-- dump date 20140619_145158 -- class Genbank::CDS -- table cds_note -- id note YP_006294508.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_006294509.1 PFAM: Radical SAM superfamily YP_006294510.1 PFAM: Tetratricopeptide repeat; TIGRFAM: tol-pal system protein YbgF YP_006294511.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein YP_006294512.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB YP_006294513.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain YP_006294514.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein YP_006294515.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein YP_006294516.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_006294517.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_006294518.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_006294519.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_006294520.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_006294521.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_006294522.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase YP_006294524.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_006294525.1 PFAM: Chaperonin 10 Kd subunit YP_006294526.1 PFAM: FxsA cytoplasmic membrane protein YP_006294527.1 PFAM: Phosphate-selective porin O and P YP_006294528.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006294529.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin) YP_006294530.1 SH3 domain YP_006294531.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006294533.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006294534.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006294535.1 PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase YP_006294536.1 PFAM: NUDIX domain YP_006294537.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_006294538.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_006294539.1 PFAM: FIST C domain; FIST N domain YP_006294540.1 PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family YP_006294542.1 PFAM: Response regulator receiver domain YP_006294543.1 PFAM: Response regulator receiver domain YP_006294544.1 PFAM: CheW-like domain YP_006294545.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006294546.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_006294547.1 PFAM: CheW-like domain YP_006294548.1 PFAM: Transglycosylase SLT domain YP_006294549.1 PFAM: HD domain; Poly A polymerase head domain YP_006294550.1 PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase YP_006294551.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family YP_006294552.1 PFAM: ATP:dephospho-CoA triphosphoribosyl transferase YP_006294553.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme YP_006294554.1 PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein YP_006294556.1 PFAM: ATP-grasp domain YP_006294557.1 TIGRFAM: probable H4MPT-linked C1 transfer pathway protein YP_006294558.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; aminodeoxychorismate synthase, component I, clade 2 YP_006294559.1 PFAM: Amino acid kinase family YP_006294560.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_006294561.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006294562.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_006294563.1 PFAM: Shikimate kinase YP_006294565.1 PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ YP_006294566.1 PFAM: Pilus assembly protein, PilP YP_006294567.1 PFAM: Pilus assembly protein, PilO YP_006294568.1 PFAM: Fimbrial assembly protein (PilN) YP_006294569.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_006294570.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_006294571.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006294572.1 PFAM: NnrS protein YP_006294573.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006294574.1 PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein YP_006294576.1 PFAM: Peptidase family M48 YP_006294577.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_006294578.1 PFAM: Tellurite resistance protein TehB YP_006294579.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_006294580.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_006294581.1 PFAM: CBS domain; Transporter associated domain YP_006294582.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_006294583.1 PFAM: PhoH-like protein YP_006294584.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_006294587.1 PFAM: Domain of unknown function (DUF336) YP_006294588.1 PFAM: Thrombospondin C-terminal region YP_006294589.1 PFAM: YcaO-like family; TIGRFAM: uncharacterized domain YP_006294590.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family YP_006294591.1 PFAM: Domain of unknown function (DUF1840) YP_006294594.1 PFAM: Domain of unknown function (DUF1971) YP_006294595.1 PFAM: Uracil DNA glycosylase superfamily YP_006294596.1 PFAM: Protein of unknown function (DUF1488) YP_006294597.1 PFAM: MgtC family YP_006294599.1 PFAM: Calcineurin-like phosphoesterase YP_006294600.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein YP_006294601.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_006294603.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent YP_006294606.1 PFAM: Phosphate-starvation-inducible E YP_006294607.1 PFAM: MOSC domain YP_006294609.1 PFAM: Cytochrome P450 YP_006294610.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_006294611.1 PFAM: Peptidase propeptide and YPEB domain; Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB YP_006294612.1 PFAM: Prokaryotic cytochrome b561 YP_006294613.1 TIGRFAM: hemerythrin-like metal-binding domain YP_006294614.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_006294615.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006294616.1 PFAM: Cytochrome C biogenesis protein transmembrane region; Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein YP_006294617.1 PFAM: Cytochrome c YP_006294619.1 PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase YP_006294620.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_006294621.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_006294622.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_006294623.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006294624.1 TIGRFAM: phosphate binding protein YP_006294625.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR YP_006294626.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_006294627.1 PFAM: Major Facilitator Superfamily YP_006294628.1 PFAM: Phosphate transporter family YP_006294629.1 PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region YP_006294630.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_006294631.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_006294632.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006294633.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_006294634.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_006294635.1 PFAM: Bacterial regulatory protein, Fis family YP_006294636.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_006294637.1 PFAM: Adenylate cyclase, class-I YP_006294638.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_006294641.1 PFAM: Protein of unknown function, DUF583 YP_006294642.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_006294643.1 PFAM: Predicted membrane protein (DUF2254) YP_006294644.1 PFAM: Bacterial regulatory proteins, tetR family YP_006294645.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006294646.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006294647.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006294649.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006294651.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006294652.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006294653.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_006294654.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_006294655.1 PFAM: Methyltransferase domain YP_006294656.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE YP_006294657.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_006294658.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_006294659.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_006294660.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_006294661.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_006294662.1 PFAM: HemY protein N-terminus; TIGRFAM: hemY protein YP_006294663.1 PFAM: HemX YP_006294664.1 PFAM: Uroporphyrinogen-III synthase HemD YP_006294665.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_006294666.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_006294667.1 PFAM: Protein of unknown function (DUF2914) YP_006294669.1 PFAM: Protein of unknown function (DUF3325) YP_006294671.1 PFAM: Protein of unknown function (DUF3649) YP_006294672.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294673.1 PFAM: FecR protein YP_006294674.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294675.1 PFAM: Catalase; Catalase-related immune-responsive YP_006294676.1 PFAM: Domain of Unknown Function (DUF748) YP_006294677.1 PFAM: Rho termination factor, N-terminal domain YP_006294678.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294679.1 PFAM: FecR protein YP_006294680.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294681.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_006294684.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006294687.1 FIG00594950 YP_006294688.1 PFAM: Putative esterase YP_006294689.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294690.1 PFAM: FecR protein YP_006294691.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294693.1 PepSY-associated TM helix domain YP_006294694.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294695.1 PFAM: FecR protein YP_006294696.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294697.1 PFAM: Fic/DOC family YP_006294699.1 TIGRFAM: addiction module antidote protein, HigA family YP_006294700.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294701.1 PFAM: FecR protein YP_006294702.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294703.1 PFAM: Sigma-70 region 2 YP_006294704.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294705.1 PFAM: FecR protein YP_006294706.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294707.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_006294708.1 PFAM: FecR protein YP_006294709.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006294710.1 PFAM: Tellurite resistance protein TerB YP_006294711.1 PFAM: Acetyltransferase (GNAT) family; Domain of unknown function (DUF3335) YP_006294712.1 PFAM: Protein of unknown function (DUF2817) YP_006294714.1 PFAM: RimK-like ATP-grasp domain YP_006294715.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_006294716.1 PFAM: DnaJ domain; DnaJ C terminal region YP_006294717.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_006294718.1 PFAM: Protein of unknown function (DUF1348) YP_006294719.1 PFAM: Bacterial regulatory proteins, tetR family YP_006294721.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_006294722.1 PFAM: PemK-like protein YP_006294723.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_006294724.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_006294725.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_006294726.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_006294727.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_006294728.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_006294729.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_006294730.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_006294731.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_006294732.1 PFAM: ATP synthase I chain YP_006294733.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_006294734.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006294735.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_006294736.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_006294737.1 PFAM: Prokaryotic diacylglycerol kinase YP_006294738.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_006294739.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_006294740.1 PFAM: Nitrogen regulatory protein P-II YP_006294741.1 PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter YP_006294742.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_006294743.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial YP_006294744.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_006294746.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_006294747.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_006294748.1 PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain YP_006294749.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_006294750.1 PFAM: Protein of unknown function (DUF494) YP_006294751.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_006294752.1 PFAM: LysM domain YP_006294753.1 PFAM: Cytochrome c YP_006294754.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_006294755.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_006294756.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_006294758.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006294759.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006294760.1 PFAM: TrkA-N domain; TrkA-C domain YP_006294761.1 PFAM: Uncharacterized ACR, COG1678 YP_006294762.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_006294763.1 PFAM: Phosphoribosyl transferase domain YP_006294764.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_006294765.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_006294766.1 PFAM: Protein of unknown function (DUF3012) YP_006294768.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin YP_006294769.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_006294770.1 PFAM: ABC transporter; TOBE domain YP_006294771.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006294772.1 PFAM: Bacterial extracellular solute-binding protein YP_006294775.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006294777.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin YP_006294778.1 PFAM: Domain of unknown function DUF20 YP_006294781.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006294782.1 PFAM: AcrB/AcrD/AcrF family YP_006294783.1 PFAM: Lipocalin-like domain YP_006294784.1 PFAM: Protein of unknown function (DUF2805); TIGRFAM: TIGR03643 family protein YP_006294785.1 PFAM: MAPEG family YP_006294786.1 PFAM: Fructose-1-6-bisphosphatase YP_006294787.1 PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C YP_006294788.1 PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase YP_006294789.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A YP_006294790.1 TIGRFAM: formylmethanofuran dehydrogenase subunit B YP_006294792.1 PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN YP_006294793.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_006294794.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_006294795.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_006294796.1 PFAM: Dihydrofolate reductase YP_006294797.1 PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein YP_006294799.1 PFAM: Pentapeptide repeats (8 copies) YP_006294800.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_006294801.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_006294802.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_006294803.1 PFAM: Scavenger mRNA decapping enzyme C-term binding YP_006294804.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_006294805.1 PFAM: Phosphoribosyl-AMP cyclohydrolase YP_006294806.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_006294807.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006294808.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_006294809.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_006294810.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006294811.1 PFAM: OmpW family YP_006294812.1 PFAM: OmpW family YP_006294813.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_006294815.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006294816.1 PFAM: Rubredoxin YP_006294817.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_006294818.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_006294819.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006294820.1 PFAM: Flavoprotein YP_006294821.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein YP_006294822.1 PFAM: Protein of unknown function (DUF447) YP_006294823.1 PFAM: Protein of unknown function (DUF556) YP_006294824.1 PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase YP_006294825.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006294826.1 PFAM: Response regulator receiver domain YP_006294827.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein YP_006294828.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_006294829.1 PFAM: Peptidase family M23 YP_006294830.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006294832.1 PFAM: Rhodanese-like domain YP_006294833.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family YP_006294834.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB YP_006294835.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_006294837.1 PFAM: Uncharacterized ACR, COG1565 YP_006294838.1 PFAM: short chain dehydrogenase YP_006294839.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_006294841.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_006294842.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_006294843.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_006294844.1 PFAM: Yqey-like protein YP_006294845.1 PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_006294846.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_006294847.1 PFAM: Phage integrase family YP_006294849.1 PFAM: Bacterial mobilisation protein (MobC) YP_006294850.1 PFAM: Relaxase/Mobilisation nuclease domain YP_006294852.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006294853.1 PFAM: LAGLIDADG endonuclease YP_006294858.1 PFAM: ABC transporter YP_006294859.1 PFAM: HlyD family secretion protein YP_006294860.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006294861.1 PFAM: Bacterial regulatory proteins, tetR family YP_006294868.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_006294869.1 PFAM: Fructose-1-6-bisphosphatase YP_006294870.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_006294872.1 PFAM: Uncharacterized protein family UPF0057 YP_006294873.1 PFAM: Entericidin EcnA/B family YP_006294875.1 PFAM: FecR protein YP_006294876.1 PFAM: OmpA family YP_006294877.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006294878.1 PFAM: Redoxin YP_006294880.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_006294881.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_006294882.1 PFAM: XdhC and CoxI family YP_006294884.1 PFAM: Protein of unknown function (DUF1328) YP_006294886.1 PFAM: Bacterial protein of unknown function (DUF883) YP_006294887.1 PFAM: Protein of unknown function (DUF1469) YP_006294890.1 PFAM: Sodium:solute symporter family YP_006294893.1 PFAM: Outer membrane efflux protein YP_006294895.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_006294897.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006294898.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006294899.1 PFAM: KWG Leptospira YP_006294900.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, plant; glutathione-disulfide reductase, animal/bacterial YP_006294901.1 PFAM: Redoxin YP_006294902.1 PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006294903.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006294904.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_006294905.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006294906.1 PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain YP_006294907.1 PFAM: Peptidase propeptide and YPEB domain YP_006294908.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006294909.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006294910.1 PFAM: Peptidase propeptide and YPEB domain YP_006294911.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_006294912.1 PFAM: Catalase; Catalase-related immune-responsive YP_006294913.1 PFAM: Ferritin-like domain YP_006294914.1 PFAM: Aldehyde dehydrogenase family YP_006294915.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006294916.1 PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein YP_006294918.1 PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006294919.1 PFAM: Sodium:neurotransmitter symporter family YP_006294921.1 PFAM: SNARE associated Golgi protein YP_006294922.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_006294924.1 PFAM: Domain of Unknown Function (DUF748) YP_006294926.1 IS982 family YP_006294927.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_006294928.1 PFAM: von Willebrand factor type A domain YP_006294929.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_006294930.1 PFAM: Cytochrome c YP_006294931.1 PFAM: GAF domain; Sigma-54 interaction domain YP_006294932.1 PFAM: Cytochrome c oxidase subunit III YP_006294934.1 PFAM: NnrS protein YP_006294935.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_006294936.1 PFAM: DGC domain YP_006294937.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain YP_006294938.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006294940.1 PFAM: Major Facilitator Superfamily YP_006294941.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_006294942.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_006294943.1 TIGRFAM: nitrate reductase, beta subunit YP_006294944.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_006294945.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit YP_006294946.1 PFAM: Carbonic anhydrase YP_006294948.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD YP_006294949.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain YP_006294950.1 PFAM: Protein of unknown function (DUF989) YP_006294951.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_006294952.1 PFAM: Dihydroorotate dehydrogenase YP_006294953.1 PFAM: Transposase DDE domain YP_006294954.1 PFAM: FMN-binding domain YP_006294955.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies) YP_006294956.1 PFAM: ABC transporter YP_006294958.1 PFAM: NosL YP_006294959.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase YP_006294961.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_006294962.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_006294963.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_006294964.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_006294965.1 PFAM: SCP-2 sterol transfer family YP_006294966.1 PFAM: Peptidase family U32; FIG139552 YP_006294967.1 PFAM: Peptidase family U32 YP_006294973.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_006294974.1 PFAM: PPIC-type PPIASE domain YP_006294975.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit YP_006294976.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_006294977.1 TIGRFAM: nitrate reductase, beta subunit YP_006294978.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_006294979.1 PFAM: von Willebrand factor type A domain YP_006294980.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_006294981.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_006294982.1 PFAM: Cytochrome c YP_006294986.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_006294987.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein YP_006294988.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_006294989.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_006294990.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_006294991.1 PFAM: Coproporphyrinogen III oxidase YP_006294992.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_006294993.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_006294994.1 PFAM: Tetratricopeptide repeat YP_006294995.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB YP_006294996.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_006294997.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_006294998.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_006294999.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_006295000.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_006295001.1 PFAM: Phospholipase A1 YP_006295002.1 PFAM: Mechanosensitive ion channel YP_006295004.1 PFAM: Transposase DDE domain YP_006295010.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_006295012.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006295013.1 PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain YP_006295014.1 PFAM: Ribulose bisphosphate carboxylase, small chain YP_006295015.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_006295016.1 PFAM: von Willebrand factor type A domain YP_006295018.1 PFAM: EAL domain; GGDEF domain; NMT1/THI5 like; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006295021.1 PFAM: von Willebrand factor type A domain YP_006295024.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006295025.1 PFAM: Methanol dehydrogenase beta subunit YP_006295026.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c(L), periplasmic YP_006295027.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: methanol oxidation system protein MoxJ YP_006295028.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006295029.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006295030.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006295032.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006295033.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat YP_006295034.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_006295035.1 PFAM: Transglycosylase SLT domain; LysM domain YP_006295036.1 PFAM: Protein of unknown function (DUF2797) YP_006295037.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_006295038.1 PFAM: Mechanosensitive ion channel YP_006295039.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase YP_006295040.1 PFAM: Methyltransferase domain YP_006295041.1 PFAM: RNase H YP_006295042.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial YP_006295043.1 PFAM: GrpE YP_006295044.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_006295045.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_006295046.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_006295049.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B YP_006295050.1 PFAM: Bacterial protein of unknown function (DUF898) YP_006295051.1 PFAM: Peptidase family M48 YP_006295052.1 PFAM: AhpC/TSA family YP_006295053.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_006295054.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006295055.1 PFAM: Phosphoglycerate kinase YP_006295056.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_006295057.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_006295058.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_006295059.1 PFAM: Uncharacterized ACR, COG1993 YP_006295060.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_006295061.1 PFAM: Peptidase family M50 YP_006295062.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_006295063.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_006295064.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006295065.1 PFAM: short chain dehydrogenase YP_006295067.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase YP_006295068.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD YP_006295070.1 PFAM: Polyprenyl synthetase YP_006295071.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_006295072.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_006295073.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_006295074.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_006295075.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_006295076.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_006295078.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_006295080.1 PFAM: Protein of unknown function (DUF861) YP_006295081.1 PFAM: Helix-turn-helix YP_006295082.1 TIGRFAM: addiction module toxin, RelE/StbE family YP_006295085.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif YP_006295087.1 PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease YP_006295090.1 PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase YP_006295091.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_006295092.1 PFAM: Major Facilitator Superfamily YP_006295093.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_006295094.1 PFAM: CYTH domain YP_006295095.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006295096.1 PFAM: ApbE family YP_006295097.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic YP_006295098.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_006295099.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_006295100.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain YP_006295101.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006295102.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006295103.1 PFAM: Peptidase family M48 YP_006295104.1 PFAM: ATP-grasp domain YP_006295105.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal YP_006295106.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase YP_006295107.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Shikimate / quinate 5-dehydrogenase YP_006295110.1 PFAM: Sulphur oxidation protein SoxZ YP_006295111.1 PFAM: Metallo-beta-lactamase superfamily YP_006295112.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_006295113.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006295114.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein YP_006295117.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295118.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006295119.1 PFAM: Stringent starvation protein B YP_006295120.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006295121.1 PFAM: Cytochrome C1 family YP_006295122.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD YP_006295123.1 PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_006295124.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin YP_006295126.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_006295127.1 PFAM: Protein of unknown function (DUF502) YP_006295128.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_006295129.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_006295130.1 PFAM: Zinc-finger domain YP_006295131.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_006295132.1 PFAM: Domain of unknown function (DUF329) YP_006295133.1 PFAM: Protein of unknown function (DUF1342) YP_006295134.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_006295135.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_006295136.1 PFAM: Bacterial type II secretion system protein F domain YP_006295137.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB YP_006295139.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_006295140.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_006295141.1 PFAM: Protein of unknown function, DUF484 YP_006295142.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_006295143.1 PFAM: Sodium/calcium exchanger protein YP_006295144.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006295145.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_006295146.1 PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein YP_006295147.1 PFAM: Protein of unknown function (DUF3429) YP_006295148.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_006295149.1 PFAM: Transposase DDE domain YP_006295150.1 PFAM: Exonuclease YP_006295151.1 PFAM: Peptidase family M48; macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides YP_006295153.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006295154.1 PFAM: Major Facilitator Superfamily YP_006295155.1 PFAM: Universal stress protein family YP_006295156.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_006295157.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_006295158.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA YP_006295159.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_006295160.1 PFAM: Protein of unknown function (DUF548) YP_006295161.1 PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat YP_006295162.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006295163.1 PFAM: ABC transporter YP_006295164.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_006295165.1 PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein YP_006295166.1 PFAM: Toluene tolerance, Ttg2 YP_006295168.1 PFAM: BolA-like protein YP_006295169.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006295170.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_006295171.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_006295172.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_006295174.1 PFAM: Sulfite exporter TauE/SafE YP_006295175.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_006295176.1 PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW YP_006295177.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_006295178.1 PFAM: YGGT family YP_006295179.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_006295180.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_006295181.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006295182.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006295183.1 PFAM: OmpA family YP_006295184.1 PFAM: CsbD-like YP_006295185.1 PFAM: Putative phospholipid-binding domain YP_006295187.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006295188.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain YP_006295189.1 PFAM: Helix-turn-helix YP_006295194.1 PFAM: Integrase core domain YP_006295195.1 PFAM: SNARE associated Golgi protein YP_006295196.1 PFAM: Glycosyl transferases group 1 YP_006295197.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006295198.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295199.1 PFAM: Prokaryotic diacylglycerol kinase YP_006295200.1 PFAM: Sulfatase YP_006295201.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_006295203.1 PFAM: Protein of unknown function (DUF3423) YP_006295207.1 PFAM: Transposase YP_006295208.1 PFAM: IS66 Orf2 like protein YP_006295209.1 PFAM: Transposase IS66 family YP_006295210.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain YP_006295211.1 PFAM: Helix-turn-helix YP_006295213.1 PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220) YP_006295220.1 PFAM: ThiF family YP_006295221.1 PFAM: Phage integrase family YP_006295224.1 PFAM: Domain of unknown function (DUF3596); Phage integrase family YP_006295225.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit YP_006295227.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_006295228.1 PFAM: Type I restriction modification DNA specificity domain YP_006295230.1 PFAM: Domain of unknown function DUF87 YP_006295231.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases YP_006295232.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_006295233.1 PFAM: Cytochrome c YP_006295234.1 PFAM: ResB-like family YP_006295235.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_006295236.1 PFAM: DSBA-like thioredoxin domain YP_006295237.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3 YP_006295238.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_006295239.1 PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_006295240.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_006295241.1 PFAM: Lipid A 3-O-deacylase (PagL) YP_006295242.1 PFAM: Ribosomal protein S9/S16 YP_006295243.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_006295244.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_006295245.1 PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain YP_006295246.1 PFAM: HopJ type III effector protein YP_006295247.1 PFAM: Nitroreductase family YP_006295248.1 PFAM: Protein of unknown function (DUF454) YP_006295250.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF YP_006295251.1 PFAM: Outer membrane lipoprotein Slp family YP_006295257.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating) YP_006295258.1 PFAM: SdiA-regulated YP_006295260.1 PFAM: Acylphosphatase YP_006295269.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_006295270.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_006295271.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_006295272.1 PFAM: Peptidase family M23 YP_006295273.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box YP_006295274.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_006295275.1 PFAM: OstA-like protein; Bacterial SH3 domain; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_006295276.1 PFAM: Protein of unknown function (DUF1239) YP_006295277.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_006295278.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_006295279.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_006295280.1 PFAM: VacJ like lipoprotein YP_006295281.1 PFAM: Glycosyl transferases group 1 YP_006295282.1 Ser/Thr protein phosphatase family protein YP_006295283.1 PFAM: Peptidase family M3 YP_006295286.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_006295287.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family YP_006295288.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_006295290.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases YP_006295291.1 PFAM: MAPEG family YP_006295292.1 PFAM: Major Facilitator Superfamily YP_006295293.1 PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD YP_006295294.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_006295295.1 PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type YP_006295296.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006295297.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_006295298.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_006295299.1 PFAM: MoaE protein YP_006295300.1 PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal YP_006295301.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_006295302.1 PFAM: Phosphate-selective porin O and P YP_006295303.1 PFAM: Phosphate-selective porin O and P YP_006295305.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2333) YP_006295306.1 PFAM: ABC transporter YP_006295308.1 PFAM: ABC-type uncharacterized transport system YP_006295310.1 PFAM: CheW-like domain; Response regulator receiver domain YP_006295311.1 PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA YP_006295312.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_006295313.1 PFAM: FlgN protein YP_006295314.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_006295315.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein YP_006295316.1 PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722); COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA YP_006295317.1 PFAM: Histone deacetylase domain YP_006295318.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006295319.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295320.1 PFAM: HD domain; Response regulator receiver domain YP_006295321.1 PFAM: CbiX YP_006295324.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006295325.1 PFAM: Fatty acid desaturase YP_006295327.1 PFAM: Protein kinase domain YP_006295329.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_006295331.1 PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal YP_006295332.1 PFAM: Integrase core domain YP_006295333.1 PFAM: Competence protein CoiA-like family YP_006295335.1 PFAM: Protein of unknown function (DUF1778) YP_006295337.1 PFAM: Uncharacterized conserved protein (DUF2149) YP_006295339.1 PFAM: CobN/Magnesium Chelatase YP_006295340.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006295341.1 PFAM: Protein of unknown function (DUF502) YP_006295343.1 PFAM: SirA-like protein YP_006295344.1 PFAM: Peptidase family M48 YP_006295346.1 PFAM: Sulphur oxidation protein SoxZ YP_006295347.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_006295348.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006295349.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006295350.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006295351.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006295352.1 TIGRFAM: coenzyme PQQ biosynthesis protein B YP_006295353.1 PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C YP_006295354.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD YP_006295355.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain YP_006295356.1 PFAM: ABC transporter YP_006295357.1 PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein YP_006295358.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_006295359.1 PFAM: Rhodanese-like domain YP_006295360.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006295361.1 PFAM: Isochorismatase family YP_006295362.1 PFAM: Protein of unknown function (DUF1289) YP_006295363.1 PFAM: Radical SAM superfamily; B12 binding domain YP_006295364.1 PFAM: Exonuclease; Exonuclease C-terminal YP_006295365.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_006295366.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006295367.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006295368.1 PFAM: Protein of unknown function (DUF3450) YP_006295369.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006295370.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006295371.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006295372.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006295374.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_006295375.1 PFAM: Formylglycine-generating sulfatase enzyme YP_006295376.1 PFAM: Aminotransferase class I and II YP_006295377.1 PFAM: Protein of unknown function (DUF2582) YP_006295378.1 PFAM: Protein of unknown function (DUF3365) YP_006295379.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial YP_006295380.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial YP_006295381.1 PFAM: Protein of unknown function (DUF3305) YP_006295382.1 PFAM: Protein of unknown function (DUF3306) YP_006295383.1 PFAM: 4Fe-4S binding domain YP_006295384.1 PFAM: Nitrate reductase delta subunit YP_006295385.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006295388.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit YP_006295389.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006295390.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type YP_006295391.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_006295392.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_006295393.1 PFAM: SNARE associated Golgi protein YP_006295395.1 PFAM: Peptidase family M23 YP_006295396.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_006295397.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_006295398.1 PFAM: Phage integrase family; TIGRFAM: integron integrase YP_006295406.1 PFAM: Thioredoxin YP_006295408.1 PFAM: Helix-turn-helix YP_006295409.1 PFAM: ATP dependent DNA ligase domain YP_006295410.1 PFAM: Thioredoxin YP_006295411.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family YP_006295412.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_006295413.1 PFAM: Transglycosylase SLT domain YP_006295415.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006295418.1 PFAM: Transposase DDE domain YP_006295421.1 PFAM: Methyltransferase domain YP_006295422.1 PFAM: Ribbon-helix-helix protein, copG family YP_006295423.1 PFAM: Plasmid stabilisation system protein YP_006295425.1 PFAM: Protein of unknown function (DUF3144) YP_006295428.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_006295429.1 PFAM: RIO1 family YP_006295430.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_006295432.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294 YP_006295433.1 PFAM: Exonuclease YP_006295434.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006295436.1 PFAM: Universal stress protein family YP_006295438.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC YP_006295439.1 PFAM: RmuC family YP_006295440.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_006295441.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_006295442.1 PFAM: Amidohydrolase family YP_006295443.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_006295444.1 PFAM: short chain dehydrogenase YP_006295445.1 PFAM: Phosphotransferase enzyme family YP_006295446.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_006295447.1 PFAM: YKOF-related Family YP_006295448.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006295449.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006295450.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006295452.1 PFAM: Sulfite exporter TauE/SafE YP_006295453.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin) YP_006295454.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_006295455.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain YP_006295457.1 PFAM: EAL domain YP_006295458.1 PFAM: Uracil DNA glycosylase superfamily YP_006295459.1 PFAM: Protein of unknown function (DUF3465) YP_006295461.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_006295462.1 PFAM: Bacterial protein of unknown function (DUF934) YP_006295463.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_006295464.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_006295465.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_006295466.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_006295467.1 PFAM: Phosphatidylglycerophosphatase A YP_006295468.1 PFAM: pfkB family carbohydrate kinase YP_006295469.1 PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D YP_006295471.1 PFAM: Glutaredoxin-like domain (DUF836) YP_006295472.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain YP_006295473.1 PFAM: Rickettsia 17 kDa surface antigen; OmpA family YP_006295474.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_006295475.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_006295476.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_006295478.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_006295479.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase YP_006295480.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_006295481.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_006295482.1 PFAM: PilZ domain YP_006295483.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein YP_006295484.1 PFAM: Putative phospholipid-binding domain YP_006295485.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_006295486.1 PFAM: LppC putative lipoprotein YP_006295487.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_006295488.1 PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family YP_006295489.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006295490.1 PFAM: AcrB/AcrD/AcrF family YP_006295491.1 PFAM: Bacterial domain of unknown function (DUF403); Cytochrome C' YP_006295492.1 PFAM: Transposase DDE domain YP_006295493.1 PFAM: Transposase YP_006295494.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_006295495.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_006295496.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL YP_006295497.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_006295498.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_006295499.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_006295500.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_006295501.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006295502.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_006295503.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphoryl- undecaprenol N-acetylglucosamine transferase YP_006295504.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_006295505.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_006295506.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_006295507.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_006295508.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_006295509.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_006295510.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_006295511.1 PFAM: Protein of unknown function (DUF721) YP_006295512.1 PFAM: Peptidase family M23 YP_006295513.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_006295514.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_006295515.1 PFAM: Protein of unknown function (DUF3549) YP_006295516.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006295517.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_006295518.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_006295519.1 PFAM: Nucleoside recognition YP_006295520.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_006295521.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; TC 2.A.44 family YP_006295522.1 PFAM: Protein of unknown function (DUF1458) YP_006295523.1 PFAM: Family of unknown function (DUF500) YP_006295524.1 PFAM: ABC transporter YP_006295525.1 PFAM: GIY-YIG catalytic domain YP_006295526.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_006295527.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3 YP_006295528.1 PFAM: HD domain; Response regulator receiver domain YP_006295529.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_006295530.1 PFAM: ABC transporter YP_006295531.1 PFAM: ABC transporter YP_006295534.1 PFAM: 'Cold-shock' DNA-binding domain YP_006295535.1 PFAM: Bacterial Fe(2+) trafficking YP_006295536.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_006295537.1 PFAM: AsmA family YP_006295539.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_006295540.1 PFAM: Cytochrome C assembly protein YP_006295541.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_006295542.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_006295543.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_006295544.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_006295545.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_006295546.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_006295547.1 PFAM: Protein of unknown function (DUF520) YP_006295548.1 PFAM: Disulfide bond isomerase protein N-terminus YP_006295549.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase YP_006295550.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_006295551.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_006295552.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_006295553.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_006295554.1 PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain YP_006295555.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_006295556.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006295557.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006295558.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006295559.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006295560.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter YP_006295561.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_006295562.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_006295564.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_006295565.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form YP_006295566.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_006295567.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_006295568.1 PFAM: Polysaccharide biosynthesis protein YP_006295569.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_006295570.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_006295571.1 PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family YP_006295572.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_006295573.1 PFAM: WbqC-like protein family YP_006295574.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: intein N-terminal splicing region YP_006295577.1 PFAM: Polysaccharide biosynthesis protein YP_006295578.1 PFAM: Glycosyl transferase family 2 YP_006295579.1 PFAM: Glycosyl transferase family 2 YP_006295580.1 PFAM: Galactosyltransferase; Glycosyl transferase family 2 YP_006295581.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006295582.1 PFAM: NAD dependent epimerase/dehydratase family YP_006295583.1 PFAM: Bacterial sugar transferase YP_006295584.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_006295586.1 PFAM: HMGL-like YP_006295587.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_006295589.1 PFAM: Glycosyl transferases group 1 YP_006295590.1 TIGRFAM: methyltransferase, FkbM family YP_006295591.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_006295592.1 PFAM: NAD dependent epimerase/dehydratase family YP_006295593.1 PFAM: Glycosyl transferases group 1 YP_006295594.1 PFAM: Glycosyl transferases group 1 YP_006295595.1 PFAM: ABC transporter YP_006295596.1 PFAM: ABC-2 type transporter YP_006295598.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK) YP_006295600.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_006295601.1 PFAM: LAGLIDADG endonuclease YP_006295602.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006295604.1 PFAM: Transposase IS66 family YP_006295605.1 PFAM: IS66 Orf2 like protein YP_006295606.1 PFAM: Transposase YP_006295609.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase YP_006295610.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_006295611.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_006295612.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_006295613.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_006295614.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_006295615.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_006295616.1 PFAM: Cytidylyltransferase family YP_006295617.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006295618.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_006295619.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_006295620.1 PFAM: Outer membrane protein (OmpH-like) YP_006295621.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006295622.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_006295623.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_006295624.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_006295625.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133) YP_006295626.1 PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL YP_006295627.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain YP_006295629.1 PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family YP_006295630.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_006295631.1 PFAM: Bacterial regulatory proteins, luxR family YP_006295632.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006295633.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA YP_006295634.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_006295637.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_006295638.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_006295639.1 PFAM: short chain dehydrogenase YP_006295640.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_006295642.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade YP_006295643.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_006295644.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_006295645.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase YP_006295646.1 PFAM: EamA-like transporter family YP_006295649.1 PFAM: PP-loop family YP_006295650.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_006295651.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_006295652.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family YP_006295653.1 PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein YP_006295654.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_006295655.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_006295656.1 PFAM: Polyprenyl synthetase; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase YP_006295657.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_006295658.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_006295660.1 PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance YP_006295661.1 PFAM: Transcription elongation factor, GreA/GreB, C-term YP_006295663.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_006295665.1 PFAM: Small Multidrug Resistance protein YP_006295666.1 PFAM: Domain of unknown function DUF YP_006295668.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006295669.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006295670.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase YP_006295671.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_006295672.1 PFAM: Aldehyde dehydrogenase family YP_006295673.1 PFAM: Protein of unknown function (DUF330) YP_006295674.1 PFAM: mce related protein YP_006295675.1 PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family YP_006295679.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_006295681.1 PFAM: Predicted permease YP_006295682.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_006295683.1 PFAM: YCII-related domain YP_006295684.1 PFAM: YCII-related domain; 3-demethylubiquinone-9 3-methyltransferase YP_006295685.1 PFAM: Calcium/calmodulin dependent protein kinase II Association YP_006295686.1 PFAM: Bacterial type II secretion system protein G YP_006295687.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006295688.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006295689.1 PFAM: NmrA-like family YP_006295691.1 PFAM: Major Facilitator Superfamily YP_006295694.1 PFAM: Phosphoglycerate mutase family YP_006295695.1 PFAM: Mechanosensitive ion channel; Putative modulator of DNA gyrase YP_006295699.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_006295700.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006295701.1 PFAM: Metallo-beta-lactamase superfamily YP_006295702.1 PFAM: Sulfite exporter TauE/SafE YP_006295703.1 PFAM: Protein of unknown function (DUF2892) YP_006295704.1 PFAM: Bacterial regulatory protein, arsR family YP_006295705.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_006295706.1 PFAM: Uncharacterized protein family UPF0016 YP_006295707.1 FIG01181932 YP_006295708.1 PFAM: ThiF family YP_006295709.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488) YP_006295710.1 PFAM: Protein of unknown function DUF58 YP_006295711.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006295713.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_006295715.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_006295716.1 PFAM: Rhodanese-like domain YP_006295718.1 PFAM: Bacterial protein of unknown function (DUF882) YP_006295719.1 PFAM: FecCD transport family YP_006295720.1 PFAM: ABC transporter YP_006295721.1 PFAM: Periplasmic binding protein YP_006295722.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_006295723.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_006295724.1 PFAM: Protein of unknown function (DUF2803) YP_006295725.1 PFAM: SPFH domain / Band 7 family YP_006295726.1 PFAM: NfeD-like YP_006295727.1 PFAM: Phosphoglycerate mutase family YP_006295728.1 PFAM: Cupin superfamily protein YP_006295729.1 PFAM: Protein of unknown function (DUF1451) YP_006295730.1 PFAM: Disulfide bond formation protein DsbB YP_006295731.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_006295732.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus YP_006295733.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_006295734.1 PFAM: HDOD domain YP_006295735.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_006295736.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_006295737.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_006295738.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_006295739.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_006295741.1 PFAM: Predicted membrane protein (DUF2069) YP_006295742.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV YP_006295743.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; arsenate reductase (glutaredoxin) YP_006295745.1 PFAM: Protein of unknown function (DUF1049) YP_006295746.1 PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain YP_006295747.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_006295748.1 PFAM: Predicted permease YP_006295749.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein YP_006295750.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_006295751.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_006295752.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_006295753.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_006295754.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_006295756.1 PFAM: H-NS histone family YP_006295757.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_006295758.1 PFAM: Rare lipoprotein B family YP_006295759.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_006295760.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_006295761.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; bacterial NadD family YP_006295762.1 PFAM: DUF218 domain YP_006295763.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_006295764.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_006295765.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_006295766.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_006295767.1 TIGRFAM: TIGR02099 family protein YP_006295768.1 PFAM: Putative modulator of DNA gyrase YP_006295769.1 PFAM: SirA-like protein YP_006295770.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_006295772.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_006295773.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I) YP_006295774.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_006295775.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication YP_006295776.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_006295777.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_006295778.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_006295779.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_006295780.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_006295781.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_006295782.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_006295783.1 PFAM: ABC transporter YP_006295784.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006295785.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006295786.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006295787.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006295788.1 PFAM: Protein of unknown function (DUF815) YP_006295789.1 PFAM: His Kinase A (phosphoacceptor) domain YP_006295790.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006295791.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006295792.1 PFAM: Outer membrane efflux protein YP_006295793.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_006295795.1 PFAM: Mechanosensitive ion channel YP_006295796.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_006295797.1 PFAM: Universal stress protein family YP_006295798.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_006295799.1 PFAM: GAF domain; GGDEF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006295800.1 PFAM: Protein of unknwon function (DUF2893) YP_006295801.1 PFAM: Domain of unknown function (DUF1814) YP_006295802.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_006295803.1 PFAM: CBS domain YP_006295804.1 PFAM: Protein of unknown function (DUF3579) YP_006295805.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_006295806.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_006295807.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_006295808.1 PFAM: Prephenate dehydrogenase YP_006295809.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_006295810.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_006295811.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_006295812.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_006295813.1 PFAM: Protein of unknown function (DUF498/DUF598) YP_006295814.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I YP_006295815.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II YP_006295816.1 PFAM: Cbb3-type cytochrome oxidase component FixQ YP_006295817.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_006295819.1 PFAM: FixH YP_006295820.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type YP_006295821.1 PFAM: Receptor family ligand binding region YP_006295822.1 PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006295824.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_006295825.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily YP_006295826.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_006295827.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_006295828.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_006295829.1 PFAM: Nitrogen regulatory protein P-II YP_006295830.1 TIGRFAM: outer membrane assembly lipoprotein YfiO YP_006295831.1 PFAM: L,D-transpeptidase catalytic domain YP_006295833.1 PFAM: Inositol monophosphatase family YP_006295834.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_006295836.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295837.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006295838.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ YP_006295840.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_006295841.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family YP_006295842.1 PFAM: Anti sigma-E protein RseA, N-terminal domain YP_006295843.1 PFAM: MucB/RseB family YP_006295844.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_006295845.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_006295847.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006295848.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295849.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein YP_006295850.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006295851.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_006295852.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006295854.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_006295855.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_006295856.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_006295857.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_006295858.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_006295859.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B YP_006295861.1 PFAM: Protein of unknown function (DUF1318) YP_006295862.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_006295863.1 TIGRFAM: VPLPA-CTERM protein sorting domain; PEP-CTERM protein sorting domain YP_006295864.1 PFAM: DNA alkylation repair enzyme YP_006295865.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_006295866.1 PFAM: Domain of unknown function (DUF299) YP_006295868.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_006295870.1 PFAM: PQQ enzyme repeat YP_006295871.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_006295872.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_006295873.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_006295874.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_006295875.1 TIGRFAM: PEP-CTERM protein sorting domain YP_006295877.1 TIGRFAM: PEP-CTERM protein sorting domain YP_006295878.1 PFAM: Polysaccharide biosynthesis/export protein YP_006295879.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2320) YP_006295880.1 PFAM: Chain length determinant protein YP_006295881.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_006295885.1 PFAM: Nucleotide-diphospho-sugar transferase YP_006295886.1 PFAM: Glycosyl transferase family 2 YP_006295887.1 PFAM: Polysaccharide biosynthesis protein YP_006295888.1 PFAM: Glycosyl transferases group 1 YP_006295889.1 PFAM: NAD dependent epimerase/dehydratase family YP_006295892.1 PFAM: Glycosyl transferase family 2 YP_006295893.1 PFAM: Sulfotransferase domain YP_006295894.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006295895.1 PFAM: Glycosyl transferase family 2 YP_006295897.1 PFAM: UbiA prenyltransferase family YP_006295898.1 PFAM: EamA-like transporter family YP_006295899.1 PFAM: Glycosyl transferase family 2 YP_006295900.1 PFAM: Glycosyl transferases group 1 YP_006295901.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_006295902.1 PFAM: Polysaccharide biosynthesis/export protein YP_006295903.1 PFAM: Chain length determinant protein YP_006295904.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_006295905.1 PFAM: O-Antigen ligase YP_006295906.1 PFAM: Polysaccharide biosynthesis protein YP_006295907.1 PFAM: Glycosyl transferases group 1 YP_006295908.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006295909.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006295910.1 PFAM: Glycosyl transferase family 2 YP_006295911.1 PFAM: Glycosyl transferases group 1 YP_006295912.1 PFAM: Methyltransferase domain YP_006295914.1 PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1 YP_006295916.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_006295917.1 PFAM: Transmembrane exosortase (Exosortase_EpsH); Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein; exosortase D, VPLPA-CTERM-specific; exosortase/archaeosortase family protein; exosortase YP_006295919.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006295920.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006295921.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006295922.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit YP_006295923.1 PFAM: Acyltransferase family YP_006295925.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_006295928.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_006295929.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_006295930.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_006295931.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein YP_006295932.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006295934.1 PFAM: Aminotransferase class I and II YP_006295935.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_006295936.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_006295937.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_006295938.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_006295939.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_006295940.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_006295941.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_006295942.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit YP_006295943.1 PFAM: MerR family regulatory protein YP_006295944.1 PFAM: Aldo/keto reductase family YP_006295945.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006295946.1 PFAM: MarR family YP_006295947.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase YP_006295948.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase YP_006295949.1 PFAM: Ectoine synthase YP_006295950.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase YP_006295951.1 PFAM: ChAPs (Chs5p-Arf1p-binding proteins) YP_006295954.1 PFAM: Transposase DDE domain YP_006295956.1 PFAM: Fatty acid desaturase YP_006295957.1 PFAM: Flavin containing amine oxidoreductase YP_006295958.1 PFAM: Protein of unknown function (DUF1365) YP_006295959.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_006295960.1 PFAM: Protein of unknown function (DUF2878) YP_006295961.1 PFAM: Protein of unknown function (DUF1295) YP_006295962.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_006295963.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006295964.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006295965.1 PFAM: BFD-like [2Fe-2S] binding domain YP_006295966.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_006295967.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_006295968.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1 YP_006295969.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_006295970.1 PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein YP_006295971.1 PFAM: Aminotransferase class-V YP_006295972.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_006295973.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_006295974.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin YP_006295975.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_006295976.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006295977.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006295978.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006295981.1 PFAM: von Willebrand factor type A domain YP_006295985.1 PFAM: L,D-transpeptidase catalytic domain YP_006295986.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_006295987.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_006295988.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006295989.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_006295990.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_006295991.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_006295992.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_006295993.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_006295994.1 PFAM: Septum formation initiator YP_006295995.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006295996.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_006295997.1 PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family YP_006295998.1 PFAM: Protein of unknown function (DUF1223) YP_006295999.1 PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain YP_006296000.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006296001.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_006296002.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006296003.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_006296004.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial YP_006296005.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_006296006.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_006296007.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD YP_006296008.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily YP_006296009.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family YP_006296010.1 PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein YP_006296011.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase YP_006296013.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296015.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296016.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296019.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_006296020.1 PFAM: Bacterial type II secretion system protein F domain YP_006296022.1 PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein YP_006296024.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006296025.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006296026.1 PFAM: Hsp20/alpha crystallin family YP_006296027.1 PFAM: Peptidase propeptide and YPEB domain YP_006296028.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_006296030.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_006296031.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup YP_006296032.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_006296033.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein YP_006296035.1 PFAM: Sucrose synthase; Glycosyl transferases group 1; Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; sucrose-phosphate synthase, putative, glycosyltransferase domain; HAD-superfamily hydrolase, subfamily IIB; sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial YP_006296036.1 PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; HAD-superfamily hydrolase, subfamily IIB YP_006296037.1 PFAM: pfkB family carbohydrate kinase YP_006296038.1 PFAM: Alpha amylase, catalytic domain YP_006296039.1 PFAM: Protein of unknown function, DUF393 YP_006296040.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: cryptochrome, DASH family YP_006296042.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_006296043.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296044.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_006296045.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458 YP_006296046.1 PFAM: Memo-like protein YP_006296047.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006296048.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006296049.1 PFAM: Flavodoxin-like fold YP_006296050.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_006296051.1 PFAM: Putative phospholipid-binding domain YP_006296053.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006296054.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006296055.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_006296058.1 PFAM: Tetratricopeptide repeat; TIGRFAM: conserved hypothetical protein YP_006296059.1 PFAM: AhpC/TSA family YP_006296060.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_006296061.1 PFAM: NlpB/DapX lipoprotein YP_006296062.1 PFAM: Metallo-beta-lactamase superfamily YP_006296063.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006296064.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase YP_006296065.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296066.1 PFAM: Protein of unknown function (DUF785) YP_006296067.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family YP_006296068.1 PFAM: Succinylglutamate desuccinylase / Aspartoacylase family YP_006296069.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic YP_006296070.1 PFAM: Saccharopine dehydrogenase YP_006296071.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase YP_006296072.1 PFAM: Arginase family; TIGRFAM: agmatinase YP_006296073.1 TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related YP_006296074.1 PFAM: Acetyltransferase (GNAT) family YP_006296075.1 PFAM: Carbon-nitrogen hydrolase YP_006296076.1 PFAM: ParA/MinD ATPase like YP_006296077.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_006296078.1 PFAM: WD domain, G-beta repeat YP_006296080.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type YP_006296081.1 PFAM: HIT domain YP_006296082.1 PFAM: Protein of unknown function (DUF2835) YP_006296083.1 PFAM: RDD family YP_006296084.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_006296085.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296086.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296087.1 PFAM: Rickettsia 17 kDa surface antigen YP_006296088.1 PFAM: EAL domain; HAMP domain; GGDEF domain; Nitrate and nitrite sensing; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296089.1 PFAM: LysE type translocator YP_006296090.1 PFAM: MASE1 YP_006296091.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296094.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296095.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I YP_006296097.1 PFAM: CBS domain YP_006296099.1 PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_006296100.1 PFAM: NADPH-dependent FMN reductase YP_006296101.1 PFAM: Ion channel YP_006296103.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006296104.1 PFAM: FecR protein YP_006296106.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain YP_006296109.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies) YP_006296110.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_006296111.1 PFAM: Bacterial type II secretion system protein F domain YP_006296112.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_006296115.1 PFAM: Pilus assembly protein, PilO YP_006296117.1 PFAM: Bacterial type II and III secretion system protein YP_006296118.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296119.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_006296121.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family YP_006296122.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_006296123.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006296124.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006296125.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006296126.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006296127.1 PFAM: Protein of unknown function, DUF488 YP_006296128.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_006296129.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_006296130.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_006296131.1 PFAM: RecX family YP_006296132.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_006296133.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_006296134.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_006296135.1 PFAM: YcgL domain YP_006296136.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_006296137.1 PFAM: OsmC-like protein YP_006296138.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006296139.1 PFAM: Indole-3-glycerol phosphate synthase YP_006296140.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_006296141.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_006296142.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_006296143.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_006296144.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_006296145.1 PFAM: Protein of unknown function (DUF3530) YP_006296146.1 PFAM: Spermine/spermidine synthase YP_006296147.1 PFAM: L,D-transpeptidase catalytic domain YP_006296148.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ YP_006296149.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006296150.1 PFAM: YceI-like domain YP_006296153.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_006296154.1 TIGRFAM: methyltransferase, putative YP_006296155.1 PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative YP_006296160.1 PFAM: Acetyltransferase (GNAT) family YP_006296161.1 PFAM: Citrate transporter; TrkA-C domain; Phosphate transporter family YP_006296162.1 PFAM: Lipocalin-like domain YP_006296163.1 PFAM: Ion transport protein YP_006296164.1 PFAM: Arc-like DNA binding domain YP_006296165.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296166.1 PFAM: MerC mercury resistance protein YP_006296167.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_006296168.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain YP_006296169.1 PFAM: Protein of unknown function (DUF1826) YP_006296170.1 PFAM: Protein of unknown function (DUF1826) YP_006296171.1 PFAM: Protein of unknown function (DUF2796) YP_006296172.1 PFAM: Ferric uptake regulator family YP_006296173.1 PFAM: ABC transporter YP_006296176.1 PFAM: Transposase DDE domain YP_006296177.1 PFAM: TonB dependent receptor YP_006296178.1 PFAM: Domain of unknown function (DUF3526) YP_006296179.1 PFAM: Domain of unknown function (DUF3526) YP_006296180.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain YP_006296181.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A YP_006296182.1 PFAM: Protein of unknown function (DUF3299) YP_006296183.1 PFAM: ABC transporter YP_006296184.1 PFAM: Predicted permease YP_006296187.1 PFAM: GGDEF domain; MASE1; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296192.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_006296196.1 PFAM: Mechanosensitive ion channel YP_006296197.1 PFAM: short chain dehydrogenase YP_006296198.1 PFAM: 'Cold-shock' DNA-binding domain YP_006296199.1 PFAM: Acyltransferase family YP_006296200.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296201.1 PFAM: Protein of unknown function (DUF3080) YP_006296202.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006296204.1 PFAM: Transposase DDE domain YP_006296206.1 PFAM: NADPH-dependent FMN reductase YP_006296207.1 PFAM: Protein of unknown function (DUF861) YP_006296208.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_006296209.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_006296210.1 PFAM: Protein of unknown function (DUF2845) YP_006296212.1 PFAM: HlyD family secretion protein YP_006296213.1 PFAM: ABC transporter YP_006296215.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_006296216.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006296217.1 PFAM: ABC transporter YP_006296218.1 PFAM: Predicted permease YP_006296219.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_006296221.1 PFAM: Protein of unknown function (DUF2789) YP_006296222.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II YP_006296223.1 PFAM: Protein of unknown function (DUF1232) YP_006296224.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box YP_006296225.1 PFAM: NMT1/THI5 like YP_006296226.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006296227.1 PFAM: Phosphate-starvation-inducible E YP_006296230.1 PFAM: Putative neutral zinc metallopeptidase YP_006296231.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme YP_006296232.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_006296235.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006296236.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006296237.1 PFAM: TrkA-N domain; TrkA-C domain YP_006296238.1 PFAM: LysE type translocator YP_006296243.1 PFAM: Dienelactone hydrolase family YP_006296247.1 PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain YP_006296249.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006296250.1 PFAM: von Willebrand factor type A domain YP_006296252.1 PFAM: CHASE2 domain YP_006296253.1 PFAM: Peptidase family M48 YP_006296255.1 PFAM: Dienelactone hydrolase family YP_006296256.1 PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger YP_006296257.1 PFAM: EAL domain; Phosphotransferase system, EIIC; TIGRFAM: PTS system, lactose/cellobiose family IIC component YP_006296260.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006296261.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006296262.1 PFAM: Dihydrodipicolinate synthetase family YP_006296263.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006296264.1 PFAM: NnrS protein YP_006296265.1 PFAM: Hexameric tyrosine-coordinated heme protein (HTHP) YP_006296266.1 PFAM: MarR family YP_006296268.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006296269.1 PFAM: Integrase core domain YP_006296274.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase YP_006296275.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator YP_006296277.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family YP_006296278.1 PFAM: Copper resistance protein B precursor (CopB) YP_006296279.1 PFAM: Amino acid permease YP_006296285.1 PFAM: EamA-like transporter family YP_006296286.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_006296290.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_006296294.1 PFAM: Outer membrane efflux protein YP_006296295.1 PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit YP_006296296.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_006296297.1 PFAM: Copper binding periplasmic protein CusF YP_006296299.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006296302.1 PFAM: ThiF family YP_006296307.1 PFAM: ABC transporter; Peptidase C39 family; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, HlyB family YP_006296308.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_006296310.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain YP_006296313.1 PFAM: HNH endonuclease YP_006296315.1 PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family YP_006296317.1 PFAM: Bacterial TniB protein YP_006296318.1 PFAM: Integrase core domain YP_006296324.1 PFAM: Integrase core domain YP_006296325.1 PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal YP_006296326.1 PFAM: Ribonucleotide reductase, small chain YP_006296327.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_006296329.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_006296330.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_006296331.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit YP_006296332.1 PFAM: ABC transporter YP_006296333.1 PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type YP_006296334.1 PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain YP_006296336.1 PFAM: Transposase DDE domain YP_006296342.1 PFAM: PIN domain YP_006296343.1 PFAM: Protein of unknown function (DUF2938) YP_006296344.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_006296345.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_006296346.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_006296347.1 PFAM: Uncharacterised protein family UPF0005 YP_006296349.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_006296350.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_006296351.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_006296352.1 PFAM: S4 domain YP_006296353.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_006296354.1 PFAM: Aldehyde dehydrogenase family YP_006296355.1 PFAM: AraC-type transcriptional regulator N-terminus YP_006296356.1 PFAM: Surface antigen variable number repeat; Surface antigen YP_006296357.1 PFAM: Family of unknown function (DUF490) YP_006296358.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_006296359.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_006296360.1 PFAM: Aminotransferase class I and II YP_006296361.1 PFAM: BFD-like [2Fe-2S] binding domain YP_006296362.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006296363.1 PFAM: Etoposide-induced protein 2.4 (EI24) YP_006296364.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_006296365.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_006296366.1 PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA YP_006296367.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_006296368.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain YP_006296369.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_006296370.1 PFAM: Protein of unknown function (DUF615) YP_006296371.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006296372.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006296375.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA YP_006296376.1 PFAM: Protein of unknown function, DUF481 YP_006296377.1 PFAM: Pentapeptide repeats (8 copies) YP_006296378.1 PFAM: Nitroreductase family YP_006296379.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_006296380.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain YP_006296381.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006296382.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_006296384.1 PFAM: Uncharacterised protein family (UPF0153) YP_006296386.1 PFAM: Aminopeptidase I zinc metalloprotease (M18) YP_006296390.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_006296391.1 PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain YP_006296392.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006296393.1 PFAM: AcrB/AcrD/AcrF family YP_006296394.1 PFAM: Outer membrane efflux protein YP_006296395.1 PFAM: Bacterial protein of unknown function (DUF920) YP_006296396.1 PFAM: EAL domain; HAMP domain; GGDEF domain YP_006296397.1 PFAM: Membrane transport protein YP_006296398.1 PFAM: Probable molybdopterin binding domain YP_006296399.1 PFAM: Bacterial-like globin YP_006296400.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme YP_006296403.1 PFAM: DEAD_2 YP_006296404.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2237) YP_006296405.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_006296407.1 PFAM: Phage integrase family YP_006296410.1 PFAM: Integrase core domain YP_006296413.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_006296414.1 PFAM: Methyltransferase domain YP_006296415.1 PFAM: Sulfatase YP_006296416.1 PFAM: Prokaryotic diacylglycerol kinase YP_006296417.1 PFAM: PAP2 superfamily YP_006296418.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006296419.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006296420.1 PFAM: Sulfatase; Domain of unknown function (DUF1705) YP_006296423.1 PFAM: Putative serine esterase (DUF676) YP_006296425.1 PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family YP_006296427.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit YP_006296428.1 PFAM: Type I restriction modification DNA specificity domain YP_006296429.1 PFAM: Type I restriction modification DNA specificity domain YP_006296430.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_006296431.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006296432.1 PFAM: 4Fe-4S binding domain YP_006296435.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006296436.1 PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain YP_006296441.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006296442.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006296444.1 PFAM: short chain dehydrogenase YP_006296445.1 PFAM: TENA/THI-4/PQQC family YP_006296446.1 PFAM: AMP-binding enzyme YP_006296447.1 PFAM: Thermostable hemolysin YP_006296449.1 PFAM: Sulfate transporter family; Citrate transporter; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_006296450.1 PFAM: Sulfatase YP_006296451.1 PFAM: Prokaryotic diacylglycerol kinase YP_006296452.1 PFAM: Glutathione S-transferase, C-terminal domain YP_006296454.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_006296455.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_006296456.1 PFAM: Peptidase family M48 YP_006296457.1 PFAM: LemA family YP_006296459.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_006296460.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006296461.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component YP_006296462.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component YP_006296463.1 PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296464.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006296465.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006296466.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006296467.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_006296468.1 PFAM: PilZ domain YP_006296470.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit YP_006296471.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_006296472.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_006296473.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase YP_006296474.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_006296475.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_006296476.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_006296477.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_006296478.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_006296479.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_006296480.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_006296481.1 PFAM: Uncharacterized ACR, COG1399 YP_006296482.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_006296483.1 PFAM: Colicin V production protein YP_006296484.1 PFAM: Sporulation related domain YP_006296485.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La YP_006296486.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_006296487.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_006296488.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_006296489.1 PFAM: HDOD domain YP_006296490.1 PFAM: 5'-nucleotidase YP_006296491.1 PFAM: Nuclease-related domain YP_006296492.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006296493.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006296494.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_006296496.1 PFAM: Phosphotransferase enzyme family YP_006296497.1 PFAM: Nucleotidyl transferase YP_006296498.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_006296499.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_006296501.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_006296502.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_006296503.1 PFAM: DNA polymerase III psi subunit YP_006296504.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_006296506.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_006296507.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_006296508.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_006296509.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_006296510.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type YP_006296511.1 PFAM: DJ-1/PfpI family YP_006296512.1 PFAM: PPIC-type PPIASE domain YP_006296513.1 PFAM: DEAD_2; DEAD/DEAH box helicase YP_006296514.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006296515.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family YP_006296516.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_006296518.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda YP_006296519.1 PFAM: Domain of unknown function DUF20 YP_006296520.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006296521.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2066) YP_006296522.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_006296523.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_006296524.1 PFAM: Protein of unknown function (DUF3108) YP_006296525.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family YP_006296526.1 PFAM: Aldose 1-epimerase YP_006296527.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_006296529.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_006296531.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_006296532.1 PFAM: Protein of unknown function (DUF489) YP_006296533.1 PFAM: Transposase DDE domain YP_006296534.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2 YP_006296535.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_006296538.1 PFAM: Nitroreductase family YP_006296539.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296540.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_006296541.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_006296542.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase YP_006296543.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_006296544.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type YP_006296545.1 PFAM: Ferric reductase like transmembrane component YP_006296546.1 PFAM: Oxidoreductase molybdopterin binding domain YP_006296547.1 PFAM: DoxX YP_006296549.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006296551.1 PFAM: Protein of unknown function (DUF1244) YP_006296552.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006296553.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006296554.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_006296555.1 PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2 YP_006296556.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_006296557.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_006296558.1 PFAM: Protein of unknown function (DUF330) YP_006296559.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_006296560.1 PFAM: OmpA family YP_006296561.1 PFAM: Phosphomethylpyrimidine kinase; Thiamine monophosphate synthase/TENI; TIGRFAM: phosphomethylpyrimidine kinase; thiamine-phosphate pyrophosphorylase YP_006296562.1 PFAM: Thiazole biosynthesis protein ThiG YP_006296563.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_006296564.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO YP_006296565.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_006296566.1 PFAM: Smr domain YP_006296567.1 PFAM: Predicted nucleotidyltransferase YP_006296568.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296569.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296572.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006296574.1 PFAM: Uncharacterized ACR (DUF711) YP_006296575.1 PFAM: ACT domain YP_006296579.1 PFAM: Protein of unknown function (DUF2380) YP_006296581.1 PFAM: Glutathione peroxidase YP_006296582.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_006296583.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006296584.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006296585.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006296586.1 PFAM: Patatin-like phospholipase YP_006296588.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_006296589.1 PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit YP_006296590.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit YP_006296591.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit YP_006296594.1 PFAM: S4 domain YP_006296595.1 PFAM: Bacterial regulatory protein, arsR family YP_006296596.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006296597.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_006296598.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006296599.1 TIGRFAM: DNA alkylation damage repair protein AlkB YP_006296601.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006296603.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006296604.1 PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; Transporter associated domain YP_006296605.1 PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family YP_006296606.1 PFAM: Domain of unknown function (DUF305) YP_006296607.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_006296608.1 PFAM: Peptidase S24-like YP_006296609.1 PFAM: SNARE associated Golgi protein YP_006296611.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein YP_006296612.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; Nucleotidyltransferase domain; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_006296613.1 PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family YP_006296614.1 PFAM: Type I restriction modification DNA specificity domain YP_006296615.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_006296616.1 PFAM: Fic/DOC family YP_006296617.1 PFAM: Restriction endonuclease YP_006296619.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296620.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor YP_006296621.1 PFAM: Phytase YP_006296622.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein YP_006296623.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein YP_006296624.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006296625.1 PFAM: Bacterial protein of unknown function (DUF839) YP_006296627.1 PFAM: AraC-type transcriptional regulator N-terminus YP_006296628.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_006296629.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_006296631.1 PFAM: Nucleotidyltransferase domain YP_006296634.1 PFAM: Nuclease-related domain; UvrD/REP helicase YP_006296635.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_006296636.1 PFAM: Sodium:neurotransmitter symporter family YP_006296637.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006296638.1 PFAM: Uncharacterised protein family (UPF0125) YP_006296639.1 PFAM: Protein of unknown function (DUF455) YP_006296640.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006296641.1 PFAM: Rhodanese-like domain YP_006296643.1 PFAM: Protein of unknown function (DUF692) YP_006296644.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063) YP_006296645.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_006296646.1 PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase YP_006296647.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_006296648.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_006296649.1 PFAM: AMP-binding enzyme YP_006296650.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_006296651.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_006296652.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_006296653.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_006296654.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_006296655.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_006296656.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_006296657.1 PFAM: LysM domain; TIGRFAM: FimV C-terminal domain; FimV N-terminal domain YP_006296658.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_006296659.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_006296660.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_006296661.1 PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein YP_006296662.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006296663.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006296664.1 PFAM: short chain dehydrogenase YP_006296665.1 PFAM: Sodium:dicarboxylate symporter family YP_006296667.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain YP_006296668.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_006296669.1 PFAM: Bacterial DNA-binding protein YP_006296670.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_006296671.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_006296672.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_006296673.1 PFAM: Organic solvent tolerance protein; OstA-like protein YP_006296675.1 PFAM: Predicted permease YjgP/YjgQ family YP_006296676.1 PFAM: Predicted permease YjgP/YjgQ family YP_006296677.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_006296678.1 PFAM: DNA polymerase III chi subunit, HolC YP_006296679.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_006296680.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_006296681.1 PFAM: Glucose / Sorbosone dehydrogenase YP_006296682.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB YP_006296683.1 PFAM: FAD dependent oxidoreductase YP_006296685.1 PFAM: von Willebrand factor type A domain; TIGRFAM: TIGR03503 family protein YP_006296686.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_006296687.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor YP_006296689.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_006296690.1 PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase YP_006296691.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_006296692.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase YP_006296693.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_006296694.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_006296695.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_006296696.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_006296697.1 PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_006296698.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA YP_006296699.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_006296700.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_006296701.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_006296702.1 PFAM: Inorganic pyrophosphatase YP_006296703.1 PFAM: Sulfite exporter TauE/SafE YP_006296704.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006296706.1 PFAM: RNA pseudouridylate synthase YP_006296708.1 PFAM: Macrophage migration inhibitory factor (MIF) YP_006296709.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_006296710.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_006296711.1 PFAM: Copper resistance protein D YP_006296712.1 PFAM: Transglycosylase SLT domain YP_006296713.1 PFAM: DUF218 domain YP_006296714.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family YP_006296715.1 PFAM: Protein of unknown function (DUF533) YP_006296717.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type YP_006296718.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_006296719.1 PFAM: SEC-C motif YP_006296720.1 PFAM: Acyltransferase YP_006296721.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_006296722.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_006296723.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006296724.1 PFAM: Deoxynucleoside kinase YP_006296725.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_006296726.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase YP_006296727.1 PFAM: Ribonuclease HII YP_006296728.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_006296729.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006296730.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_006296731.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_006296732.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_006296733.1 PFAM: Serine hydroxymethyltransferase YP_006296734.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_006296735.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_006296736.1 TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit YP_006296737.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2065) YP_006296738.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_006296739.1 PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_006296740.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX YP_006296741.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_006296742.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_006296743.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_006296744.1 PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family YP_006296746.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_006296747.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_006296748.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_006296749.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_006296750.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_006296751.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_006296752.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_006296753.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_006296754.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_006296755.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_006296756.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_006296757.1 PFAM: Ribosomal protein S8 YP_006296758.1 PFAM: Ribosomal protein S14p/S29e YP_006296759.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_006296760.1 TIGRFAM: ribosomal protein L24, bacterial/organelle YP_006296761.1 PFAM: Ribosomal protein L14p/L23e YP_006296762.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_006296763.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_006296764.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_006296765.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_006296766.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_006296767.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_006296768.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_006296769.1 PFAM: Ribosomal protein L23 YP_006296770.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_006296771.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_006296772.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_006296773.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_006296774.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_006296775.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_006296776.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_006296777.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_006296778.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_006296779.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_006296780.1 PFAM: Ribosomal protein L10 YP_006296781.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_006296782.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_006296783.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_006296784.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_006296785.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_006296786.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_006296787.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_006296788.1 PFAM: Protein of unknown function (DUF971) YP_006296789.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_006296790.1 PFAM: SCP-2 sterol transfer family YP_006296791.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_006296792.1 PFAM: Formate--tetrahydrofolate ligase YP_006296793.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_006296794.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase YP_006296796.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat YP_006296799.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_006296800.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_006296801.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_006296802.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_006296803.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1 YP_006296804.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006296805.1 PFAM: Flagellar hook-length control protein FliK YP_006296806.1 PFAM: Globin; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006296807.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006296808.1 PFAM: CheW-like domain YP_006296809.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain YP_006296810.1 PFAM: Response regulator receiver domain YP_006296811.1 PFAM: STAS domain YP_006296812.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_006296813.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI YP_006296814.1 PFAM: Flagellar assembly protein FliH YP_006296815.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_006296816.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_006296817.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_006296818.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006296819.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006296820.1 PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006296821.1 PFAM: Flagellar protein FliT YP_006296822.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_006296823.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif YP_006296824.1 PFAM: FlaG protein YP_006296825.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_006296826.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_006296827.1 PFAM: Glycosyl transferase family 2 YP_006296828.1 PFAM: Cephalosporin hydroxylase YP_006296829.1 TIGRFAM: methyltransferase, FkbM family YP_006296830.1 PFAM: Methyltransferase domain YP_006296831.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_006296832.1 TIGRFAM: methyltransferase, FkbM family YP_006296833.1 PFAM: Glycosyl transferases group 1 YP_006296834.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_006296835.1 PFAM: NAD dependent epimerase/dehydratase family YP_006296836.1 PFAM: C-methyltransferase; Hypothetical methyltransferase YP_006296837.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_006296838.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase YP_006296839.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase YP_006296840.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_006296841.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK YP_006296842.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ YP_006296843.1 PFAM: Flagellar P-ring protein YP_006296844.1 PFAM: Flagellar L-ring protein YP_006296845.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_006296846.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_006296847.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins YP_006296848.1 PFAM: Flagellar hook capping protein YP_006296849.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC YP_006296850.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_006296851.1 PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H YP_006296852.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain YP_006296853.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296855.1 PFAM: Neisseria PilC protein YP_006296857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006296858.1 PFAM: Transposase DDE domain YP_006296859.1 TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass) YP_006296861.1 PFAM: Bacterial regulatory proteins, tetR family YP_006296862.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_006296863.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006296864.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_006296865.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_006296866.1 PFAM: Ribonuclease BN-like family; Transcriptional regulator; TIGRFAM: YihY family protein (not ribonuclease BN) YP_006296867.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_006296869.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_006296870.1 PFAM: short chain dehydrogenase YP_006296872.1 PFAM: Transposase YP_006296873.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter YP_006296874.1 PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase YP_006296875.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter YP_006296876.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_006296877.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_006296878.1 PFAM: Protein of unknown function (DUF1022) YP_006296879.1 PFAM: Glycosyl transferases group 1 YP_006296880.1 PFAM: Glycosyl transferases group 1 YP_006296881.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_006296882.1 PFAM: O-Antigen ligase YP_006296883.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006296884.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_006296885.1 PFAM: PHP domain YP_006296886.1 PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A YP_006296887.1 PFAM: YCII-related domain YP_006296888.1 PFAM: BolA-like protein YP_006296889.1 PFAM: PilZ domain YP_006296890.1 PFAM: Putative modulator of DNA gyrase YP_006296892.1 PFAM: MoeZ/MoeB domain; ThiF family YP_006296893.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_006296894.1 PFAM: Response regulator receiver domain YP_006296895.1 PFAM: Protein of unknown function (DUF3301) YP_006296896.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_006296897.1 PFAM: Inositol monophosphatase family YP_006296898.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_006296899.1 PFAM: ZIP Zinc transporter YP_006296900.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II YP_006296901.1 PFAM: Glycosyl transferases group 1 YP_006296902.1 PFAM: O-Antigen ligase YP_006296904.1 PFAM: Carbamoyltransferase YP_006296905.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_006296906.1 PFAM: Glycosyl transferases group 1 YP_006296907.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_006296908.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_006296909.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase YP_006296910.1 PFAM: FAD dependent oxidoreductase YP_006296911.1 PFAM: Aldo/keto reductase family YP_006296913.1 PFAM: Protein of unknown function (DUF3423) YP_006296914.1 PFAM: Phd_YefM YP_006296918.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_006296919.1 PFAM: CcdB protein YP_006296920.1 PFAM: Post-segregation antitoxin CcdA YP_006296921.1 PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain YP_006296922.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I YP_006296923.1 PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type YP_006296924.1 PFAM: Protein of unknown function (DUF2782) YP_006296925.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_006296926.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006296927.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_006296928.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_006296929.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_006296930.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain YP_006296931.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_006296933.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_006296938.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit YP_006296940.1 PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit YP_006296941.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily Class (subfamily) IIA YP_006296942.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase YP_006296944.1 PFAM: Transaldolase; TIGRFAM: transaldolase YP_006296945.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase YP_006296946.1 PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase YP_006296947.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_006296948.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases YP_006296949.1 PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296950.1 PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH YP_006296951.1 PFAM: ABC transporter YP_006296952.1 PFAM: ABC-2 type transporter YP_006296953.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A YP_006296954.1 PFAM: Protein of unknown function DUF45 YP_006296955.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_006296956.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_006296957.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_006296958.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006296959.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain YP_006296960.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_006296961.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_006296962.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN YP_006296963.1 PFAM: HPr Serine kinase C-terminal domain YP_006296964.1 PFAM: PTS system fructose IIA component YP_006296965.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_006296966.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_006296967.1 PFAM: Transposase DDE domain YP_006296968.1 PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE) YP_006296969.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_006296970.1 PFAM: Major Facilitator Superfamily YP_006296971.1 PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit YP_006296972.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YP_006296973.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YP_006296974.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YP_006296975.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YP_006296976.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit YP_006296977.1 PFAM: Protein of unknown function (DUF539) YP_006296978.1 PFAM: CBS domain YP_006296979.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_006296980.1 PFAM: PAS fold; TIGRFAM: PAS domain S-box YP_006296981.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006296986.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_006296987.1 PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23 YP_006296988.1 PFAM: Uncharacterised protein family (UPF0075) YP_006296989.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_006296990.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_006296991.1 PFAM: Glycosyl hydrolase family 57 YP_006296992.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_006296993.1 PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_006296994.1 PFAM: Phosphoglucose isomerase YP_006296995.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_006296996.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006296997.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006297000.1 PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW YP_006297001.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_006297002.1 PFAM: Nucleoside diphosphate kinase YP_006297004.1 PFAM: ATP-NAD kinase YP_006297005.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_006297006.1 PFAM: Ferric uptake regulator family YP_006297007.1 PFAM: SmpA / OmlA family YP_006297008.1 PFAM: Carbonic anhydrase YP_006297009.1 PFAM: Metallo-beta-lactamase superfamily YP_006297012.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease YP_006297013.1 PFAM: PilZ domain YP_006297014.1 PFAM: Ubiquinone biosynthesis protein COQ7 YP_006297015.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297016.1 PFAM: CheW-like domain; Response regulator receiver domain YP_006297017.1 PFAM: Ribonuclease B OB domain; RNB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_006297018.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box YP_006297019.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_006297022.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_006297023.1 PFAM: Isochorismatase family YP_006297024.1 PFAM: Catalase YP_006297025.1 PFAM: Bacterial regulatory proteins, tetR family YP_006297026.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006297027.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; Glucose / Sorbosone dehydrogenase YP_006297044.1 PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST YP_006297047.1 PFAM: Type III restriction enzyme, res subunit; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_006297048.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1 YP_006297050.1 PFAM: Protein kinase domain; Protein phosphatase 2C YP_006297051.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_006297053.1 PFAM: EAL domain; EAL-domain associated signalling protein domain YP_006297054.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006297055.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_006297056.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_006297057.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297058.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006297059.1 PFAM: Nuclear transport factor 2 (NTF2) domain; TIGRFAM: conserved hypothetical protein YP_006297060.1 PFAM: MarR family YP_006297061.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006297062.1 PFAM: YcjX-like family, DUF463 YP_006297063.1 PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein YP_006297064.1 PFAM: GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006297066.1 PFAM: Peptidase C39 family YP_006297067.1 PFAM: EAL domain YP_006297068.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin YP_006297073.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006297074.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_006297076.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_006297077.1 PFAM: Methyltransferase domain YP_006297078.1 PFAM: Protein of unknown function (DUF785) YP_006297080.1 TIGRFAM: alpha-L-glutamate ligase-related protein YP_006297081.1 PFAM: Protein of unknown function (DUF541) YP_006297082.1 PFAM: Radical SAM superfamily YP_006297083.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_006297084.1 PFAM: Redoxin YP_006297085.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase YP_006297086.1 PFAM: Fructosamine kinase YP_006297087.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006297088.1 PFAM: Citrate transporter YP_006297089.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_006297090.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_006297091.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_006297092.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_006297093.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_006297094.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_006297095.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_006297096.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_006297097.1 PFAM: Domain of unknown function (DUF1841) YP_006297098.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_006297100.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter YP_006297101.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006297102.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006297103.1 PFAM: Na+/H+ ion antiporter subunit YP_006297104.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_006297105.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_006297106.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_006297110.1 PFAM: Major Facilitator Superfamily YP_006297111.1 PFAM: Transposase YP_006297112.1 PFAM: Integrase core domain YP_006297115.1 PFAM: Protein of unknown function (DUF3307) YP_006297118.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200) YP_006297120.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200) YP_006297121.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006297122.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_006297126.1 PFAM: Domain of unkown function (DUF1775) YP_006297127.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep YP_006297128.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_006297131.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006297132.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006297134.1 PFAM: Protein of unknown function, DUF481 YP_006297135.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006297136.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006297137.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE YP_006297138.1 PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein YP_006297139.1 PFAM: Protein of unknown function (DUF1255) YP_006297140.1 PFAM: Protein of unknown function (DUF526) YP_006297141.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_006297142.1 PFAM: Bacterial protein of unknown function (DUF853) YP_006297143.1 PFAM: Protein of unknown function (DUF1043) YP_006297144.1 PFAM: Uncharacterized conserved protein (DUF2075); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit YP_006297145.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit YP_006297146.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_006297149.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006297150.1 PFAM: Radical SAM superfamily YP_006297152.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006297153.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006297154.1 PFAM: Outer membrane efflux protein YP_006297156.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_006297157.1 PFAM: Protein of unknown function (DUF3240) YP_006297160.1 PFAM: Calcineurin-like phosphoesterase YP_006297161.1 PFAM: Diacylglycerol kinase catalytic domain YP_006297164.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006297168.1 PFAM: LamB/YcsF family YP_006297169.1 PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein YP_006297170.1 PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain YP_006297171.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_006297172.1 PFAM: Fructose-1-6-bisphosphatase YP_006297173.1 PFAM: Fructose-bisphosphate aldolase class-II YP_006297175.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2191) YP_006297176.1 PFAM: PIN domain YP_006297178.1 PFAM: Antibiotic biosynthesis monooxygenase YP_006297181.1 PFAM: Protein of unknown function DUF88; TIGRFAM: TIGR00288 family protein YP_006297182.1 PFAM: Uncharacterised protein family (UPF0156) YP_006297183.1 PFAM: Plasmid stabilisation system protein YP_006297184.1 TIGRFAM: addiction module antidote protein, HigA family YP_006297185.1 PFAM: Plasmid maintenance system killer protein YP_006297187.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family YP_006297188.1 PFAM: Plasmid maintenance system killer protein YP_006297190.1 PFAM: Multicopper oxidase YP_006297191.1 PFAM: Copper resistance protein B precursor (CopB) YP_006297192.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006297193.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_006297194.1 PFAM: PRC-barrel domain YP_006297196.1 PFAM: Domain of unknown function (DUF477) YP_006297197.1 PFAM: LemA family YP_006297198.1 PFAM: Protein of unknown function(DUF2089) YP_006297200.1 PFAM: EamA-like transporter family YP_006297202.1 PFAM: Acetyltransferase (GNAT) family YP_006297203.1 PFAM: Acetyltransferase (GNAT) family YP_006297205.1 PFAM: Aldo/keto reductase family YP_006297208.1 PFAM: Protein of unknown function (DUF3325) YP_006297209.1 PFAM: DNA methylase YP_006297210.1 PFAM: Fic/DOC family YP_006297211.1 PFAM: Type III restriction enzyme, res subunit YP_006297212.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006297213.1 PFAM: Hsp33 protein YP_006297215.1 PFAM: Transposase DDE domain YP_006297216.1 PFAM: Fic/DOC family YP_006297217.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_006297218.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006297219.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006297220.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_006297221.1 PFAM: Domain of unknown function (DUF897) YP_006297222.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006297224.1 PFAM: Protein of unknown function (DUF421) YP_006297225.1 PFAM: 'Cold-shock' DNA-binding domain YP_006297226.1 PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative YP_006297227.1 PFAM: Glutamine amidotransferase class-I YP_006297228.1 PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein YP_006297229.1 PFAM: Protein of unknown function (DUF3096) YP_006297231.1 PFAM: AIG2-like family YP_006297232.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase YP_006297234.1 PFAM: Protein of unknown function (DUF1311) YP_006297235.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297236.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_006297237.1 PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase YP_006297238.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_006297239.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006297240.1 PFAM: EAL domain; GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297241.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_006297242.1 PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297243.1 PFAM: Protein of unknown function (DUF328) YP_006297245.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_006297246.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_006297247.1 PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX YP_006297248.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_006297249.1 PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein YP_006297250.1 PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II YP_006297251.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding YP_006297252.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_006297253.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_006297254.1 PFAM: Protein of unknown function (DUF493) YP_006297255.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_006297256.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_006297257.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A YP_006297258.1 TIGRFAM: lytic murein transglycosylase B YP_006297259.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_006297260.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_006297261.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_006297262.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_006297263.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_006297264.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_006297265.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_006297266.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006297267.1 PFAM: AhpC/TSA family YP_006297268.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_006297269.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_006297270.1 PFAM: EAL domain; HDOD domain YP_006297271.1 PFAM: ABC transporter YP_006297273.1 PFAM: ABC-type uncharacterized transport system YP_006297275.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_006297276.1 PFAM: Cytochrome c YP_006297277.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_006297278.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_006297279.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006297280.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006297282.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1 YP_006297283.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB YP_006297284.1 PFAM: Protein of unknown function (DUF454) YP_006297285.1 PFAM: Heme oxygenase YP_006297287.1 PFAM: Protein of unknown function (DUF560) YP_006297289.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain YP_006297290.1 PFAM: FecR protein YP_006297291.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_006297293.1 PFAM: Protein of unknown function (DUF2818) YP_006297294.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_006297295.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_006297296.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_006297297.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006297298.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_006297299.1 TIGRFAM: NADH-quinone oxidoreductase, chain I YP_006297300.1 PFAM: NADH dehydrogenase YP_006297301.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G YP_006297302.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_006297303.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_006297304.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit YP_006297305.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit YP_006297306.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_006297307.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_006297308.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_006297309.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_006297311.1 PFAM: Ethanolamine utilisation protein EutQ YP_006297312.1 PFAM: Helix-turn-helix; PAS fold; TIGRFAM: PAS domain S-box YP_006297314.1 PFAM: Phage integrase family YP_006297315.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; TC 3.A.5.1.1 YP_006297316.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_006297317.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_006297318.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006297319.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_006297320.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_006297322.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_006297323.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_006297324.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_006297325.1 PFAM: Delta-aminolevulinic acid dehydratase YP_006297326.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_006297328.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006297329.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006297330.1 PFAM: Copper/zinc superoxide dismutase (SODC) YP_006297331.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006297332.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006297333.1 PFAM: MarR family YP_006297334.1 PFAM: Cell division protein ZapA YP_006297335.1 TIGRFAM: TIGR02449 family protein YP_006297336.1 PFAM: Uncharacterised protein family (UPF0149) YP_006297337.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_006297338.1 PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_006297339.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_006297342.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_006297343.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_006297344.1 PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II YP_006297345.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_006297347.1 PFAM: Protein of unknown function, DUF YP_006297348.1 PFAM: EamA-like transporter family YP_006297349.1 PFAM: DEAD/DEAH box helicase YP_006297351.1 PFAM: Phosphoenolpyruvate carboxylase YP_006297352.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_006297353.1 PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_006297354.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor YP_006297355.1 PFAM: Flagellar basal body-associated protein FliL YP_006297356.1 PFAM: Flagellar basal body-associated protein FliL YP_006297357.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_006297358.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_006297359.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO YP_006297360.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_006297361.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_006297362.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_006297363.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB YP_006297364.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_006297365.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF YP_006297366.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006297367.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_006297368.1 PFAM: Response regulator receiver domain YP_006297369.1 PFAM: Chemotaxis phosphatase, CheZ YP_006297370.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_006297371.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_006297372.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006297373.1 PFAM: OmpA family YP_006297374.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006297375.1 PFAM: CheW-like domain YP_006297376.1 PFAM: CheW-like domain YP_006297378.1 PFAM: Protein of unknown function (DUF2802) YP_006297379.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein YP_006297380.1 PFAM: Flagellar hook-length control protein FliK YP_006297381.1 PFAM: Pentapeptide repeats (8 copies) YP_006297382.1 PFAM: Protein of unknown function (DUF525) YP_006297383.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type YP_006297384.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase YP_006297385.1 PFAM: Protein of unknown function (DUF541) YP_006297386.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form YP_006297387.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase YP_006297388.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family YP_006297389.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein YP_006297390.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062) YP_006297391.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_006297392.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006297393.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006297394.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA YP_006297395.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_006297396.1 PFAM: Trm112p-like protein YP_006297397.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_006297399.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_006297400.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_006297401.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_006297402.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_006297404.1 PFAM: HDOD domain YP_006297405.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_006297406.1 PFAM: pfkB family carbohydrate kinase YP_006297407.1 PFAM: Rieske [2Fe-2S] domain YP_006297408.1 PFAM: Putative ATPase (DUF699); Domain of unknown function (DUF1726) YP_006297409.1 PFAM: SlyX YP_006297410.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_006297411.1 PFAM: SPFH domain / Band 7 family YP_006297412.1 PFAM: NfeD-like YP_006297414.1 PFAM: Cytochrome P450 YP_006297417.1 PFAM: Domain of unknown function (DUF2383) YP_006297418.1 PFAM: Domain of Unknown Function (DUF326) YP_006297419.1 PFAM: CBS domain YP_006297421.1 PFAM: short chain dehydrogenase YP_006297422.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006297424.1 PFAM: Late embryogenesis abundant protein YP_006297427.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_006297428.1 PFAM: MarR family; AsnC family YP_006297429.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family YP_006297430.1 PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase YP_006297432.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein YP_006297435.1 PFAM: Exopolysaccharide synthesis, ExoD YP_006297436.1 PFAM: Sodium Bile acid symporter family YP_006297438.1 PFAM: Mechanosensitive ion channel YP_006297439.1 PFAM: PhoH-like protein YP_006297440.1 PFAM: PilZ domain YP_006297441.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006297442.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_006297443.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC YP_006297444.1 TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH YP_006297445.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase YP_006297446.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase YP_006297447.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_006297448.1 PFAM: Protein of unknown function, DUF484; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006297449.1 PFAM: Protein of unknown function (DUF1538) YP_006297451.1 PFAM: CBS domain YP_006297452.1 PFAM: Staphylococcal nuclease homologue YP_006297453.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial YP_006297454.1 PFAM: Chorismate lyase YP_006297455.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_006297456.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006297457.1 PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_006297458.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_006297459.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_006297460.1 PFAM: Bacterial extracellular solute-binding protein YP_006297461.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006297462.1 PFAM: ABC transporter; TOBE domain YP_006297465.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; Type III restriction enzyme, res subunit YP_006297469.1 PFAM: SEC-C motif YP_006297473.1 PFAM: Transposase DDE domain YP_006297475.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_006297476.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_006297477.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_006297478.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_006297481.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_006297482.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain YP_006297483.1 PFAM: Aminotransferase class I and II YP_006297485.1 PFAM: HDOD domain YP_006297486.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006297487.1 PFAM: Protein of unknown function (DUF519) YP_006297488.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006297489.1 PFAM: short chain dehydrogenase YP_006297490.1 PFAM: AhpC/TSA family YP_006297492.1 PFAM: Protein of unknown function (DUF1228); Major Facilitator Superfamily YP_006297497.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_006297499.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_006297501.1 PFAM: NlpC/P60 family YP_006297503.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Erythromycin esterase; TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_006297504.1 PFAM: Protein of unknown function (DUF3617) YP_006297505.1 PFAM: MAPEG family YP_006297506.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006297507.1 PFAM: HDOD domain YP_006297508.1 PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG YP_006297509.1 PFAM: Transposase DDE domain YP_006297511.1 PFAM: ABC-2 type transporter YP_006297512.1 PFAM: ABC transporter YP_006297515.1 PFAM: Transposase DDE domain YP_006297516.1 PFAM: Protein of unknown function (DUF3144) YP_006297518.1 PFAM: Amino acid permease YP_006297519.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_006297520.1 PFAM: Phosphotransferase enzyme family YP_006297521.1 PFAM: Transposase DDE domain YP_006297522.1 PFAM: Integrase core domain YP_006297523.1 PFAM: Transposase YP_006297524.1 PFAM: Peptidase family U32 YP_006297525.1 PFAM: Transposase DDE domain