 NC_017857.1 2861646 2862611 R PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX; translation elongation factor P Lys34:lysine transferase complement(2861646..2862611) Methylophaga nitratireducenticrescens 12845217 YP_006297248.1 CDS Q7A_2821 NC_017857.1 2862684 2863211 R PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P complement(2862684..2863211) Methylophaga nitratireducenticrescens 12845218 YP_006297249.1 CDS Q7A_2822 NC_017857.1 2863310 2864317 D PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein; Lysyl-lysine 2,3-aminomutase 2863310..2864317 Methylophaga nitratireducenticrescens 12845219 YP_006297250.1 CDS Q7A_2823 NC_017857.1 2864307 2865482 R PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Citrate synthase (si) complement(2864307..2865482) Methylophaga nitratireducenticrescens 12845220 YP_006297251.1 CDS Q7A_2824 NC_017857.1 2865594 2866865 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit complement(2865594..2866865) Methylophaga nitratireducenticrescens 12845221 YP_006297252.1 CDS Q7A_2825 NC_017857.1 2866896 2867855 R PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoate synthase complement(2866896..2867855) Methylophaga nitratireducenticrescens 12845222 YP_006297253.1 CDS Q7A_2826 NC_017857.1 2867858 2868466 R PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase complement(2867858..2868466) Methylophaga nitratireducenticrescens 12845223 YP_006297254.1 CDS Q7A_2827 NC_017857.1 2868466 2868741 R PFAM: Protein of unknown function (DUF493); lipoate regulatory protein YbeD complement(2868466..2868741) Methylophaga nitratireducenticrescens 12845224 YP_006297255.1 CDS Q7A_2828 NC_017857.1 2868741 2869586 R PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; D-alanine aminotransferase complement(2868741..2869586) Methylophaga nitratireducenticrescens 12845225 YP_006297256.1 CDS Q7A_2829 NC_017857.1 2869593 2870741 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(2869593..2870741) Methylophaga nitratireducenticrescens 12845226 YP_006297257.1 CDS Q7A_2830 NC_017857.1 2870766 2871617 R PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; Rare lipoprotein A complement(2870766..2871617) Methylophaga nitratireducenticrescens 12845227 YP_006297258.1 CDS Q7A_2831 NC_017857.1 2871614 2872594 R TIGRFAM: lytic murein transglycosylase B; membrane-bound lytic murein transglycosylase B precursor complement(2871614..2872594) Methylophaga nitratireducenticrescens 12845228 YP_006297259.1 CDS Q7A_2832 NC_017857.1 2872591 2873664 R PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Rod shape-determining protein RodA complement(2872591..2873664) Methylophaga nitratireducenticrescens 12845229 YP_006297260.1 CDS Q7A_2833 NC_017857.1 2873744 2875612 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 (PBP-2) complement(2873744..2875612) Methylophaga nitratireducenticrescens 12845230 YP_006297261.1 CDS Q7A_2834 NC_017857.1 2875615 2876091 R PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; Rod shape-determining protein MreD complement(2875615..2876091) Methylophaga nitratireducenticrescens 12845231 YP_006297262.1 CDS Q7A_2835 NC_017857.1 2876091 2876981 R PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; Rod shape-determining protein MreC complement(2876091..2876981) Methylophaga nitratireducenticrescens 12845232 YP_006297263.1 CDS Q7A_2836 NC_017857.1 2877108 2878241 R PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; Rod shape-determining protein MreB complement(2877108..2878241) Methylophaga nitratireducenticrescens 12845233 YP_006297264.1 CDS Q7A_2837 NC_017857.1 2878275 2878562 D PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Aspartyl-tRNA(Asn) amidotransferase subunit C @ Glutamyl-tRNA(Gln) amidotransferase subunit C 2878275..2878562 Methylophaga nitratireducenticrescens 12845234 YP_006297265.1 CDS Q7A_2838 NC_017857.1 2878583 2880037 D PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A 2878583..2880037 Methylophaga nitratireducenticrescens 12845235 YP_006297266.1 CDS Q7A_2839 NC_017857.1 2880254 2881891 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-requiring enzyme 2880254..2881891 Methylophaga nitratireducenticrescens 12845236 YP_006297267.1 CDS Q7A_2840 NC_017857.1 2881893 2882396 D PFAM: AhpC/TSA family; thioredoxin 2881893..2882396 Methylophaga nitratireducenticrescens 12845237 YP_006297268.1 CDS Q7A_2841 NC_017857.1 2882521 2882757 D PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 2882521..2882757 Methylophaga nitratireducenticrescens 12845238 YP_006297269.1 CDS Q7A_2842 NC_017857.1 2882769 2882924 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 2882769..2882924 Methylophaga nitratireducenticrescens 12845239 YP_006297270.1 CDS Q7A_2843 NC_017857.1 2883032 2884246 D PFAM: EAL domain; HDOD domain; signal transduction protein 2883032..2884246 Methylophaga nitratireducenticrescens 12845240 YP_006297271.1 CDS Q7A_2844 NC_017857.1 2884253 2885197 D PFAM: ABC transporter; multidrug ABC transporter ATPase 2884253..2885197 Methylophaga nitratireducenticrescens 12845241 YP_006297272.1 CDS Q7A_2845 NC_017857.1 2885197 2885949 D ABC transporter permease 2885197..2885949 Methylophaga nitratireducenticrescens 12845242 YP_006297273.1 CDS Q7A_2846 NC_017857.1 2885952 2887313 D PFAM: ABC-type uncharacterized transport system; mucin 2 2885952..2887313 Methylophaga nitratireducenticrescens 12845243 YP_006297274.1 CDS Q7A_2847 NC_017857.1 2887310 2888179 D hypothetical protein 2887310..2888179 Methylophaga nitratireducenticrescens 12845244 YP_006297275.1 CDS Q7A_2848 NC_017857.1 2888181 2888999 D PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase 2888181..2888999 Methylophaga nitratireducenticrescens 12845245 YP_006297276.1 CDS Q7A_2849 NC_017857.1 2889007 2889291 R PFAM: Cytochrome c; cytochrome c, class I complement(2889007..2889291) Methylophaga nitratireducenticrescens 12845246 YP_006297277.1 CDS Q7A_2850 NC_017857.1 2889369 2890334 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase D 2889369..2890334 Methylophaga nitratireducenticrescens 12845247 YP_006297278.1 CDS Q7A_2851 NC_017857.1 2890350 2891543 D PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; chromate transport protein ChrA 2890350..2891543 Methylophaga nitratireducenticrescens 12845248 YP_006297279.1 CDS Q7A_2854 NC_017857.1 2892893 2893411 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor 2892893..2893411 Methylophaga nitratireducenticrescens 12845250 YP_006297280.1 CDS Q7A_2855 NC_017857.1 2893420 2893830 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB complement(2893420..2893830) Methylophaga nitratireducenticrescens 12845251 YP_006297281.1 CDS Q7A_2856 NC_017857.1 2893785 2894066 D hypothetical protein 2893785..2894066 Methylophaga nitratireducenticrescens 12845252 YP_006297282.1 CDS Q7A_2857 NC_017857.1 2894360 2894791 R PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1; biopolymer transport protein ExbD/TolR complement(2894360..2894791) Methylophaga nitratireducenticrescens 12845253 YP_006297283.1 CDS Q7A_2858 NC_017857.1 2894788 2895702 R PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB; motA/TolQ/ExbB proton channel family protein complement(2894788..2895702) Methylophaga nitratireducenticrescens 12845254 YP_006297284.1 CDS Q7A_2859 NC_017857.1 2895751 2896137 R PFAM: Protein of unknown function (DUF454); hypothetical protein complement(2895751..2896137) Methylophaga nitratireducenticrescens 12845255 YP_006297285.1 CDS Q7A_2860 NC_017857.1 2896137 2896760 R PFAM: Heme oxygenase; Heme oxygenase HemO complement(2896137..2896760) Methylophaga nitratireducenticrescens 12845256 YP_006297286.1 CDS Q7A_2861 NC_017857.1 2896846 2898165 R hypothetical protein complement(2896846..2898165) Methylophaga nitratireducenticrescens 12845257 YP_006297287.1 CDS Q7A_2862 NC_017857.1 2898194 2899768 R PFAM: Protein of unknown function (DUF560); hypothetical protein complement(2898194..2899768) Methylophaga nitratireducenticrescens 12845258 YP_006297288.1 CDS Q7A_2863 NC_017857.1 2899782 2900522 R hypothetical protein complement(2899782..2900522) Methylophaga nitratireducenticrescens 12845259 YP_006297289.1 CDS Q7A_2864 NC_017857.1 2900610 2903651 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; Ton-B dependent hemine receptor complement(2900610..2903651) Methylophaga nitratireducenticrescens 12845260 YP_006297290.1 CDS Q7A_2865 NC_017857.1 2903793 2904749 R PFAM: FecR protein; FecR protein complement(2903793..2904749) Methylophaga nitratireducenticrescens 12845261 YP_006297291.1 CDS Q7A_2866 NC_017857.1 2904976 2906928 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G complement(2904976..2906928) Methylophaga nitratireducenticrescens 12845262 YP_006297292.1 CDS Q7A_2867 NC_017857.1 2906944 2907057 D hypothetical protein 2906944..2907057 Methylophaga nitratireducenticrescens 12845263 YP_006297293.1 CDS Q7A_2868 NC_017857.1 2907261 2907566 R PFAM: Protein of unknown function (DUF2818); transmembrane protein complement(2907261..2907566) Methylophaga nitratireducenticrescens 12845264 YP_006297294.1 CDS Q7A_2869 NC_017857.1 2907575 2909008 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH-ubiquinone oxidoreductase subunit N complement(2907575..2909008) Methylophaga nitratireducenticrescens 12845265 YP_006297295.1 CDS Q7A_2870 NC_017857.1 2909021 2910541 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; NADH-ubiquinone oxidoreductase subunit M complement(2909021..2910541) Methylophaga nitratireducenticrescens 12845266 YP_006297296.1 CDS Q7A_2871 NC_017857.1 2910557 2912494 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH-ubiquinone oxidoreductase subunit L complement(2910557..2912494) Methylophaga nitratireducenticrescens 12845267 YP_006297297.1 CDS Q7A_2872 NC_017857.1 2912499 2912804 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit K complement(2912499..2912804) Methylophaga nitratireducenticrescens 12845268 YP_006297298.1 CDS Q7A_2873 NC_017857.1 2912801 2913409 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone oxidoreductase subunit J complement(2912801..2913409) Methylophaga nitratireducenticrescens 12845269 YP_006297299.1 CDS Q7A_2874 NC_017857.1 2913421 2913912 R TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-ubiquinone oxidoreductase subunit I complement(2913421..2913912) Methylophaga nitratireducenticrescens 12845270 YP_006297300.1 CDS Q7A_2875 NC_017857.1 2913909 2914961 R PFAM: NADH dehydrogenase; NADH-ubiquinone oxidoreductase subunit H complement(2913909..2914961) Methylophaga nitratireducenticrescens 12845271 YP_006297301.1 CDS Q7A_2876 NC_017857.1 2914954 2917317 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G; NADH-ubiquinone oxidoreductase subunit G complement(2914954..2917317) Methylophaga nitratireducenticrescens 12845272 YP_006297302.1 CDS Q7A_2877 NC_017857.1 2917310 2918608 R PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH-ubiquinone oxidoreductase subunit F complement(2917310..2918608) Methylophaga nitratireducenticrescens 12845273 YP_006297303.1 CDS Q7A_2878 NC_017857.1 2918608 2919120 R PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-ubiquinone oxidoreductase subunit E complement(2918608..2919120) Methylophaga nitratireducenticrescens 12845274 YP_006297304.1 CDS Q7A_2879 NC_017857.1 2919117 2920370 R PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH-ubiquinone oxidoreductase subunit D complement(2919117..2920370) Methylophaga nitratireducenticrescens 12845275 YP_006297305.1 CDS Q7A_2880 NC_017857.1 2920370 2921038 R PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH-ubiquinone oxidoreductase subunit C complement(2920370..2921038) Methylophaga nitratireducenticrescens 12845276 YP_006297306.1 CDS Q7A_2881 NC_017857.1 2921048 2921536 R PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-ubiquinone oxidoreductase subunit B complement(2921048..2921536) Methylophaga nitratireducenticrescens 12845277 YP_006297307.1 CDS Q7A_2882 NC_017857.1 2921527 2921859 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH ubiquinone oxidoreductase subunit A complement(2921527..2921859) Methylophaga nitratireducenticrescens 12845278 YP_006297308.1 CDS Q7A_2883 NC_017857.1 2922319 2923209 D PFAM: EamA-like transporter family; TIGRFAM: rarD protein; protein rarD 2922319..2923209 Methylophaga nitratireducenticrescens 12845279 YP_006297309.1 CDS Q7A_2886 NC_017857.1 2924219 2925094 R PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial; hypothetical protein complement(2924219..2925094) Methylophaga nitratireducenticrescens 12845281 YP_006297310.1 CDS Q7A_2887 NC_017857.1 2925091 2926635 R hypothetical protein complement(2925091..2926635) Methylophaga nitratireducenticrescens 12845282 YP_006297311.1 CDS Q7A_2888 NC_017857.1 2926729 2927169 R PFAM: Ethanolamine utilisation protein EutQ; ethanolamine utilization protein complement(2926729..2927169) Methylophaga nitratireducenticrescens 12845283 YP_006297312.1 CDS Q7A_2889 NC_017857.1 2927424 2928803 D PFAM: Helix-turn-helix; PAS fold; TIGRFAM: PAS domain S-box; hypothetical protein 2927424..2928803 Methylophaga nitratireducenticrescens 12845284 YP_006297313.1 CDS Q7A_2890 NC_017857.1 2929418 2929555 D ISDet2, transposase orfB 2929418..2929555 Methylophaga nitratireducenticrescens 12845285 YP_006297314.1 CDS Q7A_2891 NC_017857.1 2929821 2931026 R PFAM: Phage integrase family; integrase complement(2929821..2931026) Methylophaga nitratireducenticrescens 12845286 YP_006297315.1 CDS Q7A_2893 NC_017857.1 2931295 2931621 R PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; TC 3.A.5.1.1; preprotein translocase subunit SecG complement(2931295..2931621) Methylophaga nitratireducenticrescens 12845288 YP_006297316.1 CDS Q7A_2894 NC_017857.1 2931630 2932409 R PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase complement(2931630..2932409) Methylophaga nitratireducenticrescens 12845289 YP_006297317.1 CDS Q7A_2895 NC_017857.1 2932513 2933862 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase complement(2932513..2933862) Methylophaga nitratireducenticrescens 12845290 YP_006297318.1 CDS Q7A_2896 NC_017857.1 2933855 2934694 R PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase complement(2933855..2934694) Methylophaga nitratireducenticrescens 12845291 YP_006297319.1 CDS Q7A_2897 NC_017857.1 2934708 2936609 R PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; cell division protein FtsH complement(2934708..2936609) Methylophaga nitratireducenticrescens 12845292 YP_006297320.1 CDS Q7A_2898 NC_017857.1 2936655 2937272 R PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J complement(2936655..2937272) Methylophaga nitratireducenticrescens 12845293 YP_006297321.1 CDS Q7A_2899 NC_017857.1 2937274 2937738 R transmembrane protein complement(2937274..2937738) Methylophaga nitratireducenticrescens 12845294 YP_006297322.1 CDS Q7A_2900 NC_017857.1 2937742 2938218 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA complement(2937742..2938218) Methylophaga nitratireducenticrescens 12845295 YP_006297323.1 CDS Q7A_2901 NC_017857.1 2938218 2941436 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(2938218..2941436) Methylophaga nitratireducenticrescens 12845296 YP_006297324.1 CDS Q7A_2902 NC_017857.1 2941443 2942573 R PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(2941443..2942573) Methylophaga nitratireducenticrescens 12845298 YP_006297325.1 CDS Q7A_2903 NC_017857.1 2942738 2943748 D PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2942738..2943748 Methylophaga nitratireducenticrescens 12845299 YP_006297326.1 CDS Q7A_2904 NC_017857.1 2943751 2944572 D PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 2943751..2944572 Methylophaga nitratireducenticrescens 12845300 YP_006297327.1 CDS Q7A_2905 NC_017857.1 2944633 2945094 R hypothetical protein complement(2944633..2945094) Methylophaga nitratireducenticrescens 12845301 YP_006297328.1 CDS Q7A_2906 NC_017857.1 2945279 2945965 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 2945279..2945965 Methylophaga nitratireducenticrescens 12845302 YP_006297329.1 CDS Q7A_2907 NC_017857.1 2945965 2947305 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel histidine kinase KdpD 2945965..2947305 Methylophaga nitratireducenticrescens 12845303 YP_006297330.1 CDS Q7A_2908 NC_017857.1 2947332 2947844 R PFAM: Copper/zinc superoxide dismutase (SODC); superoxide dismutase (Cu-Zn) precursor complement(2947332..2947844) Methylophaga nitratireducenticrescens 12845304 YP_006297331.1 CDS Q7A_2909 NC_017857.1 2947931 2951107 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; inner membrane transporter CmeB complement(2947931..2951107) Methylophaga nitratireducenticrescens 12845305 YP_006297332.1 CDS Q7A_2910 NC_017857.1 2951104 2952279 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein complement(2951104..2952279) Methylophaga nitratireducenticrescens 12845306 YP_006297333.1 CDS Q7A_2911 NC_017857.1 2952426 2952923 D PFAM: MarR family; marR family transcriptional regulator 2952426..2952923 Methylophaga nitratireducenticrescens 12845307 YP_006297334.1 CDS Q7A_2912 NC_017857.1 2953176 2953481 R PFAM: Cell division protein ZapA; Z-ring-associated protein ZapA complement(2953176..2953481) Methylophaga nitratireducenticrescens 12845308 YP_006297335.1 CDS Q7A_2913 NC_017857.1 2953478 2953687 R TIGRFAM: TIGR02449 family protein; hypothetical protein complement(2953478..2953687) Methylophaga nitratireducenticrescens 12845309 YP_006297336.1 CDS Q7A_2914 NC_017857.1 2953793 2954341 D PFAM: Uncharacterised protein family (UPF0149); hypothetical protein 2953793..2954341 Methylophaga nitratireducenticrescens 12845310 YP_006297337.1 CDS Q7A_2915 NC_017857.1 2954341 2955651 D PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Xaa-Pro aminopeptidase 2954341..2955651 Methylophaga nitratireducenticrescens 12845311 YP_006297338.1 CDS Q7A_2916 NC_017857.1 2955656 2956858 D PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenol hydroxylase 2955656..2956858 Methylophaga nitratireducenticrescens 12845312 YP_006297339.1 CDS Q7A_2917 NC_017857.1 2956855 2958027 D PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2956855..2958027 Methylophaga nitratireducenticrescens 12845313 YP_006297340.1 CDS Q7A_2918 NC_017857.1 2958032 2958724 R lipoprotein complement(2958032..2958724) Methylophaga nitratireducenticrescens 12845314 YP_006297341.1 CDS Q7A_2919 NC_017857.1 2958711 2958965 R hypothetical protein complement(2958711..2958965) Methylophaga nitratireducenticrescens 12845315 YP_006297342.1 CDS Q7A_2920 NC_017857.1 2959027 2960343 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase RhlB complement(2959027..2960343) Methylophaga nitratireducenticrescens 12845316 YP_006297343.1 CDS Q7A_2921 NC_017857.1 2960444 2960770 D PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 2960444..2960770 Methylophaga nitratireducenticrescens 12845317 YP_006297344.1 CDS Q7A_2922 NC_017857.1 2960901 2963063 D PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; ATP-dependent DNA helicase UvrD/PcrA 2960901..2963063 Methylophaga nitratireducenticrescens 12845318 YP_006297345.1 CDS Q7A_2923 NC_017857.1 2963079 2964176 D PFAM: Bacterial extracellular solute-binding protein, family 7; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 2963079..2964176 Methylophaga nitratireducenticrescens 12845319 YP_006297346.1 CDS Q7A_2924 NC_017857.1 2964179 2964430 D hypothetical protein 2964179..2964430 Methylophaga nitratireducenticrescens 12845320 YP_006297347.1 CDS Q7A_2925 NC_017857.1 2964417 2964950 D PFAM: Protein of unknown function, DUF; copper amine oxidase N-terminal protein 2964417..2964950 Methylophaga nitratireducenticrescens 12845321 YP_006297348.1 CDS Q7A_2926 NC_017857.1 2964950 2965822 D PFAM: EamA-like transporter family; drug/metabolite transporter (DMT) superfamily permease 2964950..2965822 Methylophaga nitratireducenticrescens 12845322 YP_006297349.1 CDS Q7A_2927 NC_017857.1 2965921 2966817 D PFAM: DEAD/DEAH box helicase; ATP-dependent RNA helicase SrmB 2965921..2966817 Methylophaga nitratireducenticrescens 12845323 YP_006297350.1 CDS Q7A_2928 NC_017857.1 2967018 2967140 D hypothetical protein 2967018..2967140 Methylophaga nitratireducenticrescens 12845324 YP_006297351.1 CDS Q7A_2929 NC_017857.1 2967137 2969980 R PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(2967137..2969980) Methylophaga nitratireducenticrescens 12845325 YP_006297352.1 CDS Q7A_2930 NC_017857.1 2969977 2971443 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen synthase complement(2969977..2971443) Methylophaga nitratireducenticrescens 12845326 YP_006297353.1 CDS Q7A_2931 NC_017857.1 2971522 2972991 D PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2971522..2972991 Methylophaga nitratireducenticrescens 12845327 YP_006297354.1 CDS Q7A_2932 NC_017857.1 2973064 2973765 R PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase complement(2973064..2973765) Methylophaga nitratireducenticrescens 12845328 YP_006297355.1 CDS Q7A_2933 NC_017857.1 2974040 2974447 D PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 2974040..2974447 Methylophaga nitratireducenticrescens 12845329 YP_006297356.1 CDS Q7A_2934 NC_017857.1 2974497 2975006 D PFAM: Flagellar basal body-associated protein FliL; flagellar biosynthesis protein FliL 2974497..2975006 Methylophaga nitratireducenticrescens 12845330 YP_006297357.1 CDS Q7A_2935 NC_017857.1 2975009 2976031 D PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 2975009..2976031 Methylophaga nitratireducenticrescens 12845331 YP_006297358.1 CDS Q7A_2936 NC_017857.1 2976028 2976486 D PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein FliN 2976028..2976486 Methylophaga nitratireducenticrescens 12845332 YP_006297359.1 CDS Q7A_2937 NC_017857.1 2976483 2976905 D PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biosynthesis protein FliQ 2976483..2976905 Methylophaga nitratireducenticrescens 12845333 YP_006297360.1 CDS Q7A_2938 NC_017857.1 2976905 2977642 D PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthesis protein FliP 2976905..2977642 Methylophaga nitratireducenticrescens 12845334 YP_006297361.1 CDS Q7A_2939 NC_017857.1 2977645 2977914 D PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthesis protein FliQ 2977645..2977914 Methylophaga nitratireducenticrescens 12845335 YP_006297362.1 CDS Q7A_2940 NC_017857.1 2977917 2978699 D PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthesis protein FliR 2977917..2978699 Methylophaga nitratireducenticrescens 12845336 YP_006297363.1 CDS Q7A_2941 NC_017857.1 2978692 2979831 D PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthesis protein FlhB 2978692..2979831 Methylophaga nitratireducenticrescens 12845337 YP_006297364.1 CDS Q7A_2942 NC_017857.1 2979835 2981913 D PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 2979835..2981913 Methylophaga nitratireducenticrescens 12845338 YP_006297365.1 CDS Q7A_2943 NC_017857.1 2981929 2983131 D PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthesis protein FlhF 2981929..2983131 Methylophaga nitratireducenticrescens 12845339 YP_006297366.1 CDS Q7A_2944 NC_017857.1 2983124 2983996 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; flagellar synthesis regulator FleN 2983124..2983996 Methylophaga nitratireducenticrescens 12845340 YP_006297367.1 CDS Q7A_2945 NC_017857.1 2984013 2984726 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor 2984013..2984726 Methylophaga nitratireducenticrescens 12845341 YP_006297368.1 CDS Q7A_2946 NC_017857.1 2984755 2985132 D PFAM: Response regulator receiver domain; chemotaxis regulator 2984755..2985132 Methylophaga nitratireducenticrescens 12845342 YP_006297369.1 CDS Q7A_2947 NC_017857.1 2985151 2985894 D PFAM: Chemotaxis phosphatase, CheZ; chemotaxis response - phosphatase CheZ 2985151..2985894 Methylophaga nitratireducenticrescens 12845343 YP_006297370.1 CDS Q7A_2948 NC_017857.1 2985907 2987892 D PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 2985907..2987892 Methylophaga nitratireducenticrescens 12845344 YP_006297371.1 CDS Q7A_2949 NC_017857.1 2987901 2988938 D PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator protein-glutamate methylesterase CheB 2987901..2988938 Methylophaga nitratireducenticrescens 12845345 YP_006297372.1 CDS Q7A_2950 NC_017857.1 2988942 2989682 D PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 2988942..2989682 Methylophaga nitratireducenticrescens 12845346 YP_006297373.1 CDS Q7A_2951 NC_017857.1 2989687 2990598 D PFAM: OmpA family; flagellar motor rotation protein MotB 2989687..2990598 Methylophaga nitratireducenticrescens 12845347 YP_006297374.1 CDS Q7A_2952 NC_017857.1 2990595 2991392 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj 2990595..2991392 Methylophaga nitratireducenticrescens 12845348 YP_006297375.1 CDS Q7A_2953 NC_017857.1 2991385 2991966 D PFAM: CheW-like domain; cheW-like protein 2991385..2991966 Methylophaga nitratireducenticrescens 12845349 YP_006297376.1 CDS Q7A_2954 NC_017857.1 2992065 2992544 D PFAM: CheW-like domain; Positive regulator of CheA protein activity (CheW) 2992065..2992544 Methylophaga nitratireducenticrescens 12845350 YP_006297377.1 CDS Q7A_2955 NC_017857.1 2992551 2992733 D hypothetical protein 2992551..2992733 Methylophaga nitratireducenticrescens 12845351 YP_006297378.1 CDS Q7A_2956 NC_017857.1 2992752 2993138 D PFAM: Protein of unknown function (DUF2802); hypothetical protein 2992752..2993138 Methylophaga nitratireducenticrescens 12845352 YP_006297379.1 CDS Q7A_2959 NC_017857.1 2995195 2995473 R PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; flagellar protein FhlB cytoplasmic domain-containing protein complement(2995195..2995473) Methylophaga nitratireducenticrescens 12845354 YP_006297380.1 CDS Q7A_2960 NC_017857.1 2995470 2997053 R PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK complement(2995470..2997053) Methylophaga nitratireducenticrescens 12845355 YP_006297381.1 CDS Q7A_2961 NC_017857.1 2997186 2997962 D PFAM: Pentapeptide repeats (8 copies); hypothetical protein 2997186..2997962 Methylophaga nitratireducenticrescens 12845356 YP_006297382.1 CDS Q7A_2962 NC_017857.1 2997972 2998352 R PFAM: Protein of unknown function (DUF525); ApaG protein complement(2997972..2998352) Methylophaga nitratireducenticrescens 12845357 YP_006297383.1 CDS Q7A_2963 NC_017857.1 2998342 2999322 R PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase complement(2998342..2999322) Methylophaga nitratireducenticrescens 12845358 YP_006297384.1 CDS Q7A_2964 NC_017857.1 2999327 3000034 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(2999327..3000034) Methylophaga nitratireducenticrescens 12845359 YP_006297385.1 CDS Q7A_2965 NC_017857.1 3000175 3000885 D PFAM: Protein of unknown function (DUF541); periplasmic/secreted protein 3000175..3000885 Methylophaga nitratireducenticrescens 12845360 YP_006297386.1 CDS Q7A_2966 NC_017857.1 3000886 3002400 R PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase biosynthetic complement(3000886..3002400) Methylophaga nitratireducenticrescens 12845361 YP_006297387.1 CDS Q7A_2967 NC_017857.1 3002517 3003179 D PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 3002517..3003179 Methylophaga nitratireducenticrescens 12845362 YP_006297388.1 CDS Q7A_2968 NC_017857.1 3003308 3004474 D PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system transmembrane protein LolC 3003308..3004474 Methylophaga nitratireducenticrescens 12845363 YP_006297389.1 CDS Q7A_2969 NC_017857.1 3004467 3005147 D PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; lipoprotein releasing system ATP-binding protein LolD 3004467..3005147 Methylophaga nitratireducenticrescens 12845364 YP_006297390.1 CDS Q7A_2970 NC_017857.1 3005149 3005658 R PFAM: Uncharacterized protein conserved in bacteria (DUF2062); hypothetical protein complement(3005149..3005658) Methylophaga nitratireducenticrescens 12845365 YP_006297391.1 CDS Q7A_2971 NC_017857.1 3005730 3007997 D PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; the metallo-beta-lactamase-like hydrolase 3005730..3007997 Methylophaga nitratireducenticrescens 12845366 YP_006297392.1 CDS Q7A_2972 NC_017857.1 3008049 3008684 D PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 3008049..3008684 Methylophaga nitratireducenticrescens 12845367 YP_006297393.1 CDS Q7A_2973 NC_017857.1 3008681 3009106 D PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3008681..3009106 Methylophaga nitratireducenticrescens 12845368 YP_006297394.1 CDS Q7A_2974 NC_017857.1 3009103 3010857 D PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; lipid A export ATP-binding/permease MsbA 3009103..3010857 Methylophaga nitratireducenticrescens 12845369 YP_006297395.1 CDS Q7A_2975 NC_017857.1 3010857 3011837 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 3010857..3011837 Methylophaga nitratireducenticrescens 12845370 YP_006297396.1 CDS Q7A_2976 NC_017857.1 3011838 3012017 D PFAM: Trm112p-like protein; hypothetical protein 3011838..3012017 Methylophaga nitratireducenticrescens 12845371 YP_006297397.1 CDS Q7A_2977 NC_017857.1 3012017 3012781 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 3012017..3012781 Methylophaga nitratireducenticrescens 12845372 YP_006297398.1 CDS Q7A_2978 NC_017857.1 3012749 3013009 R hypothetical protein complement(3012749..3013009) Methylophaga nitratireducenticrescens 12845373 YP_006297399.1 CDS Q7A_2979 NC_017857.1 3013026 3015443 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease E complement(3013026..3015443) Methylophaga nitratireducenticrescens 12845374 YP_006297400.1 CDS Q7A_2980 NC_017857.1 3015987 3016943 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase C 3015987..3016943 Methylophaga nitratireducenticrescens 12845375 YP_006297401.1 CDS Q7A_2981 NC_017857.1 3016943 3017605 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphoglycolate phosphatase 3016943..3017605 Methylophaga nitratireducenticrescens 12845376 YP_006297402.1 CDS Q7A_2982 NC_017857.1 3017649 3018632 D PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; periplasmic serine proteases (ClpP class) 3017649..3018632 Methylophaga nitratireducenticrescens 12845377 YP_006297403.1 CDS Q7A_2983 NC_017857.1 3018632 3018793 D hypothetical protein 3018632..3018793 Methylophaga nitratireducenticrescens 12845378 YP_006297404.1 CDS Q7A_2984 NC_017857.1 3018784 3019623 D PFAM: HDOD domain; hypothetical protein 3018784..3019623 Methylophaga nitratireducenticrescens 12845379 YP_006297405.1 CDS Q7A_2985 NC_017857.1 3019665 3020312 D PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 3019665..3020312 Methylophaga nitratireducenticrescens 12845380 YP_006297406.1 CDS Q7A_2986 NC_017857.1 3020325 3021179 D PFAM: pfkB family carbohydrate kinase; Ketohexokinase 3020325..3021179 Methylophaga nitratireducenticrescens 12845381 YP_006297407.1 CDS Q7A_2987 NC_017857.1 3021182 3021529 D PFAM: Rieske [2Fe-2S] domain; ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase 3021182..3021529 Methylophaga nitratireducenticrescens 12845382 YP_006297408.1 CDS Q7A_2988 NC_017857.1 3021518 3023518 R PFAM: Putative ATPase (DUF699); Domain of unknown function (DUF1726); bifunctional P-loop ATPase/acetyltransferase complement(3021518..3023518) Methylophaga nitratireducenticrescens 12845383 YP_006297409.1 CDS Q7A_2989 NC_017857.1 3023564 3023767 R PFAM: SlyX; hypothetical protein complement(3023564..3023767) Methylophaga nitratireducenticrescens 12845384 YP_006297410.1 CDS Q7A_2990 NC_017857.1 3023840 3027538 R PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(3023840..3027538) Methylophaga nitratireducenticrescens 12845385 YP_006297411.1 CDS Q7A_2991 NC_017857.1 3027749 3028498 R PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit complement(3027749..3028498) Methylophaga nitratireducenticrescens 12845386 YP_006297412.1 CDS Q7A_2992 NC_017857.1 3028501 3029841 R PFAM: NfeD-like; membrane-bound ClpP-class protease complement(3028501..3029841) Methylophaga nitratireducenticrescens 12845387 YP_006297413.1 CDS Q7A_2993 NC_017857.1 3030027 3030227 D hypothetical protein 3030027..3030227 Methylophaga nitratireducenticrescens 12845388 YP_006297414.1 CDS Q7A_2994 NC_017857.1 3030343 3031350 D PFAM: Cytochrome P450; fatty acid alpha hydroxylase, cytochrome P450 3030343..3031350 Methylophaga nitratireducenticrescens 12845389 YP_006297415.1 CDS Q7A_2995 NC_017857.1 3031355 3031918 R hypothetical protein complement(3031355..3031918) Methylophaga nitratireducenticrescens 12845390 YP_006297416.1 CDS Q7A_2996 NC_017857.1 3032220 3032438 D hypothetical protein 3032220..3032438 Methylophaga nitratireducenticrescens 12845391 YP_006297417.1 CDS Q7A_2997 NC_017857.1 3032645 3033127 R PFAM: Domain of unknown function (DUF2383); hypothetical protein complement(3032645..3033127) Methylophaga nitratireducenticrescens 12845392 YP_006297418.1 CDS Q7A_2998 NC_017857.1 3033232 3033507 R PFAM: Domain of Unknown Function (DUF326); Ferredoxin complement(3033232..3033507) Methylophaga nitratireducenticrescens 12845393 YP_006297419.1 CDS Q7A_2999 NC_017857.1 3033531 3033956 R PFAM: CBS domain; inosine-5'-monophosphate dehydrogenase protein complement(3033531..3033956) Methylophaga nitratireducenticrescens 12845394 YP_006297420.1 CDS Q7A_3000 NC_017857.1 3034215 3034343 R hypothetical protein complement(3034215..3034343) Methylophaga nitratireducenticrescens 12845395 YP_006297421.1 CDS Q7A_3001 NC_017857.1 3034331 3035227 D PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 3034331..3035227 Methylophaga nitratireducenticrescens 12845396 YP_006297422.1 CDS Q7A_3002 NC_017857.1 3035218 3037326 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(3035218..3037326) Methylophaga nitratireducenticrescens 12845397 YP_006297423.1 CDS Q7A_3003 NC_017857.1 3037434 3037583 D hypothetical protein 3037434..3037583 Methylophaga nitratireducenticrescens 12845398 YP_006297424.1 CDS Q7A_3004 NC_017857.1 3037602 3038072 R PFAM: Late embryogenesis abundant protein; lipoprotein complement(3037602..3038072) Methylophaga nitratireducenticrescens 12845399 YP_006297425.1 CDS Q7A_3005 NC_017857.1 3038215 3038481 R hypothetical protein complement(3038215..3038481) Methylophaga nitratireducenticrescens 12845400 YP_006297426.1 CDS Q7A_3006 NC_017857.1 3038480 3038599 D hypothetical protein 3038480..3038599 Methylophaga nitratireducenticrescens 12845401 YP_006297427.1 CDS Q7A_3007 NC_017857.1 3038706 3040382 R PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type; 2-isopropylmalate synthase complement(3038706..3040382) Methylophaga nitratireducenticrescens 12845402 YP_006297428.1 CDS Q7A_3008 NC_017857.1 3040715 3041185 D PFAM: MarR family; AsnC family; transcriptional regulator 3040715..3041185 Methylophaga nitratireducenticrescens 12845403 YP_006297429.1 CDS Q7A_3009 NC_017857.1 3041209 3042081 R PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; polyphosphate:nucleotide phosphotransferase complement(3041209..3042081) Methylophaga nitratireducenticrescens 12845404 YP_006297430.1 CDS Q7A_3010 NC_017857.1 3042173 3043186 R PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; methyltransferase complement(3042173..3043186) Methylophaga nitratireducenticrescens 12845405 YP_006297431.1 CDS Q7A_3011 NC_017857.1 3043186 3043320 R hypothetical protein complement(3043186..3043320) Methylophaga nitratireducenticrescens 12845406 YP_006297432.1 CDS Q7A_3012 NC_017857.1 3043360 3044496 R PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein; hypothetical protein complement(3043360..3044496) Methylophaga nitratireducenticrescens 12845407 YP_006297433.1 CDS Q7A_3013 NC_017857.1 3044938 3045660 R divalent heavy-metal cations transporter complement(3044938..3045660) Methylophaga nitratireducenticrescens 12845408 YP_006297434.1 CDS Q7A_3014 NC_017857.1 3045885 3046832 D streptogramin lyase 3045885..3046832 Methylophaga nitratireducenticrescens 12845409 YP_006297435.1 CDS Q7A_3015 NC_017857.1 3046913 3047512 R PFAM: Exopolysaccharide synthesis, ExoD; ABC transporter permease complement(3046913..3047512) Methylophaga nitratireducenticrescens 12845410 YP_006297436.1 CDS Q7A_3016 NC_017857.1 3047527 3048480 R PFAM: Sodium Bile acid symporter family; arsenical-resistance protein ACR3 complement(3047527..3048480) Methylophaga nitratireducenticrescens 12845411 YP_006297437.1 CDS Q7A_3017 NC_017857.1 3048692 3048949 D hypothetical protein 3048692..3048949 Methylophaga nitratireducenticrescens 12845412 YP_006297438.1 CDS Q7A_3018 NC_017857.1 3048984 3049871 R PFAM: Mechanosensitive ion channel; hypothetical protein complement(3048984..3049871) Methylophaga nitratireducenticrescens 12845413 YP_006297439.1 CDS Q7A_3019 NC_017857.1 3050481 3051890 D PFAM: PhoH-like protein; ATPase related to phosphate starvation-inducible protein PhoH 3050481..3051890 Methylophaga nitratireducenticrescens 12845414 YP_006297440.1 CDS Q7A_3020 NC_017857.1 3051999 3052625 D PFAM: PilZ domain; PilZ domain-containing protein 3051999..3052625 Methylophaga nitratireducenticrescens 12845415 YP_006297441.1 CDS Q7A_3021 NC_017857.1 3052763 3053371 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase 3052763..3053371 Methylophaga nitratireducenticrescens 12845416 YP_006297442.1 CDS Q7A_3022 NC_017857.1 3053375 3054031 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthetase complement(3053375..3054031) Methylophaga nitratireducenticrescens 12845417 YP_006297443.1 CDS Q7A_3023 NC_017857.1 3054031 3054930 R PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; Biotin synthesis protein bioC complement(3054031..3054930) Methylophaga nitratireducenticrescens 12845418 YP_006297444.1 CDS Q7A_3024 NC_017857.1 3054923 3055681 R TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH; Biotin synthesis protein bioH complement(3054923..3055681) Methylophaga nitratireducenticrescens 12845419 YP_006297445.1 CDS Q7A_3025 NC_017857.1 3055671 3056843 R PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(3055671..3056843) Methylophaga nitratireducenticrescens 12845420 YP_006297446.1 CDS Q7A_3026 NC_017857.1 3056953 3057966 R PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase; biotin synthase complement(3056953..3057966) Methylophaga nitratireducenticrescens 12845421 YP_006297447.1 CDS Q7A_3027 NC_017857.1 3058000 3058725 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; Competence protein F-like protein 3058000..3058725 Methylophaga nitratireducenticrescens 12845422 YP_006297448.1 CDS Q7A_3028 NC_017857.1 3058763 3059836 D PFAM: Protein of unknown function, DUF484; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 3058763..3059836 Methylophaga nitratireducenticrescens 12845423 YP_006297449.1 CDS Q7A_3029 NC_017857.1 3059886 3061376 D PFAM: Protein of unknown function (DUF1538); hypothetical protein 3059886..3061376 Methylophaga nitratireducenticrescens 12845424 YP_006297450.1 CDS Q7A_3030 NC_017857.1 3061373 3061723 D nitrogen regulatory protein P-II 3061373..3061723 Methylophaga nitratireducenticrescens 12845425 YP_006297451.1 CDS Q7A_3031 NC_017857.1 3061742 3062131 D PFAM: CBS domain; signal-transduction protein 3061742..3062131 Methylophaga nitratireducenticrescens 12845426 YP_006297452.1 CDS Q7A_3032 NC_017857.1 3062135 3062968 R PFAM: Staphylococcal nuclease homologue; nuclease SNase-like protein complement(3062135..3062968) Methylophaga nitratireducenticrescens 12845427 YP_006297453.1 CDS Q7A_3033 NC_017857.1 3062970 3063836 R PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; 4-hydroxybenzoate polyprenyltransferase complement(3062970..3063836) Methylophaga nitratireducenticrescens 12845428 YP_006297454.1 CDS Q7A_3034 NC_017857.1 3063836 3064387 R PFAM: Chorismate lyase; chorismate--pyruvate lyase complement(3063836..3064387) Methylophaga nitratireducenticrescens 12845429 YP_006297455.1 CDS Q7A_3035 NC_017857.1 3064401 3066482 R PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG complement(3064401..3066482) Methylophaga nitratireducenticrescens 12845430 YP_006297456.1 CDS Q7A_3036 NC_017857.1 3066509 3066895 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP complement(3066509..3066895) Methylophaga nitratireducenticrescens 12845431 YP_006297457.1 CDS Q7A_3037 NC_017857.1 3066940 3069099 R PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(3066940..3069099) Methylophaga nitratireducenticrescens 12845432 YP_006297458.1 CDS Q7A_3038 NC_017857.1 3069106 3069366 R PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(3069106..3069366) Methylophaga nitratireducenticrescens 12845433 YP_006297459.1 CDS Q7A_3039 NC_017857.1 3069417 3070028 R PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase complement(3069417..3070028) Methylophaga nitratireducenticrescens 12845434 YP_006297460.1 CDS Q7A_3040 NC_017857.1 3070268 3071308 D PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein 3070268..3071308 Methylophaga nitratireducenticrescens 12845435 YP_006297461.1 CDS Q7A_3041 NC_017857.1 3071433 3073025 D PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein 3071433..3073025 Methylophaga nitratireducenticrescens 12845436 YP_006297462.1 CDS Q7A_3042 NC_017857.1 3073033 3074085 D PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein 3073033..3074085 Methylophaga nitratireducenticrescens 12845437 YP_006297463.1 CDS Q7A_3043 NC_017857.1 3074294 3074839 D hypothetical protein 3074294..3074839 Methylophaga nitratireducenticrescens 12845438 YP_006297464.1 CDS Q7A_3044 NC_017857.1 3074971 3075111 D hypothetical protein 3074971..3075111 Methylophaga nitratireducenticrescens 12845439 YP_006297465.1 CDS Q7A_3045 NC_017857.1 3075477 3077867 R PFAM: Eukaryotic and archaeal DNA primase small subunit; Type III restriction enzyme, res subunit; helicase complement(3075477..3077867) Methylophaga nitratireducenticrescens 12845440 YP_006297466.1 CDS Q7A_3046 NC_017857.1 3077967 3078197 R hypothetical protein complement(3077967..3078197) Methylophaga nitratireducenticrescens 12845441 YP_006297467.1 CDS Q7A_3047 NC_017857.1 3078561 3078695 D hypothetical protein 3078561..3078695 Methylophaga nitratireducenticrescens 12845442 YP_006297468.1 CDS Q7A_3050 NC_017857.1 3080041 3080181 D hypothetical protein 3080041..3080181 Methylophaga nitratireducenticrescens 12845444 YP_006297469.1 CDS Q7A_3051 NC_017857.1 3080194 3081198 D PFAM: SEC-C motif; hypothetical protein 3080194..3081198 Methylophaga nitratireducenticrescens 12845445 YP_006297470.1 CDS Q7A_3052 NC_017857.1 3081371 3082327 D hypothetical protein 3081371..3082327 Methylophaga nitratireducenticrescens 12845446 YP_006297471.1 CDS Q7A_3053 NC_017857.1 3082476 3083789 R ATPase (AAA+ superfamily) complement(3082476..3083789) Methylophaga nitratireducenticrescens 12845447 YP_006297472.1 CDS Q7A_3054 NC_017857.1 3084003 3084227 R transcriptional regulator complement(3084003..3084227) Methylophaga nitratireducenticrescens 12845448 YP_006297473.1 CDS Q7A_3055 NC_017857.1 3084281 3084574 R PFAM: Transposase DDE domain; IS4 family transposase complement(3084281..3084574) Methylophaga nitratireducenticrescens 12845449 YP_006297474.1 CDS Q7A_3056 NC_017857.1 3084571 3085044 R transposase complement(3084571..3085044) Methylophaga nitratireducenticrescens 12845450 YP_006297475.1 CDS Q7A_3057 NC_017857.1 3085438 3086289 R PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; protein YicC complement(3085438..3086289) Methylophaga nitratireducenticrescens 12845451 YP_006297476.1 CDS Q7A_3058 NC_017857.1 3086417 3087133 D PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; ribonuclease PH 3086417..3087133 Methylophaga nitratireducenticrescens 12845452 YP_006297477.1 CDS Q7A_3059 NC_017857.1 3087133 3087738 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; nucleoside 5-triphosphatase RdgB 3087133..3087738 Methylophaga nitratireducenticrescens 12845453 YP_006297478.1 CDS Q7A_3060 NC_017857.1 3087846 3089006 D PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase-like protein 3087846..3089006 Methylophaga nitratireducenticrescens 12845454 YP_006297479.1 CDS Q7A_3061 NC_017857.1 3089041 3089337 D hypothetical protein 3089041..3089337 Methylophaga nitratireducenticrescens 12845455 YP_006297480.1 CDS Q7A_3062 NC_017857.1 3089352 3089852 R hypothetical protein complement(3089352..3089852) Methylophaga nitratireducenticrescens 12845456 YP_006297481.1 CDS Q7A_3063 NC_017857.1 3089855 3091000 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase complement(3089855..3091000) Methylophaga nitratireducenticrescens 12845457 YP_006297482.1 CDS Q7A_3064 NC_017857.1 3091036 3092346 R PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain; Homoserine dehydrogenase complement(3091036..3092346) Methylophaga nitratireducenticrescens 12845458 YP_006297483.1 CDS Q7A_3065 NC_017857.1 3092356 3093471 R PFAM: Aminotransferase class I and II; Aspartate aminotransferase complement(3092356..3093471) Methylophaga nitratireducenticrescens 12845459 YP_006297484.1 CDS Q7A_3066 NC_017857.1 3093495 3093614 D hypothetical protein 3093495..3093614 Methylophaga nitratireducenticrescens 12845460 YP_006297485.1 CDS Q7A_3067 NC_017857.1 3093629 3094471 D PFAM: HDOD domain; signal transduction protein 3093629..3094471 Methylophaga nitratireducenticrescens 12845461 YP_006297486.1 CDS Q7A_3068 NC_017857.1 3094546 3094860 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated DNA-protein cysteine methyltransferase complement(3094546..3094860) Methylophaga nitratireducenticrescens 12845462 YP_006297487.1 CDS Q7A_3069 NC_017857.1 3094953 3095789 R PFAM: Protein of unknown function (DUF519); hypothetical protein complement(3094953..3095789) Methylophaga nitratireducenticrescens 12845463 YP_006297488.1 CDS Q7A_3070 NC_017857.1 3096022 3097125 R PFAM: NADH:flavin oxidoreductase / NADH oxidase family; xenobiotic reductase A complement(3096022..3097125) Methylophaga nitratireducenticrescens 12845464 YP_006297489.1 CDS Q7A_3071 NC_017857.1 3097205 3097996 R PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(3097205..3097996) Methylophaga nitratireducenticrescens 12845465 YP_006297490.1 CDS Q7A_3072 NC_017857.1 3098045 3098845 R PFAM: AhpC/TSA family; thioredoxin complement(3098045..3098845) Methylophaga nitratireducenticrescens 12845466 YP_006297491.1 CDS Q7A_3073 NC_017857.1 3098845 3099606 R thiol:disulfide interchange protein DsbG precursor complement(3098845..3099606) Methylophaga nitratireducenticrescens 12845467 YP_006297492.1 CDS Q7A_3074 NC_017857.1 3099808 3100998 D PFAM: Protein of unknown function (DUF1228); Major Facilitator Superfamily; transporter 3099808..3100998 Methylophaga nitratireducenticrescens 12845468 YP_006297493.1 CDS Q7A_3075 NC_017857.1 3101035 3101364 R hypothetical protein complement(3101035..3101364) Methylophaga nitratireducenticrescens 12845469 YP_006297494.1 CDS Q7A_3076 NC_017857.1 3101403 3102152 R hypothetical protein complement(3101403..3102152) Methylophaga nitratireducenticrescens 12845470 YP_006297495.1 CDS Q7A_3077 NC_017857.1 3102560 3102688 D hypothetical protein 3102560..3102688 Methylophaga nitratireducenticrescens 12845471 YP_006297496.1 CDS Q7A_3078 NC_017857.1 3102824 3103189 R hypothetical protein complement(3102824..3103189) Methylophaga nitratireducenticrescens 12845472 YP_006297497.1 CDS Q7A_3079 NC_017857.1 3103315 3104511 R PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; NAD(FAD)-utilizing dehydrogenase complement(3103315..3104511) Methylophaga nitratireducenticrescens 12845473 YP_006297498.1 CDS Q7A_3080 NC_017857.1 3104581 3105243 R toluene tolerance protein Ttg8 complement(3104581..3105243) Methylophaga nitratireducenticrescens 12845474 YP_006297499.1 CDS Q7A_3081 NC_017857.1 3105397 3105960 R PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; Farnesyl cysteine carboxyl-methyltransferase complement(3105397..3105960) Methylophaga nitratireducenticrescens 12845475 YP_006297500.1 CDS Q7A_3082 NC_017857.1 3106225 3106347 R hypothetical protein complement(3106225..3106347) Methylophaga nitratireducenticrescens 12845476 YP_006297501.1 CDS Q7A_3083 NC_017857.1 3106394 3106747 D PFAM: NlpC/P60 family; lipoprotein 3106394..3106747 Methylophaga nitratireducenticrescens 12845477 YP_006297502.1 CDS Q7A_3084 NC_017857.1 3106899 3107843 D hypothetical protein 3106899..3107843 Methylophaga nitratireducenticrescens 12845478 YP_006297503.1 CDS Q7A_3085 NC_017857.1 3107949 3110003 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Erythromycin esterase; TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(3107949..3110003) Methylophaga nitratireducenticrescens 12845479 YP_006297504.1 CDS Q7A_3086 NC_017857.1 3110533 3110832 D PFAM: Protein of unknown function (DUF3617); hypothetical protein 3110533..3110832 Methylophaga nitratireducenticrescens 12845480 YP_006297505.1 CDS Q7A_3087 NC_017857.1 3110889 3111314 D PFAM: MAPEG family; hypothetical protein 3110889..3111314 Methylophaga nitratireducenticrescens 12845481 YP_006297506.1 CDS Q7A_3088 NC_017857.1 3111319 3111855 D PFAM: Bacterial transferase hexapeptide (three repeats); carbonic anhydrase 3111319..3111855 Methylophaga nitratireducenticrescens 12845482 YP_006297507.1 CDS Q7A_3089 NC_017857.1 3111852 3112697 R PFAM: HDOD domain; hypothetical protein complement(3111852..3112697) Methylophaga nitratireducenticrescens 12845483 YP_006297508.1 CDS Q7A_3090 NC_017857.1 3113121 3114332 D PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein 3113121..3114332 Methylophaga nitratireducenticrescens 12845484 YP_006297509.1 CDS Q7A_3091 NC_017857.1 3114367 3114660 R PFAM: Transposase DDE domain; transposase complement(3114367..3114660) Methylophaga nitratireducenticrescens 12845485 YP_006297510.1 CDS Q7A_3092 NC_017857.1 3114657 3115130 R transposase complement(3114657..3115130) Methylophaga nitratireducenticrescens 12845486 YP_006297511.1 CDS Q7A_3093 NC_017857.1 3115228 3115989 R PFAM: ABC-2 type transporter; multidrug ABC transporter permease complement(3115228..3115989) Methylophaga nitratireducenticrescens 12845487 YP_006297512.1 CDS Q7A_3094 NC_017857.1 3115986 3116915 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(3115986..3116915) Methylophaga nitratireducenticrescens 12845488 YP_006297513.1 CDS Q7A_3095 NC_017857.1 3117107 3117907 R hypothetical protein complement(3117107..3117907) Methylophaga nitratireducenticrescens 12845489 YP_006297514.1 CDS Q7A_3096 NC_017857.1 3118090 3118458 R hypothetical protein complement(3118090..3118458) Methylophaga nitratireducenticrescens 12845490 YP_006297515.1 CDS Q7A_3097 NC_017857.1 3118533 3119417 D PFAM: Transposase DDE domain; transposase, IS982 family 3118533..3119417 Methylophaga nitratireducenticrescens 12845491 YP_006297516.1 CDS Q7A_3098 NC_017857.1 3119746 3120054 R PFAM: Protein of unknown function (DUF3144); hypothetical protein complement(3119746..3120054) Methylophaga nitratireducenticrescens 12845492 YP_006297517.1 CDS Q7A_3099 NC_017857.1 3120051 3120173 R hypothetical protein complement(3120051..3120173) Methylophaga nitratireducenticrescens 12845493 YP_006297518.1 CDS Q7A_3100 NC_017857.1 3120301 3121530 D PFAM: Amino acid permease; amino acid transporter 3120301..3121530 Methylophaga nitratireducenticrescens 12845494 YP_006297519.1 CDS Q7A_3101 NC_017857.1 3121648 3122418 D PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; transcriptional regulator 3121648..3122418 Methylophaga nitratireducenticrescens 12845495 YP_006297520.1 CDS Q7A_3105 NC_017857.1 3123477 3124739 R PFAM: Phosphotransferase enzyme family; homoserine kinase type II complement(3123477..3124739) Methylophaga nitratireducenticrescens 12845497 YP_006297521.1 CDS Q7A_3106 NC_017857.1 3124944 3125843 D PFAM: Transposase DDE domain; transposase, IS982 family 3124944..3125843 Methylophaga nitratireducenticrescens 12845498 YP_006297522.1 CDS Q7A_3107 NC_017857.1 3125851 3126543 R PFAM: Integrase core domain; integrase, catalytic region complement(3125851..3126543) Methylophaga nitratireducenticrescens 12845499 YP_006297523.1 CDS Q7A_3108 NC_017857.1 3126549 3126938 R PFAM: Transposase; transposase IS3/IS911 complement(3126549..3126938) Methylophaga nitratireducenticrescens 12845500 YP_006297524.1 CDS Q7A_3109 NC_017857.1 3127658 3128971 D PFAM: Peptidase family U32; protease 3127658..3128971 Methylophaga nitratireducenticrescens 12845501 YP_006297525.1 CDS Q7A_3110 NC_017857.1 3128997 3129290 R PFAM: Transposase DDE domain; IS4 family transposase complement(3128997..3129290) Methylophaga nitratireducenticrescens 12845502 YP_006297526.1 CDS Q7A_3111 NC_017857.1 3129287 3129760 R transposase complement(3129287..3129760) Methylophaga nitratireducenticrescens 12845503 YP_006297527.1 CDS Q7A_3112 NC_017857.1 3129930 3130115 R hypothetical protein complement(3129930..3130115) Methylophaga nitratireducenticrescens 12845504 YP_006297528.1 CDS Q7A_3113 NC_017857.1 3130397 3130540 R hypothetical protein complement(3130397..3130540) Methylophaga nitratireducenticrescens 12845505 YP_006297529.1 CDS Q7A_3114 NC_017857.1 3131162 3131299 R hypothetical protein complement(3131162..3131299) Methylophaga nitratireducenticrescens 12845506 Q7A_1 tRNA Q7A_1 NC_017857.1 96 168 R tRNA-Lys complement(96..168) Methylophaga nitratireducenticrescens 12846686 Q7A_264 tRNA Q7A_264 NC_017857.1 274799 274872 R tRNA-Asp complement(274799..274872) Methylophaga nitratireducenticrescens 12846967 Q7A_344 tRNA Q7A_344 NC_017857.1 349690 349763 D tRNA-Met 349690..349763 Methylophaga nitratireducenticrescens 12847047 Q7A_491 tRNA Q7A_491 NC_017857.1 503555 503638 R tRNA-Leu complement(503555..503638) Methylophaga nitratireducenticrescens 12847189 Q7A_504 tRNA Q7A_504 NC_017857.1 516304 516375 D tRNA-Gln 516304..516375 Methylophaga nitratireducenticrescens 12845530 Q7A_510 tRNA Q7A_510 NC_017857.1 521192 521265 D tRNA-Met 521192..521265 Methylophaga nitratireducenticrescens 12845536 Q7A_740 tRNA Q7A_740 NC_017857.1 752892 752965 R tRNA-Arg complement(752892..752965) Methylophaga nitratireducenticrescens 12845930 Q7A_836 tRNA Q7A_836 NC_017857.1 848827 848900 D tRNA-Arg 848827..848900 Methylophaga nitratireducenticrescens 12846190 Q7A_1077 tRNA Q7A_1077 NC_017857.1 1090977 1091050 D tRNA-Pro 1090977..1091050 Methylophaga nitratireducenticrescens 12847234 Q7A_1078 tRNA Q7A_1078 NC_017857.1 1091093 1091166 D tRNA-Arg 1091093..1091166 Methylophaga nitratireducenticrescens 12847235 Q7A_1255 tRNA Q7A_1255 NC_017857.1 1256912 1256999 R tRNA-Ser complement(1256912..1256999) Methylophaga nitratireducenticrescens 12847411 Q7A_1294 tRNA Q7A_1294 NC_017857.1 1291939 1292012 D tRNA-Met 1291939..1292012 Methylophaga nitratireducenticrescens 12847449 Q7A_1458 tRNA Q7A_1458 NC_017857.1 1470807 1470879 R tRNA-Asn complement(1470807..1470879) Methylophaga nitratireducenticrescens 12847611 Q7A_1462 tRNA Q7A_1462 NC_017857.1 1475148 1475221 D tRNA-Val 1475148..1475221 Methylophaga nitratireducenticrescens 12847615 Q7A_1471 tRNA Q7A_1471 NC_017857.1 1482596 1482669 D tRNA-Pro 1482596..1482669 Methylophaga nitratireducenticrescens 12847624 Q7A_1495 tRNA Q7A_1495 NC_017857.1 1504138 1504219 R tRNA-Leu complement(1504138..1504219) Methylophaga nitratireducenticrescens 12847648 Q7A_1659 tRNA Q7A_1659 NC_017857.1 1679461 1679534 R tRNA-Arg complement(1679461..1679534) Methylophaga nitratireducenticrescens 12847811 Q7A_1660 tRNA Q7A_1660 NC_017857.1 1679598 1679684 R tRNA-Ser complement(1679598..1679684) Methylophaga nitratireducenticrescens 12847812 Q7A_1884 tRNA Q7A_1884 NC_017857.1 1923142 1923229 R tRNA-Ser complement(1923142..1923229) Methylophaga nitratireducenticrescens 12848034 Q7A_2027 tRNA Q7A_2027 NC_017857.1 2085240 2085321 R tRNA-Leu complement(2085240..2085321) Methylophaga nitratireducenticrescens 12845608 Q7A_2210 tRNA Q7A_2210 NC_017857.1 2274631 2274704 R tRNA-Asp complement(2274631..2274704) Methylophaga nitratireducenticrescens 12845956 Q7A_2211 tRNA Q7A_2211 NC_017857.1 2274717 2274789 R tRNA-Val complement(2274717..2274789) Methylophaga nitratireducenticrescens 12845957 Q7A_2217 tRNA Q7A_2217 NC_017857.1 2281012 2281084 D tRNA-Ala 2281012..2281084 Methylophaga nitratireducenticrescens 12845963 Q7A_2218 tRNA Q7A_2218 NC_017857.1 2281112 2281184 D tRNA-Glu 2281112..2281184 Methylophaga nitratireducenticrescens 12845964 Q7A_2292 tRNA Q7A_2292 NC_017857.1 2362397 2362465 R tRNA-Ala complement(2362397..2362465) Methylophaga nitratireducenticrescens 12846101 Q7A_2293 tRNA Q7A_2293 NC_017857.1 2362552 2362624 R tRNA-Ala complement(2362552..2362624) Methylophaga nitratireducenticrescens 12846102 Q7A_2295 tRNA Q7A_2295 NC_017857.1 2362753 2362826 R tRNA-Ile complement(2362753..2362826) Methylophaga nitratireducenticrescens 12846104 Q7A_2336 tRNA Q7A_2336 NC_017857.1 2394515 2394587 R tRNA-Trp complement(2394515..2394587) Methylophaga nitratireducenticrescens 12846145 Q7A_2338 tRNA Q7A_2338 NC_017857.1 2395916 2395988 R tRNA-Thr complement(2395916..2395988) Methylophaga nitratireducenticrescens 12846147 Q7A_2339 tRNA Q7A_2339 NC_017857.1 2396011 2396081 R tRNA-Gly complement(2396011..2396081) Methylophaga nitratireducenticrescens 12846148 Q7A_2340 tRNA Q7A_2340 NC_017857.1 2396109 2396190 R tRNA-Tyr complement(2396109..2396190) Methylophaga nitratireducenticrescens 12846149 Q7A_2490 tRNA Q7A_2490 NC_017857.1 2549004 2549076 D tRNA-Phe 2549004..2549076 Methylophaga nitratireducenticrescens 12846361 Q7A_2541 tRNA Q7A_2541 NC_017857.1 2595646 2595714 R tRNA-Ala complement(2595646..2595714) Methylophaga nitratireducenticrescens 12846495 Q7A_2542 tRNA Q7A_2542 NC_017857.1 2595801 2595873 R tRNA-Ala complement(2595801..2595873) Methylophaga nitratireducenticrescens 12846496 Q7A_2544 tRNA Q7A_2544 NC_017857.1 2596002 2596075 R tRNA-Ile complement(2596002..2596075) Methylophaga nitratireducenticrescens 12846498 Q7A_2579 tRNA Q7A_2579 NC_017857.1 2630976 2631059 R tRNA-Leu complement(2630976..2631059) Methylophaga nitratireducenticrescens 12846533 Q7A_2581 tRNA Q7A_2581 NC_017857.1 2633370 2633442 D tRNA-His 2633370..2633442 Methylophaga nitratireducenticrescens 12846535 Q7A_2582 tRNA Q7A_2582 NC_017857.1 2633568 2633640 D tRNA-Thr 2633568..2633640 Methylophaga nitratireducenticrescens 12846536 Q7A_2638 tRNA Q7A_2638 NC_017857.1 2689369 2689439 R tRNA-Cys complement(2689369..2689439) Methylophaga nitratireducenticrescens 12846676 Q7A_2639 tRNA Q7A_2639 NC_017857.1 2689523 2689594 R tRNA-Gly complement(2689523..2689594) Methylophaga nitratireducenticrescens 12846677 Q7A_2892 tRNA Q7A_2892 NC_017857.1 2931194 2931275 R tRNA-Leu complement(2931194..2931275) Methylophaga nitratireducenticrescens 12845287 Q7A_3117 tRNA Q7A_3117 NC_017857.1 3135003 3135071 R tRNA-Ala complement(3135003..3135071) Methylophaga nitratireducenticrescens 12845509 Q7A_3118 tRNA Q7A_3118 NC_017857.1 3135158 3135230 R tRNA-Ala complement(3135158..3135230) Methylophaga nitratireducenticrescens 12845510 Q7A_3119 tRNA Q7A_3119 NC_017857.1 3135351 3135424 R tRNA-Ile complement(3135351..3135424) Methylophaga nitratireducenticrescens 12845511 Q7A_2290 rRNA Q7A_2290 NC_017857.1 2358728 2358846 R 5S ribosomal RNA complement(2358728..2358846) Methylophaga nitratireducenticrescens 12846099 Q7A_2291 rRNA Q7A_2291 NC_017857.1 2358921 2362176 R 23S ribosomal RNA complement(2358921..2362176) Methylophaga nitratireducenticrescens 12846100 Q7A_2296 rRNA Q7A_2296 NC_017857.1 2362913 2364402 R 16S ribosomal RNA complement(2362913..2364402) Methylophaga nitratireducenticrescens 12846105 Q7A_2539 rRNA Q7A_2539 NC_017857.1 2591977 2592095 R 5S ribosomal RNA complement(2591977..2592095) Methylophaga nitratireducenticrescens 12846493 Q7A_2540 rRNA Q7A_2540 NC_017857.1 2592170 2595425 R 23S ribosomal RNA complement(2592170..2595425) Methylophaga nitratireducenticrescens 12846494 Q7A_2545 rRNA Q7A_2545 NC_017857.1 2596162 2597651 R 16S ribosomal RNA complement(2596162..2597651) Methylophaga nitratireducenticrescens 12846499 Q7A_3115 rRNA Q7A_3115 NC_017857.1 3131371 3131490 R 5S ribosomal RNA complement(3131371..3131490) Methylophaga nitratireducenticrescens 12845507 Q7A_3116 rRNA Q7A_3116 NC_017857.1 3131565 3134801 R 23S ribosomal RNA complement(3131565..3134801) Methylophaga nitratireducenticrescens 12845508 Q7A_3120 rRNA Q7A_3120 NC_017857.1 3135511 3136997 R 16S ribosomal RNA complement(3135511..3136997) Methylophaga nitratireducenticrescens 12845512