-- dump date 20140619_145158 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_006294508.1 387125903 12846688 complement(309..977) 1 NC_017857.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; queuosine biosynthesis protein QueC 977 12846688 Q7A_2 Methylophaga nitratireducenticrescens queuosine biosynthesis protein QueC YP_006294508.1 309 R 754476 CDS YP_006294509.1 387125904 12845297 complement(974..1615) 1 NC_017857.1 PFAM: Radical SAM superfamily; queuosine biosynthesis radical SAM protein QueE 1615 12845297 Q7A_3 Methylophaga nitratireducenticrescens queuosine biosynthesis radical SAM protein QueE YP_006294509.1 974 R 754476 CDS YP_006294510.1 387125905 12845513 complement(1639..2469) 1 NC_017857.1 PFAM: Tetratricopeptide repeat; TIGRFAM: tol-pal system protein YbgF; hypothetical protein 2469 12845513 Q7A_4 Methylophaga nitratireducenticrescens hypothetical protein YP_006294510.1 1639 R 754476 CDS YP_006294511.1 387125906 12845514 complement(2471..3040) 1 NC_017857.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein 3040 12845514 Q7A_5 Methylophaga nitratireducenticrescens peptidoglycan-associated outer membrane lipoprotein YP_006294511.1 2471 R 754476 CDS YP_006294512.1 387125907 12845515 complement(3062..4363) 1 NC_017857.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB; tolB protein precursor 4363 12845515 Q7A_6 Methylophaga nitratireducenticrescens tolB protein precursor YP_006294512.1 3062 R 754476 CDS YP_006294513.1 387125908 12845516 complement(4375..5151) 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TolA protein 5151 12845516 Q7A_7 Methylophaga nitratireducenticrescens TolA protein YP_006294513.1 4375 R 754476 CDS YP_006294514.1 387125909 12845517 complement(5463..5909) 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TolR protein 5909 12845517 Q7A_8 Methylophaga nitratireducenticrescens TolR protein YP_006294514.1 5463 R 754476 CDS YP_006294515.1 387125910 12846546 complement(5924..6592) 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; motA/TolQ/ExbB proton channel family protein 6592 12846546 Q7A_9 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006294515.1 5924 R 754476 CDS YP_006294516.1 387125911 12846714 complement(6582..6986) 1 NC_017857.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 6986 12846714 Q7A_10 Methylophaga nitratireducenticrescens 4-hydroxybenzoyl-CoA thioesterase YP_006294516.1 6582 R 754476 CDS YP_006294517.1 387125912 12846715 complement(6986..7999) 1 NC_017857.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase RuvB 7999 12846715 Q7A_11 Methylophaga nitratireducenticrescens Holliday junction DNA helicase RuvB YP_006294517.1 6986 R 754476 CDS YP_006294518.1 387125913 12846716 complement(8002..8598) 1 NC_017857.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase RuvA 8598 12846716 Q7A_12 Methylophaga nitratireducenticrescens Holliday junction DNA helicase RuvA YP_006294518.1 8002 R 754476 CDS YP_006294519.1 387125914 12846717 complement(8595..9134) 1 NC_017857.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease RuvC 9134 12846717 Q7A_13 Methylophaga nitratireducenticrescens Crossover junction endodeoxyribonuclease RuvC YP_006294519.1 8595 R 754476 CDS YP_006294520.1 387125915 12846718 complement(9149..9898) 1 NC_017857.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; DNA-binding regulatory protein 9898 12846718 Q7A_14 Methylophaga nitratireducenticrescens DNA-binding regulatory protein YP_006294520.1 9149 R 754476 CDS YP_006294521.1 387125916 12846719 complement(9946..10860) 1 NC_017857.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; branched-chain amino acid aminotransferase 10860 12846719 Q7A_15 Methylophaga nitratireducenticrescens branched-chain amino acid aminotransferase YP_006294521.1 9946 R 754476 CDS YP_006294522.1 387125917 12846720 complement(10918..13761) 1 NC_017857.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase 13761 12846720 Q7A_16 Methylophaga nitratireducenticrescens glutamate-ammonia-ligase adenylyltransferase YP_006294522.1 10918 R 754476 CDS YP_006294523.1 387125918 12846721 14085..14453 1 NC_017857.1 hypothetical protein 14453 12846721 Q7A_17 Methylophaga nitratireducenticrescens hypothetical protein YP_006294523.1 14085 D 754476 CDS YP_006294524.1 387125919 12846722 complement(14543..16171) 1 NC_017857.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; Heat shock protein 60 family chaperone GroEL 16171 12846722 Q7A_18 Methylophaga nitratireducenticrescens Heat shock protein 60 family chaperone GroEL YP_006294524.1 14543 R 754476 CDS YP_006294525.1 387125920 12846723 complement(16229..16519) 1 NC_017857.1 PFAM: Chaperonin 10 Kd subunit; Heat shock protein 60 family co-chaperone GroES 16519 12846723 Q7A_19 Methylophaga nitratireducenticrescens Heat shock protein 60 family co-chaperone GroES YP_006294525.1 16229 R 754476 CDS YP_006294526.1 387125921 12846724 complement(16667..17122) 1 NC_017857.1 PFAM: FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 17122 12846724 Q7A_20 Methylophaga nitratireducenticrescens FxsA cytoplasmic membrane protein YP_006294526.1 16667 R 754476 CDS YP_006294527.1 387125922 12846725 17351..18703 1 NC_017857.1 PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 18703 12846725 Q7A_21 Methylophaga nitratireducenticrescens phosphate-selective porin O and P YP_006294527.1 17351 D 754476 CDS YP_006294528.1 387125923 12846726 18797..20587 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 20587 12846726 Q7A_22 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006294528.1 18797 D 754476 CDS YP_006294529.1 387125924 12846727 complement(20621..21043) 1 NC_017857.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); Arsenate reductase 21043 12846727 Q7A_23 Methylophaga nitratireducenticrescens Arsenate reductase YP_006294529.1 20621 R 754476 CDS YP_006294530.1 387125925 12846728 21216..21893 1 NC_017857.1 SH3 domain; hypothetical protein 21893 12846728 Q7A_24 Methylophaga nitratireducenticrescens hypothetical protein YP_006294530.1 21216 D 754476 CDS YP_006294531.1 387125926 12846729 complement(21935..22480) 1 NC_017857.1 PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase protein 22480 12846729 Q7A_25 Methylophaga nitratireducenticrescens pyridoxamine 5'-phosphate oxidase protein YP_006294531.1 21935 R 754476 CDS YP_006294532.1 387125927 12846730 23104..23226 1 NC_017857.1 hypothetical protein 23226 12846730 Q7A_26 Methylophaga nitratireducenticrescens hypothetical protein YP_006294532.1 23104 D 754476 CDS YP_006294533.1 387125928 12846731 23417..25201 1 NC_017857.1 PFAM: ABC transporter transmembrane region; ABC transporter; ATP-binding/permease fusion ABC transporter-like protein 25201 12846731 Q7A_27 Methylophaga nitratireducenticrescens ATP-binding/permease fusion ABC transporter-like protein YP_006294533.1 23417 D 754476 CDS YP_006294534.1 387125929 12846732 complement(25535..27388) 1 NC_017857.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 27388 12846732 Q7A_28 Methylophaga nitratireducenticrescens dihydroxy-acid dehydratase YP_006294534.1 25535 R 754476 CDS YP_006294535.1 387125930 12846733 27511..28806 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase; N-acetylglutamate synthase 28806 12846733 Q7A_29 Methylophaga nitratireducenticrescens N-acetylglutamate synthase YP_006294535.1 27511 D 754476 CDS YP_006294536.1 387125931 12846734 complement(28803..29318) 1 NC_017857.1 PFAM: NUDIX domain; adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 29318 12846734 Q7A_30 Methylophaga nitratireducenticrescens adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase YP_006294536.1 28803 R 754476 CDS YP_006294537.1 387125932 12846735 29467..30123 1 NC_017857.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase 30123 12846735 Q7A_31 Methylophaga nitratireducenticrescens phosphoserine phosphatase YP_006294537.1 29467 D 754476 CDS YP_006294538.1 387125933 12846736 30170..31612 1 NC_017857.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B 31612 12846736 Q7A_32 Methylophaga nitratireducenticrescens Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B YP_006294538.1 30170 D 754476 CDS YP_006294539.1 387125934 12846737 31820..32962 1 NC_017857.1 PFAM: FIST C domain; FIST N domain; hypothetical protein 32962 12846737 Q7A_33 Methylophaga nitratireducenticrescens hypothetical protein YP_006294539.1 31820 D 754476 CDS YP_006294540.1 387125935 12846738 complement(32982..34256) 1 NC_017857.1 PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family; glutamate--cysteine ligase 34256 12846738 Q7A_34 Methylophaga nitratireducenticrescens glutamate--cysteine ligase YP_006294540.1 32982 R 754476 CDS YP_006294541.1 387125936 12846739 complement(34336..34452) 1 NC_017857.1 hypothetical protein 34452 12846739 Q7A_35 Methylophaga nitratireducenticrescens hypothetical protein YP_006294541.1 34336 R 754476 CDS YP_006294542.1 387125937 12846740 34944..35312 1 NC_017857.1 PFAM: Response regulator receiver domain; twitching motility protein PilG 35312 12846740 Q7A_36 Methylophaga nitratireducenticrescens twitching motility protein PilG YP_006294542.1 34944 D 754476 CDS YP_006294543.1 387125938 12846741 35320..35691 1 NC_017857.1 PFAM: Response regulator receiver domain; twitching motility protein PilH 35691 12846741 Q7A_37 Methylophaga nitratireducenticrescens twitching motility protein PilH YP_006294543.1 35320 D 754476 CDS YP_006294544.1 387125939 12846742 35688..36236 1 NC_017857.1 PFAM: CheW-like domain; type IV pili signal transduction protein PilI 36236 12846742 Q7A_38 Methylophaga nitratireducenticrescens type IV pili signal transduction protein PilI YP_006294544.1 35688 D 754476 CDS YP_006294545.1 387125940 12846743 36261..37523 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; type IV pilus biogenesis protein PilJ 37523 12846743 Q7A_39 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilJ YP_006294545.1 36261 D 754476 CDS YP_006294546.1 387125941 12846744 37552..43257 1 NC_017857.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 43257 12846744 Q7A_40 Methylophaga nitratireducenticrescens signal transduction histidine kinase YP_006294546.1 37552 D 754476 CDS YP_006294547.1 387125942 12846745 43280..43765 1 NC_017857.1 PFAM: CheW-like domain; hypothetical protein 43765 12846745 Q7A_41 Methylophaga nitratireducenticrescens hypothetical protein YP_006294547.1 43280 D 754476 CDS YP_006294548.1 387125943 12846746 43775..45718 1 NC_017857.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 45718 12846746 Q7A_42 Methylophaga nitratireducenticrescens lytic murein transglycosylase YP_006294548.1 43775 D 754476 CDS YP_006294549.1 387125944 12846747 45728..46969 1 NC_017857.1 PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase 46969 12846747 Q7A_43 Methylophaga nitratireducenticrescens tRNA nucleotidyltransferase YP_006294549.1 45728 D 754476 CDS YP_006294550.1 387125945 12846748 47032..48015 1 NC_017857.1 PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 48015 12846748 Q7A_44 Methylophaga nitratireducenticrescens N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase YP_006294550.1 47032 D 754476 CDS YP_006294551.1 387125946 12846749 48025..48951 1 NC_017857.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; S6 modification enzyme RimK 48951 12846749 Q7A_45 Methylophaga nitratireducenticrescens S6 modification enzyme RimK YP_006294551.1 48025 D 754476 CDS YP_006294552.1 387125947 12846750 48941..49819 1 NC_017857.1 PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; Triphosphoribosyl-dephospho-CoA synthetase 49819 12846750 Q7A_46 Methylophaga nitratireducenticrescens Triphosphoribosyl-dephospho-CoA synthetase YP_006294552.1 48941 D 754476 CDS YP_006294553.1 387125948 12846751 49938..50456 1 NC_017857.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 50456 12846751 Q7A_47 Methylophaga nitratireducenticrescens formaldehyde activating enzyme YP_006294553.1 49938 D 754476 CDS YP_006294554.1 387125949 12846752 complement(50498..51193) 1 NC_017857.1 PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; histidine biosynthesis protein 51193 12846752 Q7A_48 Methylophaga nitratireducenticrescens histidine biosynthesis protein YP_006294554.1 50498 R 754476 CDS YP_006294555.1 387125950 12846753 51303..51491 1 NC_017857.1 hypothetical protein 51491 12846753 Q7A_49 Methylophaga nitratireducenticrescens hypothetical protein YP_006294555.1 51303 D 754476 CDS YP_006294556.1 387125951 12846754 51452..52210 1 NC_017857.1 PFAM: ATP-grasp domain; ATP-utilizing enzyme 52210 12846754 Q7A_50 Methylophaga nitratireducenticrescens ATP-utilizing enzyme YP_006294556.1 51452 D 754476 CDS YP_006294557.1 387125952 12846755 52203..53246 1 NC_017857.1 TIGRFAM: probable H4MPT-linked C1 transfer pathway protein; H4MPT-linked C1 transfer pathway-like protein 53246 12846755 Q7A_51 Methylophaga nitratireducenticrescens H4MPT-linked C1 transfer pathway-like protein YP_006294557.1 52203 D 754476 CDS YP_006294558.1 387125953 12846756 53256..54641 1 NC_017857.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; aminodeoxychorismate synthase, component I, clade 2; Para-aminobenzoate synthase 54641 12846756 Q7A_52 Methylophaga nitratireducenticrescens Para-aminobenzoate synthase YP_006294558.1 53256 D 754476 CDS YP_006294559.1 387125954 12846757 54642..55217 1 NC_017857.1 PFAM: Amino acid kinase family; delta 1-pyrroline-5-carboxylate synthetase 55217 12846757 Q7A_53 Methylophaga nitratireducenticrescens delta 1-pyrroline-5-carboxylate synthetase YP_006294559.1 54642 D 754476 CDS YP_006294560.1 387125955 12846758 55214..56395 1 NC_017857.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain; pyridoxal-dependent decarboxylase 56395 12846758 Q7A_54 Methylophaga nitratireducenticrescens pyridoxal-dependent decarboxylase YP_006294560.1 55214 D 754476 CDS YP_006294561.1 387125956 12846759 complement(56370..58073) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); peptidoglycan-binding domain 1 58073 12846759 Q7A_55 Methylophaga nitratireducenticrescens peptidoglycan-binding domain 1 YP_006294561.1 56370 R 754476 CDS YP_006294562.1 387125957 12846760 complement(58082..59170) 1 NC_017857.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 59170 12846760 Q7A_56 Methylophaga nitratireducenticrescens 3-dehydroquinate synthase YP_006294562.1 58082 R 754476 CDS YP_006294563.1 387125958 12846761 complement(59173..59676) 1 NC_017857.1 PFAM: Shikimate kinase; shikimate kinase 59676 12846761 Q7A_57 Methylophaga nitratireducenticrescens shikimate kinase YP_006294563.1 59173 R 754476 CDS YP_006294564.1 387125959 12846762 59645..59815 1 NC_017857.1 hypothetical protein 59815 12846762 Q7A_58 Methylophaga nitratireducenticrescens hypothetical protein YP_006294564.1 59645 D 754476 CDS YP_006294565.1 387125960 12846763 complement(59793..61928) 1 NC_017857.1 PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus biogenesis protein PilQ 61928 12846763 Q7A_59 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilQ YP_006294565.1 59793 R 754476 CDS YP_006294566.1 387125961 12846764 complement(61981..62529) 1 NC_017857.1 PFAM: Pilus assembly protein, PilP; type IV pilus biogenesis protein PilP 62529 12846764 Q7A_60 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilP YP_006294566.1 61981 R 754476 CDS YP_006294567.1 387125962 12846765 complement(62529..63116) 1 NC_017857.1 PFAM: Pilus assembly protein, PilO; type IV pilus biogenesis protein PilO 63116 12846765 Q7A_61 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilO YP_006294567.1 62529 R 754476 CDS YP_006294568.1 387125963 12846766 complement(63119..63679) 1 NC_017857.1 PFAM: Fimbrial assembly protein (PilN); type IV pilus biogenesis protein PilN 63679 12846766 Q7A_62 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilN YP_006294568.1 63119 R 754476 CDS YP_006294569.1 387125964 12846767 complement(63679..64737) 1 NC_017857.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus biogenesis protein PilM 64737 12846767 Q7A_63 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilM YP_006294569.1 63679 R 754476 CDS YP_006294570.1 387125965 12846768 64938..67325 1 NC_017857.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; multimodular transpeptidase-transglycosylase 67325 12846768 Q7A_64 Methylophaga nitratireducenticrescens multimodular transpeptidase-transglycosylase YP_006294570.1 64938 D 754476 CDS YP_006294571.1 387125966 12846769 complement(67473..68570) 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 68570 12846769 Q7A_65 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006294571.1 67473 R 754476 CDS YP_006294572.1 387125967 12846770 68647..69816 1 NC_017857.1 PFAM: NnrS protein; NnrS protein 69816 12846770 Q7A_66 Methylophaga nitratireducenticrescens NnrS protein YP_006294572.1 68647 D 754476 CDS YP_006294573.1 387125968 12846771 69826..70263 1 NC_017857.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR 70263 12846771 Q7A_67 Methylophaga nitratireducenticrescens nitrite-sensitive transcriptional repressor NsrR YP_006294573.1 69826 D 754476 CDS YP_006294574.1 387125969 12846772 complement(70285..70959) 1 NC_017857.1 PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein; nitric oxide-dependent regulator DnrN or NorA 70959 12846772 Q7A_68 Methylophaga nitratireducenticrescens nitric oxide-dependent regulator DnrN or NorA YP_006294574.1 70285 R 754476 CDS YP_006294575.1 387125970 12846773 71392..71517 1 NC_017857.1 hypothetical protein 71517 12846773 Q7A_69 Methylophaga nitratireducenticrescens hypothetical protein YP_006294575.1 71392 D 754476 CDS YP_006294576.1 387125971 12846774 complement(71848..73323) 1 NC_017857.1 PFAM: Peptidase family M48; Zn-dependent protease 73323 12846774 Q7A_70 Methylophaga nitratireducenticrescens Zn-dependent protease YP_006294576.1 71848 R 754476 CDS YP_006294577.1 387125972 12846775 complement(73351..73551) 1 NC_017857.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 73551 12846775 Q7A_71 Methylophaga nitratireducenticrescens 50S ribosomal protein L31 YP_006294577.1 73351 R 754476 CDS YP_006294578.1 387125973 12846776 complement(73675..74250) 1 NC_017857.1 PFAM: Tellurite resistance protein TehB; type 12 methyltransferase 74250 12846776 Q7A_72 Methylophaga nitratireducenticrescens type 12 methyltransferase YP_006294578.1 73675 R 754476 CDS YP_006294579.1 387125974 12846777 complement(74250..75701) 1 NC_017857.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Potassium uptake protein TrkH 75701 12846777 Q7A_73 Methylophaga nitratireducenticrescens Potassium uptake protein TrkH YP_006294579.1 74250 R 754476 CDS YP_006294580.1 387125975 12846778 complement(75708..77219) 1 NC_017857.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 77219 12846778 Q7A_74 Methylophaga nitratireducenticrescens apolipoprotein N-acyltransferase YP_006294580.1 75708 R 754476 CDS YP_006294581.1 387125976 12846779 complement(77219..78088) 1 NC_017857.1 PFAM: CBS domain; Transporter associated domain; magnesium and cobalt efflux protein CorC 78088 12846779 Q7A_75 Methylophaga nitratireducenticrescens magnesium and cobalt efflux protein CorC YP_006294581.1 77219 R 754476 CDS YP_006294582.1 387125977 12846780 complement(78085..78549) 1 NC_017857.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metal-dependent hydrolase 78549 12846780 Q7A_76 Methylophaga nitratireducenticrescens metal-dependent hydrolase YP_006294582.1 78085 R 754476 CDS YP_006294583.1 387125978 12846781 complement(78546..79520) 1 NC_017857.1 PFAM: PhoH-like protein; phosphate starvation-inducible ATPase 79520 12846781 Q7A_77 Methylophaga nitratireducenticrescens phosphate starvation-inducible ATPase YP_006294583.1 78546 R 754476 CDS YP_006294584.1 387125979 12846782 complement(79542..80909) 1 NC_017857.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 methylthiotransferase 80909 12846782 Q7A_78 Methylophaga nitratireducenticrescens tRNA-i(6)A37 methylthiotransferase YP_006294584.1 79542 R 754476 CDS YP_006294585.1 387125980 12846783 complement(81059..81190) 1 NC_017857.1 hypothetical protein 81190 12846783 Q7A_79 Methylophaga nitratireducenticrescens hypothetical protein YP_006294585.1 81059 R 754476 CDS YP_006294586.1 387125981 12846784 complement(81303..81434) 1 NC_017857.1 hypothetical protein 81434 12846784 Q7A_80 Methylophaga nitratireducenticrescens hypothetical protein YP_006294586.1 81303 R 754476 CDS YP_006294587.1 387125982 12846785 81471..81905 1 NC_017857.1 PFAM: Domain of unknown function (DUF336); hypothetical protein 81905 12846785 Q7A_81 Methylophaga nitratireducenticrescens hypothetical protein YP_006294587.1 81471 D 754476 CDS YP_006294588.1 387125983 12846786 complement(82039..82797) 1 NC_017857.1 PFAM: Thrombospondin C-terminal region; thrombospondin 82797 12846786 Q7A_82 Methylophaga nitratireducenticrescens thrombospondin YP_006294588.1 82039 R 754476 CDS YP_006294589.1 387125984 12846787 83109..84851 1 NC_017857.1 PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; hypothetical protein 84851 12846787 Q7A_83 Methylophaga nitratireducenticrescens hypothetical protein YP_006294589.1 83109 D 754476 CDS YP_006294590.1 387125985 12846788 complement(84935..86509) 1 NC_017857.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; KefB-like protein 86509 12846788 Q7A_84 Methylophaga nitratireducenticrescens KefB-like protein YP_006294590.1 84935 R 754476 CDS YP_006294591.1 387125986 12846789 complement(86665..86961) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1840); hypothetical protein 86961 12846789 Q7A_85 Methylophaga nitratireducenticrescens hypothetical protein YP_006294591.1 86665 R 754476 CDS YP_006294592.1 387125987 12846790 complement(86983..87108) 1 NC_017857.1 hypothetical protein 87108 12846790 Q7A_86 Methylophaga nitratireducenticrescens hypothetical protein YP_006294592.1 86983 R 754476 CDS YP_006294593.1 387125988 12846791 complement(87209..87529) 1 NC_017857.1 hypothetical protein 87529 12846791 Q7A_87 Methylophaga nitratireducenticrescens hypothetical protein YP_006294593.1 87209 R 754476 CDS YP_006294594.1 387125989 12846792 complement(87646..87918) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1971); hypothetical protein 87918 12846792 Q7A_88 Methylophaga nitratireducenticrescens hypothetical protein YP_006294594.1 87646 R 754476 CDS YP_006294595.1 387125990 12846793 complement(88054..88665) 1 NC_017857.1 PFAM: Uracil DNA glycosylase superfamily; uracil-DNA glycosylase 88665 12846793 Q7A_89 Methylophaga nitratireducenticrescens uracil-DNA glycosylase YP_006294595.1 88054 R 754476 CDS YP_006294596.1 387125991 12846794 complement(88706..88960) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1488); hypothetical protein 88960 12846794 Q7A_90 Methylophaga nitratireducenticrescens hypothetical protein YP_006294596.1 88706 R 754476 CDS YP_006294597.1 387125992 12846795 89147..90433 1 NC_017857.1 PFAM: MgtC family; hypothetical protein 90433 12846795 Q7A_91 Methylophaga nitratireducenticrescens hypothetical protein YP_006294597.1 89147 D 754476 CDS YP_006294598.1 387125993 12846796 complement(90673..92136) 1 NC_017857.1 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 92136 12846796 Q7A_92 Methylophaga nitratireducenticrescens phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase YP_006294598.1 90673 R 754476 CDS YP_006294599.1 387125994 12846797 92448..94286 1 NC_017857.1 PFAM: Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase 94286 12846797 Q7A_93 Methylophaga nitratireducenticrescens Calcineurin-like phosphoesterase YP_006294599.1 92448 D 754476 CDS YP_006294600.1 387125995 12846798 94502..95557 1 NC_017857.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter 95557 12846798 Q7A_94 Methylophaga nitratireducenticrescens phosphate ABC transporter YP_006294600.1 94502 D 754476 CDS YP_006294601.1 387125996 12846799 complement(95619..96626) 1 NC_017857.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN 96626 12846799 Q7A_95 Methylophaga nitratireducenticrescens ribonuclease BN YP_006294601.1 95619 R 754476 CDS YP_006294602.1 387125997 12846800 complement(96694..96912) 1 NC_017857.1 hypothetical protein 96912 12846800 Q7A_96 Methylophaga nitratireducenticrescens hypothetical protein YP_006294602.1 96694 R 754476 CDS YP_006294603.1 387125998 12846801 complement(97263..98207) 1 NC_017857.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase 98207 12846801 Q7A_97 Methylophaga nitratireducenticrescens malate dehydrogenase YP_006294603.1 97263 R 754476 CDS YP_006294604.1 387125999 12846802 complement(98311..98649) 1 NC_017857.1 hypothetical protein 98649 12846802 Q7A_98 Methylophaga nitratireducenticrescens hypothetical protein YP_006294604.1 98311 R 754476 CDS YP_006294605.1 387126000 12846803 complement(98825..99340) 1 NC_017857.1 hypothetical protein 99340 12846803 Q7A_99 Methylophaga nitratireducenticrescens hypothetical protein YP_006294605.1 98825 R 754476 CDS YP_006294606.1 387126001 12846804 complement(99517..100032) 1 NC_017857.1 PFAM: Phosphate-starvation-inducible E; hypothetical protein 100032 12846804 Q7A_100 Methylophaga nitratireducenticrescens hypothetical protein YP_006294606.1 99517 R 754476 CDS YP_006294607.1 387126002 12846805 complement(100233..100958) 1 NC_017857.1 PFAM: MOSC domain; hypothetical protein 100958 12846805 Q7A_101 Methylophaga nitratireducenticrescens hypothetical protein YP_006294607.1 100233 R 754476 CDS YP_006294608.1 387126003 12846806 complement(100973..101125) 1 NC_017857.1 hypothetical protein 101125 12846806 Q7A_102 Methylophaga nitratireducenticrescens hypothetical protein YP_006294608.1 100973 R 754476 CDS YP_006294609.1 387126004 12846807 complement(101510..102673) 1 NC_017857.1 PFAM: Cytochrome P450; cytochrome P450 hydroxylase 102673 12846807 Q7A_103 Methylophaga nitratireducenticrescens cytochrome P450 hydroxylase YP_006294609.1 101510 R 754476 CDS YP_006294610.1 387126005 12846808 103179..103853 1 NC_017857.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 103853 12846808 Q7A_104 Methylophaga nitratireducenticrescens DNA repair protein RadC YP_006294610.1 103179 D 754476 CDS YP_006294611.1 387126006 12846810 106088..107224 1 NC_017857.1 PFAM: Peptidase propeptide and YPEB domain; Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB; hypothetical protein 107224 12846810 Q7A_107 Methylophaga nitratireducenticrescens hypothetical protein YP_006294611.1 106088 D 754476 CDS YP_006294612.1 387126007 12846811 complement(107233..107967) 1 NC_017857.1 PFAM: Prokaryotic cytochrome b561; cytochrome b 107967 12846811 Q7A_108 Methylophaga nitratireducenticrescens cytochrome b YP_006294612.1 107233 R 754476 CDS YP_006294613.1 387126008 12846812 complement(108065..108496) 1 NC_017857.1 TIGRFAM: hemerythrin-like metal-binding domain; methyl-accepting chemotaxis protein 108496 12846812 Q7A_109 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006294613.1 108065 R 754476 CDS YP_006294614.1 387126009 12846813 complement(108498..109331) 1 NC_017857.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase 109331 12846813 Q7A_110 Methylophaga nitratireducenticrescens thymidylate synthase YP_006294614.1 108498 R 754476 CDS YP_006294615.1 387126010 12846814 complement(109459..110397) 1 NC_017857.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; sigma-54-dependent transcriptional regulator 110397 12846814 Q7A_111 Methylophaga nitratireducenticrescens sigma-54-dependent transcriptional regulator YP_006294615.1 109459 R 754476 CDS YP_006294616.1 387126011 12846815 complement(110440..111168) 1 NC_017857.1 PFAM: Cytochrome C biogenesis protein transmembrane region; Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein; hypothetical protein 111168 12846815 Q7A_112 Methylophaga nitratireducenticrescens hypothetical protein YP_006294616.1 110440 R 754476 CDS YP_006294617.1 387126012 12846816 111597..112001 1 NC_017857.1 PFAM: Cytochrome c; cytochrome c 112001 12846816 Q7A_113 Methylophaga nitratireducenticrescens cytochrome c YP_006294617.1 111597 D 754476 CDS YP_006294618.1 387126013 12846817 complement(112050..112583) 1 NC_017857.1 hypothetical protein 112583 12846817 Q7A_114 Methylophaga nitratireducenticrescens hypothetical protein YP_006294618.1 112050 R 754476 CDS YP_006294619.1 387126014 12846818 complement(112639..114144) 1 NC_017857.1 PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; exopolyphosphatase 114144 12846818 Q7A_115 Methylophaga nitratireducenticrescens exopolyphosphatase YP_006294619.1 112639 R 754476 CDS YP_006294620.1 387126015 12846819 complement(114279..114995) 1 NC_017857.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate transport system regulatory protein PhoU 114995 12846819 Q7A_116 Methylophaga nitratireducenticrescens phosphate transport system regulatory protein PhoU YP_006294620.1 114279 R 754476 CDS YP_006294621.1 387126016 12846820 complement(115019..115861) 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate transport ATP-binding protein 115861 12846820 Q7A_117 Methylophaga nitratireducenticrescens phosphate transport ATP-binding protein YP_006294621.1 115019 R 754476 CDS YP_006294622.1 387126017 12846821 complement(115861..117528) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease 117528 12846821 Q7A_118 Methylophaga nitratireducenticrescens phosphate ABC transporter permease YP_006294622.1 115861 R 754476 CDS YP_006294623.1 387126018 12846822 complement(117541..119817) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; phosphate ABC transporter permease 119817 12846822 Q7A_119 Methylophaga nitratireducenticrescens phosphate ABC transporter permease YP_006294623.1 117541 R 754476 CDS YP_006294624.1 387126019 12846823 complement(119973..120929) 1 NC_017857.1 TIGRFAM: phosphate binding protein; phosphate ABC transporter 120929 12846823 Q7A_120 Methylophaga nitratireducenticrescens phosphate ABC transporter YP_006294624.1 119973 R 754476 CDS YP_006294625.1 387126020 12846824 complement(121071..122360) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR; phosphate regulon sensor protein PhoR 122360 12846824 Q7A_121 Methylophaga nitratireducenticrescens phosphate regulon sensor protein PhoR YP_006294625.1 121071 R 754476 CDS YP_006294626.1 387126021 12846825 complement(122373..123065) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein 123065 12846825 Q7A_122 Methylophaga nitratireducenticrescens phosphate regulon transcriptional regulatory protein YP_006294626.1 122373 R 754476 CDS YP_006294627.1 387126022 12846826 complement(123147..124370) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; permease 124370 12846826 Q7A_123 Methylophaga nitratireducenticrescens permease YP_006294627.1 123147 R 754476 CDS YP_006294628.1 387126023 12846827 complement(124429..126078) 1 NC_017857.1 PFAM: Phosphate transporter family; low-affinity inorganic phosphate transporter 126078 12846827 Q7A_124 Methylophaga nitratireducenticrescens low-affinity inorganic phosphate transporter YP_006294628.1 124429 R 754476 CDS YP_006294629.1 387126024 12846828 126215..128053 1 NC_017857.1 PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; protein-disulfide reductase 128053 12846828 Q7A_125 Methylophaga nitratireducenticrescens protein-disulfide reductase YP_006294629.1 126215 D 754476 CDS YP_006294630.1 387126025 12846829 128189..128626 1 NC_017857.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 128626 12846829 Q7A_126 Methylophaga nitratireducenticrescens 3-dehydroquinate dehydratase YP_006294630.1 128189 D 754476 CDS YP_006294631.1 387126026 12846830 128636..129103 1 NC_017857.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein 129103 12846830 Q7A_127 Methylophaga nitratireducenticrescens acetyl-CoA carboxylase biotin carboxyl carrier protein YP_006294631.1 128636 D 754476 CDS YP_006294632.1 387126027 12846831 129158..130498 1 NC_017857.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 130498 12846831 Q7A_128 Methylophaga nitratireducenticrescens biotin carboxylase YP_006294632.1 129158 D 754476 CDS YP_006294633.1 387126028 12846832 130510..131379 1 NC_017857.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 131379 12846832 Q7A_129 Methylophaga nitratireducenticrescens 50S ribosomal protein L11 methyltransferase YP_006294633.1 130510 D 754476 CDS YP_006294634.1 387126029 12846833 131372..132373 1 NC_017857.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA dihydrouridine synthase B 132373 12846833 Q7A_130 Methylophaga nitratireducenticrescens tRNA dihydrouridine synthase B YP_006294634.1 131372 D 754476 CDS YP_006294635.1 387126030 12846834 132370..132660 1 NC_017857.1 PFAM: Bacterial regulatory protein, Fis family; DNA-binding protein Fis 132660 12846834 Q7A_131 Methylophaga nitratireducenticrescens DNA-binding protein Fis YP_006294635.1 132370 D 754476 CDS YP_006294636.1 387126031 12846835 132690..134255 1 NC_017857.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase 134255 12846835 Q7A_132 Methylophaga nitratireducenticrescens IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase YP_006294636.1 132690 D 754476 CDS YP_006294637.1 387126032 12846836 134269..136902 1 NC_017857.1 PFAM: Adenylate cyclase, class-I; adenylate cyclase 136902 12846836 Q7A_133 Methylophaga nitratireducenticrescens adenylate cyclase YP_006294637.1 134269 D 754476 CDS YP_006294638.1 387126033 12846837 136956..137984 1 NC_017857.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 137984 12846837 Q7A_134 Methylophaga nitratireducenticrescens N-acetyl-gamma-glutamyl-phosphate reductase YP_006294638.1 136956 D 754476 CDS YP_006294639.1 387126034 12846838 complement(138047..138184) 1 NC_017857.1 hypothetical protein 138184 12846838 Q7A_135 Methylophaga nitratireducenticrescens hypothetical protein YP_006294639.1 138047 R 754476 CDS YP_006294640.1 387126035 12846839 138143..138688 1 NC_017857.1 hypothetical protein 138688 12846839 Q7A_136 Methylophaga nitratireducenticrescens hypothetical protein YP_006294640.1 138143 D 754476 CDS YP_006294641.1 387126036 12846840 138697..139134 1 NC_017857.1 PFAM: Protein of unknown function, DUF583; integral membrane protein CcmA 139134 12846840 Q7A_137 Methylophaga nitratireducenticrescens integral membrane protein CcmA YP_006294641.1 138697 D 754476 CDS YP_006294642.1 387126037 12846841 139285..139629 1 NC_017857.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron binding-like protein 139629 12846841 Q7A_138 Methylophaga nitratireducenticrescens iron binding-like protein YP_006294642.1 139285 D 754476 CDS YP_006294643.1 387126038 12846842 139758..141047 1 NC_017857.1 PFAM: Predicted membrane protein (DUF2254); hypothetical protein 141047 12846842 Q7A_139 Methylophaga nitratireducenticrescens hypothetical protein YP_006294643.1 139758 D 754476 CDS YP_006294644.1 387126039 12846843 141126..141752 1 NC_017857.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 141752 12846843 Q7A_140 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294644.1 141126 D 754476 CDS YP_006294645.1 387126040 12846844 141756..142928 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND efflux system, membrane fusion protein CmeA 142928 12846844 Q7A_141 Methylophaga nitratireducenticrescens RND efflux system, membrane fusion protein CmeA YP_006294645.1 141756 D 754476 CDS YP_006294646.1 387126041 12846845 142931..146077 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; RND efflux system, inner membrane transporter CmeB 146077 12846845 Q7A_142 Methylophaga nitratireducenticrescens RND efflux system, inner membrane transporter CmeB YP_006294646.1 142931 D 754476 CDS YP_006294647.1 387126042 12846846 146074..147516 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC 147516 12846846 Q7A_143 Methylophaga nitratireducenticrescens RND efflux system, outer membrane lipoprotein CmeC YP_006294647.1 146074 D 754476 CDS YP_006294648.1 387126043 12846847 147596..147775 1 NC_017857.1 hypothetical protein 147775 12846847 Q7A_144 Methylophaga nitratireducenticrescens hypothetical protein YP_006294648.1 147596 D 754476 CDS YP_006294649.1 387126044 12846848 147966..150026 1 NC_017857.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT 150026 12846848 Q7A_145 Methylophaga nitratireducenticrescens High-affinity choline uptake protein BetT YP_006294649.1 147966 D 754476 CDS YP_006294650.1 387126045 12846849 150302..150460 1 NC_017857.1 hypothetical protein 150460 12846849 Q7A_146 Methylophaga nitratireducenticrescens hypothetical protein YP_006294650.1 150302 D 754476 CDS YP_006294651.1 387126046 12846850 150511..151428 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 151428 12846850 Q7A_147 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294651.1 150511 D 754476 CDS YP_006294652.1 387126047 12846851 151515..152921 1 NC_017857.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 152921 12846851 Q7A_148 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006294652.1 151515 D 754476 CDS YP_006294653.1 387126048 12846852 complement(152875..153429) 1 NC_017857.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; Lactoylglutathione lyase 153429 12846852 Q7A_149 Methylophaga nitratireducenticrescens Lactoylglutathione lyase YP_006294653.1 152875 R 754476 CDS YP_006294654.1 387126049 12846853 complement(153456..154409) 1 NC_017857.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); magnesium and cobalt transport protein CorA 154409 12846853 Q7A_150 Methylophaga nitratireducenticrescens magnesium and cobalt transport protein CorA YP_006294654.1 153456 R 754476 CDS YP_006294655.1 387126050 12846854 complement(154790..155413) 1 NC_017857.1 PFAM: Methyltransferase domain; double-stranded RNA 3'-methylase 155413 12846854 Q7A_151 Methylophaga nitratireducenticrescens double-stranded RNA 3'-methylase YP_006294655.1 154790 R 754476 CDS YP_006294656.1 387126051 12846855 complement(155432..156790) 1 NC_017857.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; GTPase and tRNA-U34 5-formylation enzyme TrmE 156790 12846855 Q7A_152 Methylophaga nitratireducenticrescens GTPase and tRNA-U34 5-formylation enzyme TrmE YP_006294656.1 155432 R 754476 CDS YP_006294657.1 387126052 12846856 complement(156848..158491) 1 NC_017857.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; inner membrane protein translocase 158491 12846856 Q7A_153 Methylophaga nitratireducenticrescens inner membrane protein translocase YP_006294657.1 156848 R 754476 CDS YP_006294658.1 387126053 12846857 complement(158705..159037) 1 NC_017857.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component 159037 12846857 Q7A_154 Methylophaga nitratireducenticrescens ribonuclease P protein component YP_006294658.1 158705 R 754476 CDS YP_006294659.1 387126054 12846858 complement(159087..159221) 1 NC_017857.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 159221 12846858 Q7A_155 Methylophaga nitratireducenticrescens 50S ribosomal protein L34 YP_006294659.1 159087 R 754476 CDS YP_006294660.1 387126055 12846859 159487..160851 1 NC_017857.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 160851 12846859 Q7A_156 Methylophaga nitratireducenticrescens chromosomal replication initiator protein DnaA YP_006294660.1 159487 D 754476 CDS YP_006294661.1 387126056 12846860 160866..161969 1 NC_017857.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 161969 12846860 Q7A_157 Methylophaga nitratireducenticrescens DNA polymerase III subunit beta YP_006294661.1 160866 D 754476 CDS YP_006294662.1 387126057 12846861 complement(162035..163237) 1 NC_017857.1 PFAM: HemY protein N-terminus; TIGRFAM: hemY protein; HemY-like protein 163237 12846861 Q7A_158 Methylophaga nitratireducenticrescens HemY-like protein YP_006294662.1 162035 R 754476 CDS YP_006294663.1 387126058 12846862 complement(163234..164268) 1 NC_017857.1 PFAM: HemX; hypothetical protein 164268 12846862 Q7A_159 Methylophaga nitratireducenticrescens hypothetical protein YP_006294663.1 163234 R 754476 CDS YP_006294664.1 387126059 12846863 complement(164258..165022) 1 NC_017857.1 PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-III synthase 165022 12846863 Q7A_160 Methylophaga nitratireducenticrescens uroporphyrinogen-III synthase YP_006294664.1 164258 R 754476 CDS YP_006294665.1 387126060 12846864 complement(165015..165944) 1 NC_017857.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase 165944 12846864 Q7A_161 Methylophaga nitratireducenticrescens porphobilinogen deaminase YP_006294665.1 165015 R 754476 CDS YP_006294666.1 387126061 12846865 166064..167446 1 NC_017857.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 167446 12846865 Q7A_162 Methylophaga nitratireducenticrescens argininosuccinate lyase YP_006294666.1 166064 D 754476 CDS YP_006294667.1 387126062 12846866 167538..168902 1 NC_017857.1 PFAM: Protein of unknown function (DUF2914); hypothetical protein 168902 12846866 Q7A_163 Methylophaga nitratireducenticrescens hypothetical protein YP_006294667.1 167538 D 754476 CDS YP_006294668.1 387126063 12846867 complement(168899..169114) 1 NC_017857.1 hypothetical protein 169114 12846867 Q7A_164 Methylophaga nitratireducenticrescens hypothetical protein YP_006294668.1 168899 R 754476 CDS YP_006294669.1 387126064 12846868 complement(169141..169491) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3325); iron uptake protein 169491 12846868 Q7A_165 Methylophaga nitratireducenticrescens iron uptake protein YP_006294669.1 169141 R 754476 CDS YP_006294670.1 387126065 12846869 complement(169491..171134) 1 NC_017857.1 iron-regulated membrane protein 171134 12846869 Q7A_166 Methylophaga nitratireducenticrescens iron-regulated membrane protein YP_006294670.1 169491 R 754476 CDS YP_006294671.1 387126066 12846870 complement(171131..171412) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3649); hypothetical protein 171412 12846870 Q7A_167 Methylophaga nitratireducenticrescens hypothetical protein YP_006294671.1 171131 R 754476 CDS YP_006294672.1 387126067 12846871 complement(171948..174320) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 174320 12846871 Q7A_168 Methylophaga nitratireducenticrescens TonB-dependent siderophore receptor YP_006294672.1 171948 R 754476 CDS YP_006294673.1 387126068 12846872 complement(174440..175447) 1 NC_017857.1 PFAM: FecR protein; transmembrane sensor 175447 12846872 Q7A_169 Methylophaga nitratireducenticrescens transmembrane sensor YP_006294673.1 174440 R 754476 CDS YP_006294674.1 387126069 12846873 complement(175447..175962) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Sigma factor 175962 12846873 Q7A_170 Methylophaga nitratireducenticrescens Sigma factor YP_006294674.1 175447 R 754476 CDS YP_006294675.1 387126070 12846874 176275..178350 1 NC_017857.1 PFAM: Catalase; Catalase-related immune-responsive; catalase 178350 12846874 Q7A_171 Methylophaga nitratireducenticrescens catalase YP_006294675.1 176275 D 754476 CDS YP_006294676.1 387126071 12846875 178463..179635 1 NC_017857.1 PFAM: Domain of Unknown Function (DUF748); hypothetical protein 179635 12846875 Q7A_172 Methylophaga nitratireducenticrescens hypothetical protein YP_006294676.1 178463 D 754476 CDS YP_006294677.1 387126072 12846876 complement(179663..179959) 1 NC_017857.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor 179959 12846876 Q7A_173 Methylophaga nitratireducenticrescens Rho termination factor YP_006294677.1 179663 R 754476 CDS YP_006294678.1 387126073 12846877 complement(180263..182719) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; OMR family iron-siderophore receptor precursor 182719 12846877 Q7A_174 Methylophaga nitratireducenticrescens OMR family iron-siderophore receptor precursor YP_006294678.1 180263 R 754476 CDS YP_006294679.1 387126074 12846878 complement(182801..183775) 1 NC_017857.1 PFAM: FecR protein; FecR protein 183775 12846878 Q7A_175 Methylophaga nitratireducenticrescens FecR protein YP_006294679.1 182801 R 754476 CDS YP_006294680.1 387126075 12846879 complement(183772..184311) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 factor 184311 12846879 Q7A_176 Methylophaga nitratireducenticrescens sigma-70 factor YP_006294680.1 183772 R 754476 CDS YP_006294681.1 387126076 12846880 complement(184471..185166) 1 NC_017857.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; isoprenylcysteine carboxyl methyltransferase 185166 12846880 Q7A_177 Methylophaga nitratireducenticrescens isoprenylcysteine carboxyl methyltransferase YP_006294681.1 184471 R 754476 CDS YP_006294682.1 387126077 12846881 complement(185169..185333) 1 NC_017857.1 hypothetical protein 185333 12846881 Q7A_178 Methylophaga nitratireducenticrescens hypothetical protein YP_006294682.1 185169 R 754476 CDS YP_006294683.1 387126078 12846882 complement(185335..186396) 1 NC_017857.1 iron-regulated membrane protein 186396 12846882 Q7A_179 Methylophaga nitratireducenticrescens iron-regulated membrane protein YP_006294683.1 185335 R 754476 CDS YP_006294684.1 387126079 12846883 complement(186462..188450) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 188450 12846883 Q7A_180 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006294684.1 186462 R 754476 CDS YP_006294685.1 387126080 12846884 188634..189623 1 NC_017857.1 transcriptional regulator 189623 12846884 Q7A_181 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294685.1 188634 D 754476 CDS YP_006294686.1 387126081 12846885 189729..189899 1 NC_017857.1 hypothetical protein 189899 12846885 Q7A_182 Methylophaga nitratireducenticrescens hypothetical protein YP_006294686.1 189729 D 754476 CDS YP_006294687.1 387126082 12846886 190102..190440 1 NC_017857.1 FIG00594950; hypothetical protein 190440 12846886 Q7A_183 Methylophaga nitratireducenticrescens hypothetical protein YP_006294687.1 190102 D 754476 CDS YP_006294688.1 387126083 12846887 complement(190630..191460) 1 NC_017857.1 PFAM: Putative esterase; hydrolase 191460 12846887 Q7A_184 Methylophaga nitratireducenticrescens hydrolase YP_006294688.1 190630 R 754476 CDS YP_006294689.1 387126084 12846888 complement(191467..193875) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 193875 12846888 Q7A_185 Methylophaga nitratireducenticrescens ferrichrome-iron receptor YP_006294689.1 191467 R 754476 CDS YP_006294690.1 387126085 12846889 complement(194045..195022) 1 NC_017857.1 PFAM: FecR protein; transmembrane sensor 195022 12846889 Q7A_186 Methylophaga nitratireducenticrescens transmembrane sensor YP_006294690.1 194045 R 754476 CDS YP_006294691.1 387126086 12846890 complement(195019..195519) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 195519 12846890 Q7A_187 Methylophaga nitratireducenticrescens RNA polymerase YP_006294691.1 195019 R 754476 CDS YP_006294692.1 387126087 12846891 complement(195631..195777) 1 NC_017857.1 hypothetical protein 195777 12846891 Q7A_188 Methylophaga nitratireducenticrescens hypothetical protein YP_006294692.1 195631 R 754476 CDS YP_006294693.1 387126088 12846892 complement(196065..197153) 1 NC_017857.1 PepSY-associated TM helix domain; hypothetical protein 197153 12846892 Q7A_189 Methylophaga nitratireducenticrescens hypothetical protein YP_006294693.1 196065 R 754476 CDS YP_006294694.1 387126089 12846893 complement(197199..199616) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 199616 12846893 Q7A_190 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006294694.1 197199 R 754476 CDS YP_006294695.1 387126090 12846894 complement(199719..200687) 1 NC_017857.1 PFAM: FecR protein; Fe2+-dicitrate sensor 200687 12846894 Q7A_191 Methylophaga nitratireducenticrescens Fe2+-dicitrate sensor YP_006294695.1 199719 R 754476 CDS YP_006294696.1 387126091 12846895 complement(200697..201197) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 201197 12846895 Q7A_192 Methylophaga nitratireducenticrescens RNA polymerase YP_006294696.1 200697 R 754476 CDS YP_006294697.1 387126092 12846896 201489..203033 1 NC_017857.1 PFAM: Fic/DOC family; Filamentation induced by cAMP protein Fic 203033 12846896 Q7A_193 Methylophaga nitratireducenticrescens Filamentation induced by cAMP protein Fic YP_006294697.1 201489 D 754476 CDS YP_006294698.1 387126093 12846897 complement(202993..203145) 1 NC_017857.1 hypothetical protein 203145 12846897 Q7A_194 Methylophaga nitratireducenticrescens hypothetical protein YP_006294698.1 202993 R 754476 CDS YP_006294699.1 387126094 12846898 203108..203281 1 NC_017857.1 TIGRFAM: addiction module antidote protein, HigA family; addiction module antidote protein 203281 12846898 Q7A_195 Methylophaga nitratireducenticrescens addiction module antidote protein YP_006294699.1 203108 D 754476 CDS YP_006294700.1 387126095 12846899 complement(203517..205865) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 205865 12846899 Q7A_196 Methylophaga nitratireducenticrescens ferrichrome-iron receptor YP_006294700.1 203517 R 754476 CDS YP_006294701.1 387126096 12846900 complement(206082..207080) 1 NC_017857.1 PFAM: FecR protein; transmembrane sensor 207080 12846900 Q7A_197 Methylophaga nitratireducenticrescens transmembrane sensor YP_006294701.1 206082 R 754476 CDS YP_006294702.1 387126097 12846901 complement(207077..207376) 1 NC_017857.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Sigma factor 207376 12846901 Q7A_198 Methylophaga nitratireducenticrescens Sigma factor YP_006294702.1 207077 R 754476 CDS YP_006294703.1 387126098 12846902 complement(207413..207586) 1 NC_017857.1 PFAM: Sigma-70 region 2; RNA polymerase 207586 12846902 Q7A_199 Methylophaga nitratireducenticrescens RNA polymerase YP_006294703.1 207413 R 754476 CDS YP_006294704.1 387126099 12846903 complement(207793..210219) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 210219 12846903 Q7A_200 Methylophaga nitratireducenticrescens ferrichrome-iron receptor YP_006294704.1 207793 R 754476 CDS YP_006294705.1 387126100 12846904 complement(210295..211248) 1 NC_017857.1 PFAM: FecR protein; Fe2+-dicitrate sensor 211248 12846904 Q7A_201 Methylophaga nitratireducenticrescens Fe2+-dicitrate sensor YP_006294705.1 210295 R 754476 CDS YP_006294706.1 387126101 12846905 complement(211254..211751) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 211751 12846905 Q7A_202 Methylophaga nitratireducenticrescens RNA polymerase YP_006294706.1 211254 R 754476 CDS YP_006294707.1 387126102 12846906 complement(211904..214351) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 214351 12846906 Q7A_203 Methylophaga nitratireducenticrescens TonB-dependent siderophore receptor YP_006294707.1 211904 R 754476 CDS YP_006294708.1 387126103 12846907 complement(214686..215627) 1 NC_017857.1 PFAM: FecR protein; FecR protein 215627 12846907 Q7A_204 Methylophaga nitratireducenticrescens FecR protein YP_006294708.1 214686 R 754476 CDS YP_006294709.1 387126104 12846908 complement(215641..216009) 1 NC_017857.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 216009 12846908 Q7A_205 Methylophaga nitratireducenticrescens RNA polymerase YP_006294709.1 215641 R 754476 CDS YP_006294710.1 387126105 12846909 complement(216622..217077) 1 NC_017857.1 PFAM: Tellurite resistance protein TerB; hypothetical protein 217077 12846909 Q7A_206 Methylophaga nitratireducenticrescens hypothetical protein YP_006294710.1 216622 R 754476 CDS YP_006294711.1 387126106 12846910 complement(217130..218260) 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; Domain of unknown function (DUF3335); GNAT family acetyltransferase 218260 12846910 Q7A_207 Methylophaga nitratireducenticrescens GNAT family acetyltransferase YP_006294711.1 217130 R 754476 CDS YP_006294712.1 387126107 12846911 complement(218244..219314) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2817); hypothetical protein 219314 12846911 Q7A_208 Methylophaga nitratireducenticrescens hypothetical protein YP_006294712.1 218244 R 754476 CDS YP_006294713.1 387126108 12846912 219334..219450 1 NC_017857.1 hypothetical protein 219450 12846912 Q7A_209 Methylophaga nitratireducenticrescens hypothetical protein YP_006294713.1 219334 D 754476 CDS YP_006294714.1 387126109 12846913 219482..220966 1 NC_017857.1 PFAM: RimK-like ATP-grasp domain; ribosomal protein S6 glutaminyl transferase 220966 12846913 Q7A_210 Methylophaga nitratireducenticrescens ribosomal protein S6 glutaminyl transferase YP_006294714.1 219482 D 754476 CDS YP_006294715.1 387126110 12846914 complement(221044..223101) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor 223101 12846914 Q7A_211 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006294715.1 221044 R 754476 CDS YP_006294716.1 387126111 12846915 223254..224147 1 NC_017857.1 PFAM: DnaJ domain; DnaJ C terminal region; DnaJ-class molecular chaperone CbpA 224147 12846915 Q7A_212 Methylophaga nitratireducenticrescens DnaJ-class molecular chaperone CbpA YP_006294716.1 223254 D 754476 CDS YP_006294717.1 387126112 12846916 224169..225554 1 NC_017857.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; HtrA protease/chaperone protein / Serine protease (Protease DO) 225554 12846916 Q7A_213 Methylophaga nitratireducenticrescens HtrA protease/chaperone protein / Serine protease (Protease DO) YP_006294717.1 224169 D 754476 CDS YP_006294718.1 387126113 12846917 complement(225666..226142) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1348); hypothetical protein 226142 12846917 Q7A_214 Methylophaga nitratireducenticrescens hypothetical protein YP_006294718.1 225666 R 754476 CDS YP_006294719.1 387126114 12846918 226244..226819 1 NC_017857.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 226819 12846918 Q7A_215 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294719.1 226244 D 754476 CDS YP_006294720.1 387126115 12846919 complement(227064..227237) 1 NC_017857.1 hypothetical protein 227237 12846919 Q7A_216 Methylophaga nitratireducenticrescens hypothetical protein YP_006294720.1 227064 R 754476 CDS YP_006294721.1 387126116 12846920 227622..228101 1 NC_017857.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 228101 12846920 Q7A_217 Methylophaga nitratireducenticrescens Bacterioferritin YP_006294721.1 227622 D 754476 CDS YP_006294722.1 387126117 12846921 complement(228808..229722) 1 NC_017857.1 PFAM: PemK-like protein; hypothetical protein 229722 12846921 Q7A_218 Methylophaga nitratireducenticrescens hypothetical protein YP_006294722.1 228808 R 754476 CDS YP_006294723.1 387126118 12846922 complement(229756..231123) 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase 231123 12846922 Q7A_219 Methylophaga nitratireducenticrescens N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase YP_006294723.1 229756 R 754476 CDS YP_006294724.1 387126119 12846923 complement(231219..231641) 1 NC_017857.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase subunit epsilon 231641 12846923 Q7A_220 Methylophaga nitratireducenticrescens ATP synthase subunit epsilon YP_006294724.1 231219 R 754476 CDS YP_006294725.1 387126120 12846924 complement(231660..233036) 1 NC_017857.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase subunit beta 233036 12846924 Q7A_221 Methylophaga nitratireducenticrescens ATP synthase subunit beta YP_006294725.1 231660 R 754476 CDS YP_006294726.1 387126121 12846925 complement(233087..233884) 1 NC_017857.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase subunit gamma 233884 12846925 Q7A_222 Methylophaga nitratireducenticrescens ATP synthase subunit gamma YP_006294726.1 233087 R 754476 CDS YP_006294727.1 387126122 12846926 complement(233968..235509) 1 NC_017857.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase subunit alpha 235509 12846926 Q7A_223 Methylophaga nitratireducenticrescens ATP synthase subunit alpha YP_006294727.1 233968 R 754476 CDS YP_006294728.1 387126123 12846927 complement(235534..236064) 1 NC_017857.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase subunit delta 236064 12846927 Q7A_224 Methylophaga nitratireducenticrescens ATP synthase subunit delta YP_006294728.1 235534 R 754476 CDS YP_006294729.1 387126124 12846928 complement(236077..236547) 1 NC_017857.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase subunit B 236547 12846928 Q7A_225 Methylophaga nitratireducenticrescens ATP synthase subunit B YP_006294729.1 236077 R 754476 CDS YP_006294730.1 387126125 12846929 complement(236593..236826) 1 NC_017857.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase subunit C 236826 12846929 Q7A_226 Methylophaga nitratireducenticrescens ATP synthase subunit C YP_006294730.1 236593 R 754476 CDS YP_006294731.1 387126126 12846930 complement(236884..237783) 1 NC_017857.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase subunit A 237783 12846930 Q7A_227 Methylophaga nitratireducenticrescens ATP synthase subunit A YP_006294731.1 236884 R 754476 CDS YP_006294732.1 387126127 12846931 complement(237791..238033) 1 NC_017857.1 PFAM: ATP synthase I chain; ATP synthase I subunit 238033 12846931 Q7A_228 Methylophaga nitratireducenticrescens ATP synthase I subunit YP_006294732.1 237791 R 754476 CDS YP_006294733.1 387126128 12846932 complement(238453..239316) 1 NC_017857.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; hypothetical protein 239316 12846932 Q7A_229 Methylophaga nitratireducenticrescens hypothetical protein YP_006294733.1 238453 R 754476 CDS YP_006294734.1 387126129 12846933 complement(239333..240115) 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein 240115 12846933 Q7A_230 Methylophaga nitratireducenticrescens hypothetical protein YP_006294734.1 239333 R 754476 CDS YP_006294735.1 387126130 12846934 complement(240121..240747) 1 NC_017857.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; rRNA small subunit methyltransferase 240747 12846934 Q7A_231 Methylophaga nitratireducenticrescens rRNA small subunit methyltransferase YP_006294735.1 240121 R 754476 CDS YP_006294736.1 387126131 12846935 complement(240747..242630) 1 NC_017857.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 242630 12846935 Q7A_232 Methylophaga nitratireducenticrescens tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_006294736.1 240747 R 754476 CDS YP_006294737.1 387126132 12846936 242779..243138 1 NC_017857.1 PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 243138 12846936 Q7A_233 Methylophaga nitratireducenticrescens diacylglycerol kinase YP_006294737.1 242779 D 754476 CDS YP_006294738.1 387126133 12846937 complement(243135..243911) 1 NC_017857.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 243911 12846937 Q7A_234 Methylophaga nitratireducenticrescens prolipoprotein diacylglyceryl transferase YP_006294738.1 243135 R 754476 CDS YP_006294739.1 387126134 12846938 244192..244911 1 NC_017857.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial; hypothetical protein 244911 12846938 Q7A_235 Methylophaga nitratireducenticrescens hypothetical protein YP_006294739.1 244192 D 754476 CDS YP_006294740.1 387126135 12846939 244967..245305 1 NC_017857.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 245305 12846939 Q7A_236 Methylophaga nitratireducenticrescens nitrogen regulatory protein P-II YP_006294740.1 244967 D 754476 CDS YP_006294741.1 387126136 12846940 245324..246607 1 NC_017857.1 PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; Ammonium transporter 246607 12846940 Q7A_237 Methylophaga nitratireducenticrescens Ammonium transporter YP_006294741.1 245324 D 754476 CDS YP_006294742.1 387126137 12846941 complement(246679..247743) 1 NC_017857.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; Uroporphyrinogen III decarboxylase 247743 12846941 Q7A_238 Methylophaga nitratireducenticrescens Uroporphyrinogen III decarboxylase YP_006294742.1 246679 R 754476 CDS YP_006294743.1 387126138 12846942 complement(247877..249325) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase (NADPH) small subunit 249325 12846942 Q7A_239 Methylophaga nitratireducenticrescens glutamate synthase (NADPH) small subunit YP_006294743.1 247877 R 754476 CDS YP_006294744.1 387126139 12846943 complement(249306..253697) 1 NC_017857.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADPH) large subunit 253697 12846943 Q7A_240 Methylophaga nitratireducenticrescens glutamate synthase (NADPH) large subunit YP_006294744.1 249306 R 754476 CDS YP_006294745.1 387126140 12846944 complement(253832..253957) 1 NC_017857.1 hypothetical protein 253957 12846944 Q7A_241 Methylophaga nitratireducenticrescens hypothetical protein YP_006294745.1 253832 R 754476 CDS YP_006294746.1 387126141 12846945 254031..254525 1 NC_017857.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 254525 12846945 Q7A_242 Methylophaga nitratireducenticrescens phosphoribosylaminoimidazole carboxylase catalytic subunit YP_006294746.1 254031 D 754476 CDS YP_006294747.1 387126142 12846946 254540..255670 1 NC_017857.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; Phosphoribosylaminoimidazole carboxylase ATPase subunit 255670 12846946 Q7A_243 Methylophaga nitratireducenticrescens Phosphoribosylaminoimidazole carboxylase ATPase subunit YP_006294747.1 254540 D 754476 CDS YP_006294748.1 387126143 12846947 255712..255945 1 NC_017857.1 PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain; SelT/selW/selH selenoprotein 255945 12846947 Q7A_244 Methylophaga nitratireducenticrescens SelT/selW/selH selenoprotein YP_006294748.1 255712 D 754476 CDS YP_006294749.1 387126144 12846948 complement(255999..258281) 1 NC_017857.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I 258281 12846948 Q7A_245 Methylophaga nitratireducenticrescens DNA topoisomerase I YP_006294749.1 255999 R 754476 CDS YP_006294750.1 387126145 12846949 complement(258366..258833) 1 NC_017857.1 PFAM: Protein of unknown function (DUF494); hypothetical protein 258833 12846949 Q7A_246 Methylophaga nitratireducenticrescens hypothetical protein YP_006294750.1 258366 R 754476 CDS YP_006294751.1 387126146 12846950 complement(258857..259978) 1 NC_017857.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; Rossmann fold nucleotide-binding protein Smf 259978 12846950 Q7A_247 Methylophaga nitratireducenticrescens Rossmann fold nucleotide-binding protein Smf YP_006294751.1 258857 R 754476 CDS YP_006294752.1 387126147 12846951 complement(259989..261020) 1 NC_017857.1 PFAM: LysM domain; hypothetical protein 261020 12846951 Q7A_248 Methylophaga nitratireducenticrescens hypothetical protein YP_006294752.1 259989 R 754476 CDS YP_006294753.1 387126148 12846952 261207..261524 1 NC_017857.1 PFAM: Cytochrome c; cytochrome c553 261524 12846952 Q7A_249 Methylophaga nitratireducenticrescens cytochrome c553 YP_006294753.1 261207 D 754476 CDS YP_006294754.1 387126149 12846953 261563..262066 1 NC_017857.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 262066 12846953 Q7A_250 Methylophaga nitratireducenticrescens peptide deformylase YP_006294754.1 261563 D 754476 CDS YP_006294755.1 387126150 12846954 262075..263007 1 NC_017857.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 263007 12846954 Q7A_251 Methylophaga nitratireducenticrescens methionyl-tRNA formyltransferase YP_006294755.1 262075 D 754476 CDS YP_006294756.1 387126151 12846955 263000..264307 1 NC_017857.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; ribosomal RNA small subunit methyltransferase B 264307 12846955 Q7A_252 Methylophaga nitratireducenticrescens ribosomal RNA small subunit methyltransferase B YP_006294756.1 263000 D 754476 CDS YP_006294757.1 387126152 12846956 264273..264866 1 NC_017857.1 hypothetical protein 264866 12846956 Q7A_253 Methylophaga nitratireducenticrescens hypothetical protein YP_006294757.1 264273 D 754476 CDS YP_006294758.1 387126153 12846957 264851..267010 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; nitrogen regulation protein ntrY 267010 12846957 Q7A_254 Methylophaga nitratireducenticrescens nitrogen regulation protein ntrY YP_006294758.1 264851 D 754476 CDS YP_006294759.1 387126154 12846958 267013..268287 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; nitrogen assimilation regulatory protein NtrX 268287 12846958 Q7A_255 Methylophaga nitratireducenticrescens nitrogen assimilation regulatory protein NtrX YP_006294759.1 267013 D 754476 CDS YP_006294760.1 387126155 12846959 268297..269670 1 NC_017857.1 PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 269670 12846959 Q7A_256 Methylophaga nitratireducenticrescens Trk system potassium uptake protein TrkA YP_006294760.1 268297 D 754476 CDS YP_006294761.1 387126156 12846960 269710..270231 1 NC_017857.1 PFAM: Uncharacterized ACR, COG1678; hypothetical protein 270231 12846960 Q7A_257 Methylophaga nitratireducenticrescens hypothetical protein YP_006294761.1 269710 D 754476 CDS YP_006294762.1 387126157 12846961 270228..270647 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; Holliday junction resolvase 270647 12846961 Q7A_258 Methylophaga nitratireducenticrescens Holliday junction resolvase YP_006294762.1 270228 D 754476 CDS YP_006294763.1 387126158 12846962 270650..271174 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase 271174 12846962 Q7A_259 Methylophaga nitratireducenticrescens uracil phosphoribosyltransferase YP_006294763.1 270650 D 754476 CDS YP_006294764.1 387126159 12846963 271164..272135 1 NC_017857.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 272135 12846963 Q7A_260 Methylophaga nitratireducenticrescens aspartate carbamoyltransferase YP_006294764.1 271164 D 754476 CDS YP_006294765.1 387126160 12846964 272135..273418 1 NC_017857.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase 273418 12846964 Q7A_261 Methylophaga nitratireducenticrescens dihydroorotase YP_006294765.1 272135 D 754476 CDS YP_006294766.1 387126161 12846965 273438..273614 1 NC_017857.1 PFAM: Protein of unknown function (DUF3012); hypothetical protein 273614 12846965 Q7A_262 Methylophaga nitratireducenticrescens hypothetical protein YP_006294766.1 273438 D 754476 CDS YP_006294767.1 387126162 12846966 273611..274366 1 NC_017857.1 hypothetical protein 274366 12846966 Q7A_263 Methylophaga nitratireducenticrescens hypothetical protein YP_006294767.1 273611 D 754476 CDS YP_006294768.1 387126163 12846968 complement(275097..275933) 1 NC_017857.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor 275933 12846968 Q7A_265 Methylophaga nitratireducenticrescens Pseudoazurin precursor YP_006294768.1 275097 R 754476 CDS YP_006294769.1 387126164 12846969 complement(276079..278298) 1 NC_017857.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; monomeric isocitrate dehydrogenase (NADP) 278298 12846969 Q7A_266 Methylophaga nitratireducenticrescens monomeric isocitrate dehydrogenase (NADP) YP_006294769.1 276079 R 754476 CDS YP_006294770.1 387126165 12846970 complement(278786..279808) 1 NC_017857.1 PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein 279808 12846970 Q7A_267 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, ATP-binding protein YP_006294770.1 278786 R 754476 CDS YP_006294771.1 387126166 12846971 complement(279805..281271) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein 281271 12846971 Q7A_268 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, permease protein YP_006294771.1 279805 R 754476 CDS YP_006294772.1 387126167 12846972 complement(281325..282362) 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein 282362 12846972 Q7A_269 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, iron-binding protein YP_006294772.1 281325 R 754476 CDS YP_006294773.1 387126168 12846973 complement(282363..283175) 1 NC_017857.1 hypothetical protein 283175 12846973 Q7A_270 Methylophaga nitratireducenticrescens hypothetical protein YP_006294773.1 282363 R 754476 CDS YP_006294774.1 387126169 12846974 complement(283810..283923) 1 NC_017857.1 hypothetical protein 283923 12846974 Q7A_271 Methylophaga nitratireducenticrescens hypothetical protein YP_006294774.1 283810 R 754476 CDS YP_006294775.1 387126170 12846975 284469..286637 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 286637 12846975 Q7A_272 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006294775.1 284469 D 754476 CDS YP_006294776.1 387126171 12846976 287216..287338 1 NC_017857.1 hypothetical protein 287338 12846976 Q7A_273 Methylophaga nitratireducenticrescens hypothetical protein YP_006294776.1 287216 D 754476 CDS YP_006294777.1 387126172 12846977 complement(287460..287885) 1 NC_017857.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; pseudoazurin 287885 12846977 Q7A_274 Methylophaga nitratireducenticrescens pseudoazurin YP_006294777.1 287460 R 754476 CDS YP_006294778.1 387126173 12846978 complement(288192..289268) 1 NC_017857.1 PFAM: Domain of unknown function DUF20; permease PerM (YfgO) 289268 12846978 Q7A_275 Methylophaga nitratireducenticrescens permease PerM (YfgO) YP_006294778.1 288192 R 754476 CDS YP_006294779.1 387126174 12846979 289336..289485 1 NC_017857.1 hypothetical protein 289485 12846979 Q7A_276 Methylophaga nitratireducenticrescens hypothetical protein YP_006294779.1 289336 D 754476 CDS YP_006294780.1 387126175 12846980 complement(289490..289627) 1 NC_017857.1 hypothetical protein 289627 12846980 Q7A_277 Methylophaga nitratireducenticrescens hypothetical protein YP_006294780.1 289490 R 754476 CDS YP_006294781.1 387126176 12846981 289677..290510 1 NC_017857.1 TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter 290510 12846981 Q7A_278 Methylophaga nitratireducenticrescens efflux transporter YP_006294781.1 289677 D 754476 CDS YP_006294782.1 387126177 12846982 290517..293681 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 293681 12846982 Q7A_279 Methylophaga nitratireducenticrescens acriflavin resistance protein YP_006294782.1 290517 D 754476 CDS YP_006294783.1 387126178 12846983 complement(293657..294154) 1 NC_017857.1 PFAM: Lipocalin-like domain; lipoprotein Blc 294154 12846983 Q7A_280 Methylophaga nitratireducenticrescens lipoprotein Blc YP_006294783.1 293657 R 754476 CDS YP_006294784.1 387126179 12846984 294236..294493 1 NC_017857.1 PFAM: Protein of unknown function (DUF2805); TIGRFAM: TIGR03643 family protein; alcohol dehydrogenase, class IV 294493 12846984 Q7A_281 Methylophaga nitratireducenticrescens alcohol dehydrogenase, class IV YP_006294784.1 294236 D 754476 CDS YP_006294785.1 387126180 12846985 complement(294519..294914) 1 NC_017857.1 PFAM: MAPEG family; hypothetical protein 294914 12846985 Q7A_282 Methylophaga nitratireducenticrescens hypothetical protein YP_006294785.1 294519 R 754476 CDS YP_006294786.1 387126181 12846986 complement(294972..295982) 1 NC_017857.1 PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I 295982 12846986 Q7A_283 Methylophaga nitratireducenticrescens fructose-1,6-bisphosphatase, type I YP_006294786.1 294972 R 754476 CDS YP_006294787.1 387126182 12846987 complement(296142..296957) 1 NC_017857.1 PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; formylmethanofuran dehydrogenase 296957 12846987 Q7A_284 Methylophaga nitratireducenticrescens formylmethanofuran dehydrogenase YP_006294787.1 296142 R 754476 CDS YP_006294788.1 387126183 12846988 complement(296954..297856) 1 NC_017857.1 PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase; formylmethanofuran--tetrahydromethanopterin N-formyltransferase 297856 12846988 Q7A_285 Methylophaga nitratireducenticrescens formylmethanofuran--tetrahydromethanopterin N-formyltransferase YP_006294788.1 296954 R 754476 CDS YP_006294789.1 387126184 12846989 complement(297853..299520) 1 NC_017857.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A 299520 12846989 Q7A_286 Methylophaga nitratireducenticrescens formylmethanofuran dehydrogenase subunit A YP_006294789.1 297853 R 754476 CDS YP_006294790.1 387126185 12846990 complement(299533..300807) 1 NC_017857.1 TIGRFAM: formylmethanofuran dehydrogenase subunit B; formylmethanofuran dehydrogenase subunit B 300807 12846990 Q7A_287 Methylophaga nitratireducenticrescens formylmethanofuran dehydrogenase subunit B YP_006294790.1 299533 R 754476 CDS YP_006294791.1 387126186 12846991 300775..300921 1 NC_017857.1 hypothetical protein 300921 12846991 Q7A_288 Methylophaga nitratireducenticrescens hypothetical protein YP_006294791.1 300775 D 754476 CDS YP_006294792.1 387126187 12846992 complement(300901..301446) 1 NC_017857.1 PFAM: Sporulation related domain; TIGRFAM: cell division protein FtsN; hypothetical protein 301446 12846992 Q7A_289 Methylophaga nitratireducenticrescens hypothetical protein YP_006294792.1 300901 R 754476 CDS YP_006294793.1 387126188 12846993 complement(301509..303272) 1 NC_017857.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 303272 12846993 Q7A_290 Methylophaga nitratireducenticrescens arginyl-tRNA synthetase YP_006294793.1 301509 R 754476 CDS YP_006294794.1 387126189 12846994 complement(303350..305524) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; Helicase PriA essential for oriC/DnaA-independent DNA replication 305524 12846994 Q7A_291 Methylophaga nitratireducenticrescens Helicase PriA essential for oriC/DnaA-independent DNA replication YP_006294794.1 303350 R 754476 CDS YP_006294795.1 387126190 12846995 complement(305770..307383) 1 NC_017857.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Sodium-dependent phosphate transporter 307383 12846995 Q7A_292 Methylophaga nitratireducenticrescens Sodium-dependent phosphate transporter YP_006294795.1 305770 R 754476 CDS YP_006294796.1 387126191 12846996 307482..307967 1 NC_017857.1 PFAM: Dihydrofolate reductase; dihydrofolate reductase 307967 12846996 Q7A_293 Methylophaga nitratireducenticrescens dihydrofolate reductase YP_006294796.1 307482 D 754476 CDS YP_006294797.1 387126192 12846997 complement(307964..308200) 1 NC_017857.1 PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein; hypothetical protein 308200 12846997 Q7A_294 Methylophaga nitratireducenticrescens hypothetical protein YP_006294797.1 307964 R 754476 CDS YP_006294798.1 387126193 12846998 308603..308851 1 NC_017857.1 hypothetical protein 308851 12846998 Q7A_295 Methylophaga nitratireducenticrescens hypothetical protein YP_006294798.1 308603 D 754476 CDS YP_006294799.1 387126194 12846999 308863..309207 1 NC_017857.1 PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat domain-containing protein 309207 12846999 Q7A_296 Methylophaga nitratireducenticrescens pentapeptide repeat domain-containing protein YP_006294799.1 308863 D 754476 CDS YP_006294800.1 387126195 12847000 complement(309211..309954) 1 NC_017857.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; twin-arginine translocation protein 309954 12847000 Q7A_297 Methylophaga nitratireducenticrescens twin-arginine translocation protein YP_006294800.1 309211 R 754476 CDS YP_006294801.1 387126196 12847001 complement(309944..310264) 1 NC_017857.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB; twin-arginine translocation protein TatB 310264 12847001 Q7A_298 Methylophaga nitratireducenticrescens twin-arginine translocation protein TatB YP_006294801.1 309944 R 754476 CDS YP_006294802.1 387126197 12847002 complement(310270..310515) 1 NC_017857.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein TatA 310515 12847002 Q7A_299 Methylophaga nitratireducenticrescens twin-arginine translocation protein TatA YP_006294802.1 310270 R 754476 CDS YP_006294803.1 387126198 12847003 complement(310525..310863) 1 NC_017857.1 PFAM: Scavenger mRNA decapping enzyme C-term binding; hypothetical protein 310863 12847003 Q7A_300 Methylophaga nitratireducenticrescens hypothetical protein YP_006294803.1 310525 R 754476 CDS YP_006294804.1 387126199 12847004 complement(310860..311180) 1 NC_017857.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase 311180 12847004 Q7A_301 Methylophaga nitratireducenticrescens Phosphoribosyl-ATP pyrophosphatase YP_006294804.1 310860 R 754476 CDS YP_006294805.1 387126200 12847005 complement(311177..311560) 1 NC_017857.1 PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 311560 12847005 Q7A_302 Methylophaga nitratireducenticrescens phosphoribosyl-AMP cyclohydrolase YP_006294805.1 311177 R 754476 CDS YP_006294806.1 387126201 12847006 complement(311557..312330) 1 NC_017857.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 312330 12847006 Q7A_303 Methylophaga nitratireducenticrescens Imidazole glycerol phosphate synthase cyclase subunit YP_006294806.1 311557 R 754476 CDS YP_006294807.1 387126202 12847007 complement(312336..313085) 1 NC_017857.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 313085 12847007 Q7A_304 Methylophaga nitratireducenticrescens Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006294807.1 312336 R 754476 CDS YP_006294808.1 387126203 12847008 complement(313111..313746) 1 NC_017857.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Imidazole glycerol phosphate synthase amidotransferase subunit 313746 12847008 Q7A_305 Methylophaga nitratireducenticrescens Imidazole glycerol phosphate synthase amidotransferase subunit YP_006294808.1 313111 R 754476 CDS YP_006294809.1 387126204 12847009 complement(313794..314387) 1 NC_017857.1 PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 314387 12847009 Q7A_306 Methylophaga nitratireducenticrescens imidazoleglycerol-phosphate dehydratase YP_006294809.1 313794 R 754476 CDS YP_006294810.1 387126205 12847010 314485..315234 1 NC_017857.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; transcriptional regulator Anr 315234 12847010 Q7A_307 Methylophaga nitratireducenticrescens transcriptional regulator Anr YP_006294810.1 314485 D 754476 CDS YP_006294811.1 387126206 12847011 315616..315738 1 NC_017857.1 PFAM: OmpW family; outer membrane protein W 315738 12847011 Q7A_308 Methylophaga nitratireducenticrescens outer membrane protein W YP_006294811.1 315616 D 754476 CDS YP_006294812.1 387126207 12847012 315735..315953 1 NC_017857.1 PFAM: OmpW family; outer membrane protein W 315953 12847012 Q7A_309 Methylophaga nitratireducenticrescens outer membrane protein W YP_006294812.1 315735 D 754476 CDS YP_006294813.1 387126208 12847013 complement(316058..317602) 1 NC_017857.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; peptidoglycan lipid II flippase MurJ 317602 12847013 Q7A_310 Methylophaga nitratireducenticrescens peptidoglycan lipid II flippase MurJ YP_006294813.1 316058 R 754476 CDS YP_006294814.1 387126209 12847014 317655..318275 1 NC_017857.1 hypothetical protein 318275 12847014 Q7A_311 Methylophaga nitratireducenticrescens hypothetical protein YP_006294814.1 317655 D 754476 CDS YP_006294815.1 387126210 12847015 complement(318272..319183) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; hydrogen peroxide-inducible genes activator 319183 12847015 Q7A_312 Methylophaga nitratireducenticrescens hydrogen peroxide-inducible genes activator YP_006294815.1 318272 R 754476 CDS YP_006294816.1 387126211 12847016 319324..319488 1 NC_017857.1 PFAM: Rubredoxin; Rubredoxin 319488 12847016 Q7A_313 Methylophaga nitratireducenticrescens Rubredoxin YP_006294816.1 319324 D 754476 CDS YP_006294817.1 387126212 12847017 319583..320659 1 NC_017857.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA recombination and repair protein RecF 320659 12847017 Q7A_314 Methylophaga nitratireducenticrescens DNA recombination and repair protein RecF YP_006294817.1 319583 D 754476 CDS YP_006294818.1 387126213 12847018 320732..323146 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 323146 12847018 Q7A_315 Methylophaga nitratireducenticrescens DNA gyrase subunit B YP_006294818.1 320732 D 754476 CDS YP_006294819.1 387126214 12847019 complement(323542..324858) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase 324858 12847019 Q7A_316 Methylophaga nitratireducenticrescens NADH dehydrogenase YP_006294819.1 323542 R 754476 CDS YP_006294820.1 387126215 12847020 325068..325556 1 NC_017857.1 PFAM: Flavoprotein; flavoprotein 325556 12847020 Q7A_317 Methylophaga nitratireducenticrescens flavoprotein YP_006294820.1 325068 D 754476 CDS YP_006294821.1 387126216 12847021 325549..326976 1 NC_017857.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein; dihydropteroate synthase-like protein 326976 12847021 Q7A_318 Methylophaga nitratireducenticrescens dihydropteroate synthase-like protein YP_006294821.1 325549 D 754476 CDS YP_006294822.1 387126217 12847022 326990..327574 1 NC_017857.1 PFAM: Protein of unknown function (DUF447); hypothetical protein 327574 12847022 Q7A_319 Methylophaga nitratireducenticrescens hypothetical protein YP_006294822.1 326990 D 754476 CDS YP_006294823.1 387126218 12847023 327759..328271 1 NC_017857.1 PFAM: Protein of unknown function (DUF556); hypothetical protein 328271 12847023 Q7A_320 Methylophaga nitratireducenticrescens hypothetical protein YP_006294823.1 327759 D 754476 CDS YP_006294824.1 387126219 12847024 complement(328331..330610) 1 NC_017857.1 PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 330610 12847024 Q7A_321 Methylophaga nitratireducenticrescens 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_006294824.1 328331 R 754476 CDS YP_006294825.1 387126220 12847025 330711..331607 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional activator MetR 331607 12847025 Q7A_322 Methylophaga nitratireducenticrescens transcriptional activator MetR YP_006294825.1 330711 D 754476 CDS YP_006294826.1 387126221 12847026 complement(331604..332407) 1 NC_017857.1 PFAM: Response regulator receiver domain; chemotaxis regulator 332407 12847026 Q7A_323 Methylophaga nitratireducenticrescens chemotaxis regulator YP_006294826.1 331604 R 754476 CDS YP_006294827.1 387126222 12847027 complement(332420..332974) 1 NC_017857.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; hypothetical protein 332974 12847027 Q7A_324 Methylophaga nitratireducenticrescens hypothetical protein YP_006294827.1 332420 R 754476 CDS YP_006294828.1 387126223 12847028 complement(332984..334315) 1 NC_017857.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Carboxyl-terminal protease 334315 12847028 Q7A_325 Methylophaga nitratireducenticrescens Carboxyl-terminal protease YP_006294828.1 332984 R 754476 CDS YP_006294829.1 387126224 12847029 complement(334340..335449) 1 NC_017857.1 PFAM: Peptidase family M23; murein hydrolase 335449 12847029 Q7A_326 Methylophaga nitratireducenticrescens murein hydrolase YP_006294829.1 334340 R 754476 CDS YP_006294830.1 387126225 12847030 complement(335497..337029) 1 NC_017857.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 337029 12847030 Q7A_327 Methylophaga nitratireducenticrescens 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006294830.1 335497 R 754476 CDS YP_006294831.1 387126226 12847031 337188..337478 1 NC_017857.1 transcriptional regulator 337478 12847031 Q7A_328 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294831.1 337188 D 754476 CDS YP_006294832.1 387126227 12847032 337514..337933 1 NC_017857.1 PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase 337933 12847032 Q7A_329 Methylophaga nitratireducenticrescens Rhodanese-related sulfurtransferase YP_006294832.1 337514 D 754476 CDS YP_006294833.1 387126228 12847033 337950..338207 1 NC_017857.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; glutaredoxin 3 (Grx3) 338207 12847033 Q7A_330 Methylophaga nitratireducenticrescens glutaredoxin 3 (Grx3) YP_006294833.1 337950 D 754476 CDS YP_006294834.1 387126229 12847034 338230..338712 1 NC_017857.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; protein export cytoplasm chaperone protein 338712 12847034 Q7A_331 Methylophaga nitratireducenticrescens protein export cytoplasm chaperone protein YP_006294834.1 338230 D 754476 CDS YP_006294835.1 387126230 12847035 338722..339756 1 NC_017857.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase 339756 12847035 Q7A_332 Methylophaga nitratireducenticrescens glycerol-3-phosphate dehydrogenase YP_006294835.1 338722 D 754476 CDS YP_006294836.1 387126231 12847036 339781..340656 1 NC_017857.1 hypothetical protein 340656 12847036 Q7A_333 Methylophaga nitratireducenticrescens hypothetical protein YP_006294836.1 339781 D 754476 CDS YP_006294837.1 387126232 12847037 complement(340710..341873) 1 NC_017857.1 PFAM: Uncharacterized ACR, COG1565; hypothetical protein 341873 12847037 Q7A_334 Methylophaga nitratireducenticrescens hypothetical protein YP_006294837.1 340710 R 754476 CDS YP_006294838.1 387126233 12847038 341890..342609 1 NC_017857.1 PFAM: short chain dehydrogenase; folM Alternative dihydrofolate reductase 1 342609 12847038 Q7A_335 Methylophaga nitratireducenticrescens folM Alternative dihydrofolate reductase 1 YP_006294838.1 341890 D 754476 CDS YP_006294839.1 387126234 12847039 complement(343065..343418) 1 NC_017857.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase 343418 12847039 Q7A_336 Methylophaga nitratireducenticrescens dihydroneopterin aldolase YP_006294839.1 343065 R 754476 CDS YP_006294840.1 387126235 12847040 complement(343400..343528) 1 NC_017857.1 hypothetical protein 343528 12847040 Q7A_337 Methylophaga nitratireducenticrescens hypothetical protein YP_006294840.1 343400 R 754476 CDS YP_006294841.1 387126236 12847041 343495..344091 1 NC_017857.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate:glycerol-3-phosphate O-acyltransferase 344091 12847041 Q7A_338 Methylophaga nitratireducenticrescens acyl-phosphate:glycerol-3-phosphate O-acyltransferase YP_006294841.1 343495 D 754476 CDS YP_006294842.1 387126237 12847042 complement(344083..345099) 1 NC_017857.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; hypothetical protein 345099 12847042 Q7A_339 Methylophaga nitratireducenticrescens hypothetical protein YP_006294842.1 344083 R 754476 CDS YP_006294843.1 387126238 12847043 345252..345467 1 NC_017857.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 345467 12847043 Q7A_340 Methylophaga nitratireducenticrescens 30S ribosomal protein S21 YP_006294843.1 345252 D 754476 CDS YP_006294844.1 387126239 12847044 345491..345952 1 NC_017857.1 PFAM: Yqey-like protein; transamidase GatB domain-containing protein 345952 12847044 Q7A_341 Methylophaga nitratireducenticrescens transamidase GatB domain-containing protein YP_006294844.1 345491 D 754476 CDS YP_006294845.1 387126240 12847045 346021..347745 1 NC_017857.1 PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase 347745 12847045 Q7A_342 Methylophaga nitratireducenticrescens DNA primase YP_006294845.1 346021 D 754476 CDS YP_006294846.1 387126241 12847046 347841..349679 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma factor RpoD 349679 12847046 Q7A_343 Methylophaga nitratireducenticrescens RNA polymerase sigma factor RpoD YP_006294846.1 347841 D 754476 CDS YP_006294847.1 387126242 12847048 complement(349773..350918) 1 NC_017857.1 PFAM: Phage integrase family; site-specific recombinase XerD 350918 12847048 Q7A_345 Methylophaga nitratireducenticrescens site-specific recombinase XerD YP_006294847.1 349773 R 754476 CDS YP_006294848.1 387126243 12847049 351547..352245 1 NC_017857.1 hypothetical protein 352245 12847049 Q7A_346 Methylophaga nitratireducenticrescens hypothetical protein YP_006294848.1 351547 D 754476 CDS YP_006294849.1 387126244 12847050 352415..352780 1 NC_017857.1 PFAM: Bacterial mobilisation protein (MobC); mobilization protein MobC 352780 12847050 Q7A_347 Methylophaga nitratireducenticrescens mobilization protein MobC YP_006294849.1 352415 D 754476 CDS YP_006294850.1 387126245 12847051 352761..354566 1 NC_017857.1 PFAM: Relaxase/Mobilisation nuclease domain; relaxase/mobilization nuclease 354566 12847051 Q7A_348 Methylophaga nitratireducenticrescens relaxase/mobilization nuclease YP_006294850.1 352761 D 754476 CDS YP_006294851.1 387126246 12847052 complement(354581..354928) 1 NC_017857.1 hypothetical protein 354928 12847052 Q7A_349 Methylophaga nitratireducenticrescens hypothetical protein YP_006294851.1 354581 R 754476 CDS YP_006294852.1 387126247 12847053 complement(354988..356103) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent Lon protase 356103 12847053 Q7A_350 Methylophaga nitratireducenticrescens ATP-dependent Lon protase YP_006294852.1 354988 R 754476 CDS YP_006294853.1 387126248 12847054 complement(356137..356556) 1 NC_017857.1 PFAM: LAGLIDADG endonuclease; LAGLIDADG endonuclease 356556 12847054 Q7A_351 Methylophaga nitratireducenticrescens LAGLIDADG endonuclease YP_006294853.1 356137 R 754476 CDS YP_006294854.1 387126249 12847055 complement(356725..356955) 1 NC_017857.1 transcriptional regulator 356955 12847055 Q7A_352 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294854.1 356725 R 754476 CDS YP_006294855.1 387126250 12847056 complement(357177..357317) 1 NC_017857.1 hypothetical protein 357317 12847056 Q7A_353 Methylophaga nitratireducenticrescens hypothetical protein YP_006294855.1 357177 R 754476 CDS YP_006294856.1 387126251 12847057 357359..357475 1 NC_017857.1 hypothetical protein 357475 12847057 Q7A_354 Methylophaga nitratireducenticrescens hypothetical protein YP_006294856.1 357359 D 754476 CDS YP_006294857.1 387126252 12847058 complement(357437..358567) 1 NC_017857.1 multidrug ABC transporter permease 358567 12847058 Q7A_355 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006294857.1 357437 R 754476 CDS YP_006294858.1 387126253 12847059 complement(358569..361262) 1 NC_017857.1 PFAM: ABC transporter; multidrug ABC transporter permease 361262 12847059 Q7A_356 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006294858.1 358569 R 754476 CDS YP_006294859.1 387126254 12847060 complement(361335..362414) 1 NC_017857.1 PFAM: HlyD family secretion protein; secretion protein 362414 12847060 Q7A_357 Methylophaga nitratireducenticrescens secretion protein YP_006294859.1 361335 R 754476 CDS YP_006294860.1 387126255 12847061 complement(362429..363916) 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein CmeC 363916 12847061 Q7A_358 Methylophaga nitratireducenticrescens RND efflux system, outer membrane lipoprotein CmeC YP_006294860.1 362429 R 754476 CDS YP_006294861.1 387126256 12847062 364395..365033 1 NC_017857.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 365033 12847062 Q7A_359 Methylophaga nitratireducenticrescens transcriptional regulator YP_006294861.1 364395 D 754476 CDS YP_006294862.1 387126257 12847063 365056..365301 1 NC_017857.1 hypothetical protein 365301 12847063 Q7A_360 Methylophaga nitratireducenticrescens hypothetical protein YP_006294862.1 365056 D 754476 CDS YP_006294863.1 387126258 12847064 365282..366073 1 NC_017857.1 hypothetical protein 366073 12847064 Q7A_361 Methylophaga nitratireducenticrescens hypothetical protein YP_006294863.1 365282 D 754476 CDS YP_006294864.1 387126259 12847065 366070..368019 1 NC_017857.1 hypothetical protein 368019 12847065 Q7A_362 Methylophaga nitratireducenticrescens hypothetical protein YP_006294864.1 366070 D 754476 CDS YP_006294865.1 387126260 12847066 368024..368200 1 NC_017857.1 hypothetical protein 368200 12847066 Q7A_363 Methylophaga nitratireducenticrescens hypothetical protein YP_006294865.1 368024 D 754476 CDS YP_006294866.1 387126261 12847067 complement(368318..368470) 1 NC_017857.1 hypothetical protein 368470 12847067 Q7A_364 Methylophaga nitratireducenticrescens hypothetical protein YP_006294866.1 368318 R 754476 CDS YP_006294867.1 387126262 12847068 369126..369875 1 NC_017857.1 hypothetical protein 369875 12847068 Q7A_365 Methylophaga nitratireducenticrescens hypothetical protein YP_006294867.1 369126 D 754476 CDS YP_006294868.1 387126263 12847069 complement(370052..370900) 1 NC_017857.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 370900 12847069 Q7A_366 Methylophaga nitratireducenticrescens triosephosphate isomerase YP_006294868.1 370052 R 754476 CDS YP_006294869.1 387126264 12847070 complement(370945..371949) 1 NC_017857.1 PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I 371949 12847070 Q7A_367 Methylophaga nitratireducenticrescens fructose-1,6-bisphosphatase, type I YP_006294869.1 370945 R 754476 CDS YP_006294870.1 387126265 12847071 complement(372030..373085) 1 NC_017857.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; fructose-bisphosphate aldolase class II 373085 12847071 Q7A_368 Methylophaga nitratireducenticrescens fructose-bisphosphate aldolase class II YP_006294870.1 372030 R 754476 CDS YP_006294871.1 387126266 12847072 complement(373607..374128) 1 NC_017857.1 ankyrin domain-containing protein 374128 12847072 Q7A_369 Methylophaga nitratireducenticrescens ankyrin domain-containing protein YP_006294871.1 373607 R 754476 CDS YP_006294872.1 387126267 12847073 374304..374477 1 NC_017857.1 PFAM: Uncharacterized protein family UPF0057; hypothetical protein 374477 12847073 Q7A_370 Methylophaga nitratireducenticrescens hypothetical protein YP_006294872.1 374304 D 754476 CDS YP_006294873.1 387126268 12847074 complement(374571..374711) 1 NC_017857.1 PFAM: Entericidin EcnA/B family; small secreted protein 374711 12847074 Q7A_371 Methylophaga nitratireducenticrescens small secreted protein YP_006294873.1 374571 R 754476 CDS YP_006294874.1 387126269 12847075 374789..374926 1 NC_017857.1 hypothetical protein 374926 12847075 Q7A_372 Methylophaga nitratireducenticrescens hypothetical protein YP_006294874.1 374789 D 754476 CDS YP_006294875.1 387126270 12847076 375241..375627 1 NC_017857.1 PFAM: FecR protein; FecR protein 375627 12847076 Q7A_373 Methylophaga nitratireducenticrescens FecR protein YP_006294875.1 375241 D 754476 CDS YP_006294876.1 387126271 12847077 375624..376193 1 NC_017857.1 PFAM: OmpA family; outer membrane protein A precursor 376193 12847077 Q7A_374 Methylophaga nitratireducenticrescens outer membrane protein A precursor YP_006294876.1 375624 D 754476 CDS YP_006294877.1 387126272 12847078 376209..377555 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; Agglutination protein 377555 12847078 Q7A_375 Methylophaga nitratireducenticrescens Agglutination protein YP_006294877.1 376209 D 754476 CDS YP_006294878.1 387126273 12847080 380118..380612 1 NC_017857.1 PFAM: Redoxin; thiol peroxidase 380612 12847080 Q7A_380 Methylophaga nitratireducenticrescens thiol peroxidase YP_006294878.1 380118 D 754476 CDS YP_006294879.1 387126274 12847081 380781..381428 1 NC_017857.1 hypothetical protein 381428 12847081 Q7A_381 Methylophaga nitratireducenticrescens hypothetical protein YP_006294879.1 380781 D 754476 CDS YP_006294880.1 387126275 12847082 381552..382016 1 NC_017857.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; Isoquinoline 1-oxidoreductase subunit alpha 382016 12847082 Q7A_382 Methylophaga nitratireducenticrescens Isoquinoline 1-oxidoreductase subunit alpha YP_006294880.1 381552 D 754476 CDS YP_006294881.1 387126276 12847083 382013..384331 1 NC_017857.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Isoquinoline 1-oxidoreductase beta subunit 384331 12847083 Q7A_383 Methylophaga nitratireducenticrescens Isoquinoline 1-oxidoreductase beta subunit YP_006294881.1 382013 D 754476 CDS YP_006294882.1 387126277 12847084 384334..385329 1 NC_017857.1 PFAM: XdhC and CoxI family; Xanthine and CO dehydrogenases maturation factor 385329 12847084 Q7A_384 Methylophaga nitratireducenticrescens Xanthine and CO dehydrogenases maturation factor YP_006294882.1 384334 D 754476 CDS YP_006294883.1 387126278 12847085 385342..385956 1 NC_017857.1 CTP:molybdopterin cytidylyltransferase 385956 12847085 Q7A_385 Methylophaga nitratireducenticrescens CTP:molybdopterin cytidylyltransferase YP_006294883.1 385342 D 754476 CDS YP_006294884.1 387126279 12847087 complement(386964..387128) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1328); hypothetical protein 387128 12847087 Q7A_388 Methylophaga nitratireducenticrescens hypothetical protein YP_006294884.1 386964 R 754476 CDS YP_006294885.1 387126280 12847088 387322..387507 1 NC_017857.1 hypothetical protein 387507 12847088 Q7A_389 Methylophaga nitratireducenticrescens hypothetical protein YP_006294885.1 387322 D 754476 CDS YP_006294886.1 387126281 12847089 387589..387861 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF883); hypothetical protein 387861 12847089 Q7A_390 Methylophaga nitratireducenticrescens hypothetical protein YP_006294886.1 387589 D 754476 CDS YP_006294887.1 387126282 12847090 387901..388335 1 NC_017857.1 PFAM: Protein of unknown function (DUF1469); hypothetical protein 388335 12847090 Q7A_391 Methylophaga nitratireducenticrescens hypothetical protein YP_006294887.1 387901 D 754476 CDS YP_006294888.1 387126283 12847091 388412..388768 1 NC_017857.1 hypothetical protein 388768 12847091 Q7A_392 Methylophaga nitratireducenticrescens hypothetical protein YP_006294888.1 388412 D 754476 CDS YP_006294889.1 387126284 12847092 388811..389002 1 NC_017857.1 hypothetical protein 389002 12847092 Q7A_393 Methylophaga nitratireducenticrescens hypothetical protein YP_006294889.1 388811 D 754476 CDS YP_006294890.1 387126285 12847093 389127..390515 1 NC_017857.1 PFAM: Sodium:solute symporter family; twin-arginine translocation pathway signal 390515 12847093 Q7A_394 Methylophaga nitratireducenticrescens twin-arginine translocation pathway signal YP_006294890.1 389127 D 754476 CDS YP_006294891.1 387126286 12847094 390541..390801 1 NC_017857.1 hypothetical protein 390801 12847094 Q7A_395 Methylophaga nitratireducenticrescens hypothetical protein YP_006294891.1 390541 D 754476 CDS YP_006294892.1 387126287 12847095 390912..391154 1 NC_017857.1 hypothetical protein 391154 12847095 Q7A_396 Methylophaga nitratireducenticrescens hypothetical protein YP_006294892.1 390912 D 754476 CDS YP_006294893.1 387126288 12847096 391224..392519 1 NC_017857.1 PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein 392519 12847096 Q7A_397 Methylophaga nitratireducenticrescens Heavy metal RND efflux outer membrane protein YP_006294893.1 391224 D 754476 CDS YP_006294894.1 387126289 12847097 392524..393750 1 NC_017857.1 Co/Zn/Cd efflux system membrane fusion protein 393750 12847097 Q7A_398 Methylophaga nitratireducenticrescens Co/Zn/Cd efflux system membrane fusion protein YP_006294894.1 392524 D 754476 CDS YP_006294895.1 387126290 12847098 393760..396882 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Cobalt-zinc-cadmium resistance protein CzcA 396882 12847098 Q7A_399 Methylophaga nitratireducenticrescens Cobalt-zinc-cadmium resistance protein CzcA YP_006294895.1 393760 D 754476 CDS YP_006294896.1 387126291 12847099 complement(396960..397337) 1 NC_017857.1 hypothetical protein 397337 12847099 Q7A_400 Methylophaga nitratireducenticrescens hypothetical protein YP_006294896.1 396960 R 754476 CDS YP_006294897.1 387126292 12847100 397543..399003 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor signal transduction histidine kinase 399003 12847100 Q7A_401 Methylophaga nitratireducenticrescens sensor signal transduction histidine kinase YP_006294897.1 397543 D 754476 CDS YP_006294898.1 387126293 12847101 399000..400427 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component transcriptional regulator 400427 12847101 Q7A_402 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006294898.1 399000 D 754476 CDS YP_006294899.1 387126294 12847102 complement(400424..401557) 1 NC_017857.1 PFAM: KWG Leptospira; KWG repeat-containing protein 401557 12847102 Q7A_403 Methylophaga nitratireducenticrescens KWG repeat-containing protein YP_006294899.1 400424 R 754476 CDS YP_006294900.1 387126295 12847103 complement(401834..403189) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, plant; glutathione-disulfide reductase, animal/bacterial; glutathione reductase 403189 12847103 Q7A_404 Methylophaga nitratireducenticrescens glutathione reductase YP_006294900.1 401834 R 754476 CDS YP_006294901.1 387126296 12847104 complement(403277..403801) 1 NC_017857.1 PFAM: Redoxin; peroxiredoxin family protein/glutaredoxin 403801 12847104 Q7A_405 Methylophaga nitratireducenticrescens peroxiredoxin family protein/glutaredoxin YP_006294901.1 403277 R 754476 CDS YP_006294902.1 387126297 12847105 complement(403924..406041) 1 NC_017857.1 PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; hypothetical protein 406041 12847105 Q7A_406 Methylophaga nitratireducenticrescens hypothetical protein YP_006294902.1 403924 R 754476 CDS YP_006294903.1 387126298 12847106 complement(406134..409097) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase 409097 12847106 Q7A_407 Methylophaga nitratireducenticrescens sensor histidine kinase YP_006294903.1 406134 R 754476 CDS YP_006294904.1 387126299 12847107 complement(409248..409808) 1 NC_017857.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 409808 12847107 Q7A_408 Methylophaga nitratireducenticrescens 5-formyltetrahydrofolate cyclo-ligase YP_006294904.1 409248 R 754476 CDS YP_006294905.1 387126300 12847108 complement(409805..410245) 1 NC_017857.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; nitrite-sensitive transcriptional repressor NsrR 410245 12847108 Q7A_409 Methylophaga nitratireducenticrescens nitrite-sensitive transcriptional repressor NsrR YP_006294905.1 409805 R 754476 CDS YP_006294906.1 387126301 12847109 410332..411564 1 NC_017857.1 PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; flavohemoprotein 411564 12847109 Q7A_410 Methylophaga nitratireducenticrescens flavohemoprotein YP_006294906.1 410332 D 754476 CDS YP_006294907.1 387126302 12847110 411749..412066 1 NC_017857.1 PFAM: Peptidase propeptide and YPEB domain; hypothetical protein 412066 12847110 Q7A_411 Methylophaga nitratireducenticrescens hypothetical protein YP_006294907.1 411749 D 754476 CDS YP_006294908.1 387126303 12847111 complement(412376..413701) 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 413701 12847111 Q7A_412 Methylophaga nitratireducenticrescens Sensor protein PhoQ YP_006294908.1 412376 R 754476 CDS YP_006294909.1 387126304 12847112 complement(413698..414360) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system response regulator QseB 414360 12847112 Q7A_413 Methylophaga nitratireducenticrescens two-component system response regulator QseB YP_006294909.1 413698 R 754476 CDS YP_006294910.1 387126305 12847113 complement(414363..414683) 1 NC_017857.1 PFAM: Peptidase propeptide and YPEB domain; hypothetical protein 414683 12847113 Q7A_414 Methylophaga nitratireducenticrescens hypothetical protein YP_006294910.1 414363 R 754476 CDS YP_006294911.1 387126306 12847114 415120..416301 1 NC_017857.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 416301 12847114 Q7A_415 Methylophaga nitratireducenticrescens cyclopropane-fatty-acyl-phospholipid synthase YP_006294911.1 415120 D 754476 CDS YP_006294912.1 387126307 12847115 416441..417898 1 NC_017857.1 PFAM: Catalase; Catalase-related immune-responsive; catalase 417898 12847115 Q7A_416 Methylophaga nitratireducenticrescens catalase YP_006294912.1 416441 D 754476 CDS YP_006294913.1 387126308 12847116 417964..418434 1 NC_017857.1 PFAM: Ferritin-like domain; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase 418434 12847116 Q7A_417 Methylophaga nitratireducenticrescens Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / ferroxidase YP_006294913.1 417964 D 754476 CDS YP_006294914.1 387126309 12847117 complement(418846..420297) 1 NC_017857.1 PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 420297 12847117 Q7A_418 Methylophaga nitratireducenticrescens aldehyde dehydrogenase YP_006294914.1 418846 R 754476 CDS YP_006294915.1 387126310 12847118 complement(420307..421947) 1 NC_017857.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-requiring enzyme 421947 12847118 Q7A_419 Methylophaga nitratireducenticrescens thiamine pyrophosphate-requiring enzyme YP_006294915.1 420307 R 754476 CDS YP_006294916.1 387126311 12847119 complement(422034..422915) 1 NC_017857.1 PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB 422915 12847119 Q7A_420 Methylophaga nitratireducenticrescens flagellar motor rotation protein MotB YP_006294916.1 422034 R 754476 CDS YP_006294917.1 387126312 12847120 complement(422869..423006) 1 NC_017857.1 hypothetical protein 423006 12847120 Q7A_421 Methylophaga nitratireducenticrescens hypothetical protein YP_006294917.1 422869 R 754476 CDS YP_006294918.1 387126313 12847121 423090..426044 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 426044 12847121 Q7A_422 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006294918.1 423090 D 754476 CDS YP_006294919.1 387126314 12847122 426475..427785 1 NC_017857.1 PFAM: Sodium:neurotransmitter symporter family; sodium-dependent transporter 427785 12847122 Q7A_423 Methylophaga nitratireducenticrescens sodium-dependent transporter YP_006294919.1 426475 D 754476 CDS YP_006294920.1 387126315 12847123 427782..427922 1 NC_017857.1 hypothetical protein 427922 12847123 Q7A_424 Methylophaga nitratireducenticrescens hypothetical protein YP_006294920.1 427782 D 754476 CDS YP_006294921.1 387126316 12847124 427915..430032 1 NC_017857.1 PFAM: SNARE associated Golgi protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 430032 12847124 Q7A_425 Methylophaga nitratireducenticrescens phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase YP_006294921.1 427915 D 754476 CDS YP_006294922.1 387126317 12847125 430002..430736 1 NC_017857.1 PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/Exonuclease/phosphatase 430736 12847125 Q7A_426 Methylophaga nitratireducenticrescens endonuclease/Exonuclease/phosphatase YP_006294922.1 430002 D 754476 CDS YP_006294923.1 387126318 12847126 430800..430958 1 NC_017857.1 hypothetical protein 430958 12847126 Q7A_427 Methylophaga nitratireducenticrescens hypothetical protein YP_006294923.1 430800 D 754476 CDS YP_006294924.1 387126319 12847127 430974..433928 1 NC_017857.1 PFAM: Domain of Unknown Function (DUF748); hypothetical protein 433928 12847127 Q7A_428 Methylophaga nitratireducenticrescens hypothetical protein YP_006294924.1 430974 D 754476 CDS YP_006294925.1 387126320 12847128 434446..434565 1 NC_017857.1 hypothetical protein 434565 12847128 Q7A_429 Methylophaga nitratireducenticrescens hypothetical protein YP_006294925.1 434446 D 754476 CDS YP_006294926.1 387126321 12847129 434688..434873 1 NC_017857.1 IS982 family; transposase 434873 12847129 Q7A_430 Methylophaga nitratireducenticrescens transposase YP_006294926.1 434688 D 754476 CDS YP_006294927.1 387126322 12847130 complement(434842..435615) 1 NC_017857.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; nitric oxide reductase activation protein NorQ 435615 12847130 Q7A_431 Methylophaga nitratireducenticrescens nitric oxide reductase activation protein NorQ YP_006294927.1 434842 R 754476 CDS YP_006294928.1 387126323 12847131 complement(435634..437505) 1 NC_017857.1 PFAM: von Willebrand factor type A domain; nitric oxide reductase activation protein NorD 437505 12847131 Q7A_432 Methylophaga nitratireducenticrescens nitric oxide reductase activation protein NorD YP_006294928.1 435634 R 754476 CDS YP_006294929.1 387126324 12847132 complement(437526..438938) 1 NC_017857.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; nitric-oxide reductase subunit B 438938 12847132 Q7A_433 Methylophaga nitratireducenticrescens nitric-oxide reductase subunit B YP_006294929.1 437526 R 754476 CDS YP_006294930.1 387126325 12847133 complement(438955..439404) 1 NC_017857.1 PFAM: Cytochrome c; nitric-oxide reductase subunit C 439404 12847133 Q7A_434 Methylophaga nitratireducenticrescens nitric-oxide reductase subunit C YP_006294930.1 438955 R 754476 CDS YP_006294931.1 387126326 12847134 439689..441245 1 NC_017857.1 PFAM: GAF domain; Sigma-54 interaction domain; Anaerobic nitric oxide reductase transcription regulator NorR 441245 12847134 Q7A_435 Methylophaga nitratireducenticrescens Anaerobic nitric oxide reductase transcription regulator NorR YP_006294931.1 439689 D 754476 CDS YP_006294932.1 387126327 12847135 441274..441849 1 NC_017857.1 PFAM: Cytochrome c oxidase subunit III; nitric oxide reductase activation protein NorE 441849 12847135 Q7A_436 Methylophaga nitratireducenticrescens nitric oxide reductase activation protein NorE YP_006294932.1 441274 D 754476 CDS YP_006294933.1 387126328 12847136 441871..442098 1 NC_017857.1 hypothetical protein 442098 12847136 Q7A_437 Methylophaga nitratireducenticrescens hypothetical protein YP_006294933.1 441871 D 754476 CDS YP_006294934.1 387126329 12847137 complement(442217..443437) 1 NC_017857.1 PFAM: NnrS protein; NnrS-like protein 443437 12847137 Q7A_438 Methylophaga nitratireducenticrescens NnrS-like protein YP_006294934.1 442217 R 754476 CDS YP_006294935.1 387126330 12847138 complement(443931..444938) 1 NC_017857.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein MoaA 444938 12847138 Q7A_439 Methylophaga nitratireducenticrescens molybdenum cofactor biosynthesis protein MoaA YP_006294935.1 443931 R 754476 CDS YP_006294936.1 387126331 12847139 complement(445052..445333) 1 NC_017857.1 PFAM: DGC domain; hypothetical protein 445333 12847139 Q7A_440 Methylophaga nitratireducenticrescens hypothetical protein YP_006294936.1 445052 R 754476 CDS YP_006294937.1 387126332 12847140 446235..448157 1 NC_017857.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; nitrate/nitrite sensor protein 448157 12847140 Q7A_441 Methylophaga nitratireducenticrescens nitrate/nitrite sensor protein YP_006294937.1 446235 D 754476 CDS YP_006294938.1 387126333 12847141 448154..448816 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; nitrate/nitrite response regulator protein 448816 12847141 Q7A_442 Methylophaga nitratireducenticrescens nitrate/nitrite response regulator protein YP_006294938.1 448154 D 754476 CDS YP_006294939.1 387126334 12847142 complement(448966..449088) 1 NC_017857.1 hypothetical protein 449088 12847142 Q7A_443 Methylophaga nitratireducenticrescens hypothetical protein YP_006294939.1 448966 R 754476 CDS YP_006294940.1 387126335 12847143 449478..450743 1 NC_017857.1 PFAM: Major Facilitator Superfamily; nitrate/nitrite transporter 450743 12847143 Q7A_444 Methylophaga nitratireducenticrescens nitrate/nitrite transporter YP_006294940.1 449478 D 754476 CDS YP_006294941.1 387126336 12847144 450756..452366 1 NC_017857.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter 452366 12847144 Q7A_445 Methylophaga nitratireducenticrescens nitrate/nitrite transporter YP_006294941.1 450756 D 754476 CDS YP_006294942.1 387126337 12847145 452407..456162 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; respiratory nitrate reductase subunit alpha 456162 12847145 Q7A_446 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit alpha YP_006294942.1 452407 D 754476 CDS YP_006294943.1 387126338 12847146 456194..457738 1 NC_017857.1 TIGRFAM: nitrate reductase, beta subunit; respiratory nitrate reductase subunit beta 457738 12847146 Q7A_447 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit beta YP_006294943.1 456194 D 754476 CDS YP_006294944.1 387126339 12847147 457751..458281 1 NC_017857.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; respiratory nitrate reductase subunit delta 458281 12847147 Q7A_448 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit delta YP_006294944.1 457751 D 754476 CDS YP_006294945.1 387126340 12847148 458281..458976 1 NC_017857.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma 458976 12847148 Q7A_449 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit gamma YP_006294945.1 458281 D 754476 CDS YP_006294946.1 387126341 12847149 458993..459679 1 NC_017857.1 PFAM: Carbonic anhydrase; carbonic anhydrase 459679 12847149 Q7A_450 Methylophaga nitratireducenticrescens carbonic anhydrase YP_006294946.1 458993 D 754476 CDS YP_006294947.1 387126342 12847150 459781..461007 1 NC_017857.1 hypothetical protein 461007 12847150 Q7A_451 Methylophaga nitratireducenticrescens hypothetical protein YP_006294947.1 459781 D 754476 CDS YP_006294948.1 387126343 12847151 461907..462185 1 NC_017857.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D 462185 12847151 Q7A_452 Methylophaga nitratireducenticrescens coenzyme PQQ synthesis protein D YP_006294948.1 461907 D 754476 CDS YP_006294949.1 387126344 12847152 462154..463314 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E 463314 12847152 Q7A_453 Methylophaga nitratireducenticrescens coenzyme PQQ synthesis protein E YP_006294949.1 462154 D 754476 CDS YP_006294950.1 387126345 12847153 463499..463927 1 NC_017857.1 PFAM: Protein of unknown function (DUF989); hypothetical protein 463927 12847153 Q7A_454 Methylophaga nitratireducenticrescens hypothetical protein YP_006294950.1 463499 D 754476 CDS YP_006294951.1 387126346 12847154 463944..465044 1 NC_017857.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 465044 12847154 Q7A_455 Methylophaga nitratireducenticrescens phosphoserine aminotransferase YP_006294951.1 463944 D 754476 CDS YP_006294952.1 387126347 12847155 465177..465932 1 NC_017857.1 PFAM: Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 465932 12847155 Q7A_456 Methylophaga nitratireducenticrescens dihydroorotate dehydrogenase YP_006294952.1 465177 D 754476 CDS YP_006294953.1 387126348 12847156 465958..466806 1 NC_017857.1 PFAM: Transposase DDE domain; ISSod6 transposase, IS1301 466806 12847156 Q7A_457 Methylophaga nitratireducenticrescens ISSod6 transposase, IS1301 YP_006294953.1 465958 D 754476 CDS YP_006294954.1 387126349 12847157 467068..469230 1 NC_017857.1 PFAM: FMN-binding domain; nitrous oxide reductase maturation protein NosR 469230 12847157 Q7A_458 Methylophaga nitratireducenticrescens nitrous oxide reductase maturation protein NosR YP_006294954.1 467068 D 754476 CDS YP_006294955.1 387126350 12847159 471272..472561 1 NC_017857.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); nitrous oxide reductase maturation protein NosD 472561 12847159 Q7A_461 Methylophaga nitratireducenticrescens nitrous oxide reductase maturation protein NosD YP_006294955.1 471272 D 754476 CDS YP_006294956.1 387126351 12847160 472558..473457 1 NC_017857.1 PFAM: ABC transporter; nitrous oxide reductase maturation protein NosF (ATPase) 473457 12847160 Q7A_462 Methylophaga nitratireducenticrescens nitrous oxide reductase maturation protein NosF (ATPase) YP_006294956.1 472558 D 754476 CDS YP_006294957.1 387126352 12847161 473457..474287 1 NC_017857.1 nitrous oxide reductase maturation transmembrane protein NosY 474287 12847161 Q7A_463 Methylophaga nitratireducenticrescens nitrous oxide reductase maturation transmembrane protein NosY YP_006294957.1 473457 D 754476 CDS YP_006294958.1 387126353 12847162 474284..474796 1 NC_017857.1 PFAM: NosL; nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL 474796 12847162 Q7A_464 Methylophaga nitratireducenticrescens nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL YP_006294958.1 474284 D 754476 CDS YP_006294959.1 387126354 12847163 475610..477658 1 NC_017857.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleotide reductase of class III (anaerobic), large subunit 477658 12847163 Q7A_465 Methylophaga nitratireducenticrescens ribonucleotide reductase of class III (anaerobic), large subunit YP_006294959.1 475610 D 754476 CDS YP_006294960.1 387126355 12847164 477684..477854 1 NC_017857.1 hypothetical protein 477854 12847164 Q7A_466 Methylophaga nitratireducenticrescens hypothetical protein YP_006294960.1 477684 D 754476 CDS YP_006294961.1 387126356 12847165 477876..478556 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; ribonucleotide reductase of class III (anaerobic), activating protein 478556 12847165 Q7A_467 Methylophaga nitratireducenticrescens ribonucleotide reductase of class III (anaerobic), activating protein YP_006294961.1 477876 D 754476 CDS YP_006294962.1 387126357 12847166 478706..479593 1 NC_017857.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; pyridoxine biosynthesis glutamine amidotransferase, synthase subunit 479593 12847166 Q7A_468 Methylophaga nitratireducenticrescens pyridoxine biosynthesis glutamine amidotransferase, synthase subunit YP_006294962.1 478706 D 754476 CDS YP_006294963.1 387126358 12847167 479594..480160 1 NC_017857.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit 480160 12847167 Q7A_469 Methylophaga nitratireducenticrescens pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit YP_006294963.1 479594 D 754476 CDS YP_006294964.1 387126359 12847168 480179..480715 1 NC_017857.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin biosynthesis Mog protein, molybdochelatase 480715 12847168 Q7A_470 Methylophaga nitratireducenticrescens molybdopterin biosynthesis Mog protein, molybdochelatase YP_006294964.1 480179 D 754476 CDS YP_006294965.1 387126360 12847169 complement(480737..481252) 1 NC_017857.1 PFAM: SCP-2 sterol transfer family; lipid carrier protein 481252 12847169 Q7A_471 Methylophaga nitratireducenticrescens lipid carrier protein YP_006294965.1 480737 R 754476 CDS YP_006294966.1 387126361 12847170 481411..482406 1 NC_017857.1 PFAM: Peptidase family U32; FIG139552; protease 482406 12847170 Q7A_472 Methylophaga nitratireducenticrescens protease YP_006294966.1 481411 D 754476 CDS YP_006294967.1 387126362 12847171 482444..483349 1 NC_017857.1 PFAM: Peptidase family U32; protease 483349 12847171 Q7A_473 Methylophaga nitratireducenticrescens protease YP_006294967.1 482444 D 754476 CDS YP_006294968.1 387126363 12847172 complement(483467..483724) 1 NC_017857.1 Copper-containing nitrite reductase 483724 12847172 Q7A_474 Methylophaga nitratireducenticrescens Copper-containing nitrite reductase YP_006294968.1 483467 R 754476 CDS YP_006294969.1 387126364 12847173 484116..484256 1 NC_017857.1 hypothetical protein 484256 12847173 Q7A_475 Methylophaga nitratireducenticrescens hypothetical protein YP_006294969.1 484116 D 754476 CDS YP_006294970.1 387126365 12847174 complement(484327..484506) 1 NC_017857.1 hypothetical protein 484506 12847174 Q7A_476 Methylophaga nitratireducenticrescens hypothetical protein YP_006294970.1 484327 R 754476 CDS YP_006294971.1 387126366 12847175 484466..485197 1 NC_017857.1 hypothetical protein 485197 12847175 Q7A_477 Methylophaga nitratireducenticrescens hypothetical protein YP_006294971.1 484466 D 754476 CDS YP_006294972.1 387126367 12847176 complement(485203..485646) 1 NC_017857.1 copper export protein 485646 12847176 Q7A_478 Methylophaga nitratireducenticrescens copper export protein YP_006294972.1 485203 R 754476 CDS YP_006294973.1 387126368 12847177 complement(485678..488329) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter 488329 12847177 Q7A_479 Methylophaga nitratireducenticrescens nitrate/nitrite transporter YP_006294973.1 485678 R 754476 CDS YP_006294974.1 387126369 12847178 complement(488348..489106) 1 NC_017857.1 PFAM: PPIC-type PPIASE domain; Parvulin-like peptidyl-prolyl isomerase 489106 12847178 Q7A_480 Methylophaga nitratireducenticrescens Parvulin-like peptidyl-prolyl isomerase YP_006294974.1 488348 R 754476 CDS YP_006294975.1 387126370 12847179 complement(489124..489813) 1 NC_017857.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase subunit gamma 489813 12847179 Q7A_481 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit gamma YP_006294975.1 489124 R 754476 CDS YP_006294976.1 387126371 12847180 complement(489849..490547) 1 NC_017857.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; respiratory nitrate reductase subunit delta 490547 12847180 Q7A_482 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit delta YP_006294976.1 489849 R 754476 CDS YP_006294977.1 387126372 12847181 complement(490550..492088) 1 NC_017857.1 TIGRFAM: nitrate reductase, beta subunit; respiratory nitrate reductase subunit beta 492088 12847181 Q7A_483 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit beta YP_006294977.1 490550 R 754476 CDS YP_006294978.1 387126373 12847182 complement(492085..495828) 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; respiratory nitrate reductase subunit alpha 495828 12847182 Q7A_484 Methylophaga nitratireducenticrescens respiratory nitrate reductase subunit alpha YP_006294978.1 492085 R 754476 CDS YP_006294979.1 387126374 12847183 complement(496183..498231) 1 NC_017857.1 PFAM: von Willebrand factor type A domain; nitric oxide reductase activation protein NorD 498231 12847183 Q7A_485 Methylophaga nitratireducenticrescens nitric oxide reductase activation protein NorD YP_006294979.1 496183 R 754476 CDS YP_006294980.1 387126375 12847184 complement(498264..499082) 1 NC_017857.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; ATPase 499082 12847184 Q7A_486 Methylophaga nitratireducenticrescens ATPase YP_006294980.1 498264 R 754476 CDS YP_006294981.1 387126376 12847185 complement(499079..500440) 1 NC_017857.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; nitric-oxide reductase subunit B 500440 12847185 Q7A_487 Methylophaga nitratireducenticrescens nitric-oxide reductase subunit B YP_006294981.1 499079 R 754476 CDS YP_006294982.1 387126377 12847186 complement(500501..501331) 1 NC_017857.1 PFAM: Cytochrome c; nitric-oxide reductase subunit C 501331 12847186 Q7A_488 Methylophaga nitratireducenticrescens nitric-oxide reductase subunit C YP_006294982.1 500501 R 754476 CDS YP_006294983.1 387126378 12847187 complement(501346..501471) 1 NC_017857.1 hypothetical protein 501471 12847187 Q7A_489 Methylophaga nitratireducenticrescens hypothetical protein YP_006294983.1 501346 R 754476 CDS YP_006294984.1 387126379 12847188 complement(502346..502771) 1 NC_017857.1 hypothetical protein 502771 12847188 Q7A_490 Methylophaga nitratireducenticrescens hypothetical protein YP_006294984.1 502346 R 754476 CDS YP_006294985.1 387126380 12845518 complement(503995..504123) 1 NC_017857.1 hypothetical protein 504123 12845518 Q7A_492 Methylophaga nitratireducenticrescens hypothetical protein YP_006294985.1 503995 R 754476 CDS YP_006294986.1 387126381 12845519 complement(504322..505695) 1 NC_017857.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase 505695 12845519 Q7A_493 Methylophaga nitratireducenticrescens Coproporphyrinogen III oxidase YP_006294986.1 504322 R 754476 CDS YP_006294987.1 387126382 12845520 complement(505776..506447) 1 NC_017857.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; hypothetical protein 506447 12845520 Q7A_494 Methylophaga nitratireducenticrescens hypothetical protein YP_006294987.1 505776 R 754476 CDS YP_006294988.1 387126383 12845521 506625..507917 1 NC_017857.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; Phosphoribosylamine--glycine ligase 507917 12845521 Q7A_495 Methylophaga nitratireducenticrescens Phosphoribosylamine--glycine ligase YP_006294988.1 506625 D 754476 CDS YP_006294989.1 387126384 12845522 507946..508818 1 NC_017857.1 PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase 508818 12845522 Q7A_496 Methylophaga nitratireducenticrescens Phosphoribulokinase YP_006294989.1 507946 D 754476 CDS YP_006294990.1 387126385 12845523 508852..509406 1 NC_017857.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; hypothetical protein 509406 12845523 Q7A_497 Methylophaga nitratireducenticrescens hypothetical protein YP_006294990.1 508852 D 754476 CDS YP_006294991.1 387126386 12845524 509403..510329 1 NC_017857.1 PFAM: Coproporphyrinogen III oxidase; Coproporphyrinogen III oxidase 510329 12845524 Q7A_498 Methylophaga nitratireducenticrescens Coproporphyrinogen III oxidase YP_006294991.1 509403 D 754476 CDS YP_006294992.1 387126387 12845525 complement(510572..511660) 1 NC_017857.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 511660 12845525 Q7A_499 Methylophaga nitratireducenticrescens peptide chain release factor 1 YP_006294992.1 510572 R 754476 CDS YP_006294993.1 387126388 12845526 complement(511664..512923) 1 NC_017857.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 512923 12845526 Q7A_500 Methylophaga nitratireducenticrescens glutamyl-tRNA reductase YP_006294993.1 511664 R 754476 CDS YP_006294994.1 387126389 12845527 513046..514821 1 NC_017857.1 PFAM: Tetratricopeptide repeat; hypothetical protein 514821 12845527 Q7A_501 Methylophaga nitratireducenticrescens hypothetical protein YP_006294994.1 513046 D 754476 CDS YP_006294995.1 387126390 12845528 514818..515417 1 NC_017857.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB precursor 515417 12845528 Q7A_502 Methylophaga nitratireducenticrescens outer membrane lipoprotein LolB precursor YP_006294995.1 514818 D 754476 CDS YP_006294996.1 387126391 12845529 515414..516283 1 NC_017857.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 516283 12845529 Q7A_503 Methylophaga nitratireducenticrescens 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_006294996.1 515414 D 754476 CDS YP_006294997.1 387126392 12845531 516416..517402 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 517402 12845531 Q7A_505 Methylophaga nitratireducenticrescens ribose-phosphate pyrophosphokinase YP_006294997.1 516416 D 754476 CDS YP_006294998.1 387126393 12845532 517516..518190 1 NC_017857.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 518190 12845532 Q7A_506 Methylophaga nitratireducenticrescens 50S ribosomal protein L25 YP_006294998.1 517516 D 754476 CDS YP_006294999.1 387126394 12845533 518211..518783 1 NC_017857.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 518783 12845533 Q7A_507 Methylophaga nitratireducenticrescens peptidyl-tRNA hydrolase YP_006294999.1 518211 D 754476 CDS YP_006295000.1 387126395 12845534 518885..519976 1 NC_017857.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding and nucleic acid-binding protein YchF 519976 12845534 Q7A_508 Methylophaga nitratireducenticrescens GTP-binding and nucleic acid-binding protein YchF YP_006295000.1 518885 D 754476 CDS YP_006295001.1 387126396 12845535 520034..521101 1 NC_017857.1 PFAM: Phospholipase A1; phospholipase A1 precursor 521101 12845535 Q7A_509 Methylophaga nitratireducenticrescens phospholipase A1 precursor YP_006295001.1 520034 D 754476 CDS YP_006295002.1 387126397 12845537 complement(521407..522519) 1 NC_017857.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein 522519 12845537 Q7A_511 Methylophaga nitratireducenticrescens Potassium efflux system KefA protein YP_006295002.1 521407 R 754476 CDS YP_006295003.1 387126398 12845538 complement(522519..522632) 1 NC_017857.1 hypothetical protein 522632 12845538 Q7A_512 Methylophaga nitratireducenticrescens hypothetical protein YP_006295003.1 522519 R 754476 CDS YP_006295004.1 387126399 12845539 complement(522806..523099) 1 NC_017857.1 PFAM: Transposase DDE domain; IS4 family transposase 523099 12845539 Q7A_513 Methylophaga nitratireducenticrescens IS4 family transposase YP_006295004.1 522806 R 754476 CDS YP_006295005.1 387126400 12845540 complement(523096..523569) 1 NC_017857.1 transposase 523569 12845540 Q7A_514 Methylophaga nitratireducenticrescens transposase YP_006295005.1 523096 R 754476 CDS YP_006295006.1 387126401 12845541 523734..524120 1 NC_017857.1 hypothetical protein 524120 12845541 Q7A_515 Methylophaga nitratireducenticrescens hypothetical protein YP_006295006.1 523734 D 754476 CDS YP_006295007.1 387126402 12845542 524196..524621 1 NC_017857.1 hypothetical protein 524621 12845542 Q7A_516 Methylophaga nitratireducenticrescens hypothetical protein YP_006295007.1 524196 D 754476 CDS YP_006295008.1 387126403 12845543 complement(524618..525355) 1 NC_017857.1 hypothetical protein 525355 12845543 Q7A_517 Methylophaga nitratireducenticrescens hypothetical protein YP_006295008.1 524618 R 754476 CDS YP_006295009.1 387126404 12845544 complement(525434..526417) 1 NC_017857.1 hypothetical protein 526417 12845544 Q7A_518 Methylophaga nitratireducenticrescens hypothetical protein YP_006295009.1 525434 R 754476 CDS YP_006295010.1 387126405 12845545 526603..527004 1 NC_017857.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 527004 12845545 Q7A_519 Methylophaga nitratireducenticrescens Large-conductance mechanosensitive channel YP_006295010.1 526603 D 754476 CDS YP_006295011.1 387126406 12845546 527062..527673 1 NC_017857.1 hypothetical protein 527673 12845546 Q7A_520 Methylophaga nitratireducenticrescens hypothetical protein YP_006295011.1 527062 D 754476 CDS YP_006295012.1 387126407 12845547 complement(527651..528601) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; RuBisCO operon transcriptional regulator CbbR 528601 12845547 Q7A_521 Methylophaga nitratireducenticrescens RuBisCO operon transcriptional regulator CbbR YP_006295012.1 527651 R 754476 CDS YP_006295013.1 387126408 12845548 528847..530265 1 NC_017857.1 PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain; ribulose bisphosphate carboxylase large subunit 530265 12845548 Q7A_522 Methylophaga nitratireducenticrescens ribulose bisphosphate carboxylase large subunit YP_006295013.1 528847 D 754476 CDS YP_006295014.1 387126409 12845549 530335..530691 1 NC_017857.1 PFAM: Ribulose bisphosphate carboxylase, small chain; ribulose bisphosphate carboxylase small subunit 530691 12845549 Q7A_523 Methylophaga nitratireducenticrescens ribulose bisphosphate carboxylase small subunit YP_006295014.1 530335 D 754476 CDS YP_006295015.1 387126410 12845550 530784..531596 1 NC_017857.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; Rubisco activation protein CbbQ 531596 12845550 Q7A_524 Methylophaga nitratireducenticrescens Rubisco activation protein CbbQ YP_006295015.1 530784 D 754476 CDS YP_006295016.1 387126411 12845551 531636..533978 1 NC_017857.1 PFAM: von Willebrand factor type A domain; Rubisco activation protein CbbO 533978 12845551 Q7A_525 Methylophaga nitratireducenticrescens Rubisco activation protein CbbO YP_006295016.1 531636 D 754476 CDS YP_006295017.1 387126412 12845552 534224..534565 1 NC_017857.1 hypothetical protein 534565 12845552 Q7A_526 Methylophaga nitratireducenticrescens hypothetical protein YP_006295017.1 534224 D 754476 CDS YP_006295018.1 387126413 12845553 complement(534679..538935) 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; NMT1/THI5 like; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 538935 12845553 Q7A_527 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295018.1 534679 R 754476 CDS YP_006295019.1 387126414 12845554 complement(539025..540038) 1 NC_017857.1 MxaL protein 540038 12845554 Q7A_528 Methylophaga nitratireducenticrescens MxaL protein YP_006295019.1 539025 R 754476 CDS YP_006295020.1 387126415 12845555 complement(540050..540619) 1 NC_017857.1 MxaK protein 540619 12845555 Q7A_529 Methylophaga nitratireducenticrescens MxaK protein YP_006295020.1 540050 R 754476 CDS YP_006295021.1 387126416 12845556 complement(540619..541440) 1 NC_017857.1 PFAM: von Willebrand factor type A domain; MxaC protein 541440 12845556 Q7A_530 Methylophaga nitratireducenticrescens MxaC protein YP_006295021.1 540619 R 754476 CDS YP_006295022.1 387126417 12845557 complement(541593..542558) 1 NC_017857.1 MxaA protein 542558 12845557 Q7A_531 Methylophaga nitratireducenticrescens MxaA protein YP_006295022.1 541593 R 754476 CDS YP_006295023.1 387126418 12845558 complement(542548..543381) 1 NC_017857.1 hypothetical protein 543381 12845558 Q7A_532 Methylophaga nitratireducenticrescens hypothetical protein YP_006295023.1 542548 R 754476 CDS YP_006295024.1 387126419 12845559 complement(543378..544412) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase 544412 12845559 Q7A_533 Methylophaga nitratireducenticrescens moxR-like ATPase YP_006295024.1 543378 R 754476 CDS YP_006295025.1 387126420 12845560 complement(544496..544771) 1 NC_017857.1 PFAM: Methanol dehydrogenase beta subunit; methanol dehydrogenase small subunit 544771 12845560 Q7A_534 Methylophaga nitratireducenticrescens methanol dehydrogenase small subunit YP_006295025.1 544496 R 754476 CDS YP_006295026.1 387126421 12845561 complement(544903..545445) 1 NC_017857.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c(L), periplasmic; cytochrome c, class I 545445 12845561 Q7A_535 Methylophaga nitratireducenticrescens cytochrome c, class I YP_006295026.1 544903 R 754476 CDS YP_006295027.1 387126422 12845562 complement(545535..546332) 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: methanol oxidation system protein MoxJ; MxaJ protein 546332 12845562 Q7A_536 Methylophaga nitratireducenticrescens MxaJ protein YP_006295027.1 545535 R 754476 CDS YP_006295028.1 387126423 12845563 complement(546509..548395) 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 548395 12845563 Q7A_537 Methylophaga nitratireducenticrescens methanol dehydrogenase large subunit protein YP_006295028.1 546509 R 754476 CDS YP_006295029.1 387126424 12845564 complement(548600..549253) 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 549253 12845564 Q7A_538 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006295029.1 548600 R 754476 CDS YP_006295030.1 387126425 12845565 complement(549300..550271) 1 NC_017857.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; two-component sensor histidine kinase 550271 12845565 Q7A_539 Methylophaga nitratireducenticrescens two-component sensor histidine kinase YP_006295030.1 549300 R 754476 CDS YP_006295031.1 387126426 12845566 550494..550826 1 NC_017857.1 hypothetical protein 550826 12845566 Q7A_540 Methylophaga nitratireducenticrescens hypothetical protein YP_006295031.1 550494 D 754476 CDS YP_006295032.1 387126427 12845567 550865..551380 1 NC_017857.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD protein 551380 12845567 Q7A_541 Methylophaga nitratireducenticrescens MxaD protein YP_006295032.1 550865 D 754476 CDS YP_006295033.1 387126428 12845568 551387..552322 1 NC_017857.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein 552322 12845568 Q7A_542 Methylophaga nitratireducenticrescens hypothetical protein YP_006295033.1 551387 D 754476 CDS YP_006295034.1 387126429 12845569 complement(552355..552819) 1 NC_017857.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA (cytosine34-2'-O-)-methyltransferase 552819 12845569 Q7A_543 Methylophaga nitratireducenticrescens tRNA (cytosine34-2'-O-)-methyltransferase YP_006295034.1 552355 R 754476 CDS YP_006295035.1 387126430 12845570 complement(552822..554429) 1 NC_017857.1 PFAM: Transglycosylase SLT domain; LysM domain; membrane-bound lytic murein transglycosylase D 554429 12845570 Q7A_544 Methylophaga nitratireducenticrescens membrane-bound lytic murein transglycosylase D YP_006295035.1 552822 R 754476 CDS YP_006295036.1 387126431 12845571 554738..555541 1 NC_017857.1 PFAM: Protein of unknown function (DUF2797); hypothetical protein 555541 12845571 Q7A_545 Methylophaga nitratireducenticrescens hypothetical protein YP_006295036.1 554738 D 754476 CDS YP_006295037.1 387126432 12845572 555547..556566 1 NC_017857.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; dihydroorotate dehydrogenase 556566 12845572 Q7A_546 Methylophaga nitratireducenticrescens dihydroorotate dehydrogenase YP_006295037.1 555547 D 754476 CDS YP_006295038.1 387126433 12845573 556568..557407 1 NC_017857.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein 557407 12845573 Q7A_547 Methylophaga nitratireducenticrescens Potassium efflux system KefA protein YP_006295038.1 556568 D 754476 CDS YP_006295039.1 387126434 12845574 complement(557420..558190) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 558190 12845574 Q7A_548 Methylophaga nitratireducenticrescens hydroxyacylglutathione hydrolase YP_006295039.1 557420 R 754476 CDS YP_006295040.1 387126435 12845575 558214..558939 1 NC_017857.1 PFAM: Methyltransferase domain; SAM-dependent methyltransferase 558939 12845575 Q7A_549 Methylophaga nitratireducenticrescens SAM-dependent methyltransferase YP_006295040.1 558214 D 754476 CDS YP_006295041.1 387126436 12845576 558939..559382 1 NC_017857.1 PFAM: RNase H; ribonuclease HI 559382 12845576 Q7A_550 Methylophaga nitratireducenticrescens ribonuclease HI YP_006295041.1 558939 D 754476 CDS YP_006295042.1 387126437 12845577 559386..560117 1 NC_017857.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III subunit epsilon 560117 12845577 Q7A_551 Methylophaga nitratireducenticrescens DNA polymerase III subunit epsilon YP_006295042.1 559386 D 754476 CDS YP_006295043.1 387126438 12845578 560214..560771 1 NC_017857.1 PFAM: GrpE; Heat shock protein GrpE 560771 12845578 Q7A_552 Methylophaga nitratireducenticrescens Heat shock protein GrpE YP_006295043.1 560214 D 754476 CDS YP_006295044.1 387126439 12845579 560872..562794 1 NC_017857.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK 562794 12845579 Q7A_553 Methylophaga nitratireducenticrescens chaperone protein DnaK YP_006295044.1 560872 D 754476 CDS YP_006295045.1 387126440 12845580 562876..563988 1 NC_017857.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein DnaJ 563988 12845580 Q7A_554 Methylophaga nitratireducenticrescens chaperone protein DnaJ YP_006295045.1 562876 D 754476 CDS YP_006295046.1 387126441 12845581 564074..564883 1 NC_017857.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 564883 12845581 Q7A_555 Methylophaga nitratireducenticrescens dihydrodipicolinate reductase YP_006295046.1 564074 D 754476 CDS YP_006295047.1 387126442 12845582 complement(564884..565270) 1 NC_017857.1 hypothetical protein 565270 12845582 Q7A_556 Methylophaga nitratireducenticrescens hypothetical protein YP_006295047.1 564884 R 754476 CDS YP_006295048.1 387126443 12845583 565269..565496 1 NC_017857.1 hypothetical protein 565496 12845583 Q7A_557 Methylophaga nitratireducenticrescens hypothetical protein YP_006295048.1 565269 D 754476 CDS YP_006295049.1 387126444 12845584 complement(565464..567698) 1 NC_017857.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; multimodular transpeptidase-transglycosylase 567698 12845584 Q7A_558 Methylophaga nitratireducenticrescens multimodular transpeptidase-transglycosylase YP_006295049.1 565464 R 754476 CDS YP_006295050.1 387126445 12845585 568045..569361 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF898); thymidylate kinase 569361 12845585 Q7A_559 Methylophaga nitratireducenticrescens thymidylate kinase YP_006295050.1 568045 D 754476 CDS YP_006295051.1 387126446 12845586 569364..570521 1 NC_017857.1 PFAM: Peptidase family M48; Zn-dependent protease 570521 12845586 Q7A_560 Methylophaga nitratireducenticrescens Zn-dependent protease YP_006295051.1 569364 D 754476 CDS YP_006295052.1 387126447 12845587 570717..571271 1 NC_017857.1 PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 571271 12845587 Q7A_561 Methylophaga nitratireducenticrescens alkyl hydroperoxide reductase YP_006295052.1 570717 D 754476 CDS YP_006295053.1 387126448 12845588 571298..573286 1 NC_017857.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase 573286 12845588 Q7A_562 Methylophaga nitratireducenticrescens transketolase YP_006295053.1 571298 D 754476 CDS YP_006295054.1 387126449 12845589 573498..574496 1 NC_017857.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 574496 12845589 Q7A_563 Methylophaga nitratireducenticrescens NAD-dependent glyceraldehyde-3-phosphate dehydrogenase YP_006295054.1 573498 D 754476 CDS YP_006295055.1 387126450 12845590 574616..575800 1 NC_017857.1 PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 575800 12845590 Q7A_564 Methylophaga nitratireducenticrescens phosphoglycerate kinase YP_006295055.1 574616 D 754476 CDS YP_006295056.1 387126451 12845591 575819..577285 1 NC_017857.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 577285 12845591 Q7A_565 Methylophaga nitratireducenticrescens pyruvate kinase YP_006295056.1 575819 D 754476 CDS YP_006295057.1 387126452 12845592 577310..578380 1 NC_017857.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; fructose-bisphosphate aldolase class II 578380 12845592 Q7A_566 Methylophaga nitratireducenticrescens fructose-bisphosphate aldolase class II YP_006295057.1 577310 D 754476 CDS YP_006295058.1 387126453 12845593 578523..578897 1 NC_017857.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB; crcB-like protein 578897 12845593 Q7A_567 Methylophaga nitratireducenticrescens crcB-like protein YP_006295058.1 578523 D 754476 CDS YP_006295059.1 387126454 12845594 578894..579184 1 NC_017857.1 PFAM: Uncharacterized ACR, COG1993; hypothetical protein 579184 12845594 Q7A_568 Methylophaga nitratireducenticrescens hypothetical protein YP_006295059.1 578894 D 754476 CDS YP_006295060.1 387126455 12845595 579186..580460 1 NC_017857.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 580460 12845595 Q7A_569 Methylophaga nitratireducenticrescens seryl-tRNA synthetase YP_006295060.1 579186 D 754476 CDS YP_006295061.1 387126456 12845596 580453..581133 1 NC_017857.1 PFAM: Peptidase family M50; membrane metalloprotease 581133 12845596 Q7A_570 Methylophaga nitratireducenticrescens membrane metalloprotease YP_006295061.1 580453 D 754476 CDS YP_006295062.1 387126457 12845597 581169..582386 1 NC_017857.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 582386 12845597 Q7A_571 Methylophaga nitratireducenticrescens tryptophanyl-tRNA synthetase YP_006295062.1 581169 D 754476 CDS YP_006295063.1 387126458 12845598 582404..583324 1 NC_017857.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase B 583324 12845598 Q7A_572 Methylophaga nitratireducenticrescens ribosomal large subunit pseudouridine synthase B YP_006295063.1 582404 D 754476 CDS YP_006295064.1 387126459 12845599 complement(583321..584247) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase 584247 12845599 Q7A_573 Methylophaga nitratireducenticrescens response regulator receiver modulated diguanylate cyclase YP_006295064.1 583321 R 754476 CDS YP_006295065.1 387126460 12845600 complement(584337..585098) 1 NC_017857.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 585098 12845600 Q7A_574 Methylophaga nitratireducenticrescens short-chain dehydrogenase/reductase SDR YP_006295065.1 584337 R 754476 CDS YP_006295066.1 387126461 12845683 complement(585108..585473) 1 NC_017857.1 hypothetical protein 585473 12845683 Q7A_575 Methylophaga nitratireducenticrescens hypothetical protein YP_006295066.1 585108 R 754476 CDS YP_006295067.1 387126462 12845684 complement(585686..586969) 1 NC_017857.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase; phytoene desaturase 586969 12845684 Q7A_576 Methylophaga nitratireducenticrescens phytoene desaturase YP_006295067.1 585686 R 754476 CDS YP_006295068.1 387126463 12845685 complement(586971..587828) 1 NC_017857.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD; phytoene synthase 587828 12845685 Q7A_577 Methylophaga nitratireducenticrescens phytoene synthase YP_006295068.1 586971 R 754476 CDS YP_006295069.1 387126464 12845686 complement(587825..587938) 1 NC_017857.1 hypothetical protein 587938 12845686 Q7A_578 Methylophaga nitratireducenticrescens hypothetical protein YP_006295069.1 587825 R 754476 CDS YP_006295070.1 387126465 12845687 complement(588183..589151) 1 NC_017857.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 589151 12845687 Q7A_579 Methylophaga nitratireducenticrescens polyprenyl synthetase YP_006295070.1 588183 R 754476 CDS YP_006295071.1 387126466 12845688 589319..589630 1 NC_017857.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 589630 12845688 Q7A_580 Methylophaga nitratireducenticrescens 50S ribosomal protein L21 YP_006295071.1 589319 D 754476 CDS YP_006295072.1 387126467 12845689 589659..589916 1 NC_017857.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 589916 12845689 Q7A_581 Methylophaga nitratireducenticrescens 50S ribosomal protein L27 YP_006295072.1 589659 D 754476 CDS YP_006295073.1 387126468 12845690 589977..591062 1 NC_017857.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTP-binding protein Obg 591062 12845690 Q7A_582 Methylophaga nitratireducenticrescens GTP-binding protein Obg YP_006295073.1 589977 D 754476 CDS YP_006295074.1 387126469 12845691 591065..592195 1 NC_017857.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 592195 12845691 Q7A_583 Methylophaga nitratireducenticrescens glutamate 5-kinase YP_006295074.1 591065 D 754476 CDS YP_006295075.1 387126470 12845692 complement(592258..592518) 1 NC_017857.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 592518 12845692 Q7A_584 Methylophaga nitratireducenticrescens 30S ribosomal protein S20 YP_006295075.1 592258 R 754476 CDS YP_006295076.1 387126471 12845693 592623..593405 1 NC_017857.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); Exodeoxyribonuclease III 593405 12845693 Q7A_585 Methylophaga nitratireducenticrescens Exodeoxyribonuclease III YP_006295076.1 592623 D 754476 CDS YP_006295077.1 387126472 12845694 593461..593628 1 NC_017857.1 hypothetical protein 593628 12845694 Q7A_586 Methylophaga nitratireducenticrescens hypothetical protein YP_006295077.1 593461 D 754476 CDS YP_006295078.1 387126473 12845695 complement(594468..596594) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ 596594 12845695 Q7A_587 Methylophaga nitratireducenticrescens ATP-dependent DNA helicase RecQ YP_006295078.1 594468 R 754476 CDS YP_006295079.1 387126474 12845696 596823..597179 1 NC_017857.1 hypothetical protein 597179 12845696 Q7A_588 Methylophaga nitratireducenticrescens hypothetical protein YP_006295079.1 596823 D 754476 CDS YP_006295080.1 387126475 12845697 597916..598263 1 NC_017857.1 PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily 598263 12845697 Q7A_589 Methylophaga nitratireducenticrescens enzyme of the cupin superfamily YP_006295080.1 597916 D 754476 CDS YP_006295081.1 387126476 12845698 complement(598366..598626) 1 NC_017857.1 PFAM: Helix-turn-helix; XRE family transcriptional regulator 598626 12845698 Q7A_590 Methylophaga nitratireducenticrescens XRE family transcriptional regulator YP_006295081.1 598366 R 754476 CDS YP_006295082.1 387126477 12845699 complement(598628..598909) 1 NC_017857.1 TIGRFAM: addiction module toxin, RelE/StbE family; addiction module toxin 598909 12845699 Q7A_591 Methylophaga nitratireducenticrescens addiction module toxin YP_006295082.1 598628 R 754476 CDS YP_006295083.1 387126478 12845700 599418..599543 1 NC_017857.1 hypothetical protein 599543 12845700 Q7A_592 Methylophaga nitratireducenticrescens hypothetical protein YP_006295083.1 599418 D 754476 CDS YP_006295084.1 387126479 12845701 complement(600413..600538) 1 NC_017857.1 hypothetical protein 600538 12845701 Q7A_593 Methylophaga nitratireducenticrescens hypothetical protein YP_006295084.1 600413 R 754476 CDS YP_006295085.1 387126480 12845702 complement(600947..602035) 1 NC_017857.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; DNA polymerase IV 602035 12845702 Q7A_594 Methylophaga nitratireducenticrescens DNA polymerase IV YP_006295085.1 600947 R 754476 CDS YP_006295086.1 387126481 12845703 602048..602164 1 NC_017857.1 hypothetical protein 602164 12845703 Q7A_595 Methylophaga nitratireducenticrescens hypothetical protein YP_006295086.1 602048 D 754476 CDS YP_006295087.1 387126482 12845704 602270..603895 1 NC_017857.1 PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease; AmpG permease 603895 12845704 Q7A_596 Methylophaga nitratireducenticrescens AmpG permease YP_006295087.1 602270 D 754476 CDS YP_006295088.1 387126483 12845705 603907..604497 1 NC_017857.1 hypothetical protein 604497 12845705 Q7A_597 Methylophaga nitratireducenticrescens hypothetical protein YP_006295088.1 603907 D 754476 CDS YP_006295089.1 387126484 12845706 604584..604967 1 NC_017857.1 hypothetical protein 604967 12845706 Q7A_598 Methylophaga nitratireducenticrescens hypothetical protein YP_006295089.1 604584 D 754476 CDS YP_006295090.1 387126485 12845707 complement(604989..606350) 1 NC_017857.1 PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase; decarboxylase-like protein 606350 12845707 Q7A_599 Methylophaga nitratireducenticrescens decarboxylase-like protein YP_006295090.1 604989 R 754476 CDS YP_006295091.1 387126486 12845708 complement(606500..606997) 1 NC_017857.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein 606997 12845708 Q7A_600 Methylophaga nitratireducenticrescens ssDNA-binding protein YP_006295091.1 606500 R 754476 CDS YP_006295092.1 387126487 12845709 complement(607037..608422) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; transport protein 608422 12845709 Q7A_601 Methylophaga nitratireducenticrescens transport protein YP_006295092.1 607037 R 754476 CDS YP_006295093.1 387126488 12845710 608473..611292 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 611292 12845710 Q7A_602 Methylophaga nitratireducenticrescens excinuclease ABC subunit A YP_006295093.1 608473 D 754476 CDS YP_006295094.1 387126489 12845711 611289..611912 1 NC_017857.1 PFAM: CYTH domain; adenylate cyclase 611912 12845711 Q7A_603 Methylophaga nitratireducenticrescens adenylate cyclase YP_006295094.1 611289 D 754476 CDS YP_006295095.1 387126490 12845712 complement(611917..612963) 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 612963 12845712 Q7A_604 Methylophaga nitratireducenticrescens Ferric siderophore transport system, periplasmic binding protein TonB YP_006295095.1 611917 R 754476 CDS YP_006295096.1 387126491 12845713 complement(612968..614014) 1 NC_017857.1 PFAM: ApbE family; membrane-associated lipoprotein 614014 12845713 Q7A_605 Methylophaga nitratireducenticrescens membrane-associated lipoprotein YP_006295096.1 612968 R 754476 CDS YP_006295097.1 387126492 12845714 complement(614011..614955) 1 NC_017857.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase 614955 12845714 Q7A_606 Methylophaga nitratireducenticrescens glutathione synthetase YP_006295097.1 614011 R 754476 CDS YP_006295098.1 387126493 12845715 615135..616064 1 NC_017857.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 616064 12845715 Q7A_607 Methylophaga nitratireducenticrescens glycyl-tRNA synthetase subunit alpha YP_006295098.1 615135 D 754476 CDS YP_006295099.1 387126494 12845716 616067..618145 1 NC_017857.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta 618145 12845716 Q7A_608 Methylophaga nitratireducenticrescens glycyl-tRNA synthetase subunit beta YP_006295099.1 616067 D 754476 CDS YP_006295100.1 387126495 12845717 618155..618694 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; Histidinol-phosphatase 618694 12845717 Q7A_609 Methylophaga nitratireducenticrescens Histidinol-phosphatase YP_006295100.1 618155 D 754476 CDS YP_006295101.1 387126496 12845718 618694..619446 1 NC_017857.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 619446 12845718 Q7A_610 Methylophaga nitratireducenticrescens 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006295101.1 618694 D 754476 CDS YP_006295102.1 387126497 12845719 619433..621514 1 NC_017857.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 621514 12845719 Q7A_611 Methylophaga nitratireducenticrescens response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_006295102.1 619433 D 754476 CDS YP_006295103.1 387126498 12845720 complement(621567..622448) 1 NC_017857.1 PFAM: Peptidase family M48; htpX-like protease 622448 12845720 Q7A_612 Methylophaga nitratireducenticrescens htpX-like protease YP_006295103.1 621567 R 754476 CDS YP_006295104.1 387126499 12845721 complement(622580..623599) 1 NC_017857.1 PFAM: ATP-grasp domain; ATP-grasp domain-containing protein 623599 12845721 Q7A_613 Methylophaga nitratireducenticrescens ATP-grasp domain-containing protein YP_006295104.1 622580 R 754476 CDS YP_006295105.1 387126500 12845722 complement(623624..624529) 1 NC_017857.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylene tetrahydromethanopterin dehydrogenase 624529 12845722 Q7A_614 Methylophaga nitratireducenticrescens methylene tetrahydromethanopterin dehydrogenase YP_006295105.1 623624 R 754476 CDS YP_006295106.1 387126501 12845723 complement(624563..625573) 1 NC_017857.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase 625573 12845723 Q7A_615 Methylophaga nitratireducenticrescens beta-ribofuranosylaminobenzene 5'-phosphate synthase YP_006295106.1 624563 R 754476 CDS YP_006295107.1 387126502 12845724 complement(625591..626454) 1 NC_017857.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; Shikimate / quinate 5-dehydrogenase; methylene tetrahydromethanopterin dehydrogenase 626454 12845724 Q7A_616 Methylophaga nitratireducenticrescens methylene tetrahydromethanopterin dehydrogenase YP_006295107.1 625591 R 754476 CDS YP_006295108.1 387126503 12845725 626673..627035 1 NC_017857.1 hypothetical protein 627035 12845725 Q7A_617 Methylophaga nitratireducenticrescens hypothetical protein YP_006295108.1 626673 D 754476 CDS YP_006295109.1 387126504 12845726 complement(627165..627284) 1 NC_017857.1 hypothetical protein 627284 12845726 Q7A_618 Methylophaga nitratireducenticrescens hypothetical protein YP_006295109.1 627165 R 754476 CDS YP_006295110.1 387126505 12845727 complement(627810..628562) 1 NC_017857.1 PFAM: Sulphur oxidation protein SoxZ; hypothetical protein 628562 12845727 Q7A_619 Methylophaga nitratireducenticrescens hypothetical protein YP_006295110.1 627810 R 754476 CDS YP_006295111.1 387126506 12845728 complement(628624..629556) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 629556 12845728 Q7A_620 Methylophaga nitratireducenticrescens Zn-dependent hydrolase YP_006295111.1 628624 R 754476 CDS YP_006295112.1 387126507 12845729 629646..631049 1 NC_017857.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 631049 12845729 Q7A_621 Methylophaga nitratireducenticrescens glutamyl-tRNA synthetase YP_006295112.1 629646 D 754476 CDS YP_006295113.1 387126508 12845730 631256..633034 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 633034 12845730 Q7A_622 Methylophaga nitratireducenticrescens methanol dehydrogenase large subunit protein YP_006295113.1 631256 D 754476 CDS YP_006295114.1 387126509 12845731 633301..634047 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein; MxaJ protein 634047 12845731 Q7A_623 Methylophaga nitratireducenticrescens MxaJ protein YP_006295114.1 633301 D 754476 CDS YP_006295115.1 387126510 12845732 complement(634085..634270) 1 NC_017857.1 hypothetical protein 634270 12845732 Q7A_624 Methylophaga nitratireducenticrescens hypothetical protein YP_006295115.1 634085 R 754476 CDS YP_006295116.1 387126511 12845733 634664..635305 1 NC_017857.1 hypothetical protein 635305 12845733 Q7A_625 Methylophaga nitratireducenticrescens hypothetical protein YP_006295116.1 634664 D 754476 CDS YP_006295117.1 387126512 12845734 635363..636820 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor signal transduction histidine kinase 636820 12845734 Q7A_626 Methylophaga nitratireducenticrescens sensor signal transduction histidine kinase YP_006295117.1 635363 D 754476 CDS YP_006295118.1 387126513 12845735 637015..638391 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component transcriptional regulator 638391 12845735 Q7A_627 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006295118.1 637015 D 754476 CDS YP_006295119.1 387126514 12845736 complement(638393..638800) 1 NC_017857.1 PFAM: Stringent starvation protein B; stringent starvation protein B 638800 12845736 Q7A_628 Methylophaga nitratireducenticrescens stringent starvation protein B YP_006295119.1 638393 R 754476 CDS YP_006295120.1 387126515 12845737 complement(638804..639424) 1 NC_017857.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Stringent starvation protein A 639424 12845737 Q7A_629 Methylophaga nitratireducenticrescens Stringent starvation protein A YP_006295120.1 638804 R 754476 CDS YP_006295121.1 387126516 12845738 complement(639457..640167) 1 NC_017857.1 PFAM: Cytochrome C1 family; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 640167 12845738 Q7A_630 Methylophaga nitratireducenticrescens ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit YP_006295121.1 639457 R 754476 CDS YP_006295122.1 387126517 12845739 complement(640164..641369) 1 NC_017857.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD; Ubiquinol--cytochrome c reductase, cytochrome B subunit 641369 12845739 Q7A_631 Methylophaga nitratireducenticrescens Ubiquinol--cytochrome c reductase, cytochrome B subunit YP_006295122.1 640164 R 754476 CDS YP_006295123.1 387126518 12845740 complement(641375..641968) 1 NC_017857.1 PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Ubiquinol-cytochrome C reductase iron-sulfur subunit 641968 12845740 Q7A_632 Methylophaga nitratireducenticrescens Ubiquinol-cytochrome C reductase iron-sulfur subunit YP_006295123.1 641375 R 754476 CDS YP_006295124.1 387126519 12845741 complement(642140..642586) 1 NC_017857.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; Pseudoazurin precursor 642586 12845741 Q7A_633 Methylophaga nitratireducenticrescens Pseudoazurin precursor YP_006295124.1 642140 R 754476 CDS YP_006295125.1 387126520 12845742 complement(643110..643226) 1 NC_017857.1 hypothetical protein 643226 12845742 Q7A_634 Methylophaga nitratireducenticrescens hypothetical protein YP_006295125.1 643110 R 754476 CDS YP_006295126.1 387126521 12845743 643618..643884 1 NC_017857.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; regulatory-like protein 643884 12845743 Q7A_635 Methylophaga nitratireducenticrescens regulatory-like protein YP_006295126.1 643618 D 754476 CDS YP_006295127.1 387126522 12845744 643893..644525 1 NC_017857.1 PFAM: Protein of unknown function (DUF502); transporter 644525 12845744 Q7A_636 Methylophaga nitratireducenticrescens transporter YP_006295127.1 643893 D 754476 CDS YP_006295128.1 387126523 12845745 644597..646375 1 NC_017857.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase 646375 12845745 Q7A_637 Methylophaga nitratireducenticrescens Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase YP_006295128.1 644597 D 754476 CDS YP_006295129.1 387126524 12845746 646418..647530 1 NC_017857.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase 647530 12845746 Q7A_638 Methylophaga nitratireducenticrescens quinolinate synthetase YP_006295129.1 646418 D 754476 CDS YP_006295130.1 387126525 12845747 647548..647733 1 NC_017857.1 PFAM: Zinc-finger domain; hypothetical protein 647733 12845747 Q7A_639 Methylophaga nitratireducenticrescens hypothetical protein YP_006295130.1 647548 D 754476 CDS YP_006295131.1 387126526 12845748 647737..648138 1 NC_017857.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; mutator mutT protein 648138 12845748 Q7A_640 Methylophaga nitratireducenticrescens mutator mutT protein YP_006295131.1 647737 D 754476 CDS YP_006295132.1 387126527 12845749 complement(648195..648380) 1 NC_017857.1 PFAM: Domain of unknown function (DUF329); zinc-binding protein 648380 12845749 Q7A_641 Methylophaga nitratireducenticrescens zinc-binding protein YP_006295132.1 648195 R 754476 CDS YP_006295133.1 387126528 12845750 complement(648383..649153) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1342); hypothetical protein 649153 12845750 Q7A_642 Methylophaga nitratireducenticrescens hypothetical protein YP_006295133.1 648383 R 754476 CDS YP_006295134.1 387126529 12845751 complement(649199..649807) 1 NC_017857.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 649807 12845751 Q7A_643 Methylophaga nitratireducenticrescens dephospho-CoA kinase YP_006295134.1 649199 R 754476 CDS YP_006295135.1 387126530 12845752 complement(649809..650678) 1 NC_017857.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; Leader peptidase (Prepilin peptidase) / N-methyltransferase 650678 12845752 Q7A_644 Methylophaga nitratireducenticrescens Leader peptidase (Prepilin peptidase) / N-methyltransferase YP_006295135.1 649809 R 754476 CDS YP_006295136.1 387126531 12845753 complement(650683..651930) 1 NC_017857.1 PFAM: Bacterial type II secretion system protein F domain; type IV fimbrial assembly protein PilC 651930 12845753 Q7A_645 Methylophaga nitratireducenticrescens type IV fimbrial assembly protein PilC YP_006295136.1 650683 R 754476 CDS YP_006295137.1 387126532 12845754 complement(651934..653652) 1 NC_017857.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; type IV fimbrial assembly, ATPase PilB 653652 12845754 Q7A_646 Methylophaga nitratireducenticrescens type IV fimbrial assembly, ATPase PilB YP_006295137.1 651934 R 754476 CDS YP_006295138.1 387126533 12845755 653858..653986 1 NC_017857.1 hypothetical protein 653986 12845755 Q7A_647 Methylophaga nitratireducenticrescens hypothetical protein YP_006295138.1 653858 D 754476 CDS YP_006295139.1 387126534 12845756 653989..655242 1 NC_017857.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 655242 12845756 Q7A_648 Methylophaga nitratireducenticrescens diaminopimelate decarboxylase YP_006295139.1 653989 D 754476 CDS YP_006295140.1 387126535 12845757 655247..656095 1 NC_017857.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 656095 12845757 Q7A_649 Methylophaga nitratireducenticrescens diaminopimelate epimerase YP_006295140.1 655247 D 754476 CDS YP_006295141.1 387126536 12845758 656071..656781 1 NC_017857.1 PFAM: Protein of unknown function, DUF484; hypothetical protein 656781 12845758 Q7A_650 Methylophaga nitratireducenticrescens hypothetical protein YP_006295141.1 656071 D 754476 CDS YP_006295142.1 387126537 12845759 656771..657679 1 NC_017857.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerC 657679 12845759 Q7A_651 Methylophaga nitratireducenticrescens tyrosine recombinase XerC YP_006295142.1 656771 D 754476 CDS YP_006295143.1 387126538 12845760 657934..658953 1 NC_017857.1 PFAM: Sodium/calcium exchanger protein; Cation antiporter 658953 12845760 Q7A_652 Methylophaga nitratireducenticrescens Cation antiporter YP_006295143.1 657934 D 754476 CDS YP_006295144.1 387126539 12845761 complement(659447..660262) 1 NC_017857.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 660262 12845761 Q7A_653 Methylophaga nitratireducenticrescens transposase YP_006295144.1 659447 R 754476 CDS YP_006295145.1 387126540 12845762 complement(660661..662058) 1 NC_017857.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; Deoxyribodipyrimidine photolyase 662058 12845762 Q7A_654 Methylophaga nitratireducenticrescens Deoxyribodipyrimidine photolyase YP_006295145.1 660661 R 754476 CDS YP_006295146.1 387126541 12845763 complement(662068..663600) 1 NC_017857.1 PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; alpha-deoxyribodipyrimidine photolyase-related protein 663600 12845763 Q7A_655 Methylophaga nitratireducenticrescens alpha-deoxyribodipyrimidine photolyase-related protein YP_006295146.1 662068 R 754476 CDS YP_006295147.1 387126542 12845764 complement(663593..664006) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3429); hypothetical protein 664006 12845764 Q7A_656 Methylophaga nitratireducenticrescens hypothetical protein YP_006295147.1 663593 R 754476 CDS YP_006295148.1 387126543 12845765 complement(664003..665451) 1 NC_017857.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon 665451 12845765 Q7A_657 Methylophaga nitratireducenticrescens DNA polymerase III subunit epsilon YP_006295148.1 664003 R 754476 CDS YP_006295149.1 387126544 12845848 665768..666652 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 666652 12845848 Q7A_658 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006295149.1 665768 D 754476 CDS YP_006295150.1 387126545 12845849 complement(666683..667234) 1 NC_017857.1 PFAM: Exonuclease; 3'-to-5' oligoribonuclease 667234 12845849 Q7A_659 Methylophaga nitratireducenticrescens 3'-to-5' oligoribonuclease YP_006295150.1 666683 R 754476 CDS YP_006295151.1 387126546 12845850 667344..668591 1 NC_017857.1 PFAM: Peptidase family M48; macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides; hypothetical protein 668591 12845850 Q7A_660 Methylophaga nitratireducenticrescens hypothetical protein YP_006295151.1 667344 D 754476 CDS YP_006295152.1 387126547 12845851 668754..668870 1 NC_017857.1 hypothetical protein 668870 12845851 Q7A_661 Methylophaga nitratireducenticrescens hypothetical protein YP_006295152.1 668754 D 754476 CDS YP_006295153.1 387126548 12845852 complement(668871..669908) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 669908 12845852 Q7A_662 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295153.1 668871 R 754476 CDS YP_006295154.1 387126549 12845853 complement(669935..671188) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; long-chain-fatty-acid--CoA ligase 671188 12845853 Q7A_663 Methylophaga nitratireducenticrescens long-chain-fatty-acid--CoA ligase YP_006295154.1 669935 R 754476 CDS YP_006295155.1 387126550 12845854 complement(671196..671642) 1 NC_017857.1 PFAM: Universal stress protein family; Universal stress protein 671642 12845854 Q7A_664 Methylophaga nitratireducenticrescens Universal stress protein YP_006295155.1 671196 R 754476 CDS YP_006295156.1 387126551 12845855 complement(671697..672635) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 672635 12845855 Q7A_665 Methylophaga nitratireducenticrescens thioredoxin reductase YP_006295156.1 671697 R 754476 CDS YP_006295157.1 387126552 12845856 673038..675341 1 NC_017857.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK 675341 12845856 Q7A_666 Methylophaga nitratireducenticrescens cell division protein FtsK YP_006295157.1 673038 D 754476 CDS YP_006295158.1 387126553 12845857 675402..676034 1 NC_017857.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; outer membrane lipoprotein carrier protein LolA 676034 12845857 Q7A_667 Methylophaga nitratireducenticrescens outer membrane lipoprotein carrier protein LolA YP_006295158.1 675402 D 754476 CDS YP_006295159.1 387126554 12845858 676034..677356 1 NC_017857.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase 677356 12845858 Q7A_668 Methylophaga nitratireducenticrescens Holliday junction DNA helicase YP_006295159.1 676034 D 754476 CDS YP_006295160.1 387126555 12845859 complement(677363..678118) 1 NC_017857.1 PFAM: Protein of unknown function (DUF548); SAM-dependent methyltransferase 678118 12845859 Q7A_669 Methylophaga nitratireducenticrescens SAM-dependent methyltransferase YP_006295160.1 677363 R 754476 CDS YP_006295161.1 387126556 12845860 complement(678125..679117) 1 NC_017857.1 PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; hypothetical protein 679117 12845860 Q7A_670 Methylophaga nitratireducenticrescens hypothetical protein YP_006295161.1 678125 R 754476 CDS YP_006295162.1 387126557 12845861 complement(679117..679680) 1 NC_017857.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MxaD 679680 12845861 Q7A_671 Methylophaga nitratireducenticrescens MxaD YP_006295162.1 679117 R 754476 CDS YP_006295163.1 387126558 12845862 679883..680689 1 NC_017857.1 PFAM: ABC transporter; ABC transporter, ATP-binding protein YrbF 680689 12845862 Q7A_672 Methylophaga nitratireducenticrescens ABC transporter, ATP-binding protein YrbF YP_006295163.1 679883 D 754476 CDS YP_006295164.1 387126559 12845863 680686..681468 1 NC_017857.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; ABC transporter, permease component YrbE 681468 12845863 Q7A_673 Methylophaga nitratireducenticrescens ABC transporter, permease component YrbE YP_006295164.1 680686 D 754476 CDS YP_006295165.1 387126560 12845864 681469..681933 1 NC_017857.1 PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; ABC transporter, periplasmic component YrbD 681933 12845864 Q7A_674 Methylophaga nitratireducenticrescens ABC transporter, periplasmic component YrbD YP_006295165.1 681469 D 754476 CDS YP_006295166.1 387126561 12845865 681935..682561 1 NC_017857.1 PFAM: Toluene tolerance, Ttg2; Toluene tolerance protein 682561 12845865 Q7A_675 Methylophaga nitratireducenticrescens Toluene tolerance protein YP_006295166.1 681935 D 754476 CDS YP_006295167.1 387126562 12845866 682558..682854 1 NC_017857.1 sulfate transporter/antisigma-factor antagonist STAS 682854 12845866 Q7A_676 Methylophaga nitratireducenticrescens sulfate transporter/antisigma-factor antagonist STAS YP_006295167.1 682558 D 754476 CDS YP_006295168.1 387126563 12845867 682876..683100 1 NC_017857.1 PFAM: BolA-like protein; transcriptional regulator BolA-like protein 683100 12845867 Q7A_677 Methylophaga nitratireducenticrescens transcriptional regulator BolA-like protein YP_006295168.1 682876 D 754476 CDS YP_006295169.1 387126564 12845868 683131..684417 1 NC_017857.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 684417 12845868 Q7A_678 Methylophaga nitratireducenticrescens UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006295169.1 683131 D 754476 CDS YP_006295170.1 387126565 12845869 684410..685054 1 NC_017857.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit 685054 12845869 Q7A_679 Methylophaga nitratireducenticrescens ATP phosphoribosyltransferase catalytic subunit YP_006295170.1 684410 D 754476 CDS YP_006295171.1 387126566 12845870 685047..686351 1 NC_017857.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 686351 12845870 Q7A_680 Methylophaga nitratireducenticrescens histidinol dehydrogenase YP_006295171.1 685047 D 754476 CDS YP_006295172.1 387126567 12845871 686351..687406 1 NC_017857.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 687406 12845871 Q7A_681 Methylophaga nitratireducenticrescens histidinol-phosphate aminotransferase YP_006295172.1 686351 D 754476 CDS YP_006295173.1 387126568 12845872 complement(687403..688071) 1 NC_017857.1 hypothetical protein 688071 12845872 Q7A_682 Methylophaga nitratireducenticrescens hypothetical protein YP_006295173.1 687403 R 754476 CDS YP_006295174.1 387126569 12845873 688099..688860 1 NC_017857.1 PFAM: Sulfite exporter TauE/SafE; permease 688860 12845873 Q7A_683 Methylophaga nitratireducenticrescens permease YP_006295174.1 688099 D 754476 CDS YP_006295175.1 387126570 12845874 complement(689131..689772) 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 689772 12845874 Q7A_684 Methylophaga nitratireducenticrescens orotate phosphoribosyltransferase YP_006295175.1 689131 R 754476 CDS YP_006295176.1 387126571 12845875 complement(689769..690371) 1 NC_017857.1 PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; methionine biosynthesis protein MetW 690371 12845875 Q7A_685 Methylophaga nitratireducenticrescens methionine biosynthesis protein MetW YP_006295176.1 689769 R 754476 CDS YP_006295177.1 387126572 12845876 complement(690371..691519) 1 NC_017857.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine O-acetyltransferase 691519 12845876 Q7A_686 Methylophaga nitratireducenticrescens homoserine O-acetyltransferase YP_006295177.1 690371 R 754476 CDS YP_006295178.1 387126573 12845877 complement(691541..692116) 1 NC_017857.1 PFAM: YGGT family; integral membrane protein YggT 692116 12845877 Q7A_687 Methylophaga nitratireducenticrescens integral membrane protein YggT YP_006295178.1 691541 R 754476 CDS YP_006295179.1 387126574 12845878 complement(692109..692942) 1 NC_017857.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 692942 12845878 Q7A_688 Methylophaga nitratireducenticrescens pyrroline-5-carboxylate reductase YP_006295179.1 692109 R 754476 CDS YP_006295180.1 387126575 12845879 complement(692991..693689) 1 NC_017857.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate enzyme 693689 12845879 Q7A_689 Methylophaga nitratireducenticrescens pyridoxal phosphate enzyme YP_006295180.1 692991 R 754476 CDS YP_006295181.1 387126576 12845880 693781..694818 1 NC_017857.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 694818 12845880 Q7A_690 Methylophaga nitratireducenticrescens twitching motility protein PilT YP_006295181.1 693781 D 754476 CDS YP_006295182.1 387126577 12845881 694828..695970 1 NC_017857.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 695970 12845881 Q7A_691 Methylophaga nitratireducenticrescens twitching motility protein PilT YP_006295182.1 694828 D 754476 CDS YP_006295183.1 387126578 12845882 696143..696994 1 NC_017857.1 PFAM: OmpA family; outer membrane protein A precursor 696994 12845882 Q7A_692 Methylophaga nitratireducenticrescens outer membrane protein A precursor YP_006295183.1 696143 D 754476 CDS YP_006295184.1 387126579 12845883 697396..697587 1 NC_017857.1 PFAM: CsbD-like; CsbD family protein 697587 12845883 Q7A_693 Methylophaga nitratireducenticrescens CsbD family protein YP_006295184.1 697396 D 754476 CDS YP_006295185.1 387126580 12845884 697806..698363 1 NC_017857.1 PFAM: Putative phospholipid-binding domain; hypothetical protein 698363 12845884 Q7A_694 Methylophaga nitratireducenticrescens hypothetical protein YP_006295185.1 697806 D 754476 CDS YP_006295186.1 387126581 12845885 698371..698832 1 NC_017857.1 hypothetical protein 698832 12845885 Q7A_695 Methylophaga nitratireducenticrescens hypothetical protein YP_006295186.1 698371 D 754476 CDS YP_006295187.1 387126582 12845886 699053..700279 1 NC_017857.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family sigma-54 specific transcriptional regulator 700279 12845886 Q7A_696 Methylophaga nitratireducenticrescens Fis family sigma-54 specific transcriptional regulator YP_006295187.1 699053 D 754476 CDS YP_006295188.1 387126583 12845887 complement(700458..701771) 1 NC_017857.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain; HipA protein 701771 12845887 Q7A_697 Methylophaga nitratireducenticrescens HipA protein YP_006295188.1 700458 R 754476 CDS YP_006295189.1 387126584 12845888 complement(701773..702024) 1 NC_017857.1 PFAM: Helix-turn-helix; transcriptional regulator 702024 12845888 Q7A_698 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295189.1 701773 R 754476 CDS YP_006295190.1 387126585 12845889 702269..702439 1 NC_017857.1 transposase, IS982 family 702439 12845889 Q7A_699 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006295190.1 702269 D 754476 CDS YP_006295191.1 387126586 12845890 702447..702818 1 NC_017857.1 resolvase 702818 12845890 Q7A_700 Methylophaga nitratireducenticrescens resolvase YP_006295191.1 702447 D 754476 CDS YP_006295192.1 387126587 12845891 703366..703719 1 NC_017857.1 hypothetical protein 703719 12845891 Q7A_701 Methylophaga nitratireducenticrescens hypothetical protein YP_006295192.1 703366 D 754476 CDS YP_006295193.1 387126588 12845892 704176..704361 1 NC_017857.1 hypothetical protein 704361 12845892 Q7A_702 Methylophaga nitratireducenticrescens hypothetical protein YP_006295193.1 704176 D 754476 CDS YP_006295194.1 387126589 12845893 704394..705029 1 NC_017857.1 PFAM: Integrase core domain; transposase 705029 12845893 Q7A_703 Methylophaga nitratireducenticrescens transposase YP_006295194.1 704394 D 754476 CDS YP_006295195.1 387126590 12845894 705333..706010 1 NC_017857.1 PFAM: SNARE associated Golgi protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 706010 12845894 Q7A_704 Methylophaga nitratireducenticrescens phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase YP_006295195.1 705333 D 754476 CDS YP_006295196.1 387126591 12845895 complement(706028..708250) 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 708250 12845895 Q7A_705 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295196.1 706028 R 754476 CDS YP_006295197.1 387126592 12845896 708681..709388 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two component Transcriptional regulator 709388 12845896 Q7A_706 Methylophaga nitratireducenticrescens two component Transcriptional regulator YP_006295197.1 708681 D 754476 CDS YP_006295198.1 387126593 12845897 709385..710662 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor 710662 12845897 Q7A_707 Methylophaga nitratireducenticrescens two-component sensor YP_006295198.1 709385 D 754476 CDS YP_006295199.1 387126594 12845898 710797..711045 1 NC_017857.1 PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 711045 12845898 Q7A_708 Methylophaga nitratireducenticrescens diacylglycerol kinase YP_006295199.1 710797 D 754476 CDS YP_006295200.1 387126595 12845899 711082..713040 1 NC_017857.1 PFAM: Sulfatase; phosphoglycerol transferase I 713040 12845899 Q7A_709 Methylophaga nitratireducenticrescens phosphoglycerol transferase I YP_006295200.1 711082 D 754476 CDS YP_006295201.1 387126596 12845900 complement(713109..713717) 1 NC_017857.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 713717 12845900 Q7A_710 Methylophaga nitratireducenticrescens undecaprenyl-diphosphatase YP_006295201.1 713109 R 754476 CDS YP_006295202.1 387126597 12845901 complement(714190..714402) 1 NC_017857.1 hypothetical protein 714402 12845901 Q7A_711 Methylophaga nitratireducenticrescens hypothetical protein YP_006295202.1 714190 R 754476 CDS YP_006295203.1 387126598 12845902 complement(714512..714820) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3423); hypothetical protein 714820 12845902 Q7A_712 Methylophaga nitratireducenticrescens hypothetical protein YP_006295203.1 714512 R 754476 CDS YP_006295204.1 387126599 12845903 715214..715438 1 NC_017857.1 hypothetical protein 715438 12845903 Q7A_713 Methylophaga nitratireducenticrescens hypothetical protein YP_006295204.1 715214 D 754476 CDS YP_006295205.1 387126600 12845904 716589..716792 1 NC_017857.1 hypothetical protein 716792 12845904 Q7A_714 Methylophaga nitratireducenticrescens hypothetical protein YP_006295205.1 716589 D 754476 CDS YP_006295206.1 387126601 12845905 complement(716987..717235) 1 NC_017857.1 HipA protein 717235 12845905 Q7A_715 Methylophaga nitratireducenticrescens HipA protein YP_006295206.1 716987 R 754476 CDS YP_006295207.1 387126602 12845906 717362..717721 1 NC_017857.1 PFAM: Transposase; transposase 717721 12845906 Q7A_716 Methylophaga nitratireducenticrescens transposase YP_006295207.1 717362 D 754476 CDS YP_006295208.1 387126603 12845907 717718..718062 1 NC_017857.1 PFAM: IS66 Orf2 like protein; transposase 718062 12845907 Q7A_717 Methylophaga nitratireducenticrescens transposase YP_006295208.1 717718 D 754476 CDS YP_006295209.1 387126604 12845908 718113..719645 1 NC_017857.1 PFAM: Transposase IS66 family; transposase 719645 12845908 Q7A_718 Methylophaga nitratireducenticrescens transposase YP_006295209.1 718113 D 754476 CDS YP_006295210.1 387126605 12845909 complement(719657..720694) 1 NC_017857.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain; HipA protein 720694 12845909 Q7A_719 Methylophaga nitratireducenticrescens HipA protein YP_006295210.1 719657 R 754476 CDS YP_006295211.1 387126606 12845910 complement(720696..720947) 1 NC_017857.1 PFAM: Helix-turn-helix; transcriptional regulator 720947 12845910 Q7A_720 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295211.1 720696 R 754476 CDS YP_006295212.1 387126607 12845911 721186..722514 1 NC_017857.1 hypothetical protein 722514 12845911 Q7A_721 Methylophaga nitratireducenticrescens hypothetical protein YP_006295212.1 721186 D 754476 CDS YP_006295213.1 387126608 12845912 723353..724162 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); hypothetical protein 724162 12845912 Q7A_722 Methylophaga nitratireducenticrescens hypothetical protein YP_006295213.1 723353 D 754476 CDS YP_006295214.1 387126609 12845913 724143..727067 1 NC_017857.1 hypothetical protein 727067 12845913 Q7A_723 Methylophaga nitratireducenticrescens hypothetical protein YP_006295214.1 724143 D 754476 CDS YP_006295215.1 387126610 12845914 727060..728466 1 NC_017857.1 hypothetical protein 728466 12845914 Q7A_724 Methylophaga nitratireducenticrescens hypothetical protein YP_006295215.1 727060 D 754476 CDS YP_006295216.1 387126611 12845915 728459..729076 1 NC_017857.1 hypothetical protein 729076 12845915 Q7A_725 Methylophaga nitratireducenticrescens hypothetical protein YP_006295216.1 728459 D 754476 CDS YP_006295217.1 387126612 12845916 729443..730549 1 NC_017857.1 hypothetical protein 730549 12845916 Q7A_726 Methylophaga nitratireducenticrescens hypothetical protein YP_006295217.1 729443 D 754476 CDS YP_006295218.1 387126613 12845917 730593..731120 1 NC_017857.1 hypothetical protein 731120 12845917 Q7A_727 Methylophaga nitratireducenticrescens hypothetical protein YP_006295218.1 730593 D 754476 CDS YP_006295219.1 387126614 12845918 731433..731681 1 NC_017857.1 hypothetical protein 731681 12845918 Q7A_728 Methylophaga nitratireducenticrescens hypothetical protein YP_006295219.1 731433 D 754476 CDS YP_006295220.1 387126615 12845919 732085..733533 1 NC_017857.1 PFAM: ThiF family; molybdopterin biosynthesis protein MoeB 733533 12845919 Q7A_729 Methylophaga nitratireducenticrescens molybdopterin biosynthesis protein MoeB YP_006295220.1 732085 D 754476 CDS YP_006295221.1 387126616 12845920 734444..739723 1 NC_017857.1 PFAM: Phage integrase family; phage integrase family protein 739723 12845920 Q7A_730 Methylophaga nitratireducenticrescens phage integrase family protein YP_006295221.1 734444 D 754476 CDS YP_006295222.1 387126617 12845921 complement(739720..740547) 1 NC_017857.1 hypothetical protein 740547 12845921 Q7A_731 Methylophaga nitratireducenticrescens hypothetical protein YP_006295222.1 739720 R 754476 CDS YP_006295223.1 387126618 12845922 complement(740804..741091) 1 NC_017857.1 hypothetical protein 741091 12845922 Q7A_732 Methylophaga nitratireducenticrescens hypothetical protein YP_006295223.1 740804 R 754476 CDS YP_006295224.1 387126619 12845923 complement(741103..742284) 1 NC_017857.1 PFAM: Domain of unknown function (DUF3596); Phage integrase family; phage integrase 742284 12845923 Q7A_733 Methylophaga nitratireducenticrescens phage integrase YP_006295224.1 741103 R 754476 CDS YP_006295225.1 387126620 12845924 742887..745202 1 NC_017857.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R 745202 12845924 Q7A_734 Methylophaga nitratireducenticrescens type I restriction-modification system, restriction subunit R YP_006295225.1 742887 D 754476 CDS YP_006295226.1 387126621 12845925 745206..746960 1 NC_017857.1 ABC transporter ATP-binding protein 746960 12845925 Q7A_735 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006295226.1 745206 D 754476 CDS YP_006295227.1 387126622 12845926 746963..748441 1 NC_017857.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M 748441 12845926 Q7A_736 Methylophaga nitratireducenticrescens type I restriction-modification system, DNA-methyltransferase subunit M YP_006295227.1 746963 D 754476 CDS YP_006295228.1 387126623 12845927 748444..749688 1 NC_017857.1 PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 749688 12845927 Q7A_737 Methylophaga nitratireducenticrescens type I restriction-modification system, specificity subunit S YP_006295228.1 748444 D 754476 CDS YP_006295229.1 387126624 12845928 749698..750840 1 NC_017857.1 hypothetical protein 750840 12845928 Q7A_738 Methylophaga nitratireducenticrescens hypothetical protein YP_006295229.1 749698 D 754476 CDS YP_006295230.1 387126625 12845929 750842..752584 1 NC_017857.1 PFAM: Domain of unknown function DUF87; Bipolar DNA helicase 752584 12845929 Q7A_739 Methylophaga nitratireducenticrescens Bipolar DNA helicase YP_006295230.1 750842 D 754476 CDS YP_006295231.1 387126626 12846013 complement(753192..755699) 1 NC_017857.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase 755699 12846013 Q7A_741 Methylophaga nitratireducenticrescens glycogen phosphorylase YP_006295231.1 753192 R 754476 CDS YP_006295232.1 387126627 12846014 complement(755906..756520) 1 NC_017857.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; GTP-binding protein EngB 756520 12846014 Q7A_742 Methylophaga nitratireducenticrescens GTP-binding protein EngB YP_006295232.1 755906 R 754476 CDS YP_006295233.1 387126628 12846015 756606..757214 1 NC_017857.1 PFAM: Cytochrome c; cytochrome c4 757214 12846015 Q7A_743 Methylophaga nitratireducenticrescens cytochrome c4 YP_006295233.1 756606 D 754476 CDS YP_006295234.1 387126629 12846016 757290..759296 1 NC_017857.1 PFAM: ResB-like family; cytochrome c-type biogenesis protein Ccs1/ResB 759296 12846016 Q7A_744 Methylophaga nitratireducenticrescens cytochrome c-type biogenesis protein Ccs1/ResB YP_006295234.1 757290 D 754476 CDS YP_006295235.1 387126630 12846017 759337..760485 1 NC_017857.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; cytochrome c-type biogenesis protein CcsA/ResC 760485 12846017 Q7A_745 Methylophaga nitratireducenticrescens cytochrome c-type biogenesis protein CcsA/ResC YP_006295235.1 759337 D 754476 CDS YP_006295236.1 387126631 12846018 760507..761148 1 NC_017857.1 PFAM: DSBA-like thioredoxin domain; periplasmic thiol:disulfide interchange protein DsbA 761148 12846018 Q7A_746 Methylophaga nitratireducenticrescens periplasmic thiol:disulfide interchange protein DsbA YP_006295236.1 760507 D 754476 CDS YP_006295237.1 387126632 12846019 complement(761201..762622) 1 NC_017857.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; transglycosylase 762622 12846019 Q7A_747 Methylophaga nitratireducenticrescens transglycosylase YP_006295237.1 761201 R 754476 CDS YP_006295238.1 387126633 12846020 complement(762701..763150) 1 NC_017857.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; tRNA-specific adenosine-34 deaminase 763150 12846020 Q7A_748 Methylophaga nitratireducenticrescens tRNA-specific adenosine-34 deaminase YP_006295238.1 762701 R 754476 CDS YP_006295239.1 387126634 12846021 complement(763137..764411) 1 NC_017857.1 PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); 3-deoxy-D-manno-octulosonic-acid transferase 764411 12846021 Q7A_749 Methylophaga nitratireducenticrescens 3-deoxy-D-manno-octulosonic-acid transferase YP_006295239.1 763137 R 754476 CDS YP_006295240.1 387126635 12846022 764496..765443 1 NC_017857.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 765443 12846022 Q7A_750 Methylophaga nitratireducenticrescens lipid A biosynthesis lauroyl acyltransferase YP_006295240.1 764496 D 754476 CDS YP_006295241.1 387126636 12846023 complement(765412..765900) 1 NC_017857.1 PFAM: Lipid A 3-O-deacylase (PagL); lipid A 3-O-deacylase (PagL) 765900 12846023 Q7A_751 Methylophaga nitratireducenticrescens lipid A 3-O-deacylase (PagL) YP_006295241.1 765412 R 754476 CDS YP_006295242.1 387126637 12846024 complement(766026..766415) 1 NC_017857.1 PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 766415 12846024 Q7A_752 Methylophaga nitratireducenticrescens 30S ribosomal protein S9 YP_006295242.1 766026 R 754476 CDS YP_006295243.1 387126638 12846025 complement(766428..766856) 1 NC_017857.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 766856 12846025 Q7A_753 Methylophaga nitratireducenticrescens 50S ribosomal protein L13 YP_006295243.1 766428 R 754476 CDS YP_006295244.1 387126639 12846026 complement(766943..767740) 1 NC_017857.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 767740 12846026 Q7A_754 Methylophaga nitratireducenticrescens undecaprenyl-diphosphatase YP_006295244.1 766943 R 754476 CDS YP_006295245.1 387126640 12846027 767948..771721 1 NC_017857.1 PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain; FAD/FMN-containing dehydrogenase 771721 12846027 Q7A_755 Methylophaga nitratireducenticrescens FAD/FMN-containing dehydrogenase YP_006295245.1 767948 D 754476 CDS YP_006295246.1 387126641 12846028 complement(771783..772130) 1 NC_017857.1 PFAM: HopJ type III effector protein; type III effector HopPmaJ 772130 12846028 Q7A_756 Methylophaga nitratireducenticrescens type III effector HopPmaJ YP_006295246.1 771783 R 754476 CDS YP_006295247.1 387126642 12846029 complement(772146..772811) 1 NC_017857.1 PFAM: Nitroreductase family; nitroreductase 772811 12846029 Q7A_757 Methylophaga nitratireducenticrescens nitroreductase YP_006295247.1 772146 R 754476 CDS YP_006295248.1 387126643 12846030 complement(772801..773190) 1 NC_017857.1 PFAM: Protein of unknown function (DUF454); hypothetical protein 773190 12846030 Q7A_758 Methylophaga nitratireducenticrescens hypothetical protein YP_006295248.1 772801 R 754476 CDS YP_006295249.1 387126644 12846031 773532..773654 1 NC_017857.1 hypothetical protein 773654 12846031 Q7A_759 Methylophaga nitratireducenticrescens hypothetical protein YP_006295249.1 773532 D 754476 CDS YP_006295250.1 387126645 12846032 773706..774614 1 NC_017857.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; 50S ribosomal subunit maturation GTPase RbgA 774614 12846032 Q7A_760 Methylophaga nitratireducenticrescens 50S ribosomal subunit maturation GTPase RbgA YP_006295250.1 773706 D 754476 CDS YP_006295251.1 387126646 12846033 774698..775213 1 NC_017857.1 PFAM: Outer membrane lipoprotein Slp family; Starvation lipoprotein Slp-like protein 775213 12846033 Q7A_761 Methylophaga nitratireducenticrescens Starvation lipoprotein Slp-like protein YP_006295251.1 774698 D 754476 CDS YP_006295252.1 387126647 12846034 775322..775507 1 NC_017857.1 hypothetical protein 775507 12846034 Q7A_762 Methylophaga nitratireducenticrescens hypothetical protein YP_006295252.1 775322 D 754476 CDS YP_006295253.1 387126648 12846035 775510..775776 1 NC_017857.1 hypothetical protein 775776 12846035 Q7A_763 Methylophaga nitratireducenticrescens hypothetical protein YP_006295253.1 775510 D 754476 CDS YP_006295254.1 387126649 12846036 775807..776025 1 NC_017857.1 hypothetical protein 776025 12846036 Q7A_764 Methylophaga nitratireducenticrescens hypothetical protein YP_006295254.1 775807 D 754476 CDS YP_006295255.1 387126650 12846037 776198..776905 1 NC_017857.1 pepSY-associated TM helix family protein 776905 12846037 Q7A_765 Methylophaga nitratireducenticrescens pepSY-associated TM helix family protein YP_006295255.1 776198 D 754476 CDS YP_006295256.1 387126651 12846038 776952..777908 1 NC_017857.1 hypothetical protein 777908 12846038 Q7A_766 Methylophaga nitratireducenticrescens hypothetical protein YP_006295256.1 776952 D 754476 CDS YP_006295257.1 387126652 12846039 777905..779371 1 NC_017857.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating); 6-phosphogluconate dehydrogenase 779371 12846039 Q7A_767 Methylophaga nitratireducenticrescens 6-phosphogluconate dehydrogenase YP_006295257.1 777905 D 754476 CDS YP_006295258.1 387126653 12846040 complement(779431..780297) 1 NC_017857.1 PFAM: SdiA-regulated; hypothetical protein 780297 12846040 Q7A_768 Methylophaga nitratireducenticrescens hypothetical protein YP_006295258.1 779431 R 754476 CDS YP_006295259.1 387126654 12846041 complement(780423..780854) 1 NC_017857.1 hypothetical protein 780854 12846041 Q7A_769 Methylophaga nitratireducenticrescens hypothetical protein YP_006295259.1 780423 R 754476 CDS YP_006295260.1 387126655 12846042 complement(780881..781096) 1 NC_017857.1 PFAM: Acylphosphatase; acylphosphatase 781096 12846042 Q7A_770 Methylophaga nitratireducenticrescens acylphosphatase YP_006295260.1 780881 R 754476 CDS YP_006295261.1 387126656 12846043 complement(781516..782301) 1 NC_017857.1 hypothetical protein 782301 12846043 Q7A_771 Methylophaga nitratireducenticrescens hypothetical protein YP_006295261.1 781516 R 754476 CDS YP_006295262.1 387126657 12846044 complement(782369..783238) 1 NC_017857.1 Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase 783238 12846044 Q7A_772 Methylophaga nitratireducenticrescens Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase YP_006295262.1 782369 R 754476 CDS YP_006295263.1 387126658 12846045 complement(783266..784231) 1 NC_017857.1 hypothetical protein 784231 12846045 Q7A_773 Methylophaga nitratireducenticrescens hypothetical protein YP_006295263.1 783266 R 754476 CDS YP_006295264.1 387126659 12846046 784618..785376 1 NC_017857.1 hypothetical protein 785376 12846046 Q7A_774 Methylophaga nitratireducenticrescens hypothetical protein YP_006295264.1 784618 D 754476 CDS YP_006295265.1 387126660 12846047 785388..785534 1 NC_017857.1 hypothetical protein 785534 12846047 Q7A_775 Methylophaga nitratireducenticrescens hypothetical protein YP_006295265.1 785388 D 754476 CDS YP_006295266.1 387126661 12846048 785574..785705 1 NC_017857.1 hypothetical protein 785705 12846048 Q7A_776 Methylophaga nitratireducenticrescens hypothetical protein YP_006295266.1 785574 D 754476 CDS YP_006295267.1 387126662 12846049 complement(785878..786279) 1 NC_017857.1 hypothetical protein 786279 12846049 Q7A_777 Methylophaga nitratireducenticrescens hypothetical protein YP_006295267.1 785878 R 754476 CDS YP_006295268.1 387126663 12846050 complement(786504..787142) 1 NC_017857.1 hypothetical protein 787142 12846050 Q7A_778 Methylophaga nitratireducenticrescens hypothetical protein YP_006295268.1 786504 R 754476 CDS YP_006295269.1 387126664 12846051 complement(787755..789332) 1 NC_017857.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 789332 12846051 Q7A_779 Methylophaga nitratireducenticrescens GMP synthase YP_006295269.1 787755 R 754476 CDS YP_006295270.1 387126665 12846052 complement(789393..790856) 1 NC_017857.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase 790856 12846052 Q7A_780 Methylophaga nitratireducenticrescens inosine-5'-monophosphate dehydrogenase YP_006295270.1 789393 R 754476 CDS YP_006295271.1 387126666 12846053 790919..792421 1 NC_017857.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit 792421 12846053 Q7A_781 Methylophaga nitratireducenticrescens Exodeoxyribonuclease VII large subunit YP_006295271.1 790919 D 754476 CDS YP_006295272.1 387126667 12846054 792418..793254 1 NC_017857.1 PFAM: Peptidase family M23; metalloendopeptidases- like membrane protein 793254 12846054 Q7A_782 Methylophaga nitratireducenticrescens metalloendopeptidases- like membrane protein YP_006295272.1 792418 D 754476 CDS YP_006295273.1 387126668 12846055 complement(793236..795911) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; NMT1/THI5 like; PAS fold; TIGRFAM: PAS domain S-box; PAS protein 795911 12846055 Q7A_783 Methylophaga nitratireducenticrescens PAS protein YP_006295273.1 793236 R 754476 CDS YP_006295274.1 387126669 12846056 complement(796315..797040) 1 NC_017857.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; lipopolysaccharide ABC transporter, ATP-binding protein LptB 797040 12846056 Q7A_784 Methylophaga nitratireducenticrescens lipopolysaccharide ABC transporter, ATP-binding protein LptB YP_006295274.1 796315 R 754476 CDS YP_006295275.1 387126670 12846057 complement(797054..797863) 1 NC_017857.1 PFAM: OstA-like protein; Bacterial SH3 domain; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; LptA-like protein 797863 12846057 Q7A_785 Methylophaga nitratireducenticrescens LptA-like protein YP_006295275.1 797054 R 754476 CDS YP_006295276.1 387126671 12846058 complement(797844..798371) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1239); hypothetical protein 798371 12846058 Q7A_786 Methylophaga nitratireducenticrescens hypothetical protein YP_006295276.1 797844 R 754476 CDS YP_006295277.1 387126672 12846059 complement(798397..798918) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 798918 12846059 Q7A_787 Methylophaga nitratireducenticrescens 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_006295277.1 798397 R 754476 CDS YP_006295278.1 387126673 12846060 complement(798934..799911) 1 NC_017857.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; arabinose 5-phosphate isomerase 799911 12846060 Q7A_788 Methylophaga nitratireducenticrescens arabinose 5-phosphate isomerase YP_006295278.1 798934 R 754476 CDS YP_006295279.1 387126674 12846061 complement(799908..800894) 1 NC_017857.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG 800894 12846061 Q7A_789 Methylophaga nitratireducenticrescens inner membrane protein YrbG YP_006295279.1 799908 R 754476 CDS YP_006295280.1 387126675 12846062 complement(800990..801718) 1 NC_017857.1 PFAM: VacJ like lipoprotein; surface lipoprotein 801718 12846062 Q7A_790 Methylophaga nitratireducenticrescens surface lipoprotein YP_006295280.1 800990 R 754476 CDS YP_006295281.1 387126676 12846063 complement(801847..802893) 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 802893 12846063 Q7A_791 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295281.1 801847 R 754476 CDS YP_006295282.1 387126677 12846064 complement(802893..803687) 1 NC_017857.1 Ser/Thr protein phosphatase family protein; UDP-2,3-diacylglucosamine hydrolase-like protein 803687 12846064 Q7A_792 Methylophaga nitratireducenticrescens UDP-2,3-diacylglucosamine hydrolase-like protein YP_006295282.1 802893 R 754476 CDS YP_006295283.1 387126678 12846065 803746..805866 1 NC_017857.1 PFAM: Peptidase family M3; oligopeptidase A 805866 12846065 Q7A_793 Methylophaga nitratireducenticrescens oligopeptidase A YP_006295283.1 803746 D 754476 CDS YP_006295284.1 387126679 12846066 complement(805955..806371) 1 NC_017857.1 hypothetical protein 806371 12846066 Q7A_794 Methylophaga nitratireducenticrescens hypothetical protein YP_006295284.1 805955 R 754476 CDS YP_006295285.1 387126680 12846067 806451..806594 1 NC_017857.1 hypothetical protein 806594 12846067 Q7A_795 Methylophaga nitratireducenticrescens hypothetical protein YP_006295285.1 806451 D 754476 CDS YP_006295286.1 387126681 12846068 complement(806631..806897) 1 NC_017857.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; DnaK suppressor protein 806897 12846068 Q7A_796 Methylophaga nitratireducenticrescens DnaK suppressor protein YP_006295286.1 806631 R 754476 CDS YP_006295287.1 387126682 12846069 complement(807408..807671) 1 NC_017857.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; YoeB toxin protein 807671 12846069 Q7A_797 Methylophaga nitratireducenticrescens YoeB toxin protein YP_006295287.1 807408 R 754476 CDS YP_006295288.1 387126683 12846070 complement(807664..807918) 1 NC_017857.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; YefM protein (antitoxin to YoeB) 807918 12846070 Q7A_798 Methylophaga nitratireducenticrescens YefM protein (antitoxin to YoeB) YP_006295288.1 807664 R 754476 CDS YP_006295289.1 387126684 12846071 808122..808259 1 NC_017857.1 hypothetical protein 808259 12846071 Q7A_799 Methylophaga nitratireducenticrescens hypothetical protein YP_006295289.1 808122 D 754476 CDS YP_006295290.1 387126685 12846072 809041..810525 1 NC_017857.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase 810525 12846072 Q7A_800 Methylophaga nitratireducenticrescens 3-polyprenyl-4-hydroxybenzoate carboxy-lyase YP_006295290.1 809041 D 754476 CDS YP_006295291.1 387126686 12846073 complement(810514..810816) 1 NC_017857.1 PFAM: MAPEG family; glutathione S-transferase-like protein 810816 12846073 Q7A_801 Methylophaga nitratireducenticrescens glutathione S-transferase-like protein YP_006295291.1 810514 R 754476 CDS YP_006295292.1 387126687 12846074 complement(810946..812694) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; permease 812694 12846074 Q7A_802 Methylophaga nitratireducenticrescens permease YP_006295292.1 810946 R 754476 CDS YP_006295293.1 387126688 12846075 complement(812763..812969) 1 NC_017857.1 PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD; NADH-dependent formate dehydrogenase delta subunit FdsD 812969 12846075 Q7A_803 Methylophaga nitratireducenticrescens NADH-dependent formate dehydrogenase delta subunit FdsD YP_006295293.1 812763 R 754476 CDS YP_006295294.1 387126689 12846158 complement(813023..813847) 1 NC_017857.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D 813847 12846158 Q7A_804 Methylophaga nitratireducenticrescens formate dehydrogenase subunit D YP_006295294.1 813023 R 754476 CDS YP_006295295.1 387126690 12846159 complement(813844..816723) 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase subunit alpha 816723 12846159 Q7A_805 Methylophaga nitratireducenticrescens NAD-dependent formate dehydrogenase subunit alpha YP_006295295.1 813844 R 754476 CDS YP_006295296.1 387126691 12846160 complement(816727..818274) 1 NC_017857.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NAD-dependent formate dehydrogenase subunit beta 818274 12846160 Q7A_806 Methylophaga nitratireducenticrescens NAD-dependent formate dehydrogenase subunit beta YP_006295296.1 816727 R 754476 CDS YP_006295297.1 387126692 12846161 complement(818274..818765) 1 NC_017857.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; NAD-dependent formate dehydrogenase gamma subunit 818765 12846161 Q7A_807 Methylophaga nitratireducenticrescens NAD-dependent formate dehydrogenase gamma subunit YP_006295297.1 818274 R 754476 CDS YP_006295298.1 387126693 12846162 complement(818961..820049) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdopterin binding domain-containing protein 820049 12846162 Q7A_808 Methylophaga nitratireducenticrescens molybdopterin binding domain-containing protein YP_006295298.1 818961 R 754476 CDS YP_006295299.1 387126694 12846163 complement(820106..820540) 1 NC_017857.1 PFAM: MoaE protein; molybdenum cofactor biosynthesis protein MoaE 820540 12846163 Q7A_809 Methylophaga nitratireducenticrescens molybdenum cofactor biosynthesis protein MoaE YP_006295299.1 820106 R 754476 CDS YP_006295300.1 387126695 12846164 complement(820543..820770) 1 NC_017857.1 PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 820770 12846164 Q7A_810 Methylophaga nitratireducenticrescens molybdopterin converting factor subunit 1 YP_006295300.1 820543 R 754476 CDS YP_006295301.1 387126696 12846165 820816..821295 1 NC_017857.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein MoaC 821295 12846165 Q7A_811 Methylophaga nitratireducenticrescens molybdenum cofactor biosynthesis protein MoaC YP_006295301.1 820816 D 754476 CDS YP_006295302.1 387126697 12846166 821439..822764 1 NC_017857.1 PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 822764 12846166 Q7A_812 Methylophaga nitratireducenticrescens phosphate-selective porin O and P YP_006295302.1 821439 D 754476 CDS YP_006295303.1 387126698 12846167 823061..824395 1 NC_017857.1 PFAM: Phosphate-selective porin O and P; phosphate-selective porin O and P 824395 12846167 Q7A_813 Methylophaga nitratireducenticrescens phosphate-selective porin O and P YP_006295303.1 823061 D 754476 CDS YP_006295304.1 387126699 12846168 complement(824479..825285) 1 NC_017857.1 ABC-type tungstate transport system, periplasmic binding protein 825285 12846168 Q7A_814 Methylophaga nitratireducenticrescens ABC-type tungstate transport system, periplasmic binding protein YP_006295304.1 824479 R 754476 CDS YP_006295305.1 387126700 12846169 complement(825406..826470) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2333); hypothetical protein 826470 12846169 Q7A_815 Methylophaga nitratireducenticrescens hypothetical protein YP_006295305.1 825406 R 754476 CDS YP_006295306.1 387126701 12846170 826734..827684 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 827684 12846170 Q7A_816 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006295306.1 826734 D 754476 CDS YP_006295307.1 387126702 12846171 827684..828424 1 NC_017857.1 gliding motility protein GldF 828424 12846171 Q7A_817 Methylophaga nitratireducenticrescens gliding motility protein GldF YP_006295307.1 827684 D 754476 CDS YP_006295308.1 387126703 12846172 828440..830353 1 NC_017857.1 PFAM: ABC-type uncharacterized transport system; gliding motility protein GldG 830353 12846172 Q7A_818 Methylophaga nitratireducenticrescens gliding motility protein GldG YP_006295308.1 828440 D 754476 CDS YP_006295309.1 387126704 12846173 830408..831520 1 NC_017857.1 hypothetical protein 831520 12846173 Q7A_819 Methylophaga nitratireducenticrescens hypothetical protein YP_006295309.1 830408 D 754476 CDS YP_006295310.1 387126705 12846174 complement(831591..832544) 1 NC_017857.1 PFAM: CheW-like domain; Response regulator receiver domain; chemotaxis protein CheV 832544 12846174 Q7A_820 Methylophaga nitratireducenticrescens chemotaxis protein CheV YP_006295310.1 831591 R 754476 CDS YP_006295311.1 387126706 12846175 832672..833376 1 NC_017857.1 PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagellar basal-body P-ring formation protein FlgA 833376 12846175 Q7A_821 Methylophaga nitratireducenticrescens flagellar basal-body P-ring formation protein FlgA YP_006295311.1 832672 D 754476 CDS YP_006295312.1 387126707 12846176 833463..833777 1 NC_017857.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; anti-sigma-28 factor FlgM 833777 12846176 Q7A_822 Methylophaga nitratireducenticrescens anti-sigma-28 factor FlgM YP_006295312.1 833463 D 754476 CDS YP_006295313.1 387126708 12846177 833793..834281 1 NC_017857.1 PFAM: FlgN protein; hypothetical protein 834281 12846177 Q7A_823 Methylophaga nitratireducenticrescens hypothetical protein YP_006295313.1 833793 D 754476 CDS YP_006295314.1 387126709 12846178 complement(834312..835325) 1 NC_017857.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; Ferrochelatase, protoheme ferro-lyase 835325 12846178 Q7A_824 Methylophaga nitratireducenticrescens Ferrochelatase, protoheme ferro-lyase YP_006295314.1 834312 R 754476 CDS YP_006295315.1 387126710 12846179 complement(835334..836248) 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; cell division inhibitor 836248 12846179 Q7A_825 Methylophaga nitratireducenticrescens cell division inhibitor YP_006295315.1 835334 R 754476 CDS YP_006295316.1 387126711 12846180 836360..837304 1 NC_017857.1 PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722); COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA; hypothetical protein 837304 12846180 Q7A_826 Methylophaga nitratireducenticrescens hypothetical protein YP_006295316.1 836360 D 754476 CDS YP_006295317.1 387126712 12846181 837483..838472 1 NC_017857.1 PFAM: Histone deacetylase domain; acetylspermidine deacetylase 838472 12846181 Q7A_827 Methylophaga nitratireducenticrescens acetylspermidine deacetylase YP_006295317.1 837483 D 754476 CDS YP_006295318.1 387126713 12846182 838581..839468 1 NC_017857.1 PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase 839468 12846182 Q7A_828 Methylophaga nitratireducenticrescens enoyl-CoA hydratase YP_006295318.1 838581 D 754476 CDS YP_006295319.1 387126714 12846183 complement(839674..842250) 1 NC_017857.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; regulator of pathogenicity factors 842250 12846183 Q7A_829 Methylophaga nitratireducenticrescens regulator of pathogenicity factors YP_006295319.1 839674 R 754476 CDS YP_006295320.1 387126715 12846184 complement(842240..843355) 1 NC_017857.1 PFAM: HD domain; Response regulator receiver domain; response regulator 843355 12846184 Q7A_830 Methylophaga nitratireducenticrescens response regulator YP_006295320.1 842240 R 754476 CDS YP_006295321.1 387126716 12846185 843673..844041 1 NC_017857.1 PFAM: CbiX; Sirohydrochlorin cobaltochelatase 844041 12846185 Q7A_831 Methylophaga nitratireducenticrescens Sirohydrochlorin cobaltochelatase YP_006295321.1 843673 D 754476 CDS YP_006295322.1 387126717 12846186 complement(844092..844310) 1 NC_017857.1 hypothetical protein 844310 12846186 Q7A_832 Methylophaga nitratireducenticrescens hypothetical protein YP_006295322.1 844092 R 754476 CDS YP_006295323.1 387126718 12846187 844999..845439 1 NC_017857.1 hypothetical protein 845439 12846187 Q7A_833 Methylophaga nitratireducenticrescens hypothetical protein YP_006295323.1 844999 D 754476 CDS YP_006295324.1 387126719 12846188 complement(845545..847218) 1 NC_017857.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 847218 12846188 Q7A_834 Methylophaga nitratireducenticrescens dihydroxy-acid dehydratase YP_006295324.1 845545 R 754476 CDS YP_006295325.1 387126720 12846189 847620..848627 1 NC_017857.1 PFAM: Fatty acid desaturase; beta-carotene ketolase 848627 12846189 Q7A_835 Methylophaga nitratireducenticrescens beta-carotene ketolase YP_006295325.1 847620 D 754476 CDS YP_006295326.1 387126721 12846192 851064..851786 1 NC_017857.1 hypothetical protein 851786 12846192 Q7A_839 Methylophaga nitratireducenticrescens hypothetical protein YP_006295326.1 851064 D 754476 CDS YP_006295327.1 387126722 12846193 851770..852627 1 NC_017857.1 PFAM: Protein kinase domain; serine/threonine protein kinase 852627 12846193 Q7A_840 Methylophaga nitratireducenticrescens serine/threonine protein kinase YP_006295327.1 851770 D 754476 CDS YP_006295328.1 387126723 12846194 852660..853820 1 NC_017857.1 hypothetical protein 853820 12846194 Q7A_841 Methylophaga nitratireducenticrescens hypothetical protein YP_006295328.1 852660 D 754476 CDS YP_006295329.1 387126724 12846195 complement(853831..854559) 1 NC_017857.1 PFAM: Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase PrpC 854559 12846195 Q7A_842 Methylophaga nitratireducenticrescens protein serine/threonine phosphatase PrpC YP_006295329.1 853831 R 754476 CDS YP_006295330.1 387126725 12846196 complement(855180..855809) 1 NC_017857.1 hypothetical protein 855809 12846196 Q7A_843 Methylophaga nitratireducenticrescens hypothetical protein YP_006295330.1 855180 R 754476 CDS YP_006295331.1 387126726 12846197 complement(855904..856650) 1 NC_017857.1 PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; DNA replication protein 856650 12846197 Q7A_844 Methylophaga nitratireducenticrescens DNA replication protein YP_006295331.1 855904 R 754476 CDS YP_006295332.1 387126727 12846198 complement(856628..858175) 1 NC_017857.1 PFAM: Integrase core domain; transposase 858175 12846198 Q7A_845 Methylophaga nitratireducenticrescens transposase YP_006295332.1 856628 R 754476 CDS YP_006295333.1 387126728 12846199 complement(858407..859291) 1 NC_017857.1 PFAM: Competence protein CoiA-like family; competence protein 859291 12846199 Q7A_846 Methylophaga nitratireducenticrescens competence protein YP_006295333.1 858407 R 754476 CDS YP_006295334.1 387126729 12846200 complement(859403..859894) 1 NC_017857.1 acetyltransferase 859894 12846200 Q7A_847 Methylophaga nitratireducenticrescens acetyltransferase YP_006295334.1 859403 R 754476 CDS YP_006295335.1 387126730 12846201 complement(859885..860013) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1778); hypothetical protein 860013 12846201 Q7A_848 Methylophaga nitratireducenticrescens hypothetical protein YP_006295335.1 859885 R 754476 CDS YP_006295336.1 387126731 12846202 complement(860538..860693) 1 NC_017857.1 hypothetical protein 860693 12846202 Q7A_849 Methylophaga nitratireducenticrescens hypothetical protein YP_006295336.1 860538 R 754476 CDS YP_006295337.1 387126732 12846203 complement(860866..861189) 1 NC_017857.1 PFAM: Uncharacterized conserved protein (DUF2149); hypothetical protein 861189 12846203 Q7A_850 Methylophaga nitratireducenticrescens hypothetical protein YP_006295337.1 860866 R 754476 CDS YP_006295338.1 387126733 12846204 complement(861186..861704) 1 NC_017857.1 transporter PduT for various metalloporphyrins 861704 12846204 Q7A_851 Methylophaga nitratireducenticrescens transporter PduT for various metalloporphyrins YP_006295338.1 861186 R 754476 CDS YP_006295339.1 387126734 12846205 complement(861706..865593) 1 NC_017857.1 PFAM: CobN/Magnesium Chelatase; CobN-like chelatase BtuS for metalloporphyrine salvage 865593 12846205 Q7A_852 Methylophaga nitratireducenticrescens CobN-like chelatase BtuS for metalloporphyrine salvage YP_006295339.1 861706 R 754476 CDS YP_006295340.1 387126735 12846206 complement(865648..867570) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 867570 12846206 Q7A_853 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006295340.1 865648 R 754476 CDS YP_006295341.1 387126736 12846207 complement(868270..868893) 1 NC_017857.1 PFAM: Protein of unknown function (DUF502); hypothetical protein 868893 12846207 Q7A_854 Methylophaga nitratireducenticrescens hypothetical protein YP_006295341.1 868270 R 754476 CDS YP_006295342.1 387126737 12846208 complement(868928..869392) 1 NC_017857.1 NADH dehydrogenase 869392 12846208 Q7A_855 Methylophaga nitratireducenticrescens NADH dehydrogenase YP_006295342.1 868928 R 754476 CDS YP_006295343.1 387126738 12846209 complement(869397..869630) 1 NC_017857.1 PFAM: SirA-like protein; Rhodanese-like domain-containing protein 869630 12846209 Q7A_856 Methylophaga nitratireducenticrescens Rhodanese-like domain-containing protein YP_006295343.1 869397 R 754476 CDS YP_006295344.1 387126739 12846210 869790..871175 1 NC_017857.1 PFAM: Peptidase family M48; peptidase M48 871175 12846210 Q7A_857 Methylophaga nitratireducenticrescens peptidase M48 YP_006295344.1 869790 D 754476 CDS YP_006295345.1 387126740 12846211 871172..871660 1 NC_017857.1 sulfur oxidation protein SoxY 871660 12846211 Q7A_858 Methylophaga nitratireducenticrescens sulfur oxidation protein SoxY YP_006295345.1 871172 D 754476 CDS YP_006295346.1 387126741 12846212 871660..871977 1 NC_017857.1 PFAM: Sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ 871977 12846212 Q7A_859 Methylophaga nitratireducenticrescens sulfur oxidation protein SoxZ YP_006295346.1 871660 D 754476 CDS YP_006295347.1 387126742 12846213 871974..873689 1 NC_017857.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; methanol utilization control sensor protein moxY 873689 12846213 Q7A_860 Methylophaga nitratireducenticrescens methanol utilization control sensor protein moxY YP_006295347.1 871974 D 754476 CDS YP_006295348.1 387126743 12846214 873679..874323 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 874323 12846214 Q7A_861 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006295348.1 873679 D 754476 CDS YP_006295349.1 387126744 12846215 874685..875875 1 NC_017857.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region 875875 12846215 Q7A_862 Methylophaga nitratireducenticrescens ATP-binding region, ATPase-like:Histidine kinase, dimerization and phosphoacceptor region YP_006295349.1 874685 D 754476 CDS YP_006295350.1 387126745 12846216 875865..876509 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA-binding response regulator 876509 12846216 Q7A_863 Methylophaga nitratireducenticrescens DNA-binding response regulator YP_006295350.1 875865 D 754476 CDS YP_006295351.1 387126746 12846217 876697..878475 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 878475 12846217 Q7A_864 Methylophaga nitratireducenticrescens methanol dehydrogenase large subunit protein YP_006295351.1 876697 D 754476 CDS YP_006295352.1 387126747 12846218 878974..879888 1 NC_017857.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; coenzyme PQQ synthesis protein B 879888 12846218 Q7A_865 Methylophaga nitratireducenticrescens coenzyme PQQ synthesis protein B YP_006295352.1 878974 D 754476 CDS YP_006295353.1 387126748 12846219 879911..880639 1 NC_017857.1 PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C; Coenzyme PQQ synthesis protein C 880639 12846219 Q7A_866 Methylophaga nitratireducenticrescens Coenzyme PQQ synthesis protein C YP_006295353.1 879911 D 754476 CDS YP_006295354.1 387126749 12846384 880636..880920 1 NC_017857.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD; coenzyme PQQ synthesis protein D 880920 12846384 Q7A_867 Methylophaga nitratireducenticrescens coenzyme PQQ synthesis protein D YP_006295354.1 880636 D 754476 CDS YP_006295355.1 387126750 12846385 880892..882085 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain; coenzyme PQQ synthesis protein E 882085 12846385 Q7A_868 Methylophaga nitratireducenticrescens coenzyme PQQ synthesis protein E YP_006295355.1 880892 D 754476 CDS YP_006295356.1 387126751 12846386 882075..883007 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 883007 12846386 Q7A_869 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006295356.1 882075 D 754476 CDS YP_006295357.1 387126752 12846387 883004..883789 1 NC_017857.1 PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein; ABC transporter permease 883789 12846387 Q7A_870 Methylophaga nitratireducenticrescens ABC transporter permease YP_006295357.1 883004 D 754476 CDS YP_006295358.1 387126753 12846388 883819..884634 1 NC_017857.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 884634 12846388 Q7A_871 Methylophaga nitratireducenticrescens protein-L-isoaspartate O-methyltransferase YP_006295358.1 883819 D 754476 CDS YP_006295359.1 387126754 12846389 884650..884976 1 NC_017857.1 PFAM: Rhodanese-like domain; Rhodanese-related sulfurtransferase 884976 12846389 Q7A_872 Methylophaga nitratireducenticrescens Rhodanese-related sulfurtransferase YP_006295359.1 884650 D 754476 CDS YP_006295360.1 387126755 12846390 884986..886302 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC precursor 886302 12846390 Q7A_873 Methylophaga nitratireducenticrescens type I secretion outer membrane protein, TolC precursor YP_006295360.1 884986 D 754476 CDS YP_006295361.1 387126756 12846391 886324..886875 1 NC_017857.1 PFAM: Isochorismatase family; isochorismatase 886875 12846391 Q7A_874 Methylophaga nitratireducenticrescens isochorismatase YP_006295361.1 886324 D 754476 CDS YP_006295362.1 387126757 12846392 complement(886872..887072) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1289); Fe-S-like protein 887072 12846392 Q7A_875 Methylophaga nitratireducenticrescens Fe-S-like protein YP_006295362.1 886872 R 754476 CDS YP_006295363.1 387126758 12846393 complement(887448..888959) 1 NC_017857.1 PFAM: Radical SAM superfamily; B12 binding domain; Mg-protoporphyrin IX monomethyl ester oxidative cyclase 888959 12846393 Q7A_876 Methylophaga nitratireducenticrescens Mg-protoporphyrin IX monomethyl ester oxidative cyclase YP_006295363.1 887448 R 754476 CDS YP_006295364.1 387126759 12846394 complement(888996..890438) 1 NC_017857.1 PFAM: Exonuclease; Exonuclease C-terminal; Exodeoxyribonuclease I 890438 12846394 Q7A_877 Methylophaga nitratireducenticrescens Exodeoxyribonuclease I YP_006295364.1 888996 R 754476 CDS YP_006295365.1 387126760 12846395 complement(890439..891725) 1 NC_017857.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde aminotransferase 891725 12846395 Q7A_878 Methylophaga nitratireducenticrescens glutamate-1-semialdehyde aminotransferase YP_006295365.1 890439 R 754476 CDS YP_006295366.1 387126761 12846396 891872..893209 1 NC_017857.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; periplasmic Sensor signal transduction Histidine Kinase 893209 12846396 Q7A_879 Methylophaga nitratireducenticrescens periplasmic Sensor signal transduction Histidine Kinase YP_006295366.1 891872 D 754476 CDS YP_006295367.1 387126762 12846397 893206..893841 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 893841 12846397 Q7A_880 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006295367.1 893206 D 754476 CDS YP_006295368.1 387126763 12846398 894175..894942 1 NC_017857.1 PFAM: Protein of unknown function (DUF3450); hypothetical protein 894942 12846398 Q7A_881 Methylophaga nitratireducenticrescens hypothetical protein YP_006295368.1 894175 D 754476 CDS YP_006295369.1 387126764 12846399 894939..896300 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 896300 12846399 Q7A_882 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006295369.1 894939 D 754476 CDS YP_006295370.1 387126765 12846400 896323..896805 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB 896805 12846400 Q7A_883 Methylophaga nitratireducenticrescens Ferric siderophore transport system, biopolymer transport protein ExbB YP_006295370.1 896323 D 754476 CDS YP_006295371.1 387126766 12846401 896814..897221 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 897221 12846401 Q7A_884 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006295371.1 896814 D 754476 CDS YP_006295372.1 387126767 12846402 897241..897900 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 897900 12846402 Q7A_885 Methylophaga nitratireducenticrescens Ferric siderophore transport system, periplasmic binding protein TonB YP_006295372.1 897241 D 754476 CDS YP_006295373.1 387126768 12846403 897903..899126 1 NC_017857.1 TPR domain-containing protein 899126 12846403 Q7A_886 Methylophaga nitratireducenticrescens TPR domain-containing protein YP_006295373.1 897903 D 754476 CDS YP_006295374.1 387126769 12846404 899119..899685 1 NC_017857.1 PFAM: Class II Aldolase and Adducin N-terminal domain; ribulose-5-phosphate 4-epimerase-related epimerase/aldolase 899685 12846404 Q7A_887 Methylophaga nitratireducenticrescens ribulose-5-phosphate 4-epimerase-related epimerase/aldolase YP_006295374.1 899119 D 754476 CDS YP_006295375.1 387126770 12846405 900029..902176 1 NC_017857.1 PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein 902176 12846405 Q7A_888 Methylophaga nitratireducenticrescens hypothetical protein YP_006295375.1 900029 D 754476 CDS YP_006295376.1 387126771 12846406 902163..903335 1 NC_017857.1 PFAM: Aminotransferase class I and II; class I and II aminotransferase 903335 12846406 Q7A_889 Methylophaga nitratireducenticrescens class I and II aminotransferase YP_006295376.1 902163 D 754476 CDS YP_006295377.1 387126772 12846407 903427..903630 1 NC_017857.1 PFAM: Protein of unknown function (DUF2582); hypothetical protein 903630 12846407 Q7A_890 Methylophaga nitratireducenticrescens hypothetical protein YP_006295377.1 903427 D 754476 CDS YP_006295378.1 387126773 12846408 complement(903627..904199) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3365); cytochrome c-like protein 904199 12846408 Q7A_891 Methylophaga nitratireducenticrescens cytochrome c-like protein YP_006295378.1 903627 R 754476 CDS YP_006295379.1 387126774 12846409 904508..906406 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; Topoisomerase IV subunit B 906406 12846409 Q7A_892 Methylophaga nitratireducenticrescens Topoisomerase IV subunit B YP_006295379.1 904508 D 754476 CDS YP_006295380.1 387126775 12846410 906421..908661 1 NC_017857.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial; Topoisomerase IV subunit A 908661 12846410 Q7A_893 Methylophaga nitratireducenticrescens Topoisomerase IV subunit A YP_006295380.1 906421 D 754476 CDS YP_006295381.1 387126776 12846411 908715..909176 1 NC_017857.1 PFAM: Protein of unknown function (DUF3305); hypothetical protein 909176 12846411 Q7A_894 Methylophaga nitratireducenticrescens hypothetical protein YP_006295381.1 908715 D 754476 CDS YP_006295382.1 387126777 12846412 909176..909637 1 NC_017857.1 PFAM: Protein of unknown function (DUF3306); hypothetical protein 909637 12846412 Q7A_895 Methylophaga nitratireducenticrescens hypothetical protein YP_006295382.1 909176 D 754476 CDS YP_006295383.1 387126778 12846413 909630..911174 1 NC_017857.1 PFAM: 4Fe-4S binding domain; Iron-sulfur cluster-binding protein 911174 12846413 Q7A_896 Methylophaga nitratireducenticrescens Iron-sulfur cluster-binding protein YP_006295383.1 909630 D 754476 CDS YP_006295384.1 387126779 12846414 911180..911755 1 NC_017857.1 PFAM: Nitrate reductase delta subunit; formate dehydrogenase-specific chaperone 911755 12846414 Q7A_897 Methylophaga nitratireducenticrescens formate dehydrogenase-specific chaperone YP_006295384.1 911180 D 754476 CDS YP_006295385.1 387126780 12846415 912111..914984 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; formate dehydrogenase-O, major subunit 914984 12846415 Q7A_898 Methylophaga nitratireducenticrescens formate dehydrogenase-O, major subunit YP_006295385.1 912111 D 754476 CDS YP_006295386.1 387126781 12846416 915001..915585 1 NC_017857.1 formate dehydrogenase iron-sulfur subunit 915585 12846416 Q7A_899 Methylophaga nitratireducenticrescens formate dehydrogenase iron-sulfur subunit YP_006295386.1 915001 D 754476 CDS YP_006295387.1 387126782 12846417 915588..915767 1 NC_017857.1 hypothetical protein 915767 12846417 Q7A_900 Methylophaga nitratireducenticrescens hypothetical protein YP_006295387.1 915588 D 754476 CDS YP_006295388.1 387126783 12846418 915778..916785 1 NC_017857.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase O subunit gamma 916785 12846418 Q7A_901 Methylophaga nitratireducenticrescens formate dehydrogenase O subunit gamma YP_006295388.1 915778 D 754476 CDS YP_006295389.1 387126784 12846419 917110..918807 1 NC_017857.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; tungsten-containing formate dehydrogenase subunit beta 918807 12846419 Q7A_902 Methylophaga nitratireducenticrescens tungsten-containing formate dehydrogenase subunit beta YP_006295389.1 917110 D 754476 CDS YP_006295390.1 387126785 12846420 918807..921608 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; tungsten-containing formate dehydrogenase alpha subunit 921608 12846420 Q7A_903 Methylophaga nitratireducenticrescens tungsten-containing formate dehydrogenase alpha subunit YP_006295390.1 918807 D 754476 CDS YP_006295391.1 387126786 12846421 921805..922524 1 NC_017857.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase 922524 12846421 Q7A_904 Methylophaga nitratireducenticrescens 5'-nucleotidase YP_006295391.1 921805 D 754476 CDS YP_006295392.1 387126787 12846422 922521..923183 1 NC_017857.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 923183 12846422 Q7A_905 Methylophaga nitratireducenticrescens protein-L-isoaspartate O-methyltransferase YP_006295392.1 922521 D 754476 CDS YP_006295393.1 387126788 12846423 923180..923755 1 NC_017857.1 PFAM: SNARE associated Golgi protein; lipoprotein B 923755 12846423 Q7A_906 Methylophaga nitratireducenticrescens lipoprotein B YP_006295393.1 923180 D 754476 CDS YP_006295394.1 387126789 12846424 complement(923994..924146) 1 NC_017857.1 hypothetical protein 924146 12846424 Q7A_907 Methylophaga nitratireducenticrescens hypothetical protein YP_006295394.1 923994 R 754476 CDS YP_006295395.1 387126790 12846425 924160..924588 1 NC_017857.1 PFAM: Peptidase family M23; lipoprotein NlpD 924588 12846425 Q7A_908 Methylophaga nitratireducenticrescens lipoprotein NlpD YP_006295395.1 924160 D 754476 CDS YP_006295396.1 387126791 12846426 924698..925753 1 NC_017857.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 925753 12846426 Q7A_909 Methylophaga nitratireducenticrescens peptide chain release factor 2 YP_006295396.1 924698 D 754476 CDS YP_006295397.1 387126792 12846427 925765..927264 1 NC_017857.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase 927264 12846427 Q7A_910 Methylophaga nitratireducenticrescens lysyl-tRNA synthetase YP_006295397.1 925765 D 754476 CDS YP_006295398.1 387126793 12846428 complement(927274..928239) 1 NC_017857.1 PFAM: Phage integrase family; TIGRFAM: integron integrase; integron integrase IntI4 928239 12846428 Q7A_911 Methylophaga nitratireducenticrescens integron integrase IntI4 YP_006295398.1 927274 R 754476 CDS YP_006295399.1 387126794 12846429 928983..929933 1 NC_017857.1 hypothetical protein 929933 12846429 Q7A_912 Methylophaga nitratireducenticrescens hypothetical protein YP_006295399.1 928983 D 754476 CDS YP_006295400.1 387126795 12846430 930027..930572 1 NC_017857.1 hypothetical protein 930572 12846430 Q7A_913 Methylophaga nitratireducenticrescens hypothetical protein YP_006295400.1 930027 D 754476 CDS YP_006295401.1 387126796 12846431 930683..931255 1 NC_017857.1 hypothetical protein 931255 12846431 Q7A_914 Methylophaga nitratireducenticrescens hypothetical protein YP_006295401.1 930683 D 754476 CDS YP_006295402.1 387126797 12846432 932347..933099 1 NC_017857.1 hypothetical protein 933099 12846432 Q7A_915 Methylophaga nitratireducenticrescens hypothetical protein YP_006295402.1 932347 D 754476 CDS YP_006295403.1 387126798 12846433 933332..933484 1 NC_017857.1 hypothetical protein 933484 12846433 Q7A_916 Methylophaga nitratireducenticrescens hypothetical protein YP_006295403.1 933332 D 754476 CDS YP_006295404.1 387126799 12846434 933607..934518 1 NC_017857.1 leucyl-tRNA synthetase 934518 12846434 Q7A_917 Methylophaga nitratireducenticrescens leucyl-tRNA synthetase YP_006295404.1 933607 D 754476 CDS YP_006295405.1 387126800 12846435 934659..934892 1 NC_017857.1 hypothetical protein 934892 12846435 Q7A_918 Methylophaga nitratireducenticrescens hypothetical protein YP_006295405.1 934659 D 754476 CDS YP_006295406.1 387126801 12846436 935462..935800 1 NC_017857.1 PFAM: Thioredoxin; thioredoxin-like protein 935800 12846436 Q7A_919 Methylophaga nitratireducenticrescens thioredoxin-like protein YP_006295406.1 935462 D 754476 CDS YP_006295407.1 387126802 12846437 936122..936247 1 NC_017857.1 hypothetical protein 936247 12846437 Q7A_920 Methylophaga nitratireducenticrescens hypothetical protein YP_006295407.1 936122 D 754476 CDS YP_006295408.1 387126803 12846438 936240..936527 1 NC_017857.1 PFAM: Helix-turn-helix; DNA-binding protein 936527 12846438 Q7A_921 Methylophaga nitratireducenticrescens DNA-binding protein YP_006295408.1 936240 D 754476 CDS YP_006295409.1 387126804 12846439 complement(936569..937414) 1 NC_017857.1 PFAM: ATP dependent DNA ligase domain; DNA ligase (ATP) 937414 12846439 Q7A_922 Methylophaga nitratireducenticrescens DNA ligase (ATP) YP_006295409.1 936569 R 754476 CDS YP_006295410.1 387126805 12846440 937817..938155 1 NC_017857.1 PFAM: Thioredoxin; thioredoxin-like protein 938155 12846440 Q7A_923 Methylophaga nitratireducenticrescens thioredoxin-like protein YP_006295410.1 937817 D 754476 CDS YP_006295411.1 387126806 12846441 complement(938217..938471) 1 NC_017857.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; YoeB toxin protein 938471 12846441 Q7A_924 Methylophaga nitratireducenticrescens YoeB toxin protein YP_006295411.1 938217 R 754476 CDS YP_006295412.1 387126807 12846442 complement(938468..938719) 1 NC_017857.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; YefM protein (antitoxin to YoeB) 938719 12846442 Q7A_925 Methylophaga nitratireducenticrescens YefM protein (antitoxin to YoeB) YP_006295412.1 938468 R 754476 CDS YP_006295413.1 387126808 12846443 939127..940974 1 NC_017857.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 940974 12846443 Q7A_926 Methylophaga nitratireducenticrescens lytic murein transglycosylase YP_006295413.1 939127 D 754476 CDS YP_006295414.1 387126809 12846444 complement(941216..942346) 1 NC_017857.1 iron-regulated membrane protein 942346 12846444 Q7A_927 Methylophaga nitratireducenticrescens iron-regulated membrane protein YP_006295414.1 941216 R 754476 CDS YP_006295415.1 387126810 12846445 complement(942346..944418) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Ferric vulnibactin receptor VuuA 944418 12846445 Q7A_928 Methylophaga nitratireducenticrescens Ferric vulnibactin receptor VuuA YP_006295415.1 942346 R 754476 CDS YP_006295416.1 387126811 12846446 944585..945460 1 NC_017857.1 transcriptional regulator 945460 12846446 Q7A_929 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295416.1 944585 D 754476 CDS YP_006295417.1 387126812 12846447 945639..946181 1 NC_017857.1 transposase 946181 12846447 Q7A_930 Methylophaga nitratireducenticrescens transposase YP_006295417.1 945639 D 754476 CDS YP_006295418.1 387126813 12846448 946178..946471 1 NC_017857.1 PFAM: Transposase DDE domain; IS4 family transposase 946471 12846448 Q7A_931 Methylophaga nitratireducenticrescens IS4 family transposase YP_006295418.1 946178 D 754476 CDS YP_006295419.1 387126814 12846449 946847..946990 1 NC_017857.1 hypothetical protein 946990 12846449 Q7A_932 Methylophaga nitratireducenticrescens hypothetical protein YP_006295419.1 946847 D 754476 CDS YP_006295420.1 387126815 12846450 947090..947641 1 NC_017857.1 hypothetical protein 947641 12846450 Q7A_933 Methylophaga nitratireducenticrescens hypothetical protein YP_006295420.1 947090 D 754476 CDS YP_006295421.1 387126816 12846451 947668..948312 1 NC_017857.1 PFAM: Methyltransferase domain; SAM-dependent methyltransferase 948312 12846451 Q7A_934 Methylophaga nitratireducenticrescens SAM-dependent methyltransferase YP_006295421.1 947668 D 754476 CDS YP_006295422.1 387126817 12846452 948429..948701 1 NC_017857.1 PFAM: Ribbon-helix-helix protein, copG family; transcriptional regulator 948701 12846452 Q7A_935 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295422.1 948429 D 754476 CDS YP_006295423.1 387126818 12846453 948743..948979 1 NC_017857.1 PFAM: Plasmid stabilisation system protein; plasmid stabilization system protein 948979 12846453 Q7A_936 Methylophaga nitratireducenticrescens plasmid stabilization system protein YP_006295423.1 948743 D 754476 CDS YP_006295424.1 387126819 12846454 complement(949012..949125) 1 NC_017857.1 hypothetical protein 949125 12846454 Q7A_937 Methylophaga nitratireducenticrescens hypothetical protein YP_006295424.1 949012 R 754476 CDS YP_006295425.1 387126820 12846455 complement(949308..949595) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3144); hypothetical protein 949595 12846455 Q7A_938 Methylophaga nitratireducenticrescens hypothetical protein YP_006295425.1 949308 R 754476 CDS YP_006295426.1 387126821 12846456 949749..950090 1 NC_017857.1 hypothetical protein 950090 12846456 Q7A_939 Methylophaga nitratireducenticrescens hypothetical protein YP_006295426.1 949749 D 754476 CDS YP_006295427.1 387126822 12846457 complement(950133..952457) 1 NC_017857.1 spermidine synthase 952457 12846457 Q7A_940 Methylophaga nitratireducenticrescens spermidine synthase YP_006295427.1 950133 R 754476 CDS YP_006295428.1 387126823 12846458 complement(952577..953332) 1 NC_017857.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 953332 12846458 Q7A_941 Methylophaga nitratireducenticrescens protein-L-isoaspartate O-methyltransferase YP_006295428.1 952577 R 754476 CDS YP_006295429.1 387126824 12846459 953707..954579 1 NC_017857.1 PFAM: RIO1 family; serine/threonine protein kinase 954579 12846459 Q7A_942 Methylophaga nitratireducenticrescens serine/threonine protein kinase YP_006295429.1 953707 D 754476 CDS YP_006295430.1 387126825 12846460 complement(954866..955954) 1 NC_017857.1 PFAM: Endonuclease/Exonuclease/phosphatase family; hypothetical protein 955954 12846460 Q7A_943 Methylophaga nitratireducenticrescens hypothetical protein YP_006295430.1 954866 R 754476 CDS YP_006295431.1 387126826 12846461 956044..956172 1 NC_017857.1 hypothetical protein 956172 12846461 Q7A_944 Methylophaga nitratireducenticrescens hypothetical protein YP_006295431.1 956044 D 754476 CDS YP_006295432.1 387126827 12846462 956564..958459 1 NC_017857.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; signal-transduction protein 958459 12846462 Q7A_945 Methylophaga nitratireducenticrescens signal-transduction protein YP_006295432.1 956564 D 754476 CDS YP_006295433.1 387126828 12846463 958463..959185 1 NC_017857.1 PFAM: Exonuclease; DNA polymerase III subunit epsilon 959185 12846463 Q7A_946 Methylophaga nitratireducenticrescens DNA polymerase III subunit epsilon YP_006295433.1 958463 D 754476 CDS YP_006295434.1 387126829 12846464 complement(959196..960848) 1 NC_017857.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; High-affinity choline uptake protein BetT 960848 12846464 Q7A_947 Methylophaga nitratireducenticrescens High-affinity choline uptake protein BetT YP_006295434.1 959196 R 754476 CDS YP_006295435.1 387126830 12846465 complement(960946..962226) 1 NC_017857.1 hypothetical protein 962226 12846465 Q7A_948 Methylophaga nitratireducenticrescens hypothetical protein YP_006295435.1 960946 R 754476 CDS YP_006295436.1 387126831 12846466 962766..963179 1 NC_017857.1 PFAM: Universal stress protein family; universal stress protein UspA-like protein 963179 12846466 Q7A_949 Methylophaga nitratireducenticrescens universal stress protein UspA-like protein YP_006295436.1 962766 D 754476 CDS YP_006295437.1 387126832 12846549 complement(963343..963465) 1 NC_017857.1 hypothetical protein 963465 12846549 Q7A_950 Methylophaga nitratireducenticrescens hypothetical protein YP_006295437.1 963343 R 754476 CDS YP_006295438.1 387126833 12846550 complement(963702..964616) 1 NC_017857.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; phytoene synthase 964616 12846550 Q7A_951 Methylophaga nitratireducenticrescens phytoene synthase YP_006295438.1 963702 R 754476 CDS YP_006295439.1 387126834 12846551 complement(964606..965892) 1 NC_017857.1 PFAM: RmuC family; DNA recombination protein RmuC 965892 12846551 Q7A_952 Methylophaga nitratireducenticrescens DNA recombination protein RmuC YP_006295439.1 964606 R 754476 CDS YP_006295440.1 387126835 12846552 complement(965883..966542) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase 966542 12846552 Q7A_953 Methylophaga nitratireducenticrescens phosphoglycolate phosphatase YP_006295440.1 965883 R 754476 CDS YP_006295441.1 387126836 12846553 complement(966542..967243) 1 NC_017857.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 967243 12846553 Q7A_954 Methylophaga nitratireducenticrescens 3-demethylubiquinone-9 3-methyltransferase YP_006295441.1 966542 R 754476 CDS YP_006295442.1 387126837 12846554 complement(967240..968559) 1 NC_017857.1 PFAM: Amidohydrolase family; S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase 968559 12846554 Q7A_955 Methylophaga nitratireducenticrescens S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase YP_006295442.1 967240 R 754476 CDS YP_006295443.1 387126838 12846555 968597..969649 1 NC_017857.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; Methylthioribose-1-phosphate isomerase 969649 12846555 Q7A_956 Methylophaga nitratireducenticrescens Methylthioribose-1-phosphate isomerase YP_006295443.1 968597 D 754476 CDS YP_006295444.1 387126839 12846556 969660..970334 1 NC_017857.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase 970334 12846556 Q7A_957 Methylophaga nitratireducenticrescens short-chain dehydrogenase YP_006295444.1 969660 D 754476 CDS YP_006295445.1 387126840 12846557 970328..971221 1 NC_017857.1 PFAM: Phosphotransferase enzyme family; phosphotransferase family protein 971221 12846557 Q7A_958 Methylophaga nitratireducenticrescens phosphotransferase family protein YP_006295445.1 970328 D 754476 CDS YP_006295446.1 387126841 12846558 complement(971218..971841) 1 NC_017857.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PnuC-like transporter linked to Choline/ethanolamine kinase and OMR 971841 12846558 Q7A_959 Methylophaga nitratireducenticrescens PnuC-like transporter linked to Choline/ethanolamine kinase and OMR YP_006295446.1 971218 R 754476 CDS YP_006295447.1 387126842 12846559 complement(971841..972098) 1 NC_017857.1 PFAM: YKOF-related Family; YKOF-like protein 972098 12846559 Q7A_960 Methylophaga nitratireducenticrescens YKOF-like protein YP_006295447.1 971841 R 754476 CDS YP_006295448.1 387126843 12846560 complement(972120..974186) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 974186 12846560 Q7A_961 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006295448.1 972120 R 754476 CDS YP_006295449.1 387126844 12846561 complement(974465..975034) 1 NC_017857.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; polyketide cyclase/dehydrase and lipid transport 975034 12846561 Q7A_962 Methylophaga nitratireducenticrescens polyketide cyclase/dehydrase and lipid transport YP_006295449.1 974465 R 754476 CDS YP_006295450.1 387126845 12846562 complement(975122..976042) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; cys regulon transcriptional activator CysB 976042 12846562 Q7A_963 Methylophaga nitratireducenticrescens cys regulon transcriptional activator CysB YP_006295450.1 975122 R 754476 CDS YP_006295451.1 387126846 12846563 complement(976124..976474) 1 NC_017857.1 hypothetical protein 976474 12846563 Q7A_964 Methylophaga nitratireducenticrescens hypothetical protein YP_006295451.1 976124 R 754476 CDS YP_006295452.1 387126847 12846564 976728..977528 1 NC_017857.1 PFAM: Sulfite exporter TauE/SafE; sulfate permease 977528 12846564 Q7A_965 Methylophaga nitratireducenticrescens sulfate permease YP_006295452.1 976728 D 754476 CDS YP_006295453.1 387126848 12846565 977559..978257 1 NC_017857.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenylyl-sulfate reductase (thioredoxin) / Adenylyl-sulfate reductase (thioredoxin) 978257 12846565 Q7A_966 Methylophaga nitratireducenticrescens phosphoadenylyl-sulfate reductase (thioredoxin) / Adenylyl-sulfate reductase (thioredoxin) YP_006295453.1 977559 D 754476 CDS YP_006295454.1 387126849 12846566 978270..979172 1 NC_017857.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; sulfate adenylyltransferase 979172 12846566 Q7A_967 Methylophaga nitratireducenticrescens sulfate adenylyltransferase YP_006295454.1 978270 D 754476 CDS YP_006295455.1 387126850 12846567 979287..980717 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase 980717 12846567 Q7A_968 Methylophaga nitratireducenticrescens sulfate adenylyltransferase YP_006295455.1 979287 D 754476 CDS YP_006295456.1 387126851 12846568 980796..980912 1 NC_017857.1 hypothetical protein 980912 12846568 Q7A_969 Methylophaga nitratireducenticrescens hypothetical protein YP_006295456.1 980796 D 754476 CDS YP_006295457.1 387126852 12846569 980994..981764 1 NC_017857.1 PFAM: EAL domain; hypothetical protein 981764 12846569 Q7A_970 Methylophaga nitratireducenticrescens hypothetical protein YP_006295457.1 980994 D 754476 CDS YP_006295458.1 387126853 12846570 complement(981744..982298) 1 NC_017857.1 PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific uracil/thymine DNA-glycosylase 982298 12846570 Q7A_971 Methylophaga nitratireducenticrescens G:T/U mismatch-specific uracil/thymine DNA-glycosylase YP_006295458.1 981744 R 754476 CDS YP_006295459.1 387126854 12846571 complement(982303..982746) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3465); hypothetical protein 982746 12846571 Q7A_972 Methylophaga nitratireducenticrescens hypothetical protein YP_006295459.1 982303 R 754476 CDS YP_006295460.1 387126855 12846572 complement(983100..983258) 1 NC_017857.1 hypothetical protein 983258 12846572 Q7A_973 Methylophaga nitratireducenticrescens hypothetical protein YP_006295460.1 983100 R 754476 CDS YP_006295461.1 387126856 12846573 983491..985149 1 NC_017857.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; sulfite reductase (NADPH) hemoprotein beta-component 985149 12846573 Q7A_974 Methylophaga nitratireducenticrescens sulfite reductase (NADPH) hemoprotein beta-component YP_006295461.1 983491 D 754476 CDS YP_006295462.1 387126857 12846574 985133..985615 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF934); Oxidoreductase 985615 12846574 Q7A_975 Methylophaga nitratireducenticrescens Oxidoreductase YP_006295462.1 985133 D 754476 CDS YP_006295463.1 387126858 12846575 985628..986503 1 NC_017857.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); bis(5'-nucleosyl)-tetraphosphatase 986503 12846575 Q7A_976 Methylophaga nitratireducenticrescens bis(5'-nucleosyl)-tetraphosphatase YP_006295463.1 985628 D 754476 CDS YP_006295464.1 387126859 12846576 986573..987055 1 NC_017857.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 987055 12846576 Q7A_977 Methylophaga nitratireducenticrescens 6,7-dimethyl-8-ribityllumazine synthase YP_006295464.1 986573 D 754476 CDS YP_006295465.1 387126860 12846577 987056..987517 1 NC_017857.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription termination protein NusB 987517 12846577 Q7A_978 Methylophaga nitratireducenticrescens transcription termination protein NusB YP_006295465.1 987056 D 754476 CDS YP_006295466.1 387126861 12846578 987565..988539 1 NC_017857.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase 988539 12846578 Q7A_979 Methylophaga nitratireducenticrescens thiamine-monophosphate kinase YP_006295466.1 987565 D 754476 CDS YP_006295467.1 387126862 12846579 988523..989011 1 NC_017857.1 PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 989011 12846579 Q7A_980 Methylophaga nitratireducenticrescens phosphatidylglycerophosphatase A YP_006295467.1 988523 D 754476 CDS YP_006295468.1 387126863 12846580 complement(989053..989988) 1 NC_017857.1 PFAM: pfkB family carbohydrate kinase; sugar kinase 989988 12846580 Q7A_981 Methylophaga nitratireducenticrescens sugar kinase YP_006295468.1 989053 R 754476 CDS YP_006295469.1 387126864 12846581 complement(989993..991141) 1 NC_017857.1 PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D; ribonuclease D 991141 12846581 Q7A_982 Methylophaga nitratireducenticrescens ribonuclease D YP_006295469.1 989993 R 754476 CDS YP_006295470.1 387126865 12846582 complement(991178..992068) 1 NC_017857.1 hydrolase 992068 12846582 Q7A_983 Methylophaga nitratireducenticrescens hydrolase YP_006295470.1 991178 R 754476 CDS YP_006295471.1 387126866 12846583 complement(992122..992373) 1 NC_017857.1 PFAM: Glutaredoxin-like domain (DUF836); glutaredoxin-like protein 992373 12846583 Q7A_984 Methylophaga nitratireducenticrescens glutaredoxin-like protein YP_006295471.1 992122 R 754476 CDS YP_006295472.1 387126867 12846584 complement(992370..992885) 1 NC_017857.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein MoaB 992885 12846584 Q7A_985 Methylophaga nitratireducenticrescens molybdenum cofactor biosynthesis protein MoaB YP_006295472.1 992370 R 754476 CDS YP_006295473.1 387126868 12846585 992981..993661 1 NC_017857.1 PFAM: Rickettsia 17 kDa surface antigen; OmpA family; outer membrane protein A precursor 993661 12846585 Q7A_986 Methylophaga nitratireducenticrescens outer membrane protein A precursor YP_006295473.1 992981 D 754476 CDS YP_006295474.1 387126869 12846586 993699..994427 1 NC_017857.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB 994427 12846586 Q7A_987 Methylophaga nitratireducenticrescens 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB YP_006295474.1 993699 D 754476 CDS YP_006295475.1 387126870 12846587 994531..994875 1 NC_017857.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 994875 12846587 Q7A_988 Methylophaga nitratireducenticrescens 30S ribosomal protein S6 YP_006295475.1 994531 D 754476 CDS YP_006295476.1 387126871 12846588 994891..995118 1 NC_017857.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 995118 12846588 Q7A_989 Methylophaga nitratireducenticrescens 30S ribosomal protein S18 YP_006295476.1 994891 D 754476 CDS YP_006295477.1 387126872 12846589 995156..996064 1 NC_017857.1 hypothetical protein 996064 12846589 Q7A_990 Methylophaga nitratireducenticrescens hypothetical protein YP_006295477.1 995156 D 754476 CDS YP_006295478.1 387126873 12846590 996113..996658 1 NC_017857.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 996658 12846590 Q7A_991 Methylophaga nitratireducenticrescens 50S ribosomal protein L9 YP_006295478.1 996113 D 754476 CDS YP_006295479.1 387126874 12846591 996764..998176 1 NC_017857.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase; replicative DNA helicase 998176 12846591 Q7A_992 Methylophaga nitratireducenticrescens replicative DNA helicase YP_006295479.1 996764 D 754476 CDS YP_006295480.1 387126875 12846592 998173..999261 1 NC_017857.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 999261 12846592 Q7A_993 Methylophaga nitratireducenticrescens alanine racemase YP_006295480.1 998173 D 754476 CDS YP_006295481.1 387126876 12846593 999254..1000642 1 NC_017857.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 1000642 12846593 Q7A_994 Methylophaga nitratireducenticrescens DNA repair protein RadA YP_006295481.1 999254 D 754476 CDS YP_006295482.1 387126877 12846594 complement(1000653..1001030) 1 NC_017857.1 PFAM: PilZ domain; type IV pilus assembly PilZ 1001030 12846594 Q7A_995 Methylophaga nitratireducenticrescens type IV pilus assembly PilZ YP_006295482.1 1000653 R 754476 CDS YP_006295483.1 387126878 12846595 1001093..1001518 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; hypothetical protein 1001518 12846595 Q7A_996 Methylophaga nitratireducenticrescens hypothetical protein YP_006295483.1 1001093 D 754476 CDS YP_006295484.1 387126879 12846596 complement(1001556..1002128) 1 NC_017857.1 PFAM: Putative phospholipid-binding domain; hemolysin 1002128 12846596 Q7A_997 Methylophaga nitratireducenticrescens hemolysin YP_006295484.1 1001556 R 754476 CDS YP_006295485.1 387126880 12846597 complement(1002167..1002523) 1 NC_017857.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; endonuclease 1002523 12846597 Q7A_998 Methylophaga nitratireducenticrescens endonuclease YP_006295485.1 1002167 R 754476 CDS YP_006295486.1 387126881 12846598 complement(1002529..1004394) 1 NC_017857.1 PFAM: LppC putative lipoprotein; LppC putative lipoprotein 1004394 12846598 Q7A_999 Methylophaga nitratireducenticrescens LppC putative lipoprotein YP_006295486.1 1002529 R 754476 CDS YP_006295487.1 387126882 12846599 1004487..1005332 1 NC_017857.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; rRNA small subunit methyltransferase I 1005332 12846599 Q7A_1000 Methylophaga nitratireducenticrescens rRNA small subunit methyltransferase I YP_006295487.1 1004487 D 754476 CDS YP_006295488.1 387126883 12846600 1006141..1006758 1 NC_017857.1 PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family; transcriptional regulator 1006758 12846600 Q7A_1001 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295488.1 1006141 D 754476 CDS YP_006295489.1 387126884 12846601 1006755..1008095 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein 1008095 12846601 Q7A_1002 Methylophaga nitratireducenticrescens Co/Zn/Cd efflux system membrane fusion protein YP_006295489.1 1006755 D 754476 CDS YP_006295490.1 387126885 12846602 1008092..1011196 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 1011196 12846602 Q7A_1003 Methylophaga nitratireducenticrescens acriflavin resistance protein YP_006295490.1 1008092 D 754476 CDS YP_006295491.1 387126886 12846603 1011245..1011724 1 NC_017857.1 PFAM: Bacterial domain of unknown function (DUF403); Cytochrome C'; cytochrome C'' 1011724 12846603 Q7A_1004 Methylophaga nitratireducenticrescens cytochrome C'' YP_006295491.1 1011245 D 754476 CDS YP_006295492.1 387126887 12846604 1011942..1012826 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 1012826 12846604 Q7A_1005 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006295492.1 1011942 D 754476 CDS YP_006295493.1 387126888 12846605 1012875..1014176 1 NC_017857.1 PFAM: Transposase; Il-IS_2, transposase 1014176 12846605 Q7A_1006 Methylophaga nitratireducenticrescens Il-IS_2, transposase YP_006295493.1 1012875 D 754476 CDS YP_006295494.1 387126889 12846606 1014484..1014936 1 NC_017857.1 PFAM: MraZ protein; TIGRFAM: mraZ protein; cell division protein MraZ 1014936 12846606 Q7A_1007 Methylophaga nitratireducenticrescens cell division protein MraZ YP_006295494.1 1014484 D 754476 CDS YP_006295495.1 387126890 12846607 1014946..1015884 1 NC_017857.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; rRNA small subunit methyltransferase H 1015884 12846607 Q7A_1008 Methylophaga nitratireducenticrescens rRNA small subunit methyltransferase H YP_006295495.1 1014946 D 754476 CDS YP_006295496.1 387126891 12846608 1015881..1016174 1 NC_017857.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; cell division protein FtsL 1016174 12846608 Q7A_1009 Methylophaga nitratireducenticrescens cell division protein FtsL YP_006295496.1 1015881 D 754476 CDS YP_006295497.1 387126892 12846609 1016171..1017880 1 NC_017857.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI (Peptidoglycan synthetase) 1017880 12846609 Q7A_1010 Methylophaga nitratireducenticrescens cell division protein FtsI (Peptidoglycan synthetase) YP_006295497.1 1016171 D 754476 CDS YP_006295498.1 387126893 12846610 1017877..1019397 1 NC_017857.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1019397 12846610 Q7A_1011 Methylophaga nitratireducenticrescens UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_006295498.1 1017877 D 754476 CDS YP_006295499.1 387126894 12846611 1019394..1020746 1 NC_017857.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1020746 12846611 Q7A_1012 Methylophaga nitratireducenticrescens UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_006295499.1 1019394 D 754476 CDS YP_006295500.1 387126895 12846612 1020746..1021828 1 NC_017857.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 1021828 12846612 Q7A_1013 Methylophaga nitratireducenticrescens phospho-N-acetylmuramoyl-pentapeptide- transferase YP_006295500.1 1020746 D 754476 CDS YP_006295501.1 387126896 12846613 1021825..1023180 1 NC_017857.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1023180 12846613 Q7A_1014 Methylophaga nitratireducenticrescens UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006295501.1 1021825 D 754476 CDS YP_006295502.1 387126897 12846614 1023177..1024316 1 NC_017857.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein FtsW 1024316 12846614 Q7A_1015 Methylophaga nitratireducenticrescens cell division protein FtsW YP_006295502.1 1023177 D 754476 CDS YP_006295503.1 387126898 12846615 1024313..1025392 1 NC_017857.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphoryl- undecaprenol N-acetylglucosamine transferase; glycosyltransferase 1025392 12846615 Q7A_1016 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295503.1 1024313 D 754476 CDS YP_006295504.1 387126899 12846616 1025385..1026803 1 NC_017857.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1026803 12846616 Q7A_1017 Methylophaga nitratireducenticrescens UDP-N-acetylmuramate--L-alanine ligase YP_006295504.1 1025385 D 754476 CDS YP_006295505.1 387126900 12846617 1026803..1027693 1 NC_017857.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 1027693 12846617 Q7A_1018 Methylophaga nitratireducenticrescens UDP-N-acetylenolpyruvoylglucosamine reductase YP_006295505.1 1026803 D 754476 CDS YP_006295506.1 387126901 12846618 1027690..1028628 1 NC_017857.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1028628 12846618 Q7A_1019 Methylophaga nitratireducenticrescens D-alanine--D-alanine ligase YP_006295506.1 1027690 D 754476 CDS YP_006295507.1 387126902 12846619 1028628..1029413 1 NC_017857.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type; cell division protein FtsQ 1029413 12846619 Q7A_1020 Methylophaga nitratireducenticrescens cell division protein FtsQ YP_006295507.1 1028628 D 754476 CDS YP_006295508.1 387126903 12846620 1029413..1030663 1 NC_017857.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA 1030663 12846620 Q7A_1021 Methylophaga nitratireducenticrescens cell division protein FtsA YP_006295508.1 1029413 D 754476 CDS YP_006295509.1 387126904 12846621 1030700..1031860 1 NC_017857.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ 1031860 12846621 Q7A_1022 Methylophaga nitratireducenticrescens cell division protein FtsZ YP_006295509.1 1030700 D 754476 CDS YP_006295510.1 387126905 12846622 1031933..1032850 1 NC_017857.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 1032850 12846622 Q7A_1023 Methylophaga nitratireducenticrescens UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase YP_006295510.1 1031933 D 754476 CDS YP_006295511.1 387126906 12846623 complement(1032847..1033299) 1 NC_017857.1 PFAM: Protein of unknown function (DUF721); hypothetical protein 1033299 12846623 Q7A_1024 Methylophaga nitratireducenticrescens hypothetical protein YP_006295511.1 1032847 R 754476 CDS YP_006295512.1 387126907 12846624 1033448..1034245 1 NC_017857.1 PFAM: Peptidase family M23; peptidase 1034245 12846624 Q7A_1025 Methylophaga nitratireducenticrescens peptidase YP_006295512.1 1033448 D 754476 CDS YP_006295513.1 387126908 12846625 1034382..1037087 1 NC_017857.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein export cytoplasm protein SecA ATPase RNA helicase 1037087 12846625 Q7A_1026 Methylophaga nitratireducenticrescens protein export cytoplasm protein SecA ATPase RNA helicase YP_006295513.1 1034382 D 754476 CDS YP_006295514.1 387126909 12846626 1037087..1038313 1 NC_017857.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase / N-acetylglutamate synthase 1038313 12846626 Q7A_1027 Methylophaga nitratireducenticrescens glutamate N-acetyltransferase / N-acetylglutamate synthase YP_006295514.1 1037087 D 754476 CDS YP_006295515.1 387126910 12846627 1038399..1039379 1 NC_017857.1 PFAM: Protein of unknown function (DUF3549); hypothetical protein 1039379 12846627 Q7A_1028 Methylophaga nitratireducenticrescens hypothetical protein YP_006295515.1 1038399 D 754476 CDS YP_006295516.1 387126911 12846628 complement(1039382..1039933) 1 NC_017857.1 PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein 1039933 12846628 Q7A_1029 Methylophaga nitratireducenticrescens pyridoxamine 5'-phosphate oxidase-like protein YP_006295516.1 1039382 R 754476 CDS YP_006295517.1 387126912 12846629 complement(1039917..1040480) 1 NC_017857.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 1040480 12846629 Q7A_1030 Methylophaga nitratireducenticrescens peptide deformylase YP_006295517.1 1039917 R 754476 CDS YP_006295518.1 387126913 12846630 complement(1040477..1041118) 1 NC_017857.1 PFAM: 2OG-Fe(II) oxygenase superfamily; SM-20-like protein 1041118 12846630 Q7A_1031 Methylophaga nitratireducenticrescens SM-20-like protein YP_006295518.1 1040477 R 754476 CDS YP_006295519.1 387126914 12846631 complement(1041280..1042509) 1 NC_017857.1 PFAM: Nucleoside recognition; Fused spore maturation proteins A and B 1042509 12846631 Q7A_1032 Methylophaga nitratireducenticrescens Fused spore maturation proteins A and B YP_006295519.1 1041280 R 754476 CDS YP_006295520.1 387126915 12847190 complement(1042585..1044393) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; cold-shock DEAD-box protein A 1044393 12847190 Q7A_1033 Methylophaga nitratireducenticrescens cold-shock DEAD-box protein A YP_006295520.1 1042585 R 754476 CDS YP_006295521.1 387126916 12847191 1044578..1045396 1 NC_017857.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; TC 2.A.44 family; formate efflux transporter 1045396 12847191 Q7A_1034 Methylophaga nitratireducenticrescens formate efflux transporter YP_006295521.1 1044578 D 754476 CDS YP_006295522.1 387126917 12847192 1045409..1045618 1 NC_017857.1 PFAM: Protein of unknown function (DUF1458); Dodecin Flavin-binding protein 1045618 12847192 Q7A_1035 Methylophaga nitratireducenticrescens Dodecin Flavin-binding protein YP_006295522.1 1045409 D 754476 CDS YP_006295523.1 387126918 12847193 complement(1045631..1046194) 1 NC_017857.1 PFAM: Family of unknown function (DUF500); hypothetical protein 1046194 12847193 Q7A_1036 Methylophaga nitratireducenticrescens hypothetical protein YP_006295523.1 1045631 R 754476 CDS YP_006295524.1 387126919 12847194 complement(1046307..1047905) 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein uup 1047905 12847194 Q7A_1037 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein uup YP_006295524.1 1046307 R 754476 CDS YP_006295525.1 387126920 12847195 complement(1047960..1048229) 1 NC_017857.1 PFAM: GIY-YIG catalytic domain; endonuclease 1048229 12847195 Q7A_1038 Methylophaga nitratireducenticrescens endonuclease YP_006295525.1 1047960 R 754476 CDS YP_006295526.1 387126921 12847196 complement(1048216..1048620) 1 NC_017857.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase MsrB 1048620 12847196 Q7A_1039 Methylophaga nitratireducenticrescens peptide methionine sulfoxide reductase MsrB YP_006295526.1 1048216 R 754476 CDS YP_006295527.1 387126922 12847197 complement(1048728..1052147) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; sensor histidine kinase/response regulator 1052147 12847197 Q7A_1040 Methylophaga nitratireducenticrescens sensor histidine kinase/response regulator YP_006295527.1 1048728 R 754476 CDS YP_006295528.1 387126923 12847198 complement(1052227..1053276) 1 NC_017857.1 PFAM: HD domain; Response regulator receiver domain; response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 1053276 12847198 Q7A_1041 Methylophaga nitratireducenticrescens response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase YP_006295528.1 1052227 R 754476 CDS YP_006295529.1 387126924 12847199 1053676..1054359 1 NC_017857.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 1054359 12847199 Q7A_1042 Methylophaga nitratireducenticrescens uracil-DNA glycosylase YP_006295529.1 1053676 D 754476 CDS YP_006295530.1 387126925 12847200 1054437..1056332 1 NC_017857.1 PFAM: ABC transporter; glutathione-regulated potassium-efflux system ATP-binding protein 1056332 12847200 Q7A_1043 Methylophaga nitratireducenticrescens glutathione-regulated potassium-efflux system ATP-binding protein YP_006295530.1 1054437 D 754476 CDS YP_006295531.1 387126926 12847201 1056336..1058228 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 1058228 12847201 Q7A_1044 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006295531.1 1056336 D 754476 CDS YP_006295532.1 387126927 12847202 complement(1058302..1059066) 1 NC_017857.1 elongation factor-1 alpha 1059066 12847202 Q7A_1045 Methylophaga nitratireducenticrescens elongation factor-1 alpha YP_006295532.1 1058302 R 754476 CDS YP_006295533.1 387126928 12847203 complement(1059130..1059885) 1 NC_017857.1 hypothetical protein 1059885 12847203 Q7A_1046 Methylophaga nitratireducenticrescens hypothetical protein YP_006295533.1 1059130 R 754476 CDS YP_006295534.1 387126929 12847204 complement(1060029..1060238) 1 NC_017857.1 PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein 1060238 12847204 Q7A_1047 Methylophaga nitratireducenticrescens Cold shock protein YP_006295534.1 1060029 R 754476 CDS YP_006295535.1 387126930 12847205 complement(1060534..1060800) 1 NC_017857.1 PFAM: Bacterial Fe(2+) trafficking; Fe(2+)-trafficking-like protein 1060800 12847205 Q7A_1048 Methylophaga nitratireducenticrescens Fe(2+)-trafficking-like protein YP_006295535.1 1060534 R 754476 CDS YP_006295536.1 387126931 12847206 complement(1060955..1061845) 1 NC_017857.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 1061845 12847206 Q7A_1049 Methylophaga nitratireducenticrescens A/G-specific adenine glycosylase YP_006295536.1 1060955 R 754476 CDS YP_006295537.1 387126932 12847207 complement(1061898..1064363) 1 NC_017857.1 PFAM: AsmA family; A/G-specific adenine glycosylase 1064363 12847207 Q7A_1050 Methylophaga nitratireducenticrescens A/G-specific adenine glycosylase YP_006295537.1 1061898 R 754476 CDS YP_006295538.1 387126933 12847208 complement(1064423..1066354) 1 NC_017857.1 hypothetical protein 1066354 12847208 Q7A_1051 Methylophaga nitratireducenticrescens hypothetical protein YP_006295538.1 1064423 R 754476 CDS YP_006295539.1 387126934 12847209 complement(1066356..1067639) 1 NC_017857.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 1067639 12847209 Q7A_1052 Methylophaga nitratireducenticrescens hypothetical protein YP_006295539.1 1066356 R 754476 CDS YP_006295540.1 387126935 12847210 complement(1067644..1068441) 1 NC_017857.1 PFAM: Cytochrome C assembly protein; CcsA-like protein 1068441 12847210 Q7A_1053 Methylophaga nitratireducenticrescens CcsA-like protein YP_006295540.1 1067644 R 754476 CDS YP_006295541.1 387126936 12847211 1068652..1070022 1 NC_017857.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; Signal recognition particle subunit Ffh SRP54 1070022 12847211 Q7A_1054 Methylophaga nitratireducenticrescens Signal recognition particle subunit Ffh SRP54 YP_006295541.1 1068652 D 754476 CDS YP_006295542.1 387126937 12847212 1070124..1070357 1 NC_017857.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 1070357 12847212 Q7A_1055 Methylophaga nitratireducenticrescens 30S ribosomal protein S16 YP_006295542.1 1070124 D 754476 CDS YP_006295543.1 387126938 12847213 1070379..1070900 1 NC_017857.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 1070900 12847213 Q7A_1056 Methylophaga nitratireducenticrescens 16S rRNA processing protein RimM YP_006295543.1 1070379 D 754476 CDS YP_006295544.1 387126939 12847214 1070910..1071653 1 NC_017857.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N1) -methyltransferase 1071653 12847214 Q7A_1057 Methylophaga nitratireducenticrescens tRNA (Guanine37-N1) -methyltransferase YP_006295544.1 1070910 D 754476 CDS YP_006295545.1 387126940 12847215 1071667..1072011 1 NC_017857.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 1072011 12847215 Q7A_1058 Methylophaga nitratireducenticrescens 50S ribosomal protein L19 YP_006295545.1 1071667 D 754476 CDS YP_006295546.1 387126941 12847216 1072127..1073032 1 NC_017857.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerD 1073032 12847216 Q7A_1059 Methylophaga nitratireducenticrescens tyrosine recombinase XerD YP_006295546.1 1072127 D 754476 CDS YP_006295547.1 387126942 12847217 1073101..1073586 1 NC_017857.1 PFAM: Protein of unknown function (DUF520); hypothetical protein 1073586 12847217 Q7A_1060 Methylophaga nitratireducenticrescens hypothetical protein YP_006295547.1 1073101 D 754476 CDS YP_006295548.1 387126943 12847218 1073599..1074318 1 NC_017857.1 PFAM: Disulfide bond isomerase protein N-terminus; thiol:disulfide interchange protein DsbC 1074318 12847218 Q7A_1061 Methylophaga nitratireducenticrescens thiol:disulfide interchange protein DsbC YP_006295548.1 1073599 D 754476 CDS YP_006295549.1 387126944 12847219 complement(1074315..1075067) 1 NC_017857.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 1075067 12847219 Q7A_1062 Methylophaga nitratireducenticrescens UDP-2,3-diacylglucosamine hydrolase YP_006295549.1 1074315 R 754476 CDS YP_006295550.1 387126945 12847220 complement(1075085..1075666) 1 NC_017857.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase ppiB 1075666 12847220 Q7A_1063 Methylophaga nitratireducenticrescens peptidyl-prolyl cis-trans isomerase ppiB YP_006295550.1 1075085 R 754476 CDS YP_006295551.1 387126946 12847221 1075832..1077499 1 NC_017857.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1077499 12847221 Q7A_1064 Methylophaga nitratireducenticrescens glutaminyl-tRNA synthetase YP_006295551.1 1075832 D 754476 CDS YP_006295552.1 387126947 12847222 1077575..1078885 1 NC_017857.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 1078885 12847222 Q7A_1065 Methylophaga nitratireducenticrescens cysteinyl-tRNA synthetase YP_006295552.1 1077575 D 754476 CDS YP_006295553.1 387126948 12847223 1079042..1080238 1 NC_017857.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase 1080238 12847223 Q7A_1066 Methylophaga nitratireducenticrescens acetate kinase YP_006295553.1 1079042 D 754476 CDS YP_006295554.1 387126949 12847224 1080252..1082633 1 NC_017857.1 PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain; Xylulose-5-phosphate phosphoketolase, Fructose-6-phosphate phosphoketolase 1082633 12847224 Q7A_1067 Methylophaga nitratireducenticrescens Xylulose-5-phosphate phosphoketolase, Fructose-6-phosphate phosphoketolase YP_006295554.1 1080252 D 754476 CDS YP_006295555.1 387126950 12847225 complement(1082679..1083533) 1 NC_017857.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase 1083533 12847225 Q7A_1068 Methylophaga nitratireducenticrescens methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase YP_006295555.1 1082679 R 754476 CDS YP_006295556.1 387126951 12847226 complement(1083741..1085387) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone/plastoquinone (complex I) oxidoreductase 1085387 12847226 Q7A_1069 Methylophaga nitratireducenticrescens NADH-ubiquinone/plastoquinone (complex I) oxidoreductase YP_006295556.1 1083741 R 754476 CDS YP_006295557.1 387126952 12847227 complement(1085384..1086901) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase subunit L 1086901 12847227 Q7A_1070 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit L YP_006295557.1 1085384 R 754476 CDS YP_006295558.1 387126953 12847228 complement(1086901..1088322) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; hydrogenase-4 component B / Formate hydrogenlyase subunit 3 1088322 12847228 Q7A_1071 Methylophaga nitratireducenticrescens hydrogenase-4 component B / Formate hydrogenlyase subunit 3 YP_006295558.1 1086901 R 754476 CDS YP_006295559.1 387126954 12847229 complement(1088319..1088603) 1 NC_017857.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase, subunit 4L 1088603 12847229 Q7A_1072 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase, subunit 4L YP_006295559.1 1088319 R 754476 CDS YP_006295560.1 387126955 12847230 complement(1088603..1089502) 1 NC_017857.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B 1089502 12847230 Q7A_1073 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B YP_006295560.1 1088603 R 754476 CDS YP_006295561.1 387126956 12847231 complement(1089492..1089788) 1 NC_017857.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; multisubunit Na+/H+ antiporter subunit MnhG 1089788 12847231 Q7A_1074 Methylophaga nitratireducenticrescens multisubunit Na+/H+ antiporter subunit MnhG YP_006295561.1 1089492 R 754476 CDS YP_006295562.1 387126957 12847232 complement(1089781..1090035) 1 NC_017857.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); multiple resistance and pH regulation protein F 1090035 12847232 Q7A_1075 Methylophaga nitratireducenticrescens multiple resistance and pH regulation protein F YP_006295562.1 1089781 R 754476 CDS YP_006295563.1 387126958 12847233 complement(1090301..1090519) 1 NC_017857.1 hypothetical protein 1090519 12847233 Q7A_1076 Methylophaga nitratireducenticrescens hypothetical protein YP_006295563.1 1090301 R 754476 CDS YP_006295564.1 387126959 12847236 1091276..1092367 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1092367 12847236 Q7A_1079 Methylophaga nitratireducenticrescens dTDP-glucose 4,6-dehydratase YP_006295564.1 1091276 D 754476 CDS YP_006295565.1 387126960 12847237 1092364..1093245 1 NC_017857.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 1093245 12847237 Q7A_1080 Methylophaga nitratireducenticrescens glucose-1-phosphate thymidylyltransferase YP_006295565.1 1092364 D 754476 CDS YP_006295566.1 387126961 12847238 1093245..1093790 1 NC_017857.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 1093790 12847238 Q7A_1081 Methylophaga nitratireducenticrescens dTDP-4-dehydrorhamnose 3,5-epimerase YP_006295566.1 1093245 D 754476 CDS YP_006295567.1 387126962 12847239 1093791..1094663 1 NC_017857.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1094663 12847239 Q7A_1082 Methylophaga nitratireducenticrescens dTDP-4-dehydrorhamnose reductase YP_006295567.1 1093791 D 754476 CDS YP_006295568.1 387126963 12847240 1094712..1096670 1 NC_017857.1 PFAM: Polysaccharide biosynthesis protein; Nucleoside-diphosphate sugar epimerase/dehydratase 1096670 12847240 Q7A_1083 Methylophaga nitratireducenticrescens Nucleoside-diphosphate sugar epimerase/dehydratase YP_006295568.1 1094712 D 754476 CDS YP_006295569.1 387126964 12847241 1096680..1097858 1 NC_017857.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; UDP-glucose dehydrogenase 1097858 12847241 Q7A_1084 Methylophaga nitratireducenticrescens UDP-glucose dehydrogenase YP_006295569.1 1096680 D 754476 CDS YP_006295570.1 387126965 12847242 1097973..1099871 1 NC_017857.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 1099871 12847242 Q7A_1085 Methylophaga nitratireducenticrescens glucosamine--fructose-6-phosphate aminotransferase YP_006295570.1 1097973 D 754476 CDS YP_006295571.1 387126966 12847243 1099955..1100293 1 NC_017857.1 PFAM: MarR family; TIGRFAM: EPS-associated transcriptional regulator, MarR family; transcriptional regulator 1100293 12847243 Q7A_1086 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295571.1 1099955 D 754476 CDS YP_006295572.1 387126967 12847244 1100395..1101567 1 NC_017857.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Aminotransferase 1101567 12847244 Q7A_1087 Methylophaga nitratireducenticrescens Aminotransferase YP_006295572.1 1100395 D 754476 CDS YP_006295573.1 387126968 12847245 1101582..1102268 1 NC_017857.1 PFAM: WbqC-like protein family; WbqC-like protein 1102268 12847245 Q7A_1088 Methylophaga nitratireducenticrescens WbqC-like protein YP_006295573.1 1101582 D 754476 CDS YP_006295574.1 387126969 12847246 1102273..1103244 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: intein N-terminal splicing region; UDP-glucose 4-epimerase 1103244 12847246 Q7A_1089 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006295574.1 1102273 D 754476 CDS YP_006295575.1 387126970 12847247 1103251..1104267 1 NC_017857.1 hypothetical protein 1104267 12847247 Q7A_1090 Methylophaga nitratireducenticrescens hypothetical protein YP_006295575.1 1103251 D 754476 CDS YP_006295576.1 387126971 12847248 1104257..1104958 1 NC_017857.1 hypothetical protein 1104958 12847248 Q7A_1091 Methylophaga nitratireducenticrescens hypothetical protein YP_006295576.1 1104257 D 754476 CDS YP_006295577.1 387126972 12847249 1104924..1106462 1 NC_017857.1 PFAM: Polysaccharide biosynthesis protein; capsular polysaccharide repeat unit transporter 1106462 12847249 Q7A_1092 Methylophaga nitratireducenticrescens capsular polysaccharide repeat unit transporter YP_006295577.1 1104924 D 754476 CDS YP_006295578.1 387126973 12847250 1106464..1107399 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyl transferase 1107399 12847250 Q7A_1093 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295578.1 1106464 D 754476 CDS YP_006295579.1 387126974 12847251 1108115..1109026 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 1109026 12847251 Q7A_1094 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295579.1 1108115 D 754476 CDS YP_006295580.1 387126975 12847252 1109083..1109832 1 NC_017857.1 PFAM: Galactosyltransferase; Glycosyl transferase family 2; dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL 1109832 12847252 Q7A_1095 Methylophaga nitratireducenticrescens dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL YP_006295580.1 1109083 D 754476 CDS YP_006295581.1 387126976 12847253 1110006..1111457 1 NC_017857.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 1111457 12847253 Q7A_1096 Methylophaga nitratireducenticrescens phosphomannomutase YP_006295581.1 1110006 D 754476 CDS YP_006295582.1 387126977 12847254 1111457..1112431 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1112431 12847254 Q7A_1097 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006295582.1 1111457 D 754476 CDS YP_006295583.1 387126978 12847255 1112444..1113004 1 NC_017857.1 PFAM: Bacterial sugar transferase; lipid carrier : UDP-N-acetylgalactosaminyltransferase 1113004 12847255 Q7A_1098 Methylophaga nitratireducenticrescens lipid carrier : UDP-N-acetylgalactosaminyltransferase YP_006295583.1 1112444 D 754476 CDS YP_006295584.1 387126979 12847256 1113339..1114304 1 NC_017857.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 1114304 12847256 Q7A_1099 Methylophaga nitratireducenticrescens mannose-1-phosphate guanylyltransferase YP_006295584.1 1113339 D 754476 CDS YP_006295585.1 387126980 12847257 1114513..1116009 1 NC_017857.1 hydrolase-like protein (HAD superfamily) 1116009 12847257 Q7A_1100 Methylophaga nitratireducenticrescens hydrolase-like protein (HAD superfamily) YP_006295585.1 1114513 D 754476 CDS YP_006295586.1 387126981 12847258 1116226..1117149 1 NC_017857.1 PFAM: HMGL-like; 4-hydroxy-2-oxovalerate aldolase 1117149 12847258 Q7A_1101 Methylophaga nitratireducenticrescens 4-hydroxy-2-oxovalerate aldolase YP_006295586.1 1116226 D 754476 CDS YP_006295587.1 387126982 12847259 1117600..1118337 1 NC_017857.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 1118337 12847259 Q7A_1102 Methylophaga nitratireducenticrescens 3-deoxy-manno-octulosonate cytidylyltransferase YP_006295587.1 1117600 D 754476 CDS YP_006295588.1 387126983 12847260 1118334..1118999 1 NC_017857.1 haloacid dehalogenase-like hydrolase 1118999 12847260 Q7A_1103 Methylophaga nitratireducenticrescens haloacid dehalogenase-like hydrolase YP_006295588.1 1118334 D 754476 CDS YP_006295589.1 387126984 12847261 1118996..1120141 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 1120141 12847261 Q7A_1104 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295589.1 1118996 D 754476 CDS YP_006295590.1 387126985 12847262 1120150..1120992 1 NC_017857.1 TIGRFAM: methyltransferase, FkbM family; methyltransferase 1120992 12847262 Q7A_1105 Methylophaga nitratireducenticrescens methyltransferase YP_006295590.1 1120150 D 754476 CDS YP_006295591.1 387126986 12847263 1121311..1122354 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 1122354 12847263 Q7A_1106 Methylophaga nitratireducenticrescens GDP-mannose 4,6-dehydratase YP_006295591.1 1121311 D 754476 CDS YP_006295592.1 387126987 12847264 1122488..1123330 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1123330 12847264 Q7A_1107 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006295592.1 1122488 D 754476 CDS YP_006295593.1 387126988 12847265 1123338..1124471 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase 1124471 12847265 Q7A_1108 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295593.1 1123338 D 754476 CDS YP_006295594.1 387126989 12847266 1124599..1125603 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 1125603 12847266 Q7A_1109 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295594.1 1124599 D 754476 CDS YP_006295595.1 387126990 12847267 complement(1125627..1126337) 1 NC_017857.1 PFAM: ABC transporter; Teichoic acid export ATP-binding protein TagH 1126337 12847267 Q7A_1110 Methylophaga nitratireducenticrescens Teichoic acid export ATP-binding protein TagH YP_006295595.1 1125627 R 754476 CDS YP_006295596.1 387126991 12847268 complement(1126334..1127713) 1 NC_017857.1 PFAM: ABC-2 type transporter; O-antigen export system permease protein RfbD 1127713 12847268 Q7A_1111 Methylophaga nitratireducenticrescens O-antigen export system permease protein RfbD YP_006295596.1 1126334 R 754476 CDS YP_006295597.1 387126992 12847269 1127942..1128067 1 NC_017857.1 hypothetical protein 1128067 12847269 Q7A_1112 Methylophaga nitratireducenticrescens hypothetical protein YP_006295597.1 1127942 D 754476 CDS YP_006295598.1 387126993 12847270 1128145..1128747 1 NC_017857.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); adenylylsulfate kinase 1128747 12847270 Q7A_1113 Methylophaga nitratireducenticrescens adenylylsulfate kinase YP_006295598.1 1128145 D 754476 CDS YP_006295599.1 387126994 12847271 1128754..1129713 1 NC_017857.1 hypothetical protein 1129713 12847271 Q7A_1114 Methylophaga nitratireducenticrescens hypothetical protein YP_006295599.1 1128754 D 754476 CDS YP_006295600.1 387126995 12847272 1129840..1130106 1 NC_017857.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; late competence protein ComEA, DNA receptor 1130106 12847272 Q7A_1115 Methylophaga nitratireducenticrescens late competence protein ComEA, DNA receptor YP_006295600.1 1129840 D 754476 CDS YP_006295601.1 387126996 12847273 1130617..1131126 1 NC_017857.1 PFAM: LAGLIDADG endonuclease; LAGLIDADG endonuclease 1131126 12847273 Q7A_1116 Methylophaga nitratireducenticrescens LAGLIDADG endonuclease YP_006295601.1 1130617 D 754476 CDS YP_006295602.1 387126997 12847274 1131186..1132274 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent protease La 1132274 12847274 Q7A_1117 Methylophaga nitratireducenticrescens ATP-dependent protease La YP_006295602.1 1131186 D 754476 CDS YP_006295603.1 387126998 12847275 1132332..1132679 1 NC_017857.1 hypothetical protein 1132679 12847275 Q7A_1118 Methylophaga nitratireducenticrescens hypothetical protein YP_006295603.1 1132332 D 754476 CDS YP_006295604.1 387126999 12847276 complement(1133362..1134894) 1 NC_017857.1 PFAM: Transposase IS66 family; transposase 1134894 12847276 Q7A_1119 Methylophaga nitratireducenticrescens transposase YP_006295604.1 1133362 R 754476 CDS YP_006295605.1 387127000 12847277 complement(1134945..1135289) 1 NC_017857.1 PFAM: IS66 Orf2 like protein; transposase 1135289 12847277 Q7A_1120 Methylophaga nitratireducenticrescens transposase YP_006295605.1 1134945 R 754476 CDS YP_006295606.1 387127001 12847278 complement(1135286..1135645) 1 NC_017857.1 PFAM: Transposase; transposase 1135645 12847278 Q7A_1121 Methylophaga nitratireducenticrescens transposase YP_006295606.1 1135286 R 754476 CDS YP_006295607.1 387127002 12847280 complement(1136994..1137425) 1 NC_017857.1 hypothetical protein 1137425 12847280 Q7A_1124 Methylophaga nitratireducenticrescens hypothetical protein YP_006295607.1 1136994 R 754476 CDS YP_006295608.1 387127003 12847281 1138486..1139169 1 NC_017857.1 hypothetical protein 1139169 12847281 Q7A_1125 Methylophaga nitratireducenticrescens hypothetical protein YP_006295608.1 1138486 D 754476 CDS YP_006295609.1 387127004 12847282 complement(1139198..1141798) 1 NC_017857.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; (Protein-PII) uridylyltransferase 1141798 12847282 Q7A_1126 Methylophaga nitratireducenticrescens (Protein-PII) uridylyltransferase YP_006295609.1 1139198 R 754476 CDS YP_006295610.1 387127005 12847283 complement(1141811..1142578) 1 NC_017857.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 1142578 12847283 Q7A_1127 Methylophaga nitratireducenticrescens methionine aminopeptidase YP_006295610.1 1141811 R 754476 CDS YP_006295611.1 387127006 12847284 1142840..1143592 1 NC_017857.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 1143592 12847284 Q7A_1128 Methylophaga nitratireducenticrescens 30S ribosomal protein S2 YP_006295611.1 1142840 D 754476 CDS YP_006295612.1 387127007 12847285 1143697..1144578 1 NC_017857.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 1144578 12847285 Q7A_1129 Methylophaga nitratireducenticrescens translation elongation factor Ts YP_006295612.1 1143697 D 754476 CDS YP_006295613.1 387127008 12847286 1144581..1145306 1 NC_017857.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 1145306 12847286 Q7A_1130 Methylophaga nitratireducenticrescens uridylate kinase YP_006295613.1 1144581 D 754476 CDS YP_006295614.1 387127009 12847287 1145315..1145872 1 NC_017857.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 1145872 12847287 Q7A_1131 Methylophaga nitratireducenticrescens ribosome recycling factor YP_006295614.1 1145315 D 754476 CDS YP_006295615.1 387127010 12847288 1145941..1146630 1 NC_017857.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl pyrophosphate synthetase 1146630 12847288 Q7A_1132 Methylophaga nitratireducenticrescens undecaprenyl pyrophosphate synthetase YP_006295615.1 1145941 D 754476 CDS YP_006295616.1 387127011 12847289 1146632..1147456 1 NC_017857.1 PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase 1147456 12847289 Q7A_1133 Methylophaga nitratireducenticrescens phosphatidate cytidylyltransferase YP_006295616.1 1146632 D 754476 CDS YP_006295617.1 387127012 12847290 1147456..1148646 1 NC_017857.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1148646 12847290 Q7A_1134 Methylophaga nitratireducenticrescens 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006295617.1 1147456 D 754476 CDS YP_006295618.1 387127013 12847291 1148634..1149971 1 NC_017857.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; membrane-associated zinc metalloprotease 1149971 12847291 Q7A_1135 Methylophaga nitratireducenticrescens membrane-associated zinc metalloprotease YP_006295618.1 1148634 D 754476 CDS YP_006295619.1 387127014 12847292 1150028..1152304 1 NC_017857.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly factor YaeT precursor 1152304 12847292 Q7A_1136 Methylophaga nitratireducenticrescens outer membrane protein assembly factor YaeT precursor YP_006295619.1 1150028 D 754476 CDS YP_006295620.1 387127015 12847293 1152325..1152825 1 NC_017857.1 PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone Skp (OmpH)-like protein 1152825 12847293 Q7A_1137 Methylophaga nitratireducenticrescens outer membrane chaperone Skp (OmpH)-like protein YP_006295620.1 1152325 D 754476 CDS YP_006295621.1 387127016 12847294 1152839..1153852 1 NC_017857.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1153852 12847294 Q7A_1138 Methylophaga nitratireducenticrescens UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_006295621.1 1152839 D 754476 CDS YP_006295622.1 387127017 12847295 1153949..1154398 1 NC_017857.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 1154398 12847295 Q7A_1139 Methylophaga nitratireducenticrescens (3R)-hydroxymyristoyl-ACP dehydratase YP_006295622.1 1153949 D 754476 CDS YP_006295623.1 387127018 12847296 1154395..1155165 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 1155165 12847296 Q7A_1140 Methylophaga nitratireducenticrescens acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_006295623.1 1154395 D 754476 CDS YP_006295624.1 387127019 12847297 complement(1155201..1156340) 1 NC_017857.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; Ammonium transporter 1156340 12847297 Q7A_1141 Methylophaga nitratireducenticrescens Ammonium transporter YP_006295624.1 1155201 R 754476 CDS YP_006295625.1 387127020 12847298 1156682..1157323 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133); hypothetical protein 1157323 12847298 Q7A_1142 Methylophaga nitratireducenticrescens hypothetical protein YP_006295625.1 1156682 D 754476 CDS YP_006295626.1 387127021 12847299 1157313..1158488 1 NC_017857.1 PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL; outer membrane YfgL-like protein 1158488 12847299 Q7A_1143 Methylophaga nitratireducenticrescens outer membrane YfgL-like protein YP_006295626.1 1157313 D 754476 CDS YP_006295627.1 387127022 12847300 1158485..1159894 1 NC_017857.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein EngA 1159894 12847300 Q7A_1144 Methylophaga nitratireducenticrescens GTP-binding protein EngA YP_006295627.1 1158485 D 754476 CDS YP_006295628.1 387127023 12847301 complement(1159992..1160330) 1 NC_017857.1 hypothetical protein 1160330 12847301 Q7A_1145 Methylophaga nitratireducenticrescens hypothetical protein YP_006295628.1 1159992 R 754476 CDS YP_006295629.1 387127024 12847302 1160456..1162636 1 NC_017857.1 PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family; ABC transporter 1162636 12847302 Q7A_1146 Methylophaga nitratireducenticrescens ABC transporter YP_006295629.1 1160456 D 754476 CDS YP_006295630.1 387127025 12847303 1162641..1163969 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD-like secretion protein 1163969 12847303 Q7A_1147 Methylophaga nitratireducenticrescens HlyD-like secretion protein YP_006295630.1 1162641 D 754476 CDS YP_006295631.1 387127026 12847304 1163985..1164635 1 NC_017857.1 PFAM: Bacterial regulatory proteins, luxR family; two-component response regulator 1164635 12847304 Q7A_1148 Methylophaga nitratireducenticrescens two-component response regulator YP_006295631.1 1163985 D 754476 CDS YP_006295632.1 387127027 12847305 1164804..1166093 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein 1166093 12847305 Q7A_1149 Methylophaga nitratireducenticrescens type I secretion outer membrane protein YP_006295632.1 1164804 D 754476 CDS YP_006295633.1 387127028 12847306 1166297..1166755 1 NC_017857.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA; 3-hydroxydecanoyl-ACP dehydratase 1166755 12847306 Q7A_1150 Methylophaga nitratireducenticrescens 3-hydroxydecanoyl-ACP dehydratase YP_006295633.1 1166297 D 754476 CDS YP_006295634.1 387127029 12847307 1166765..1167982 1 NC_017857.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; 3-oxoacyl-ACP synthase 1167982 12847307 Q7A_1151 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP synthase YP_006295634.1 1166765 D 754476 CDS YP_006295635.1 387127030 12847308 complement(1168026..1168178) 1 NC_017857.1 hypothetical protein 1168178 12847308 Q7A_1152 Methylophaga nitratireducenticrescens hypothetical protein YP_006295635.1 1168026 R 754476 CDS YP_006295636.1 387127031 12847309 1168583..1169347 1 NC_017857.1 alpha/beta fold family hydrolase 1169347 12847309 Q7A_1153 Methylophaga nitratireducenticrescens alpha/beta fold family hydrolase YP_006295636.1 1168583 D 754476 CDS YP_006295637.1 387127032 12847310 1169340..1169690 1 NC_017857.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; pyrophosphatase 1169690 12847310 Q7A_1154 Methylophaga nitratireducenticrescens pyrophosphatase YP_006295637.1 1169340 D 754476 CDS YP_006295638.1 387127033 12847311 1169751..1170608 1 NC_017857.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 1170608 12847311 Q7A_1155 Methylophaga nitratireducenticrescens formyltetrahydrofolate deformylase YP_006295638.1 1169751 D 754476 CDS YP_006295639.1 387127034 12847312 1171001..1171762 1 NC_017857.1 PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase 1171762 12847312 Q7A_1156 Methylophaga nitratireducenticrescens short-chain dehydrogenase/reductase YP_006295639.1 1171001 D 754476 CDS YP_006295640.1 387127035 12847313 complement(1171932..1174061) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Zinc-regulated outer membrane receptor 1174061 12847313 Q7A_1157 Methylophaga nitratireducenticrescens Zinc-regulated outer membrane receptor YP_006295640.1 1171932 R 754476 CDS YP_006295641.1 387127036 12847314 complement(1174135..1174422) 1 NC_017857.1 hypothetical protein 1174422 12847314 Q7A_1158 Methylophaga nitratireducenticrescens hypothetical protein YP_006295641.1 1174135 R 754476 CDS YP_006295642.1 387127037 12847315 complement(1174427..1175569) 1 NC_017857.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade; N-succinyl-L,L-diaminopimelate desuccinylase 1175569 12847315 Q7A_1159 Methylophaga nitratireducenticrescens N-succinyl-L,L-diaminopimelate desuccinylase YP_006295642.1 1174427 R 754476 CDS YP_006295643.1 387127038 12847316 complement(1175559..1175903) 1 NC_017857.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; glutathione-dependent thiol reductase 1175903 12847316 Q7A_1160 Methylophaga nitratireducenticrescens glutathione-dependent thiol reductase YP_006295643.1 1175559 R 754476 CDS YP_006295644.1 387127039 12847317 complement(1176058..1176879) 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1176879 12847317 Q7A_1161 Methylophaga nitratireducenticrescens 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_006295644.1 1176058 R 754476 CDS YP_006295645.1 387127040 12847318 complement(1176893..1178092) 1 NC_017857.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase; N-succinyl-L,L-diaminopimelate aminotransferase alternative 1178092 12847318 Q7A_1162 Methylophaga nitratireducenticrescens N-succinyl-L,L-diaminopimelate aminotransferase alternative YP_006295645.1 1176893 R 754476 CDS YP_006295646.1 387127041 12847319 1178166..1179050 1 NC_017857.1 PFAM: EamA-like transporter family; permease 1179050 12847319 Q7A_1163 Methylophaga nitratireducenticrescens permease YP_006295646.1 1178166 D 754476 CDS YP_006295647.1 387127042 12847320 1179147..1179638 1 NC_017857.1 dioxygenase 1179638 12847320 Q7A_1164 Methylophaga nitratireducenticrescens dioxygenase YP_006295647.1 1179147 D 754476 CDS YP_006295648.1 387127043 12847321 1180447..1180563 1 NC_017857.1 hypothetical protein 1180563 12847321 Q7A_1165 Methylophaga nitratireducenticrescens hypothetical protein YP_006295648.1 1180447 D 754476 CDS YP_006295649.1 387127044 12847322 complement(1180743..1181609) 1 NC_017857.1 PFAM: PP-loop family; tRNA(Cytosine32)-2-thiocytidine synthetase 1181609 12847322 Q7A_1166 Methylophaga nitratireducenticrescens tRNA(Cytosine32)-2-thiocytidine synthetase YP_006295649.1 1180743 R 754476 CDS YP_006295650.1 387127045 12847323 complement(1181609..1182874) 1 NC_017857.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin biosynthesis protein MoeA 1182874 12847323 Q7A_1167 Methylophaga nitratireducenticrescens molybdopterin biosynthesis protein MoeA YP_006295650.1 1181609 R 754476 CDS YP_006295651.1 387127046 12847324 complement(1182867..1183982) 1 NC_017857.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1183982 12847324 Q7A_1168 Methylophaga nitratireducenticrescens molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_006295651.1 1182867 R 754476 CDS YP_006295652.1 387127047 12847325 1184102..1184665 1 NC_017857.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 1184665 12847325 Q7A_1169 Methylophaga nitratireducenticrescens clan AA aspartic protease YP_006295652.1 1184102 D 754476 CDS YP_006295653.1 387127048 12847326 complement(1184783..1185592) 1 NC_017857.1 PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; GTP cyclohydrolase I type 2 1185592 12847326 Q7A_1170 Methylophaga nitratireducenticrescens GTP cyclohydrolase I type 2 YP_006295653.1 1184783 R 754476 CDS YP_006295654.1 387127049 12847327 complement(1185601..1185897) 1 NC_017857.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD 1185897 12847327 Q7A_1171 Methylophaga nitratireducenticrescens queuosine biosynthesis protein QueD YP_006295654.1 1185601 R 754476 CDS YP_006295655.1 387127050 12847328 complement(1186029..1187864) 1 NC_017857.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1187864 12847328 Q7A_1172 Methylophaga nitratireducenticrescens 1-deoxy-D-xylulose-5-phosphate synthase YP_006295655.1 1186029 R 754476 CDS YP_006295656.1 387127051 12847329 complement(1187864..1188730) 1 NC_017857.1 PFAM: Polyprenyl synthetase; Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase 1188730 12847329 Q7A_1173 Methylophaga nitratireducenticrescens polyprenyl synthetase YP_006295656.1 1187864 R 754476 CDS YP_006295657.1 387127052 12847330 complement(1188757..1189002) 1 NC_017857.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit 1189002 12847330 Q7A_1174 Methylophaga nitratireducenticrescens Exodeoxyribonuclease VII small subunit YP_006295657.1 1188757 R 754476 CDS YP_006295658.1 387127053 12847331 1189128..1190069 1 NC_017857.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin kinase / FMN adenylyltransferase 1190069 12847331 Q7A_1175 Methylophaga nitratireducenticrescens riboflavin kinase / FMN adenylyltransferase YP_006295658.1 1189128 D 754476 CDS YP_006295659.1 387127054 12847332 complement(1190078..1190302) 1 NC_017857.1 hypothetical protein 1190302 12847332 Q7A_1176 Methylophaga nitratireducenticrescens hypothetical protein YP_006295659.1 1190078 R 754476 CDS YP_006295660.1 387127055 12847333 complement(1190305..1191351) 1 NC_017857.1 PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance; heat shock protein 1191351 12847333 Q7A_1177 Methylophaga nitratireducenticrescens heat shock protein YP_006295660.1 1190305 R 754476 CDS YP_006295661.1 387127056 12847334 complement(1191380..1191793) 1 NC_017857.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; Regulator of nucleoside diphosphate kinase 1191793 12847334 Q7A_1178 Methylophaga nitratireducenticrescens Regulator of nucleoside diphosphate kinase YP_006295661.1 1191380 R 754476 CDS YP_006295662.1 387127057 12847335 complement(1191965..1192210) 1 NC_017857.1 hypothetical protein 1192210 12847335 Q7A_1179 Methylophaga nitratireducenticrescens hypothetical protein YP_006295662.1 1191965 R 754476 CDS YP_006295663.1 387127058 12847336 complement(1192280..1194538) 1 NC_017857.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein 1194538 12847336 Q7A_1180 Methylophaga nitratireducenticrescens hypothetical protein YP_006295663.1 1192280 R 754476 CDS YP_006295664.1 387127059 12847337 complement(1194535..1194648) 1 NC_017857.1 hypothetical protein 1194648 12847337 Q7A_1181 Methylophaga nitratireducenticrescens hypothetical protein YP_006295664.1 1194535 R 754476 CDS YP_006295665.1 387127060 12847338 complement(1194669..1195001) 1 NC_017857.1 PFAM: Small Multidrug Resistance protein; Ethidium bromide-methyl viologen resistance protein EmrE 1195001 12847338 Q7A_1182 Methylophaga nitratireducenticrescens Ethidium bromide-methyl viologen resistance protein EmrE YP_006295665.1 1194669 R 754476 CDS YP_006295666.1 387127061 12847339 complement(1195012..1195380) 1 NC_017857.1 PFAM: Domain of unknown function DUF; hypothetical protein 1195380 12847339 Q7A_1183 Methylophaga nitratireducenticrescens hypothetical protein YP_006295666.1 1195012 R 754476 CDS YP_006295667.1 387127062 12847340 complement(1195384..1196025) 1 NC_017857.1 hypothetical protein 1196025 12847340 Q7A_1184 Methylophaga nitratireducenticrescens hypothetical protein YP_006295667.1 1195384 R 754476 CDS YP_006295668.1 387127063 12847341 1196236..1196976 1 NC_017857.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; ferredoxin--NADP(+) reductase 1196976 12847341 Q7A_1185 Methylophaga nitratireducenticrescens ferredoxin--NADP(+) reductase YP_006295668.1 1196236 D 754476 CDS YP_006295669.1 387127064 12847342 1197213..1198391 1 NC_017857.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; N-acetyl-L,L-diaminopimelate deacetylase 1198391 12847342 Q7A_1186 Methylophaga nitratireducenticrescens N-acetyl-L,L-diaminopimelate deacetylase YP_006295669.1 1197213 D 754476 CDS YP_006295670.1 387127065 12847343 1198426..1199706 1 NC_017857.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; diaminobutyrate-pyruvate aminotransferase 1199706 12847343 Q7A_1187 Methylophaga nitratireducenticrescens diaminobutyrate-pyruvate aminotransferase YP_006295670.1 1198426 D 754476 CDS YP_006295671.1 387127066 12847344 1199703..1200962 1 NC_017857.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro dipeptidase 1200962 12847344 Q7A_1188 Methylophaga nitratireducenticrescens Xaa-Pro dipeptidase YP_006295671.1 1199703 D 754476 CDS YP_006295672.1 387127067 12847345 1200978..1202339 1 NC_017857.1 PFAM: Aldehyde dehydrogenase family; succinate-semialdehyde dehydrogenase 1202339 12847345 Q7A_1189 Methylophaga nitratireducenticrescens succinate-semialdehyde dehydrogenase YP_006295672.1 1200978 D 754476 CDS YP_006295673.1 387127068 12847346 complement(1202380..1202967) 1 NC_017857.1 PFAM: Protein of unknown function (DUF330); hypothetical protein 1202967 12847346 Q7A_1190 Methylophaga nitratireducenticrescens hypothetical protein YP_006295673.1 1202380 R 754476 CDS YP_006295674.1 387127069 12847347 complement(1202980..1204650) 1 NC_017857.1 PFAM: mce related protein; Paraquat-inducible protein B 1204650 12847347 Q7A_1191 Methylophaga nitratireducenticrescens Paraquat-inducible protein B YP_006295674.1 1202980 R 754476 CDS YP_006295675.1 387127070 12847348 complement(1204643..1205983) 1 NC_017857.1 PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; Paraquat-inducible protein A 1205983 12847348 Q7A_1192 Methylophaga nitratireducenticrescens Paraquat-inducible protein A YP_006295675.1 1204643 R 754476 CDS YP_006295676.1 387127071 12847349 1206017..1206136 1 NC_017857.1 hypothetical protein 1206136 12847349 Q7A_1193 Methylophaga nitratireducenticrescens hypothetical protein YP_006295676.1 1206017 D 754476 CDS YP_006295677.1 387127072 12847350 complement(1206125..1206238) 1 NC_017857.1 hypothetical protein 1206238 12847350 Q7A_1194 Methylophaga nitratireducenticrescens hypothetical protein YP_006295677.1 1206125 R 754476 CDS YP_006295678.1 387127073 12847351 1206266..1206508 1 NC_017857.1 hypothetical protein 1206508 12847351 Q7A_1195 Methylophaga nitratireducenticrescens hypothetical protein YP_006295678.1 1206266 D 754476 CDS YP_006295679.1 387127074 12847352 complement(1206569..1206910) 1 NC_017857.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA 1206910 12847352 Q7A_1196 Methylophaga nitratireducenticrescens alkylphosphonate utilization operon protein PhnA YP_006295679.1 1206569 R 754476 CDS YP_006295680.1 387127075 12847353 complement(1207038..1207361) 1 NC_017857.1 ArsR family transcriptional regulator 1207361 12847353 Q7A_1197 Methylophaga nitratireducenticrescens ArsR family transcriptional regulator YP_006295680.1 1207038 R 754476 CDS YP_006295681.1 387127076 12847354 1207463..1208449 1 NC_017857.1 PFAM: Predicted permease; permease 1208449 12847354 Q7A_1198 Methylophaga nitratireducenticrescens permease YP_006295681.1 1207463 D 754476 CDS YP_006295682.1 387127077 12847355 complement(1208434..1208907) 1 NC_017857.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1208907 12847355 Q7A_1199 Methylophaga nitratireducenticrescens 3-demethylubiquinone-9 3-methyltransferase YP_006295682.1 1208434 R 754476 CDS YP_006295683.1 387127078 12847356 complement(1208904..1209296) 1 NC_017857.1 PFAM: YCII-related domain; hypothetical protein 1209296 12847356 Q7A_1200 Methylophaga nitratireducenticrescens hypothetical protein YP_006295683.1 1208904 R 754476 CDS YP_006295684.1 387127079 12847357 complement(1209344..1210174) 1 NC_017857.1 PFAM: YCII-related domain; 3-demethylubiquinone-9 3-methyltransferase; phnB-like protein 1210174 12847357 Q7A_1201 Methylophaga nitratireducenticrescens phnB-like protein YP_006295684.1 1209344 R 754476 CDS YP_006295685.1 387127080 12847358 complement(1210185..1210628) 1 NC_017857.1 PFAM: Calcium/calmodulin dependent protein kinase II Association; ketosteroid isomerase 1210628 12847358 Q7A_1202 Methylophaga nitratireducenticrescens ketosteroid isomerase YP_006295685.1 1210185 R 754476 CDS YP_006295686.1 387127081 12847359 1211038..1211448 1 NC_017857.1 PFAM: Bacterial type II secretion system protein G; N-terminal methylation 1211448 12847359 Q7A_1203 Methylophaga nitratireducenticrescens N-terminal methylation YP_006295686.1 1211038 D 754476 CDS YP_006295687.1 387127082 12847360 1211464..1214313 1 NC_017857.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1214313 12847360 Q7A_1204 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295687.1 1211464 D 754476 CDS YP_006295688.1 387127083 12847361 complement(1214310..1215533) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 1215533 12847361 Q7A_1205 Methylophaga nitratireducenticrescens RNA polymerase YP_006295688.1 1214310 R 754476 CDS YP_006295689.1 387127084 12847362 complement(1216152..1216814) 1 NC_017857.1 PFAM: NmrA-like family; NAD-dependent epimerase/dehydratase 1216814 12847362 Q7A_1206 Methylophaga nitratireducenticrescens NAD-dependent epimerase/dehydratase YP_006295689.1 1216152 R 754476 CDS YP_006295690.1 387127085 12847363 complement(1216998..1217588) 1 NC_017857.1 hypothetical protein 1217588 12847363 Q7A_1207 Methylophaga nitratireducenticrescens hypothetical protein YP_006295690.1 1216998 R 754476 CDS YP_006295691.1 387127086 12847364 complement(1217650..1218894) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; permease 1218894 12847364 Q7A_1208 Methylophaga nitratireducenticrescens permease YP_006295691.1 1217650 R 754476 CDS YP_006295692.1 387127087 12847365 complement(1219142..1219534) 1 NC_017857.1 hypothetical protein 1219534 12847365 Q7A_1209 Methylophaga nitratireducenticrescens hypothetical protein YP_006295692.1 1219142 R 754476 CDS YP_006295693.1 387127088 12847366 complement(1219758..1220456) 1 NC_017857.1 hypothetical protein 1220456 12847366 Q7A_1210 Methylophaga nitratireducenticrescens hypothetical protein YP_006295693.1 1219758 R 754476 CDS YP_006295694.1 387127089 12847367 1220615..1221151 1 NC_017857.1 PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase-like protein 1221151 12847367 Q7A_1211 Methylophaga nitratireducenticrescens phosphoglycerate mutase-like protein YP_006295694.1 1220615 D 754476 CDS YP_006295695.1 387127090 12847368 1221365..1223686 1 NC_017857.1 PFAM: Mechanosensitive ion channel; Putative modulator of DNA gyrase; Potassium efflux system KefA protein 1223686 12847368 Q7A_1212 Methylophaga nitratireducenticrescens Potassium efflux system KefA protein YP_006295695.1 1221365 D 754476 CDS YP_006295696.1 387127091 12847369 complement(1223747..1224061) 1 NC_017857.1 hypothetical protein 1224061 12847369 Q7A_1213 Methylophaga nitratireducenticrescens hypothetical protein YP_006295696.1 1223747 R 754476 CDS YP_006295697.1 387127092 12847370 complement(1224376..1224489) 1 NC_017857.1 hypothetical protein 1224489 12847370 Q7A_1214 Methylophaga nitratireducenticrescens hypothetical protein YP_006295697.1 1224376 R 754476 CDS YP_006295698.1 387127093 12847371 complement(1224467..1224604) 1 NC_017857.1 hypothetical protein 1224604 12847371 Q7A_1215 Methylophaga nitratireducenticrescens hypothetical protein YP_006295698.1 1224467 R 754476 CDS YP_006295699.1 387127094 12847372 1224754..1226136 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase DbpA 1226136 12847372 Q7A_1216 Methylophaga nitratireducenticrescens ATP-dependent RNA helicase DbpA YP_006295699.1 1224754 D 754476 CDS YP_006295700.1 387127095 12847373 1226204..1227142 1 NC_017857.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; hypothetical protein 1227142 12847373 Q7A_1217 Methylophaga nitratireducenticrescens hypothetical protein YP_006295700.1 1226204 D 754476 CDS YP_006295701.1 387127096 12847374 complement(1227139..1227837) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1227837 12847374 Q7A_1218 Methylophaga nitratireducenticrescens Zn-dependent hydrolase YP_006295701.1 1227139 R 754476 CDS YP_006295702.1 387127097 12847375 complement(1227849..1228673) 1 NC_017857.1 PFAM: Sulfite exporter TauE/SafE; permease 1228673 12847375 Q7A_1219 Methylophaga nitratireducenticrescens permease YP_006295702.1 1227849 R 754476 CDS YP_006295703.1 387127098 12847376 complement(1228679..1228981) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2892); hypothetical protein 1228981 12847376 Q7A_1220 Methylophaga nitratireducenticrescens hypothetical protein YP_006295703.1 1228679 R 754476 CDS YP_006295704.1 387127099 12847377 complement(1229203..1229553) 1 NC_017857.1 PFAM: Bacterial regulatory protein, arsR family; transcriptional regulator 1229553 12847377 Q7A_1221 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295704.1 1229203 R 754476 CDS YP_006295705.1 387127100 12847378 complement(1229719..1230213) 1 NC_017857.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1230213 12847378 Q7A_1222 Methylophaga nitratireducenticrescens YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_006295705.1 1229719 R 754476 CDS YP_006295706.1 387127101 12847379 complement(1230271..1230825) 1 NC_017857.1 PFAM: Uncharacterized protein family UPF0016; transmembrane protein 1230825 12847379 Q7A_1223 Methylophaga nitratireducenticrescens transmembrane protein YP_006295706.1 1230271 R 754476 CDS YP_006295707.1 387127102 12847380 complement(1231090..1231590) 1 NC_017857.1 FIG01181932; hypothetical protein 1231590 12847380 Q7A_1224 Methylophaga nitratireducenticrescens hypothetical protein YP_006295707.1 1231090 R 754476 CDS YP_006295708.1 387127103 12847381 complement(1231583..1232320) 1 NC_017857.1 PFAM: ThiF family; EC-YgdL-like protein 1232320 12847381 Q7A_1225 Methylophaga nitratireducenticrescens EC-YgdL-like protein YP_006295708.1 1231583 R 754476 CDS YP_006295709.1 387127104 12847382 complement(1232441..1234489) 1 NC_017857.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase 1234489 12847382 Q7A_1226 Methylophaga nitratireducenticrescens transglutaminase YP_006295709.1 1232441 R 754476 CDS YP_006295710.1 387127105 12847383 complement(1234479..1235441) 1 NC_017857.1 PFAM: Protein of unknown function DUF58; hypothetical protein 1235441 12847383 Q7A_1227 Methylophaga nitratireducenticrescens hypothetical protein YP_006295710.1 1234479 R 754476 CDS YP_006295711.1 387127106 12847384 complement(1235441..1236352) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase 1236352 12847384 Q7A_1228 Methylophaga nitratireducenticrescens moxR-like ATPase YP_006295711.1 1235441 R 754476 CDS YP_006295712.1 387127107 12847385 1236447..1236740 1 NC_017857.1 hypothetical protein 1236740 12847385 Q7A_1229 Methylophaga nitratireducenticrescens hypothetical protein YP_006295712.1 1236447 D 754476 CDS YP_006295713.1 387127108 12847386 complement(1236741..1237505) 1 NC_017857.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 1237505 12847386 Q7A_1230 Methylophaga nitratireducenticrescens deoxyribonuclease YP_006295713.1 1236741 R 754476 CDS YP_006295714.1 387127109 12847387 1237540..1238001 1 NC_017857.1 hypothetical protein 1238001 12847387 Q7A_1231 Methylophaga nitratireducenticrescens hypothetical protein YP_006295714.1 1237540 D 754476 CDS YP_006295715.1 387127110 12847388 complement(1238006..1239676) 1 NC_017857.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 1239676 12847388 Q7A_1232 Methylophaga nitratireducenticrescens gamma-glutamyltranspeptidase YP_006295715.1 1238006 R 754476 CDS YP_006295716.1 387127111 12847389 complement(1239673..1240671) 1 NC_017857.1 PFAM: Rhodanese-like domain; hypothetical protein 1240671 12847389 Q7A_1233 Methylophaga nitratireducenticrescens hypothetical protein YP_006295716.1 1239673 R 754476 CDS YP_006295717.1 387127112 12847390 1240800..1241213 1 NC_017857.1 hypothetical protein 1241213 12847390 Q7A_1234 Methylophaga nitratireducenticrescens hypothetical protein YP_006295717.1 1240800 D 754476 CDS YP_006295718.1 387127113 12847391 complement(1241215..1241793) 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF882); hypothetical protein 1241793 12847391 Q7A_1235 Methylophaga nitratireducenticrescens hypothetical protein YP_006295718.1 1241215 R 754476 CDS YP_006295719.1 387127114 12847392 complement(1241864..1242826) 1 NC_017857.1 PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 1242826 12847392 Q7A_1236 Methylophaga nitratireducenticrescens Fe3+-siderophore ABC transporter permease YP_006295719.1 1241864 R 754476 CDS YP_006295720.1 387127115 12847393 complement(1242823..1243596) 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATPase 1243596 12847393 Q7A_1237 Methylophaga nitratireducenticrescens ABC transporter ATPase YP_006295720.1 1242823 R 754476 CDS YP_006295721.1 387127116 12847394 complement(1243589..1244506) 1 NC_017857.1 PFAM: Periplasmic binding protein; Vitamin B12 ABC transporter, B12-binding component BtuF 1244506 12847394 Q7A_1238 Methylophaga nitratireducenticrescens Vitamin B12 ABC transporter, B12-binding component BtuF YP_006295721.1 1243589 R 754476 CDS YP_006295722.1 387127117 12847395 1244573..1245109 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 1245109 12847395 Q7A_1239 Methylophaga nitratireducenticrescens hypoxanthine-guanine phosphoribosyltransferase YP_006295722.1 1244573 D 754476 CDS YP_006295723.1 387127118 12847396 1245106..1245840 1 NC_017857.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase 1245840 12847396 Q7A_1240 Methylophaga nitratireducenticrescens 5'-methylthioadenosine phosphorylase YP_006295723.1 1245106 D 754476 CDS YP_006295724.1 387127119 12847397 complement(1245824..1246459) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2803); hypothetical protein 1246459 12847397 Q7A_1241 Methylophaga nitratireducenticrescens hypothetical protein YP_006295724.1 1245824 R 754476 CDS YP_006295725.1 387127120 12847398 1246589..1247512 1 NC_017857.1 PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit YbbK-like protein 1247512 12847398 Q7A_1242 Methylophaga nitratireducenticrescens stomatin/prohibitin-family membrane protease subunit YbbK-like protein YP_006295725.1 1246589 D 754476 CDS YP_006295726.1 387127121 12847399 1247514..1247954 1 NC_017857.1 PFAM: NfeD-like; activity regulator of membrane protease YbbK-like protein 1247954 12847399 Q7A_1243 Methylophaga nitratireducenticrescens activity regulator of membrane protease YbbK-like protein YP_006295726.1 1247514 D 754476 CDS YP_006295727.1 387127122 12847400 1247957..1248556 1 NC_017857.1 PFAM: Phosphoglycerate mutase family; alpha-ribazole-5'-phosphate phosphatase 1248556 12847400 Q7A_1244 Methylophaga nitratireducenticrescens alpha-ribazole-5'-phosphate phosphatase YP_006295727.1 1247957 D 754476 CDS YP_006295728.1 387127123 12847401 1248553..1249731 1 NC_017857.1 PFAM: Cupin superfamily protein; hypothetical protein 1249731 12847401 Q7A_1245 Methylophaga nitratireducenticrescens hypothetical protein YP_006295728.1 1248553 D 754476 CDS YP_006295729.1 387127124 12847402 complement(1249735..1250247) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1451); Zn-finger containing NTP pyrophosphohydrolase 1250247 12847402 Q7A_1246 Methylophaga nitratireducenticrescens Zn-finger containing NTP pyrophosphohydrolase YP_006295729.1 1249735 R 754476 CDS YP_006295730.1 387127125 12847403 1250318..1250803 1 NC_017857.1 PFAM: Disulfide bond formation protein DsbB; periplasmic thiol:disulfide oxidoreductase DsbB 1250803 12847403 Q7A_1247 Methylophaga nitratireducenticrescens periplasmic thiol:disulfide oxidoreductase DsbB YP_006295730.1 1250318 D 754476 CDS YP_006295731.1 387127126 12847404 complement(1250852..1251070) 1 NC_017857.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 1251070 12847404 Q7A_1248 Methylophaga nitratireducenticrescens translation initiation factor 1 YP_006295731.1 1250852 R 754476 CDS YP_006295732.1 387127127 12847405 complement(1251119..1251832) 1 NC_017857.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus; Arginine-tRNA-protein transferase 1251832 12847405 Q7A_1249 Methylophaga nitratireducenticrescens Arginine-tRNA-protein transferase YP_006295732.1 1251119 R 754476 CDS YP_006295733.1 387127128 12847406 complement(1251822..1252448) 1 NC_017857.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 1252448 12847406 Q7A_1250 Methylophaga nitratireducenticrescens leucyl/phenylalanyl-tRNA--protein transferase YP_006295733.1 1251822 R 754476 CDS YP_006295734.1 387127129 12847407 complement(1252547..1253725) 1 NC_017857.1 PFAM: HDOD domain; signal transduction protein 1253725 12847407 Q7A_1251 Methylophaga nitratireducenticrescens signal transduction protein YP_006295734.1 1252547 R 754476 CDS YP_006295735.1 387127130 12847408 complement(1253756..1254355) 1 NC_017857.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; Recombination protein RecR 1254355 12847408 Q7A_1252 Methylophaga nitratireducenticrescens Recombination protein RecR YP_006295735.1 1253756 R 754476 CDS YP_006295736.1 387127131 12847409 complement(1254363..1254671) 1 NC_017857.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein 1254671 12847409 Q7A_1253 Methylophaga nitratireducenticrescens DNA-binding protein YP_006295736.1 1254363 R 754476 CDS YP_006295737.1 387127132 12847410 complement(1254690..1256480) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 1256480 12847410 Q7A_1254 Methylophaga nitratireducenticrescens DNA polymerase III subunits gamma and tau YP_006295737.1 1254690 R 754476 CDS YP_006295738.1 387127133 12847412 complement(1257021..1257860) 1 NC_017857.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Pantothenate kinase type III, CoaX-like protein 1257860 12847412 Q7A_1256 Methylophaga nitratireducenticrescens Pantothenate kinase type III, CoaX-like protein YP_006295738.1 1257021 R 754476 CDS YP_006295739.1 387127134 12847413 complement(1257857..1258660) 1 NC_017857.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--protein ligase 1258660 12847413 Q7A_1257 Methylophaga nitratireducenticrescens biotin--protein ligase YP_006295739.1 1257857 R 754476 CDS YP_006295740.1 387127135 12847414 complement(1258753..1258977) 1 NC_017857.1 hypothetical protein 1258977 12847414 Q7A_1258 Methylophaga nitratireducenticrescens hypothetical protein YP_006295740.1 1258753 R 754476 CDS YP_006295741.1 387127136 12847415 complement(1259025..1259390) 1 NC_017857.1 PFAM: Predicted membrane protein (DUF2069); hypothetical protein 1259390 12847415 Q7A_1259 Methylophaga nitratireducenticrescens hypothetical protein YP_006295741.1 1259025 R 754476 CDS YP_006295742.1 387127137 12847416 complement(1259387..1259929) 1 NC_017857.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; flavoprotein WrbA 1259929 12847416 Q7A_1260 Methylophaga nitratireducenticrescens flavoprotein WrbA YP_006295742.1 1259387 R 754476 CDS YP_006295743.1 387127138 12847417 complement(1259990..1260340) 1 NC_017857.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; arsenate reductase (glutaredoxin); Arsenate reductase 1260340 12847417 Q7A_1261 Methylophaga nitratireducenticrescens Arsenate reductase YP_006295743.1 1259990 R 754476 CDS YP_006295744.1 387127139 12847418 complement(1260337..1261518) 1 NC_017857.1 Heat shock protein YciM, precursor 1261518 12847418 Q7A_1262 Methylophaga nitratireducenticrescens Heat shock protein YciM, precursor YP_006295744.1 1260337 R 754476 CDS YP_006295745.1 387127140 12847419 complement(1261527..1261823) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1049); hypothetical protein 1261823 12847419 Q7A_1263 Methylophaga nitratireducenticrescens hypothetical protein YP_006295745.1 1261527 R 754476 CDS YP_006295746.1 387127141 12847420 1261976..1262299 1 NC_017857.1 PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain; 4Fe-4S ferredoxin 1262299 12847420 Q7A_1264 Methylophaga nitratireducenticrescens 4Fe-4S ferredoxin YP_006295746.1 1261976 D 754476 CDS YP_006295747.1 387127142 12847421 complement(1262359..1263219) 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH; RNA polymerase sigma factor RpoH 1263219 12847421 Q7A_1265 Methylophaga nitratireducenticrescens RNA polymerase sigma factor RpoH YP_006295747.1 1262359 R 754476 CDS YP_006295748.1 387127143 12847422 complement(1263323..1264249) 1 NC_017857.1 PFAM: Predicted permease; cell division protein FtsX 1264249 12847422 Q7A_1266 Methylophaga nitratireducenticrescens cell division protein FtsX YP_006295748.1 1263323 R 754476 CDS YP_006295749.1 387127144 12847423 complement(1264246..1264908) 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein; cell division transporter ATP-binding protein FtsE 1264908 12847423 Q7A_1267 Methylophaga nitratireducenticrescens cell division transporter ATP-binding protein FtsE YP_006295749.1 1264246 R 754476 CDS YP_006295750.1 387127145 12847424 complement(1264905..1265969) 1 NC_017857.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; Signal recognition particle receptor protein FtsY 1265969 12847424 Q7A_1268 Methylophaga nitratireducenticrescens Signal recognition particle receptor protein FtsY YP_006295750.1 1264905 R 754476 CDS YP_006295751.1 387127146 12847425 1266033..1267394 1 NC_017857.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase 1267394 12847425 Q7A_1269 Methylophaga nitratireducenticrescens peptidase YP_006295751.1 1266033 D 754476 CDS YP_006295752.1 387127147 12847426 1267384..1268685 1 NC_017857.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Zinc protease 1268685 12847426 Q7A_1270 Methylophaga nitratireducenticrescens Zinc protease YP_006295752.1 1267384 D 754476 CDS YP_006295753.1 387127148 12847427 1268753..1269241 1 NC_017857.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; ribosomal RNA small subunit methyltransferase D 1269241 12847427 Q7A_1271 Methylophaga nitratireducenticrescens ribosomal RNA small subunit methyltransferase D YP_006295753.1 1268753 D 754476 CDS YP_006295754.1 387127149 12847428 1269251..1269748 1 NC_017857.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; phosphopantetheine adenylyltransferase 1269748 12847428 Q7A_1272 Methylophaga nitratireducenticrescens phosphopantetheine adenylyltransferase YP_006295754.1 1269251 D 754476 CDS YP_006295755.1 387127150 12847429 1269797..1270051 1 NC_017857.1 4Fe-4S ferredoxin 1270051 12847429 Q7A_1273 Methylophaga nitratireducenticrescens 4Fe-4S ferredoxin YP_006295755.1 1269797 D 754476 CDS YP_006295756.1 387127151 12847430 1270126..1270512 1 NC_017857.1 PFAM: H-NS histone family; DNA-binding protein H-NS 1270512 12847430 Q7A_1274 Methylophaga nitratireducenticrescens DNA-binding protein H-NS YP_006295756.1 1270126 D 754476 CDS YP_006295757.1 387127152 12847431 1270673..1273126 1 NC_017857.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 1273126 12847431 Q7A_1275 Methylophaga nitratireducenticrescens leucyl-tRNA synthetase YP_006295757.1 1270673 D 754476 CDS YP_006295758.1 387127153 12847432 1273145..1273630 1 NC_017857.1 PFAM: Rare lipoprotein B family; LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) 1273630 12847432 Q7A_1276 Methylophaga nitratireducenticrescens LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) YP_006295758.1 1273145 D 754476 CDS YP_006295759.1 387127154 12847433 1273636..1274667 1 NC_017857.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1274667 12847433 Q7A_1277 Methylophaga nitratireducenticrescens DNA polymerase III subunit delta YP_006295759.1 1273636 D 754476 CDS YP_006295760.1 387127155 12847434 1274697..1275953 1 NC_017857.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1275953 12847434 Q7A_1278 Methylophaga nitratireducenticrescens gamma-glutamyl phosphate reductase YP_006295760.1 1274697 D 754476 CDS YP_006295761.1 387127156 12847435 1275928..1276593 1 NC_017857.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; bacterial NadD family; nicotinate-nucleotide adenylyltransferase 1276593 12847435 Q7A_1279 Methylophaga nitratireducenticrescens nicotinate-nucleotide adenylyltransferase YP_006295761.1 1275928 D 754476 CDS YP_006295762.1 387127157 12847436 1276600..1277451 1 NC_017857.1 PFAM: DUF218 domain; hypothetical protein 1277451 12847436 Q7A_1280 Methylophaga nitratireducenticrescens hypothetical protein YP_006295762.1 1276600 D 754476 CDS YP_006295763.1 387127158 12847437 1277485..1277841 1 NC_017857.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; Iojap-like protein 1277841 12847437 Q7A_1281 Methylophaga nitratireducenticrescens Iojap-like protein YP_006295763.1 1277485 D 754476 CDS YP_006295764.1 387127159 12847438 1277838..1278308 1 NC_017857.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; 50S m3Psi1915 methyltransferase 1278308 12847438 Q7A_1282 Methylophaga nitratireducenticrescens 50S m3Psi1915 methyltransferase YP_006295764.1 1277838 D 754476 CDS YP_006295765.1 387127160 12847439 1278305..1278892 1 NC_017857.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf 1278892 12847439 Q7A_1283 Methylophaga nitratireducenticrescens Septum formation protein Maf YP_006295765.1 1278305 D 754476 CDS YP_006295766.1 387127161 12847440 1278882..1280354 1 NC_017857.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease G 1280354 12847440 Q7A_1284 Methylophaga nitratireducenticrescens ribonuclease G YP_006295766.1 1278882 D 754476 CDS YP_006295767.1 387127162 12847441 1280357..1284166 1 NC_017857.1 TIGRFAM: TIGR02099 family protein; hypothetical protein 1284166 12847441 Q7A_1285 Methylophaga nitratireducenticrescens hypothetical protein YP_006295767.1 1280357 D 754476 CDS YP_006295768.1 387127163 12847442 1284208..1285650 1 NC_017857.1 PFAM: Putative modulator of DNA gyrase; TldD-like protein 1285650 12847442 Q7A_1286 Methylophaga nitratireducenticrescens TldD-like protein YP_006295768.1 1284208 D 754476 CDS YP_006295769.1 387127164 12847444 1286698..1286925 1 NC_017857.1 PFAM: SirA-like protein; tRNA 5-methylaminomethyl-2-thiouridine synthase TusA 1286925 12847444 Q7A_1289 Methylophaga nitratireducenticrescens tRNA 5-methylaminomethyl-2-thiouridine synthase TusA YP_006295769.1 1286698 D 754476 CDS YP_006295770.1 387127165 12847445 1287099..1288508 1 NC_017857.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase 1288508 12847445 Q7A_1290 Methylophaga nitratireducenticrescens glutamine synthetase YP_006295770.1 1287099 D 754476 CDS YP_006295771.1 387127166 12847446 1288623..1289240 1 NC_017857.1 hypothetical protein 1289240 12847446 Q7A_1291 Methylophaga nitratireducenticrescens hypothetical protein YP_006295771.1 1288623 D 754476 CDS YP_006295772.1 387127167 12847447 1289418..1290476 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; nitrogen regulation protein NR(II) 1290476 12847447 Q7A_1292 Methylophaga nitratireducenticrescens nitrogen regulation protein NR(II) YP_006295772.1 1289418 D 754476 CDS YP_006295773.1 387127168 12847448 1290481..1291884 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I); nitrogen regulation protein NR(I) 1291884 12847448 Q7A_1293 Methylophaga nitratireducenticrescens nitrogen regulation protein NR(I) YP_006295773.1 1290481 D 754476 CDS YP_006295774.1 387127169 12847450 1292107..1292553 1 NC_017857.1 PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 1292553 12847450 Q7A_1295 Methylophaga nitratireducenticrescens hypothetical protein YP_006295774.1 1292107 D 754476 CDS YP_006295775.1 387127170 12847451 1292629..1294143 1 NC_017857.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; transcription termination protein NusA 1294143 12847451 Q7A_1296 Methylophaga nitratireducenticrescens transcription termination protein NusA YP_006295775.1 1292629 D 754476 CDS YP_006295776.1 387127171 12847452 1294147..1296942 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 1296942 12847452 Q7A_1297 Methylophaga nitratireducenticrescens translation initiation factor 2 YP_006295776.1 1294147 D 754476 CDS YP_006295777.1 387127172 12847453 1296942..1297343 1 NC_017857.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 1297343 12847453 Q7A_1298 Methylophaga nitratireducenticrescens ribosome-binding factor A YP_006295777.1 1296942 D 754476 CDS YP_006295778.1 387127173 12847454 1297353..1298282 1 NC_017857.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 1298282 12847454 Q7A_1299 Methylophaga nitratireducenticrescens tRNA pseudouridine synthase B YP_006295778.1 1297353 D 754476 CDS YP_006295779.1 387127174 12847455 1298412..1298681 1 NC_017857.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 1298681 12847455 Q7A_1300 Methylophaga nitratireducenticrescens 30S ribosomal protein S15 YP_006295779.1 1298412 D 754476 CDS YP_006295780.1 387127175 12847456 1298872..1300965 1 NC_017857.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase 1300965 12847456 Q7A_1301 Methylophaga nitratireducenticrescens Polyribonucleotide nucleotidyltransferase YP_006295780.1 1298872 D 754476 CDS YP_006295781.1 387127176 12847457 1301026..1301793 1 NC_017857.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein 1301793 12847457 Q7A_1302 Methylophaga nitratireducenticrescens molybdenum ABC transporter substrate-binding protein YP_006295781.1 1301026 D 754476 CDS YP_006295782.1 387127177 12847458 1301797..1302459 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdenum transport system permease ModB 1302459 12847458 Q7A_1303 Methylophaga nitratireducenticrescens molybdenum transport system permease ModB YP_006295782.1 1301797 D 754476 CDS YP_006295783.1 387127178 12847459 1302461..1303528 1 NC_017857.1 PFAM: ABC transporter; ABC transporter-like protein 1303528 12847459 Q7A_1304 Methylophaga nitratireducenticrescens ABC transporter-like protein YP_006295783.1 1302461 D 754476 CDS YP_006295784.1 387127179 12847460 1303651..1304346 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; Ferric siderophore transport system, biopolymer transport protein ExbB 1304346 12847460 Q7A_1305 Methylophaga nitratireducenticrescens Ferric siderophore transport system, biopolymer transport protein ExbB YP_006295784.1 1303651 D 754476 CDS YP_006295785.1 387127180 12847461 1304336..1304734 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1304734 12847461 Q7A_1306 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006295785.1 1304336 D 754476 CDS YP_006295786.1 387127181 12847462 1304731..1305162 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1305162 12847462 Q7A_1307 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006295786.1 1304731 D 754476 CDS YP_006295787.1 387127182 12847463 1305197..1305976 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB 1305976 12847463 Q7A_1308 Methylophaga nitratireducenticrescens TonB YP_006295787.1 1305197 D 754476 CDS YP_006295788.1 387127183 12847464 1306038..1306805 1 NC_017857.1 PFAM: Protein of unknown function (DUF815); hypothetical protein 1306805 12847464 Q7A_1309 Methylophaga nitratireducenticrescens hypothetical protein YP_006295788.1 1306038 D 754476 CDS YP_006295789.1 387127184 12847465 complement(1306819..1308114) 1 NC_017857.1 PFAM: His Kinase A (phosphoacceptor) domain; two-component sensor 1308114 12847465 Q7A_1310 Methylophaga nitratireducenticrescens two-component sensor YP_006295789.1 1306819 R 754476 CDS YP_006295790.1 387127185 12847466 complement(1308104..1308781) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component response regulator 1308781 12847466 Q7A_1311 Methylophaga nitratireducenticrescens two-component response regulator YP_006295790.1 1308104 R 754476 CDS YP_006295791.1 387127186 12847468 complement(1311930..1313099) 1 NC_017857.1 TIGRFAM: RND family efflux transporter, MFP subunit; membrane fusion protein 1313099 12847468 Q7A_1314 Methylophaga nitratireducenticrescens membrane fusion protein YP_006295791.1 1311930 R 754476 CDS YP_006295792.1 387127187 12847469 complement(1313096..1314466) 1 NC_017857.1 PFAM: Outer membrane efflux protein; RND efflux system, outer membrane lipoprotein 1314466 12847469 Q7A_1315 Methylophaga nitratireducenticrescens RND efflux system, outer membrane lipoprotein YP_006295792.1 1313096 R 754476 CDS YP_006295793.1 387127188 12847470 complement(1314539..1315759) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; multidrug resistance transporter 1315759 12847470 Q7A_1316 Methylophaga nitratireducenticrescens multidrug resistance transporter YP_006295793.1 1314539 R 754476 CDS YP_006295794.1 387127189 12847471 1316039..1316215 1 NC_017857.1 hypothetical protein 1316215 12847471 Q7A_1317 Methylophaga nitratireducenticrescens hypothetical protein YP_006295794.1 1316039 D 754476 CDS YP_006295795.1 387127190 12847472 complement(1316303..1317598) 1 NC_017857.1 PFAM: Mechanosensitive ion channel; Small-conductance mechanosensitive channel 1317598 12847472 Q7A_1318 Methylophaga nitratireducenticrescens Small-conductance mechanosensitive channel YP_006295795.1 1316303 R 754476 CDS YP_006295796.1 387127191 12847473 1317964..1319454 1 NC_017857.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease 1319454 12847473 Q7A_1319 Methylophaga nitratireducenticrescens sulfate permease YP_006295796.1 1317964 D 754476 CDS YP_006295797.1 387127192 12847474 1319475..1320335 1 NC_017857.1 PFAM: Universal stress protein family; Universal stress protein 1320335 12847474 Q7A_1320 Methylophaga nitratireducenticrescens Universal stress protein YP_006295797.1 1319475 D 754476 CDS YP_006295798.1 387127193 12847475 1320335..1320700 1 NC_017857.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; DnaK suppressor protein 1320700 12847475 Q7A_1321 Methylophaga nitratireducenticrescens DnaK suppressor protein YP_006295798.1 1320335 D 754476 CDS YP_006295799.1 387127194 12847476 1320779..1322836 1 NC_017857.1 PFAM: GAF domain; GGDEF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1322836 12847476 Q7A_1322 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295799.1 1320779 D 754476 CDS YP_006295800.1 387127195 12847477 1323470..1324309 1 NC_017857.1 PFAM: Protein of unknwon function (DUF2893); Ynd-like protein 1324309 12847477 Q7A_1323 Methylophaga nitratireducenticrescens Ynd-like protein YP_006295800.1 1323470 D 754476 CDS YP_006295801.1 387127196 12847478 1324312..1325226 1 NC_017857.1 PFAM: Domain of unknown function (DUF1814); Ync-like protein 1325226 12847478 Q7A_1324 Methylophaga nitratireducenticrescens Ync-like protein YP_006295801.1 1324312 D 754476 CDS YP_006295802.1 387127197 12847479 1325390..1326976 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 1326976 12847479 Q7A_1325 Methylophaga nitratireducenticrescens peptide chain release factor 3 YP_006295802.1 1325390 D 754476 CDS YP_006295803.1 387127198 12847480 1327041..1327490 1 NC_017857.1 PFAM: CBS domain; inosine-5'-monophosphate dehydrogenase 1327490 12847480 Q7A_1326 Methylophaga nitratireducenticrescens inosine-5'-monophosphate dehydrogenase YP_006295803.1 1327041 D 754476 CDS YP_006295804.1 387127199 12847481 complement(1327569..1327856) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3579); phnO-like protein 1327856 12847481 Q7A_1327 Methylophaga nitratireducenticrescens phnO-like protein YP_006295804.1 1327569 R 754476 CDS YP_006295805.1 387127200 12847482 1328443..1331244 1 NC_017857.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1331244 12847482 Q7A_1328 Methylophaga nitratireducenticrescens isoleucyl-tRNA synthetase YP_006295805.1 1328443 D 754476 CDS YP_006295806.1 387127201 12847483 1331255..1331722 1 NC_017857.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 1331722 12847483 Q7A_1329 Methylophaga nitratireducenticrescens lipoprotein signal peptidase YP_006295806.1 1331255 D 754476 CDS YP_006295807.1 387127202 12847484 1331719..1332816 1 NC_017857.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Biosynthetic Aromatic amino acid aminotransferase beta 1332816 12847484 Q7A_1330 Methylophaga nitratireducenticrescens Biosynthetic Aromatic amino acid aminotransferase beta YP_006295807.1 1331719 D 754476 CDS YP_006295808.1 387127203 12847485 1332813..1333700 1 NC_017857.1 PFAM: Prephenate dehydrogenase; cyclohexadienyl dehydrogenase 1333700 12847485 Q7A_1331 Methylophaga nitratireducenticrescens cyclohexadienyl dehydrogenase YP_006295808.1 1332813 D 754476 CDS YP_006295809.1 387127204 12847486 1333720..1335039 1 NC_017857.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; cyclohexadienyl dehydrogenase / 5-Enolpyruvylshikimate-3-phosphate synthase 1335039 12847486 Q7A_1332 Methylophaga nitratireducenticrescens cyclohexadienyl dehydrogenase / 5-Enolpyruvylshikimate-3-phosphate synthase YP_006295809.1 1333720 D 754476 CDS YP_006295810.1 387127205 12847487 1335032..1335694 1 NC_017857.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 1335694 12847487 Q7A_1333 Methylophaga nitratireducenticrescens cytidylate kinase YP_006295810.1 1335032 D 754476 CDS YP_006295811.1 387127206 12847488 1335804..1337477 1 NC_017857.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 1337477 12847488 Q7A_1334 Methylophaga nitratireducenticrescens 30S ribosomal protein S1 YP_006295811.1 1335804 D 754476 CDS YP_006295812.1 387127207 12847489 1337590..1337880 1 NC_017857.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; integration host factor subunit beta 1337880 12847489 Q7A_1335 Methylophaga nitratireducenticrescens integration host factor subunit beta YP_006295812.1 1337590 D 754476 CDS YP_006295813.1 387127208 12847490 1337887..1338273 1 NC_017857.1 PFAM: Protein of unknown function (DUF498/DUF598); hypothetical protein 1338273 12847490 Q7A_1336 Methylophaga nitratireducenticrescens hypothetical protein YP_006295813.1 1337887 D 754476 CDS YP_006295814.1 387127209 12847491 1339205..1340413 1 NC_017857.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase subunit CcoN 1340413 12847491 Q7A_1337 Methylophaga nitratireducenticrescens cytochrome c oxidase subunit CcoN YP_006295814.1 1339205 D 754476 CDS YP_006295815.1 387127210 12847492 1340424..1341101 1 NC_017857.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase subunit CcoO 1341101 12847492 Q7A_1338 Methylophaga nitratireducenticrescens cytochrome c oxidase subunit CcoO YP_006295815.1 1340424 D 754476 CDS YP_006295816.1 387127211 12847493 1341094..1341303 1 NC_017857.1 PFAM: Cbb3-type cytochrome oxidase component FixQ; Cbb3-type cytochrome oxidase component FixQ 1341303 12847493 Q7A_1339 Methylophaga nitratireducenticrescens Cbb3-type cytochrome oxidase component FixQ YP_006295816.1 1341094 D 754476 CDS YP_006295817.1 387127212 12847494 1341296..1342228 1 NC_017857.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase subunit CcoP 1342228 12847494 Q7A_1340 Methylophaga nitratireducenticrescens cytochrome c oxidase subunit CcoP YP_006295817.1 1341296 D 754476 CDS YP_006295818.1 387127213 12847495 1342268..1342387 1 NC_017857.1 hypothetical protein 1342387 12847495 Q7A_1341 Methylophaga nitratireducenticrescens hypothetical protein YP_006295818.1 1342268 D 754476 CDS YP_006295819.1 387127214 12847496 1342789..1343292 1 NC_017857.1 PFAM: FixH; hypothetical protein 1343292 12847496 Q7A_1342 Methylophaga nitratireducenticrescens hypothetical protein YP_006295819.1 1342789 D 754476 CDS YP_006295820.1 387127215 12847498 1345783..1345992 1 NC_017857.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; type cbb3 cytochrome oxidase biogenesis protein CcoS 1345992 12847498 Q7A_1345 Methylophaga nitratireducenticrescens type cbb3 cytochrome oxidase biogenesis protein CcoS YP_006295820.1 1345783 D 754476 CDS YP_006295821.1 387127216 12847499 1346021..1347148 1 NC_017857.1 PFAM: Receptor family ligand binding region; leucine/isoleucine/valine-binding protein precursor 1347148 12847499 Q7A_1346 Methylophaga nitratireducenticrescens leucine/isoleucine/valine-binding protein precursor YP_006295821.1 1346021 D 754476 CDS YP_006295822.1 387127217 12847500 1347173..1350532 1 NC_017857.1 PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1350532 12847500 Q7A_1347 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295822.1 1347173 D 754476 CDS YP_006295823.1 387127218 12847501 complement(1350511..1351020) 1 NC_017857.1 membrane-bound lytic murein transglycosylase B 1351020 12847501 Q7A_1348 Methylophaga nitratireducenticrescens membrane-bound lytic murein transglycosylase B YP_006295823.1 1350511 R 754476 CDS YP_006295824.1 387127219 12847502 complement(1351152..1351595) 1 NC_017857.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 1351595 12847502 Q7A_1349 Methylophaga nitratireducenticrescens D-tyrosyl-tRNA(Tyr) deacylase YP_006295824.1 1351152 R 754476 CDS YP_006295825.1 387127220 12847503 complement(1351592..1352584) 1 NC_017857.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; proline iminopeptidase 1352584 12847503 Q7A_1350 Methylophaga nitratireducenticrescens proline iminopeptidase YP_006295825.1 1351592 R 754476 CDS YP_006295826.1 387127221 12847504 1352698..1353861 1 NC_017857.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta 1353861 12847504 Q7A_1351 Methylophaga nitratireducenticrescens succinyl-CoA ligase (ADP-forming) subunit beta YP_006295826.1 1352698 D 754476 CDS YP_006295827.1 387127222 12847505 1353869..1354741 1 NC_017857.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA ligase (ADP-forming) subunit alpha 1354741 12847505 Q7A_1352 Methylophaga nitratireducenticrescens succinyl-CoA ligase (ADP-forming) subunit alpha YP_006295827.1 1353869 D 754476 CDS YP_006295828.1 387127223 12847506 1354741..1356384 1 NC_017857.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD synthetase glutamine amidotransferase subunit 1356384 12847506 Q7A_1353 Methylophaga nitratireducenticrescens NAD synthetase glutamine amidotransferase subunit YP_006295828.1 1354741 D 754476 CDS YP_006295829.1 387127224 12847507 1356393..1356731 1 NC_017857.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1356731 12847507 Q7A_1354 Methylophaga nitratireducenticrescens nitrogen regulatory protein P-II YP_006295829.1 1356393 D 754476 CDS YP_006295830.1 387127225 12847508 complement(1356753..1357535) 1 NC_017857.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; hypothetical protein 1357535 12847508 Q7A_1355 Methylophaga nitratireducenticrescens hypothetical protein YP_006295830.1 1356753 R 754476 CDS YP_006295831.1 387127226 12847509 1358006..1359169 1 NC_017857.1 PFAM: L,D-transpeptidase catalytic domain; ErfK/YbiS/YcfS/YnhG family protein 1359169 12847509 Q7A_1356 Methylophaga nitratireducenticrescens ErfK/YbiS/YcfS/YnhG family protein YP_006295831.1 1358006 D 754476 CDS YP_006295832.1 387127227 12847510 complement(1359257..1359556) 1 NC_017857.1 lipoprotein 1359556 12847510 Q7A_1357 Methylophaga nitratireducenticrescens lipoprotein YP_006295832.1 1359257 R 754476 CDS YP_006295833.1 387127228 12847511 1359782..1360576 1 NC_017857.1 PFAM: Inositol monophosphatase family; inositol-1-monophosphatase 1360576 12847511 Q7A_1358 Methylophaga nitratireducenticrescens inositol-1-monophosphatase YP_006295833.1 1359782 D 754476 CDS YP_006295834.1 387127229 12847512 1360641..1362473 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA 1362473 12847512 Q7A_1359 Methylophaga nitratireducenticrescens GTP-binding protein TypA/BipA YP_006295834.1 1360641 D 754476 CDS YP_006295835.1 387127230 12847513 1362585..1362803 1 NC_017857.1 hypothetical protein 1362803 12847513 Q7A_1360 Methylophaga nitratireducenticrescens hypothetical protein YP_006295835.1 1362585 D 754476 CDS YP_006295836.1 387127231 12847514 1362803..1364398 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor PilS 1364398 12847514 Q7A_1361 Methylophaga nitratireducenticrescens two-component sensor PilS YP_006295836.1 1362803 D 754476 CDS YP_006295837.1 387127232 12847515 1364395..1365750 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; type IV fimbriae expression regulatory protein PilR 1365750 12847515 Q7A_1362 Methylophaga nitratireducenticrescens type IV fimbriae expression regulatory protein PilR YP_006295837.1 1364395 D 754476 CDS YP_006295838.1 387127233 12847516 complement(1365765..1366673) 1 NC_017857.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ; folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 1366673 12847516 Q7A_1363 Methylophaga nitratireducenticrescens folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress YP_006295838.1 1365765 R 754476 CDS YP_006295839.1 387127234 12847517 1366744..1367187 1 NC_017857.1 hypothetical protein 1367187 12847517 Q7A_1364 Methylophaga nitratireducenticrescens hypothetical protein YP_006295839.1 1366744 D 754476 CDS YP_006295840.1 387127235 12847518 complement(1367162..1368763) 1 NC_017857.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 1368763 12847518 Q7A_1365 Methylophaga nitratireducenticrescens L-aspartate oxidase YP_006295840.1 1367162 R 754476 CDS YP_006295841.1 387127236 12847519 1368892..1369467 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 1369467 12847519 Q7A_1366 Methylophaga nitratireducenticrescens RNA polymerase sigma factor RpoE YP_006295841.1 1368892 D 754476 CDS YP_006295842.1 387127237 12847520 1369470..1370039 1 NC_017857.1 PFAM: Anti sigma-E protein RseA, N-terminal domain; Anti sigma-E protein RseA 1370039 12847520 Q7A_1367 Methylophaga nitratireducenticrescens Anti sigma-E protein RseA YP_006295842.1 1369470 D 754476 CDS YP_006295843.1 387127238 12847521 1370043..1371023 1 NC_017857.1 PFAM: MucB/RseB family; Sigma factor RpoE negative regulatory protein RseB precursor 1371023 12847521 Q7A_1368 Methylophaga nitratireducenticrescens Sigma factor RpoE negative regulatory protein RseB precursor YP_006295843.1 1370043 D 754476 CDS YP_006295844.1 387127239 12847522 1371020..1371442 1 NC_017857.1 PFAM: Positive regulator of sigma(E), RseC/MucC; Sigma factor RpoE regulatory protein RseC 1371442 12847522 Q7A_1369 Methylophaga nitratireducenticrescens Sigma factor RpoE regulatory protein RseC YP_006295844.1 1371020 D 754476 CDS YP_006295845.1 387127240 12847523 1371442..1372869 1 NC_017857.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Serine protease precursor MucD/AlgY 1372869 12847523 Q7A_1370 Methylophaga nitratireducenticrescens Serine protease precursor MucD/AlgY YP_006295845.1 1371442 D 754476 CDS YP_006295846.1 387127241 12847524 complement(1372839..1372964) 1 NC_017857.1 hypothetical protein 1372964 12847524 Q7A_1371 Methylophaga nitratireducenticrescens hypothetical protein YP_006295846.1 1372839 R 754476 CDS YP_006295847.1 387127242 12847525 1373047..1373751 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 1373751 12847525 Q7A_1372 Methylophaga nitratireducenticrescens Copper-sensing two-component system response regulator CpxR YP_006295847.1 1373047 D 754476 CDS YP_006295848.1 387127243 12847526 1373748..1375091 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1375091 12847526 Q7A_1373 Methylophaga nitratireducenticrescens integral membrane sensor signal transduction histidine kinase YP_006295848.1 1373748 D 754476 CDS YP_006295849.1 387127244 12847527 1375263..1377209 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein 1377209 12847527 Q7A_1374 Methylophaga nitratireducenticrescens TonB-dependent heme/hemoglobin receptor family protein YP_006295849.1 1375263 D 754476 CDS YP_006295850.1 387127245 12847528 complement(1377280..1378647) 1 NC_017857.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 1378647 12847528 Q7A_1375 Methylophaga nitratireducenticrescens multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps YP_006295850.1 1377280 R 754476 CDS YP_006295851.1 387127246 12847529 1378913..1380709 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; translation elongation factor LepA 1380709 12847529 Q7A_1376 Methylophaga nitratireducenticrescens translation elongation factor LepA YP_006295851.1 1378913 D 754476 CDS YP_006295852.1 387127247 12847530 1380723..1381484 1 NC_017857.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Signal peptidase I 1381484 12847530 Q7A_1377 Methylophaga nitratireducenticrescens Signal peptidase I YP_006295852.1 1380723 D 754476 CDS YP_006295853.1 387127248 12847531 1381606..1381992 1 NC_017857.1 hypothetical protein 1381992 12847531 Q7A_1378 Methylophaga nitratireducenticrescens hypothetical protein YP_006295853.1 1381606 D 754476 CDS YP_006295854.1 387127249 12847532 1381989..1382648 1 NC_017857.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; ribonuclease III 1382648 12847532 Q7A_1379 Methylophaga nitratireducenticrescens ribonuclease III YP_006295854.1 1381989 D 754476 CDS YP_006295855.1 387127250 12847533 1382668..1383573 1 NC_017857.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1383573 12847533 Q7A_1380 Methylophaga nitratireducenticrescens GTP-binding protein Era YP_006295855.1 1382668 D 754476 CDS YP_006295856.1 387127251 12847534 1383586..1384305 1 NC_017857.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA recombination and repair protein RecO 1384305 12847534 Q7A_1381 Methylophaga nitratireducenticrescens DNA recombination and repair protein RecO YP_006295856.1 1383586 D 754476 CDS YP_006295857.1 387127252 12847535 1384318..1385049 1 NC_017857.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 1385049 12847535 Q7A_1382 Methylophaga nitratireducenticrescens pyridoxine 5'-phosphate synthase YP_006295857.1 1384318 D 754476 CDS YP_006295858.1 387127253 12847536 1385046..1385426 1 NC_017857.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase; Holo-(acyl-carrier protein) synthase 1385426 12847536 Q7A_1383 Methylophaga nitratireducenticrescens Holo-(acyl-carrier protein) synthase YP_006295858.1 1385046 D 754476 CDS YP_006295859.1 387127254 12847537 1385428..1386315 1 NC_017857.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; cysteine synthase B 1386315 12847537 Q7A_1384 Methylophaga nitratireducenticrescens cysteine synthase B YP_006295859.1 1385428 D 754476 CDS YP_006295860.1 387127255 12847538 1386357..1388372 1 NC_017857.1 hypothetical protein 1388372 12847538 Q7A_1385 Methylophaga nitratireducenticrescens hypothetical protein YP_006295860.1 1386357 D 754476 CDS YP_006295861.1 387127256 12847539 1388384..1388983 1 NC_017857.1 PFAM: Protein of unknown function (DUF1318); hypothetical protein 1388983 12847539 Q7A_1386 Methylophaga nitratireducenticrescens hypothetical protein YP_006295861.1 1388384 D 754476 CDS YP_006295862.1 387127257 12847540 1389065..1390393 1 NC_017857.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; RNA methyltransferase 1390393 12847540 Q7A_1387 Methylophaga nitratireducenticrescens RNA methyltransferase YP_006295862.1 1389065 D 754476 CDS YP_006295863.1 387127258 12847541 1390633..1391220 1 NC_017857.1 TIGRFAM: VPLPA-CTERM protein sorting domain; PEP-CTERM protein sorting domain; hypothetical protein 1391220 12847541 Q7A_1388 Methylophaga nitratireducenticrescens hypothetical protein YP_006295863.1 1390633 D 754476 CDS YP_006295864.1 387127259 12847542 1391303..1392445 1 NC_017857.1 PFAM: DNA alkylation repair enzyme; DNA alkylation repair protein 1392445 12847542 Q7A_1389 Methylophaga nitratireducenticrescens DNA alkylation repair protein YP_006295864.1 1391303 D 754476 CDS YP_006295865.1 387127260 12847543 complement(1392527..1394884) 1 NC_017857.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 1394884 12847543 Q7A_1390 Methylophaga nitratireducenticrescens phosphoenolpyruvate synthase YP_006295865.1 1392527 R 754476 CDS YP_006295866.1 387127261 12847544 complement(1394890..1395780) 1 NC_017857.1 PFAM: Domain of unknown function (DUF299); hypothetical protein 1395780 12847544 Q7A_1391 Methylophaga nitratireducenticrescens hypothetical protein YP_006295866.1 1394890 R 754476 CDS YP_006295867.1 387127262 12847545 1396678..1396803 1 NC_017857.1 hypothetical protein 1396803 12847545 Q7A_1392 Methylophaga nitratireducenticrescens hypothetical protein YP_006295867.1 1396678 D 754476 CDS YP_006295868.1 387127263 12847546 complement(1396881..1397726) 1 NC_017857.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 1397726 12847546 Q7A_1393 Methylophaga nitratireducenticrescens UTP--glucose-1-phosphate uridylyltransferase YP_006295868.1 1396881 R 754476 CDS YP_006295869.1 387127264 12847547 1398049..1398414 1 NC_017857.1 hypothetical protein 1398414 12847547 Q7A_1394 Methylophaga nitratireducenticrescens hypothetical protein YP_006295869.1 1398049 D 754476 CDS YP_006295870.1 387127265 12847548 1398762..1399802 1 NC_017857.1 PFAM: PQQ enzyme repeat; cell surface protein/ lipoprotein 1399802 12847548 Q7A_1395 Methylophaga nitratireducenticrescens cell surface protein/ lipoprotein YP_006295870.1 1398762 D 754476 CDS YP_006295871.1 387127266 12847549 complement(1400035..1400892) 1 NC_017857.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 1400892 12847549 Q7A_1396 Methylophaga nitratireducenticrescens UTP--glucose-1-phosphate uridylyltransferase YP_006295871.1 1400035 R 754476 CDS YP_006295872.1 387127267 12847550 1401140..1402120 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose 4-epimerase 1402120 12847550 Q7A_1397 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006295872.1 1401140 D 754476 CDS YP_006295873.1 387127268 12847551 1402136..1403536 1 NC_017857.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 1403536 12847551 Q7A_1398 Methylophaga nitratireducenticrescens mannose-1-phosphate guanylyltransferase YP_006295873.1 1402136 D 754476 CDS YP_006295874.1 387127269 12847552 1403564..1404967 1 NC_017857.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Capsular polysaccharide synthesis enzyme CpsA, sugar transferase 1404967 12847552 Q7A_1399 Methylophaga nitratireducenticrescens Capsular polysaccharide synthesis enzyme CpsA, sugar transferase YP_006295874.1 1403564 D 754476 CDS YP_006295875.1 387127270 12847553 1405285..1405809 1 NC_017857.1 TIGRFAM: PEP-CTERM protein sorting domain; hypothetical protein 1405809 12847553 Q7A_1400 Methylophaga nitratireducenticrescens hypothetical protein YP_006295875.1 1405285 D 754476 CDS YP_006295876.1 387127271 12847554 1406207..1406737 1 NC_017857.1 hypothetical protein 1406737 12847554 Q7A_1401 Methylophaga nitratireducenticrescens hypothetical protein YP_006295876.1 1406207 D 754476 CDS YP_006295877.1 387127272 12847555 1407147..1407671 1 NC_017857.1 TIGRFAM: PEP-CTERM protein sorting domain; hypothetical protein 1407671 12847555 Q7A_1402 Methylophaga nitratireducenticrescens hypothetical protein YP_006295877.1 1407147 D 754476 CDS YP_006295878.1 387127273 12847556 1408243..1408794 1 NC_017857.1 PFAM: Polysaccharide biosynthesis/export protein; polysaccharide export protein 1408794 12847556 Q7A_1403 Methylophaga nitratireducenticrescens polysaccharide export protein YP_006295878.1 1408243 D 754476 CDS YP_006295879.1 387127274 12847557 1408833..1410017 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2320); long-chain fatty acid transport protein 1410017 12847557 Q7A_1404 Methylophaga nitratireducenticrescens long-chain fatty acid transport protein YP_006295879.1 1408833 D 754476 CDS YP_006295880.1 387127275 12847558 1410033..1411793 1 NC_017857.1 PFAM: Chain length determinant protein; lipopolysaccharide biosynthesis protein 1411793 12847558 Q7A_1405 Methylophaga nitratireducenticrescens lipopolysaccharide biosynthesis protein YP_006295880.1 1410033 D 754476 CDS YP_006295881.1 387127276 12847559 1411828..1412664 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; tyrosine-protein kinase Wzc 1412664 12847559 Q7A_1406 Methylophaga nitratireducenticrescens tyrosine-protein kinase Wzc YP_006295881.1 1411828 D 754476 CDS YP_006295882.1 387127277 12847560 1412737..1413558 1 NC_017857.1 general secretion pathway protein A 1413558 12847560 Q7A_1407 Methylophaga nitratireducenticrescens general secretion pathway protein A YP_006295882.1 1412737 D 754476 CDS YP_006295883.1 387127278 12847561 complement(1413646..1413771) 1 NC_017857.1 hypothetical protein 1413771 12847561 Q7A_1408 Methylophaga nitratireducenticrescens hypothetical protein YP_006295883.1 1413646 R 754476 CDS YP_006295884.1 387127279 12847562 1413915..1415807 1 NC_017857.1 hypothetical protein 1415807 12847562 Q7A_1409 Methylophaga nitratireducenticrescens hypothetical protein YP_006295884.1 1413915 D 754476 CDS YP_006295885.1 387127280 12847563 1416110..1417015 1 NC_017857.1 PFAM: Nucleotide-diphospho-sugar transferase; Nucleotide-diphospho-sugar transferase 1417015 12847563 Q7A_1410 Methylophaga nitratireducenticrescens Nucleotide-diphospho-sugar transferase YP_006295885.1 1416110 D 754476 CDS YP_006295886.1 387127281 12847564 complement(1417128..1418030) 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyl transferase, group 2 family protein 1418030 12847564 Q7A_1411 Methylophaga nitratireducenticrescens glycosyl transferase, group 2 family protein YP_006295886.1 1417128 R 754476 CDS YP_006295887.1 387127282 12847565 complement(1418033..1419400) 1 NC_017857.1 PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1419400 12847565 Q7A_1412 Methylophaga nitratireducenticrescens polysaccharide biosynthesis protein YP_006295887.1 1418033 R 754476 CDS YP_006295888.1 387127283 12847566 1419444..1420598 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase family protein 1420598 12847566 Q7A_1413 Methylophaga nitratireducenticrescens glycosyl transferase family protein YP_006295888.1 1419444 D 754476 CDS YP_006295889.1 387127284 12847567 1420595..1421506 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 1421506 12847567 Q7A_1414 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006295889.1 1420595 D 754476 CDS YP_006295890.1 387127285 12847568 1421576..1422901 1 NC_017857.1 hypothetical protein 1422901 12847568 Q7A_1415 Methylophaga nitratireducenticrescens hypothetical protein YP_006295890.1 1421576 D 754476 CDS YP_006295891.1 387127286 12847569 1423017..1424093 1 NC_017857.1 hypothetical protein 1424093 12847569 Q7A_1416 Methylophaga nitratireducenticrescens hypothetical protein YP_006295891.1 1423017 D 754476 CDS YP_006295892.1 387127287 12847570 1424090..1425070 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyltransferases-like protein 1425070 12847570 Q7A_1417 Methylophaga nitratireducenticrescens glycosyltransferases-like protein YP_006295892.1 1424090 D 754476 CDS YP_006295893.1 387127288 12847571 1425051..1425929 1 NC_017857.1 PFAM: Sulfotransferase domain; sulfotransferase 1425929 12847571 Q7A_1418 Methylophaga nitratireducenticrescens sulfotransferase YP_006295893.1 1425051 D 754476 CDS YP_006295894.1 387127289 12847572 1425926..1426456 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1426456 12847572 Q7A_1419 Methylophaga nitratireducenticrescens serine acetyltransferase YP_006295894.1 1425926 D 754476 CDS YP_006295895.1 387127290 12847573 1426453..1427448 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyl transferase 1427448 12847573 Q7A_1420 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295895.1 1426453 D 754476 CDS YP_006295896.1 387127291 12847574 complement(1427455..1428681) 1 NC_017857.1 glycosyl transferase 1428681 12847574 Q7A_1421 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295896.1 1427455 R 754476 CDS YP_006295897.1 387127292 12847575 1428767..1430197 1 NC_017857.1 PFAM: UbiA prenyltransferase family; integral membrane protein 1430197 12847575 Q7A_1422 Methylophaga nitratireducenticrescens integral membrane protein YP_006295897.1 1428767 D 754476 CDS YP_006295898.1 387127293 12847576 1430194..1430553 1 NC_017857.1 PFAM: EamA-like transporter family; Small Multi-Drug resistant family protein 1430553 12847576 Q7A_1423 Methylophaga nitratireducenticrescens Small Multi-Drug resistant family protein YP_006295898.1 1430194 D 754476 CDS YP_006295899.1 387127294 12847577 1430639..1431511 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyltransferase 1431511 12847577 Q7A_1424 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295899.1 1430639 D 754476 CDS YP_006295900.1 387127295 12847578 1431559..1432764 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 1432764 12847578 Q7A_1425 Methylophaga nitratireducenticrescens glycosyltransferase YP_006295900.1 1431559 D 754476 CDS YP_006295901.1 387127296 12847579 1432778..1434715 1 NC_017857.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 1434715 12847579 Q7A_1426 Methylophaga nitratireducenticrescens asparagine synthase YP_006295901.1 1432778 D 754476 CDS YP_006295902.1 387127297 12847580 1435167..1436291 1 NC_017857.1 PFAM: Polysaccharide biosynthesis/export protein; polysaccharide export protein 1436291 12847580 Q7A_1427 Methylophaga nitratireducenticrescens polysaccharide export protein YP_006295902.1 1435167 D 754476 CDS YP_006295903.1 387127298 12847581 1436310..1437650 1 NC_017857.1 PFAM: Chain length determinant protein; tyrosine-protein kinase Wzc 1437650 12847581 Q7A_1428 Methylophaga nitratireducenticrescens tyrosine-protein kinase Wzc YP_006295903.1 1436310 D 754476 CDS YP_006295904.1 387127299 12847582 1437647..1438291 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; tyrosine-protein kinase EpsD 1438291 12847582 Q7A_1429 Methylophaga nitratireducenticrescens tyrosine-protein kinase EpsD YP_006295904.1 1437647 D 754476 CDS YP_006295905.1 387127300 12847583 1438542..1440050 1 NC_017857.1 PFAM: O-Antigen ligase; membrane protein 1440050 12847583 Q7A_1430 Methylophaga nitratireducenticrescens membrane protein YP_006295905.1 1438542 D 754476 CDS YP_006295906.1 387127301 12847584 1440054..1441481 1 NC_017857.1 PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1441481 12847584 Q7A_1431 Methylophaga nitratireducenticrescens polysaccharide biosynthesis protein YP_006295906.1 1440054 D 754476 CDS YP_006295907.1 387127302 12847585 1441489..1442586 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase 1442586 12847585 Q7A_1432 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295907.1 1441489 D 754476 CDS YP_006295908.1 387127303 12847586 1442865..1443164 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1443164 12847586 Q7A_1433 Methylophaga nitratireducenticrescens serine acetyltransferase YP_006295908.1 1442865 D 754476 CDS YP_006295909.1 387127304 12847587 1443161..1443739 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); serine acetyltransferase 1443739 12847587 Q7A_1434 Methylophaga nitratireducenticrescens serine acetyltransferase YP_006295909.1 1443161 D 754476 CDS YP_006295910.1 387127305 12847588 1443739..1444686 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyl transferase 1444686 12847588 Q7A_1435 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295910.1 1443739 D 754476 CDS YP_006295911.1 387127306 12847589 1444743..1445846 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase 1445846 12847589 Q7A_1436 Methylophaga nitratireducenticrescens glycosyl transferase YP_006295911.1 1444743 D 754476 CDS YP_006295912.1 387127307 12847590 1445850..1446686 1 NC_017857.1 PFAM: Methyltransferase domain; methyltransferase 1446686 12847590 Q7A_1437 Methylophaga nitratireducenticrescens methyltransferase YP_006295912.1 1445850 D 754476 CDS YP_006295913.1 387127308 12847591 1446725..1448290 1 NC_017857.1 alpha-L-arabinofuranosidase 1448290 12847591 Q7A_1438 Methylophaga nitratireducenticrescens alpha-L-arabinofuranosidase YP_006295913.1 1446725 D 754476 CDS YP_006295914.1 387127309 12847592 1448341..1449507 1 NC_017857.1 PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1; alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase 1449507 12847592 Q7A_1439 Methylophaga nitratireducenticrescens alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase YP_006295914.1 1448341 D 754476 CDS YP_006295915.1 387127310 12847593 complement(1449607..1449732) 1 NC_017857.1 hypothetical protein 1449732 12847593 Q7A_1440 Methylophaga nitratireducenticrescens hypothetical protein YP_006295915.1 1449607 R 754476 CDS YP_006295916.1 387127311 12847594 1449967..1451070 1 NC_017857.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; N-acetylmannosaminyltransferase 1451070 12847594 Q7A_1441 Methylophaga nitratireducenticrescens N-acetylmannosaminyltransferase YP_006295916.1 1449967 D 754476 CDS YP_006295917.1 387127312 12847595 1451134..1452636 1 NC_017857.1 PFAM: Transmembrane exosortase (Exosortase_EpsH); Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein; exosortase D, VPLPA-CTERM-specific; exosortase/archaeosortase family protein; exosortase; transmembrane protein EpsH 1452636 12847595 Q7A_1442 Methylophaga nitratireducenticrescens transmembrane protein EpsH YP_006295917.1 1451134 D 754476 CDS YP_006295918.1 387127313 12847596 1452653..1455034 1 NC_017857.1 TPR repeat protein 1455034 12847596 Q7A_1443 Methylophaga nitratireducenticrescens TPR repeat protein YP_006295918.1 1452653 D 754476 CDS YP_006295919.1 387127314 12847597 complement(1455107..1455634) 1 NC_017857.1 PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 1455634 12847597 Q7A_1444 Methylophaga nitratireducenticrescens cytochrome B561 YP_006295919.1 1455107 R 754476 CDS YP_006295920.1 387127315 12847598 complement(1455766..1456707) 1 NC_017857.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator 1456707 12847598 Q7A_1445 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295920.1 1455766 R 754476 CDS YP_006295921.1 387127316 12847599 1456826..1458241 1 NC_017857.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; pyruvate carboxyl transferase subunit A 1458241 12847599 Q7A_1446 Methylophaga nitratireducenticrescens pyruvate carboxyl transferase subunit A YP_006295921.1 1456826 D 754476 CDS YP_006295922.1 387127317 12847600 1458265..1460055 1 NC_017857.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate carboxyl transferase subunit B 1460055 12847600 Q7A_1447 Methylophaga nitratireducenticrescens pyruvate carboxyl transferase subunit B YP_006295922.1 1458265 D 754476 CDS YP_006295923.1 387127318 12847601 complement(1460167..1461258) 1 NC_017857.1 PFAM: Acyltransferase family; acyltransferase 1461258 12847601 Q7A_1448 Methylophaga nitratireducenticrescens acyltransferase YP_006295923.1 1460167 R 754476 CDS YP_006295924.1 387127319 12847602 complement(1461596..1461724) 1 NC_017857.1 hypothetical protein 1461724 12847602 Q7A_1449 Methylophaga nitratireducenticrescens hypothetical protein YP_006295924.1 1461596 R 754476 CDS YP_006295925.1 387127320 12847603 1462167..1463222 1 NC_017857.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; methionine gamma-lyase 1463222 12847603 Q7A_1450 Methylophaga nitratireducenticrescens methionine gamma-lyase YP_006295925.1 1462167 D 754476 CDS YP_006295926.1 387127321 12847604 1463461..1463760 1 NC_017857.1 hypothetical protein 1463760 12847604 Q7A_1451 Methylophaga nitratireducenticrescens hypothetical protein YP_006295926.1 1463461 D 754476 CDS YP_006295927.1 387127322 12847605 complement(1463757..1464422) 1 NC_017857.1 hypothetical protein 1464422 12847605 Q7A_1452 Methylophaga nitratireducenticrescens hypothetical protein YP_006295927.1 1463757 R 754476 CDS YP_006295928.1 387127323 12847606 complement(1464490..1465317) 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate transport ATP-binding protein PstB 1465317 12847606 Q7A_1453 Methylophaga nitratireducenticrescens phosphate transport ATP-binding protein PstB YP_006295928.1 1464490 R 754476 CDS YP_006295929.1 387127324 12847607 complement(1465332..1466231) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter permease 1466231 12847607 Q7A_1454 Methylophaga nitratireducenticrescens phosphate ABC transporter permease YP_006295929.1 1465332 R 754476 CDS YP_006295930.1 387127325 12847608 complement(1466228..1467205) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 1467205 12847608 Q7A_1455 Methylophaga nitratireducenticrescens phosphate ABC transporter permease YP_006295930.1 1466228 R 754476 CDS YP_006295931.1 387127326 12847609 complement(1467337..1468395) 1 NC_017857.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein 1468395 12847609 Q7A_1456 Methylophaga nitratireducenticrescens phosphate ABC transporter substrate-binding protein YP_006295931.1 1467337 R 754476 CDS YP_006295932.1 387127327 12847610 complement(1468708..1470480) 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 1470480 12847610 Q7A_1457 Methylophaga nitratireducenticrescens methanol dehydrogenase large subunit protein YP_006295932.1 1468708 R 754476 CDS YP_006295933.1 387127328 12847612 1471045..1471689 1 NC_017857.1 hypothetical protein 1471689 12847612 Q7A_1459 Methylophaga nitratireducenticrescens hypothetical protein YP_006295933.1 1471045 D 754476 CDS YP_006295934.1 387127329 12847613 complement(1471776..1472963) 1 NC_017857.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 1472963 12847613 Q7A_1460 Methylophaga nitratireducenticrescens Aspartate aminotransferase YP_006295934.1 1471776 R 754476 CDS YP_006295935.1 387127330 12847614 1473036..1475048 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B 1475048 12847614 Q7A_1461 Methylophaga nitratireducenticrescens excinuclease ABC subunit B YP_006295935.1 1473036 D 754476 CDS YP_006295936.1 387127331 12847616 1475304..1477229 1 NC_017857.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; threonyl-tRNA synthetase 1477229 12847616 Q7A_1463 Methylophaga nitratireducenticrescens threonyl-tRNA synthetase YP_006295936.1 1475304 D 754476 CDS YP_006295937.1 387127332 12847617 1477327..1477752 1 NC_017857.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 1477752 12847617 Q7A_1464 Methylophaga nitratireducenticrescens translation initiation factor 3 YP_006295937.1 1477327 D 754476 CDS YP_006295938.1 387127333 12847618 1477785..1477982 1 NC_017857.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 1477982 12847618 Q7A_1465 Methylophaga nitratireducenticrescens 50S ribosomal protein L35 YP_006295938.1 1477785 D 754476 CDS YP_006295939.1 387127334 12847619 1477998..1478357 1 NC_017857.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 1478357 12847619 Q7A_1466 Methylophaga nitratireducenticrescens 50S ribosomal protein L20 YP_006295939.1 1477998 D 754476 CDS YP_006295940.1 387127335 12847620 1478461..1479498 1 NC_017857.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1479498 12847620 Q7A_1467 Methylophaga nitratireducenticrescens phenylalanyl-tRNA synthetase subunit alpha YP_006295940.1 1478461 D 754476 CDS YP_006295941.1 387127336 12847621 1479514..1481889 1 NC_017857.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 1481889 12847621 Q7A_1468 Methylophaga nitratireducenticrescens phenylalanyl-tRNA synthetase subunit beta YP_006295941.1 1479514 D 754476 CDS YP_006295942.1 387127337 12847622 1481922..1482218 1 NC_017857.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; integration host factor subunit alpha 1482218 12847622 Q7A_1469 Methylophaga nitratireducenticrescens integration host factor subunit alpha YP_006295942.1 1481922 D 754476 CDS YP_006295943.1 387127338 12847623 1482202..1482564 1 NC_017857.1 PFAM: MerR family regulatory protein; transcriptional regulator 1482564 12847623 Q7A_1470 Methylophaga nitratireducenticrescens transcriptional regulator YP_006295943.1 1482202 D 754476 CDS YP_006295944.1 387127339 12847625 1482751..1483797 1 NC_017857.1 PFAM: Aldo/keto reductase family; Oxidoreductase 1483797 12847625 Q7A_1472 Methylophaga nitratireducenticrescens Oxidoreductase YP_006295944.1 1482751 D 754476 CDS YP_006295945.1 387127340 12847626 1483955..1486069 1 NC_017857.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1486069 12847626 Q7A_1473 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006295945.1 1483955 D 754476 CDS YP_006295946.1 387127341 12847627 complement(1486066..1486656) 1 NC_017857.1 PFAM: MarR family; regulatory protein 1486656 12847627 Q7A_1474 Methylophaga nitratireducenticrescens regulatory protein YP_006295946.1 1486066 R 754476 CDS YP_006295947.1 387127342 12847628 1486947..1487468 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase 1487468 12847628 Q7A_1475 Methylophaga nitratireducenticrescens L-2,4-diaminobutyric acid acetyltransferase YP_006295947.1 1486947 D 754476 CDS YP_006295948.1 387127343 12847629 1487513..1488874 1 NC_017857.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; diaminobutyrate-pyruvate aminotransferase 1488874 12847629 Q7A_1476 Methylophaga nitratireducenticrescens diaminobutyrate-pyruvate aminotransferase YP_006295948.1 1487513 D 754476 CDS YP_006295949.1 387127344 12847630 1488955..1489359 1 NC_017857.1 PFAM: Ectoine synthase; L-ectoine synthase 1489359 12847630 Q7A_1477 Methylophaga nitratireducenticrescens L-ectoine synthase YP_006295949.1 1488955 D 754476 CDS YP_006295950.1 387127345 12847631 1489417..1490859 1 NC_017857.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; Aspartokinase 1490859 12847631 Q7A_1478 Methylophaga nitratireducenticrescens Aspartokinase YP_006295950.1 1489417 D 754476 CDS YP_006295951.1 387127346 12847632 1490844..1491752 1 NC_017857.1 PFAM: ChAPs (Chs5p-Arf1p-binding proteins); TPR repeat containing protein 1491752 12847632 Q7A_1479 Methylophaga nitratireducenticrescens TPR repeat containing protein YP_006295951.1 1490844 D 754476 CDS YP_006295952.1 387127347 12847633 complement(1491777..1492313) 1 NC_017857.1 hypothetical protein 1492313 12847633 Q7A_1480 Methylophaga nitratireducenticrescens hypothetical protein YP_006295952.1 1491777 R 754476 CDS YP_006295953.1 387127348 12847634 complement(1492310..1492564) 1 NC_017857.1 hypothetical protein 1492564 12847634 Q7A_1481 Methylophaga nitratireducenticrescens hypothetical protein YP_006295953.1 1492310 R 754476 CDS YP_006295954.1 387127349 12847635 complement(1492688..1492981) 1 NC_017857.1 PFAM: Transposase DDE domain; IS4 family transposase 1492981 12847635 Q7A_1482 Methylophaga nitratireducenticrescens IS4 family transposase YP_006295954.1 1492688 R 754476 CDS YP_006295955.1 387127350 12847636 complement(1492978..1493451) 1 NC_017857.1 transposase 1493451 12847636 Q7A_1483 Methylophaga nitratireducenticrescens transposase YP_006295955.1 1492978 R 754476 CDS YP_006295956.1 387127351 12847637 1493984..1494916 1 NC_017857.1 PFAM: Fatty acid desaturase; delta-9 fatty acid desaturase 1494916 12847637 Q7A_1484 Methylophaga nitratireducenticrescens delta-9 fatty acid desaturase YP_006295956.1 1493984 D 754476 CDS YP_006295957.1 387127352 12847638 1494913..1496175 1 NC_017857.1 PFAM: Flavin containing amine oxidoreductase; Amine oxidase, flavin-containing 1496175 12847638 Q7A_1485 Methylophaga nitratireducenticrescens Amine oxidase, flavin-containing YP_006295957.1 1494913 D 754476 CDS YP_006295958.1 387127353 12847639 1496165..1496953 1 NC_017857.1 PFAM: Protein of unknown function (DUF1365); hypothetical protein 1496953 12847639 Q7A_1486 Methylophaga nitratireducenticrescens hypothetical protein YP_006295958.1 1496165 D 754476 CDS YP_006295959.1 387127354 12847640 1496950..1498212 1 NC_017857.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; S-adenosyl-L-methionine dependent methyltransferase 1498212 12847640 Q7A_1487 Methylophaga nitratireducenticrescens S-adenosyl-L-methionine dependent methyltransferase YP_006295959.1 1496950 D 754476 CDS YP_006295960.1 387127355 12847641 1498205..1498747 1 NC_017857.1 PFAM: Protein of unknown function (DUF2878); hypothetical protein 1498747 12847641 Q7A_1488 Methylophaga nitratireducenticrescens hypothetical protein YP_006295960.1 1498205 D 754476 CDS YP_006295961.1 387127356 12847642 1498734..1499498 1 NC_017857.1 PFAM: Protein of unknown function (DUF1295); hypothetical protein 1499498 12847642 Q7A_1489 Methylophaga nitratireducenticrescens hypothetical protein YP_006295961.1 1498734 D 754476 CDS YP_006295962.1 387127357 12847643 1499495..1500529 1 NC_017857.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase-like protein 1500529 12847643 Q7A_1490 Methylophaga nitratireducenticrescens cyclopropane-fatty-acyl-phospholipid synthase-like protein YP_006295962.1 1499495 D 754476 CDS YP_006295963.1 387127358 12847644 1500534..1501835 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein 1501835 12847644 Q7A_1491 Methylophaga nitratireducenticrescens two-component system sensor protein YP_006295963.1 1500534 D 754476 CDS YP_006295964.1 387127359 12847645 complement(1501848..1502546) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 1502546 12847645 Q7A_1492 Methylophaga nitratireducenticrescens response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_006295964.1 1501848 R 754476 CDS YP_006295965.1 387127360 12847646 1502732..1502926 1 NC_017857.1 PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 1502926 12847646 Q7A_1493 Methylophaga nitratireducenticrescens NAD(P)H-nitrite reductase YP_006295965.1 1502732 D 754476 CDS YP_006295966.1 387127361 12847647 1503202..1503681 1 NC_017857.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; Bacterioferritin 1503681 12847647 Q7A_1494 Methylophaga nitratireducenticrescens Bacterioferritin YP_006295966.1 1503202 D 754476 CDS YP_006295967.1 387127362 12847649 1504347..1505378 1 NC_017857.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1505378 12847649 Q7A_1496 Methylophaga nitratireducenticrescens S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_006295967.1 1504347 D 754476 CDS YP_006295968.1 387127363 12847650 1505694..1506437 1 NC_017857.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA:Cm32/Um32 methyltransferase 1506437 12847650 Q7A_1497 Methylophaga nitratireducenticrescens tRNA:Cm32/Um32 methyltransferase YP_006295968.1 1505694 D 754476 CDS YP_006295969.1 387127364 12847651 1506434..1507228 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine acetyltransferase 1507228 12847651 Q7A_1498 Methylophaga nitratireducenticrescens serine acetyltransferase YP_006295969.1 1506434 D 754476 CDS YP_006295970.1 387127365 12847652 1507279..1507728 1 NC_017857.1 PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein; Iron-sulfur cluster regulator IscR 1507728 12847652 Q7A_1499 Methylophaga nitratireducenticrescens Iron-sulfur cluster regulator IscR YP_006295970.1 1507279 D 754476 CDS YP_006295971.1 387127366 12847653 1507747..1508889 1 NC_017857.1 PFAM: Aminotransferase class-V; cysteine desulfurase 1508889 12847653 Q7A_1500 Methylophaga nitratireducenticrescens cysteine desulfurase YP_006295971.1 1507747 D 754476 CDS YP_006295972.1 387127367 12847654 1508894..1509226 1 NC_017857.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Iron binding protein IscA for iron-sulfur cluster assembly 1509226 12847654 Q7A_1501 Methylophaga nitratireducenticrescens Iron binding protein IscA for iron-sulfur cluster assembly YP_006295972.1 1508894 D 754476 CDS YP_006295973.1 387127368 12847655 1509321..1510625 1 NC_017857.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1510625 12847655 Q7A_1502 Methylophaga nitratireducenticrescens adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006295973.1 1509321 D 754476 CDS YP_006295974.1 387127369 12847656 1510989..1511555 1 NC_017857.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; alkyl hydroperoxide reductase protein C 1511555 12847656 Q7A_1503 Methylophaga nitratireducenticrescens alkyl hydroperoxide reductase protein C YP_006295974.1 1510989 D 754476 CDS YP_006295975.1 387127370 12847657 1511695..1513272 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; alkyl hydroperoxide reductase protein F 1513272 12847657 Q7A_1504 Methylophaga nitratireducenticrescens alkyl hydroperoxide reductase protein F YP_006295975.1 1511695 D 754476 CDS YP_006295976.1 387127371 12847658 complement(1513297..1513965) 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two-component response regulator 1513965 12847658 Q7A_1505 Methylophaga nitratireducenticrescens two-component response regulator YP_006295976.1 1513297 R 754476 CDS YP_006295977.1 387127372 12847659 complement(1513958..1515337) 1 NC_017857.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase, glucose-6-phosphate specific 1515337 12847659 Q7A_1506 Methylophaga nitratireducenticrescens signal transduction histidine kinase, glucose-6-phosphate specific YP_006295977.1 1513958 R 754476 CDS YP_006295978.1 387127373 12847660 1515778..1516797 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); moxR-like ATPase 1516797 12847660 Q7A_1507 Methylophaga nitratireducenticrescens moxR-like ATPase YP_006295978.1 1515778 D 754476 CDS YP_006295979.1 387127374 12847661 1516810..1517694 1 NC_017857.1 MxaS-like protein 1517694 12847661 Q7A_1508 Methylophaga nitratireducenticrescens MxaS-like protein YP_006295979.1 1516810 D 754476 CDS YP_006295980.1 387127375 12847662 1517706..1518545 1 NC_017857.1 hypothetical protein 1518545 12847662 Q7A_1509 Methylophaga nitratireducenticrescens hypothetical protein YP_006295980.1 1517706 D 754476 CDS YP_006295981.1 387127376 12847663 1518542..1519558 1 NC_017857.1 PFAM: von Willebrand factor type A domain; MxaC 1519558 12847663 Q7A_1510 Methylophaga nitratireducenticrescens MxaC YP_006295981.1 1518542 D 754476 CDS YP_006295982.1 387127377 12847664 1519551..1520090 1 NC_017857.1 MxaK-like protein 1520090 12847664 Q7A_1511 Methylophaga nitratireducenticrescens MxaK-like protein YP_006295982.1 1519551 D 754476 CDS YP_006295983.1 387127378 12847665 1520087..1521025 1 NC_017857.1 MxaL protein 1521025 12847665 Q7A_1512 Methylophaga nitratireducenticrescens MxaL protein YP_006295983.1 1520087 D 754476 CDS YP_006295984.1 387127379 12847666 1521320..1521445 1 NC_017857.1 hypothetical protein 1521445 12847666 Q7A_1513 Methylophaga nitratireducenticrescens hypothetical protein YP_006295984.1 1521320 D 754476 CDS YP_006295985.1 387127380 12847667 1521482..1521967 1 NC_017857.1 PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 1521967 12847667 Q7A_1514 Methylophaga nitratireducenticrescens hypothetical protein YP_006295985.1 1521482 D 754476 CDS YP_006295986.1 387127381 12847668 1521977..1523026 1 NC_017857.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; beta N-acetyl-glucosaminidase 1523026 12847668 Q7A_1515 Methylophaga nitratireducenticrescens beta N-acetyl-glucosaminidase YP_006295986.1 1521977 D 754476 CDS YP_006295987.1 387127382 12847669 1523102..1526587 1 NC_017857.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 1526587 12847669 Q7A_1516 Methylophaga nitratireducenticrescens DNA polymerase III subunit alpha YP_006295987.1 1523102 D 754476 CDS YP_006295988.1 387127383 12847670 1526668..1527771 1 NC_017857.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein PilT 1527771 12847670 Q7A_1517 Methylophaga nitratireducenticrescens twitching motility protein PilT YP_006295988.1 1526668 D 754476 CDS YP_006295989.1 387127384 12847671 1528029..1528985 1 NC_017857.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxyl transferase subunit alpha 1528985 12847671 Q7A_1518 Methylophaga nitratireducenticrescens acetyl-coenzyme A carboxyl transferase subunit alpha YP_006295989.1 1528029 D 754476 CDS YP_006295990.1 387127385 12847672 1529072..1530334 1 NC_017857.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 1530334 12847672 Q7A_1519 Methylophaga nitratireducenticrescens tRNA(Ile)-lysidine synthetase YP_006295990.1 1529072 D 754476 CDS YP_006295991.1 387127386 12847673 1530440..1532077 1 NC_017857.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 1532077 12847673 Q7A_1520 Methylophaga nitratireducenticrescens CTP synthase YP_006295991.1 1530440 D 754476 CDS YP_006295992.1 387127387 12847674 1532077..1532913 1 NC_017857.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase 1532913 12847674 Q7A_1521 Methylophaga nitratireducenticrescens 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase YP_006295992.1 1532077 D 754476 CDS YP_006295993.1 387127388 12847675 1532974..1534254 1 NC_017857.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 1534254 12847675 Q7A_1522 Methylophaga nitratireducenticrescens enolase YP_006295993.1 1532974 D 754476 CDS YP_006295994.1 387127389 12847676 1534265..1534552 1 NC_017857.1 PFAM: Septum formation initiator; cell division protein FtsB 1534552 12847676 Q7A_1523 Methylophaga nitratireducenticrescens cell division protein FtsB YP_006295994.1 1534265 D 754476 CDS YP_006295995.1 387127390 12847677 1534542..1535252 1 NC_017857.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1535252 12847677 Q7A_1524 Methylophaga nitratireducenticrescens 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006295995.1 1534542 D 754476 CDS YP_006295996.1 387127391 12847678 1535249..1535731 1 NC_017857.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1535731 12847678 Q7A_1525 Methylophaga nitratireducenticrescens 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_006295996.1 1535249 D 754476 CDS YP_006295997.1 387127392 12847679 1535728..1536804 1 NC_017857.1 PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine 13 synthase 1536804 12847679 Q7A_1526 Methylophaga nitratireducenticrescens tRNA pseudouridine 13 synthase YP_006295997.1 1535728 D 754476 CDS YP_006295998.1 387127393 12847680 1536833..1537606 1 NC_017857.1 PFAM: Protein of unknown function (DUF1223); hypothetical protein 1537606 12847680 Q7A_1527 Methylophaga nitratireducenticrescens hypothetical protein YP_006295998.1 1536833 D 754476 CDS YP_006295999.1 387127394 12847681 1537614..1539008 1 NC_017857.1 PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; Siroheme synthase / Uroporphyrinogen-III methyltransferase 1539008 12847681 Q7A_1528 Methylophaga nitratireducenticrescens Siroheme synthase / Uroporphyrinogen-III methyltransferase YP_006295999.1 1537614 D 754476 CDS YP_006296000.1 387127395 12847682 1539151..1541496 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 1541496 12847682 Q7A_1529 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296000.1 1539151 D 754476 CDS YP_006296001.1 387127396 12847683 complement(1541545..1542393) 1 NC_017857.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase 1542393 12847683 Q7A_1530 Methylophaga nitratireducenticrescens quinolinate phosphoribosyltransferase YP_006296001.1 1541545 R 754476 CDS YP_006296002.1 387127397 12847684 1542479..1543030 1 NC_017857.1 PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase AmpD 1543030 12847684 Q7A_1531 Methylophaga nitratireducenticrescens N-acetylmuramoyl-L-alanine amidase AmpD YP_006296002.1 1542479 D 754476 CDS YP_006296003.1 387127398 12847685 complement(1543074..1543697) 1 NC_017857.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase fklB 1543697 12847685 Q7A_1532 Methylophaga nitratireducenticrescens FKBP-type peptidyl-prolyl cis-trans isomerase fklB YP_006296003.1 1543074 R 754476 CDS YP_006296004.1 387127399 12847686 1544305..1544793 1 NC_017857.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial; Iron-sulfur cluster regulator IscR 1544793 12847686 Q7A_1533 Methylophaga nitratireducenticrescens Iron-sulfur cluster regulator IscR YP_006296004.1 1544305 D 754476 CDS YP_006296005.1 387127400 12847687 1544786..1546234 1 NC_017857.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-sulfur cluster assembly protein SufB 1546234 12847687 Q7A_1534 Methylophaga nitratireducenticrescens Iron-sulfur cluster assembly protein SufB YP_006296005.1 1544786 D 754476 CDS YP_006296006.1 387127401 12847688 1546310..1547083 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-sulfur cluster assembly ATPase protein SufC 1547083 12847688 Q7A_1535 Methylophaga nitratireducenticrescens Iron-sulfur cluster assembly ATPase protein SufC YP_006296006.1 1546310 D 754476 CDS YP_006296007.1 387127402 12847689 1547080..1548384 1 NC_017857.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; Iron-sulfur cluster assembly protein SufD 1548384 12847689 Q7A_1536 Methylophaga nitratireducenticrescens Iron-sulfur cluster assembly protein SufD YP_006296007.1 1547080 D 754476 CDS YP_006296008.1 387127403 12847690 1548377..1549600 1 NC_017857.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; cysteine desulfurase 1549600 12847690 Q7A_1537 Methylophaga nitratireducenticrescens cysteine desulfurase YP_006296008.1 1548377 D 754476 CDS YP_006296009.1 387127404 12847691 1549600..1550046 1 NC_017857.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 1550046 12847691 Q7A_1538 Methylophaga nitratireducenticrescens iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 YP_006296009.1 1549600 D 754476 CDS YP_006296010.1 387127405 12847692 1550051..1550386 1 NC_017857.1 PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; PaaD-like protein 1550386 12847692 Q7A_1539 Methylophaga nitratireducenticrescens PaaD-like protein YP_006296010.1 1550051 D 754476 CDS YP_006296011.1 387127406 12847693 1550827..1552599 1 NC_017857.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; lipid A core--O-antigen ligase-like protein 1552599 12847693 Q7A_1540 Methylophaga nitratireducenticrescens lipid A core--O-antigen ligase-like protein YP_006296011.1 1550827 D 754476 CDS YP_006296012.1 387127407 12847694 1552920..1553150 1 NC_017857.1 hypothetical protein 1553150 12847694 Q7A_1541 Methylophaga nitratireducenticrescens hypothetical protein YP_006296012.1 1552920 D 754476 CDS YP_006296013.1 387127408 12847695 1553341..1554483 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1554483 12847695 Q7A_1542 Methylophaga nitratireducenticrescens hypothetical protein YP_006296013.1 1553341 D 754476 CDS YP_006296014.1 387127409 12847696 1554706..1554837 1 NC_017857.1 hypothetical protein 1554837 12847696 Q7A_1543 Methylophaga nitratireducenticrescens hypothetical protein YP_006296014.1 1554706 D 754476 CDS YP_006296015.1 387127410 12847697 1554834..1555688 1 NC_017857.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1555688 12847697 Q7A_1544 Methylophaga nitratireducenticrescens hypothetical protein YP_006296015.1 1554834 D 754476 CDS YP_006296016.1 387127411 12847698 1555698..1556693 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1556693 12847698 Q7A_1545 Methylophaga nitratireducenticrescens hypothetical protein YP_006296016.1 1555698 D 754476 CDS YP_006296017.1 387127412 12847699 1556693..1558474 1 NC_017857.1 hypothetical protein 1558474 12847699 Q7A_1546 Methylophaga nitratireducenticrescens hypothetical protein YP_006296017.1 1556693 D 754476 CDS YP_006296018.1 387127413 12847700 1558471..1559154 1 NC_017857.1 hypothetical protein 1559154 12847700 Q7A_1547 Methylophaga nitratireducenticrescens hypothetical protein YP_006296018.1 1558471 D 754476 CDS YP_006296019.1 387127414 12847701 1559196..1560863 1 NC_017857.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; type IV fimbrial assembly, ATPase PilB 1560863 12847701 Q7A_1548 Methylophaga nitratireducenticrescens type IV fimbrial assembly, ATPase PilB YP_006296019.1 1559196 D 754476 CDS YP_006296020.1 387127415 12847702 1560928..1562073 1 NC_017857.1 PFAM: Bacterial type II secretion system protein F domain; General secretion pathway protein F/ Type IV fimbrial assembly protein PilC 1562073 12847702 Q7A_1549 Methylophaga nitratireducenticrescens General secretion pathway protein F/ Type IV fimbrial assembly protein PilC YP_006296020.1 1560928 D 754476 CDS YP_006296021.1 387127416 12847703 1562077..1562514 1 NC_017857.1 hypothetical protein 1562514 12847703 Q7A_1550 Methylophaga nitratireducenticrescens hypothetical protein YP_006296021.1 1562077 D 754476 CDS YP_006296022.1 387127417 12847704 1562515..1564674 1 NC_017857.1 PFAM: Protein of unknown function (DUF3438); Bacterial type II and III secretion system protein; General secretion pathway protein D 1564674 12847704 Q7A_1551 Methylophaga nitratireducenticrescens General secretion pathway protein D YP_006296022.1 1562515 D 754476 CDS YP_006296023.1 387127418 12847705 1564664..1565746 1 NC_017857.1 hypothetical protein 1565746 12847705 Q7A_1552 Methylophaga nitratireducenticrescens hypothetical protein YP_006296023.1 1564664 D 754476 CDS YP_006296024.1 387127419 12847706 1565921..1567249 1 NC_017857.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 1567249 12847706 Q7A_1553 Methylophaga nitratireducenticrescens signal transduction histidine kinase YP_006296024.1 1565921 D 754476 CDS YP_006296025.1 387127420 12847707 1567266..1567898 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; DNA binding response regulator 1567898 12847707 Q7A_1554 Methylophaga nitratireducenticrescens DNA binding response regulator YP_006296025.1 1567266 D 754476 CDS YP_006296026.1 387127421 12847708 1568038..1568475 1 NC_017857.1 PFAM: Hsp20/alpha crystallin family; Heat shock protein Hsp20 1568475 12847708 Q7A_1555 Methylophaga nitratireducenticrescens Heat shock protein Hsp20 YP_006296026.1 1568038 D 754476 CDS YP_006296027.1 387127422 12847709 1568646..1569206 1 NC_017857.1 PFAM: Peptidase propeptide and YPEB domain; propeptide, pepSY amd peptidase M4 1569206 12847709 Q7A_1556 Methylophaga nitratireducenticrescens propeptide, pepSY amd peptidase M4 YP_006296027.1 1568646 D 754476 CDS YP_006296028.1 387127423 12847710 complement(1569295..1571313) 1 NC_017857.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 1571313 12847710 Q7A_1557 Methylophaga nitratireducenticrescens methionyl-tRNA synthetase YP_006296028.1 1569295 R 754476 CDS YP_006296029.1 387127424 12847711 1571525..1572028 1 NC_017857.1 hypothetical protein 1572028 12847711 Q7A_1558 Methylophaga nitratireducenticrescens hypothetical protein YP_006296029.1 1571525 D 754476 CDS YP_006296030.1 387127425 12847712 1572028..1572615 1 NC_017857.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase cytochrome b subunit 1572615 12847712 Q7A_1559 Methylophaga nitratireducenticrescens succinate dehydrogenase cytochrome b subunit YP_006296030.1 1572028 D 754476 CDS YP_006296031.1 387127426 12847713 1572616..1574556 1 NC_017857.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; succinate dehydrogenase flavoprotein subunit 1574556 12847713 Q7A_1560 Methylophaga nitratireducenticrescens succinate dehydrogenase flavoprotein subunit YP_006296031.1 1572616 D 754476 CDS YP_006296032.1 387127427 12847714 1574553..1575278 1 NC_017857.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase iron-sulfur protein 1575278 12847714 Q7A_1561 Methylophaga nitratireducenticrescens succinate dehydrogenase iron-sulfur protein YP_006296032.1 1574553 D 754476 CDS YP_006296033.1 387127428 12847715 1575365..1577287 1 NC_017857.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein; hypothetical protein 1577287 12847715 Q7A_1562 Methylophaga nitratireducenticrescens hypothetical protein YP_006296033.1 1575365 D 754476 CDS YP_006296034.1 387127429 12847716 complement(1577332..1578144) 1 NC_017857.1 methyltransferase 1578144 12847716 Q7A_1563 Methylophaga nitratireducenticrescens methyltransferase YP_006296034.1 1577332 R 754476 CDS YP_006296035.1 387127430 12847717 1578363..1580519 1 NC_017857.1 PFAM: Sucrose synthase; Glycosyl transferases group 1; Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; sucrose-phosphate synthase, putative, glycosyltransferase domain; HAD-superfamily hydrolase, subfamily IIB; sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial; sucrose phosphate synthase 1580519 12847717 Q7A_1564 Methylophaga nitratireducenticrescens sucrose phosphate synthase YP_006296035.1 1578363 D 754476 CDS YP_006296036.1 387127431 12847718 1580520..1581377 1 NC_017857.1 PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: sucrose-6F-phosphate phosphohydrolase; HAD-superfamily hydrolase, subfamily IIB; alpha,alpha-trehalose-phosphate synthase 1581377 12847718 Q7A_1565 Methylophaga nitratireducenticrescens alpha,alpha-trehalose-phosphate synthase YP_006296036.1 1580520 D 754476 CDS YP_006296037.1 387127432 12847719 1581374..1582246 1 NC_017857.1 PFAM: pfkB family carbohydrate kinase; fructokinase 1582246 12847719 Q7A_1566 Methylophaga nitratireducenticrescens fructokinase YP_006296037.1 1581374 D 754476 CDS YP_006296038.1 387127433 12847720 1582289..1584244 1 NC_017857.1 PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 1584244 12847720 Q7A_1567 Methylophaga nitratireducenticrescens sucrose phosphorylase YP_006296038.1 1582289 D 754476 CDS YP_006296039.1 387127434 12847721 complement(1584253..1584639) 1 NC_017857.1 PFAM: Protein of unknown function, DUF393; cell division inhibitor 1584639 12847721 Q7A_1568 Methylophaga nitratireducenticrescens cell division inhibitor YP_006296039.1 1584253 R 754476 CDS YP_006296040.1 387127435 12847722 1584772..1586085 1 NC_017857.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: cryptochrome, DASH family; Cryptochrome 1586085 12847722 Q7A_1569 Methylophaga nitratireducenticrescens Cryptochrome YP_006296040.1 1584772 D 754476 CDS YP_006296041.1 387127436 12847724 1586705..1586830 1 NC_017857.1 hypothetical protein 1586830 12847724 Q7A_1572 Methylophaga nitratireducenticrescens hypothetical protein YP_006296041.1 1586705 D 754476 CDS YP_006296042.1 387127437 12847725 1586960..1587931 1 NC_017857.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG 1587931 12847725 Q7A_1573 Methylophaga nitratireducenticrescens inner membrane protein YrbG YP_006296042.1 1586960 D 754476 CDS YP_006296043.1 387127438 12847726 1588179..1589165 1 NC_017857.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1589165 12847726 Q7A_1574 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296043.1 1588179 D 754476 CDS YP_006296044.1 387127439 12847727 complement(1589308..1590618) 1 NC_017857.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; ribosomal protein S12p 1590618 12847727 Q7A_1575 Methylophaga nitratireducenticrescens ribosomal protein S12p YP_006296044.1 1589308 R 754476 CDS YP_006296045.1 387127440 12847728 1590835..1591614 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458; HAD-superfamily hydrolase 1591614 12847728 Q7A_1576 Methylophaga nitratireducenticrescens HAD-superfamily hydrolase YP_006296045.1 1590835 D 754476 CDS YP_006296046.1 387127441 12847729 complement(1591599..1592387) 1 NC_017857.1 PFAM: Memo-like protein; dioxygenase 1592387 12847729 Q7A_1577 Methylophaga nitratireducenticrescens dioxygenase YP_006296046.1 1591599 R 754476 CDS YP_006296047.1 387127442 12847730 complement(1592857..1593513) 1 NC_017857.1 PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like protein 1593513 12847730 Q7A_1578 Methylophaga nitratireducenticrescens pyridoxamine 5'-phosphate oxidase-like protein YP_006296047.1 1592857 R 754476 CDS YP_006296048.1 387127443 12847731 complement(1593594..1594499) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 1594499 12847731 Q7A_1579 Methylophaga nitratireducenticrescens transcriptional regulator YP_006296048.1 1593594 R 754476 CDS YP_006296049.1 387127444 12847732 1594625..1595206 1 NC_017857.1 PFAM: Flavodoxin-like fold; FMN-dependent NADH-azoreductase 1595206 12847732 Q7A_1580 Methylophaga nitratireducenticrescens FMN-dependent NADH-azoreductase YP_006296049.1 1594625 D 754476 CDS YP_006296050.1 387127445 12847733 1595217..1596059 1 NC_017857.1 PFAM: Pirin C-terminal cupin domain; Pirin; Pirin 1596059 12847733 Q7A_1581 Methylophaga nitratireducenticrescens Pirin YP_006296050.1 1595217 D 754476 CDS YP_006296051.1 387127446 12847734 complement(1596117..1596389) 1 NC_017857.1 PFAM: Putative phospholipid-binding domain; transport-associated protein 1596389 12847734 Q7A_1582 Methylophaga nitratireducenticrescens transport-associated protein YP_006296051.1 1596117 R 754476 CDS YP_006296052.1 387127447 12847735 1596571..1596933 1 NC_017857.1 cyclic nucleotide-binding domain (cNMP-BD) protein 1596933 12847735 Q7A_1583 Methylophaga nitratireducenticrescens cyclic nucleotide-binding domain (cNMP-BD) protein YP_006296052.1 1596571 D 754476 CDS YP_006296053.1 387127448 12847736 1597682..1598353 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; transcriptional regulator QseB 1598353 12847736 Q7A_1584 Methylophaga nitratireducenticrescens transcriptional regulator QseB YP_006296053.1 1597682 D 754476 CDS YP_006296054.1 387127449 12847737 1598340..1599707 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component sensor 1599707 12847737 Q7A_1585 Methylophaga nitratireducenticrescens two-component sensor YP_006296054.1 1598340 D 754476 CDS YP_006296055.1 387127450 12847738 1599744..1600865 1 NC_017857.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; alanine dehydrogenase 1600865 12847738 Q7A_1586 Methylophaga nitratireducenticrescens alanine dehydrogenase YP_006296055.1 1599744 D 754476 CDS YP_006296056.1 387127451 12847739 complement(1600823..1601536) 1 NC_017857.1 membrane-bound metal-dependent hydrolase 1601536 12847739 Q7A_1587 Methylophaga nitratireducenticrescens membrane-bound metal-dependent hydrolase YP_006296056.1 1600823 R 754476 CDS YP_006296057.1 387127452 12847740 complement(1601550..1601666) 1 NC_017857.1 hypothetical protein 1601666 12847740 Q7A_1588 Methylophaga nitratireducenticrescens hypothetical protein YP_006296057.1 1601550 R 754476 CDS YP_006296058.1 387127453 12847741 1601995..1603587 1 NC_017857.1 PFAM: Tetratricopeptide repeat; TIGRFAM: conserved hypothetical protein; hypothetical protein 1603587 12847741 Q7A_1589 Methylophaga nitratireducenticrescens hypothetical protein YP_006296058.1 1601995 D 754476 CDS YP_006296059.1 387127454 12847742 complement(1603691..1604158) 1 NC_017857.1 PFAM: AhpC/TSA family; thiol peroxidase, Bcp-type 1604158 12847742 Q7A_1590 Methylophaga nitratireducenticrescens thiol peroxidase, Bcp-type YP_006296059.1 1603691 R 754476 CDS YP_006296060.1 387127455 12847743 1604276..1605157 1 NC_017857.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 1605157 12847743 Q7A_1591 Methylophaga nitratireducenticrescens dihydrodipicolinate synthase YP_006296060.1 1604276 D 754476 CDS YP_006296061.1 387127456 12847744 1605248..1606210 1 NC_017857.1 PFAM: NlpB/DapX lipoprotein; outer membrane NlpB-like protein 1606210 12847744 Q7A_1592 Methylophaga nitratireducenticrescens outer membrane NlpB-like protein YP_006296061.1 1605248 D 754476 CDS YP_006296062.1 387127457 12847745 1606210..1606977 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase 1606977 12847745 Q7A_1593 Methylophaga nitratireducenticrescens metal-dependent hydrolase YP_006296062.1 1606210 D 754476 CDS YP_006296063.1 387127458 12847746 1606989..1607699 1 NC_017857.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; Phosphoribosylaminoimidazole-succinocarboxamide synthase 1607699 12847746 Q7A_1594 Methylophaga nitratireducenticrescens Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006296063.1 1606989 D 754476 CDS YP_006296064.1 387127459 12847747 1608087..1609796 1 NC_017857.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase; lipid A core-O-antigen ligase 1609796 12847747 Q7A_1595 Methylophaga nitratireducenticrescens lipid A core-O-antigen ligase YP_006296064.1 1608087 D 754476 CDS YP_006296065.1 387127460 12847748 1609958..1610374 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilin PilA 1610374 12847748 Q7A_1596 Methylophaga nitratireducenticrescens type IV pilin PilA YP_006296065.1 1609958 D 754476 CDS YP_006296066.1 387127461 12847749 1610574..1611071 1 NC_017857.1 PFAM: Protein of unknown function (DUF785); hypothetical protein 1611071 12847749 Q7A_1597 Methylophaga nitratireducenticrescens hypothetical protein YP_006296066.1 1610574 D 754476 CDS YP_006296067.1 387127462 12847750 1611068..1611973 1 NC_017857.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; ribosomal protein S6 glutaminyl transferase 1611973 12847750 Q7A_1598 Methylophaga nitratireducenticrescens ribosomal protein S6 glutaminyl transferase YP_006296067.1 1611068 D 754476 CDS YP_006296068.1 387127463 12847751 1611973..1613028 1 NC_017857.1 PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; deacylase 1613028 12847751 Q7A_1599 Methylophaga nitratireducenticrescens deacylase YP_006296068.1 1611973 D 754476 CDS YP_006296069.1 387127464 12847752 1613138..1615087 1 NC_017857.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; biosynthetic arginine decarboxylase 1615087 12847752 Q7A_1600 Methylophaga nitratireducenticrescens biosynthetic arginine decarboxylase YP_006296069.1 1613138 D 754476 CDS YP_006296070.1 387127465 12847753 1615112..1616311 1 NC_017857.1 PFAM: Saccharopine dehydrogenase; Carboxynorspermidine dehydrogenase 1616311 12847753 Q7A_1601 Methylophaga nitratireducenticrescens Carboxynorspermidine dehydrogenase YP_006296070.1 1615112 D 754476 CDS YP_006296071.1 387127466 12847754 1616669..1617835 1 NC_017857.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; Carboxynorspermidine decarboxylase 1617835 12847754 Q7A_1602 Methylophaga nitratireducenticrescens Carboxynorspermidine decarboxylase YP_006296071.1 1616669 D 754476 CDS YP_006296072.1 387127467 12847755 1617832..1618716 1 NC_017857.1 PFAM: Arginase family; TIGRFAM: agmatinase; Agmatinase 1618716 12847755 Q7A_1603 Methylophaga nitratireducenticrescens Agmatinase YP_006296072.1 1617832 D 754476 CDS YP_006296073.1 387127468 12847756 1619098..1619505 1 NC_017857.1 TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related; Isopropylmalate/homocitrate/citramalate synthase 1619505 12847756 Q7A_1604 Methylophaga nitratireducenticrescens Isopropylmalate/homocitrate/citramalate synthase YP_006296073.1 1619098 D 754476 CDS YP_006296074.1 387127469 12847757 1619589..1620176 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; Histone acetyltransferase HPA2-related acetyltransferase 1620176 12847757 Q7A_1605 Methylophaga nitratireducenticrescens Histone acetyltransferase HPA2-related acetyltransferase YP_006296074.1 1619589 D 754476 CDS YP_006296075.1 387127470 12847758 1620312..1621184 1 NC_017857.1 PFAM: Carbon-nitrogen hydrolase; hydrolase, carbon-nitrogen family 1621184 12847758 Q7A_1606 Methylophaga nitratireducenticrescens hydrolase, carbon-nitrogen family YP_006296075.1 1620312 D 754476 CDS YP_006296076.1 387127471 12847759 1621334..1622416 1 NC_017857.1 PFAM: ParA/MinD ATPase like; Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP 1622416 12847759 Q7A_1607 Methylophaga nitratireducenticrescens Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP YP_006296076.1 1621334 D 754476 CDS YP_006296077.1 387127472 12847760 1622508..1623023 1 NC_017857.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 1623023 12847760 Q7A_1608 Methylophaga nitratireducenticrescens deoxycytidine triphosphate deaminase YP_006296077.1 1622508 D 754476 CDS YP_006296078.1 387127473 12847761 1623038..1624069 1 NC_017857.1 PFAM: WD domain, G-beta repeat; hypothetical protein 1624069 12847761 Q7A_1609 Methylophaga nitratireducenticrescens hypothetical protein YP_006296078.1 1623038 D 754476 CDS YP_006296079.1 387127474 12847762 1624075..1624392 1 NC_017857.1 hypothetical protein 1624392 12847762 Q7A_1610 Methylophaga nitratireducenticrescens hypothetical protein YP_006296079.1 1624075 D 754476 CDS YP_006296080.1 387127475 12847763 1624397..1627048 1 NC_017857.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type; membrane alanine aminopeptidase N 1627048 12847763 Q7A_1611 Methylophaga nitratireducenticrescens membrane alanine aminopeptidase N YP_006296080.1 1624397 D 754476 CDS YP_006296081.1 387127476 12847764 1627048..1627470 1 NC_017857.1 PFAM: HIT domain; diadenosine tetraphosphate (Ap4A) hydrolase 1627470 12847764 Q7A_1612 Methylophaga nitratireducenticrescens diadenosine tetraphosphate (Ap4A) hydrolase YP_006296081.1 1627048 D 754476 CDS YP_006296082.1 387127477 12847765 1627499..1627747 1 NC_017857.1 PFAM: Protein of unknown function (DUF2835); hypothetical protein 1627747 12847765 Q7A_1613 Methylophaga nitratireducenticrescens hypothetical protein YP_006296082.1 1627499 D 754476 CDS YP_006296083.1 387127478 12847766 complement(1627752..1628117) 1 NC_017857.1 PFAM: RDD family; hypothetical protein 1628117 12847766 Q7A_1614 Methylophaga nitratireducenticrescens hypothetical protein YP_006296083.1 1627752 R 754476 CDS YP_006296084.1 387127479 12847767 1628271..1632155 1 NC_017857.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; Phosphoribosylformylglycinamidine synthase, synthetase subunit 1632155 12847767 Q7A_1615 Methylophaga nitratireducenticrescens Phosphoribosylformylglycinamidine synthase, synthetase subunit YP_006296084.1 1628271 D 754476 CDS YP_006296085.1 387127480 12847768 1632274..1634274 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1634274 12847768 Q7A_1616 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296085.1 1632274 D 754476 CDS YP_006296086.1 387127481 12847769 1634252..1634392 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator containing a CheY-like receiver domain 1634392 12847769 Q7A_1617 Methylophaga nitratireducenticrescens response regulator containing a CheY-like receiver domain YP_006296086.1 1634252 D 754476 CDS YP_006296087.1 387127482 12847770 1634515..1634964 1 NC_017857.1 PFAM: Rickettsia 17 kDa surface antigen; 17 kDa surface antigen 1634964 12847770 Q7A_1618 Methylophaga nitratireducenticrescens 17 kDa surface antigen YP_006296087.1 1634515 D 754476 CDS YP_006296088.1 387127483 12847771 complement(1635202..1638111) 1 NC_017857.1 PFAM: EAL domain; HAMP domain; GGDEF domain; Nitrate and nitrite sensing; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1638111 12847771 Q7A_1619 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296088.1 1635202 R 754476 CDS YP_006296089.1 387127484 12847772 1638547..1639179 1 NC_017857.1 PFAM: LysE type translocator; threonine efflux protein 1639179 12847772 Q7A_1620 Methylophaga nitratireducenticrescens threonine efflux protein YP_006296089.1 1638547 D 754476 CDS YP_006296090.1 387127485 12847773 1639498..1639851 1 NC_017857.1 PFAM: MASE1; diguanylate cyclase 1639851 12847773 Q7A_1621 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296090.1 1639498 D 754476 CDS YP_006296091.1 387127486 12847774 1639953..1641044 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1641044 12847774 Q7A_1622 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296091.1 1639953 D 754476 CDS YP_006296092.1 387127487 12847775 complement(1641073..1643073) 1 NC_017857.1 hypothetical protein 1643073 12847775 Q7A_1623 Methylophaga nitratireducenticrescens hypothetical protein YP_006296092.1 1641073 R 754476 CDS YP_006296093.1 387127488 12847776 complement(1643372..1644613) 1 NC_017857.1 hypothetical protein 1644613 12847776 Q7A_1624 Methylophaga nitratireducenticrescens hypothetical protein YP_006296093.1 1643372 R 754476 CDS YP_006296094.1 387127489 12847777 1645008..1646798 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1646798 12847777 Q7A_1625 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296094.1 1645008 D 754476 CDS YP_006296095.1 387127490 12847778 1646935..1648368 1 NC_017857.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase subunit CcoN 1648368 12847778 Q7A_1626 Methylophaga nitratireducenticrescens cytochrome c oxidase subunit CcoN YP_006296095.1 1646935 D 754476 CDS YP_006296096.1 387127491 12847779 1648423..1648536 1 NC_017857.1 hypothetical protein 1648536 12847779 Q7A_1627 Methylophaga nitratireducenticrescens hypothetical protein YP_006296096.1 1648423 D 754476 CDS YP_006296097.1 387127492 12847780 1648644..1649075 1 NC_017857.1 PFAM: CBS domain; hypothetical protein 1649075 12847780 Q7A_1628 Methylophaga nitratireducenticrescens hypothetical protein YP_006296097.1 1648644 D 754476 CDS YP_006296098.1 387127493 12847781 complement(1649294..1649449) 1 NC_017857.1 hypothetical protein 1649449 12847781 Q7A_1629 Methylophaga nitratireducenticrescens hypothetical protein YP_006296098.1 1649294 R 754476 CDS YP_006296099.1 387127494 12847782 1649568..1650017 1 NC_017857.1 PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; hypothetical protein 1650017 12847782 Q7A_1630 Methylophaga nitratireducenticrescens hypothetical protein YP_006296099.1 1649568 D 754476 CDS YP_006296100.1 387127495 12847783 1650077..1650748 1 NC_017857.1 PFAM: NADPH-dependent FMN reductase; BRAMP protein 1650748 12847783 Q7A_1631 Methylophaga nitratireducenticrescens BRAMP protein YP_006296100.1 1650077 D 754476 CDS YP_006296101.1 387127496 12847784 complement(1650776..1651771) 1 NC_017857.1 PFAM: Ion channel; Ion channel 1651771 12847784 Q7A_1632 Methylophaga nitratireducenticrescens Ion channel YP_006296101.1 1650776 R 754476 CDS YP_006296102.1 387127497 12847785 complement(1652254..1652406) 1 NC_017857.1 hypothetical protein 1652406 12847785 Q7A_1633 Methylophaga nitratireducenticrescens hypothetical protein YP_006296102.1 1652254 R 754476 CDS YP_006296103.1 387127498 12847786 1652426..1652974 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase 1652974 12847786 Q7A_1634 Methylophaga nitratireducenticrescens RNA polymerase YP_006296103.1 1652426 D 754476 CDS YP_006296104.1 387127499 12847787 1652994..1653965 1 NC_017857.1 PFAM: FecR protein; Fe2+-dicitrate sensor membrane protein 1653965 12847787 Q7A_1635 Methylophaga nitratireducenticrescens Fe2+-dicitrate sensor membrane protein YP_006296104.1 1652994 D 754476 CDS YP_006296105.1 387127500 12847788 1654088..1654270 1 NC_017857.1 hypothetical protein 1654270 12847788 Q7A_1636 Methylophaga nitratireducenticrescens hypothetical protein YP_006296105.1 1654088 D 754476 CDS YP_006296106.1 387127501 12847789 1654346..1657801 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TonB-dependent receptor 1657801 12847789 Q7A_1637 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296106.1 1654346 D 754476 CDS YP_006296107.1 387127502 12847790 1657964..1658830 1 NC_017857.1 hypothetical protein 1658830 12847790 Q7A_1638 Methylophaga nitratireducenticrescens hypothetical protein YP_006296107.1 1657964 D 754476 CDS YP_006296108.1 387127503 12847791 1658993..1659943 1 NC_017857.1 hypothetical protein 1659943 12847791 Q7A_1639 Methylophaga nitratireducenticrescens hypothetical protein YP_006296108.1 1658993 D 754476 CDS YP_006296109.1 387127504 12847792 1660049..1662244 1 NC_017857.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies); alkaline phosphatase 1662244 12847792 Q7A_1640 Methylophaga nitratireducenticrescens alkaline phosphatase YP_006296109.1 1660049 D 754476 CDS YP_006296110.1 387127505 12847793 1662324..1662794 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG-like 3 1662794 12847793 Q7A_1641 Methylophaga nitratireducenticrescens secretion system X protein GspG-like 3 YP_006296110.1 1662324 D 754476 CDS YP_006296111.1 387127506 12847794 1662807..1664003 1 NC_017857.1 PFAM: Bacterial type II secretion system protein F domain; secretion system X protein GspF 1664003 12847794 Q7A_1642 Methylophaga nitratireducenticrescens secretion system X protein GspF YP_006296111.1 1662807 D 754476 CDS YP_006296112.1 387127507 12847795 1664000..1665715 1 NC_017857.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; secretion system X protein GspE 1665715 12847795 Q7A_1643 Methylophaga nitratireducenticrescens secretion system X protein GspE YP_006296112.1 1664000 D 754476 CDS YP_006296113.1 387127508 12847796 1665696..1666571 1 NC_017857.1 hypothetical protein 1666571 12847796 Q7A_1644 Methylophaga nitratireducenticrescens hypothetical protein YP_006296113.1 1665696 D 754476 CDS YP_006296114.1 387127509 12847797 1666568..1667080 1 NC_017857.1 hypothetical protein 1667080 12847797 Q7A_1645 Methylophaga nitratireducenticrescens hypothetical protein YP_006296114.1 1666568 D 754476 CDS YP_006296115.1 387127510 12847798 1667085..1667645 1 NC_017857.1 PFAM: Pilus assembly protein, PilO; transmembrane protein 1667645 12847798 Q7A_1646 Methylophaga nitratireducenticrescens transmembrane protein YP_006296115.1 1667085 D 754476 CDS YP_006296116.1 387127511 12847799 1667787..1668134 1 NC_017857.1 hypothetical protein 1668134 12847799 Q7A_1647 Methylophaga nitratireducenticrescens hypothetical protein YP_006296116.1 1667787 D 754476 CDS YP_006296117.1 387127512 12847800 1668188..1670074 1 NC_017857.1 PFAM: Bacterial type II and III secretion system protein; secretion system X protein GspD 1670074 12847800 Q7A_1648 Methylophaga nitratireducenticrescens secretion system X protein GspD YP_006296117.1 1668188 D 754476 CDS YP_006296118.1 387127513 12847801 1670074..1670559 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG 1670559 12847801 Q7A_1649 Methylophaga nitratireducenticrescens secretion system X protein GspG YP_006296118.1 1670074 D 754476 CDS YP_006296119.1 387127514 12847802 1670559..1670945 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; secretion system X protein GspG-like 2 1670945 12847802 Q7A_1650 Methylophaga nitratireducenticrescens secretion system X protein GspG-like 2 YP_006296119.1 1670559 D 754476 CDS YP_006296120.1 387127515 12847803 1670932..1671411 1 NC_017857.1 secretion system X pseudopilin PulG 1671411 12847803 Q7A_1651 Methylophaga nitratireducenticrescens secretion system X pseudopilin PulG YP_006296120.1 1670932 D 754476 CDS YP_006296121.1 387127516 12847804 1671441..1673168 1 NC_017857.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family; type I secretion system ATPase, PrtD 1673168 12847804 Q7A_1652 Methylophaga nitratireducenticrescens type I secretion system ATPase, PrtD YP_006296121.1 1671441 D 754476 CDS YP_006296122.1 387127517 12847805 1673191..1674525 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE 1674525 12847805 Q7A_1653 Methylophaga nitratireducenticrescens ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE YP_006296122.1 1673191 D 754476 CDS YP_006296123.1 387127518 12847806 1674533..1675864 1 NC_017857.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family; type I secretion outer membrane protein, TolC 1675864 12847806 Q7A_1654 Methylophaga nitratireducenticrescens type I secretion outer membrane protein, TolC YP_006296123.1 1674533 D 754476 CDS YP_006296124.1 387127519 12847807 1676253..1676936 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 1676936 12847807 Q7A_1655 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006296124.1 1676253 D 754476 CDS YP_006296125.1 387127520 12847808 1676990..1677400 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1677400 12847808 Q7A_1656 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006296125.1 1676990 D 754476 CDS YP_006296126.1 387127521 12847809 1677440..1678429 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB family protein 1678429 12847809 Q7A_1657 Methylophaga nitratireducenticrescens TonB family protein YP_006296126.1 1677440 D 754476 CDS YP_006296127.1 387127522 12847810 1679071..1679382 1 NC_017857.1 PFAM: Protein of unknown function, DUF488; hypothetical protein 1679382 12847810 Q7A_1658 Methylophaga nitratireducenticrescens hypothetical protein YP_006296127.1 1679071 D 754476 CDS YP_006296128.1 387127523 12847813 complement(1679739..1679924) 1 NC_017857.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); Carbon storage regulator 1679924 12847813 Q7A_1661 Methylophaga nitratireducenticrescens Carbon storage regulator YP_006296128.1 1679739 R 754476 CDS YP_006296129.1 387127524 12847814 complement(1680152..1681372) 1 NC_017857.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Aspartokinase 1681372 12847814 Q7A_1662 Methylophaga nitratireducenticrescens Aspartokinase YP_006296129.1 1680152 R 754476 CDS YP_006296130.1 387127525 12847815 complement(1681376..1683979) 1 NC_017857.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 1683979 12847815 Q7A_1663 Methylophaga nitratireducenticrescens alanyl-tRNA synthetase YP_006296130.1 1681376 R 754476 CDS YP_006296131.1 387127526 12847816 complement(1683969..1684418) 1 NC_017857.1 PFAM: RecX family; Regulatory protein RecX 1684418 12847816 Q7A_1664 Methylophaga nitratireducenticrescens Regulatory protein RecX YP_006296131.1 1683969 R 754476 CDS YP_006296132.1 387127527 12847817 complement(1684415..1685455) 1 NC_017857.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A 1685455 12847817 Q7A_1665 Methylophaga nitratireducenticrescens recombinase A YP_006296132.1 1684415 R 754476 CDS YP_006296133.1 387127528 12847818 complement(1685576..1686088) 1 NC_017857.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; hypothetical protein 1686088 12847818 Q7A_1666 Methylophaga nitratireducenticrescens hypothetical protein YP_006296133.1 1685576 R 754476 CDS YP_006296134.1 387127529 12847819 1686105..1688654 1 NC_017857.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 1688654 12847819 Q7A_1667 Methylophaga nitratireducenticrescens DNA mismatch repair protein MutS YP_006296134.1 1686105 D 754476 CDS YP_006296135.1 387127530 12847820 complement(1688669..1688947) 1 NC_017857.1 PFAM: YcgL domain; protein YcgL 1688947 12847820 Q7A_1668 Methylophaga nitratireducenticrescens protein YcgL YP_006296135.1 1688669 R 754476 CDS YP_006296136.1 387127531 12847821 complement(1688973..1689362) 1 NC_017857.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 1689362 12847821 Q7A_1669 Methylophaga nitratireducenticrescens glyoxalase/bleomycin resistance protein/dioxygenase YP_006296136.1 1688973 R 754476 CDS YP_006296137.1 387127532 12847822 complement(1689391..1689810) 1 NC_017857.1 PFAM: OsmC-like protein; OsmC/Ohr-like protein 1689810 12847822 Q7A_1670 Methylophaga nitratireducenticrescens OsmC/Ohr-like protein YP_006296137.1 1689391 R 754476 CDS YP_006296138.1 387127533 12847823 1689860..1690594 1 NC_017857.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; cyclic AMP receptor protein 1690594 12847823 Q7A_1671 Methylophaga nitratireducenticrescens cyclic AMP receptor protein YP_006296138.1 1689860 D 754476 CDS YP_006296139.1 387127534 12847824 complement(1690574..1691371) 1 NC_017857.1 PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 1691371 12847824 Q7A_1672 Methylophaga nitratireducenticrescens indole-3-glycerol phosphate synthase YP_006296139.1 1690574 R 754476 CDS YP_006296140.1 387127535 12847825 complement(1691381..1692409) 1 NC_017857.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 1692409 12847825 Q7A_1673 Methylophaga nitratireducenticrescens anthranilate phosphoribosyltransferase YP_006296140.1 1691381 R 754476 CDS YP_006296141.1 387127536 12847826 complement(1692399..1692989) 1 NC_017857.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase 1692989 12847826 Q7A_1674 Methylophaga nitratireducenticrescens anthranilate synthase YP_006296141.1 1692399 R 754476 CDS YP_006296142.1 387127537 12847827 complement(1693005..1694498) 1 NC_017857.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; Anthranilate synthase, aminase component 1694498 12847827 Q7A_1675 Methylophaga nitratireducenticrescens Anthranilate synthase, aminase component YP_006296142.1 1693005 R 754476 CDS YP_006296143.1 387127538 12847828 complement(1694508..1695176) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase 1695176 12847828 Q7A_1676 Methylophaga nitratireducenticrescens phosphoglycolate phosphatase YP_006296143.1 1694508 R 754476 CDS YP_006296144.1 387127539 12847829 complement(1695180..1695872) 1 NC_017857.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1695872 12847829 Q7A_1677 Methylophaga nitratireducenticrescens ribulose-phosphate 3-epimerase YP_006296144.1 1695180 R 754476 CDS YP_006296145.1 387127540 12847830 1696052..1696954 1 NC_017857.1 PFAM: Protein of unknown function (DUF3530); hypothetical protein 1696954 12847830 Q7A_1678 Methylophaga nitratireducenticrescens hypothetical protein YP_006296145.1 1696052 D 754476 CDS YP_006296146.1 387127541 12847831 1696954..1697760 1 NC_017857.1 PFAM: Spermine/spermidine synthase; spermidine synthase 1697760 12847831 Q7A_1679 Methylophaga nitratireducenticrescens spermidine synthase YP_006296146.1 1696954 D 754476 CDS YP_006296147.1 387127542 12847832 1697893..1698450 1 NC_017857.1 PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 1698450 12847832 Q7A_1680 Methylophaga nitratireducenticrescens hypothetical protein YP_006296147.1 1697893 D 754476 CDS YP_006296148.1 387127543 12847833 1698595..1700772 1 NC_017857.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; Fe-S oxidoreductase 1700772 12847833 Q7A_1681 Methylophaga nitratireducenticrescens Fe-S oxidoreductase YP_006296148.1 1698595 D 754476 CDS YP_006296149.1 387127544 12847834 1700851..1701396 1 NC_017857.1 PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 1701396 12847834 Q7A_1682 Methylophaga nitratireducenticrescens cytochrome B561 YP_006296149.1 1700851 D 754476 CDS YP_006296150.1 387127545 12847835 1701414..1701983 1 NC_017857.1 PFAM: YceI-like domain; hypothetical protein 1701983 12847835 Q7A_1683 Methylophaga nitratireducenticrescens hypothetical protein YP_006296150.1 1701414 D 754476 CDS YP_006296151.1 387127546 12847836 complement(1701993..1702232) 1 NC_017857.1 hypothetical protein 1702232 12847836 Q7A_1684 Methylophaga nitratireducenticrescens hypothetical protein YP_006296151.1 1701993 R 754476 CDS YP_006296152.1 387127547 12847837 complement(1702248..1702376) 1 NC_017857.1 hypothetical protein 1702376 12847837 Q7A_1685 Methylophaga nitratireducenticrescens hypothetical protein YP_006296152.1 1702248 R 754476 CDS YP_006296153.1 387127548 12847838 1702455..1703141 1 NC_017857.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; metal-dependent proteases-like protein, putative molecular chaperone 1703141 12847838 Q7A_1686 Methylophaga nitratireducenticrescens metal-dependent proteases-like protein, putative molecular chaperone YP_006296153.1 1702455 D 754476 CDS YP_006296154.1 387127549 12847839 1703138..1703869 1 NC_017857.1 TIGRFAM: methyltransferase, putative; tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase 1703869 12847839 Q7A_1687 Methylophaga nitratireducenticrescens tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase YP_006296154.1 1703138 D 754476 CDS YP_006296155.1 387127550 12847840 1703866..1704837 1 NC_017857.1 PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative; tRNA (5-methoxyuridine) 34 synthase 1704837 12847840 Q7A_1688 Methylophaga nitratireducenticrescens tRNA (5-methoxyuridine) 34 synthase YP_006296155.1 1703866 D 754476 CDS YP_006296156.1 387127551 12847841 complement(1704870..1705208) 1 NC_017857.1 hypothetical protein 1705208 12847841 Q7A_1689 Methylophaga nitratireducenticrescens hypothetical protein YP_006296156.1 1704870 R 754476 CDS YP_006296157.1 387127552 12847842 complement(1705423..1705545) 1 NC_017857.1 hypothetical protein 1705545 12847842 Q7A_1690 Methylophaga nitratireducenticrescens hypothetical protein YP_006296157.1 1705423 R 754476 CDS YP_006296158.1 387127553 12847843 complement(1705499..1705690) 1 NC_017857.1 hypothetical protein 1705690 12847843 Q7A_1691 Methylophaga nitratireducenticrescens hypothetical protein YP_006296158.1 1705499 R 754476 CDS YP_006296159.1 387127554 12847844 complement(1705981..1706106) 1 NC_017857.1 hypothetical protein 1706106 12847844 Q7A_1692 Methylophaga nitratireducenticrescens hypothetical protein YP_006296159.1 1705981 R 754476 CDS YP_006296160.1 387127555 12847845 complement(1706286..1706696) 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 1706696 12847845 Q7A_1693 Methylophaga nitratireducenticrescens acetyltransferase YP_006296160.1 1706286 R 754476 CDS YP_006296161.1 387127556 12847846 complement(1706788..1708473) 1 NC_017857.1 PFAM: Citrate transporter; TrkA-C domain; Phosphate transporter family; sulfate permease 1708473 12847846 Q7A_1694 Methylophaga nitratireducenticrescens sulfate permease YP_006296161.1 1706788 R 754476 CDS YP_006296162.1 387127557 12847847 complement(1708666..1709190) 1 NC_017857.1 PFAM: Lipocalin-like domain; outer membrane lipoprotein 1709190 12847847 Q7A_1695 Methylophaga nitratireducenticrescens outer membrane lipoprotein YP_006296162.1 1708666 R 754476 CDS YP_006296163.1 387127558 12847848 complement(1709286..1710095) 1 NC_017857.1 PFAM: Ion transport protein; Kef-type K+ transport system NAD-binding protein 1710095 12847848 Q7A_1696 Methylophaga nitratireducenticrescens Kef-type K+ transport system NAD-binding protein YP_006296163.1 1709286 R 754476 CDS YP_006296164.1 387127559 12847849 complement(1710187..1710525) 1 NC_017857.1 PFAM: Arc-like DNA binding domain; Arc-like DNA binding domain-containing protein 1710525 12847849 Q7A_1697 Methylophaga nitratireducenticrescens Arc-like DNA binding domain-containing protein YP_006296164.1 1710187 R 754476 CDS YP_006296165.1 387127560 12847850 1710871..1712931 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 1712931 12847850 Q7A_1698 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296165.1 1710871 D 754476 CDS YP_006296166.1 387127561 12847851 1713011..1713391 1 NC_017857.1 PFAM: MerC mercury resistance protein; merC mercury resistance protein 1713391 12847851 Q7A_1699 Methylophaga nitratireducenticrescens merC mercury resistance protein YP_006296166.1 1713011 D 754476 CDS YP_006296167.1 387127562 12847852 1713384..1713794 1 NC_017857.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein 1713794 12847852 Q7A_1700 Methylophaga nitratireducenticrescens C4-type zinc finger protein YP_006296167.1 1713384 D 754476 CDS YP_006296168.1 387127563 12847853 1713775..1714986 1 NC_017857.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; metal chaperone 1714986 12847853 Q7A_1701 Methylophaga nitratireducenticrescens metal chaperone YP_006296168.1 1713775 D 754476 CDS YP_006296169.1 387127564 12847854 1714988..1715155 1 NC_017857.1 PFAM: Protein of unknown function (DUF1826); hypothetical protein 1715155 12847854 Q7A_1702 Methylophaga nitratireducenticrescens hypothetical protein YP_006296169.1 1714988 D 754476 CDS YP_006296170.1 387127565 12847855 1715359..1715625 1 NC_017857.1 PFAM: Protein of unknown function (DUF1826); hypothetical protein 1715625 12847855 Q7A_1703 Methylophaga nitratireducenticrescens hypothetical protein YP_006296170.1 1715359 D 754476 CDS YP_006296171.1 387127566 12847856 1715643..1716188 1 NC_017857.1 PFAM: Protein of unknown function (DUF2796); zinc-binding protein 1716188 12847856 Q7A_1704 Methylophaga nitratireducenticrescens zinc-binding protein YP_006296171.1 1715643 D 754476 CDS YP_006296172.1 387127567 12847857 1716188..1716652 1 NC_017857.1 PFAM: Ferric uptake regulator family; Zinc uptake regulation protein ZUR 1716652 12847857 Q7A_1705 Methylophaga nitratireducenticrescens Zinc uptake regulation protein ZUR YP_006296172.1 1716188 D 754476 CDS YP_006296173.1 387127568 12847858 1716740..1717441 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 1717441 12847858 Q7A_1706 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006296173.1 1716740 D 754476 CDS YP_006296174.1 387127569 12847859 1717542..1717868 1 NC_017857.1 hypothetical protein 1717868 12847859 Q7A_1707 Methylophaga nitratireducenticrescens hypothetical protein YP_006296174.1 1717542 D 754476 CDS YP_006296175.1 387127570 12847860 1717910..1719337 1 NC_017857.1 TonB-dependent receptor 1719337 12847860 Q7A_1708 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296175.1 1717910 D 754476 CDS YP_006296176.1 387127571 12847861 complement(1719324..1720208) 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 1720208 12847861 Q7A_1709 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296176.1 1719324 R 754476 CDS YP_006296177.1 387127572 12847862 1720283..1720525 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent receptor 1720525 12847862 Q7A_1710 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296177.1 1720283 D 754476 CDS YP_006296178.1 387127573 12847863 1720528..1721946 1 NC_017857.1 PFAM: Domain of unknown function (DUF3526); hypothetical protein 1721946 12847863 Q7A_1711 Methylophaga nitratireducenticrescens hypothetical protein YP_006296178.1 1720528 D 754476 CDS YP_006296179.1 387127574 12847864 1721948..1723312 1 NC_017857.1 PFAM: Domain of unknown function (DUF3526); hypothetical protein 1723312 12847864 Q7A_1712 Methylophaga nitratireducenticrescens hypothetical protein YP_006296179.1 1721948 D 754476 CDS YP_006296180.1 387127575 12847865 1723305..1724336 1 NC_017857.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; metal chaperone 1724336 12847865 Q7A_1713 Methylophaga nitratireducenticrescens metal chaperone YP_006296180.1 1723305 D 754476 CDS YP_006296181.1 387127576 12847866 1724320..1725963 1 NC_017857.1 PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A 1725963 12847866 Q7A_1714 Methylophaga nitratireducenticrescens formylmethanofuran dehydrogenase subunit A YP_006296181.1 1724320 D 754476 CDS YP_006296182.1 387127577 12847867 complement(1725968..1726546) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3299); hypothetical protein 1726546 12847867 Q7A_1715 Methylophaga nitratireducenticrescens hypothetical protein YP_006296182.1 1725968 R 754476 CDS YP_006296183.1 387127578 12847868 1726639..1727334 1 NC_017857.1 PFAM: ABC transporter; ABC transporter ATP-binding protein 1727334 12847868 Q7A_1716 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006296183.1 1726639 D 754476 CDS YP_006296184.1 387127579 12847869 1727324..1728562 1 NC_017857.1 PFAM: Predicted permease; antimicrobial peptide ABC transporter permease 1728562 12847869 Q7A_1717 Methylophaga nitratireducenticrescens antimicrobial peptide ABC transporter permease YP_006296184.1 1727324 D 754476 CDS YP_006296185.1 387127580 12847870 complement(1728564..1728983) 1 NC_017857.1 hypothetical protein 1728983 12847870 Q7A_1718 Methylophaga nitratireducenticrescens hypothetical protein YP_006296185.1 1728564 R 754476 CDS YP_006296186.1 387127581 12847871 1729066..1729377 1 NC_017857.1 hypothetical protein 1729377 12847871 Q7A_1719 Methylophaga nitratireducenticrescens hypothetical protein YP_006296186.1 1729066 D 754476 CDS YP_006296187.1 387127582 12847872 1729604..1731007 1 NC_017857.1 PFAM: GGDEF domain; MASE1; TIGRFAM: diguanylate cyclase (GGDEF) domain; signal transduction protein 1731007 12847872 Q7A_1720 Methylophaga nitratireducenticrescens signal transduction protein YP_006296187.1 1729604 D 754476 CDS YP_006296188.1 387127583 12847873 1731149..1731829 1 NC_017857.1 hypothetical protein 1731829 12847873 Q7A_1721 Methylophaga nitratireducenticrescens hypothetical protein YP_006296188.1 1731149 D 754476 CDS YP_006296189.1 387127584 12847874 complement(1732045..1733670) 1 NC_017857.1 iron-regulated membrane protein 1733670 12847874 Q7A_1722 Methylophaga nitratireducenticrescens iron-regulated membrane protein YP_006296189.1 1732045 R 754476 CDS YP_006296190.1 387127585 12847875 complement(1733684..1733971) 1 NC_017857.1 hypothetical protein 1733971 12847875 Q7A_1723 Methylophaga nitratireducenticrescens hypothetical protein YP_006296190.1 1733684 R 754476 CDS YP_006296191.1 387127586 12847876 complement(1733968..1734105) 1 NC_017857.1 hypothetical protein 1734105 12847876 Q7A_1724 Methylophaga nitratireducenticrescens hypothetical protein YP_006296191.1 1733968 R 754476 CDS YP_006296192.1 387127587 12847877 complement(1734309..1736351) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TonB-dependent receptor 1736351 12847877 Q7A_1725 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296192.1 1734309 R 754476 CDS YP_006296193.1 387127588 12847878 1736500..1736631 1 NC_017857.1 hypothetical protein 1736631 12847878 Q7A_1726 Methylophaga nitratireducenticrescens hypothetical protein YP_006296193.1 1736500 D 754476 CDS YP_006296194.1 387127589 12847879 1736628..1737650 1 NC_017857.1 AraC family transcriptional regulator 1737650 12847879 Q7A_1727 Methylophaga nitratireducenticrescens AraC family transcriptional regulator YP_006296194.1 1736628 D 754476 CDS YP_006296195.1 387127590 12847880 complement(1737785..1738360) 1 NC_017857.1 hypothetical protein 1738360 12847880 Q7A_1728 Methylophaga nitratireducenticrescens hypothetical protein YP_006296195.1 1737785 R 754476 CDS YP_006296196.1 387127591 12847881 complement(1738659..1739975) 1 NC_017857.1 PFAM: Mechanosensitive ion channel; Potassium efflux system KefA protein 1739975 12847881 Q7A_1729 Methylophaga nitratireducenticrescens Potassium efflux system KefA protein YP_006296196.1 1738659 R 754476 CDS YP_006296197.1 387127592 12847882 1740099..1740845 1 NC_017857.1 PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1740845 12847882 Q7A_1730 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP reductase YP_006296197.1 1740099 D 754476 CDS YP_006296198.1 387127593 12847883 complement(1740927..1741130) 1 NC_017857.1 PFAM: 'Cold-shock' DNA-binding domain; Cold shock protein 1741130 12847883 Q7A_1731 Methylophaga nitratireducenticrescens Cold shock protein YP_006296198.1 1740927 R 754476 CDS YP_006296199.1 387127594 12847884 complement(1741411..1742439) 1 NC_017857.1 PFAM: Acyltransferase family; hypothetical protein 1742439 12847884 Q7A_1732 Methylophaga nitratireducenticrescens hypothetical protein YP_006296199.1 1741411 R 754476 CDS YP_006296200.1 387127595 12847885 complement(1742533..1743510) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1743510 12847885 Q7A_1733 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296200.1 1742533 R 754476 CDS YP_006296201.1 387127596 12847886 1743751..1744719 1 NC_017857.1 PFAM: Protein of unknown function (DUF3080); hypothetical protein 1744719 12847886 Q7A_1734 Methylophaga nitratireducenticrescens hypothetical protein YP_006296201.1 1743751 D 754476 CDS YP_006296202.1 387127597 12847887 complement(1744723..1746336) 1 NC_017857.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 1746336 12847887 Q7A_1735 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis sensory transducer YP_006296202.1 1744723 R 754476 CDS YP_006296203.1 387127598 12847888 complement(1746443..1746583) 1 NC_017857.1 hypothetical protein 1746583 12847888 Q7A_1736 Methylophaga nitratireducenticrescens hypothetical protein YP_006296203.1 1746443 R 754476 CDS YP_006296204.1 387127599 12847889 1746869..1747753 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 1747753 12847889 Q7A_1737 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296204.1 1746869 D 754476 CDS YP_006296205.1 387127600 12847890 complement(1747900..1748262) 1 NC_017857.1 hypothetical protein 1748262 12847890 Q7A_1738 Methylophaga nitratireducenticrescens hypothetical protein YP_006296205.1 1747900 R 754476 CDS YP_006296206.1 387127601 12847891 complement(1748352..1748879) 1 NC_017857.1 PFAM: NADPH-dependent FMN reductase; flavoprotein 1748879 12847891 Q7A_1739 Methylophaga nitratireducenticrescens flavoprotein YP_006296206.1 1748352 R 754476 CDS YP_006296207.1 387127602 12847892 complement(1748988..1749263) 1 NC_017857.1 PFAM: Protein of unknown function (DUF861); enzyme of the cupin superfamily 1749263 12847892 Q7A_1740 Methylophaga nitratireducenticrescens enzyme of the cupin superfamily YP_006296207.1 1748988 R 754476 CDS YP_006296208.1 387127603 12847893 1749530..1751713 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; ferrichrome-iron receptor 1751713 12847893 Q7A_1741 Methylophaga nitratireducenticrescens ferrichrome-iron receptor YP_006296208.1 1749530 D 754476 CDS YP_006296209.1 387127604 12847894 complement(1751778..1753460) 1 NC_017857.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; NAD-dependent malic enzyme 1753460 12847894 Q7A_1742 Methylophaga nitratireducenticrescens NAD-dependent malic enzyme YP_006296209.1 1751778 R 754476 CDS YP_006296210.1 387127605 12847895 1753693..1754031 1 NC_017857.1 PFAM: Protein of unknown function (DUF2845); hypothetical protein 1754031 12847895 Q7A_1743 Methylophaga nitratireducenticrescens hypothetical protein YP_006296210.1 1753693 D 754476 CDS YP_006296211.1 387127606 12847896 1754170..1754475 1 NC_017857.1 hypothetical protein 1754475 12847896 Q7A_1744 Methylophaga nitratireducenticrescens hypothetical protein YP_006296211.1 1754170 D 754476 CDS YP_006296212.1 387127607 12847897 1754727..1755800 1 NC_017857.1 PFAM: HlyD family secretion protein; HlyD family secretion protein 1755800 12847897 Q7A_1745 Methylophaga nitratireducenticrescens HlyD family secretion protein YP_006296212.1 1754727 D 754476 CDS YP_006296213.1 387127608 12847898 1755800..1758577 1 NC_017857.1 PFAM: ABC transporter; multidrug ABC transporter permease 1758577 12847898 Q7A_1746 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006296213.1 1755800 D 754476 CDS YP_006296214.1 387127609 12847899 1758578..1759699 1 NC_017857.1 multidrug ABC transporter permease 1759699 12847899 Q7A_1747 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006296214.1 1758578 D 754476 CDS YP_006296215.1 387127610 12847900 complement(1759759..1760424) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 2-deoxyglucose-6-phosphate hydrolase YniC 1760424 12847900 Q7A_1748 Methylophaga nitratireducenticrescens 2-deoxyglucose-6-phosphate hydrolase YniC YP_006296215.1 1759759 R 754476 CDS YP_006296216.1 387127611 12847901 complement(1760530..1761168) 1 NC_017857.1 PFAM: GDSL-like Lipase/Acylhydrolase; Arylesterase precursor 1761168 12847901 Q7A_1749 Methylophaga nitratireducenticrescens Arylesterase precursor YP_006296216.1 1760530 R 754476 CDS YP_006296217.1 387127612 12847902 1761197..1761928 1 NC_017857.1 PFAM: ABC transporter; lipoprotein releasing system ATP-binding protein LolD 1761928 12847902 Q7A_1750 Methylophaga nitratireducenticrescens lipoprotein releasing system ATP-binding protein LolD YP_006296217.1 1761197 D 754476 CDS YP_006296218.1 387127613 12847903 1761925..1764408 1 NC_017857.1 PFAM: Predicted permease; ABC transporter permease 1764408 12847903 Q7A_1751 Methylophaga nitratireducenticrescens ABC transporter permease YP_006296218.1 1761925 D 754476 CDS YP_006296219.1 387127614 12847904 1764517..1765218 1 NC_017857.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 1765218 12847904 Q7A_1752 Methylophaga nitratireducenticrescens monofunctional biosynthetic peptidoglycan transglycosylase YP_006296219.1 1764517 D 754476 CDS YP_006296220.1 387127615 12847905 1765383..1765550 1 NC_017857.1 hypothetical protein 1765550 12847905 Q7A_1753 Methylophaga nitratireducenticrescens hypothetical protein YP_006296220.1 1765383 D 754476 CDS YP_006296221.1 387127616 12847906 1765709..1765903 1 NC_017857.1 PFAM: Protein of unknown function (DUF2789); hypothetical protein 1765903 12847906 Q7A_1754 Methylophaga nitratireducenticrescens hypothetical protein YP_006296221.1 1765709 D 754476 CDS YP_006296222.1 387127617 12847907 1765926..1767260 1 NC_017857.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; class II fumarate hydratase 1767260 12847907 Q7A_1755 Methylophaga nitratireducenticrescens class II fumarate hydratase YP_006296222.1 1765926 D 754476 CDS YP_006296223.1 387127618 12847908 complement(1767275..1767625) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1232); hypothetical protein 1767625 12847908 Q7A_1756 Methylophaga nitratireducenticrescens hypothetical protein YP_006296223.1 1767275 R 754476 CDS YP_006296224.1 387127619 12847909 1767828..1769123 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; methyl-accepting chemotaxis protein 1769123 12847909 Q7A_1757 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006296224.1 1767828 D 754476 CDS YP_006296225.1 387127620 12847910 1769343..1770281 1 NC_017857.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 1770281 12847910 Q7A_1758 Methylophaga nitratireducenticrescens nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein YP_006296225.1 1769343 D 754476 CDS YP_006296226.1 387127621 12847911 1770382..1772571 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 1772571 12847911 Q7A_1759 Methylophaga nitratireducenticrescens sensor histidine kinase with a response regulator receiver domain YP_006296226.1 1770382 D 754476 CDS YP_006296227.1 387127622 12847912 complement(1772580..1773065) 1 NC_017857.1 PFAM: Phosphate-starvation-inducible E; hypothetical protein 1773065 12847912 Q7A_1760 Methylophaga nitratireducenticrescens hypothetical protein YP_006296227.1 1772580 R 754476 CDS YP_006296228.1 387127623 12847913 1773507..1773872 1 NC_017857.1 hypothetical protein 1773872 12847913 Q7A_1761 Methylophaga nitratireducenticrescens hypothetical protein YP_006296228.1 1773507 D 754476 CDS YP_006296229.1 387127624 12847914 complement(1773960..1774109) 1 NC_017857.1 hypothetical protein 1774109 12847914 Q7A_1762 Methylophaga nitratireducenticrescens hypothetical protein YP_006296229.1 1773960 R 754476 CDS YP_006296230.1 387127625 12847915 1774421..1775329 1 NC_017857.1 PFAM: Putative neutral zinc metallopeptidase; YpfJ-like protein 1775329 12847915 Q7A_1763 Methylophaga nitratireducenticrescens YpfJ-like protein YP_006296230.1 1774421 D 754476 CDS YP_006296231.1 387127626 12847916 1775612..1776163 1 NC_017857.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 1776163 12847916 Q7A_1764 Methylophaga nitratireducenticrescens formaldehyde activating enzyme YP_006296231.1 1775612 D 754476 CDS YP_006296232.1 387127627 12847917 complement(1776244..1777650) 1 NC_017857.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alanine carboxypeptidase 1777650 12847917 Q7A_1765 Methylophaga nitratireducenticrescens D-alanyl-D-alanine carboxypeptidase YP_006296232.1 1776244 R 754476 CDS YP_006296233.1 387127628 12847918 complement(1777778..1778149) 1 NC_017857.1 transmembrane protein 1778149 12847918 Q7A_1766 Methylophaga nitratireducenticrescens transmembrane protein YP_006296233.1 1777778 R 754476 CDS YP_006296234.1 387127629 12847919 complement(1778275..1778514) 1 NC_017857.1 hypothetical protein 1778514 12847919 Q7A_1767 Methylophaga nitratireducenticrescens hypothetical protein YP_006296234.1 1778275 R 754476 CDS YP_006296235.1 387127630 12847921 complement(1779847..1780524) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; DNA-binding response regulator KdpE 1780524 12847921 Q7A_1770 Methylophaga nitratireducenticrescens DNA-binding response regulator KdpE YP_006296235.1 1779847 R 754476 CDS YP_006296236.1 387127631 12847922 complement(1780533..1782083) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel histidine kinase KdpD 1782083 12847922 Q7A_1771 Methylophaga nitratireducenticrescens Osmosensitive K+ channel histidine kinase KdpD YP_006296236.1 1780533 R 754476 CDS YP_006296237.1 387127632 12847924 1783735..1785108 1 NC_017857.1 PFAM: TrkA-N domain; TrkA-C domain; Trk system potassium uptake protein TrkA 1785108 12847924 Q7A_1774 Methylophaga nitratireducenticrescens Trk system potassium uptake protein TrkA YP_006296237.1 1783735 D 754476 CDS YP_006296238.1 387127633 12847925 1785217..1785843 1 NC_017857.1 PFAM: LysE type translocator; threonine efflux protein 1785843 12847925 Q7A_1775 Methylophaga nitratireducenticrescens threonine efflux protein YP_006296238.1 1785217 D 754476 CDS YP_006296239.1 387127634 12847926 complement(1785860..1786174) 1 NC_017857.1 hypothetical protein 1786174 12847926 Q7A_1776 Methylophaga nitratireducenticrescens hypothetical protein YP_006296239.1 1785860 R 754476 CDS YP_006296240.1 387127635 12847927 1786275..1786730 1 NC_017857.1 hypothetical protein 1786730 12847927 Q7A_1777 Methylophaga nitratireducenticrescens hypothetical protein YP_006296240.1 1786275 D 754476 CDS YP_006296241.1 387127636 12847928 complement(1786738..1786932) 1 NC_017857.1 short chain dehydrogenase 1786932 12847928 Q7A_1778 Methylophaga nitratireducenticrescens short chain dehydrogenase YP_006296241.1 1786738 R 754476 CDS YP_006296242.1 387127637 12847929 complement(1787077..1787274) 1 NC_017857.1 hypothetical protein 1787274 12847929 Q7A_1779 Methylophaga nitratireducenticrescens hypothetical protein YP_006296242.1 1787077 R 754476 CDS YP_006296243.1 387127638 12847930 complement(1787347..1788075) 1 NC_017857.1 PFAM: Dienelactone hydrolase family; dienelactone hydrolase-like enzyme 1788075 12847930 Q7A_1780 Methylophaga nitratireducenticrescens dienelactone hydrolase-like enzyme YP_006296243.1 1787347 R 754476 CDS YP_006296244.1 387127639 12847931 1788388..1789029 1 NC_017857.1 hypothetical protein 1789029 12847931 Q7A_1781 Methylophaga nitratireducenticrescens hypothetical protein YP_006296244.1 1788388 D 754476 CDS YP_006296245.1 387127640 12847932 1789082..1790257 1 NC_017857.1 hypothetical protein 1790257 12847932 Q7A_1782 Methylophaga nitratireducenticrescens hypothetical protein YP_006296245.1 1789082 D 754476 CDS YP_006296246.1 387127641 12847933 1790285..1791721 1 NC_017857.1 hypothetical protein 1791721 12847933 Q7A_1783 Methylophaga nitratireducenticrescens hypothetical protein YP_006296246.1 1790285 D 754476 CDS YP_006296247.1 387127642 12847934 1791708..1793714 1 NC_017857.1 PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain; hypothetical protein 1793714 12847934 Q7A_1784 Methylophaga nitratireducenticrescens hypothetical protein YP_006296247.1 1791708 D 754476 CDS YP_006296248.1 387127643 12847935 1793714..1793851 1 NC_017857.1 hypothetical protein 1793851 12847935 Q7A_1785 Methylophaga nitratireducenticrescens hypothetical protein YP_006296248.1 1793714 D 754476 CDS YP_006296249.1 387127644 12847936 1793854..1794645 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; biopolymer transport protein 1794645 12847936 Q7A_1786 Methylophaga nitratireducenticrescens biopolymer transport protein YP_006296249.1 1793854 D 754476 CDS YP_006296250.1 387127645 12847937 1794652..1795722 1 NC_017857.1 PFAM: von Willebrand factor type A domain; hypothetical protein 1795722 12847937 Q7A_1787 Methylophaga nitratireducenticrescens hypothetical protein YP_006296250.1 1794652 D 754476 CDS YP_006296251.1 387127646 12847938 1795719..1796669 1 NC_017857.1 hypothetical protein 1796669 12847938 Q7A_1788 Methylophaga nitratireducenticrescens hypothetical protein YP_006296251.1 1795719 D 754476 CDS YP_006296252.1 387127647 12847939 1797065..1798819 1 NC_017857.1 PFAM: CHASE2 domain; gliding motility protein GldF 1798819 12847939 Q7A_1789 Methylophaga nitratireducenticrescens gliding motility protein GldF YP_006296252.1 1797065 D 754476 CDS YP_006296253.1 387127648 12847940 1798785..1800362 1 NC_017857.1 PFAM: Peptidase family M48; peptidase 1800362 12847940 Q7A_1790 Methylophaga nitratireducenticrescens peptidase YP_006296253.1 1798785 D 754476 CDS YP_006296254.1 387127649 12847941 complement(1800437..1800772) 1 NC_017857.1 hypothetical protein 1800772 12847941 Q7A_1791 Methylophaga nitratireducenticrescens hypothetical protein YP_006296254.1 1800437 R 754476 CDS YP_006296255.1 387127650 12847942 complement(1800906..1801649) 1 NC_017857.1 PFAM: Dienelactone hydrolase family; dienelactone hydrolase 1801649 12847942 Q7A_1792 Methylophaga nitratireducenticrescens dienelactone hydrolase YP_006296255.1 1800906 R 754476 CDS YP_006296256.1 387127651 12847943 complement(1801710..1802495) 1 NC_017857.1 PFAM: Nuclease-related domain; Topoisomerase DNA binding C4 zinc finger; topoisomerase type I-like protein 1802495 12847943 Q7A_1793 Methylophaga nitratireducenticrescens topoisomerase type I-like protein YP_006296256.1 1801710 R 754476 CDS YP_006296257.1 387127652 12847944 complement(1802501..1804603) 1 NC_017857.1 PFAM: EAL domain; Phosphotransferase system, EIIC; TIGRFAM: PTS system, lactose/cellobiose family IIC component; PTS system cellobiose-specific transporter subunit IIC 1804603 12847944 Q7A_1794 Methylophaga nitratireducenticrescens PTS system cellobiose-specific transporter subunit IIC YP_006296257.1 1802501 R 754476 CDS YP_006296258.1 387127653 12847945 1805113..1805745 1 NC_017857.1 hypothetical protein 1805745 12847945 Q7A_1795 Methylophaga nitratireducenticrescens hypothetical protein YP_006296258.1 1805113 D 754476 CDS YP_006296259.1 387127654 12847946 1805827..1805946 1 NC_017857.1 hypothetical protein 1805946 12847946 Q7A_1796 Methylophaga nitratireducenticrescens hypothetical protein YP_006296259.1 1805827 D 754476 CDS YP_006296260.1 387127655 12847947 complement(1805949..1806587) 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component transcriptional regulator 1806587 12847947 Q7A_1797 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006296260.1 1805949 R 754476 CDS YP_006296261.1 387127656 12847948 complement(1806599..1807288) 1 NC_017857.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 1807288 12847948 Q7A_1798 Methylophaga nitratireducenticrescens signal transduction histidine kinase YP_006296261.1 1806599 R 754476 CDS YP_006296262.1 387127657 12847949 complement(1807344..1808192) 1 NC_017857.1 PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthase 1808192 12847949 Q7A_1799 Methylophaga nitratireducenticrescens dihydrodipicolinate synthase YP_006296262.1 1807344 R 754476 CDS YP_006296263.1 387127658 12847950 1808435..1809337 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; regulatory protein, LysR:LysR, substrate-binding protein 1809337 12847950 Q7A_1800 Methylophaga nitratireducenticrescens regulatory protein, LysR:LysR, substrate-binding protein YP_006296263.1 1808435 D 754476 CDS YP_006296264.1 387127659 12847951 1809492..1810703 1 NC_017857.1 PFAM: NnrS protein; NnrS protein involved in response to NO 1810703 12847951 Q7A_1801 Methylophaga nitratireducenticrescens NnrS protein involved in response to NO YP_006296264.1 1809492 D 754476 CDS YP_006296265.1 387127660 12847952 complement(1810727..1811035) 1 NC_017857.1 PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); hypothetical protein 1811035 12847952 Q7A_1802 Methylophaga nitratireducenticrescens hypothetical protein YP_006296265.1 1810727 R 754476 CDS YP_006296266.1 387127661 12847953 1811135..1811551 1 NC_017857.1 PFAM: MarR family; transcriptional regulator 1811551 12847953 Q7A_1803 Methylophaga nitratireducenticrescens transcriptional regulator YP_006296266.1 1811135 D 754476 CDS YP_006296267.1 387127662 12847954 complement(1812281..1814086) 1 NC_017857.1 hypothetical protein 1814086 12847954 Q7A_1804 Methylophaga nitratireducenticrescens hypothetical protein YP_006296267.1 1812281 R 754476 CDS YP_006296268.1 387127663 12847955 complement(1814094..1815053) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); ATPase 1815053 12847955 Q7A_1805 Methylophaga nitratireducenticrescens ATPase YP_006296268.1 1814094 R 754476 CDS YP_006296269.1 387127664 12847956 complement(1815063..1817087) 1 NC_017857.1 PFAM: Integrase core domain; TniA putative transposase 1817087 12847956 Q7A_1806 Methylophaga nitratireducenticrescens TniA putative transposase YP_006296269.1 1815063 R 754476 CDS YP_006296270.1 387127665 12847957 complement(1817075..1817842) 1 NC_017857.1 hypothetical protein 1817842 12847957 Q7A_1807 Methylophaga nitratireducenticrescens hypothetical protein YP_006296270.1 1817075 R 754476 CDS YP_006296271.1 387127666 12847958 complement(1817895..1818902) 1 NC_017857.1 hypothetical protein 1818902 12847958 Q7A_1808 Methylophaga nitratireducenticrescens hypothetical protein YP_006296271.1 1817895 R 754476 CDS YP_006296272.1 387127667 12847959 1819050..1820045 1 NC_017857.1 hypothetical protein 1820045 12847959 Q7A_1809 Methylophaga nitratireducenticrescens hypothetical protein YP_006296272.1 1819050 D 754476 CDS YP_006296273.1 387127668 12847960 complement(1820552..1821829) 1 NC_017857.1 hypothetical protein 1821829 12847960 Q7A_1810 Methylophaga nitratireducenticrescens hypothetical protein YP_006296273.1 1820552 R 754476 CDS YP_006296274.1 387127669 12847961 complement(1822222..1823586) 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase; Heavy metal sensor histidine kinase 1823586 12847961 Q7A_1811 Methylophaga nitratireducenticrescens Heavy metal sensor histidine kinase YP_006296274.1 1822222 R 754476 CDS YP_006296275.1 387127670 12847962 complement(1823618..1824310) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator; heavy metal response regulator 1824310 12847962 Q7A_1812 Methylophaga nitratireducenticrescens heavy metal response regulator YP_006296275.1 1823618 R 754476 CDS YP_006296276.1 387127671 12847963 1824629..1824907 1 NC_017857.1 hypothetical protein 1824907 12847963 Q7A_1813 Methylophaga nitratireducenticrescens hypothetical protein YP_006296276.1 1824629 D 754476 CDS YP_006296277.1 387127672 12847964 1825566..1827344 1 NC_017857.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; multicopper oxidase 1827344 12847964 Q7A_1814 Methylophaga nitratireducenticrescens multicopper oxidase YP_006296277.1 1825566 D 754476 CDS YP_006296278.1 387127673 12847965 1827354..1828103 1 NC_017857.1 PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B 1828103 12847965 Q7A_1815 Methylophaga nitratireducenticrescens Copper resistance protein B YP_006296278.1 1827354 D 754476 CDS YP_006296279.1 387127674 12847966 1828210..1829469 1 NC_017857.1 PFAM: Amino acid permease; amino acid permease 1829469 12847966 Q7A_1816 Methylophaga nitratireducenticrescens amino acid permease YP_006296279.1 1828210 D 754476 CDS YP_006296280.1 387127675 12847967 1829553..1829693 1 NC_017857.1 hypothetical protein 1829693 12847967 Q7A_1817 Methylophaga nitratireducenticrescens hypothetical protein YP_006296280.1 1829553 D 754476 CDS YP_006296281.1 387127676 12847968 complement(1829664..1829792) 1 NC_017857.1 hypothetical protein 1829792 12847968 Q7A_1818 Methylophaga nitratireducenticrescens hypothetical protein YP_006296281.1 1829664 R 754476 CDS YP_006296282.1 387127677 12847969 1830111..1830353 1 NC_017857.1 hypothetical protein 1830353 12847969 Q7A_1819 Methylophaga nitratireducenticrescens hypothetical protein YP_006296282.1 1830111 D 754476 CDS YP_006296283.1 387127678 12847970 complement(1830350..1831048) 1 NC_017857.1 hypothetical protein 1831048 12847970 Q7A_1820 Methylophaga nitratireducenticrescens hypothetical protein YP_006296283.1 1830350 R 754476 CDS YP_006296284.1 387127679 12847971 1831469..1831816 1 NC_017857.1 hypothetical protein 1831816 12847971 Q7A_1821 Methylophaga nitratireducenticrescens hypothetical protein YP_006296284.1 1831469 D 754476 CDS YP_006296285.1 387127680 12847972 complement(1831970..1832872) 1 NC_017857.1 PFAM: EamA-like transporter family; drug/metabolite transporter permease 1832872 12847972 Q7A_1822 Methylophaga nitratireducenticrescens drug/metabolite transporter permease YP_006296285.1 1831970 R 754476 CDS YP_006296286.1 387127681 12847973 complement(1833772..1834431) 1 NC_017857.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; hypothetical protein 1834431 12847973 Q7A_1823 Methylophaga nitratireducenticrescens hypothetical protein YP_006296286.1 1833772 R 754476 CDS YP_006296287.1 387127682 12847974 complement(1834428..1834547) 1 NC_017857.1 hypothetical protein 1834547 12847974 Q7A_1824 Methylophaga nitratireducenticrescens hypothetical protein YP_006296287.1 1834428 R 754476 CDS YP_006296288.1 387127683 12847975 complement(1835181..1835597) 1 NC_017857.1 hypothetical protein 1835597 12847975 Q7A_1825 Methylophaga nitratireducenticrescens hypothetical protein YP_006296288.1 1835181 R 754476 CDS YP_006296289.1 387127684 12847976 complement(1835667..1835789) 1 NC_017857.1 hypothetical protein 1835789 12847976 Q7A_1826 Methylophaga nitratireducenticrescens hypothetical protein YP_006296289.1 1835667 R 754476 CDS YP_006296290.1 387127685 12847977 complement(1836001..1838223) 1 NC_017857.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; Lead, cadmium, zinc and mercury transporting ATPase 1838223 12847977 Q7A_1827 Methylophaga nitratireducenticrescens Lead, cadmium, zinc and mercury transporting ATPase YP_006296290.1 1836001 R 754476 CDS YP_006296291.1 387127686 12847978 1838935..1839048 1 NC_017857.1 hypothetical protein 1839048 12847978 Q7A_1828 Methylophaga nitratireducenticrescens hypothetical protein YP_006296291.1 1838935 D 754476 CDS YP_006296292.1 387127687 12847979 1839126..1839380 1 NC_017857.1 hypothetical protein 1839380 12847979 Q7A_1829 Methylophaga nitratireducenticrescens hypothetical protein YP_006296292.1 1839126 D 754476 CDS YP_006296293.1 387127688 12847980 complement(1839346..1839468) 1 NC_017857.1 hypothetical protein 1839468 12847980 Q7A_1830 Methylophaga nitratireducenticrescens hypothetical protein YP_006296293.1 1839346 R 754476 CDS YP_006296294.1 387127689 12847981 1839481..1840833 1 NC_017857.1 PFAM: Outer membrane efflux protein; Heavy metal RND efflux outer membrane protein, CzcC family 1840833 12847981 Q7A_1831 Methylophaga nitratireducenticrescens Heavy metal RND efflux outer membrane protein, CzcC family YP_006296294.1 1839481 D 754476 CDS YP_006296295.1 387127690 12847982 1840833..1842728 1 NC_017857.1 PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit; Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family 1842728 12847982 Q7A_1832 Methylophaga nitratireducenticrescens Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family YP_006296295.1 1840833 D 754476 CDS YP_006296296.1 387127691 12847983 1842725..1845895 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 1845895 12847983 Q7A_1833 Methylophaga nitratireducenticrescens heavy metal efflux pump YP_006296296.1 1842725 D 754476 CDS YP_006296297.1 387127692 12847984 1845967..1846317 1 NC_017857.1 PFAM: Copper binding periplasmic protein CusF; Copper binding periplasmic protein CusF 1846317 12847984 Q7A_1834 Methylophaga nitratireducenticrescens Copper binding periplasmic protein CusF YP_006296297.1 1845967 D 754476 CDS YP_006296298.1 387127693 12847985 1847259..1848203 1 NC_017857.1 hypothetical protein 1848203 12847985 Q7A_1835 Methylophaga nitratireducenticrescens hypothetical protein YP_006296298.1 1847259 D 754476 CDS YP_006296299.1 387127694 12847986 1848196..1849179 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); ATP-dependent protease domain-containing protein 1849179 12847986 Q7A_1836 Methylophaga nitratireducenticrescens ATP-dependent protease domain-containing protein YP_006296299.1 1848196 D 754476 CDS YP_006296300.1 387127695 12847987 1849687..1849917 1 NC_017857.1 hypothetical protein 1849917 12847987 Q7A_1837 Methylophaga nitratireducenticrescens hypothetical protein YP_006296300.1 1849687 D 754476 CDS YP_006296301.1 387127696 12847988 1849939..1850706 1 NC_017857.1 phosphoesterase 1850706 12847988 Q7A_1838 Methylophaga nitratireducenticrescens phosphoesterase YP_006296301.1 1849939 D 754476 CDS YP_006296302.1 387127697 12847989 complement(1851225..1852013) 1 NC_017857.1 PFAM: ThiF family; UBA/THIF-type NAD/FAD binding protein 1852013 12847989 Q7A_1839 Methylophaga nitratireducenticrescens UBA/THIF-type NAD/FAD binding protein YP_006296302.1 1851225 R 754476 CDS YP_006296303.1 387127698 12847990 complement(1852082..1852885) 1 NC_017857.1 hypothetical protein 1852885 12847990 Q7A_1840 Methylophaga nitratireducenticrescens hypothetical protein YP_006296303.1 1852082 R 754476 CDS YP_006296304.1 387127699 12847991 complement(1852887..1854155) 1 NC_017857.1 hypothetical protein 1854155 12847991 Q7A_1841 Methylophaga nitratireducenticrescens hypothetical protein YP_006296304.1 1852887 R 754476 CDS YP_006296305.1 387127700 12847992 complement(1854167..1855741) 1 NC_017857.1 hypothetical protein 1855741 12847992 Q7A_1842 Methylophaga nitratireducenticrescens hypothetical protein YP_006296305.1 1854167 R 754476 CDS YP_006296306.1 387127701 12847993 1856554..1856793 1 NC_017857.1 hypothetical protein 1856793 12847993 Q7A_1843 Methylophaga nitratireducenticrescens hypothetical protein YP_006296306.1 1856554 D 754476 CDS YP_006296307.1 387127702 12847994 1857287..1859488 1 NC_017857.1 PFAM: ABC transporter; Peptidase C39 family; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, HlyB family; RTX toxin transporter 1859488 12847994 Q7A_1844 Methylophaga nitratireducenticrescens RTX toxin transporter YP_006296307.1 1857287 D 754476 CDS YP_006296308.1 387127703 12847995 1859485..1860885 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; HlyD family secretion protein 1860885 12847995 Q7A_1845 Methylophaga nitratireducenticrescens HlyD family secretion protein YP_006296308.1 1859485 D 754476 CDS YP_006296309.1 387127704 12847996 1861009..1861638 1 NC_017857.1 hypothetical protein 1861638 12847996 Q7A_1846 Methylophaga nitratireducenticrescens hypothetical protein YP_006296309.1 1861009 D 754476 CDS YP_006296310.1 387127705 12847997 1861638..1871900 1 NC_017857.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain; alkaline phosphatase 1871900 12847997 Q7A_1847 Methylophaga nitratireducenticrescens alkaline phosphatase YP_006296310.1 1861638 D 754476 CDS YP_006296311.1 387127706 12847998 1872418..1872996 1 NC_017857.1 hypothetical protein 1872996 12847998 Q7A_1848 Methylophaga nitratireducenticrescens hypothetical protein YP_006296311.1 1872418 D 754476 CDS YP_006296312.1 387127707 12847999 1873051..1874562 1 NC_017857.1 hypothetical protein 1874562 12847999 Q7A_1849 Methylophaga nitratireducenticrescens hypothetical protein YP_006296312.1 1873051 D 754476 CDS YP_006296313.1 387127708 12848000 1874546..1875409 1 NC_017857.1 PFAM: HNH endonuclease; HNH endonuclease 1875409 12848000 Q7A_1850 Methylophaga nitratireducenticrescens HNH endonuclease YP_006296313.1 1874546 D 754476 CDS YP_006296314.1 387127709 12848001 1875605..1877110 1 NC_017857.1 hypothetical protein 1877110 12848001 Q7A_1851 Methylophaga nitratireducenticrescens hypothetical protein YP_006296314.1 1875605 D 754476 CDS YP_006296315.1 387127710 12848002 complement(1877174..1877623) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; toxin-antitoxin system antitoxin component 1877623 12848002 Q7A_1852 Methylophaga nitratireducenticrescens toxin-antitoxin system antitoxin component YP_006296315.1 1877174 R 754476 CDS YP_006296316.1 387127711 12848003 complement(1877681..1879726) 1 NC_017857.1 hypothetical protein 1879726 12848003 Q7A_1853 Methylophaga nitratireducenticrescens hypothetical protein YP_006296316.1 1877681 R 754476 CDS YP_006296317.1 387127712 12848004 complement(1879723..1880799) 1 NC_017857.1 PFAM: Bacterial TniB protein; TniB protein 1880799 12848004 Q7A_1854 Methylophaga nitratireducenticrescens TniB protein YP_006296317.1 1879723 R 754476 CDS YP_006296318.1 387127713 12848005 complement(1880796..1882601) 1 NC_017857.1 PFAM: Integrase core domain; transposase 1882601 12848005 Q7A_1855 Methylophaga nitratireducenticrescens transposase YP_006296318.1 1880796 R 754476 CDS YP_006296319.1 387127714 12848006 complement(1882747..1883514) 1 NC_017857.1 hypothetical protein 1883514 12848006 Q7A_1856 Methylophaga nitratireducenticrescens hypothetical protein YP_006296319.1 1882747 R 754476 CDS YP_006296320.1 387127715 12848007 1883647..1884372 1 NC_017857.1 hypothetical protein 1884372 12848007 Q7A_1857 Methylophaga nitratireducenticrescens hypothetical protein YP_006296320.1 1883647 D 754476 CDS YP_006296321.1 387127716 12848008 1884921..1886198 1 NC_017857.1 hypothetical protein 1886198 12848008 Q7A_1858 Methylophaga nitratireducenticrescens hypothetical protein YP_006296321.1 1884921 D 754476 CDS YP_006296322.1 387127717 12848009 1886211..1888313 1 NC_017857.1 hypothetical protein 1888313 12848009 Q7A_1859 Methylophaga nitratireducenticrescens hypothetical protein YP_006296322.1 1886211 D 754476 CDS YP_006296323.1 387127718 12848010 1888945..1889781 1 NC_017857.1 hypothetical protein 1889781 12848010 Q7A_1860 Methylophaga nitratireducenticrescens hypothetical protein YP_006296323.1 1888945 D 754476 CDS YP_006296324.1 387127719 12848011 1890000..1891514 1 NC_017857.1 PFAM: Integrase core domain; transposase 1891514 12848011 Q7A_1861 Methylophaga nitratireducenticrescens transposase YP_006296324.1 1890000 D 754476 CDS YP_006296325.1 387127720 12848012 1891526..1892272 1 NC_017857.1 PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; mobile element protein 1892272 12848012 Q7A_1862 Methylophaga nitratireducenticrescens mobile element protein YP_006296325.1 1891526 D 754476 CDS YP_006296326.1 387127721 12848013 complement(1892817..1893965) 1 NC_017857.1 PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase subunit beta 1893965 12848013 Q7A_1863 Methylophaga nitratireducenticrescens ribonucleotide reductase subunit beta YP_006296326.1 1892817 R 754476 CDS YP_006296327.1 387127722 12848014 complement(1893965..1896832) 1 NC_017857.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleotide reductase subunit alpha 1896832 12848014 Q7A_1864 Methylophaga nitratireducenticrescens ribonucleotide reductase subunit alpha YP_006296327.1 1893965 R 754476 CDS YP_006296328.1 387127723 12848015 complement(1897313..1897837) 1 NC_017857.1 hypothetical protein 1897837 12848015 Q7A_1865 Methylophaga nitratireducenticrescens hypothetical protein YP_006296328.1 1897313 R 754476 CDS YP_006296329.1 387127724 12848016 1898159..1899556 1 NC_017857.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase; Cytochrome bd2, subunit I 1899556 12848016 Q7A_1866 Methylophaga nitratireducenticrescens Cytochrome bd2, subunit I YP_006296329.1 1898159 D 754476 CDS YP_006296330.1 387127725 12848017 1899556..1900554 1 NC_017857.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); Cytochrome bd2, subunit II 1900554 12848017 Q7A_1867 Methylophaga nitratireducenticrescens Cytochrome bd2, subunit II YP_006296330.1 1899556 D 754476 CDS YP_006296331.1 387127726 12848018 1900662..1902341 1 NC_017857.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit; transport ATP-binding protein CydD 1902341 12848018 Q7A_1868 Methylophaga nitratireducenticrescens transport ATP-binding protein CydD YP_006296331.1 1900662 D 754476 CDS YP_006296332.1 387127727 12848019 1902344..1904035 1 NC_017857.1 PFAM: ABC transporter; transport ATP-binding protein CydC 1904035 12848019 Q7A_1869 Methylophaga nitratireducenticrescens transport ATP-binding protein CydC YP_006296332.1 1902344 D 754476 CDS YP_006296333.1 387127728 12848020 1904166..1905911 1 NC_017857.1 PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; hemolysin activator protein 1905911 12848020 Q7A_1870 Methylophaga nitratireducenticrescens hemolysin activator protein YP_006296333.1 1904166 D 754476 CDS YP_006296334.1 387127729 12848021 1906139..1912126 1 NC_017857.1 PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; Large exoprotein 1912126 12848021 Q7A_1871 Methylophaga nitratireducenticrescens Large exoprotein YP_006296334.1 1906139 D 754476 CDS YP_006296335.1 387127730 12848022 1912137..1912271 1 NC_017857.1 hypothetical protein 1912271 12848022 Q7A_1872 Methylophaga nitratireducenticrescens hypothetical protein YP_006296335.1 1912137 D 754476 CDS YP_006296336.1 387127731 12848023 complement(1912366..1913250) 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 1913250 12848023 Q7A_1873 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296336.1 1912366 R 754476 CDS YP_006296337.1 387127732 12848024 1913560..1914447 1 NC_017857.1 hypothetical protein 1914447 12848024 Q7A_1874 Methylophaga nitratireducenticrescens hypothetical protein YP_006296337.1 1913560 D 754476 CDS YP_006296338.1 387127733 12848025 1914863..1915522 1 NC_017857.1 hypothetical protein 1915522 12848025 Q7A_1875 Methylophaga nitratireducenticrescens hypothetical protein YP_006296338.1 1914863 D 754476 CDS YP_006296339.1 387127734 12848026 1915552..1915848 1 NC_017857.1 hypothetical protein 1915848 12848026 Q7A_1876 Methylophaga nitratireducenticrescens hypothetical protein YP_006296339.1 1915552 D 754476 CDS YP_006296340.1 387127735 12848027 1916107..1916610 1 NC_017857.1 hypothetical protein 1916610 12848027 Q7A_1877 Methylophaga nitratireducenticrescens hypothetical protein YP_006296340.1 1916107 D 754476 CDS YP_006296341.1 387127736 12848028 1916723..1917097 1 NC_017857.1 hypothetical protein 1917097 12848028 Q7A_1878 Methylophaga nitratireducenticrescens hypothetical protein YP_006296341.1 1916723 D 754476 CDS YP_006296342.1 387127737 12848029 1917309..1917689 1 NC_017857.1 PFAM: PIN domain; PIN (PilT N terminus) domain-containing protein 1917689 12848029 Q7A_1879 Methylophaga nitratireducenticrescens PIN (PilT N terminus) domain-containing protein YP_006296342.1 1917309 D 754476 CDS YP_006296343.1 387127738 12848030 complement(1918055..1918201) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2938); hypothetical protein 1918201 12848030 Q7A_1880 Methylophaga nitratireducenticrescens hypothetical protein YP_006296343.1 1918055 R 754476 CDS YP_006296344.1 387127739 12848031 1918626..1919084 1 NC_017857.1 PFAM: MerR family regulatory protein; MerR, DNA binding; transcriptional regulator 1919084 12848031 Q7A_1881 Methylophaga nitratireducenticrescens transcriptional regulator YP_006296344.1 1918626 D 754476 CDS YP_006296345.1 387127740 12848032 complement(1919248..1920228) 1 NC_017857.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; monooxygenase, luciferase family( ) 1920228 12848032 Q7A_1882 Methylophaga nitratireducenticrescens monooxygenase, luciferase family( ) YP_006296345.1 1919248 R 754476 CDS YP_006296346.1 387127741 12848033 1920725..1922464 1 NC_017857.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 1922464 12848033 Q7A_1883 Methylophaga nitratireducenticrescens hypothetical protein YP_006296346.1 1920725 D 754476 CDS YP_006296347.1 387127742 12848035 1923384..1924055 1 NC_017857.1 PFAM: Uncharacterised protein family UPF0005; TEGT family carrier/transport protein 1924055 12848035 Q7A_1885 Methylophaga nitratireducenticrescens TEGT family carrier/transport protein YP_006296347.1 1923384 D 754476 CDS YP_006296348.1 387127743 12848036 complement(1924009..1924155) 1 NC_017857.1 hypothetical protein 1924155 12848036 Q7A_1886 Methylophaga nitratireducenticrescens hypothetical protein YP_006296348.1 1924009 R 754476 CDS YP_006296349.1 387127744 12848037 1924436..1925341 1 NC_017857.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; molybdenum cofactor biosynthesis protein MoaA 1925341 12848037 Q7A_1887 Methylophaga nitratireducenticrescens molybdenum cofactor biosynthesis protein MoaA YP_006296349.1 1924436 D 754476 CDS YP_006296350.1 387127745 12848038 1925334..1926173 1 NC_017857.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; formate dehydrogenase subunit D 1926173 12848038 Q7A_1888 Methylophaga nitratireducenticrescens formate dehydrogenase subunit D YP_006296350.1 1925334 D 754476 CDS YP_006296351.1 387127746 12848039 complement(1926381..1926791) 1 NC_017857.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; Nucleoside triphosphate pyrophosphohydrolase MazG 1926791 12848039 Q7A_1889 Methylophaga nitratireducenticrescens Nucleoside triphosphate pyrophosphohydrolase MazG YP_006296351.1 1926381 R 754476 CDS YP_006296352.1 387127747 12848040 complement(1926791..1927195) 1 NC_017857.1 PFAM: S4 domain; ribosome-associated heat shock protein 1927195 12848040 Q7A_1890 Methylophaga nitratireducenticrescens ribosome-associated heat shock protein YP_006296352.1 1926791 R 754476 CDS YP_006296353.1 387127748 12848041 complement(1927195..1929156) 1 NC_017857.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-CoA synthetase 1929156 12848041 Q7A_1891 Methylophaga nitratireducenticrescens acetyl-CoA synthetase YP_006296353.1 1927195 R 754476 CDS YP_006296354.1 387127749 12848042 complement(1929293..1930813) 1 NC_017857.1 PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 1930813 12848042 Q7A_1892 Methylophaga nitratireducenticrescens aldehyde dehydrogenase YP_006296354.1 1929293 R 754476 CDS YP_006296355.1 387127750 12848043 1931124..1932002 1 NC_017857.1 PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 1932002 12848043 Q7A_1893 Methylophaga nitratireducenticrescens AraC family transcriptional regulator YP_006296355.1 1931124 D 754476 CDS YP_006296356.1 387127751 12848044 1932396..1934159 1 NC_017857.1 PFAM: Surface antigen variable number repeat; Surface antigen; outer membrane protein 1934159 12848044 Q7A_1894 Methylophaga nitratireducenticrescens outer membrane protein YP_006296356.1 1932396 D 754476 CDS YP_006296357.1 387127752 12848045 1934192..1938211 1 NC_017857.1 PFAM: Family of unknown function (DUF490); hypothetical protein 1938211 12848045 Q7A_1895 Methylophaga nitratireducenticrescens hypothetical protein YP_006296357.1 1934192 D 754476 CDS YP_006296358.1 387127753 12848046 complement(1938281..1938703) 1 NC_017857.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; C4-type zinc finger protein 1938703 12848046 Q7A_1896 Methylophaga nitratireducenticrescens C4-type zinc finger protein YP_006296358.1 1938281 R 754476 CDS YP_006296359.1 387127754 12848047 1938814..1939581 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase-like hydrolase 1939581 12848047 Q7A_1897 Methylophaga nitratireducenticrescens haloacid dehalogenase-like hydrolase YP_006296359.1 1938814 D 754476 CDS YP_006296360.1 387127755 12848048 1939565..1940764 1 NC_017857.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 1940764 12848048 Q7A_1898 Methylophaga nitratireducenticrescens Aspartate aminotransferase YP_006296360.1 1939565 D 754476 CDS YP_006296361.1 387127756 12848049 1940835..1941038 1 NC_017857.1 PFAM: BFD-like [2Fe-2S] binding domain; NAD(P)H-nitrite reductase 1941038 12848049 Q7A_1899 Methylophaga nitratireducenticrescens NAD(P)H-nitrite reductase YP_006296361.1 1940835 D 754476 CDS YP_006296362.1 387127757 12848050 complement(1941099..1943147) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent receptor 1943147 12848050 Q7A_1900 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296362.1 1941099 R 754476 CDS YP_006296363.1 387127758 12848051 complement(1943431..1944189) 1 NC_017857.1 PFAM: Etoposide-induced protein 2.4 (EI24); sulfate transporter, CysZ-type 1944189 12848051 Q7A_1901 Methylophaga nitratireducenticrescens sulfate transporter, CysZ-type YP_006296363.1 1943431 R 754476 CDS YP_006296364.1 387127759 12848052 complement(1944201..1945478) 1 NC_017857.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase 1945478 12848052 Q7A_1902 Methylophaga nitratireducenticrescens Carbohydrate kinase YP_006296364.1 1944201 R 754476 CDS YP_006296365.1 387127760 12848053 complement(1945481..1945870) 1 NC_017857.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; NADPH dependent preQ0 reductase 1945870 12848053 Q7A_1903 Methylophaga nitratireducenticrescens NADPH dependent preQ0 reductase YP_006296365.1 1945481 R 754476 CDS YP_006296366.1 387127761 12848054 1945930..1946682 1 NC_017857.1 PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA; cell division protein ZipA 1946682 12848054 Q7A_1904 Methylophaga nitratireducenticrescens cell division protein ZipA YP_006296366.1 1945930 D 754476 CDS YP_006296367.1 387127762 12848055 1946666..1948678 1 NC_017857.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase 1948678 12848055 Q7A_1905 Methylophaga nitratireducenticrescens DNA ligase YP_006296367.1 1946666 D 754476 CDS YP_006296368.1 387127763 12848056 1948679..1949725 1 NC_017857.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; anthranilate phosphoribosyltransferase 1949725 12848056 Q7A_1906 Methylophaga nitratireducenticrescens anthranilate phosphoribosyltransferase YP_006296368.1 1948679 D 754476 CDS YP_006296369.1 387127764 12848057 1949722..1950132 1 NC_017857.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 1950132 12848057 Q7A_1907 Methylophaga nitratireducenticrescens secondary thiamine-phosphate synthase enzyme YP_006296369.1 1949722 D 754476 CDS YP_006296370.1 387127765 12848058 1950139..1950669 1 NC_017857.1 PFAM: Protein of unknown function (DUF615); hypothetical protein 1950669 12848058 Q7A_1908 Methylophaga nitratireducenticrescens hypothetical protein YP_006296370.1 1950139 D 754476 CDS YP_006296371.1 387127766 12848059 complement(1950663..1952015) 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Sensor protein PhoQ 1952015 12848059 Q7A_1909 Methylophaga nitratireducenticrescens Sensor protein PhoQ YP_006296371.1 1950663 R 754476 CDS YP_006296372.1 387127767 12848060 complement(1952008..1952685) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein 1952685 12848060 Q7A_1910 Methylophaga nitratireducenticrescens two-component system regulatory protein YP_006296372.1 1952008 R 754476 CDS YP_006296373.1 387127768 12848061 complement(1952688..1952978) 1 NC_017857.1 hypothetical protein 1952978 12848061 Q7A_1911 Methylophaga nitratireducenticrescens hypothetical protein YP_006296373.1 1952688 R 754476 CDS YP_006296374.1 387127769 12848062 complement(1953046..1953207) 1 NC_017857.1 hypothetical protein 1953207 12848062 Q7A_1912 Methylophaga nitratireducenticrescens hypothetical protein YP_006296374.1 1953046 R 754476 CDS YP_006296375.1 387127770 12848063 complement(1953710..1957597) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA; hypothetical protein 1957597 12848063 Q7A_1913 Methylophaga nitratireducenticrescens hypothetical protein YP_006296375.1 1953710 R 754476 CDS YP_006296376.1 387127771 12848064 complement(1957733..1958698) 1 NC_017857.1 PFAM: Protein of unknown function, DUF481; salt-induced outer membrane protein 1958698 12848064 Q7A_1914 Methylophaga nitratireducenticrescens salt-induced outer membrane protein YP_006296376.1 1957733 R 754476 CDS YP_006296377.1 387127772 12848065 complement(1958888..1959352) 1 NC_017857.1 PFAM: Pentapeptide repeats (8 copies); pentapeptide repeat-containing protein 1959352 12848065 Q7A_1915 Methylophaga nitratireducenticrescens pentapeptide repeat-containing protein YP_006296377.1 1958888 R 754476 CDS YP_006296378.1 387127773 12848066 complement(1959384..1959977) 1 NC_017857.1 PFAM: Nitroreductase family; nitroreductase 1959977 12848066 Q7A_1916 Methylophaga nitratireducenticrescens nitroreductase YP_006296378.1 1959384 R 754476 CDS YP_006296379.1 387127774 12848067 complement(1959996..1960289) 1 NC_017857.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; RNA binding protein 1960289 12848067 Q7A_1917 Methylophaga nitratireducenticrescens RNA binding protein YP_006296379.1 1959996 R 754476 CDS YP_006296380.1 387127775 12848068 1960339..1962573 1 NC_017857.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; 2-phospho-D-glycerate hydrolyase 1962573 12848068 Q7A_1918 Methylophaga nitratireducenticrescens 2-phospho-D-glycerate hydrolyase YP_006296380.1 1960339 D 754476 CDS YP_006296381.1 387127776 12848069 complement(1962565..1963317) 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning protein ParA 1963317 12848069 Q7A_1919 Methylophaga nitratireducenticrescens chromosome partitioning protein ParA YP_006296381.1 1962565 R 754476 CDS YP_006296382.1 387127777 12848070 complement(1963320..1965401) 1 NC_017857.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 1965401 12848070 Q7A_1920 Methylophaga nitratireducenticrescens polyphosphate kinase YP_006296382.1 1963320 R 754476 CDS YP_006296383.1 387127778 12848071 complement(1965539..1966018) 1 NC_017857.1 hypothetical protein 1966018 12848071 Q7A_1921 Methylophaga nitratireducenticrescens hypothetical protein YP_006296383.1 1965539 R 754476 CDS YP_006296384.1 387127779 12848072 1966017..1966490 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 1966490 12848072 Q7A_1922 Methylophaga nitratireducenticrescens hypothetical protein YP_006296384.1 1966017 D 754476 CDS YP_006296385.1 387127780 12848073 1966480..1966905 1 NC_017857.1 hypothetical protein 1966905 12848073 Q7A_1923 Methylophaga nitratireducenticrescens hypothetical protein YP_006296385.1 1966480 D 754476 CDS YP_006296386.1 387127781 12848074 1967223..1968596 1 NC_017857.1 PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase 1968596 12848074 Q7A_1924 Methylophaga nitratireducenticrescens aspartyl aminopeptidase YP_006296386.1 1967223 D 754476 CDS YP_006296387.1 387127782 12848075 1968617..1968901 1 NC_017857.1 hypothetical protein 1968901 12848075 Q7A_1925 Methylophaga nitratireducenticrescens hypothetical protein YP_006296387.1 1968617 D 754476 CDS YP_006296388.1 387127783 12848076 1968918..1969640 1 NC_017857.1 hypothetical protein 1969640 12848076 Q7A_1926 Methylophaga nitratireducenticrescens hypothetical protein YP_006296388.1 1968918 D 754476 CDS YP_006296389.1 387127784 12848077 1969682..1970281 1 NC_017857.1 methyltransferase 1970281 12848077 Q7A_1927 Methylophaga nitratireducenticrescens methyltransferase YP_006296389.1 1969682 D 754476 CDS YP_006296390.1 387127785 12848078 complement(1970271..1970849) 1 NC_017857.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 1970849 12848078 Q7A_1928 Methylophaga nitratireducenticrescens hypothetical protein YP_006296390.1 1970271 R 754476 CDS YP_006296391.1 387127786 12848079 1970961..1973819 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; RNA polymerase 1973819 12848079 Q7A_1929 Methylophaga nitratireducenticrescens RNA polymerase YP_006296391.1 1970961 D 754476 CDS YP_006296392.1 387127787 12848080 1973860..1975092 1 NC_017857.1 TIGRFAM: RND family efflux transporter, MFP subunit; Secretion protein HlyD 1975092 12848080 Q7A_1930 Methylophaga nitratireducenticrescens Secretion protein HlyD YP_006296392.1 1973860 D 754476 CDS YP_006296393.1 387127788 12848081 1975085..1978222 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; RND multidrug efflux transporter 1978222 12848081 Q7A_1931 Methylophaga nitratireducenticrescens RND multidrug efflux transporter YP_006296393.1 1975085 D 754476 CDS YP_006296394.1 387127789 12848082 1978233..1979453 1 NC_017857.1 PFAM: Outer membrane efflux protein; outer membrane efflux protein 1979453 12848082 Q7A_1932 Methylophaga nitratireducenticrescens outer membrane efflux protein YP_006296394.1 1978233 D 754476 CDS YP_006296395.1 387127790 12848083 complement(1979469..1980137) 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF920); hypothetical protein 1980137 12848083 Q7A_1933 Methylophaga nitratireducenticrescens hypothetical protein YP_006296395.1 1979469 R 754476 CDS YP_006296396.1 387127791 12848084 complement(1980141..1982174) 1 NC_017857.1 PFAM: EAL domain; HAMP domain; GGDEF domain; hypothetical protein 1982174 12848084 Q7A_1934 Methylophaga nitratireducenticrescens hypothetical protein YP_006296396.1 1980141 R 754476 CDS YP_006296397.1 387127792 12848085 1982259..1983173 1 NC_017857.1 PFAM: Membrane transport protein; permease 1983173 12848085 Q7A_1935 Methylophaga nitratireducenticrescens permease YP_006296397.1 1982259 D 754476 CDS YP_006296398.1 387127793 12848086 complement(1983158..1983904) 1 NC_017857.1 PFAM: Probable molybdopterin binding domain; molybdopterin binding domain-containing protein 1983904 12848086 Q7A_1936 Methylophaga nitratireducenticrescens molybdopterin binding domain-containing protein YP_006296398.1 1983158 R 754476 CDS YP_006296399.1 387127794 12848087 complement(1983907..1984302) 1 NC_017857.1 PFAM: Bacterial-like globin; hypothetical protein 1984302 12848087 Q7A_1937 Methylophaga nitratireducenticrescens hypothetical protein YP_006296399.1 1983907 R 754476 CDS YP_006296400.1 387127795 12848088 1984435..1984986 1 NC_017857.1 PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde activating enzyme 1984986 12848088 Q7A_1938 Methylophaga nitratireducenticrescens formaldehyde activating enzyme YP_006296400.1 1984435 D 754476 CDS YP_006296401.1 387127796 12848089 1985130..1985249 1 NC_017857.1 hypothetical protein 1985249 12848089 Q7A_1939 Methylophaga nitratireducenticrescens hypothetical protein YP_006296401.1 1985130 D 754476 CDS YP_006296402.1 387127797 12848090 1985405..1985905 1 NC_017857.1 hypothetical protein 1985905 12848090 Q7A_1940 Methylophaga nitratireducenticrescens hypothetical protein YP_006296402.1 1985405 D 754476 CDS YP_006296403.1 387127798 12848091 1985945..1987867 1 NC_017857.1 PFAM: DEAD_2; dinG family ATP-dependent helicase YoaA 1987867 12848091 Q7A_1941 Methylophaga nitratireducenticrescens dinG family ATP-dependent helicase YoaA YP_006296403.1 1985945 D 754476 CDS YP_006296404.1 387127799 12848092 complement(1987900..1988283) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2237); hypothetical protein 1988283 12848092 Q7A_1942 Methylophaga nitratireducenticrescens hypothetical protein YP_006296404.1 1987900 R 754476 CDS YP_006296405.1 387127800 12848093 complement(1988286..1988672) 1 NC_017857.1 PFAM: Pterin 4 alpha carbinolamine dehydratase; Pterin-4-alpha-carbinolamine dehydratase 1988672 12848093 Q7A_1943 Methylophaga nitratireducenticrescens Pterin-4-alpha-carbinolamine dehydratase YP_006296405.1 1988286 R 754476 CDS YP_006296406.1 387127801 12848094 complement(1988725..1989009) 1 NC_017857.1 hypothetical protein 1989009 12848094 Q7A_1944 Methylophaga nitratireducenticrescens hypothetical protein YP_006296406.1 1988725 R 754476 CDS YP_006296407.1 387127802 12848095 complement(1989431..1990471) 1 NC_017857.1 PFAM: Phage integrase family; phage integrase family protein 1990471 12848095 Q7A_1945 Methylophaga nitratireducenticrescens phage integrase family protein YP_006296407.1 1989431 R 754476 CDS YP_006296408.1 387127803 12848096 complement(1990481..1992025) 1 NC_017857.1 hypothetical protein 1992025 12848096 Q7A_1946 Methylophaga nitratireducenticrescens hypothetical protein YP_006296408.1 1990481 R 754476 CDS YP_006296409.1 387127804 12848097 complement(1992035..1992994) 1 NC_017857.1 hypothetical protein 1992994 12848097 Q7A_1947 Methylophaga nitratireducenticrescens hypothetical protein YP_006296409.1 1992035 R 754476 CDS YP_006296410.1 387127805 12848098 complement(1993003..1994853) 1 NC_017857.1 PFAM: Integrase core domain; integrase family protein 1994853 12848098 Q7A_1948 Methylophaga nitratireducenticrescens integrase family protein YP_006296410.1 1993003 R 754476 CDS YP_006296411.1 387127806 12848099 complement(1994893..1995603) 1 NC_017857.1 hypothetical protein 1995603 12848099 Q7A_1949 Methylophaga nitratireducenticrescens hypothetical protein YP_006296411.1 1994893 R 754476 CDS YP_006296412.1 387127807 12848100 1996023..1996304 1 NC_017857.1 hypothetical protein 1996304 12848100 Q7A_1950 Methylophaga nitratireducenticrescens hypothetical protein YP_006296412.1 1996023 D 754476 CDS YP_006296413.1 387127808 12848101 complement(1996606..1997391) 1 NC_017857.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; inaA protein 1997391 12848101 Q7A_1951 Methylophaga nitratireducenticrescens inaA protein YP_006296413.1 1996606 R 754476 CDS YP_006296414.1 387127809 12848102 complement(1997385..1998074) 1 NC_017857.1 PFAM: Methyltransferase domain; SAM-dependent methyltransferase 1998074 12848102 Q7A_1952 Methylophaga nitratireducenticrescens SAM-dependent methyltransferase YP_006296414.1 1997385 R 754476 CDS YP_006296415.1 387127810 12848103 complement(1998392..2000353) 1 NC_017857.1 PFAM: Sulfatase; phosphoglycerol transferase I 2000353 12848103 Q7A_1953 Methylophaga nitratireducenticrescens phosphoglycerol transferase I YP_006296415.1 1998392 R 754476 CDS YP_006296416.1 387127811 12848104 2000679..2000864 1 NC_017857.1 PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 2000864 12848104 Q7A_1954 Methylophaga nitratireducenticrescens diacylglycerol kinase YP_006296416.1 2000679 D 754476 CDS YP_006296417.1 387127812 12848105 2000858..2001550 1 NC_017857.1 PFAM: PAP2 superfamily; PAP2 (acid phosphatase) superfamily protein 2001550 12848105 Q7A_1955 Methylophaga nitratireducenticrescens PAP2 (acid phosphatase) superfamily protein YP_006296417.1 2000858 D 754476 CDS YP_006296418.1 387127813 12848106 2001579..2002247 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two component transcriptional regulator 2002247 12848106 Q7A_1956 Methylophaga nitratireducenticrescens two component transcriptional regulator YP_006296418.1 2001579 D 754476 CDS YP_006296419.1 387127814 12848107 2002237..2003616 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2003616 12848107 Q7A_1957 Methylophaga nitratireducenticrescens integral membrane sensor signal transduction histidine kinase YP_006296419.1 2002237 D 754476 CDS YP_006296420.1 387127815 12848108 2003684..2005321 1 NC_017857.1 PFAM: Sulfatase; Domain of unknown function (DUF1705); phosphoethanolamine transferase EptA 2005321 12848108 Q7A_1958 Methylophaga nitratireducenticrescens phosphoethanolamine transferase EptA YP_006296420.1 2003684 D 754476 CDS YP_006296421.1 387127816 12848109 complement(2005814..2006116) 1 NC_017857.1 hypothetical protein 2006116 12848109 Q7A_1959 Methylophaga nitratireducenticrescens hypothetical protein YP_006296421.1 2005814 R 754476 CDS YP_006296422.1 387127817 12848110 complement(2006311..2006424) 1 NC_017857.1 hypothetical protein 2006424 12848110 Q7A_1960 Methylophaga nitratireducenticrescens hypothetical protein YP_006296422.1 2006311 R 754476 CDS YP_006296423.1 387127818 12848111 2006593..2011239 1 NC_017857.1 PFAM: Putative serine esterase (DUF676); serine esterase 2011239 12848111 Q7A_1961 Methylophaga nitratireducenticrescens serine esterase YP_006296423.1 2006593 D 754476 CDS YP_006296424.1 387127819 12848112 2011236..2013134 1 NC_017857.1 hypothetical protein 2013134 12848112 Q7A_1962 Methylophaga nitratireducenticrescens hypothetical protein YP_006296424.1 2011236 D 754476 CDS YP_006296425.1 387127820 12848113 2013225..2013437 1 NC_017857.1 PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family; hypothetical protein 2013437 12848113 Q7A_1963 Methylophaga nitratireducenticrescens hypothetical protein YP_006296425.1 2013225 D 754476 CDS YP_006296426.1 387127821 12848114 complement(2013781..2013894) 1 NC_017857.1 hypothetical protein 2013894 12848114 Q7A_1964 Methylophaga nitratireducenticrescens hypothetical protein YP_006296426.1 2013781 R 754476 CDS YP_006296427.1 387127822 12848115 complement(2013967..2017416) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit; type I restriction-modification system, restriction subunit R 2017416 12848115 Q7A_1965 Methylophaga nitratireducenticrescens type I restriction-modification system, restriction subunit R YP_006296427.1 2013967 R 754476 CDS YP_006296428.1 387127823 12848116 complement(2017446..2018168) 1 NC_017857.1 PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 2018168 12848116 Q7A_1966 Methylophaga nitratireducenticrescens type I restriction-modification system, specificity subunit S YP_006296428.1 2017446 R 754476 CDS YP_006296429.1 387127824 12848117 complement(2018273..2018635) 1 NC_017857.1 PFAM: Type I restriction modification DNA specificity domain; Restriction endonuclease S subunit 2018635 12848117 Q7A_1967 Methylophaga nitratireducenticrescens Restriction endonuclease S subunit YP_006296429.1 2018273 R 754476 CDS YP_006296430.1 387127825 12848118 complement(2018635..2020116) 1 NC_017857.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system, DNA-methyltransferase subunit M 2020116 12848118 Q7A_1968 Methylophaga nitratireducenticrescens type I restriction-modification system, DNA-methyltransferase subunit M YP_006296430.1 2018635 R 754476 CDS YP_006296431.1 387127826 12848119 2020539..2022668 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; anaerobic dehydrogenase 2022668 12848119 Q7A_1969 Methylophaga nitratireducenticrescens anaerobic dehydrogenase YP_006296431.1 2020539 D 754476 CDS YP_006296432.1 387127827 12848120 2022700..2023005 1 NC_017857.1 PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 2023005 12848120 Q7A_1970 Methylophaga nitratireducenticrescens 4Fe-4S ferredoxin YP_006296432.1 2022700 D 754476 CDS YP_006296433.1 387127828 12848121 2023023..2024399 1 NC_017857.1 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type 2024399 12848121 Q7A_1971 Methylophaga nitratireducenticrescens Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type YP_006296433.1 2023023 D 754476 CDS YP_006296434.1 387127829 12848122 complement(2024486..2024662) 1 NC_017857.1 hypothetical protein 2024662 12848122 Q7A_1972 Methylophaga nitratireducenticrescens hypothetical protein YP_006296434.1 2024486 R 754476 CDS YP_006296435.1 387127830 12848123 2024820..2026598 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; methanol dehydrogenase large subunit protein 2026598 12848123 Q7A_1973 Methylophaga nitratireducenticrescens methanol dehydrogenase large subunit protein YP_006296435.1 2024820 D 754476 CDS YP_006296436.1 387127831 12848124 2027059..2028249 1 NC_017857.1 PFAM: Oxidoreductase FAD-binding domain; Globin; Oxidoreductase NAD-binding domain; flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) 2028249 12848124 Q7A_1974 Methylophaga nitratireducenticrescens flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) YP_006296436.1 2027059 D 754476 CDS YP_006296437.1 387127832 12848125 2028363..2028671 1 NC_017857.1 hypothetical protein 2028671 12848125 Q7A_1975 Methylophaga nitratireducenticrescens hypothetical protein YP_006296437.1 2028363 D 754476 CDS YP_006296438.1 387127833 12848126 complement(2028674..2029363) 1 NC_017857.1 hypothetical protein 2029363 12848126 Q7A_1976 Methylophaga nitratireducenticrescens hypothetical protein YP_006296438.1 2028674 R 754476 CDS YP_006296439.1 387127834 12848127 complement(2029356..2030138) 1 NC_017857.1 iron permease 2030138 12848127 Q7A_1977 Methylophaga nitratireducenticrescens iron permease YP_006296439.1 2029356 R 754476 CDS YP_006296440.1 387127835 12848128 complement(2030141..2030479) 1 NC_017857.1 hypothetical protein 2030479 12848128 Q7A_1978 Methylophaga nitratireducenticrescens hypothetical protein YP_006296440.1 2030141 R 754476 CDS YP_006296441.1 387127836 12848129 complement(2030476..2031801) 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; sensor histidine kinase 2031801 12848129 Q7A_1979 Methylophaga nitratireducenticrescens sensor histidine kinase YP_006296441.1 2030476 R 754476 CDS YP_006296442.1 387127837 12848130 complement(2031798..2032457) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system response regulator QseB 2032457 12848130 Q7A_1980 Methylophaga nitratireducenticrescens two-component system response regulator QseB YP_006296442.1 2031798 R 754476 CDS YP_006296443.1 387127838 12848131 complement(2032438..2033106) 1 NC_017857.1 hypothetical protein 2033106 12848131 Q7A_1981 Methylophaga nitratireducenticrescens hypothetical protein YP_006296443.1 2032438 R 754476 CDS YP_006296444.1 387127839 12848132 complement(2033103..2033915) 1 NC_017857.1 PFAM: short chain dehydrogenase; Oxidoreductase 2033915 12848132 Q7A_1982 Methylophaga nitratireducenticrescens Oxidoreductase YP_006296444.1 2033103 R 754476 CDS YP_006296445.1 387127840 12848133 complement(2033912..2034559) 1 NC_017857.1 PFAM: TENA/THI-4/PQQC family; long-chain acyl-CoA synthetase 2034559 12848133 Q7A_1983 Methylophaga nitratireducenticrescens long-chain acyl-CoA synthetase YP_006296445.1 2033912 R 754476 CDS YP_006296446.1 387127841 12848134 complement(2034546..2036024) 1 NC_017857.1 PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 2036024 12848134 Q7A_1984 Methylophaga nitratireducenticrescens long-chain-fatty-acid--CoA ligase YP_006296446.1 2034546 R 754476 CDS YP_006296447.1 387127842 12848135 complement(2036021..2036716) 1 NC_017857.1 PFAM: Thermostable hemolysin; thermostable hemolysin 2036716 12848135 Q7A_1985 Methylophaga nitratireducenticrescens thermostable hemolysin YP_006296447.1 2036021 R 754476 CDS YP_006296448.1 387127843 12848136 complement(2036909..2037121) 1 NC_017857.1 proline dehydrogenase 2037121 12848136 Q7A_1986 Methylophaga nitratireducenticrescens proline dehydrogenase YP_006296448.1 2036909 R 754476 CDS YP_006296449.1 387127844 12848137 2037338..2039086 1 NC_017857.1 PFAM: Sulfate transporter family; Citrate transporter; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate permease 2039086 12848137 Q7A_1987 Methylophaga nitratireducenticrescens sulfate permease YP_006296449.1 2037338 D 754476 CDS YP_006296450.1 387127845 12848138 complement(2039243..2041243) 1 NC_017857.1 PFAM: Sulfatase; phosphoglycerol transferase I 2041243 12848138 Q7A_1988 Methylophaga nitratireducenticrescens phosphoglycerol transferase I YP_006296450.1 2039243 R 754476 CDS YP_006296451.1 387127846 12848139 complement(2041219..2041539) 1 NC_017857.1 PFAM: Prokaryotic diacylglycerol kinase; diacylglycerol kinase 2041539 12848139 Q7A_1989 Methylophaga nitratireducenticrescens diacylglycerol kinase YP_006296451.1 2041219 R 754476 CDS YP_006296452.1 387127847 12848140 complement(2042238..2043209) 1 NC_017857.1 PFAM: Glutathione S-transferase, C-terminal domain; glutathione S-transferase, omega 2043209 12848140 Q7A_1990 Methylophaga nitratireducenticrescens glutathione S-transferase, omega YP_006296452.1 2042238 R 754476 CDS YP_006296453.1 387127848 12848141 2043288..2043689 1 NC_017857.1 hypothetical protein 2043689 12848141 Q7A_1991 Methylophaga nitratireducenticrescens hypothetical protein YP_006296453.1 2043288 D 754476 CDS YP_006296454.1 387127849 12848142 2043745..2046264 1 NC_017857.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecD 2046264 12848142 Q7A_1992 Methylophaga nitratireducenticrescens protein-export membrane protein SecD YP_006296454.1 2043745 D 754476 CDS YP_006296455.1 387127850 12848143 2046350..2047405 1 NC_017857.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; inner membrane protein YrbG 2047405 12848143 Q7A_1993 Methylophaga nitratireducenticrescens inner membrane protein YrbG YP_006296455.1 2046350 D 754476 CDS YP_006296456.1 387127851 12848144 complement(2047463..2048488) 1 NC_017857.1 PFAM: Peptidase family M48; Zn-dependent protease with chaperone function 2048488 12848144 Q7A_1994 Methylophaga nitratireducenticrescens Zn-dependent protease with chaperone function YP_006296456.1 2047463 R 754476 CDS YP_006296457.1 387127852 12848145 complement(2048491..2049069) 1 NC_017857.1 PFAM: LemA family; LemA protein 2049069 12848145 Q7A_1995 Methylophaga nitratireducenticrescens LemA protein YP_006296457.1 2048491 R 754476 CDS YP_006296458.1 387127853 12848146 2049216..2049350 1 NC_017857.1 hypothetical protein 2049350 12848146 Q7A_1996 Methylophaga nitratireducenticrescens hypothetical protein YP_006296458.1 2049216 D 754476 CDS YP_006296459.1 387127854 12848147 2049393..2051051 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ABC transporter ATP-binding protein 2051051 12848147 Q7A_1997 Methylophaga nitratireducenticrescens ABC transporter ATP-binding protein YP_006296459.1 2049393 D 754476 CDS YP_006296460.1 387127855 12848148 complement(2051683..2052498) 1 NC_017857.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2052498 12848148 Q7A_1998 Methylophaga nitratireducenticrescens transposase YP_006296460.1 2051683 R 754476 CDS YP_006296461.1 387127856 12848149 complement(2052815..2054515) 1 NC_017857.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; sulfite reductase (NADPH) hemoprotein beta-component 2054515 12848149 Q7A_1999 Methylophaga nitratireducenticrescens sulfite reductase (NADPH) hemoprotein beta-component YP_006296461.1 2052815 R 754476 CDS YP_006296462.1 387127857 12848150 complement(2054515..2056314) 1 NC_017857.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; sulfite reductase (NADPH) flavoprotein alpha-component 2056314 12848150 Q7A_2000 Methylophaga nitratireducenticrescens sulfite reductase (NADPH) flavoprotein alpha-component YP_006296462.1 2054515 R 754476 CDS YP_006296463.1 387127858 12848151 complement(2056588..2058732) 1 NC_017857.1 PFAM: EAL domain; GAF domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2058732 12848151 Q7A_2001 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296463.1 2056588 R 754476 CDS YP_006296464.1 387127859 12848152 complement(2058790..2062641) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; sensor histidine kinase with a response regulator receiver domain 2062641 12848152 Q7A_2002 Methylophaga nitratireducenticrescens sensor histidine kinase with a response regulator receiver domain YP_006296464.1 2058790 R 754476 CDS YP_006296465.1 387127860 12848153 complement(2062767..2064641) 1 NC_017857.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2064641 12848153 Q7A_2003 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006296465.1 2062767 R 754476 CDS YP_006296466.1 387127861 12848154 complement(2064742..2065377) 1 NC_017857.1 PFAM: GDSL-like Lipase/Acylhydrolase; lipolytic protein 2065377 12848154 Q7A_2004 Methylophaga nitratireducenticrescens lipolytic protein YP_006296466.1 2064742 R 754476 CDS YP_006296467.1 387127862 12848155 complement(2065377..2066156) 1 NC_017857.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; deoxyribonuclease 2066156 12848155 Q7A_2005 Methylophaga nitratireducenticrescens deoxyribonuclease YP_006296467.1 2065377 R 754476 CDS YP_006296468.1 387127863 12848156 complement(2066194..2066475) 1 NC_017857.1 PFAM: PilZ domain; type IV pilus assembly protein PilZ 2066475 12848156 Q7A_2006 Methylophaga nitratireducenticrescens type IV pilus assembly protein PilZ YP_006296468.1 2066194 R 754476 CDS YP_006296469.1 387127864 12848157 2066482..2066595 1 NC_017857.1 hypothetical protein 2066595 12848157 Q7A_2007 Methylophaga nitratireducenticrescens hypothetical protein YP_006296469.1 2066482 D 754476 CDS YP_006296470.1 387127865 12848158 complement(2066581..2067543) 1 NC_017857.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' 2067543 12848158 Q7A_2008 Methylophaga nitratireducenticrescens DNA polymerase III subunit delta' YP_006296470.1 2066581 R 754476 CDS YP_006296471.1 387127866 12848159 complement(2067543..2068175) 1 NC_017857.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 2068175 12848159 Q7A_2009 Methylophaga nitratireducenticrescens thymidylate kinase YP_006296471.1 2067543 R 754476 CDS YP_006296472.1 387127867 12848160 complement(2068172..2069197) 1 NC_017857.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; YceG-like protein 2069197 12848160 Q7A_2010 Methylophaga nitratireducenticrescens YceG-like protein YP_006296472.1 2068172 R 754476 CDS YP_006296473.1 387127868 12848161 complement(2069194..2070024) 1 NC_017857.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; Aminodeoxychorismate lyase 2070024 12848161 Q7A_2011 Methylophaga nitratireducenticrescens Aminodeoxychorismate lyase YP_006296473.1 2069194 R 754476 CDS YP_006296474.1 387127869 12848162 complement(2070035..2071276) 1 NC_017857.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase 2071276 12848162 Q7A_2012 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP synthase YP_006296474.1 2070035 R 754476 CDS YP_006296475.1 387127870 12848163 complement(2071371..2071607) 1 NC_017857.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2071607 12848163 Q7A_2013 Methylophaga nitratireducenticrescens acyl carrier protein YP_006296475.1 2071371 R 754476 CDS YP_006296476.1 387127871 12848164 complement(2071745..2072488) 1 NC_017857.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 2072488 12848164 Q7A_2014 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP reductase YP_006296476.1 2071745 R 754476 CDS YP_006296477.1 387127872 12848165 complement(2072485..2073426) 1 NC_017857.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2073426 12848165 Q7A_2015 Methylophaga nitratireducenticrescens malonyl CoA-acyl carrier protein transacylase YP_006296477.1 2072485 R 754476 CDS YP_006296478.1 387127873 12848166 complement(2073445..2074404) 1 NC_017857.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase 2074404 12848166 Q7A_2016 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP synthase YP_006296478.1 2073445 R 754476 CDS YP_006296479.1 387127874 12848167 complement(2074401..2075393) 1 NC_017857.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-ACP acyltransferase PlsX 2075393 12848167 Q7A_2017 Methylophaga nitratireducenticrescens phosphate:acyl-ACP acyltransferase PlsX YP_006296479.1 2074401 R 754476 CDS YP_006296480.1 387127875 12848168 complement(2075434..2075613) 1 NC_017857.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 2075613 12848168 Q7A_2018 Methylophaga nitratireducenticrescens 50S ribosomal protein L32 YP_006296480.1 2075434 R 754476 CDS YP_006296481.1 387127876 12848169 complement(2075648..2076205) 1 NC_017857.1 PFAM: Uncharacterized ACR, COG1399; hypothetical protein 2076205 12848169 Q7A_2019 Methylophaga nitratireducenticrescens hypothetical protein YP_006296481.1 2075648 R 754476 CDS YP_006296482.1 387127877 12845601 complement(2076274..2077782) 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; Amidophosphoribosyltransferase 2077782 12845601 Q7A_2020 Methylophaga nitratireducenticrescens Amidophosphoribosyltransferase YP_006296482.1 2076274 R 754476 CDS YP_006296483.1 387127878 12845602 complement(2077803..2078294) 1 NC_017857.1 PFAM: Colicin V production protein; colicin V production protein 2078294 12845602 Q7A_2021 Methylophaga nitratireducenticrescens colicin V production protein YP_006296483.1 2077803 R 754476 CDS YP_006296484.1 387127879 12845603 complement(2078402..2079094) 1 NC_017857.1 PFAM: Sporulation related domain; sporulation domain-containing protein 2079094 12845603 Q7A_2022 Methylophaga nitratireducenticrescens sporulation domain-containing protein YP_006296484.1 2078402 R 754476 CDS YP_006296485.1 387127880 12845604 complement(2079125..2081560) 1 NC_017857.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La; ATP-dependent protease La 2081560 12845604 Q7A_2023 Methylophaga nitratireducenticrescens ATP-dependent protease La YP_006296485.1 2079125 R 754476 CDS YP_006296486.1 387127881 12845605 complement(2081851..2082936) 1 NC_017857.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 2082936 12845605 Q7A_2024 Methylophaga nitratireducenticrescens ATP-dependent Clp protease ATP-binding subunit ClpX YP_006296486.1 2081851 R 754476 CDS YP_006296487.1 387127882 12845606 complement(2083151..2083786) 1 NC_017857.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 2083786 12845606 Q7A_2025 Methylophaga nitratireducenticrescens ATP-dependent Clp protease proteolytic subunit YP_006296487.1 2083151 R 754476 CDS YP_006296488.1 387127883 12845607 complement(2083875..2085173) 1 NC_017857.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; cell division trigger factor 2085173 12845607 Q7A_2026 Methylophaga nitratireducenticrescens cell division trigger factor YP_006296488.1 2083875 R 754476 CDS YP_006296489.1 387127884 12845609 complement(2085389..2086831) 1 NC_017857.1 PFAM: HDOD domain; GAF-domain containing protein 2086831 12845609 Q7A_2028 Methylophaga nitratireducenticrescens GAF-domain containing protein YP_006296489.1 2085389 R 754476 CDS YP_006296490.1 387127885 12845610 complement(2086828..2087751) 1 NC_017857.1 PFAM: 5'-nucleotidase; 5'-nucleotidase 2087751 12845610 Q7A_2029 Methylophaga nitratireducenticrescens 5'-nucleotidase YP_006296490.1 2086828 R 754476 CDS YP_006296491.1 387127886 12845611 complement(2087757..2088344) 1 NC_017857.1 PFAM: Nuclease-related domain; nuclease-like protein 2088344 12845611 Q7A_2030 Methylophaga nitratireducenticrescens nuclease-like protein YP_006296491.1 2087757 R 754476 CDS YP_006296492.1 387127887 12845612 complement(2088382..2089290) 1 NC_017857.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Cobalt-zinc-cadmium resistance protein 2089290 12845612 Q7A_2031 Methylophaga nitratireducenticrescens Cobalt-zinc-cadmium resistance protein YP_006296492.1 2088382 R 754476 CDS YP_006296493.1 387127888 12845613 2089381..2091012 1 NC_017857.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase 2091012 12845613 Q7A_2032 Methylophaga nitratireducenticrescens phosphoglucomutase YP_006296493.1 2089381 D 754476 CDS YP_006296494.1 387127889 12845614 2091027..2091632 1 NC_017857.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; maf-like protein 2091632 12845614 Q7A_2033 Methylophaga nitratireducenticrescens maf-like protein YP_006296494.1 2091027 D 754476 CDS YP_006296495.1 387127890 12845615 complement(2091626..2092027) 1 NC_017857.1 hypothetical protein 2092027 12845615 Q7A_2034 Methylophaga nitratireducenticrescens hypothetical protein YP_006296495.1 2091626 R 754476 CDS YP_006296496.1 387127891 12845616 2092189..2093178 1 NC_017857.1 PFAM: Phosphotransferase enzyme family; phosphotransferase 2093178 12845616 Q7A_2035 Methylophaga nitratireducenticrescens phosphotransferase YP_006296496.1 2092189 D 754476 CDS YP_006296497.1 387127892 12845617 2093175..2093870 1 NC_017857.1 PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 2093870 12845617 Q7A_2036 Methylophaga nitratireducenticrescens glucose-1-phosphate thymidylyltransferase YP_006296497.1 2093175 D 754476 CDS YP_006296498.1 387127893 12845618 complement(2093847..2094743) 1 NC_017857.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 2094743 12845618 Q7A_2037 Methylophaga nitratireducenticrescens ornithine carbamoyltransferase YP_006296498.1 2093847 R 754476 CDS YP_006296499.1 387127894 12845619 complement(2094745..2095944) 1 NC_017857.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases; acetylornithine aminotransferase 2095944 12845619 Q7A_2038 Methylophaga nitratireducenticrescens acetylornithine aminotransferase YP_006296499.1 2094745 R 754476 CDS YP_006296500.1 387127895 12845620 2095943..2096074 1 NC_017857.1 hypothetical protein 2096074 12845620 Q7A_2039 Methylophaga nitratireducenticrescens hypothetical protein YP_006296500.1 2095943 D 754476 CDS YP_006296501.1 387127896 12845621 complement(2096110..2096691) 1 NC_017857.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutase (Fe) 2096691 12845621 Q7A_2040 Methylophaga nitratireducenticrescens superoxide dismutase (Fe) YP_006296501.1 2096110 R 754476 CDS YP_006296502.1 387127897 12845622 complement(2096753..2097208) 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S18p-alanine acetyltransferase 2097208 12845622 Q7A_2041 Methylophaga nitratireducenticrescens ribosomal-protein-S18p-alanine acetyltransferase YP_006296502.1 2096753 R 754476 CDS YP_006296503.1 387127898 12845623 complement(2097225..2097719) 1 NC_017857.1 PFAM: DNA polymerase III psi subunit; DNA polymerase III psi subunit 2097719 12845623 Q7A_2042 Methylophaga nitratireducenticrescens DNA polymerase III psi subunit YP_006296503.1 2097225 R 754476 CDS YP_006296504.1 387127899 12845624 complement(2097719..2099251) 1 NC_017857.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 2099251 12845624 Q7A_2043 Methylophaga nitratireducenticrescens 2-isopropylmalate synthase YP_006296504.1 2097719 R 754476 CDS YP_006296505.1 387127900 12845625 complement(2099226..2099342) 1 NC_017857.1 hypothetical protein 2099342 12845625 Q7A_2044 Methylophaga nitratireducenticrescens hypothetical protein YP_006296505.1 2099226 R 754476 CDS YP_006296506.1 387127901 12845626 complement(2099418..2100161) 1 NC_017857.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 2100161 12845626 Q7A_2045 Methylophaga nitratireducenticrescens CDP-diacylglycerol--serine O-phosphatidyltransferase YP_006296506.1 2099418 R 754476 CDS YP_006296507.1 387127902 12845627 complement(2100279..2101295) 1 NC_017857.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 2101295 12845627 Q7A_2046 Methylophaga nitratireducenticrescens ketol-acid reductoisomerase YP_006296507.1 2100279 R 754476 CDS YP_006296508.1 387127903 12845628 complement(2101318..2101815) 1 NC_017857.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit 2101815 12845628 Q7A_2047 Methylophaga nitratireducenticrescens acetolactate synthase small subunit YP_006296508.1 2101318 R 754476 CDS YP_006296509.1 387127904 12845629 complement(2101815..2103557) 1 NC_017857.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 2103557 12845629 Q7A_2048 Methylophaga nitratireducenticrescens acetolactate synthase large subunit YP_006296509.1 2101815 R 754476 CDS YP_006296510.1 387127905 12845630 2103858..2104775 1 NC_017857.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type; dihydroorotase 2104775 12845630 Q7A_2049 Methylophaga nitratireducenticrescens dihydroorotase YP_006296510.1 2103858 D 754476 CDS YP_006296511.1 387127906 12845632 2106233..2106910 1 NC_017857.1 PFAM: DJ-1/PfpI family; thiJ/PfpI family protein 2106910 12845632 Q7A_2052 Methylophaga nitratireducenticrescens thiJ/PfpI family protein YP_006296511.1 2106233 D 754476 CDS YP_006296512.1 387127907 12845633 2106944..2107225 1 NC_017857.1 PFAM: PPIC-type PPIASE domain; peptidyl-prolyl cis-trans isomerase ppiC 2107225 12845633 Q7A_2053 Methylophaga nitratireducenticrescens peptidyl-prolyl cis-trans isomerase ppiC YP_006296512.1 2106944 D 754476 CDS YP_006296513.1 387127908 12845634 complement(2107269..2109347) 1 NC_017857.1 PFAM: DEAD_2; DEAD/DEAH box helicase; ATP-dependent helicase DinG/Rad3 2109347 12845634 Q7A_2054 Methylophaga nitratireducenticrescens ATP-dependent helicase DinG/Rad3 YP_006296513.1 2107269 R 754476 CDS YP_006296514.1 387127909 12845635 complement(2109348..2110349) 1 NC_017857.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-lactate dehydrogenase 2110349 12845635 Q7A_2055 Methylophaga nitratireducenticrescens D-lactate dehydrogenase YP_006296514.1 2109348 R 754476 CDS YP_006296515.1 387127910 12845636 2110432..2111382 1 NC_017857.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family; Tagatose-6-phosphate kinase / 1-phosphofructokinase 2111382 12845636 Q7A_2056 Methylophaga nitratireducenticrescens Tagatose-6-phosphate kinase / 1-phosphofructokinase YP_006296515.1 2110432 D 754476 CDS YP_006296516.1 387127911 12845637 complement(2111379..2113028) 1 NC_017857.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; ssDNA-specific exonuclease RecJ 2113028 12845637 Q7A_2057 Methylophaga nitratireducenticrescens ssDNA-specific exonuclease RecJ YP_006296516.1 2111379 R 754476 CDS YP_006296517.1 387127912 12845638 complement(2113100..2114038) 1 NC_017857.1 Regulatory protein, RpfE type 2114038 12845638 Q7A_2058 Methylophaga nitratireducenticrescens Regulatory protein, RpfE type YP_006296517.1 2113100 R 754476 CDS YP_006296518.1 387127913 12845639 complement(2114031..2114735) 1 NC_017857.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda; chromosomal replication initiator protein DnaA 2114735 12845639 Q7A_2059 Methylophaga nitratireducenticrescens chromosomal replication initiator protein DnaA YP_006296518.1 2114031 R 754476 CDS YP_006296519.1 387127914 12845640 complement(2114746..2115792) 1 NC_017857.1 PFAM: Domain of unknown function DUF20; permease 2115792 12845640 Q7A_2060 Methylophaga nitratireducenticrescens permease YP_006296519.1 2114746 R 754476 CDS YP_006296520.1 387127915 12845641 complement(2115789..2116274) 1 NC_017857.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2116274 12845641 Q7A_2061 Methylophaga nitratireducenticrescens CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006296520.1 2115789 R 754476 CDS YP_006296521.1 387127916 12845642 complement(2116343..2117383) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2066); hypothetical protein 2117383 12845642 Q7A_2062 Methylophaga nitratireducenticrescens hypothetical protein YP_006296521.1 2116343 R 754476 CDS YP_006296522.1 387127917 12845643 2117442..2118503 1 NC_017857.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; Phosphoribosylformylglycinamidine cyclo-ligase 2118503 12845643 Q7A_2063 Methylophaga nitratireducenticrescens Phosphoribosylformylglycinamidine cyclo-ligase YP_006296522.1 2117442 D 754476 CDS YP_006296523.1 387127918 12845644 2118500..2119084 1 NC_017857.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylglycinamide formyltransferase 2119084 12845644 Q7A_2064 Methylophaga nitratireducenticrescens Phosphoribosylglycinamide formyltransferase YP_006296523.1 2118500 D 754476 CDS YP_006296524.1 387127919 12845645 2119124..2119834 1 NC_017857.1 PFAM: Protein of unknown function (DUF3108); hypothetical protein 2119834 12845645 Q7A_2065 Methylophaga nitratireducenticrescens hypothetical protein YP_006296524.1 2119124 D 754476 CDS YP_006296525.1 387127920 12845646 2119860..2120462 1 NC_017857.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; ADP-ribose pyrophosphatase 2120462 12845646 Q7A_2066 Methylophaga nitratireducenticrescens ADP-ribose pyrophosphatase YP_006296525.1 2119860 D 754476 CDS YP_006296526.1 387127921 12845647 complement(2120506..2121414) 1 NC_017857.1 PFAM: Aldose 1-epimerase; aldose 1-epimerase 2121414 12845647 Q7A_2067 Methylophaga nitratireducenticrescens aldose 1-epimerase YP_006296526.1 2120506 R 754476 CDS YP_006296527.1 387127922 12845648 complement(2121485..2121967) 1 NC_017857.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 2121967 12845648 Q7A_2068 Methylophaga nitratireducenticrescens FKBP-type peptidyl-prolyl cis-trans isomerase SlyD YP_006296527.1 2121485 R 754476 CDS YP_006296528.1 387127923 12845649 complement(2121977..2122141) 1 NC_017857.1 hypothetical protein 2122141 12845649 Q7A_2069 Methylophaga nitratireducenticrescens hypothetical protein YP_006296528.1 2121977 R 754476 CDS YP_006296529.1 387127924 12845650 2123258..2123956 1 NC_017857.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase E 2123956 12845650 Q7A_2070 Methylophaga nitratireducenticrescens ribosomal large subunit pseudouridine synthase E YP_006296529.1 2123258 D 754476 CDS YP_006296530.1 387127925 12845651 2124012..2124254 1 NC_017857.1 NUDIX hydrolase 2124254 12845651 Q7A_2071 Methylophaga nitratireducenticrescens NUDIX hydrolase YP_006296530.1 2124012 D 754476 CDS YP_006296531.1 387127926 12845652 2124257..2125360 1 NC_017857.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 2125360 12845652 Q7A_2072 Methylophaga nitratireducenticrescens tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_006296531.1 2124257 D 754476 CDS YP_006296532.1 387127927 12845653 2125357..2125989 1 NC_017857.1 PFAM: Protein of unknown function (DUF489); hypothetical protein 2125989 12845653 Q7A_2073 Methylophaga nitratireducenticrescens hypothetical protein YP_006296532.1 2125357 D 754476 CDS YP_006296533.1 387127928 12845654 2126162..2127061 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 2127061 12845654 Q7A_2074 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296533.1 2126162 D 754476 CDS YP_006296534.1 387127929 12845655 complement(2127074..2129611) 1 NC_017857.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; aconitate hydratase 2 2129611 12845655 Q7A_2075 Methylophaga nitratireducenticrescens aconitate hydratase 2 YP_006296534.1 2127074 R 754476 CDS YP_006296535.1 387127930 12845656 2129750..2131117 1 NC_017857.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 2131117 12845656 Q7A_2076 Methylophaga nitratireducenticrescens adenylosuccinate lyase YP_006296535.1 2129750 D 754476 CDS YP_006296536.1 387127931 12845657 2131118..2131624 1 NC_017857.1 hypothetical protein 2131624 12845657 Q7A_2077 Methylophaga nitratireducenticrescens hypothetical protein YP_006296536.1 2131118 D 754476 CDS YP_006296537.1 387127932 12845658 2131621..2132403 1 NC_017857.1 secretion system protein 2132403 12845658 Q7A_2078 Methylophaga nitratireducenticrescens secretion system protein YP_006296537.1 2131621 D 754476 CDS YP_006296538.1 387127933 12845659 2132373..2133023 1 NC_017857.1 PFAM: Nitroreductase family; Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase 2133023 12845659 Q7A_2079 Methylophaga nitratireducenticrescens Oxygen-insensitive NAD(P)H nitroreductase / Dihydropteridine reductase YP_006296538.1 2132373 D 754476 CDS YP_006296539.1 387127934 12845660 complement(2133024..2134061) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2134061 12845660 Q7A_2080 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296539.1 2133024 R 754476 CDS YP_006296540.1 387127935 12845661 complement(2134086..2135294) 1 NC_017857.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 2135294 12845661 Q7A_2081 Methylophaga nitratireducenticrescens argininosuccinate synthase YP_006296540.1 2134086 R 754476 CDS YP_006296541.1 387127936 12845662 complement(2135346..2136131) 1 NC_017857.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); methyl-directed repair DNA adenine methylase 2136131 12845662 Q7A_2082 Methylophaga nitratireducenticrescens methyl-directed repair DNA adenine methylase YP_006296541.1 2135346 R 754476 CDS YP_006296542.1 387127937 12845663 complement(2136243..2138036) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex 2138036 12845663 Q7A_2083 Methylophaga nitratireducenticrescens dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex YP_006296542.1 2136243 R 754476 CDS YP_006296543.1 387127938 12845664 complement(2138033..2139352) 1 NC_017857.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 2139352 12845664 Q7A_2084 Methylophaga nitratireducenticrescens dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex YP_006296543.1 2138033 R 754476 CDS YP_006296544.1 387127939 12845665 complement(2139356..2142010) 1 NC_017857.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type; pyruvate dehydrogenase E1 component 2142010 12845665 Q7A_2085 Methylophaga nitratireducenticrescens pyruvate dehydrogenase E1 component YP_006296544.1 2139356 R 754476 CDS YP_006296545.1 387127940 12845666 complement(2142190..2142792) 1 NC_017857.1 PFAM: Ferric reductase like transmembrane component; hypothetical protein 2142792 12845666 Q7A_2086 Methylophaga nitratireducenticrescens hypothetical protein YP_006296545.1 2142190 R 754476 CDS YP_006296546.1 387127941 12845667 complement(2142792..2143748) 1 NC_017857.1 PFAM: Oxidoreductase molybdopterin binding domain; sulfite oxidase subunit YedY 2143748 12845667 Q7A_2087 Methylophaga nitratireducenticrescens sulfite oxidase subunit YedY YP_006296546.1 2142792 R 754476 CDS YP_006296547.1 387127942 12845668 complement(2143735..2144370) 1 NC_017857.1 PFAM: DoxX; hypothetical protein 2144370 12845668 Q7A_2088 Methylophaga nitratireducenticrescens hypothetical protein YP_006296547.1 2143735 R 754476 CDS YP_006296548.1 387127943 12845669 complement(2144436..2144729) 1 NC_017857.1 hypothetical protein 2144729 12845669 Q7A_2089 Methylophaga nitratireducenticrescens hypothetical protein YP_006296548.1 2144436 R 754476 CDS YP_006296549.1 387127944 12845670 2144924..2145544 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE 2145544 12845670 Q7A_2090 Methylophaga nitratireducenticrescens RNA polymerase sigma factor RpoE YP_006296549.1 2144924 D 754476 CDS YP_006296550.1 387127945 12845671 2145546..2145785 1 NC_017857.1 hypothetical protein 2145785 12845671 Q7A_2091 Methylophaga nitratireducenticrescens hypothetical protein YP_006296550.1 2145546 D 754476 CDS YP_006296551.1 387127946 12845672 complement(2145818..2146063) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1244); hypothetical protein 2146063 12845672 Q7A_2092 Methylophaga nitratireducenticrescens hypothetical protein YP_006296551.1 2145818 R 754476 CDS YP_006296552.1 387127947 12845673 complement(2146041..2148074) 1 NC_017857.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; dipeptide transport ATP-binding protein DppF 2148074 12845673 Q7A_2093 Methylophaga nitratireducenticrescens dipeptide transport ATP-binding protein DppF YP_006296552.1 2146041 R 754476 CDS YP_006296553.1 387127948 12845674 complement(2148071..2149480) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease protein 2149480 12845674 Q7A_2094 Methylophaga nitratireducenticrescens oligopeptide transport system permease protein YP_006296553.1 2148071 R 754476 CDS YP_006296554.1 387127949 12845675 complement(2149489..2150451) 1 NC_017857.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2150451 12845675 Q7A_2095 Methylophaga nitratireducenticrescens 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_006296554.1 2149489 R 754476 CDS YP_006296555.1 387127950 12845676 complement(2150452..2151540) 1 NC_017857.1 PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; chorismate mutase I / Prephenate dehydratase 2151540 12845676 Q7A_2096 Methylophaga nitratireducenticrescens chorismate mutase I / Prephenate dehydratase YP_006296555.1 2150452 R 754476 CDS YP_006296556.1 387127951 12845677 complement(2151543..2152622) 1 NC_017857.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 2152622 12845677 Q7A_2097 Methylophaga nitratireducenticrescens phosphoserine aminotransferase YP_006296556.1 2151543 R 754476 CDS YP_006296557.1 387127952 12845678 complement(2152628..2155207) 1 NC_017857.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A 2155207 12845678 Q7A_2098 Methylophaga nitratireducenticrescens DNA gyrase subunit A YP_006296557.1 2152628 R 754476 CDS YP_006296558.1 387127953 12845679 complement(2155358..2155999) 1 NC_017857.1 PFAM: Protein of unknown function (DUF330); ABC transporter auxiliary protein 2155999 12845679 Q7A_2099 Methylophaga nitratireducenticrescens ABC transporter auxiliary protein YP_006296558.1 2155358 R 754476 CDS YP_006296559.1 387127954 12845680 2156109..2156624 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 2156624 12845680 Q7A_2100 Methylophaga nitratireducenticrescens adenine phosphoribosyltransferase YP_006296559.1 2156109 D 754476 CDS YP_006296560.1 387127955 12845681 2156624..2157466 1 NC_017857.1 PFAM: OmpA family; thrombospondin type 3 repeat:OmpA/MotB 2157466 12845681 Q7A_2101 Methylophaga nitratireducenticrescens thrombospondin type 3 repeat:OmpA/MotB YP_006296560.1 2156624 D 754476 CDS YP_006296561.1 387127956 12845682 complement(2157455..2158924) 1 NC_017857.1 PFAM: Phosphomethylpyrimidine kinase; Thiamine monophosphate synthase/TENI; TIGRFAM: phosphomethylpyrimidine kinase; thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase / Thiamin-phosphate pyrophosphorylase 2158924 12845682 Q7A_2102 Methylophaga nitratireducenticrescens phosphomethylpyrimidine kinase / Thiamin-phosphate pyrophosphorylase YP_006296561.1 2157455 R 754476 CDS YP_006296562.1 387127957 12845766 complement(2158917..2159714) 1 NC_017857.1 PFAM: Thiazole biosynthesis protein ThiG; thiazole biosynthesis protein ThiG 2159714 12845766 Q7A_2103 Methylophaga nitratireducenticrescens thiazole biosynthesis protein ThiG YP_006296562.1 2158917 R 754476 CDS YP_006296563.1 387127958 12845767 complement(2159716..2159931) 1 NC_017857.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2159931 12845767 Q7A_2104 Methylophaga nitratireducenticrescens thiamine biosynthesis protein ThiS YP_006296563.1 2159716 R 754476 CDS YP_006296564.1 387127959 12845768 complement(2159921..2161000) 1 NC_017857.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; glycine oxidase 2161000 12845768 Q7A_2105 Methylophaga nitratireducenticrescens glycine oxidase YP_006296564.1 2159921 R 754476 CDS YP_006296565.1 387127960 12845769 complement(2161013..2162824) 1 NC_017857.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; thiamin biosynthesis protein ThiC 2162824 12845769 Q7A_2106 Methylophaga nitratireducenticrescens thiamin biosynthesis protein ThiC YP_006296565.1 2161013 R 754476 CDS YP_006296566.1 387127961 12845770 2163423..2163971 1 NC_017857.1 PFAM: Smr domain; hypothetical protein 2163971 12845770 Q7A_2107 Methylophaga nitratireducenticrescens hypothetical protein YP_006296566.1 2163423 D 754476 CDS YP_006296567.1 387127962 12845771 2164174..2164950 1 NC_017857.1 PFAM: Predicted nucleotidyltransferase; nucleotidyltransferase 2164950 12845771 Q7A_2108 Methylophaga nitratireducenticrescens nucleotidyltransferase YP_006296567.1 2164174 D 754476 CDS YP_006296568.1 387127963 12845772 2166198..2169131 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2169131 12845772 Q7A_2109 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296568.1 2166198 D 754476 CDS YP_006296569.1 387127964 12845773 complement(2169137..2170420) 1 NC_017857.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2170420 12845773 Q7A_2110 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296569.1 2169137 R 754476 CDS YP_006296570.1 387127965 12845774 2170450..2170569 1 NC_017857.1 hypothetical protein 2170569 12845774 Q7A_2111 Methylophaga nitratireducenticrescens hypothetical protein YP_006296570.1 2170450 D 754476 CDS YP_006296571.1 387127966 12845775 complement(2170551..2170697) 1 NC_017857.1 hypothetical protein 2170697 12845775 Q7A_2112 Methylophaga nitratireducenticrescens hypothetical protein YP_006296571.1 2170551 R 754476 CDS YP_006296572.1 387127967 12845776 complement(2170873..2174199) 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2174199 12845776 Q7A_2113 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006296572.1 2170873 R 754476 CDS YP_006296573.1 387127968 12845777 complement(2174827..2175309) 1 NC_017857.1 hypothetical protein 2175309 12845777 Q7A_2114 Methylophaga nitratireducenticrescens hypothetical protein YP_006296573.1 2174827 R 754476 CDS YP_006296574.1 387127969 12845778 complement(2175364..2176737) 1 NC_017857.1 PFAM: Uncharacterized ACR (DUF711); hypothetical protein 2176737 12845778 Q7A_2115 Methylophaga nitratireducenticrescens hypothetical protein YP_006296574.1 2175364 R 754476 CDS YP_006296575.1 387127970 12845779 complement(2176748..2177314) 1 NC_017857.1 PFAM: ACT domain; amino acid-binding ACT protein 2177314 12845779 Q7A_2116 Methylophaga nitratireducenticrescens amino acid-binding ACT protein YP_006296575.1 2176748 R 754476 CDS YP_006296576.1 387127971 12845780 complement(2177546..2177908) 1 NC_017857.1 hypothetical protein 2177908 12845780 Q7A_2117 Methylophaga nitratireducenticrescens hypothetical protein YP_006296576.1 2177546 R 754476 CDS YP_006296577.1 387127972 12845781 2178031..2178363 1 NC_017857.1 hypothetical protein 2178363 12845781 Q7A_2118 Methylophaga nitratireducenticrescens hypothetical protein YP_006296577.1 2178031 D 754476 CDS YP_006296578.1 387127973 12845782 complement(2179001..2179153) 1 NC_017857.1 ISSod6 transposase, IS1301 2179153 12845782 Q7A_2119 Methylophaga nitratireducenticrescens ISSod6 transposase, IS1301 YP_006296578.1 2179001 R 754476 CDS YP_006296579.1 387127974 12845783 complement(2179218..2179745) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2380); hypothetical protein 2179745 12845783 Q7A_2120 Methylophaga nitratireducenticrescens hypothetical protein YP_006296579.1 2179218 R 754476 CDS YP_006296580.1 387127975 12845784 complement(2179848..2180528) 1 NC_017857.1 lipase 2180528 12845784 Q7A_2121 Methylophaga nitratireducenticrescens lipase YP_006296580.1 2179848 R 754476 CDS YP_006296581.1 387127976 12845785 complement(2180674..2181210) 1 NC_017857.1 PFAM: Glutathione peroxidase; glutathione peroxidase 2181210 12845785 Q7A_2122 Methylophaga nitratireducenticrescens glutathione peroxidase YP_006296581.1 2180674 R 754476 CDS YP_006296582.1 387127977 12845786 complement(2181311..2182963) 1 NC_017857.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter ATPase 2182963 12845786 Q7A_2123 Methylophaga nitratireducenticrescens ABC transporter ATPase YP_006296582.1 2181311 R 754476 CDS YP_006296583.1 387127978 12845787 complement(2182960..2184156) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide transport system permease DppC 2184156 12845787 Q7A_2124 Methylophaga nitratireducenticrescens dipeptide transport system permease DppC YP_006296583.1 2182960 R 754476 CDS YP_006296584.1 387127979 12845788 complement(2184149..2185531) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease OppB 2185531 12845788 Q7A_2125 Methylophaga nitratireducenticrescens oligopeptide transport system permease OppB YP_006296584.1 2184149 R 754476 CDS YP_006296585.1 387127980 12845789 complement(2185811..2187691) 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter substrate-binding protein OppA 2187691 12845789 Q7A_2126 Methylophaga nitratireducenticrescens oligopeptide ABC transporter substrate-binding protein OppA YP_006296585.1 2185811 R 754476 CDS YP_006296586.1 387127981 12845790 complement(2187865..2188788) 1 NC_017857.1 PFAM: Patatin-like phospholipase; Patatin-like phospholipase 2188788 12845790 Q7A_2127 Methylophaga nitratireducenticrescens Patatin-like phospholipase YP_006296586.1 2187865 R 754476 CDS YP_006296587.1 387127982 12845791 2188902..2189114 1 NC_017857.1 hypothetical protein 2189114 12845791 Q7A_2128 Methylophaga nitratireducenticrescens hypothetical protein YP_006296587.1 2188902 D 754476 CDS YP_006296588.1 387127983 12845792 complement(2189129..2190505) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; metallo-beta-lactamase-like protein 2190505 12845792 Q7A_2129 Methylophaga nitratireducenticrescens metallo-beta-lactamase-like protein YP_006296588.1 2189129 R 754476 CDS YP_006296589.1 387127984 12845793 2191487..2191777 1 NC_017857.1 PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; oxaloacetate decarboxylase subunit gamma 2191777 12845793 Q7A_2130 Methylophaga nitratireducenticrescens oxaloacetate decarboxylase subunit gamma YP_006296589.1 2191487 D 754476 CDS YP_006296590.1 387127985 12845794 2191823..2193607 1 NC_017857.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; oxaloacetate decarboxylase subunit alpha 2193607 12845794 Q7A_2131 Methylophaga nitratireducenticrescens oxaloacetate decarboxylase subunit alpha YP_006296590.1 2191823 D 754476 CDS YP_006296591.1 387127986 12845795 2193619..2194752 1 NC_017857.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; oxaloacetate decarboxylase subunit beta 2194752 12845795 Q7A_2132 Methylophaga nitratireducenticrescens oxaloacetate decarboxylase subunit beta YP_006296591.1 2193619 D 754476 CDS YP_006296592.1 387127987 12845796 complement(2194780..2195178) 1 NC_017857.1 hypothetical protein 2195178 12845796 Q7A_2133 Methylophaga nitratireducenticrescens hypothetical protein YP_006296592.1 2194780 R 754476 CDS YP_006296593.1 387127988 12845797 2195367..2195486 1 NC_017857.1 hypothetical protein 2195486 12845797 Q7A_2134 Methylophaga nitratireducenticrescens hypothetical protein YP_006296593.1 2195367 D 754476 CDS YP_006296594.1 387127989 12845798 2195545..2195766 1 NC_017857.1 PFAM: S4 domain; hypothetical protein 2195766 12845798 Q7A_2135 Methylophaga nitratireducenticrescens hypothetical protein YP_006296594.1 2195545 D 754476 CDS YP_006296595.1 387127990 12845799 2195878..2196150 1 NC_017857.1 PFAM: Bacterial regulatory protein, arsR family; Arsenical resistance operon repressor 2196150 12845799 Q7A_2136 Methylophaga nitratireducenticrescens Arsenical resistance operon repressor YP_006296595.1 2195878 D 754476 CDS YP_006296596.1 387127991 12845800 2196187..2196672 1 NC_017857.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; Arsenate reductase 2196672 12845800 Q7A_2137 Methylophaga nitratireducenticrescens Arsenate reductase YP_006296596.1 2196187 D 754476 CDS YP_006296597.1 387127992 12845801 2196672..2197706 1 NC_017857.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein ACR3 2197706 12845801 Q7A_2138 Methylophaga nitratireducenticrescens arsenical-resistance protein ACR3 YP_006296597.1 2196672 D 754476 CDS YP_006296598.1 387127993 12845802 2197703..2198704 1 NC_017857.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 2198704 12845802 Q7A_2139 Methylophaga nitratireducenticrescens NAD-dependent glyceraldehyde-3-phosphate dehydrogenase YP_006296598.1 2197703 D 754476 CDS YP_006296599.1 387127994 12845803 complement(2198706..2199377) 1 NC_017857.1 TIGRFAM: DNA alkylation damage repair protein AlkB; alkylated DNA repair protein AlkB 2199377 12845803 Q7A_2140 Methylophaga nitratireducenticrescens alkylated DNA repair protein AlkB YP_006296599.1 2198706 R 754476 CDS YP_006296600.1 387127995 12845804 2199603..2199770 1 NC_017857.1 hypothetical protein 2199770 12845804 Q7A_2141 Methylophaga nitratireducenticrescens hypothetical protein YP_006296600.1 2199603 D 754476 CDS YP_006296601.1 387127996 12845805 complement(2199741..2200280) 1 NC_017857.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase 2200280 12845805 Q7A_2142 Methylophaga nitratireducenticrescens ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase YP_006296601.1 2199741 R 754476 CDS YP_006296602.1 387127997 12845806 2200446..2200853 1 NC_017857.1 hypothetical protein 2200853 12845806 Q7A_2143 Methylophaga nitratireducenticrescens hypothetical protein YP_006296602.1 2200446 D 754476 CDS YP_006296603.1 387127998 12845807 2201140..2202168 1 NC_017857.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family; flavin oxidoreductase/NADH oxidase 2202168 12845807 Q7A_2144 Methylophaga nitratireducenticrescens flavin oxidoreductase/NADH oxidase YP_006296603.1 2201140 D 754476 CDS YP_006296604.1 387127999 12845808 2202550..2204256 1 NC_017857.1 PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; Transporter associated domain; sodium/hydrogen exchanger 2204256 12845808 Q7A_2145 Methylophaga nitratireducenticrescens sodium/hydrogen exchanger YP_006296604.1 2202550 D 754476 CDS YP_006296605.1 387128000 12845809 complement(2204257..2204901) 1 NC_017857.1 PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; multiple antibiotic resistance (MarC)-like protein 2204901 12845809 Q7A_2146 Methylophaga nitratireducenticrescens multiple antibiotic resistance (MarC)-like protein YP_006296605.1 2204257 R 754476 CDS YP_006296606.1 387128001 12845810 complement(2204999..2205448) 1 NC_017857.1 PFAM: Domain of unknown function (DUF305); hypothetical protein 2205448 12845810 Q7A_2147 Methylophaga nitratireducenticrescens hypothetical protein YP_006296606.1 2204999 R 754476 CDS YP_006296607.1 387128002 12845811 complement(2206130..2207401) 1 NC_017857.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; Error-prone, lesion bypass DNA polymerase V (UmuC) 2207401 12845811 Q7A_2148 Methylophaga nitratireducenticrescens Error-prone, lesion bypass DNA polymerase V (UmuC) YP_006296607.1 2206130 R 754476 CDS YP_006296608.1 387128003 12845812 complement(2207403..2207834) 1 NC_017857.1 PFAM: Peptidase S24-like; Error-prone repair protein UmuD 2207834 12845812 Q7A_2149 Methylophaga nitratireducenticrescens Error-prone repair protein UmuD YP_006296608.1 2207403 R 754476 CDS YP_006296609.1 387128004 12845813 complement(2208084..2208659) 1 NC_017857.1 PFAM: SNARE associated Golgi protein; hypothetical protein 2208659 12845813 Q7A_2150 Methylophaga nitratireducenticrescens hypothetical protein YP_006296609.1 2208084 R 754476 CDS YP_006296610.1 387128005 12845814 complement(2209051..2209578) 1 NC_017857.1 hypothetical protein 2209578 12845814 Q7A_2151 Methylophaga nitratireducenticrescens hypothetical protein YP_006296610.1 2209051 R 754476 CDS YP_006296611.1 387128006 12845815 2209778..2210095 1 NC_017857.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; ribosomal subunit interface protein 2210095 12845815 Q7A_2152 Methylophaga nitratireducenticrescens ribosomal subunit interface protein YP_006296611.1 2209778 D 754476 CDS YP_006296612.1 387128007 12845816 complement(2210216..2214079) 1 NC_017857.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; Nucleotidyltransferase domain; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; type I restriction-modification system, restriction subunit R 2214079 12845816 Q7A_2153 Methylophaga nitratireducenticrescens type I restriction-modification system, restriction subunit R YP_006296612.1 2210216 R 754476 CDS YP_006296613.1 387128008 12845817 complement(2214076..2214486) 1 NC_017857.1 PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein 2214486 12845817 Q7A_2154 Methylophaga nitratireducenticrescens nucleotidyltransferase substrate-binding protein YP_006296613.1 2214076 R 754476 CDS YP_006296614.1 387128009 12845818 complement(2214499..2215737) 1 NC_017857.1 PFAM: Type I restriction modification DNA specificity domain; type I restriction-modification system, specificity subunit S 2215737 12845818 Q7A_2155 Methylophaga nitratireducenticrescens type I restriction-modification system, specificity subunit S YP_006296614.1 2214499 R 754476 CDS YP_006296615.1 387128010 12845819 complement(2215737..2217332) 1 NC_017857.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system, DNA-methyltransferase subunit M 2217332 12845819 Q7A_2156 Methylophaga nitratireducenticrescens type I restriction-modification system, DNA-methyltransferase subunit M YP_006296615.1 2215737 R 754476 CDS YP_006296616.1 387128011 12845820 complement(2217343..2218347) 1 NC_017857.1 PFAM: Fic/DOC family; DNA-binding protein in cluster with Type I restriction-modification system 2218347 12845820 Q7A_2157 Methylophaga nitratireducenticrescens DNA-binding protein in cluster with Type I restriction-modification system YP_006296616.1 2217343 R 754476 CDS YP_006296617.1 387128012 12845821 complement(2218406..2219320) 1 NC_017857.1 PFAM: Restriction endonuclease; mrr restriction system protein 2219320 12845821 Q7A_2158 Methylophaga nitratireducenticrescens mrr restriction system protein YP_006296617.1 2218406 R 754476 CDS YP_006296618.1 387128013 12845822 complement(2219443..2220468) 1 NC_017857.1 AraC family transcriptional regulator 2220468 12845822 Q7A_2159 Methylophaga nitratireducenticrescens AraC family transcriptional regulator YP_006296618.1 2219443 R 754476 CDS YP_006296619.1 387128014 12845823 complement(2220473..2221387) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2221387 12845823 Q7A_2160 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296619.1 2220473 R 754476 CDS YP_006296620.1 387128015 12845824 2221759..2224263 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor; TonB-dependent receptor 2224263 12845824 Q7A_2161 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006296620.1 2221759 D 754476 CDS YP_006296621.1 387128016 12845825 2224349..2226229 1 NC_017857.1 PFAM: Phytase; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) 2226229 12845825 Q7A_2162 Methylophaga nitratireducenticrescens 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_006296621.1 2224349 D 754476 CDS YP_006296622.1 387128017 12845826 2226240..2226941 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; motA/TolQ/ExbB proton channel family protein 2226941 12845826 Q7A_2163 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006296622.1 2226240 D 754476 CDS YP_006296623.1 387128018 12845827 2226949..2227398 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; biopolymer transport protein ExbD/TolR 2227398 12845827 Q7A_2164 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006296623.1 2226949 D 754476 CDS YP_006296624.1 387128019 12845828 2227391..2228230 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; Ferric siderophore transport system, periplasmic binding protein TonB 2228230 12845828 Q7A_2165 Methylophaga nitratireducenticrescens Ferric siderophore transport system, periplasmic binding protein TonB YP_006296624.1 2227391 D 754476 CDS YP_006296625.1 387128020 12845829 2228248..2230221 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF839); phosphatase 2230221 12845829 Q7A_2166 Methylophaga nitratireducenticrescens phosphatase YP_006296625.1 2228248 D 754476 CDS YP_006296626.1 387128021 12845830 2230478..2230783 1 NC_017857.1 hypothetical protein 2230783 12845830 Q7A_2167 Methylophaga nitratireducenticrescens hypothetical protein YP_006296626.1 2230478 D 754476 CDS YP_006296627.1 387128022 12845831 complement(2230796..2231287) 1 NC_017857.1 PFAM: AraC-type transcriptional regulator N-terminus; AraC family transcriptional regulator 2231287 12845831 Q7A_2168 Methylophaga nitratireducenticrescens AraC family transcriptional regulator YP_006296627.1 2230796 R 754476 CDS YP_006296628.1 387128023 12845832 2231412..2231873 1 NC_017857.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase MsrB 2231873 12845832 Q7A_2169 Methylophaga nitratireducenticrescens peptide methionine sulfoxide reductase MsrB YP_006296628.1 2231412 D 754476 CDS YP_006296629.1 387128024 12845833 2231870..2232370 1 NC_017857.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; peptide methionine sulfoxide reductase MsrA 2232370 12845833 Q7A_2170 Methylophaga nitratireducenticrescens peptide methionine sulfoxide reductase MsrA YP_006296629.1 2231870 D 754476 CDS YP_006296630.1 387128025 12845834 complement(2232456..2232881) 1 NC_017857.1 hypothetical protein 2232881 12845834 Q7A_2171 Methylophaga nitratireducenticrescens hypothetical protein YP_006296630.1 2232456 R 754476 CDS YP_006296631.1 387128026 12845835 complement(2232859..2233458) 1 NC_017857.1 PFAM: Nucleotidyltransferase domain; nucleotidyltransferase 2233458 12845835 Q7A_2172 Methylophaga nitratireducenticrescens nucleotidyltransferase YP_006296631.1 2232859 R 754476 CDS YP_006296632.1 387128027 12845836 complement(2233927..2234046) 1 NC_017857.1 hypothetical protein 2234046 12845836 Q7A_2173 Methylophaga nitratireducenticrescens hypothetical protein YP_006296632.1 2233927 R 754476 CDS YP_006296633.1 387128028 12845837 complement(2234474..2235388) 1 NC_017857.1 hypothetical protein 2235388 12845837 Q7A_2174 Methylophaga nitratireducenticrescens hypothetical protein YP_006296633.1 2234474 R 754476 CDS YP_006296634.1 387128029 12845838 complement(2235787..2237652) 1 NC_017857.1 PFAM: Nuclease-related domain; UvrD/REP helicase; nuclease-like protein 2237652 12845838 Q7A_2175 Methylophaga nitratireducenticrescens nuclease-like protein YP_006296634.1 2235787 R 754476 CDS YP_006296635.1 387128030 12845839 complement(2238463..2238954) 1 NC_017857.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; tmRNA-binding protein SmpB 2238954 12845839 Q7A_2176 Methylophaga nitratireducenticrescens tmRNA-binding protein SmpB YP_006296635.1 2238463 R 754476 CDS YP_006296636.1 387128031 12845840 2239032..2240420 1 NC_017857.1 PFAM: Sodium:neurotransmitter symporter family; Sodium-dependent transporter family protein 2240420 12845840 Q7A_2177 Methylophaga nitratireducenticrescens Sodium-dependent transporter family protein YP_006296636.1 2239032 D 754476 CDS YP_006296637.1 387128032 12845841 2240440..2240880 1 NC_017857.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; oligoketide cyclase/lipid transport protein 2240880 12845841 Q7A_2178 Methylophaga nitratireducenticrescens oligoketide cyclase/lipid transport protein YP_006296637.1 2240440 D 754476 CDS YP_006296638.1 387128033 12845842 2240867..2241193 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0125); hypothetical protein 2241193 12845842 Q7A_2179 Methylophaga nitratireducenticrescens hypothetical protein YP_006296638.1 2240867 D 754476 CDS YP_006296639.1 387128034 12845843 complement(2241183..2241989) 1 NC_017857.1 PFAM: Protein of unknown function (DUF455); hypothetical protein 2241989 12845843 Q7A_2180 Methylophaga nitratireducenticrescens hypothetical protein YP_006296639.1 2241183 R 754476 CDS YP_006296640.1 387128035 12845844 complement(2241982..2242962) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; oligopeptide transport system permease OppB 2242962 12845844 Q7A_2181 Methylophaga nitratireducenticrescens oligopeptide transport system permease OppB YP_006296640.1 2241982 R 754476 CDS YP_006296641.1 387128036 12845845 2243167..2243526 1 NC_017857.1 PFAM: Rhodanese-like domain; hypothetical protein 2243526 12845845 Q7A_2182 Methylophaga nitratireducenticrescens hypothetical protein YP_006296641.1 2243167 D 754476 CDS YP_006296642.1 387128037 12845846 2243591..2244307 1 NC_017857.1 hypothetical protein 2244307 12845846 Q7A_2183 Methylophaga nitratireducenticrescens hypothetical protein YP_006296642.1 2243591 D 754476 CDS YP_006296643.1 387128038 12845847 2244388..2245236 1 NC_017857.1 PFAM: Protein of unknown function (DUF692); hypothetical protein 2245236 12845847 Q7A_2184 Methylophaga nitratireducenticrescens hypothetical protein YP_006296643.1 2244388 D 754476 CDS YP_006296644.1 387128039 12845931 2245220..2245963 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063); hypothetical protein 2245963 12845931 Q7A_2185 Methylophaga nitratireducenticrescens hypothetical protein YP_006296644.1 2245220 D 754476 CDS YP_006296645.1 387128040 12845932 complement(2246026..2246658) 1 NC_017857.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 4-hydroxy-2-ketovalerate aldolase 2246658 12845932 Q7A_2186 Methylophaga nitratireducenticrescens 4-hydroxy-2-ketovalerate aldolase YP_006296645.1 2246026 R 754476 CDS YP_006296646.1 387128041 12845933 complement(2246690..2248513) 1 NC_017857.1 PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase; phosphogluconate dehydratase 2248513 12845933 Q7A_2187 Methylophaga nitratireducenticrescens phosphogluconate dehydratase YP_006296646.1 2246690 R 754476 CDS YP_006296647.1 387128042 12845934 2248939..2249625 1 NC_017857.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine46-N7-)-methyltransferase 2249625 12845934 Q7A_2188 Methylophaga nitratireducenticrescens tRNA (guanine46-N7-)-methyltransferase YP_006296647.1 2248939 D 754476 CDS YP_006296648.1 387128043 12845935 2249705..2251006 1 NC_017857.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); long-chain fatty acid transport protein 2251006 12845935 Q7A_2189 Methylophaga nitratireducenticrescens long-chain fatty acid transport protein YP_006296648.1 2249705 D 754476 CDS YP_006296649.1 387128044 12845936 2251009..2252823 1 NC_017857.1 PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 2252823 12845936 Q7A_2190 Methylophaga nitratireducenticrescens long-chain-fatty-acid--CoA ligase YP_006296649.1 2251009 D 754476 CDS YP_006296650.1 387128045 12845937 complement(2252815..2254119) 1 NC_017857.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; dihydrofolate synthase / Folylpolyglutamate synthase 2254119 12845937 Q7A_2191 Methylophaga nitratireducenticrescens dihydrofolate synthase / Folylpolyglutamate synthase YP_006296650.1 2252815 R 754476 CDS YP_006296651.1 387128046 12845938 complement(2254130..2254987) 1 NC_017857.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxyl transferase subunit beta 2254987 12845938 Q7A_2192 Methylophaga nitratireducenticrescens acetyl-coenzyme A carboxyl transferase subunit beta YP_006296651.1 2254130 R 754476 CDS YP_006296652.1 387128047 12845939 complement(2255007..2255834) 1 NC_017857.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 2255834 12845939 Q7A_2193 Methylophaga nitratireducenticrescens tryptophan synthase subunit alpha YP_006296652.1 2255007 R 754476 CDS YP_006296653.1 387128048 12845940 complement(2255845..2257065) 1 NC_017857.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 2257065 12845940 Q7A_2194 Methylophaga nitratireducenticrescens tryptophan synthase subunit beta YP_006296653.1 2255845 R 754476 CDS YP_006296654.1 387128049 12845941 complement(2257058..2257240) 1 NC_017857.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 2257240 12845941 Q7A_2195 Methylophaga nitratireducenticrescens phosphoribosylanthranilate isomerase YP_006296654.1 2257058 R 754476 CDS YP_006296655.1 387128050 12845942 complement(2257237..2257671) 1 NC_017857.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 2257671 12845942 Q7A_2196 Methylophaga nitratireducenticrescens phosphoribosylanthranilate isomerase YP_006296655.1 2257237 R 754476 CDS YP_006296656.1 387128051 12845943 complement(2257709..2258488) 1 NC_017857.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A 2258488 12845943 Q7A_2197 Methylophaga nitratireducenticrescens tRNA pseudouridine synthase A YP_006296656.1 2257709 R 754476 CDS YP_006296657.1 387128052 12845944 complement(2258500..2261439) 1 NC_017857.1 PFAM: LysM domain; TIGRFAM: FimV C-terminal domain; FimV N-terminal domain; hypothetical protein 2261439 12845944 Q7A_2198 Methylophaga nitratireducenticrescens hypothetical protein YP_006296657.1 2258500 R 754476 CDS YP_006296658.1 387128053 12845945 complement(2261472..2262512) 1 NC_017857.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Aspartate-semialdehyde dehydrogenase 2262512 12845945 Q7A_2199 Methylophaga nitratireducenticrescens Aspartate-semialdehyde dehydrogenase YP_006296658.1 2261472 R 754476 CDS YP_006296659.1 387128054 12845946 complement(2262516..2263586) 1 NC_017857.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2263586 12845946 Q7A_2200 Methylophaga nitratireducenticrescens 3-isopropylmalate dehydrogenase YP_006296659.1 2262516 R 754476 CDS YP_006296660.1 387128055 12845947 complement(2263617..2264216) 1 NC_017857.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 2264216 12845947 Q7A_2201 Methylophaga nitratireducenticrescens 3-isopropylmalate dehydratase small subunit YP_006296660.1 2263617 R 754476 CDS YP_006296661.1 387128056 12845948 complement(2264461..2265357) 1 NC_017857.1 PFAM: OmpA family; TIGRFAM: type VI secretion system OmpA/MotB family protein; flagellar motor rotation protein MotB 2265357 12845948 Q7A_2202 Methylophaga nitratireducenticrescens flagellar motor rotation protein MotB YP_006296661.1 2264461 R 754476 CDS YP_006296662.1 387128057 12845949 complement(2265381..2266154) 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 2266154 12845949 Q7A_2203 Methylophaga nitratireducenticrescens flagellar motor rotation protein MotA YP_006296662.1 2265381 R 754476 CDS YP_006296663.1 387128058 12845950 complement(2266243..2268405) 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide-binding ABC transporter, periplasmic substrate-binding component 2268405 12845950 Q7A_2204 Methylophaga nitratireducenticrescens dipeptide-binding ABC transporter, periplasmic substrate-binding component YP_006296663.1 2266243 R 754476 CDS YP_006296664.1 387128059 12845951 2268520..2269308 1 NC_017857.1 PFAM: short chain dehydrogenase; enoyl-ACP reductase 2269308 12845951 Q7A_2205 Methylophaga nitratireducenticrescens enoyl-ACP reductase YP_006296664.1 2268520 D 754476 CDS YP_006296665.1 387128060 12845952 2269397..2270614 1 NC_017857.1 PFAM: Sodium:dicarboxylate symporter family; proton/glutamate symport protein @ Sodium/glutamate symport protein 2270614 12845952 Q7A_2206 Methylophaga nitratireducenticrescens proton/glutamate symport protein @ Sodium/glutamate symport protein YP_006296665.1 2269397 D 754476 CDS YP_006296666.1 387128061 12845953 2270868..2271122 1 NC_017857.1 hypothetical protein 2271122 12845953 Q7A_2207 Methylophaga nitratireducenticrescens hypothetical protein YP_006296666.1 2270868 D 754476 CDS YP_006296667.1 387128062 12845954 2271119..2272504 1 NC_017857.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; HipA protein 2272504 12845954 Q7A_2208 Methylophaga nitratireducenticrescens HipA protein YP_006296667.1 2271119 D 754476 CDS YP_006296668.1 387128063 12845955 complement(2272659..2274551) 1 NC_017857.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; peptidyl-prolyl cis-trans isomerase ppiD 2274551 12845955 Q7A_2209 Methylophaga nitratireducenticrescens peptidyl-prolyl cis-trans isomerase ppiD YP_006296668.1 2272659 R 754476 CDS YP_006296669.1 387128064 12845958 complement(2274803..2275075) 1 NC_017857.1 PFAM: Bacterial DNA-binding protein; DNA-binding protein HU-beta 2275075 12845958 Q7A_2212 Methylophaga nitratireducenticrescens DNA-binding protein HU-beta YP_006296669.1 2274803 R 754476 CDS YP_006296670.1 387128065 12845959 complement(2275297..2276091) 1 NC_017857.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase 2276091 12845959 Q7A_2213 Methylophaga nitratireducenticrescens dimethyladenosine transferase YP_006296670.1 2275297 R 754476 CDS YP_006296671.1 387128066 12845960 complement(2276088..2277083) 1 NC_017857.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 2277083 12845960 Q7A_2214 Methylophaga nitratireducenticrescens 4-hydroxythreonine-4-phosphate dehydrogenase YP_006296671.1 2276088 R 754476 CDS YP_006296672.1 387128067 12845961 complement(2277080..2278345) 1 NC_017857.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) 2278345 12845961 Q7A_2215 Methylophaga nitratireducenticrescens survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) YP_006296672.1 2277080 R 754476 CDS YP_006296673.1 387128068 12845962 complement(2278480..2280726) 1 NC_017857.1 PFAM: Organic solvent tolerance protein; OstA-like protein; outer membrane protein Imp 2280726 12845962 Q7A_2216 Methylophaga nitratireducenticrescens outer membrane protein Imp YP_006296673.1 2278480 R 754476 CDS YP_006296674.1 387128069 12845965 2281233..2281919 1 NC_017857.1 hypothetical protein 2281919 12845965 Q7A_2219 Methylophaga nitratireducenticrescens hypothetical protein YP_006296674.1 2281233 D 754476 CDS YP_006296675.1 387128070 12845966 complement(2281916..2282911) 1 NC_017857.1 PFAM: Predicted permease YjgP/YjgQ family; permease 2282911 12845966 Q7A_2220 Methylophaga nitratireducenticrescens permease YP_006296675.1 2281916 R 754476 CDS YP_006296676.1 387128071 12845967 complement(2282974..2284050) 1 NC_017857.1 PFAM: Predicted permease YjgP/YjgQ family; permease 2284050 12845967 Q7A_2221 Methylophaga nitratireducenticrescens permease YP_006296676.1 2282974 R 754476 CDS YP_006296677.1 387128072 12845968 2284191..2285678 1 NC_017857.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; cytosol aminopeptidase 2285678 12845968 Q7A_2222 Methylophaga nitratireducenticrescens cytosol aminopeptidase YP_006296677.1 2284191 D 754476 CDS YP_006296678.1 387128073 12845969 2285689..2286123 1 NC_017857.1 PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi 2286123 12845969 Q7A_2223 Methylophaga nitratireducenticrescens DNA polymerase III subunit chi YP_006296678.1 2285689 D 754476 CDS YP_006296679.1 387128074 12845970 2286211..2288964 1 NC_017857.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2288964 12845970 Q7A_2224 Methylophaga nitratireducenticrescens valyl-tRNA synthetase YP_006296679.1 2286211 D 754476 CDS YP_006296680.1 387128075 12845971 2289067..2290695 1 NC_017857.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 2290695 12845971 Q7A_2225 Methylophaga nitratireducenticrescens hypothetical protein YP_006296680.1 2289067 D 754476 CDS YP_006296681.1 387128076 12845972 2290712..2291818 1 NC_017857.1 PFAM: Glucose / Sorbosone dehydrogenase; PQQ-dependent oxidoreductase, gdhB family 2291818 12845972 Q7A_2226 Methylophaga nitratireducenticrescens PQQ-dependent oxidoreductase, gdhB family YP_006296681.1 2290712 D 754476 CDS YP_006296682.1 387128077 12845973 complement(2291815..2292282) 1 NC_017857.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB; transcription elongation factor GreB 2292282 12845973 Q7A_2227 Methylophaga nitratireducenticrescens transcription elongation factor GreB YP_006296682.1 2291815 R 754476 CDS YP_006296683.1 387128078 12845974 complement(2292282..2293628) 1 NC_017857.1 PFAM: FAD dependent oxidoreductase; malate:quinone oxidoreductase 2293628 12845974 Q7A_2228 Methylophaga nitratireducenticrescens malate:quinone oxidoreductase YP_006296683.1 2292282 R 754476 CDS YP_006296684.1 387128079 12845975 complement(2293733..2298082) 1 NC_017857.1 hypothetical protein 2298082 12845975 Q7A_2229 Methylophaga nitratireducenticrescens hypothetical protein YP_006296684.1 2293733 R 754476 CDS YP_006296685.1 387128080 12845976 complement(2298083..2299918) 1 NC_017857.1 PFAM: von Willebrand factor type A domain; TIGRFAM: TIGR03503 family protein; von Willebrand factor type A-like protein 2299918 12845976 Q7A_2230 Methylophaga nitratireducenticrescens von Willebrand factor type A-like protein YP_006296685.1 2298083 R 754476 CDS YP_006296686.1 387128081 12845977 complement(2300006..2301223) 1 NC_017857.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase 2301223 12845977 Q7A_2231 Methylophaga nitratireducenticrescens O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase YP_006296686.1 2300006 R 754476 CDS YP_006296687.1 387128082 12845978 complement(2301390..2303276) 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; outer membrane vitamin B12 receptor BtuB 2303276 12845978 Q7A_2232 Methylophaga nitratireducenticrescens outer membrane vitamin B12 receptor BtuB YP_006296687.1 2301390 R 754476 CDS YP_006296688.1 387128083 12845979 2303869..2304444 1 NC_017857.1 Optional hypothetical component of the B12 transporter BtuM 2304444 12845979 Q7A_2233 Methylophaga nitratireducenticrescens Optional hypothetical component of the B12 transporter BtuM YP_006296688.1 2303869 D 754476 CDS YP_006296689.1 387128084 12845980 2304444..2305736 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; cobyrinic acid A,C-diamide synthase 2305736 12845980 Q7A_2234 Methylophaga nitratireducenticrescens cobyrinic acid A,C-diamide synthase YP_006296689.1 2304444 D 754476 CDS YP_006296690.1 387128085 12845981 2305733..2306395 1 NC_017857.1 PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family 2306395 12845981 Q7A_2235 Methylophaga nitratireducenticrescens Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family YP_006296690.1 2305733 D 754476 CDS YP_006296691.1 387128086 12845982 2306392..2307300 1 NC_017857.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; adenosylcobinamide-phosphate synthase 2307300 12845982 Q7A_2236 Methylophaga nitratireducenticrescens adenosylcobinamide-phosphate synthase YP_006296691.1 2306392 D 754476 CDS YP_006296692.1 387128087 12845983 2307293..2308282 1 NC_017857.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; L-threonine 3-O-phosphate decarboxylase 2308282 12845983 Q7A_2237 Methylophaga nitratireducenticrescens L-threonine 3-O-phosphate decarboxylase YP_006296692.1 2307293 D 754476 CDS YP_006296693.1 387128088 12845984 2308279..2309745 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; cobyric acid synthase 2309745 12845984 Q7A_2238 Methylophaga nitratireducenticrescens cobyric acid synthase YP_006296693.1 2308279 D 754476 CDS YP_006296694.1 387128089 12845985 2309738..2310256 1 NC_017857.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyltransferase 2310256 12845985 Q7A_2239 Methylophaga nitratireducenticrescens adenosylcobinamide-phosphate guanylyltransferase YP_006296694.1 2309738 D 754476 CDS YP_006296695.1 387128090 12845986 2310257..2311318 1 NC_017857.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2311318 12845986 Q7A_2240 Methylophaga nitratireducenticrescens Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_006296695.1 2310257 D 754476 CDS YP_006296696.1 387128091 12845987 2311315..2312037 1 NC_017857.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin synthase 2312037 12845987 Q7A_2241 Methylophaga nitratireducenticrescens cobalamin synthase YP_006296696.1 2311315 D 754476 CDS YP_006296697.1 387128092 12845988 2312045..2312653 1 NC_017857.1 PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; Cob(I)alamin adenosyltransferase 2312653 12845988 Q7A_2242 Methylophaga nitratireducenticrescens Cob(I)alamin adenosyltransferase YP_006296697.1 2312045 D 754476 CDS YP_006296698.1 387128093 12845989 complement(2313014..2315263) 1 NC_017857.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA 2315263 12845989 Q7A_2243 Methylophaga nitratireducenticrescens ATP-dependent Clp protease ATP-binding subunit ClpA YP_006296698.1 2313014 R 754476 CDS YP_006296699.1 387128094 12845990 complement(2315297..2315635) 1 NC_017857.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2315635 12845990 Q7A_2244 Methylophaga nitratireducenticrescens ATP-dependent Clp protease adaptor protein ClpS YP_006296699.1 2315297 R 754476 CDS YP_006296700.1 387128095 12845991 complement(2315632..2315943) 1 NC_017857.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; glutaredoxin-like protein 2315943 12845991 Q7A_2245 Methylophaga nitratireducenticrescens glutaredoxin-like protein YP_006296700.1 2315632 R 754476 CDS YP_006296701.1 387128096 12845992 complement(2316017..2316847) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB; phosphoserine phosphatase 2316847 12845992 Q7A_2246 Methylophaga nitratireducenticrescens phosphoserine phosphatase YP_006296701.1 2316017 R 754476 CDS YP_006296702.1 387128097 12845993 complement(2316939..2317466) 1 NC_017857.1 PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 2317466 12845993 Q7A_2247 Methylophaga nitratireducenticrescens inorganic pyrophosphatase YP_006296702.1 2316939 R 754476 CDS YP_006296703.1 387128098 12845994 complement(2318175..2318984) 1 NC_017857.1 PFAM: Sulfite exporter TauE/SafE; permease 2318984 12845994 Q7A_2248 Methylophaga nitratireducenticrescens permease YP_006296703.1 2318175 R 754476 CDS YP_006296704.1 387128099 12845995 2319142..2320410 1 NC_017857.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; MATE efflux protein 2320410 12845995 Q7A_2249 Methylophaga nitratireducenticrescens MATE efflux protein YP_006296704.1 2319142 D 754476 CDS YP_006296705.1 387128100 12845996 complement(2320407..2320607) 1 NC_017857.1 hypothetical protein 2320607 12845996 Q7A_2250 Methylophaga nitratireducenticrescens hypothetical protein YP_006296705.1 2320407 R 754476 CDS YP_006296706.1 387128101 12845997 complement(2320698..2321510) 1 NC_017857.1 PFAM: RNA pseudouridylate synthase; ribosomal large subunit pseudouridine synthase D 2321510 12845997 Q7A_2251 Methylophaga nitratireducenticrescens ribosomal large subunit pseudouridine synthase D YP_006296706.1 2320698 R 754476 CDS YP_006296707.1 387128102 12845998 2321566..2322024 1 NC_017857.1 hypothetical protein 2322024 12845998 Q7A_2252 Methylophaga nitratireducenticrescens hypothetical protein YP_006296707.1 2321566 D 754476 CDS YP_006296708.1 387128103 12845999 2322027..2322362 1 NC_017857.1 PFAM: Macrophage migration inhibitory factor (MIF); phenylpyruvate tautomerase, putative 2322362 12845999 Q7A_2253 Methylophaga nitratireducenticrescens phenylpyruvate tautomerase, putative YP_006296708.1 2322027 D 754476 CDS YP_006296709.1 387128104 12846000 2322434..2324149 1 NC_017857.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase , bacterial type 2324149 12846000 Q7A_2254 Methylophaga nitratireducenticrescens prolyl-tRNA synthetase , bacterial type YP_006296709.1 2322434 D 754476 CDS YP_006296710.1 387128105 12846001 2324152..2325681 1 NC_017857.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fumarate hydratase class I, aerobic 2325681 12846001 Q7A_2255 Methylophaga nitratireducenticrescens Fumarate hydratase class I, aerobic YP_006296710.1 2324152 D 754476 CDS YP_006296711.1 387128106 12846002 2325692..2326144 1 NC_017857.1 PFAM: Copper resistance protein D; hypothetical protein 2326144 12846002 Q7A_2256 Methylophaga nitratireducenticrescens hypothetical protein YP_006296711.1 2325692 D 754476 CDS YP_006296712.1 387128107 12846003 2326206..2326850 1 NC_017857.1 PFAM: Transglycosylase SLT domain; Lytic transglycosylase 2326850 12846003 Q7A_2257 Methylophaga nitratireducenticrescens Lytic transglycosylase YP_006296712.1 2326206 D 754476 CDS YP_006296713.1 387128108 12846004 2327011..2327625 1 NC_017857.1 PFAM: DUF218 domain; hypothetical protein 2327625 12846004 Q7A_2258 Methylophaga nitratireducenticrescens hypothetical protein YP_006296713.1 2327011 D 754476 CDS YP_006296714.1 387128109 12846005 complement(2327611..2328132) 1 NC_017857.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family; clan AA aspartic protease 2328132 12846005 Q7A_2259 Methylophaga nitratireducenticrescens clan AA aspartic protease YP_006296714.1 2327611 R 754476 CDS YP_006296715.1 387128110 12846006 2328241..2328921 1 NC_017857.1 PFAM: Protein of unknown function (DUF533); hypothetical protein 2328921 12846006 Q7A_2260 Methylophaga nitratireducenticrescens hypothetical protein YP_006296715.1 2328241 D 754476 CDS YP_006296716.1 387128111 12846007 2328934..2330502 1 NC_017857.1 hypothetical protein 2330502 12846007 Q7A_2261 Methylophaga nitratireducenticrescens hypothetical protein YP_006296716.1 2328934 D 754476 CDS YP_006296717.1 387128112 12846008 complement(2330539..2333271) 1 NC_017857.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; Cation transporting ATPase, Haloacid dehalogenase-like hydrolase 2333271 12846008 Q7A_2262 Methylophaga nitratireducenticrescens Cation transporting ATPase, Haloacid dehalogenase-like hydrolase YP_006296717.1 2330539 R 754476 CDS YP_006296718.1 387128113 12846009 2333440..2334180 1 NC_017857.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; Nucleoside-diphosphate-sugar epimerase 2334180 12846009 Q7A_2263 Methylophaga nitratireducenticrescens Nucleoside-diphosphate-sugar epimerase YP_006296718.1 2333440 D 754476 CDS YP_006296719.1 387128114 12846010 2334180..2334638 1 NC_017857.1 PFAM: SEC-C motif; hypothetical protein 2334638 12846010 Q7A_2264 Methylophaga nitratireducenticrescens hypothetical protein YP_006296719.1 2334180 D 754476 CDS YP_006296720.1 387128115 12846011 complement(2334643..2336358) 1 NC_017857.1 PFAM: Acyltransferase; hemolysin 2336358 12846011 Q7A_2265 Methylophaga nitratireducenticrescens hemolysin YP_006296720.1 2334643 R 754476 CDS YP_006296721.1 387128116 12846012 complement(2336476..2336856) 1 NC_017857.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase 2336856 12846012 Q7A_2266 Methylophaga nitratireducenticrescens aspartate 1-decarboxylase YP_006296721.1 2336476 R 754476 CDS YP_006296722.1 387128117 12846076 complement(2336908..2337762) 1 NC_017857.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; Pantoate--beta-alanine ligase 2337762 12846076 Q7A_2267 Methylophaga nitratireducenticrescens Pantoate--beta-alanine ligase YP_006296722.1 2336908 R 754476 CDS YP_006296723.1 387128118 12846077 complement(2337762..2338556) 1 NC_017857.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2338556 12846077 Q7A_2268 Methylophaga nitratireducenticrescens 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006296723.1 2337762 R 754476 CDS YP_006296724.1 387128119 12846078 complement(2338553..2339212) 1 NC_017857.1 PFAM: Deoxynucleoside kinase; deoxyadenosine kinase / Deoxyguanosine kinase 2339212 12846078 Q7A_2269 Methylophaga nitratireducenticrescens deoxyadenosine kinase / Deoxyguanosine kinase YP_006296724.1 2338553 R 754476 CDS YP_006296725.1 387128120 12846079 complement(2339209..2339697) 1 NC_017857.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2339697 12846079 Q7A_2270 Methylophaga nitratireducenticrescens 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_006296725.1 2339209 R 754476 CDS YP_006296726.1 387128121 12846080 complement(2339697..2341070) 1 NC_017857.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; Poly(A) polymerase 2341070 12846080 Q7A_2271 Methylophaga nitratireducenticrescens Poly(A) polymerase YP_006296726.1 2339697 R 754476 CDS YP_006296727.1 387128122 12846081 complement(2341122..2341694) 1 NC_017857.1 PFAM: Ribonuclease HII; ribonuclease HII 2341694 12846081 Q7A_2272 Methylophaga nitratireducenticrescens ribonuclease HII YP_006296727.1 2341122 R 754476 CDS YP_006296728.1 387128123 12846082 complement(2341694..2342824) 1 NC_017857.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 2342824 12846082 Q7A_2273 Methylophaga nitratireducenticrescens lipid-A-disaccharide synthase YP_006296728.1 2341694 R 754476 CDS YP_006296729.1 387128124 12846083 complement(2342835..2343941) 1 NC_017857.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2343941 12846083 Q7A_2274 Methylophaga nitratireducenticrescens 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006296729.1 2342835 R 754476 CDS YP_006296730.1 387128125 12846084 complement(2343942..2344583) 1 NC_017857.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 2344583 12846084 Q7A_2275 Methylophaga nitratireducenticrescens riboflavin synthase subunit alpha YP_006296730.1 2343942 R 754476 CDS YP_006296731.1 387128126 12846085 complement(2344586..2345683) 1 NC_017857.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase 2345683 12846085 Q7A_2276 Methylophaga nitratireducenticrescens Diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_006296731.1 2344586 R 754476 CDS YP_006296732.1 387128127 12846086 complement(2345771..2346244) 1 NC_017857.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; ribonucleotide reductase transcriptional regulator NrdR 2346244 12846086 Q7A_2277 Methylophaga nitratireducenticrescens ribonucleotide reductase transcriptional regulator NrdR YP_006296732.1 2345771 R 754476 CDS YP_006296733.1 387128128 12846087 complement(2346259..2347512) 1 NC_017857.1 PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase 2347512 12846087 Q7A_2278 Methylophaga nitratireducenticrescens serine hydroxymethyltransferase YP_006296733.1 2346259 R 754476 CDS YP_006296734.1 387128129 12846088 2347617..2348480 1 NC_017857.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 2-hydroxy-3-oxopropionate reductase 2348480 12846088 Q7A_2279 Methylophaga nitratireducenticrescens 2-hydroxy-3-oxopropionate reductase YP_006296734.1 2347617 D 754476 CDS YP_006296735.1 387128130 12846089 complement(2348538..2349833) 1 NC_017857.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 2349833 12846089 Q7A_2280 Methylophaga nitratireducenticrescens adenylosuccinate synthetase YP_006296735.1 2348538 R 754476 CDS YP_006296736.1 387128131 12846090 complement(2349826..2351016) 1 NC_017857.1 TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 2351016 12846090 Q7A_2281 Methylophaga nitratireducenticrescens ATP phosphoribosyltransferase regulatory subunit YP_006296736.1 2349826 R 754476 CDS YP_006296737.1 387128132 12846091 complement(2351022..2351174) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2065); hypothetical protein 2351174 12846091 Q7A_2282 Methylophaga nitratireducenticrescens hypothetical protein YP_006296737.1 2351022 R 754476 CDS YP_006296738.1 387128133 12846092 complement(2351216..2352088) 1 NC_017857.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 2352088 12846092 Q7A_2283 Methylophaga nitratireducenticrescens HflC protein YP_006296738.1 2351216 R 754476 CDS YP_006296739.1 387128134 12846093 complement(2352091..2353299) 1 NC_017857.1 PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 2353299 12846093 Q7A_2284 Methylophaga nitratireducenticrescens HflK protein YP_006296739.1 2352091 R 754476 CDS YP_006296740.1 387128135 12846094 complement(2353394..2354539) 1 NC_017857.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX 2354539 12846094 Q7A_2285 Methylophaga nitratireducenticrescens GTP-binding protein HflX YP_006296740.1 2353394 R 754476 CDS YP_006296741.1 387128136 12846095 complement(2354553..2354777) 1 NC_017857.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq 2354777 12846095 Q7A_2286 Methylophaga nitratireducenticrescens RNA-binding protein Hfq YP_006296741.1 2354553 R 754476 CDS YP_006296742.1 387128137 12846096 complement(2354854..2355810) 1 NC_017857.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2355810 12846096 Q7A_2287 Methylophaga nitratireducenticrescens tRNA delta(2)-isopentenylpyrophosphate transferase YP_006296742.1 2354854 R 754476 CDS YP_006296743.1 387128138 12846097 complement(2355819..2357078) 1 NC_017857.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho 2357078 12846097 Q7A_2288 Methylophaga nitratireducenticrescens transcription termination factor Rho YP_006296743.1 2355819 R 754476 CDS YP_006296744.1 387128139 12846098 2357328..2357891 1 NC_017857.1 PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; Starvation lipoprotein Slp-like protein 2357891 12846098 Q7A_2289 Methylophaga nitratireducenticrescens Starvation lipoprotein Slp-like protein YP_006296744.1 2357328 D 754476 CDS YP_006296745.1 387128140 12846103 complement(2362615..2362737) 1 NC_017857.1 hypothetical protein 2362737 12846103 Q7A_2294 Methylophaga nitratireducenticrescens hypothetical protein YP_006296745.1 2362615 R 754476 CDS YP_006296746.1 387128141 12846106 complement(2364788..2365114) 1 NC_017857.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 2365114 12846106 Q7A_2297 Methylophaga nitratireducenticrescens 50S ribosomal protein L17 YP_006296746.1 2364788 R 754476 CDS YP_006296747.1 387128142 12846107 complement(2365210..2366193) 1 NC_017857.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 2366193 12846107 Q7A_2298 Methylophaga nitratireducenticrescens DNA-directed RNA polymerase subunit alpha YP_006296747.1 2365210 R 754476 CDS YP_006296748.1 387128143 12846108 complement(2366234..2366854) 1 NC_017857.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 2366854 12846108 Q7A_2299 Methylophaga nitratireducenticrescens 30S ribosomal protein S4 YP_006296748.1 2366234 R 754476 CDS YP_006296749.1 387128144 12846109 complement(2366876..2367265) 1 NC_017857.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 2367265 12846109 Q7A_2300 Methylophaga nitratireducenticrescens 30S ribosomal protein S11 YP_006296749.1 2366876 R 754476 CDS YP_006296750.1 387128145 12846110 complement(2367280..2367633) 1 NC_017857.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 2367633 12846110 Q7A_2301 Methylophaga nitratireducenticrescens 30S ribosomal protein S13 YP_006296750.1 2367280 R 754476 CDS YP_006296751.1 387128146 12846111 complement(2367863..2369215) 1 NC_017857.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; preprotein translocase subunit SecY 2369215 12846111 Q7A_2302 Methylophaga nitratireducenticrescens preprotein translocase subunit SecY YP_006296751.1 2367863 R 754476 CDS YP_006296752.1 387128147 12846112 complement(2369221..2369655) 1 NC_017857.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 2369655 12846112 Q7A_2303 Methylophaga nitratireducenticrescens 50S ribosomal protein L15 YP_006296752.1 2369221 R 754476 CDS YP_006296753.1 387128148 12846113 complement(2369658..2369846) 1 NC_017857.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 2369846 12846113 Q7A_2304 Methylophaga nitratireducenticrescens 50S ribosomal protein L30 YP_006296753.1 2369658 R 754476 CDS YP_006296754.1 387128149 12846114 complement(2369851..2370360) 1 NC_017857.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 2370360 12846114 Q7A_2305 Methylophaga nitratireducenticrescens 30S ribosomal protein S5 YP_006296754.1 2369851 R 754476 CDS YP_006296755.1 387128150 12846115 complement(2370379..2370732) 1 NC_017857.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 2370732 12846115 Q7A_2306 Methylophaga nitratireducenticrescens 50S ribosomal protein L18 YP_006296755.1 2370379 R 754476 CDS YP_006296756.1 387128151 12846116 complement(2370745..2371278) 1 NC_017857.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 2371278 12846116 Q7A_2307 Methylophaga nitratireducenticrescens 50S ribosomal protein L6 YP_006296756.1 2370745 R 754476 CDS YP_006296757.1 387128152 12846117 complement(2371302..2371697) 1 NC_017857.1 PFAM: Ribosomal protein S8; 30S ribosomal protein S8 2371697 12846117 Q7A_2308 Methylophaga nitratireducenticrescens 30S ribosomal protein S8 YP_006296757.1 2371302 R 754476 CDS YP_006296758.1 387128153 12846118 complement(2371728..2372033) 1 NC_017857.1 PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 2372033 12846118 Q7A_2309 Methylophaga nitratireducenticrescens 30S ribosomal protein S14 YP_006296758.1 2371728 R 754476 CDS YP_006296759.1 387128154 12846119 complement(2372057..2372596) 1 NC_017857.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 2372596 12846119 Q7A_2310 Methylophaga nitratireducenticrescens 50S ribosomal protein L5 YP_006296759.1 2372057 R 754476 CDS YP_006296760.1 387128155 12846120 complement(2372618..2372935) 1 NC_017857.1 TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 2372935 12846120 Q7A_2311 Methylophaga nitratireducenticrescens 50S ribosomal protein L24 YP_006296760.1 2372618 R 754476 CDS YP_006296761.1 387128156 12846121 complement(2373059..2373319) 1 NC_017857.1 PFAM: Ribosomal protein L14p/L23e; 50S ribosomal protein L14 2373319 12846121 Q7A_2312 Methylophaga nitratireducenticrescens 50S ribosomal protein L14 YP_006296761.1 2373059 R 754476 CDS YP_006296762.1 387128157 12846122 complement(2373347..2373607) 1 NC_017857.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 2373607 12846122 Q7A_2313 Methylophaga nitratireducenticrescens 30S ribosomal protein S17 YP_006296762.1 2373347 R 754476 CDS YP_006296763.1 387128158 12846123 complement(2373617..2373802) 1 NC_017857.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 2373802 12846123 Q7A_2314 Methylophaga nitratireducenticrescens 50S ribosomal protein L29 YP_006296763.1 2373617 R 754476 CDS YP_006296764.1 387128159 12846124 complement(2373802..2374215) 1 NC_017857.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 2374215 12846124 Q7A_2315 Methylophaga nitratireducenticrescens 50S ribosomal protein L16 YP_006296764.1 2373802 R 754476 CDS YP_006296765.1 387128160 12846125 complement(2374227..2374793) 1 NC_017857.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 2374793 12846125 Q7A_2316 Methylophaga nitratireducenticrescens 30S ribosomal protein S3 YP_006296765.1 2374227 R 754476 CDS YP_006296766.1 387128161 12846126 complement(2374899..2375231) 1 NC_017857.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 2375231 12846126 Q7A_2317 Methylophaga nitratireducenticrescens 50S ribosomal protein L22 YP_006296766.1 2374899 R 754476 CDS YP_006296767.1 387128162 12846127 complement(2375241..2375402) 1 NC_017857.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 2375402 12846127 Q7A_2318 Methylophaga nitratireducenticrescens 30S ribosomal protein S19 YP_006296767.1 2375241 R 754476 CDS YP_006296768.1 387128163 12846128 complement(2375534..2376361) 1 NC_017857.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 2376361 12846128 Q7A_2319 Methylophaga nitratireducenticrescens 50S ribosomal protein L2 YP_006296768.1 2375534 R 754476 CDS YP_006296769.1 387128164 12846129 complement(2376388..2376681) 1 NC_017857.1 PFAM: Ribosomal protein L23; 50S ribosomal protein L23 2376681 12846129 Q7A_2320 Methylophaga nitratireducenticrescens 50S ribosomal protein L23 YP_006296769.1 2376388 R 754476 CDS YP_006296770.1 387128165 12846130 complement(2376678..2377295) 1 NC_017857.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 2377295 12846130 Q7A_2321 Methylophaga nitratireducenticrescens 50S ribosomal protein L4 YP_006296770.1 2376678 R 754476 CDS YP_006296771.1 387128166 12846131 complement(2377319..2377951) 1 NC_017857.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 2377951 12846131 Q7A_2322 Methylophaga nitratireducenticrescens 50S ribosomal protein L3 YP_006296771.1 2377319 R 754476 CDS YP_006296772.1 387128167 12846132 complement(2377965..2378279) 1 NC_017857.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 2378279 12846132 Q7A_2323 Methylophaga nitratireducenticrescens 30S ribosomal protein S10 YP_006296772.1 2377965 R 754476 CDS YP_006296773.1 387128168 12846133 complement(2378285..2379475) 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2379475 12846133 Q7A_2324 Methylophaga nitratireducenticrescens translation elongation factor Tu YP_006296773.1 2378285 R 754476 CDS YP_006296774.1 387128169 12846134 complement(2379500..2381554) 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G 2381554 12846134 Q7A_2325 Methylophaga nitratireducenticrescens translation elongation factor G YP_006296774.1 2379500 R 754476 CDS YP_006296775.1 387128170 12846135 complement(2381674..2382144) 1 NC_017857.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 2382144 12846135 Q7A_2326 Methylophaga nitratireducenticrescens 30S ribosomal protein S7 YP_006296775.1 2381674 R 754476 CDS YP_006296776.1 387128171 12846136 complement(2382191..2382565) 1 NC_017857.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 2382565 12846136 Q7A_2327 Methylophaga nitratireducenticrescens 30S ribosomal protein S12 YP_006296776.1 2382191 R 754476 CDS YP_006296777.1 387128172 12846137 complement(2382719..2386912) 1 NC_017857.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 2386912 12846137 Q7A_2328 Methylophaga nitratireducenticrescens DNA-directed RNA polymerase subunit beta' YP_006296777.1 2382719 R 754476 CDS YP_006296778.1 387128173 12846138 complement(2386968..2391044) 1 NC_017857.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 2391044 12846138 Q7A_2329 Methylophaga nitratireducenticrescens DNA-directed RNA polymerase subunit beta YP_006296778.1 2386968 R 754476 CDS YP_006296779.1 387128174 12846139 complement(2391214..2391588) 1 NC_017857.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2391588 12846139 Q7A_2330 Methylophaga nitratireducenticrescens 50S ribosomal protein L7/L12 YP_006296779.1 2391214 R 754476 CDS YP_006296780.1 387128175 12846140 complement(2391647..2392174) 1 NC_017857.1 PFAM: Ribosomal protein L10; 50S ribosomal protein L10 2392174 12846140 Q7A_2331 Methylophaga nitratireducenticrescens 50S ribosomal protein L10 YP_006296780.1 2391647 R 754476 CDS YP_006296781.1 387128176 12846141 complement(2392386..2393078) 1 NC_017857.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 2393078 12846141 Q7A_2332 Methylophaga nitratireducenticrescens 50S ribosomal protein L1 YP_006296781.1 2392386 R 754476 CDS YP_006296782.1 387128177 12846142 complement(2393079..2393513) 1 NC_017857.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 2393513 12846142 Q7A_2333 Methylophaga nitratireducenticrescens 50S ribosomal protein L11 YP_006296782.1 2393079 R 754476 CDS YP_006296783.1 387128178 12846143 complement(2393589..2394122) 1 NC_017857.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein NusG 2394122 12846143 Q7A_2334 Methylophaga nitratireducenticrescens transcription antitermination protein NusG YP_006296783.1 2393589 R 754476 CDS YP_006296784.1 387128179 12846144 complement(2394136..2394474) 1 NC_017857.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE 2394474 12846144 Q7A_2335 Methylophaga nitratireducenticrescens preprotein translocase subunit SecE YP_006296784.1 2394136 R 754476 CDS YP_006296785.1 387128180 12846146 complement(2394643..2395833) 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor Tu 2395833 12846146 Q7A_2337 Methylophaga nitratireducenticrescens translation elongation factor Tu YP_006296785.1 2394643 R 754476 CDS YP_006296786.1 387128181 12846150 2396360..2396905 1 NC_017857.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease HslV 2396905 12846150 Q7A_2341 Methylophaga nitratireducenticrescens ATP-dependent protease HslV YP_006296786.1 2396360 D 754476 CDS YP_006296787.1 387128182 12846151 2396905..2398233 1 NC_017857.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; ATP-dependent hsl protease ATP-binding subunit HslU 2398233 12846151 Q7A_2342 Methylophaga nitratireducenticrescens ATP-dependent hsl protease ATP-binding subunit HslU YP_006296787.1 2396905 D 754476 CDS YP_006296788.1 387128183 12846152 2398242..2398607 1 NC_017857.1 PFAM: Protein of unknown function (DUF971); hypothetical protein 2398607 12846152 Q7A_2343 Methylophaga nitratireducenticrescens hypothetical protein YP_006296788.1 2398242 D 754476 CDS YP_006296789.1 387128184 12846153 2398615..2399361 1 NC_017857.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 2399361 12846153 Q7A_2344 Methylophaga nitratireducenticrescens Ubiquinone/menaquinone biosynthesis methyltransferase UbiE YP_006296789.1 2398615 D 754476 CDS YP_006296790.1 387128185 12846154 2399365..2399967 1 NC_017857.1 PFAM: SCP-2 sterol transfer family; protein YigP 2399967 12846154 Q7A_2345 Methylophaga nitratireducenticrescens protein YigP YP_006296790.1 2399365 D 754476 CDS YP_006296791.1 387128186 12846155 2399964..2401631 1 NC_017857.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; Ubiquinone biosynthesis monooxygenase UbiB 2401631 12846155 Q7A_2346 Methylophaga nitratireducenticrescens Ubiquinone biosynthesis monooxygenase UbiB YP_006296791.1 2399964 D 754476 CDS YP_006296792.1 387128187 12846156 complement(2401632..2403299) 1 NC_017857.1 PFAM: Formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase 2403299 12846156 Q7A_2347 Methylophaga nitratireducenticrescens formate--tetrahydrofolate ligase YP_006296792.1 2401632 R 754476 CDS YP_006296793.1 387128188 12846157 complement(2403372..2403980) 1 NC_017857.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX 2403980 12846157 Q7A_2348 Methylophaga nitratireducenticrescens 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX YP_006296793.1 2403372 R 754476 CDS YP_006296794.1 387128189 12846220 complement(2403973..2405328) 1 NC_017857.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2405328 12846220 Q7A_2349 Methylophaga nitratireducenticrescens UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_006296794.1 2403973 R 754476 CDS YP_006296795.1 387128190 12846221 complement(2405329..2405841) 1 NC_017857.1 hypothetical protein 2405841 12846221 Q7A_2350 Methylophaga nitratireducenticrescens hypothetical protein YP_006296795.1 2405329 R 754476 CDS YP_006296796.1 387128191 12846222 complement(2405964..2406920) 1 NC_017857.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat; PQQ-dependent catabolism-associated beta-propeller protein 2406920 12846222 Q7A_2351 Methylophaga nitratireducenticrescens PQQ-dependent catabolism-associated beta-propeller protein YP_006296796.1 2405964 R 754476 CDS YP_006296797.1 387128192 12846223 complement(2406943..2407182) 1 NC_017857.1 hypothetical protein 2407182 12846223 Q7A_2352 Methylophaga nitratireducenticrescens hypothetical protein YP_006296797.1 2406943 R 754476 CDS YP_006296798.1 387128193 12846224 2407654..2407905 1 NC_017857.1 hypothetical protein 2407905 12846224 Q7A_2353 Methylophaga nitratireducenticrescens hypothetical protein YP_006296798.1 2407654 D 754476 CDS YP_006296799.1 387128194 12846225 complement(2408375..2409325) 1 NC_017857.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecF 2409325 12846225 Q7A_2354 Methylophaga nitratireducenticrescens protein-export membrane protein SecF YP_006296799.1 2408375 R 754476 CDS YP_006296800.1 387128195 12846226 complement(2409342..2411198) 1 NC_017857.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD 2411198 12846226 Q7A_2355 Methylophaga nitratireducenticrescens protein-export membrane protein SecD YP_006296800.1 2409342 R 754476 CDS YP_006296801.1 387128196 12846227 complement(2411248..2411577) 1 NC_017857.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC 2411577 12846227 Q7A_2356 Methylophaga nitratireducenticrescens preprotein translocase subunit YajC YP_006296801.1 2411248 R 754476 CDS YP_006296802.1 387128197 12846228 complement(2411652..2412758) 1 NC_017857.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 2412758 12846228 Q7A_2357 Methylophaga nitratireducenticrescens tRNA-guanine transglycosylase YP_006296802.1 2411652 R 754476 CDS YP_006296803.1 387128198 12846229 2412881..2413573 1 NC_017857.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; Orotidine 5'-phosphate decarboxylase 2413573 12846229 Q7A_2358 Methylophaga nitratireducenticrescens Orotidine 5'-phosphate decarboxylase YP_006296803.1 2412881 D 754476 CDS YP_006296804.1 387128199 12846230 complement(2413646..2414803) 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2414803 12846230 Q7A_2359 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006296804.1 2413646 R 754476 CDS YP_006296805.1 387128200 12846231 complement(2414879..2416150) 1 NC_017857.1 PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK 2416150 12846231 Q7A_2360 Methylophaga nitratireducenticrescens flagellar hook-length control protein FliK YP_006296805.1 2414879 R 754476 CDS YP_006296806.1 387128201 12846232 complement(2416233..2417579) 1 NC_017857.1 PFAM: Globin; Methyl-accepting chemotaxis protein (MCP) signaling domain; hemoglobin 2417579 12846232 Q7A_2361 Methylophaga nitratireducenticrescens hemoglobin YP_006296806.1 2416233 R 754476 CDS YP_006296807.1 387128202 12846233 complement(2417579..2418295) 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning protein transcriptional regulator 2418295 12846233 Q7A_2362 Methylophaga nitratireducenticrescens chromosome partitioning protein transcriptional regulator YP_006296807.1 2417579 R 754476 CDS YP_006296808.1 387128203 12846234 complement(2418299..2418763) 1 NC_017857.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 2418763 12846234 Q7A_2363 Methylophaga nitratireducenticrescens chemotaxis signal transduction protein YP_006296808.1 2418299 R 754476 CDS YP_006296809.1 387128204 12846235 complement(2418760..2420652) 1 NC_017857.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; signal transduction histidine kinase 2420652 12846235 Q7A_2364 Methylophaga nitratireducenticrescens signal transduction histidine kinase YP_006296809.1 2418760 R 754476 CDS YP_006296810.1 387128205 12846236 complement(2420665..2421027) 1 NC_017857.1 PFAM: Response regulator receiver domain; chemotaxis regulator 2421027 12846236 Q7A_2365 Methylophaga nitratireducenticrescens chemotaxis regulator YP_006296810.1 2420665 R 754476 CDS YP_006296811.1 387128206 12846237 complement(2421029..2421277) 1 NC_017857.1 PFAM: STAS domain; anti-anti-sigma regulatory factor 2421277 12846237 Q7A_2366 Methylophaga nitratireducenticrescens anti-anti-sigma regulatory factor YP_006296811.1 2421029 R 754476 CDS YP_006296812.1 387128207 12846238 complement(2421483..2421899) 1 NC_017857.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar protein FliJ 2421899 12846238 Q7A_2367 Methylophaga nitratireducenticrescens flagellar protein FliJ YP_006296812.1 2421483 R 754476 CDS YP_006296813.1 387128208 12846239 complement(2421964..2423382) 1 NC_017857.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; flagellum-specific ATP synthase FliI 2423382 12846239 Q7A_2368 Methylophaga nitratireducenticrescens flagellum-specific ATP synthase FliI YP_006296813.1 2421964 R 754476 CDS YP_006296814.1 387128209 12846240 complement(2423369..2424055) 1 NC_017857.1 PFAM: Flagellar assembly protein FliH; flagellar assembly protein FliH 2424055 12846240 Q7A_2369 Methylophaga nitratireducenticrescens flagellar assembly protein FliH YP_006296814.1 2423369 R 754476 CDS YP_006296815.1 387128210 12846241 complement(2424042..2425052) 1 NC_017857.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2425052 12846241 Q7A_2370 Methylophaga nitratireducenticrescens flagellar motor switch protein FliG YP_006296815.1 2424042 R 754476 CDS YP_006296816.1 387128211 12846242 complement(2425052..2426743) 1 NC_017857.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar M-ring protein FliF 2426743 12846242 Q7A_2371 Methylophaga nitratireducenticrescens flagellar M-ring protein FliF YP_006296816.1 2425052 R 754476 CDS YP_006296817.1 387128212 12846243 complement(2426773..2427105) 1 NC_017857.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 2427105 12846243 Q7A_2372 Methylophaga nitratireducenticrescens flagellar hook-basal body complex protein FliE YP_006296817.1 2426773 R 754476 CDS YP_006296818.1 387128213 12846244 complement(2427148..2428533) 1 NC_017857.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2428533 12846244 Q7A_2373 Methylophaga nitratireducenticrescens flagellar regulatory protein FleQ YP_006296818.1 2427148 R 754476 CDS YP_006296819.1 387128214 12846245 complement(2428530..2429717) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; flagellar sensor histidine kinase FleS 2429717 12846245 Q7A_2374 Methylophaga nitratireducenticrescens flagellar sensor histidine kinase FleS YP_006296819.1 2428530 R 754476 CDS YP_006296820.1 387128215 12846246 complement(2429846..2431333) 1 NC_017857.1 PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; flagellar regulatory protein FleQ 2431333 12846246 Q7A_2375 Methylophaga nitratireducenticrescens flagellar regulatory protein FleQ YP_006296820.1 2429846 R 754476 CDS YP_006296821.1 387128216 12846247 complement(2431474..2431791) 1 NC_017857.1 PFAM: Flagellar protein FliT; flagellar protein FliT 2431791 12846247 Q7A_2376 Methylophaga nitratireducenticrescens flagellar protein FliT YP_006296821.1 2431474 R 754476 CDS YP_006296822.1 387128217 12846248 complement(2431798..2432187) 1 NC_017857.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthesis protein FliS 2432187 12846248 Q7A_2377 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliS YP_006296822.1 2431798 R 754476 CDS YP_006296823.1 387128218 12846249 complement(2432217..2433578) 1 NC_017857.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif; flagellar hook-associated protein FliD 2433578 12846249 Q7A_2378 Methylophaga nitratireducenticrescens flagellar hook-associated protein FliD YP_006296823.1 2432217 R 754476 CDS YP_006296824.1 387128219 12846250 complement(2433626..2434027) 1 NC_017857.1 PFAM: FlaG protein; flagellar protein FlaG protein 2434027 12846250 Q7A_2379 Methylophaga nitratireducenticrescens flagellar protein FlaG protein YP_006296824.1 2433626 R 754476 CDS YP_006296825.1 387128220 12846251 complement(2434095..2434928) 1 NC_017857.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaA 2434928 12846251 Q7A_2380 Methylophaga nitratireducenticrescens flagellin protein FlaA YP_006296825.1 2434095 R 754476 CDS YP_006296826.1 387128221 12846252 complement(2435116..2435952) 1 NC_017857.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin protein FlaA 2435952 12846252 Q7A_2381 Methylophaga nitratireducenticrescens flagellin protein FlaA YP_006296826.1 2435116 R 754476 CDS YP_006296827.1 387128222 12846253 complement(2436114..2440289) 1 NC_017857.1 PFAM: Glycosyl transferase family 2; glycosyl transferase 2440289 12846253 Q7A_2382 Methylophaga nitratireducenticrescens glycosyl transferase YP_006296827.1 2436114 R 754476 CDS YP_006296828.1 387128223 12846254 complement(2440332..2441126) 1 NC_017857.1 PFAM: Cephalosporin hydroxylase; cephalosporin hydroxylase 2441126 12846254 Q7A_2383 Methylophaga nitratireducenticrescens cephalosporin hydroxylase YP_006296828.1 2440332 R 754476 CDS YP_006296829.1 387128224 12846255 complement(2441159..2442262) 1 NC_017857.1 TIGRFAM: methyltransferase, FkbM family; methyltransferase 2442262 12846255 Q7A_2384 Methylophaga nitratireducenticrescens methyltransferase YP_006296829.1 2441159 R 754476 CDS YP_006296830.1 387128225 12846256 complement(2442291..2443454) 1 NC_017857.1 PFAM: Methyltransferase domain; type 12 methyltransferase 2443454 12846256 Q7A_2385 Methylophaga nitratireducenticrescens type 12 methyltransferase YP_006296830.1 2442291 R 754476 CDS YP_006296831.1 387128226 12846257 complement(2443459..2444478) 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; Fe-S oxidoreductase 2444478 12846257 Q7A_2386 Methylophaga nitratireducenticrescens Fe-S oxidoreductase YP_006296831.1 2443459 R 754476 CDS YP_006296832.1 387128227 12846258 complement(2444468..2445667) 1 NC_017857.1 TIGRFAM: methyltransferase, FkbM family; methyltransferase 2445667 12846258 Q7A_2387 Methylophaga nitratireducenticrescens methyltransferase YP_006296832.1 2444468 R 754476 CDS YP_006296833.1 387128228 12846259 complement(2445661..2446941) 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase 2446941 12846259 Q7A_2388 Methylophaga nitratireducenticrescens glycosyl transferase YP_006296833.1 2445661 R 754476 CDS YP_006296834.1 387128229 12846260 complement(2446941..2447963) 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; hypothetical protein 2447963 12846260 Q7A_2389 Methylophaga nitratireducenticrescens hypothetical protein YP_006296834.1 2446941 R 754476 CDS YP_006296835.1 387128230 12846261 complement(2447988..2448833) 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; UDP-glucose 4-epimerase 2448833 12846261 Q7A_2390 Methylophaga nitratireducenticrescens UDP-glucose 4-epimerase YP_006296835.1 2447988 R 754476 CDS YP_006296836.1 387128231 12846262 complement(2448830..2450056) 1 NC_017857.1 PFAM: C-methyltransferase; Hypothetical methyltransferase; methyltransferase family protein 2450056 12846262 Q7A_2391 Methylophaga nitratireducenticrescens methyltransferase family protein YP_006296836.1 2448830 R 754476 CDS YP_006296837.1 387128232 12846263 complement(2450053..2450610) 1 NC_017857.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 2450610 12846263 Q7A_2392 Methylophaga nitratireducenticrescens dTDP-4-dehydrorhamnose 3,5-epimerase YP_006296837.1 2450053 R 754476 CDS YP_006296838.1 387128233 12846264 complement(2450607..2451707) 1 NC_017857.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase-like protein 2451707 12846264 Q7A_2393 Methylophaga nitratireducenticrescens CDP-glucose 4,6-dehydratase-like protein YP_006296838.1 2450607 R 754476 CDS YP_006296839.1 387128234 12846265 complement(2451671..2452438) 1 NC_017857.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 2452438 12846265 Q7A_2394 Methylophaga nitratireducenticrescens glucose-1-phosphate cytidylyltransferase YP_006296839.1 2451671 R 754476 CDS YP_006296840.1 387128235 12846266 complement(2452475..2453380) 1 NC_017857.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein FlgL 2453380 12846266 Q7A_2395 Methylophaga nitratireducenticrescens flagellar hook-associated protein FlgL YP_006296840.1 2452475 R 754476 CDS YP_006296841.1 387128236 12846267 complement(2453392..2454783) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 2454783 12846267 Q7A_2396 Methylophaga nitratireducenticrescens flagellar hook-associated protein FlgK YP_006296841.1 2453392 R 754476 CDS YP_006296842.1 387128237 12846268 complement(2454815..2455786) 1 NC_017857.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; flagellar protein FlgJ (peptidoglycan hydrolase) 2455786 12846268 Q7A_2397 Methylophaga nitratireducenticrescens flagellar protein FlgJ (peptidoglycan hydrolase) YP_006296842.1 2454815 R 754476 CDS YP_006296843.1 387128238 12846269 complement(2455793..2456890) 1 NC_017857.1 PFAM: Flagellar P-ring protein; flagellar P-ring protein FlgI 2456890 12846269 Q7A_2398 Methylophaga nitratireducenticrescens flagellar P-ring protein FlgI YP_006296843.1 2455793 R 754476 CDS YP_006296844.1 387128239 12846270 complement(2456901..2457728) 1 NC_017857.1 PFAM: Flagellar L-ring protein; flagellar L-ring protein FlgH 2457728 12846270 Q7A_2399 Methylophaga nitratireducenticrescens flagellar L-ring protein FlgH YP_006296844.1 2456901 R 754476 CDS YP_006296845.1 387128240 12846271 complement(2457762..2458547) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 2458547 12846271 Q7A_2400 Methylophaga nitratireducenticrescens flagellar basal-body rod protein FlgG YP_006296845.1 2457762 R 754476 CDS YP_006296846.1 387128241 12846272 complement(2458581..2459324) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgF 2459324 12846272 Q7A_2401 Methylophaga nitratireducenticrescens flagellar basal-body rod protein FlgF YP_006296846.1 2458581 R 754476 CDS YP_006296847.1 387128242 12846273 complement(2459370..2460656) 1 NC_017857.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook protein FlgE 2460656 12846273 Q7A_2402 Methylophaga nitratireducenticrescens flagellar hook protein FlgE YP_006296847.1 2459370 R 754476 CDS YP_006296848.1 387128243 12846274 complement(2460669..2461355) 1 NC_017857.1 PFAM: Flagellar hook capping protein; flagellar basal-body rod modification protein FlgD 2461355 12846274 Q7A_2403 Methylophaga nitratireducenticrescens flagellar basal-body rod modification protein FlgD YP_006296848.1 2460669 R 754476 CDS YP_006296849.1 387128244 12846275 complement(2461374..2461787) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 2461787 12846275 Q7A_2404 Methylophaga nitratireducenticrescens flagellar basal-body rod protein FlgC YP_006296849.1 2461374 R 754476 CDS YP_006296850.1 387128245 12846276 complement(2461794..2462195) 1 NC_017857.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 2462195 12846276 Q7A_2405 Methylophaga nitratireducenticrescens flagellar basal-body rod protein FlgB YP_006296850.1 2461794 R 754476 CDS YP_006296851.1 387128246 12846277 2462525..2463079 1 NC_017857.1 PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H; type IV fimbrial biogenesis protein FimT 2463079 12846277 Q7A_2406 Methylophaga nitratireducenticrescens type IV fimbrial biogenesis protein FimT YP_006296851.1 2462525 D 754476 CDS YP_006296852.1 387128247 12846278 2463073..2463543 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilV 2463543 12846278 Q7A_2407 Methylophaga nitratireducenticrescens type IV fimbrial biogenesis protein PilV YP_006296852.1 2463073 D 754476 CDS YP_006296853.1 387128248 12846279 2463540..2464604 1 NC_017857.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV fimbrial biogenesis protein PilW 2464604 12846279 Q7A_2408 Methylophaga nitratireducenticrescens type IV fimbrial biogenesis protein PilW YP_006296853.1 2463540 D 754476 CDS YP_006296854.1 387128249 12846280 2464613..2465140 1 NC_017857.1 type IV fimbrial biogenesis protein PilX 2465140 12846280 Q7A_2409 Methylophaga nitratireducenticrescens type IV fimbrial biogenesis protein PilX YP_006296854.1 2464613 D 754476 CDS YP_006296855.1 387128250 12846281 2465143..2468682 1 NC_017857.1 PFAM: Neisseria PilC protein; type IV fimbrial biogenesis protein PilY1 2468682 12846281 Q7A_2410 Methylophaga nitratireducenticrescens type IV fimbrial biogenesis protein PilY1 YP_006296855.1 2465143 D 754476 CDS YP_006296856.1 387128251 12846282 2468701..2468997 1 NC_017857.1 hypothetical protein 2468997 12846282 Q7A_2411 Methylophaga nitratireducenticrescens hypothetical protein YP_006296856.1 2468701 D 754476 CDS YP_006296857.1 387128252 12846283 2469012..2469401 1 NC_017857.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type IV pilus assembly protein PilE 2469401 12846283 Q7A_2412 Methylophaga nitratireducenticrescens type IV pilus assembly protein PilE YP_006296857.1 2469012 D 754476 CDS YP_006296858.1 387128253 12846284 complement(2469481..2470284) 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 2470284 12846284 Q7A_2413 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296858.1 2469481 R 754476 CDS YP_006296859.1 387128254 12846285 complement(2470415..2472418) 1 NC_017857.1 TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); hemagglutinin/hemolysin-like protein 2472418 12846285 Q7A_2414 Methylophaga nitratireducenticrescens hemagglutinin/hemolysin-like protein YP_006296859.1 2470415 R 754476 CDS YP_006296860.1 387128255 12846286 complement(2472649..2473071) 1 NC_017857.1 hypothetical protein 2473071 12846286 Q7A_2415 Methylophaga nitratireducenticrescens hypothetical protein YP_006296860.1 2472649 R 754476 CDS YP_006296861.1 387128256 12846287 complement(2473068..2473682) 1 NC_017857.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator SlmA 2473682 12846287 Q7A_2416 Methylophaga nitratireducenticrescens transcriptional regulator SlmA YP_006296861.1 2473068 R 754476 CDS YP_006296862.1 387128257 12846288 complement(2473679..2474584) 1 NC_017857.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; acetylglutamate kinase 2474584 12846288 Q7A_2417 Methylophaga nitratireducenticrescens acetylglutamate kinase YP_006296862.1 2473679 R 754476 CDS YP_006296863.1 387128258 12846289 complement(2474695..2476938) 1 NC_017857.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 2476938 12846289 Q7A_2418 Methylophaga nitratireducenticrescens phosphomannomutase YP_006296863.1 2474695 R 754476 CDS YP_006296864.1 387128259 12846290 complement(2477013..2477381) 1 NC_017857.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 2477381 12846290 Q7A_2419 Methylophaga nitratireducenticrescens deoxyuridine 5'-triphosphate nucleotidohydrolase YP_006296864.1 2477013 R 754476 CDS YP_006296865.1 387128260 12846291 complement(2477449..2478669) 1 NC_017857.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase 2478669 12846291 Q7A_2420 Methylophaga nitratireducenticrescens phosphopantothenoylcysteine decarboxylase / phosphopantothenoylcysteine synthetase YP_006296865.1 2477449 R 754476 CDS YP_006296866.1 387128261 12846292 complement(2478666..2480000) 1 NC_017857.1 PFAM: Ribonuclease BN-like family; Transcriptional regulator; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN 2480000 12846292 Q7A_2421 Methylophaga nitratireducenticrescens ribonuclease BN YP_006296866.1 2478666 R 754476 CDS YP_006296867.1 387128262 12846293 complement(2480033..2480791) 1 NC_017857.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein 2480791 12846293 Q7A_2422 Methylophaga nitratireducenticrescens dinuclear metal center protein YP_006296867.1 2480033 R 754476 CDS YP_006296868.1 387128263 12846294 2480843..2481526 1 NC_017857.1 transmembrane protein 2481526 12846294 Q7A_2423 Methylophaga nitratireducenticrescens transmembrane protein YP_006296868.1 2480843 D 754476 CDS YP_006296869.1 387128264 12846295 complement(2481523..2482356) 1 NC_017857.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; chemotaxis protein methyltransferase CheR 2482356 12846295 Q7A_2424 Methylophaga nitratireducenticrescens chemotaxis protein methyltransferase CheR YP_006296869.1 2481523 R 754476 CDS YP_006296870.1 387128265 12846296 2482459..2483325 1 NC_017857.1 PFAM: short chain dehydrogenase; NAD(P)-dependent oxidoreductase EC-YbbO 2483325 12846296 Q7A_2425 Methylophaga nitratireducenticrescens NAD(P)-dependent oxidoreductase EC-YbbO YP_006296870.1 2482459 D 754476 CDS YP_006296871.1 387128266 12846297 2483312..2483470 1 NC_017857.1 hypothetical protein 2483470 12846297 Q7A_2426 Methylophaga nitratireducenticrescens hypothetical protein YP_006296871.1 2483312 D 754476 CDS YP_006296872.1 387128267 12846298 complement(2483479..2483751) 1 NC_017857.1 PFAM: Transposase; ISxac3 transposase 2483751 12846298 Q7A_2427 Methylophaga nitratireducenticrescens ISxac3 transposase YP_006296872.1 2483479 R 754476 CDS YP_006296873.1 387128268 12846299 2484213..2485040 1 NC_017857.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; nitrite transporter from formate/nitrite family 2485040 12846299 Q7A_2428 Methylophaga nitratireducenticrescens nitrite transporter from formate/nitrite family YP_006296873.1 2484213 D 754476 CDS YP_006296874.1 387128269 12846300 2485115..2485555 1 NC_017857.1 PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase; cyanate hydratase 2485555 12846300 Q7A_2429 Methylophaga nitratireducenticrescens cyanate hydratase YP_006296874.1 2485115 D 754476 CDS YP_006296875.1 387128270 12846301 complement(2485594..2486442) 1 NC_017857.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate efflux transporter 2486442 12846301 Q7A_2430 Methylophaga nitratireducenticrescens formate efflux transporter YP_006296875.1 2485594 R 754476 CDS YP_006296876.1 387128271 12846302 complement(2486731..2489316) 1 NC_017857.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; clpB protein 2489316 12846302 Q7A_2431 Methylophaga nitratireducenticrescens clpB protein YP_006296876.1 2486731 R 754476 CDS YP_006296877.1 387128272 12846303 2489482..2490405 1 NC_017857.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 2490405 12846303 Q7A_2432 Methylophaga nitratireducenticrescens lipid A biosynthesis lauroyl acyltransferase YP_006296877.1 2489482 D 754476 CDS YP_006296878.1 387128273 12846304 2490537..2491496 1 NC_017857.1 PFAM: Protein of unknown function (DUF1022); hypothetical protein 2491496 12846304 Q7A_2433 Methylophaga nitratireducenticrescens hypothetical protein YP_006296878.1 2490537 D 754476 CDS YP_006296879.1 387128274 12846305 2491563..2492633 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 2492633 12846305 Q7A_2434 Methylophaga nitratireducenticrescens glycosyltransferase YP_006296879.1 2491563 D 754476 CDS YP_006296880.1 387128275 12846306 2492630..2493628 1 NC_017857.1 PFAM: Glycosyl transferases group 1; Poly(glycerol-phosphate) alpha-glucosyltransferase 2493628 12846306 Q7A_2435 Methylophaga nitratireducenticrescens Poly(glycerol-phosphate) alpha-glucosyltransferase YP_006296880.1 2492630 D 754476 CDS YP_006296881.1 387128276 12846307 2493625..2494527 1 NC_017857.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); ADP-heptose--lipooligosaccharide heptosyltransferase II 2494527 12846307 Q7A_2436 Methylophaga nitratireducenticrescens ADP-heptose--lipooligosaccharide heptosyltransferase II YP_006296881.1 2493625 D 754476 CDS YP_006296882.1 387128277 12846308 complement(2494519..2495766) 1 NC_017857.1 PFAM: O-Antigen ligase; O-Antigen Polymerase 2495766 12846308 Q7A_2437 Methylophaga nitratireducenticrescens O-Antigen Polymerase YP_006296882.1 2494519 R 754476 CDS YP_006296883.1 387128278 12846309 complement(2495834..2496508) 1 NC_017857.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2496508 12846309 Q7A_2438 Methylophaga nitratireducenticrescens 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006296883.1 2495834 R 754476 CDS YP_006296884.1 387128279 12846310 complement(2496505..2497131) 1 NC_017857.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; hypothetical protein 2497131 12846310 Q7A_2439 Methylophaga nitratireducenticrescens hypothetical protein YP_006296884.1 2496505 R 754476 CDS YP_006296885.1 387128280 12846311 complement(2497202..2498032) 1 NC_017857.1 PFAM: PHP domain; metal-dependent phosphoesterase 2498032 12846311 Q7A_2440 Methylophaga nitratireducenticrescens metal-dependent phosphoesterase YP_006296885.1 2497202 R 754476 CDS YP_006296886.1 387128281 12846312 2498085..2498678 1 NC_017857.1 PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A; intracellular septation protein IspA 2498678 12846312 Q7A_2441 Methylophaga nitratireducenticrescens intracellular septation protein IspA YP_006296886.1 2498085 D 754476 CDS YP_006296887.1 387128282 12846313 2498678..2498977 1 NC_017857.1 PFAM: YCII-related domain; YciL protein 2498977 12846313 Q7A_2442 Methylophaga nitratireducenticrescens YciL protein YP_006296887.1 2498678 D 754476 CDS YP_006296888.1 387128283 12846314 2498974..2499243 1 NC_017857.1 PFAM: BolA-like protein; cell division protein BolA 2499243 12846314 Q7A_2443 Methylophaga nitratireducenticrescens cell division protein BolA YP_006296888.1 2498974 D 754476 CDS YP_006296889.1 387128284 12846315 2499252..2501423 1 NC_017857.1 PFAM: PilZ domain; hypothetical protein 2501423 12846315 Q7A_2444 Methylophaga nitratireducenticrescens hypothetical protein YP_006296889.1 2499252 D 754476 CDS YP_006296890.1 387128285 12846316 complement(2501450..2502775) 1 NC_017857.1 PFAM: Putative modulator of DNA gyrase; TldE/PmbA protein 2502775 12846316 Q7A_2445 Methylophaga nitratireducenticrescens TldE/PmbA protein YP_006296890.1 2501450 R 754476 CDS YP_006296891.1 387128286 12846317 complement(2502772..2503131) 1 NC_017857.1 mov34/MPN/PAD-1 family protein 2503131 12846317 Q7A_2446 Methylophaga nitratireducenticrescens mov34/MPN/PAD-1 family protein YP_006296891.1 2502772 R 754476 CDS YP_006296892.1 387128287 12846318 complement(2503183..2503941) 1 NC_017857.1 PFAM: MoeZ/MoeB domain; ThiF family; sulfur carrier protein adenylyltransferase ThiF 2503941 12846318 Q7A_2447 Methylophaga nitratireducenticrescens sulfur carrier protein adenylyltransferase ThiF YP_006296892.1 2503183 R 754476 CDS YP_006296893.1 387128288 12846319 complement(2503953..2504801) 1 NC_017857.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; polypeptide chain release factor methylase 2504801 12846319 Q7A_2448 Methylophaga nitratireducenticrescens polypeptide chain release factor methylase YP_006296893.1 2503953 R 754476 CDS YP_006296894.1 387128289 12846320 complement(2504816..2505862) 1 NC_017857.1 PFAM: Response regulator receiver domain; response regulator 2505862 12846320 Q7A_2449 Methylophaga nitratireducenticrescens response regulator YP_006296894.1 2504816 R 754476 CDS YP_006296895.1 387128290 12846321 complement(2505882..2506193) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3301); hypothetical protein 2506193 12846321 Q7A_2450 Methylophaga nitratireducenticrescens hypothetical protein YP_006296895.1 2505882 R 754476 CDS YP_006296896.1 387128291 12846322 complement(2506190..2506918) 1 NC_017857.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; ribosomal RNA small subunit methyltransferase E 2506918 12846322 Q7A_2451 Methylophaga nitratireducenticrescens ribosomal RNA small subunit methyltransferase E YP_006296896.1 2506190 R 754476 CDS YP_006296897.1 387128292 12846323 2506992..2507813 1 NC_017857.1 PFAM: Inositol monophosphatase family; inositol-1-monophosphatase 2507813 12846323 Q7A_2452 Methylophaga nitratireducenticrescens inositol-1-monophosphatase YP_006296897.1 2506992 D 754476 CDS YP_006296898.1 387128293 12846324 2507791..2508546 1 NC_017857.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 2508546 12846324 Q7A_2453 Methylophaga nitratireducenticrescens hypothetical protein YP_006296898.1 2507791 D 754476 CDS YP_006296899.1 387128294 12846325 2508585..2509391 1 NC_017857.1 PFAM: ZIP Zinc transporter; Zinc transporter, ZIP family 2509391 12846325 Q7A_2454 Methylophaga nitratireducenticrescens Zinc transporter, ZIP family YP_006296899.1 2508585 D 754476 CDS YP_006296900.1 387128295 12846326 2509398..2510429 1 NC_017857.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; ADP-heptose--lipooligosaccharide heptosyltransferase II 2510429 12846326 Q7A_2455 Methylophaga nitratireducenticrescens ADP-heptose--lipooligosaccharide heptosyltransferase II YP_006296900.1 2509398 D 754476 CDS YP_006296901.1 387128296 12846327 2510500..2511645 1 NC_017857.1 PFAM: Glycosyl transferases group 1; glycosyl transferase in large core OS assembly cluster 2511645 12846327 Q7A_2456 Methylophaga nitratireducenticrescens glycosyl transferase in large core OS assembly cluster YP_006296901.1 2510500 D 754476 CDS YP_006296902.1 387128297 12846328 complement(2511652..2512893) 1 NC_017857.1 PFAM: O-Antigen ligase; O-antigen polymerase family protein/toluene tolerance protein 2512893 12846328 Q7A_2457 Methylophaga nitratireducenticrescens O-antigen polymerase family protein/toluene tolerance protein YP_006296902.1 2511652 R 754476 CDS YP_006296903.1 387128298 12846329 2513181..2514104 1 NC_017857.1 hypothetical protein 2514104 12846329 Q7A_2458 Methylophaga nitratireducenticrescens hypothetical protein YP_006296903.1 2513181 D 754476 CDS YP_006296904.1 387128299 12846330 2514170..2515894 1 NC_017857.1 PFAM: Carbamoyltransferase; Carbamoyltransferase in large core OS assembly cluster 2515894 12846330 Q7A_2459 Methylophaga nitratireducenticrescens Carbamoyltransferase in large core OS assembly cluster YP_006296904.1 2514170 D 754476 CDS YP_006296905.1 387128300 12846331 complement(2515891..2516850) 1 NC_017857.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); ADP-heptose--LPS heptosyltransferase 2516850 12846331 Q7A_2460 Methylophaga nitratireducenticrescens ADP-heptose--LPS heptosyltransferase YP_006296905.1 2515891 R 754476 CDS YP_006296906.1 387128301 12846332 complement(2516891..2518018) 1 NC_017857.1 PFAM: Glycosyl transferases group 1; UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG 2518018 12846332 Q7A_2461 Methylophaga nitratireducenticrescens UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG YP_006296906.1 2516891 R 754476 CDS YP_006296907.1 387128302 12846333 complement(2518051..2519430) 1 NC_017857.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; Serine/threonine protein kinase 2519430 12846333 Q7A_2462 Methylophaga nitratireducenticrescens Serine/threonine protein kinase YP_006296907.1 2518051 R 754476 CDS YP_006296908.1 387128303 12846334 complement(2519436..2520245) 1 NC_017857.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase 2520245 12846334 Q7A_2463 Methylophaga nitratireducenticrescens lipopolysaccharide core biosynthesis protein WaaP , heptosyl-I-kinase YP_006296908.1 2519436 R 754476 CDS YP_006296909.1 387128304 12846335 2520352..2520915 1 NC_017857.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; phosphoheptose isomerase 1 2520915 12846335 Q7A_2464 Methylophaga nitratireducenticrescens phosphoheptose isomerase 1 YP_006296909.1 2520352 D 754476 CDS YP_006296910.1 387128305 12846336 2520912..2522111 1 NC_017857.1 PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 2522111 12846336 Q7A_2465 Methylophaga nitratireducenticrescens glycerol-3-phosphate dehydrogenase YP_006296910.1 2520912 D 754476 CDS YP_006296911.1 387128306 12846337 2522108..2522914 1 NC_017857.1 PFAM: Aldo/keto reductase family; oxidoreductase 2522914 12846337 Q7A_2466 Methylophaga nitratireducenticrescens oxidoreductase YP_006296911.1 2522108 D 754476 CDS YP_006296912.1 387128307 12846338 complement(2523242..2523532) 1 NC_017857.1 hypothetical protein 2523532 12846338 Q7A_2467 Methylophaga nitratireducenticrescens hypothetical protein YP_006296912.1 2523242 R 754476 CDS YP_006296913.1 387128308 12846339 complement(2523525..2523746) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3423); hypothetical protein 2523746 12846339 Q7A_2468 Methylophaga nitratireducenticrescens hypothetical protein YP_006296913.1 2523525 R 754476 CDS YP_006296914.1 387128309 12846340 2524003..2524191 1 NC_017857.1 PFAM: Phd_YefM; prevent-host-death family protein 2524191 12846340 Q7A_2469 Methylophaga nitratireducenticrescens prevent-host-death family protein YP_006296914.1 2524003 D 754476 CDS YP_006296915.1 387128310 12846341 2525119..2525337 1 NC_017857.1 hypothetical protein 2525337 12846341 Q7A_2470 Methylophaga nitratireducenticrescens hypothetical protein YP_006296915.1 2525119 D 754476 CDS YP_006296916.1 387128311 12846342 2525363..2525869 1 NC_017857.1 hypothetical protein 2525869 12846342 Q7A_2471 Methylophaga nitratireducenticrescens hypothetical protein YP_006296916.1 2525363 D 754476 CDS YP_006296917.1 387128312 12846343 complement(2526692..2526832) 1 NC_017857.1 hypothetical protein 2526832 12846343 Q7A_2472 Methylophaga nitratireducenticrescens hypothetical protein YP_006296917.1 2526692 R 754476 CDS YP_006296918.1 387128313 12846344 2526841..2527269 1 NC_017857.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; ligB family enzyme 2527269 12846344 Q7A_2473 Methylophaga nitratireducenticrescens ligB family enzyme YP_006296918.1 2526841 D 754476 CDS YP_006296919.1 387128314 12846345 complement(2527285..2527602) 1 NC_017857.1 PFAM: CcdB protein; CcdB-like toxin protein 2527602 12846345 Q7A_2474 Methylophaga nitratireducenticrescens CcdB-like toxin protein YP_006296919.1 2527285 R 754476 CDS YP_006296920.1 387128315 12846346 complement(2527602..2527847) 1 NC_017857.1 PFAM: Post-segregation antitoxin CcdA; acetoacetyl-CoA synthase 2527847 12846346 Q7A_2475 Methylophaga nitratireducenticrescens acetoacetyl-CoA synthase YP_006296920.1 2527602 R 754476 CDS YP_006296921.1 387128316 12846347 complement(2528036..2529481) 1 NC_017857.1 PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase 2529481 12846347 Q7A_2476 Methylophaga nitratireducenticrescens ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase YP_006296921.1 2528036 R 754476 CDS YP_006296922.1 387128317 12846348 complement(2529512..2530549) 1 NC_017857.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 2530549 12846348 Q7A_2477 Methylophaga nitratireducenticrescens lipopolysaccharide heptosyltransferase I YP_006296922.1 2529512 R 754476 CDS YP_006296923.1 387128318 12846349 complement(2530578..2531534) 1 NC_017857.1 PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type; Homoserine kinase 2531534 12846349 Q7A_2478 Methylophaga nitratireducenticrescens Homoserine kinase YP_006296923.1 2530578 R 754476 CDS YP_006296924.1 387128319 12846350 complement(2531562..2531798) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2782); hypothetical protein 2531798 12846350 Q7A_2479 Methylophaga nitratireducenticrescens hypothetical protein YP_006296924.1 2531562 R 754476 CDS YP_006296925.1 387128320 12846351 2531990..2534704 1 NC_017857.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I 2534704 12846351 Q7A_2480 Methylophaga nitratireducenticrescens DNA polymerase I YP_006296925.1 2531990 D 754476 CDS YP_006296926.1 387128321 12846352 complement(2535180..2537117) 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2537117 12846352 Q7A_2481 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein YP_006296926.1 2535180 R 754476 CDS YP_006296927.1 387128322 12846353 complement(2537173..2538246) 1 NC_017857.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Epoxyqueuosine (oQ) reductase QueG 2538246 12846353 Q7A_2482 Methylophaga nitratireducenticrescens Epoxyqueuosine (oQ) reductase QueG YP_006296927.1 2537173 R 754476 CDS YP_006296928.1 387128323 12846354 2538293..2539783 1 NC_017857.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein 2539783 12846354 Q7A_2483 Methylophaga nitratireducenticrescens yjeF-like protein YP_006296928.1 2538293 D 754476 CDS YP_006296929.1 387128324 12846355 2539783..2540235 1 NC_017857.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; ATPase YjeE 2540235 12846355 Q7A_2484 Methylophaga nitratireducenticrescens ATPase YjeE YP_006296929.1 2539783 D 754476 CDS YP_006296930.1 387128325 12846356 2540336..2541721 1 NC_017857.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain; N-acetylmuramoyl-L-alanine amidase 2541721 12846356 Q7A_2485 Methylophaga nitratireducenticrescens N-acetylmuramoyl-L-alanine amidase YP_006296930.1 2540336 D 754476 CDS YP_006296931.1 387128326 12846357 2541769..2543445 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 2543445 12846357 Q7A_2486 Methylophaga nitratireducenticrescens DNA mismatch repair protein MutL YP_006296931.1 2541769 D 754476 CDS YP_006296932.1 387128327 12846358 2543473..2544588 1 NC_017857.1 hypothetical protein 2544588 12846358 Q7A_2487 Methylophaga nitratireducenticrescens hypothetical protein YP_006296932.1 2543473 D 754476 CDS YP_006296933.1 387128328 12846359 complement(2544628..2547750) 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 2547750 12846359 Q7A_2488 Methylophaga nitratireducenticrescens heavy metal efflux pump YP_006296933.1 2544628 R 754476 CDS YP_006296934.1 387128329 12846360 complement(2547796..2548932) 1 NC_017857.1 hypothetical protein 2548932 12846360 Q7A_2489 Methylophaga nitratireducenticrescens hypothetical protein YP_006296934.1 2547796 R 754476 CDS YP_006296935.1 387128330 12846362 complement(2549086..2549235) 1 NC_017857.1 hypothetical protein 2549235 12846362 Q7A_2491 Methylophaga nitratireducenticrescens hypothetical protein YP_006296935.1 2549086 R 754476 CDS YP_006296936.1 387128331 12846363 complement(2549376..2549558) 1 NC_017857.1 hypothetical protein 2549558 12846363 Q7A_2492 Methylophaga nitratireducenticrescens hypothetical protein YP_006296936.1 2549376 R 754476 CDS YP_006296937.1 387128332 12846364 2549884..2551080 1 NC_017857.1 outer membrane protein (porin) 2551080 12846364 Q7A_2493 Methylophaga nitratireducenticrescens outer membrane protein (porin) YP_006296937.1 2549884 D 754476 CDS YP_006296938.1 387128333 12846365 2551263..2551898 1 NC_017857.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL 2551898 12846365 Q7A_2494 Methylophaga nitratireducenticrescens phosphoenolpyruvate-dihydroxyacetone phosphotransferase , ADP-binding subunit DhaL YP_006296938.1 2551263 D 754476 CDS YP_006296939.1 387128334 12846366 complement(2551950..2552321) 1 NC_017857.1 hypothetical protein 2552321 12846366 Q7A_2495 Methylophaga nitratireducenticrescens hypothetical protein YP_006296939.1 2551950 R 754476 CDS YP_006296940.1 387128335 12846367 complement(2552400..2553389) 1 NC_017857.1 PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK 2553389 12846367 Q7A_2496 Methylophaga nitratireducenticrescens phosphoenolpyruvate-dihydroxyacetone phosphotransferase , dihydroxyacetone binding subunit DhaK YP_006296940.1 2552400 R 754476 CDS YP_006296941.1 387128336 12846368 complement(2553408..2554241) 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD superfamily sugar phosphatase 2554241 12846368 Q7A_2497 Methylophaga nitratireducenticrescens HAD superfamily sugar phosphatase YP_006296941.1 2553408 R 754476 CDS YP_006296942.1 387128337 12846369 2554447..2555088 1 NC_017857.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 2555088 12846369 Q7A_2498 Methylophaga nitratireducenticrescens D-arabino-3-hexulose 6-phosphate formaldehyde lyase YP_006296942.1 2554447 D 754476 CDS YP_006296943.1 387128338 12846370 2555365..2555679 1 NC_017857.1 hypothetical protein 2555679 12846370 Q7A_2499 Methylophaga nitratireducenticrescens hypothetical protein YP_006296943.1 2555365 D 754476 CDS YP_006296944.1 387128339 12846371 2555823..2556806 1 NC_017857.1 PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase 2556806 12846371 Q7A_2500 Methylophaga nitratireducenticrescens transaldolase YP_006296944.1 2555823 D 754476 CDS YP_006296945.1 387128340 12846372 2556965..2557600 1 NC_017857.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: 3-hexulose-6-phosphate synthase; D-arabino-3-hexulose 6-phosphate formaldehyde lyase 2557600 12846372 Q7A_2501 Methylophaga nitratireducenticrescens D-arabino-3-hexulose 6-phosphate formaldehyde lyase YP_006296945.1 2556965 D 754476 CDS YP_006296946.1 387128341 12846373 2557612..2558151 1 NC_017857.1 PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase; 6-phospho 3-hexuloisomerase 2558151 12846373 Q7A_2502 Methylophaga nitratireducenticrescens 6-phospho 3-hexuloisomerase YP_006296946.1 2557612 D 754476 CDS YP_006296947.1 387128342 12846374 2558278..2559681 1 NC_017857.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 2559681 12846374 Q7A_2503 Methylophaga nitratireducenticrescens 3-isopropylmalate dehydratase large subunit YP_006296947.1 2558278 D 754476 CDS YP_006296948.1 387128343 12846375 2559681..2560643 1 NC_017857.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases; protein-N(5)-glutamine methyltransferase PrmB 2560643 12846375 Q7A_2504 Methylophaga nitratireducenticrescens protein-N(5)-glutamine methyltransferase PrmB YP_006296948.1 2559681 D 754476 CDS YP_006296949.1 387128344 12846376 complement(2560601..2561920) 1 NC_017857.1 PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2561920 12846376 Q7A_2505 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296949.1 2560601 R 754476 CDS YP_006296950.1 387128345 12846377 complement(2561967..2562659) 1 NC_017857.1 PFAM: DNA mismatch repair enzyme MutH; TIGRFAM: DNA mismatch repair endonuclease MutH; DNA mismatch repair endonuclease MutH 2562659 12846377 Q7A_2506 Methylophaga nitratireducenticrescens DNA mismatch repair endonuclease MutH YP_006296950.1 2561967 R 754476 CDS YP_006296951.1 387128346 12846378 2562708..2563631 1 NC_017857.1 PFAM: ABC transporter; ATP-binding component of ABC transport system 2563631 12846378 Q7A_2507 Methylophaga nitratireducenticrescens ATP-binding component of ABC transport system YP_006296951.1 2562708 D 754476 CDS YP_006296952.1 387128347 12846379 2563628..2564407 1 NC_017857.1 PFAM: ABC-2 type transporter; multidrug ABC transporter permease 2564407 12846379 Q7A_2508 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006296952.1 2563628 D 754476 CDS YP_006296953.1 387128348 12846380 complement(2564721..2565704) 1 NC_017857.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A; tRNA dihydrouridine synthase A 2565704 12846380 Q7A_2509 Methylophaga nitratireducenticrescens tRNA dihydrouridine synthase A YP_006296953.1 2564721 R 754476 CDS YP_006296954.1 387128349 12846381 2565878..2566480 1 NC_017857.1 PFAM: Protein of unknown function DUF45; metal-dependent hydrolase 2566480 12846381 Q7A_2510 Methylophaga nitratireducenticrescens metal-dependent hydrolase YP_006296954.1 2565878 D 754476 CDS YP_006296955.1 387128350 12846382 2566701..2567864 1 NC_017857.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 2567864 12846382 Q7A_2511 Methylophaga nitratireducenticrescens S-adenosylmethionine synthetase YP_006296955.1 2566701 D 754476 CDS YP_006296956.1 387128351 12846383 2567879..2569189 1 NC_017857.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase 2569189 12846383 Q7A_2512 Methylophaga nitratireducenticrescens adenosylhomocysteinase YP_006296956.1 2567879 D 754476 CDS YP_006296957.1 387128352 12846467 2569248..2570099 1 NC_017857.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 2570099 12846467 Q7A_2513 Methylophaga nitratireducenticrescens 5,10-methylenetetrahydrofolate reductase YP_006296957.1 2569248 D 754476 CDS YP_006296958.1 387128353 12846468 2570104..2570811 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; tungstate ABC transporter permease 2570811 12846468 Q7A_2514 Methylophaga nitratireducenticrescens tungstate ABC transporter permease YP_006296958.1 2570104 D 754476 CDS YP_006296959.1 387128354 12846469 2570808..2571797 1 NC_017857.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; ABC-type tungstate transport system, ATP-binding protein 2571797 12846469 Q7A_2515 Methylophaga nitratireducenticrescens ABC-type tungstate transport system, ATP-binding protein YP_006296959.1 2570808 D 754476 CDS YP_006296960.1 387128355 12846470 2571926..2573338 1 NC_017857.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor RpoN 2573338 12846470 Q7A_2516 Methylophaga nitratireducenticrescens RNA polymerase sigma-54 factor RpoN YP_006296960.1 2571926 D 754476 CDS YP_006296961.1 387128356 12846471 2573374..2573700 1 NC_017857.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosome hibernation protein YhbH 2573700 12846471 Q7A_2517 Methylophaga nitratireducenticrescens ribosome hibernation protein YhbH YP_006296961.1 2573374 D 754476 CDS YP_006296962.1 387128357 12846472 2573716..2574177 1 NC_017857.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 2574177 12846472 Q7A_2518 Methylophaga nitratireducenticrescens PTS IIA-like nitrogen-regulatory protein PtsN YP_006296962.1 2573716 D 754476 CDS YP_006296963.1 387128358 12846473 2574184..2574696 1 NC_017857.1 PFAM: HPr Serine kinase C-terminal domain; HPr kinase/phosphorylase 2574696 12846473 Q7A_2519 Methylophaga nitratireducenticrescens HPr kinase/phosphorylase YP_006296963.1 2574184 D 754476 CDS YP_006296964.1 387128359 12846474 2574881..2575213 1 NC_017857.1 PFAM: PTS system fructose IIA component; PTS system fructose subfamily transporter subunit IIA 2575213 12846474 Q7A_2520 Methylophaga nitratireducenticrescens PTS system fructose subfamily transporter subunit IIA YP_006296964.1 2574881 D 754476 CDS YP_006296965.1 387128360 12846475 2575210..2575482 1 NC_017857.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphocarrier protein 2575482 12846475 Q7A_2521 Methylophaga nitratireducenticrescens phosphocarrier protein YP_006296965.1 2575210 D 754476 CDS YP_006296966.1 387128361 12846476 2575479..2577230 1 NC_017857.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system phosphoenolpyruvate-protein phosphotransferase 2577230 12846476 Q7A_2522 Methylophaga nitratireducenticrescens PTS system phosphoenolpyruvate-protein phosphotransferase YP_006296966.1 2575479 D 754476 CDS YP_006296967.1 387128362 12846477 2577369..2578253 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 2578253 12846477 Q7A_2523 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006296967.1 2577369 D 754476 CDS YP_006296968.1 387128363 12846478 2578354..2579712 1 NC_017857.1 PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 2579712 12846478 Q7A_2524 Methylophaga nitratireducenticrescens magnesium transporter YP_006296968.1 2578354 D 754476 CDS YP_006296969.1 387128364 12846479 2579728..2580825 1 NC_017857.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 2580825 12846479 Q7A_2525 Methylophaga nitratireducenticrescens chorismate synthase YP_006296969.1 2579728 D 754476 CDS YP_006296970.1 387128365 12846480 2580837..2581994 1 NC_017857.1 PFAM: Major Facilitator Superfamily; Nucleoside:H+ symporter:Major facilitator superfamily 2581994 12846480 Q7A_2526 Methylophaga nitratireducenticrescens Nucleoside:H+ symporter:Major facilitator superfamily YP_006296970.1 2580837 D 754476 CDS YP_006296971.1 387128366 12846481 2582113..2583462 1 NC_017857.1 PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A 2583462 12846481 Q7A_2527 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit A YP_006296971.1 2582113 D 754476 CDS YP_006296972.1 387128367 12846482 2583465..2584673 1 NC_017857.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; Na(+)-translocating NADH-quinone reductase subunit B 2584673 12846482 Q7A_2528 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit B YP_006296972.1 2583465 D 754476 CDS YP_006296973.1 387128368 12846483 2584676..2585503 1 NC_017857.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; Na(+)-translocating NADH-quinone reductase subunit C 2585503 12846483 Q7A_2529 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit C YP_006296973.1 2584676 D 754476 CDS YP_006296974.1 387128369 12846484 2585503..2586165 1 NC_017857.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit D 2586165 12846484 Q7A_2530 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit D YP_006296974.1 2585503 D 754476 CDS YP_006296975.1 387128370 12846485 2586166..2586774 1 NC_017857.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; Na(+)-translocating NADH-quinone reductase subunit E 2586774 12846485 Q7A_2531 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit E YP_006296975.1 2586166 D 754476 CDS YP_006296976.1 387128371 12846486 2586774..2587991 1 NC_017857.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; Na(+)-translocating NADH-quinone reductase subunit F 2587991 12846486 Q7A_2532 Methylophaga nitratireducenticrescens Na(+)-translocating NADH-quinone reductase subunit F YP_006296976.1 2586774 D 754476 CDS YP_006296977.1 387128372 12846487 2587993..2588196 1 NC_017857.1 PFAM: Protein of unknown function (DUF539); hypothetical protein 2588196 12846487 Q7A_2533 Methylophaga nitratireducenticrescens hypothetical protein YP_006296977.1 2587993 D 754476 CDS YP_006296978.1 387128373 12846488 2588217..2588681 1 NC_017857.1 PFAM: CBS domain; transcriptional regulator 2588681 12846488 Q7A_2534 Methylophaga nitratireducenticrescens transcriptional regulator YP_006296978.1 2588217 D 754476 CDS YP_006296979.1 387128374 12846489 2588821..2589777 1 NC_017857.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 2589777 12846489 Q7A_2535 Methylophaga nitratireducenticrescens cysteine synthase YP_006296979.1 2588821 D 754476 CDS YP_006296980.1 387128375 12846490 2589842..2590765 1 NC_017857.1 PFAM: PAS fold; TIGRFAM: PAS domain S-box; sensory box histidine kinase 2590765 12846490 Q7A_2536 Methylophaga nitratireducenticrescens sensory box histidine kinase YP_006296980.1 2589842 D 754476 CDS YP_006296981.1 387128376 12846491 2590900..2591304 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2591304 12846491 Q7A_2537 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006296981.1 2590900 D 754476 CDS YP_006296982.1 387128377 12846492 complement(2591764..2591901) 1 NC_017857.1 hypothetical protein 2591901 12846492 Q7A_2538 Methylophaga nitratireducenticrescens hypothetical protein YP_006296982.1 2591764 R 754476 CDS YP_006296983.1 387128378 12846497 complement(2595864..2595986) 1 NC_017857.1 hypothetical protein 2595986 12846497 Q7A_2543 Methylophaga nitratireducenticrescens hypothetical protein YP_006296983.1 2595864 R 754476 CDS YP_006296984.1 387128379 12846500 complement(2598292..2599167) 1 NC_017857.1 AraC family transcriptional regulator 2599167 12846500 Q7A_2546 Methylophaga nitratireducenticrescens AraC family transcriptional regulator YP_006296984.1 2598292 R 754476 CDS YP_006296985.1 387128380 12846501 2599273..2599746 1 NC_017857.1 hypothetical protein 2599746 12846501 Q7A_2547 Methylophaga nitratireducenticrescens hypothetical protein YP_006296985.1 2599273 D 754476 CDS YP_006296986.1 387128381 12846502 complement(2599809..2601008) 1 NC_017857.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) 2601008 12846502 Q7A_2548 Methylophaga nitratireducenticrescens tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) YP_006296986.1 2599809 R 754476 CDS YP_006296987.1 387128382 12846503 2601131..2602723 1 NC_017857.1 PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23; peptidase 2602723 12846503 Q7A_2549 Methylophaga nitratireducenticrescens peptidase YP_006296987.1 2601131 D 754476 CDS YP_006296988.1 387128383 12846504 2602735..2603862 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0075); anhydro-N-acetylmuramic acid kinase 2603862 12846504 Q7A_2550 Methylophaga nitratireducenticrescens anhydro-N-acetylmuramic acid kinase YP_006296988.1 2602735 D 754476 CDS YP_006296989.1 387128384 12846505 complement(2603838..2604227) 1 NC_017857.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; glycine cleavage system H protein 2604227 12846505 Q7A_2551 Methylophaga nitratireducenticrescens glycine cleavage system H protein YP_006296989.1 2603838 R 754476 CDS YP_006296990.1 387128385 12846506 complement(2604220..2605677) 1 NC_017857.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 2605677 12846506 Q7A_2552 Methylophaga nitratireducenticrescens 4-alpha-glucanotransferase YP_006296990.1 2604220 R 754476 CDS YP_006296991.1 387128386 12846507 complement(2605681..2607363) 1 NC_017857.1 PFAM: Glycosyl hydrolase family 57; amylopullulanase 2607363 12846507 Q7A_2553 Methylophaga nitratireducenticrescens amylopullulanase YP_006296991.1 2605681 R 754476 CDS YP_006296992.1 387128387 12846508 complement(2607353..2608621) 1 NC_017857.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 2608621 12846508 Q7A_2554 Methylophaga nitratireducenticrescens glucose-1-phosphate adenylyltransferase YP_006296992.1 2607353 R 754476 CDS YP_006296993.1 387128388 12846509 2608890..2610899 1 NC_017857.1 PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; 1,4-alpha-glucan (glycogen) branching enzyme 2610899 12846509 Q7A_2555 Methylophaga nitratireducenticrescens 1,4-alpha-glucan (glycogen) branching enzyme YP_006296993.1 2608890 D 754476 CDS YP_006296994.1 387128389 12846510 complement(2610951..2612588) 1 NC_017857.1 PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 2612588 12846510 Q7A_2556 Methylophaga nitratireducenticrescens glucose-6-phosphate isomerase YP_006296994.1 2610951 R 754476 CDS YP_006296995.1 387128390 12846511 complement(2612613..2613881) 1 NC_017857.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 2613881 12846511 Q7A_2557 Methylophaga nitratireducenticrescens histidyl-tRNA synthetase YP_006296995.1 2612613 R 754476 CDS YP_006296996.1 387128391 12846512 complement(2613884..2614444) 1 NC_017857.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2614444 12846512 Q7A_2558 Methylophaga nitratireducenticrescens 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006296996.1 2613884 R 754476 CDS YP_006296997.1 387128392 12846513 complement(2614531..2615001) 1 NC_017857.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2615001 12846513 Q7A_2559 Methylophaga nitratireducenticrescens 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006296997.1 2614531 R 754476 CDS YP_006296998.1 387128393 12846514 complement(2615001..2615684) 1 NC_017857.1 hypothetical protein 2615684 12846514 Q7A_2560 Methylophaga nitratireducenticrescens hypothetical protein YP_006296998.1 2615001 R 754476 CDS YP_006296999.1 387128394 12846515 complement(2615807..2615926) 1 NC_017857.1 hypothetical protein 2615926 12846515 Q7A_2561 Methylophaga nitratireducenticrescens hypothetical protein YP_006296999.1 2615807 R 754476 CDS YP_006297000.1 387128395 12846516 complement(2615932..2616687) 1 NC_017857.1 PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW; type IV pilus biogenesis protein PilF 2616687 12846516 Q7A_2562 Methylophaga nitratireducenticrescens type IV pilus biogenesis protein PilF YP_006297000.1 2615932 R 754476 CDS YP_006297001.1 387128396 12846517 complement(2616684..2617790) 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; ribosomal RNA large subunit methyltransferase N 2617790 12846517 Q7A_2563 Methylophaga nitratireducenticrescens ribosomal RNA large subunit methyltransferase N YP_006297001.1 2616684 R 754476 CDS YP_006297002.1 387128397 12846518 complement(2617801..2618232) 1 NC_017857.1 PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 2618232 12846518 Q7A_2564 Methylophaga nitratireducenticrescens nucleoside diphosphate kinase YP_006297002.1 2617801 R 754476 CDS YP_006297003.1 387128398 12846519 complement(2618312..2618443) 1 NC_017857.1 hypothetical protein 2618443 12846519 Q7A_2565 Methylophaga nitratireducenticrescens hypothetical protein YP_006297003.1 2618312 R 754476 CDS YP_006297004.1 387128399 12846520 2618400..2619272 1 NC_017857.1 PFAM: ATP-NAD kinase; NAD kinase 2619272 12846520 Q7A_2566 Methylophaga nitratireducenticrescens NAD kinase YP_006297004.1 2618400 D 754476 CDS YP_006297005.1 387128400 12846521 2619266..2620939 1 NC_017857.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 2620939 12846521 Q7A_2567 Methylophaga nitratireducenticrescens DNA repair protein RecN YP_006297005.1 2619266 D 754476 CDS YP_006297006.1 387128401 12846522 complement(2620946..2621362) 1 NC_017857.1 PFAM: Ferric uptake regulator family; Ferric uptake regulation protein FUR 2621362 12846522 Q7A_2568 Methylophaga nitratireducenticrescens Ferric uptake regulation protein FUR YP_006297006.1 2620946 R 754476 CDS YP_006297007.1 387128402 12846523 2621440..2622018 1 NC_017857.1 PFAM: SmpA / OmlA family; outer membrane lipoprotein SmpA 2622018 12846523 Q7A_2569 Methylophaga nitratireducenticrescens outer membrane lipoprotein SmpA YP_006297007.1 2621440 D 754476 CDS YP_006297008.1 387128403 12846524 complement(2622037..2622663) 1 NC_017857.1 PFAM: Carbonic anhydrase; carbonic anhydrase 2622663 12846524 Q7A_2570 Methylophaga nitratireducenticrescens carbonic anhydrase YP_006297008.1 2622037 R 754476 CDS YP_006297009.1 387128404 12846525 complement(2622667..2623308) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; hydroxyacylglutathione hydrolase 2623308 12846525 Q7A_2571 Methylophaga nitratireducenticrescens hydroxyacylglutathione hydrolase YP_006297009.1 2622667 R 754476 CDS YP_006297010.1 387128405 12846526 complement(2623382..2624509) 1 NC_017857.1 hypothetical protein 2624509 12846526 Q7A_2572 Methylophaga nitratireducenticrescens hypothetical protein YP_006297010.1 2623382 R 754476 CDS YP_006297011.1 387128406 12846527 complement(2624714..2625130) 1 NC_017857.1 hypothetical protein 2625130 12846527 Q7A_2573 Methylophaga nitratireducenticrescens hypothetical protein YP_006297011.1 2624714 R 754476 CDS YP_006297012.1 387128407 12846528 complement(2625203..2627596) 1 NC_017857.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La Type II 2627596 12846528 Q7A_2574 Methylophaga nitratireducenticrescens ATP-dependent protease La Type II YP_006297012.1 2625203 R 754476 CDS YP_006297013.1 387128408 12846529 2627679..2627984 1 NC_017857.1 PFAM: PilZ domain; hypothetical protein 2627984 12846529 Q7A_2575 Methylophaga nitratireducenticrescens hypothetical protein YP_006297013.1 2627679 D 754476 CDS YP_006297014.1 387128409 12846530 complement(2627992..2628636) 1 NC_017857.1 PFAM: Ubiquinone biosynthesis protein COQ7; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2628636 12846530 Q7A_2576 Methylophaga nitratireducenticrescens 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_006297014.1 2627992 R 754476 CDS YP_006297015.1 387128410 12846531 complement(2628655..2629725) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2629725 12846531 Q7A_2577 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006297015.1 2628655 R 754476 CDS YP_006297016.1 387128411 12846532 complement(2629811..2630764) 1 NC_017857.1 PFAM: CheW-like domain; Response regulator receiver domain; chemotaxis protein CheV 2630764 12846532 Q7A_2578 Methylophaga nitratireducenticrescens chemotaxis protein CheV YP_006297016.1 2629811 R 754476 CDS YP_006297017.1 387128412 12846534 2631100..2633268 1 NC_017857.1 PFAM: Ribonuclease B OB domain; RNB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; 3'-to-5' exoribonuclease RNase R 2633268 12846534 Q7A_2580 Methylophaga nitratireducenticrescens 3'-to-5' exoribonuclease RNase R YP_006297017.1 2631100 D 754476 CDS YP_006297018.1 387128413 12846537 complement(2633903..2635483) 1 NC_017857.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box; Aerotaxis sensor receptor protein 2635483 12846537 Q7A_2583 Methylophaga nitratireducenticrescens Aerotaxis sensor receptor protein YP_006297018.1 2633903 R 754476 CDS YP_006297019.1 387128414 12846538 2635950..2637302 1 NC_017857.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; NADP-specific glutamate dehydrogenase 2637302 12846538 Q7A_2584 Methylophaga nitratireducenticrescens NADP-specific glutamate dehydrogenase YP_006297019.1 2635950 D 754476 CDS YP_006297020.1 387128415 12846539 complement(2637449..2637664) 1 NC_017857.1 ISSod6 transposase, IS1301 2637664 12846539 Q7A_2585 Methylophaga nitratireducenticrescens ISSod6 transposase, IS1301 YP_006297020.1 2637449 R 754476 CDS YP_006297021.1 387128416 12846540 complement(2637703..2637834) 1 NC_017857.1 hypothetical protein 2637834 12846540 Q7A_2586 Methylophaga nitratireducenticrescens hypothetical protein YP_006297021.1 2637703 R 754476 CDS YP_006297022.1 387128417 12846541 complement(2637861..2639612) 1 NC_017857.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; glucose dehydrogenase, PQQ-dependent 2639612 12846541 Q7A_2587 Methylophaga nitratireducenticrescens glucose dehydrogenase, PQQ-dependent YP_006297022.1 2637861 R 754476 CDS YP_006297023.1 387128418 12846542 complement(2639917..2640519) 1 NC_017857.1 PFAM: Isochorismatase family; isochorismatase 2640519 12846542 Q7A_2588 Methylophaga nitratireducenticrescens isochorismatase YP_006297023.1 2639917 R 754476 CDS YP_006297024.1 387128419 12846543 complement(2640935..2641933) 1 NC_017857.1 PFAM: Catalase; catalase 2641933 12846543 Q7A_2589 Methylophaga nitratireducenticrescens catalase YP_006297024.1 2640935 R 754476 CDS YP_006297025.1 387128420 12846544 2642022..2642729 1 NC_017857.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2642729 12846544 Q7A_2590 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297025.1 2642022 D 754476 CDS YP_006297026.1 387128421 12846545 2642753..2643742 1 NC_017857.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; quinone oxidoreductase 2643742 12846545 Q7A_2591 Methylophaga nitratireducenticrescens quinone oxidoreductase YP_006297026.1 2642753 D 754476 CDS YP_006297027.1 387128422 12846547 2643776..2645716 1 NC_017857.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; Glucose / Sorbosone dehydrogenase; L-sorbosone dehydrogenase 2645716 12846547 Q7A_2592 Methylophaga nitratireducenticrescens L-sorbosone dehydrogenase YP_006297027.1 2643776 D 754476 CDS YP_006297028.1 387128423 12846548 complement(2646260..2646388) 1 NC_017857.1 hypothetical protein 2646388 12846548 Q7A_2593 Methylophaga nitratireducenticrescens hypothetical protein YP_006297028.1 2646260 R 754476 CDS YP_006297029.1 387128424 12846632 complement(2646917..2647240) 1 NC_017857.1 hypothetical protein 2647240 12846632 Q7A_2594 Methylophaga nitratireducenticrescens hypothetical protein YP_006297029.1 2646917 R 754476 CDS YP_006297030.1 387128425 12846633 complement(2647298..2647531) 1 NC_017857.1 hypothetical protein 2647531 12846633 Q7A_2595 Methylophaga nitratireducenticrescens hypothetical protein YP_006297030.1 2647298 R 754476 CDS YP_006297031.1 387128426 12846634 complement(2647595..2647711) 1 NC_017857.1 hypothetical protein 2647711 12846634 Q7A_2596 Methylophaga nitratireducenticrescens hypothetical protein YP_006297031.1 2647595 R 754476 CDS YP_006297032.1 387128427 12846635 complement(2647712..2647849) 1 NC_017857.1 hypothetical protein 2647849 12846635 Q7A_2597 Methylophaga nitratireducenticrescens hypothetical protein YP_006297032.1 2647712 R 754476 CDS YP_006297033.1 387128428 12846636 complement(2647997..2648266) 1 NC_017857.1 hypothetical protein 2648266 12846636 Q7A_2598 Methylophaga nitratireducenticrescens hypothetical protein YP_006297033.1 2647997 R 754476 CDS YP_006297034.1 387128429 12846637 complement(2648601..2648729) 1 NC_017857.1 hypothetical protein 2648729 12846637 Q7A_2599 Methylophaga nitratireducenticrescens hypothetical protein YP_006297034.1 2648601 R 754476 CDS YP_006297035.1 387128430 12846638 complement(2649258..2649470) 1 NC_017857.1 hypothetical protein 2649470 12846638 Q7A_2600 Methylophaga nitratireducenticrescens hypothetical protein YP_006297035.1 2649258 R 754476 CDS YP_006297036.1 387128431 12846639 complement(2649564..2649860) 1 NC_017857.1 hypothetical protein 2649860 12846639 Q7A_2601 Methylophaga nitratireducenticrescens hypothetical protein YP_006297036.1 2649564 R 754476 CDS YP_006297037.1 387128432 12846640 complement(2649981..2650289) 1 NC_017857.1 hypothetical protein 2650289 12846640 Q7A_2602 Methylophaga nitratireducenticrescens hypothetical protein YP_006297037.1 2649981 R 754476 CDS YP_006297038.1 387128433 12846641 complement(2650373..2650909) 1 NC_017857.1 hypothetical protein 2650909 12846641 Q7A_2603 Methylophaga nitratireducenticrescens hypothetical protein YP_006297038.1 2650373 R 754476 CDS YP_006297039.1 387128434 12846642 2651002..2651493 1 NC_017857.1 hypothetical protein 2651493 12846642 Q7A_2604 Methylophaga nitratireducenticrescens hypothetical protein YP_006297039.1 2651002 D 754476 CDS YP_006297040.1 387128435 12846643 complement(2651546..2651683) 1 NC_017857.1 hypothetical protein 2651683 12846643 Q7A_2605 Methylophaga nitratireducenticrescens hypothetical protein YP_006297040.1 2651546 R 754476 CDS YP_006297041.1 387128436 12846644 complement(2651798..2651977) 1 NC_017857.1 hypothetical protein 2651977 12846644 Q7A_2606 Methylophaga nitratireducenticrescens hypothetical protein YP_006297041.1 2651798 R 754476 CDS YP_006297042.1 387128437 12846645 complement(2652041..2652217) 1 NC_017857.1 hypothetical protein 2652217 12846645 Q7A_2607 Methylophaga nitratireducenticrescens hypothetical protein YP_006297042.1 2652041 R 754476 CDS YP_006297043.1 387128438 12846646 2652226..2652348 1 NC_017857.1 hypothetical protein 2652348 12846646 Q7A_2608 Methylophaga nitratireducenticrescens hypothetical protein YP_006297043.1 2652226 D 754476 CDS YP_006297044.1 387128439 12846647 complement(2652718..2653269) 1 NC_017857.1 PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST 2653269 12846647 Q7A_2609 Methylophaga nitratireducenticrescens CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST YP_006297044.1 2652718 R 754476 CDS YP_006297045.1 387128440 12846648 complement(2653281..2653931) 1 NC_017857.1 hypothetical protein 2653931 12846648 Q7A_2610 Methylophaga nitratireducenticrescens hypothetical protein YP_006297045.1 2653281 R 754476 CDS YP_006297046.1 387128441 12846649 complement(2654317..2655261) 1 NC_017857.1 hypothetical protein 2655261 12846649 Q7A_2611 Methylophaga nitratireducenticrescens hypothetical protein YP_006297046.1 2654317 R 754476 CDS YP_006297047.1 387128442 12846650 complement(2655286..2658261) 1 NC_017857.1 PFAM: Type III restriction enzyme, res subunit; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated endonuclease Cas3-HD 2658261 12846650 Q7A_2612 Methylophaga nitratireducenticrescens CRISPR-associated endonuclease Cas3-HD YP_006297047.1 2655286 R 754476 CDS YP_006297048.1 387128443 12846651 complement(2658258..2659217) 1 NC_017857.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein Cas1 2659217 12846651 Q7A_2613 Methylophaga nitratireducenticrescens CRISPR-associated protein Cas1 YP_006297048.1 2658258 R 754476 CDS YP_006297049.1 387128444 12846652 complement(2659283..2660245) 1 NC_017857.1 transcriptional regulator 2660245 12846652 Q7A_2614 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297049.1 2659283 R 754476 CDS YP_006297050.1 387128445 12846653 complement(2660351..2662063) 1 NC_017857.1 PFAM: Protein kinase domain; Protein phosphatase 2C; Serine/threonine protein kinase 2662063 12846653 Q7A_2615 Methylophaga nitratireducenticrescens Serine/threonine protein kinase YP_006297050.1 2660351 R 754476 CDS YP_006297051.1 387128446 12846654 complement(2662078..2663478) 1 NC_017857.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); nitrate/nitrite transporter 2663478 12846654 Q7A_2616 Methylophaga nitratireducenticrescens nitrate/nitrite transporter YP_006297051.1 2662078 R 754476 CDS YP_006297052.1 387128447 12846655 2663702..2663863 1 NC_017857.1 hypothetical protein 2663863 12846655 Q7A_2617 Methylophaga nitratireducenticrescens hypothetical protein YP_006297052.1 2663702 D 754476 CDS YP_006297053.1 387128448 12846656 complement(2663996..2665228) 1 NC_017857.1 PFAM: EAL domain; EAL-domain associated signalling protein domain; hypothetical protein 2665228 12846656 Q7A_2618 Methylophaga nitratireducenticrescens hypothetical protein YP_006297053.1 2663996 R 754476 CDS YP_006297054.1 387128449 12846657 complement(2665624..2668275) 1 NC_017857.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Assimilatory nitrate reductase large subunit 2668275 12846657 Q7A_2619 Methylophaga nitratireducenticrescens Assimilatory nitrate reductase large subunit YP_006297054.1 2665624 R 754476 CDS YP_006297055.1 387128450 12846658 complement(2668286..2668594) 1 NC_017857.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit 2668594 12846658 Q7A_2620 Methylophaga nitratireducenticrescens nitrite reductase (NAD(P)H) small subunit YP_006297055.1 2668286 R 754476 CDS YP_006297056.1 387128451 12846659 complement(2668600..2671029) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit 2671029 12846659 Q7A_2621 Methylophaga nitratireducenticrescens nitrite reductase (NAD(P)H) large subunit YP_006297056.1 2668600 R 754476 CDS YP_006297057.1 387128452 12846660 complement(2671228..2672667) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2672667 12846660 Q7A_2622 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006297057.1 2671228 R 754476 CDS YP_006297058.1 387128453 12846661 complement(2672777..2674870) 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2674870 12846661 Q7A_2623 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006297058.1 2672777 R 754476 CDS YP_006297059.1 387128454 12846662 complement(2675015..2675467) 1 NC_017857.1 PFAM: Nuclear transport factor 2 (NTF2) domain; TIGRFAM: conserved hypothetical protein; Ketosteroid isomerase-like protein 2675467 12846662 Q7A_2624 Methylophaga nitratireducenticrescens Ketosteroid isomerase-like protein YP_006297059.1 2675015 R 754476 CDS YP_006297060.1 387128455 12846663 complement(2675491..2676015) 1 NC_017857.1 PFAM: MarR family; marR family transcriptional regulator 2676015 12846663 Q7A_2625 Methylophaga nitratireducenticrescens marR family transcriptional regulator YP_006297060.1 2675491 R 754476 CDS YP_006297061.1 387128456 12846664 2676210..2678054 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2678054 12846664 Q7A_2626 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006297061.1 2676210 D 754476 CDS YP_006297062.1 387128457 12846665 2678094..2679503 1 NC_017857.1 PFAM: YcjX-like family, DUF463; hypothetical protein 2679503 12846665 Q7A_2627 Methylophaga nitratireducenticrescens hypothetical protein YP_006297062.1 2678094 D 754476 CDS YP_006297063.1 387128458 12846666 2679503..2680558 1 NC_017857.1 PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein; hypothetical protein 2680558 12846666 Q7A_2628 Methylophaga nitratireducenticrescens hypothetical protein YP_006297063.1 2679503 D 754476 CDS YP_006297064.1 387128459 12846667 complement(2680564..2683383) 1 NC_017857.1 PFAM: GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; hypothetical protein 2683383 12846667 Q7A_2629 Methylophaga nitratireducenticrescens hypothetical protein YP_006297064.1 2680564 R 754476 CDS YP_006297065.1 387128460 12846668 2683610..2683987 1 NC_017857.1 hypothetical protein 2683987 12846668 Q7A_2630 Methylophaga nitratireducenticrescens hypothetical protein YP_006297065.1 2683610 D 754476 CDS YP_006297066.1 387128461 12846669 2684002..2684997 1 NC_017857.1 PFAM: Peptidase C39 family; bacteriocin/lantibiotic ABC transporter 2684997 12846669 Q7A_2631 Methylophaga nitratireducenticrescens bacteriocin/lantibiotic ABC transporter YP_006297066.1 2684002 D 754476 CDS YP_006297067.1 387128462 12846670 2685199..2685969 1 NC_017857.1 PFAM: EAL domain; hypothetical protein 2685969 12846670 Q7A_2632 Methylophaga nitratireducenticrescens hypothetical protein YP_006297067.1 2685199 D 754476 CDS YP_006297068.1 387128463 12846671 complement(2686024..2686473) 1 NC_017857.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin; Azurin 2686473 12846671 Q7A_2633 Methylophaga nitratireducenticrescens Azurin YP_006297068.1 2686024 R 754476 CDS YP_006297069.1 387128464 12846672 complement(2686851..2687840) 1 NC_017857.1 hypothetical protein 2687840 12846672 Q7A_2634 Methylophaga nitratireducenticrescens hypothetical protein YP_006297069.1 2686851 R 754476 CDS YP_006297070.1 387128465 12846673 complement(2687910..2688071) 1 NC_017857.1 hypothetical protein 2688071 12846673 Q7A_2635 Methylophaga nitratireducenticrescens hypothetical protein YP_006297070.1 2687910 R 754476 CDS YP_006297071.1 387128466 12846674 complement(2688071..2688697) 1 NC_017857.1 hypothetical protein 2688697 12846674 Q7A_2636 Methylophaga nitratireducenticrescens hypothetical protein YP_006297071.1 2688071 R 754476 CDS YP_006297072.1 387128467 12846675 complement(2688808..2689005) 1 NC_017857.1 transposase, IS982 family 2689005 12846675 Q7A_2637 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006297072.1 2688808 R 754476 CDS YP_006297073.1 387128468 12846678 complement(2689633..2690190) 1 NC_017857.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2690190 12846678 Q7A_2640 Methylophaga nitratireducenticrescens CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006297073.1 2689633 R 754476 CDS YP_006297074.1 387128469 12846679 complement(2690244..2692085) 1 NC_017857.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C 2692085 12846679 Q7A_2641 Methylophaga nitratireducenticrescens excinuclease ABC subunit C YP_006297074.1 2690244 R 754476 CDS YP_006297075.1 387128470 12846680 complement(2692098..2692307) 1 NC_017857.1 hypothetical protein 2692307 12846680 Q7A_2642 Methylophaga nitratireducenticrescens hypothetical protein YP_006297075.1 2692098 R 754476 CDS YP_006297076.1 387128471 12846681 2692388..2695918 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 2695918 12846681 Q7A_2643 Methylophaga nitratireducenticrescens transcription-repair coupling factor YP_006297076.1 2692388 D 754476 CDS YP_006297077.1 387128472 12846682 2695918..2696685 1 NC_017857.1 PFAM: Methyltransferase domain; S-adenosylmethionine-dependent methyltransferase 2696685 12846682 Q7A_2644 Methylophaga nitratireducenticrescens S-adenosylmethionine-dependent methyltransferase YP_006297077.1 2695918 D 754476 CDS YP_006297078.1 387128473 12846683 2696775..2697644 1 NC_017857.1 PFAM: Protein of unknown function (DUF785); hypothetical protein 2697644 12846683 Q7A_2645 Methylophaga nitratireducenticrescens hypothetical protein YP_006297078.1 2696775 D 754476 CDS YP_006297079.1 387128474 12846684 2697654..2699165 1 NC_017857.1 hypothetical protein 2699165 12846684 Q7A_2646 Methylophaga nitratireducenticrescens hypothetical protein YP_006297079.1 2697654 D 754476 CDS YP_006297080.1 387128475 12846685 2699162..2700163 1 NC_017857.1 TIGRFAM: alpha-L-glutamate ligase-related protein; alpha-L-glutamate ligase 2700163 12846685 Q7A_2647 Methylophaga nitratireducenticrescens alpha-L-glutamate ligase YP_006297080.1 2699162 D 754476 CDS YP_006297081.1 387128476 12846687 2700183..2700902 1 NC_017857.1 PFAM: Protein of unknown function (DUF541); hypothetical protein 2700902 12846687 Q7A_2648 Methylophaga nitratireducenticrescens hypothetical protein YP_006297081.1 2700183 D 754476 CDS YP_006297082.1 387128477 12846689 2700902..2701960 1 NC_017857.1 PFAM: Radical SAM superfamily; hypothetical protein 2701960 12846689 Q7A_2649 Methylophaga nitratireducenticrescens hypothetical protein YP_006297082.1 2700902 D 754476 CDS YP_006297083.1 387128478 12846690 complement(2701984..2703000) 1 NC_017857.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; Myo-inositol 2-dehydrogenase 2703000 12846690 Q7A_2650 Methylophaga nitratireducenticrescens Myo-inositol 2-dehydrogenase YP_006297083.1 2701984 R 754476 CDS YP_006297084.1 387128479 12846691 2703149..2703661 1 NC_017857.1 PFAM: Redoxin; peroxiredoxin 2703661 12846691 Q7A_2651 Methylophaga nitratireducenticrescens peroxiredoxin YP_006297084.1 2703149 D 754476 CDS YP_006297085.1 387128480 12846692 complement(2703716..2704417) 1 NC_017857.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 2704417 12846692 Q7A_2652 Methylophaga nitratireducenticrescens ribose 5-phosphate isomerase A YP_006297085.1 2703716 R 754476 CDS YP_006297086.1 387128481 12846693 2704503..2705390 1 NC_017857.1 PFAM: Fructosamine kinase; ribulosamine/erythrulosamine 3-kinase 2705390 12846693 Q7A_2653 Methylophaga nitratireducenticrescens ribulosamine/erythrulosamine 3-kinase YP_006297086.1 2704503 D 754476 CDS YP_006297087.1 387128482 12846694 2705397..2705882 1 NC_017857.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; Low molecular weight protein tyrosine phosphatase 2705882 12846694 Q7A_2654 Methylophaga nitratireducenticrescens Low molecular weight protein tyrosine phosphatase YP_006297087.1 2705397 D 754476 CDS YP_006297088.1 387128483 12846695 2706015..2707487 1 NC_017857.1 PFAM: Citrate transporter; Na+/H+ antiporter NhaD type 2707487 12846695 Q7A_2655 Methylophaga nitratireducenticrescens Na+/H+ antiporter NhaD type YP_006297088.1 2706015 D 754476 CDS YP_006297089.1 387128484 12846696 2707563..2708630 1 NC_017857.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 2708630 12846696 Q7A_2656 Methylophaga nitratireducenticrescens 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha YP_006297089.1 2707563 D 754476 CDS YP_006297090.1 387128485 12846697 2708880..2709461 1 NC_017857.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; electron transport complex protein RnfA 2709461 12846697 Q7A_2657 Methylophaga nitratireducenticrescens electron transport complex protein RnfA YP_006297090.1 2708880 D 754476 CDS YP_006297091.1 387128486 12846698 2709465..2710025 1 NC_017857.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; electron transport complex protein RnfB 2710025 12846698 Q7A_2658 Methylophaga nitratireducenticrescens electron transport complex protein RnfB YP_006297091.1 2709465 D 754476 CDS YP_006297092.1 387128487 12846699 2710022..2711548 1 NC_017857.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; electron transport complex protein RnfC 2711548 12846699 Q7A_2659 Methylophaga nitratireducenticrescens electron transport complex protein RnfC YP_006297092.1 2710022 D 754476 CDS YP_006297093.1 387128488 12846700 2711548..2712579 1 NC_017857.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; electron transport complex protein RnfD 2712579 12846700 Q7A_2660 Methylophaga nitratireducenticrescens electron transport complex protein RnfD YP_006297093.1 2711548 D 754476 CDS YP_006297094.1 387128489 12846701 2712576..2713214 1 NC_017857.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; electron transport complex protein RnfG 2713214 12846701 Q7A_2661 Methylophaga nitratireducenticrescens electron transport complex protein RnfG YP_006297094.1 2712576 D 754476 CDS YP_006297095.1 387128490 12846702 2713211..2713900 1 NC_017857.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; electron transport complex protein RnfE 2713900 12846702 Q7A_2662 Methylophaga nitratireducenticrescens electron transport complex protein RnfE YP_006297095.1 2713211 D 754476 CDS YP_006297096.1 387128491 12846703 2713903..2714553 1 NC_017857.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease III 2714553 12846703 Q7A_2663 Methylophaga nitratireducenticrescens endonuclease III YP_006297096.1 2713903 D 754476 CDS YP_006297097.1 387128492 12846704 2714553..2714987 1 NC_017857.1 PFAM: Domain of unknown function (DUF1841); hypothetical protein 2714987 12846704 Q7A_2664 Methylophaga nitratireducenticrescens hypothetical protein YP_006297097.1 2714553 D 754476 CDS YP_006297098.1 387128493 12846705 2714990..2715994 1 NC_017857.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; arginate lyase-like protein 2715994 12846705 Q7A_2665 Methylophaga nitratireducenticrescens arginate lyase-like protein YP_006297098.1 2714990 D 754476 CDS YP_006297099.1 387128494 12846706 2716053..2716547 1 NC_017857.1 cytochrome c family protein 2716547 12846706 Q7A_2666 Methylophaga nitratireducenticrescens cytochrome c family protein YP_006297099.1 2716053 D 754476 CDS YP_006297100.1 387128495 12846707 2716694..2719513 1 NC_017857.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter; Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B 2719513 12846707 Q7A_2667 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit A, Na(+) H(+) antiporter subunit B YP_006297100.1 2716694 D 754476 CDS YP_006297101.1 387128496 12846708 2719513..2719905 1 NC_017857.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; Na(+) H(+) antiporter subunit C 2719905 12846708 Q7A_2668 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit C YP_006297101.1 2719513 D 754476 CDS YP_006297102.1 387128497 12846709 2719902..2721428 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Na(+) H(+) antiporter subunit D 2721428 12846709 Q7A_2669 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit D YP_006297102.1 2719902 D 754476 CDS YP_006297103.1 387128498 12846710 2721425..2721922 1 NC_017857.1 PFAM: Na+/H+ ion antiporter subunit; Na(+) H(+) antiporter subunit E 2721922 12846710 Q7A_2670 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit E YP_006297103.1 2721425 D 754476 CDS YP_006297104.1 387128499 12846711 2721916..2722185 1 NC_017857.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); Na(+) H(+) antiporter subunit F 2722185 12846711 Q7A_2671 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit F YP_006297104.1 2721916 D 754476 CDS YP_006297105.1 387128500 12846712 2722194..2722511 1 NC_017857.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; Na(+) H(+) antiporter subunit G 2722511 12846712 Q7A_2672 Methylophaga nitratireducenticrescens Na(+) H(+) antiporter subunit G YP_006297105.1 2722194 D 754476 CDS YP_006297106.1 387128501 12846713 2722513..2722986 1 NC_017857.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 2722986 12846713 Q7A_2673 Methylophaga nitratireducenticrescens hypothetical protein YP_006297106.1 2722513 D 754476 CDS YP_006297107.1 387128502 12845074 complement(2723070..2724392) 1 NC_017857.1 hypothetical protein 2724392 12845074 Q7A_2674 Methylophaga nitratireducenticrescens hypothetical protein YP_006297107.1 2723070 R 754476 CDS YP_006297108.1 387128503 12845075 complement(2724529..2724642) 1 NC_017857.1 hypothetical protein 2724642 12845075 Q7A_2675 Methylophaga nitratireducenticrescens hypothetical protein YP_006297108.1 2724529 R 754476 CDS YP_006297109.1 387128504 12845076 2725042..2725161 1 NC_017857.1 hypothetical protein 2725161 12845076 Q7A_2676 Methylophaga nitratireducenticrescens hypothetical protein YP_006297109.1 2725042 D 754476 CDS YP_006297110.1 387128505 12845077 2725419..2726702 1 NC_017857.1 PFAM: Major Facilitator Superfamily; transmembrane transport protein-permease 2726702 12845077 Q7A_2677 Methylophaga nitratireducenticrescens transmembrane transport protein-permease YP_006297110.1 2725419 D 754476 CDS YP_006297111.1 387128506 12845078 2726807..2727070 1 NC_017857.1 PFAM: Transposase; transposase 2727070 12845078 Q7A_2678 Methylophaga nitratireducenticrescens transposase YP_006297111.1 2726807 D 754476 CDS YP_006297112.1 387128507 12845079 2727199..2727882 1 NC_017857.1 PFAM: Integrase core domain; ISDet2, transposase orfB 2727882 12845079 Q7A_2679 Methylophaga nitratireducenticrescens ISDet2, transposase orfB YP_006297112.1 2727199 D 754476 CDS YP_006297113.1 387128508 12845080 complement(2728006..2728188) 1 NC_017857.1 hypothetical protein 2728188 12845080 Q7A_2680 Methylophaga nitratireducenticrescens hypothetical protein YP_006297113.1 2728006 R 754476 CDS YP_006297114.1 387128509 12845081 complement(2728552..2729400) 1 NC_017857.1 hypothetical protein 2729400 12845081 Q7A_2681 Methylophaga nitratireducenticrescens hypothetical protein YP_006297114.1 2728552 R 754476 CDS YP_006297115.1 387128510 12845082 complement(2729621..2730454) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3307); hypothetical protein 2730454 12845082 Q7A_2682 Methylophaga nitratireducenticrescens hypothetical protein YP_006297115.1 2729621 R 754476 CDS YP_006297116.1 387128511 12845083 complement(2730447..2731085) 1 NC_017857.1 hypothetical protein 2731085 12845083 Q7A_2683 Methylophaga nitratireducenticrescens hypothetical protein YP_006297116.1 2730447 R 754476 CDS YP_006297117.1 387128512 12845084 complement(2731547..2731738) 1 NC_017857.1 hypothetical protein 2731738 12845084 Q7A_2684 Methylophaga nitratireducenticrescens hypothetical protein YP_006297117.1 2731547 R 754476 CDS YP_006297118.1 387128513 12845085 complement(2731819..2732169) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 2732169 12845085 Q7A_2685 Methylophaga nitratireducenticrescens hypothetical protein YP_006297118.1 2731819 R 754476 CDS YP_006297119.1 387128514 12845086 complement(2732260..2732808) 1 NC_017857.1 hypothetical protein 2732808 12845086 Q7A_2686 Methylophaga nitratireducenticrescens hypothetical protein YP_006297119.1 2732260 R 754476 CDS YP_006297120.1 387128515 12845087 complement(2732941..2733273) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 2733273 12845087 Q7A_2687 Methylophaga nitratireducenticrescens hypothetical protein YP_006297120.1 2732941 R 754476 CDS YP_006297121.1 387128516 12845088 complement(2734605..2735411) 1 NC_017857.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2735411 12845088 Q7A_2688 Methylophaga nitratireducenticrescens transposase YP_006297121.1 2734605 R 754476 CDS YP_006297122.1 387128517 12845089 complement(2735829..2737190) 1 NC_017857.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; metallo-beta-lactamase-like protein 2737190 12845089 Q7A_2689 Methylophaga nitratireducenticrescens metallo-beta-lactamase-like protein YP_006297122.1 2735829 R 754476 CDS YP_006297123.1 387128518 12845090 complement(2737590..2738063) 1 NC_017857.1 hypothetical protein 2738063 12845090 Q7A_2690 Methylophaga nitratireducenticrescens hypothetical protein YP_006297123.1 2737590 R 754476 CDS YP_006297124.1 387128519 12845091 2738279..2738404 1 NC_017857.1 hypothetical protein 2738404 12845091 Q7A_2691 Methylophaga nitratireducenticrescens hypothetical protein YP_006297124.1 2738279 D 754476 CDS YP_006297125.1 387128520 12845092 2738713..2738931 1 NC_017857.1 hypothetical protein 2738931 12845092 Q7A_2692 Methylophaga nitratireducenticrescens hypothetical protein YP_006297125.1 2738713 D 754476 CDS YP_006297126.1 387128521 12845093 complement(2739013..2739864) 1 NC_017857.1 PFAM: Domain of unkown function (DUF1775); Nuclear export factor GLE1 2739864 12845093 Q7A_2693 Methylophaga nitratireducenticrescens Nuclear export factor GLE1 YP_006297126.1 2739013 R 754476 CDS YP_006297127.1 387128522 12845094 complement(2739908..2741920) 1 NC_017857.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep 2741920 12845094 Q7A_2694 Methylophaga nitratireducenticrescens ATP-dependent DNA helicase Rep YP_006297127.1 2739908 R 754476 CDS YP_006297128.1 387128523 12845095 complement(2741927..2743429) 1 NC_017857.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; ComM-like protein 2743429 12845095 Q7A_2695 Methylophaga nitratireducenticrescens ComM-like protein YP_006297128.1 2741927 R 754476 CDS YP_006297129.1 387128524 12845096 complement(2743507..2743626) 1 NC_017857.1 hypothetical protein 2743626 12845096 Q7A_2696 Methylophaga nitratireducenticrescens hypothetical protein YP_006297129.1 2743507 R 754476 CDS YP_006297130.1 387128525 12845097 complement(2743811..2744077) 1 NC_017857.1 hypothetical protein 2744077 12845097 Q7A_2697 Methylophaga nitratireducenticrescens hypothetical protein YP_006297130.1 2743811 R 754476 CDS YP_006297131.1 387128526 12845098 2744198..2745073 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2745073 12845098 Q7A_2698 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297131.1 2744198 D 754476 CDS YP_006297132.1 387128527 12845099 complement(2745076..2746776) 1 NC_017857.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein I (serine chemoreceptor protein) 2746776 12845099 Q7A_2699 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein I (serine chemoreceptor protein) YP_006297132.1 2745076 R 754476 CDS YP_006297133.1 387128528 12845100 2746953..2747132 1 NC_017857.1 hypothetical protein 2747132 12845100 Q7A_2700 Methylophaga nitratireducenticrescens hypothetical protein YP_006297133.1 2746953 D 754476 CDS YP_006297134.1 387128529 12845101 2747153..2747467 1 NC_017857.1 PFAM: Protein of unknown function, DUF481; hypothetical protein 2747467 12845101 Q7A_2701 Methylophaga nitratireducenticrescens hypothetical protein YP_006297134.1 2747153 D 754476 CDS YP_006297135.1 387128530 12845102 complement(2747452..2748348) 1 NC_017857.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR-family transcriptional regulator PtxE 2748348 12845102 Q7A_2702 Methylophaga nitratireducenticrescens LysR-family transcriptional regulator PtxE YP_006297135.1 2747452 R 754476 CDS YP_006297136.1 387128531 12845103 complement(2748336..2749352) 1 NC_017857.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase /hydroxypyruvate reductase 2749352 12845103 Q7A_2703 Methylophaga nitratireducenticrescens glyoxylate reductase /hydroxypyruvate reductase YP_006297136.1 2748336 R 754476 CDS YP_006297137.1 387128532 12845104 complement(2749362..2750168) 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE; phosphonate ABC transporter permease protein phnE 2750168 12845104 Q7A_2704 Methylophaga nitratireducenticrescens phosphonate ABC transporter permease protein phnE YP_006297137.1 2749362 R 754476 CDS YP_006297138.1 387128533 12845106 complement(2751040..2751939) 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein; phosphonate ABC transporter ATP-binding protein 2751939 12845106 Q7A_2707 Methylophaga nitratireducenticrescens phosphonate ABC transporter ATP-binding protein YP_006297138.1 2751040 R 754476 CDS YP_006297139.1 387128534 12845107 complement(2752090..2752404) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1255); hypothetical protein 2752404 12845107 Q7A_2708 Methylophaga nitratireducenticrescens hypothetical protein YP_006297139.1 2752090 R 754476 CDS YP_006297140.1 387128535 12845108 complement(2752465..2752713) 1 NC_017857.1 PFAM: Protein of unknown function (DUF526); hypothetical protein 2752713 12845108 Q7A_2709 Methylophaga nitratireducenticrescens hypothetical protein YP_006297140.1 2752465 R 754476 CDS YP_006297141.1 387128536 12845109 2753102..2753713 1 NC_017857.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; inaA protein 2753713 12845109 Q7A_2710 Methylophaga nitratireducenticrescens inaA protein YP_006297141.1 2753102 D 754476 CDS YP_006297142.1 387128537 12845110 complement(2753753..2755213) 1 NC_017857.1 PFAM: Bacterial protein of unknown function (DUF853); ATPase 2755213 12845110 Q7A_2711 Methylophaga nitratireducenticrescens ATPase YP_006297142.1 2753753 R 754476 CDS YP_006297143.1 387128538 12845111 2755425..2755862 1 NC_017857.1 PFAM: Protein of unknown function (DUF1043); hypothetical protein 2755862 12845111 Q7A_2712 Methylophaga nitratireducenticrescens hypothetical protein YP_006297143.1 2755425 D 754476 CDS YP_006297144.1 387128539 12845112 complement(2755859..2757613) 1 NC_017857.1 PFAM: Uncharacterized conserved protein (DUF2075); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 2757613 12845112 Q7A_2713 Methylophaga nitratireducenticrescens exodeoxyribonuclease V subunit alpha YP_006297144.1 2755859 R 754476 CDS YP_006297145.1 387128540 12845113 complement(2757610..2761086) 1 NC_017857.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 2761086 12845113 Q7A_2714 Methylophaga nitratireducenticrescens exodeoxyribonuclease V subunit beta YP_006297145.1 2757610 R 754476 CDS YP_006297146.1 387128541 12845114 complement(2761083..2764286) 1 NC_017857.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 2764286 12845114 Q7A_2715 Methylophaga nitratireducenticrescens exodeoxyribonuclease V subunit gamma YP_006297146.1 2761083 R 754476 CDS YP_006297147.1 387128542 12845115 complement(2764385..2764501) 1 NC_017857.1 hypothetical protein 2764501 12845115 Q7A_2716 Methylophaga nitratireducenticrescens hypothetical protein YP_006297147.1 2764385 R 754476 CDS YP_006297148.1 387128543 12845116 2764684..2764974 1 NC_017857.1 hypothetical protein 2764974 12845116 Q7A_2717 Methylophaga nitratireducenticrescens hypothetical protein YP_006297148.1 2764684 D 754476 CDS YP_006297149.1 387128544 12845117 2765110..2765622 1 NC_017857.1 PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 2765622 12845117 Q7A_2718 Methylophaga nitratireducenticrescens pyridoxamine 5'-phosphate oxidase YP_006297149.1 2765110 D 754476 CDS YP_006297150.1 387128545 12845118 2765609..2766538 1 NC_017857.1 PFAM: Radical SAM superfamily; radical SAM family protein 2766538 12845118 Q7A_2719 Methylophaga nitratireducenticrescens radical SAM family protein YP_006297150.1 2765609 D 754476 CDS YP_006297151.1 387128546 12845119 2766610..2766807 1 NC_017857.1 hypothetical protein 2766807 12845119 Q7A_2720 Methylophaga nitratireducenticrescens hypothetical protein YP_006297151.1 2766610 D 754476 CDS YP_006297152.1 387128547 12845120 complement(2766914..2768197) 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; two-component system sensor protein 2768197 12845120 Q7A_2721 Methylophaga nitratireducenticrescens two-component system sensor protein YP_006297152.1 2766914 R 754476 CDS YP_006297153.1 387128548 12845121 complement(2768194..2768877) 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; two-component system regulatory protein 2768877 12845121 Q7A_2722 Methylophaga nitratireducenticrescens two-component system regulatory protein YP_006297153.1 2768194 R 754476 CDS YP_006297154.1 387128549 12845122 2769087..2770289 1 NC_017857.1 PFAM: Outer membrane efflux protein; outer membrane efflux protein 2770289 12845122 Q7A_2723 Methylophaga nitratireducenticrescens outer membrane efflux protein YP_006297154.1 2769087 D 754476 CDS YP_006297155.1 387128550 12845123 2770286..2771377 1 NC_017857.1 Secretion protein HlyD 2771377 12845123 Q7A_2724 Methylophaga nitratireducenticrescens Secretion protein HlyD YP_006297155.1 2770286 D 754476 CDS YP_006297156.1 387128551 12845124 2771377..2774463 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump 2774463 12845124 Q7A_2725 Methylophaga nitratireducenticrescens heavy metal efflux pump YP_006297156.1 2771377 D 754476 CDS YP_006297157.1 387128552 12845125 2774508..2774789 1 NC_017857.1 PFAM: Protein of unknown function (DUF3240); hypothetical protein 2774789 12845125 Q7A_2726 Methylophaga nitratireducenticrescens hypothetical protein YP_006297157.1 2774508 D 754476 CDS YP_006297158.1 387128553 12845126 complement(2774965..2775129) 1 NC_017857.1 hypothetical protein 2775129 12845126 Q7A_2727 Methylophaga nitratireducenticrescens hypothetical protein YP_006297158.1 2774965 R 754476 CDS YP_006297159.1 387128554 12845127 complement(2775267..2776049) 1 NC_017857.1 hypothetical protein 2776049 12845127 Q7A_2728 Methylophaga nitratireducenticrescens hypothetical protein YP_006297159.1 2775267 R 754476 CDS YP_006297160.1 387128555 12845128 2776247..2777041 1 NC_017857.1 PFAM: Calcineurin-like phosphoesterase; 3',5'-cyclic-nucleotide phosphodiesterase 2777041 12845128 Q7A_2729 Methylophaga nitratireducenticrescens 3',5'-cyclic-nucleotide phosphodiesterase YP_006297160.1 2776247 D 754476 CDS YP_006297161.1 387128556 12845129 2777058..2777930 1 NC_017857.1 PFAM: Diacylglycerol kinase catalytic domain; diacylglycerol kinase 2777930 12845129 Q7A_2730 Methylophaga nitratireducenticrescens diacylglycerol kinase YP_006297161.1 2777058 D 754476 CDS YP_006297162.1 387128557 12845130 2777927..2778382 1 NC_017857.1 hypothetical protein 2778382 12845130 Q7A_2731 Methylophaga nitratireducenticrescens hypothetical protein YP_006297162.1 2777927 D 754476 CDS YP_006297163.1 387128558 12845131 2778449..2779441 1 NC_017857.1 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 2779441 12845131 Q7A_2732 Methylophaga nitratireducenticrescens 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_006297163.1 2778449 D 754476 CDS YP_006297164.1 387128559 12845132 complement(2779513..2779800) 1 NC_017857.1 PFAM: Cytochrome b(N-terminal)/b6/petB; cytochrome B561 2779800 12845132 Q7A_2733 Methylophaga nitratireducenticrescens cytochrome B561 YP_006297164.1 2779513 R 754476 CDS YP_006297165.1 387128560 12845133 complement(2779793..2779969) 1 NC_017857.1 hypothetical protein 2779969 12845133 Q7A_2734 Methylophaga nitratireducenticrescens hypothetical protein YP_006297165.1 2779793 R 754476 CDS YP_006297166.1 387128561 12845134 complement(2780085..2780657) 1 NC_017857.1 hypothetical protein 2780657 12845134 Q7A_2735 Methylophaga nitratireducenticrescens hypothetical protein YP_006297166.1 2780085 R 754476 CDS YP_006297167.1 387128562 12845135 2780758..2780877 1 NC_017857.1 hypothetical protein 2780877 12845135 Q7A_2736 Methylophaga nitratireducenticrescens hypothetical protein YP_006297167.1 2780758 D 754476 CDS YP_006297168.1 387128563 12845136 2781040..2781813 1 NC_017857.1 PFAM: LamB/YcsF family; Lactam utilization protein LamB 2781813 12845136 Q7A_2737 Methylophaga nitratireducenticrescens Lactam utilization protein LamB YP_006297168.1 2781040 D 754476 CDS YP_006297169.1 387128564 12845137 2781813..2782505 1 NC_017857.1 PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; allophanate hydrolase 2 subunit 1 2782505 12845137 Q7A_2738 Methylophaga nitratireducenticrescens allophanate hydrolase 2 subunit 1 YP_006297169.1 2781813 D 754476 CDS YP_006297170.1 387128565 12845138 2782502..2783431 1 NC_017857.1 PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; allophanate hydrolase 2 subunit 2 2783431 12845138 Q7A_2739 Methylophaga nitratireducenticrescens allophanate hydrolase 2 subunit 2 YP_006297170.1 2782502 D 754476 CDS YP_006297171.1 387128566 12845139 complement(2783619..2784488) 1 NC_017857.1 PFAM: Phosphoribulokinase / Uridine kinase family; Phosphoribulokinase 2784488 12845139 Q7A_2740 Methylophaga nitratireducenticrescens Phosphoribulokinase YP_006297171.1 2783619 R 754476 CDS YP_006297172.1 387128567 12845140 complement(2784537..2784815) 1 NC_017857.1 PFAM: Fructose-1-6-bisphosphatase; fructose-1,6-bisphosphatase, type I 2784815 12845140 Q7A_2741 Methylophaga nitratireducenticrescens fructose-1,6-bisphosphatase, type I YP_006297172.1 2784537 R 754476 CDS YP_006297173.1 387128568 12845141 complement(2784895..2785275) 1 NC_017857.1 PFAM: Fructose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase class II 2785275 12845141 Q7A_2742 Methylophaga nitratireducenticrescens fructose-bisphosphate aldolase class II YP_006297173.1 2784895 R 754476 CDS YP_006297174.1 387128569 12845142 2785364..2785480 1 NC_017857.1 hypothetical protein 2785480 12845142 Q7A_2743 Methylophaga nitratireducenticrescens hypothetical protein YP_006297174.1 2785364 D 754476 CDS YP_006297175.1 387128570 12845143 2785644..2785838 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2191); transcriptional regulator of the Arc/MetJ class 2785838 12845143 Q7A_2744 Methylophaga nitratireducenticrescens transcriptional regulator of the Arc/MetJ class YP_006297175.1 2785644 D 754476 CDS YP_006297176.1 387128571 12845144 2785835..2786236 1 NC_017857.1 PFAM: PIN domain; PilT protein domain-containing protein 2786236 12845144 Q7A_2745 Methylophaga nitratireducenticrescens PilT protein domain-containing protein YP_006297176.1 2785835 D 754476 CDS YP_006297177.1 387128572 12845145 complement(2786400..2786570) 1 NC_017857.1 hypothetical protein 2786570 12845145 Q7A_2746 Methylophaga nitratireducenticrescens hypothetical protein YP_006297177.1 2786400 R 754476 CDS YP_006297178.1 387128573 12845146 complement(2786996..2787571) 1 NC_017857.1 PFAM: Antibiotic biosynthesis monooxygenase; hypothetical protein 2787571 12845146 Q7A_2747 Methylophaga nitratireducenticrescens hypothetical protein YP_006297178.1 2786996 R 754476 CDS YP_006297179.1 387128574 12845147 complement(2787956..2788153) 1 NC_017857.1 hypothetical protein 2788153 12845147 Q7A_2748 Methylophaga nitratireducenticrescens hypothetical protein YP_006297179.1 2787956 R 754476 CDS YP_006297180.1 387128575 12845148 complement(2788373..2789812) 1 NC_017857.1 hypothetical protein 2789812 12845148 Q7A_2749 Methylophaga nitratireducenticrescens hypothetical protein YP_006297180.1 2788373 R 754476 CDS YP_006297181.1 387128576 12845149 complement(2790000..2790704) 1 NC_017857.1 PFAM: Protein of unknown function DUF88; TIGRFAM: TIGR00288 family protein; hypothetical protein 2790704 12845149 Q7A_2750 Methylophaga nitratireducenticrescens hypothetical protein YP_006297181.1 2790000 R 754476 CDS YP_006297182.1 387128577 12845150 2791267..2791392 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0156); transcriptional regulator 2791392 12845150 Q7A_2751 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297182.1 2791267 D 754476 CDS YP_006297183.1 387128578 12845151 2791539..2791688 1 NC_017857.1 PFAM: Plasmid stabilisation system protein; ParE toxin protein 2791688 12845151 Q7A_2752 Methylophaga nitratireducenticrescens ParE toxin protein YP_006297183.1 2791539 D 754476 CDS YP_006297184.1 387128579 12845152 complement(2791724..2791861) 1 NC_017857.1 TIGRFAM: addiction module antidote protein, HigA family; HigA protein (antitoxin to HigB) 2791861 12845152 Q7A_2753 Methylophaga nitratireducenticrescens HigA protein (antitoxin to HigB) YP_006297184.1 2791724 R 754476 CDS YP_006297185.1 387128580 12845153 complement(2792017..2792202) 1 NC_017857.1 PFAM: Plasmid maintenance system killer protein; HigB toxin protein 2792202 12845153 Q7A_2754 Methylophaga nitratireducenticrescens HigB toxin protein YP_006297185.1 2792017 R 754476 CDS YP_006297186.1 387128581 12845154 complement(2792974..2793159) 1 NC_017857.1 hypothetical protein 2793159 12845154 Q7A_2755 Methylophaga nitratireducenticrescens hypothetical protein YP_006297186.1 2792974 R 754476 CDS YP_006297187.1 387128582 12845155 complement(2793176..2793490) 1 NC_017857.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; HigA protein (antitoxin to HigB) 2793490 12845155 Q7A_2756 Methylophaga nitratireducenticrescens HigA protein (antitoxin to HigB) YP_006297187.1 2793176 R 754476 CDS YP_006297188.1 387128583 12845156 complement(2793501..2793743) 1 NC_017857.1 PFAM: Plasmid maintenance system killer protein; HigB toxin protein 2793743 12845156 Q7A_2757 Methylophaga nitratireducenticrescens HigB toxin protein YP_006297188.1 2793501 R 754476 CDS YP_006297189.1 387128584 12845157 2793990..2794322 1 NC_017857.1 hypothetical protein 2794322 12845157 Q7A_2758 Methylophaga nitratireducenticrescens hypothetical protein YP_006297189.1 2793990 D 754476 CDS YP_006297190.1 387128585 12845158 2794403..2795185 1 NC_017857.1 PFAM: Multicopper oxidase; multicopper oxidase 2795185 12845158 Q7A_2759 Methylophaga nitratireducenticrescens multicopper oxidase YP_006297190.1 2794403 D 754476 CDS YP_006297191.1 387128586 12845159 2795172..2795900 1 NC_017857.1 PFAM: Copper resistance protein B precursor (CopB); Copper resistance protein B 2795900 12845159 Q7A_2760 Methylophaga nitratireducenticrescens Copper resistance protein B YP_006297191.1 2795172 D 754476 CDS YP_006297192.1 387128587 12845160 2796083..2798299 1 NC_017857.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TonB-dependent receptor 2798299 12845160 Q7A_2761 Methylophaga nitratireducenticrescens TonB-dependent receptor YP_006297192.1 2796083 D 754476 CDS YP_006297193.1 387128588 12845161 complement(2798359..2798835) 1 NC_017857.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; hemolysin III-like membrane protein 2798835 12845161 Q7A_2762 Methylophaga nitratireducenticrescens hemolysin III-like membrane protein YP_006297193.1 2798359 R 754476 CDS YP_006297194.1 387128589 12845162 2799339..2800508 1 NC_017857.1 PFAM: PRC-barrel domain; PRC-barrel protein 2800508 12845162 Q7A_2763 Methylophaga nitratireducenticrescens PRC-barrel protein YP_006297194.1 2799339 D 754476 CDS YP_006297195.1 387128590 12845163 complement(2800542..2800673) 1 NC_017857.1 hypothetical protein 2800673 12845163 Q7A_2764 Methylophaga nitratireducenticrescens hypothetical protein YP_006297195.1 2800542 R 754476 CDS YP_006297196.1 387128591 12845164 complement(2800678..2802297) 1 NC_017857.1 PFAM: Domain of unknown function (DUF477); methanol dehydrogenase 2802297 12845164 Q7A_2765 Methylophaga nitratireducenticrescens methanol dehydrogenase YP_006297196.1 2800678 R 754476 CDS YP_006297197.1 387128592 12845165 complement(2802359..2803276) 1 NC_017857.1 PFAM: LemA family; hypothetical protein 2803276 12845165 Q7A_2766 Methylophaga nitratireducenticrescens hypothetical protein YP_006297197.1 2802359 R 754476 CDS YP_006297198.1 387128593 12845166 complement(2803266..2803586) 1 NC_017857.1 PFAM: Protein of unknown function(DUF2089); hypothetical protein 2803586 12845166 Q7A_2767 Methylophaga nitratireducenticrescens hypothetical protein YP_006297198.1 2803266 R 754476 CDS YP_006297199.1 387128594 12845167 complement(2803739..2803864) 1 NC_017857.1 hypothetical protein 2803864 12845167 Q7A_2768 Methylophaga nitratireducenticrescens hypothetical protein YP_006297199.1 2803739 R 754476 CDS YP_006297200.1 387128595 12845168 complement(2804266..2805189) 1 NC_017857.1 PFAM: EamA-like transporter family; EamA-like transporter family 2805189 12845168 Q7A_2769 Methylophaga nitratireducenticrescens EamA-like transporter family YP_006297200.1 2804266 R 754476 CDS YP_006297201.1 387128596 12845169 complement(2805180..2806361) 1 NC_017857.1 hypothetical protein 2806361 12845169 Q7A_2770 Methylophaga nitratireducenticrescens hypothetical protein YP_006297201.1 2805180 R 754476 CDS YP_006297202.1 387128597 12845170 complement(2806823..2807419) 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; mobC protein 2807419 12845170 Q7A_2771 Methylophaga nitratireducenticrescens mobC protein YP_006297202.1 2806823 R 754476 CDS YP_006297203.1 387128598 12845171 complement(2807488..2807946) 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; elaA protein 2807946 12845171 Q7A_2772 Methylophaga nitratireducenticrescens elaA protein YP_006297203.1 2807488 R 754476 CDS YP_006297204.1 387128599 12845172 complement(2807964..2808635) 1 NC_017857.1 hypothetical protein 2808635 12845172 Q7A_2773 Methylophaga nitratireducenticrescens hypothetical protein YP_006297204.1 2807964 R 754476 CDS YP_006297205.1 387128600 12845173 complement(2808632..2809564) 1 NC_017857.1 PFAM: Aldo/keto reductase family; oxidoreductase protein 2809564 12845173 Q7A_2774 Methylophaga nitratireducenticrescens oxidoreductase protein YP_006297205.1 2808632 R 754476 CDS YP_006297206.1 387128601 12845174 2809600..2809725 1 NC_017857.1 hypothetical protein 2809725 12845174 Q7A_2775 Methylophaga nitratireducenticrescens hypothetical protein YP_006297206.1 2809600 D 754476 CDS YP_006297207.1 387128602 12845175 2809836..2810141 1 NC_017857.1 hypothetical protein 2810141 12845175 Q7A_2776 Methylophaga nitratireducenticrescens hypothetical protein YP_006297207.1 2809836 D 754476 CDS YP_006297208.1 387128603 12845177 2811837..2812184 1 NC_017857.1 PFAM: Protein of unknown function (DUF3325); hypothetical protein 2812184 12845177 Q7A_2779 Methylophaga nitratireducenticrescens hypothetical protein YP_006297208.1 2811837 D 754476 CDS YP_006297209.1 387128604 12845179 complement(2815902..2817923) 1 NC_017857.1 PFAM: DNA methylase; type III restriction-modification system methylation subunit 2817923 12845179 Q7A_2782 Methylophaga nitratireducenticrescens type III restriction-modification system methylation subunit YP_006297209.1 2815902 R 754476 CDS YP_006297210.1 387128605 12845180 complement(2817933..2819096) 1 NC_017857.1 PFAM: Fic/DOC family; Fic family protein 2819096 12845180 Q7A_2783 Methylophaga nitratireducenticrescens Fic family protein YP_006297210.1 2817933 R 754476 CDS YP_006297211.1 387128606 12845181 complement(2819262..2821973) 1 NC_017857.1 PFAM: Type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 2821973 12845181 Q7A_2784 Methylophaga nitratireducenticrescens type III restriction enzyme, res subunit YP_006297211.1 2819262 R 754476 CDS YP_006297212.1 387128607 12845182 complement(2822123..2823394) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; sulfide-quinone reductase 2823394 12845182 Q7A_2785 Methylophaga nitratireducenticrescens sulfide-quinone reductase YP_006297212.1 2822123 R 754476 CDS YP_006297213.1 387128608 12845183 complement(2823407..2824303) 1 NC_017857.1 PFAM: Hsp33 protein; 33 kDa chaperonin (Heat shock protein 33) (HSP33) 2824303 12845183 Q7A_2786 Methylophaga nitratireducenticrescens 33 kDa chaperonin (Heat shock protein 33) (HSP33) YP_006297213.1 2823407 R 754476 CDS YP_006297214.1 387128609 12845184 complement(2824431..2825462) 1 NC_017857.1 hypothetical protein 2825462 12845184 Q7A_2787 Methylophaga nitratireducenticrescens hypothetical protein YP_006297214.1 2824431 R 754476 CDS YP_006297215.1 387128610 12845185 complement(2825610..2826494) 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 2826494 12845185 Q7A_2788 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006297215.1 2825610 R 754476 CDS YP_006297216.1 387128611 12845186 2826758..2827948 1 NC_017857.1 PFAM: Fic/DOC family; Filamentation induced by cAMP protein Fic 2827948 12845186 Q7A_2789 Methylophaga nitratireducenticrescens Filamentation induced by cAMP protein Fic YP_006297216.1 2826758 D 754476 CDS YP_006297217.1 387128612 12845187 complement(2828016..2829923) 1 NC_017857.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; chaperone protein HtpG 2829923 12845187 Q7A_2790 Methylophaga nitratireducenticrescens chaperone protein HtpG YP_006297217.1 2828016 R 754476 CDS YP_006297218.1 387128613 12845188 complement(2830375..2832387) 1 NC_017857.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein I (serine chemoreceptor protein) 2832387 12845188 Q7A_2791 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis protein I (serine chemoreceptor protein) YP_006297218.1 2830375 R 754476 CDS YP_006297219.1 387128614 12845189 complement(2832402..2834894) 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2834894 12845189 Q7A_2792 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006297219.1 2832402 R 754476 CDS YP_006297220.1 387128615 12845190 2835339..2836091 1 NC_017857.1 PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase family protein 2836091 12845190 Q7A_2793 Methylophaga nitratireducenticrescens endonuclease/exonuclease/phosphatase family protein YP_006297220.1 2835339 D 754476 CDS YP_006297221.1 387128616 12845191 2836197..2837132 1 NC_017857.1 PFAM: Domain of unknown function (DUF897); sodium-dependent bicarbonate transporter 2837132 12845191 Q7A_2794 Methylophaga nitratireducenticrescens sodium-dependent bicarbonate transporter YP_006297221.1 2836197 D 754476 CDS YP_006297222.1 387128617 12845192 2837251..2838171 1 NC_017857.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Cobalt-zinc-cadmium resistance protein CzcD 2838171 12845192 Q7A_2795 Methylophaga nitratireducenticrescens Cobalt-zinc-cadmium resistance protein CzcD YP_006297222.1 2837251 D 754476 CDS YP_006297223.1 387128618 12845193 complement(2838190..2838522) 1 NC_017857.1 hypothetical protein 2838522 12845193 Q7A_2796 Methylophaga nitratireducenticrescens hypothetical protein YP_006297223.1 2838190 R 754476 CDS YP_006297224.1 387128619 12845194 2838795..2839094 1 NC_017857.1 PFAM: Protein of unknown function (DUF421); hypothetical protein 2839094 12845194 Q7A_2797 Methylophaga nitratireducenticrescens hypothetical protein YP_006297224.1 2838795 D 754476 CDS YP_006297225.1 387128620 12845195 2839207..2839542 1 NC_017857.1 PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein 2839542 12845195 Q7A_2798 Methylophaga nitratireducenticrescens cold-shock protein YP_006297225.1 2839207 D 754476 CDS YP_006297226.1 387128621 12845196 complement(2839574..2840029) 1 NC_017857.1 PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative; Histone acetyltransferase HPA2-related acetyltransferase 2840029 12845196 Q7A_2799 Methylophaga nitratireducenticrescens Histone acetyltransferase HPA2-related acetyltransferase YP_006297226.1 2839574 R 754476 CDS YP_006297227.1 387128622 12845197 complement(2840039..2840737) 1 NC_017857.1 PFAM: Glutamine amidotransferase class-I; GMP synthase 2840737 12845197 Q7A_2800 Methylophaga nitratireducenticrescens GMP synthase YP_006297227.1 2840039 R 754476 CDS YP_006297228.1 387128623 12845198 2840961..2841503 1 NC_017857.1 PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein; hypothetical protein 2841503 12845198 Q7A_2801 Methylophaga nitratireducenticrescens hypothetical protein YP_006297228.1 2840961 D 754476 CDS YP_006297229.1 387128624 12845199 2841588..2841737 1 NC_017857.1 PFAM: Protein of unknown function (DUF3096); hypothetical protein 2841737 12845199 Q7A_2802 Methylophaga nitratireducenticrescens hypothetical protein YP_006297229.1 2841588 D 754476 CDS YP_006297230.1 387128625 12845200 complement(2841908..2842231) 1 NC_017857.1 hypothetical protein 2842231 12845200 Q7A_2803 Methylophaga nitratireducenticrescens hypothetical protein YP_006297230.1 2841908 R 754476 CDS YP_006297231.1 387128626 12845201 complement(2842320..2842712) 1 NC_017857.1 PFAM: AIG2-like family; hypothetical protein 2842712 12845201 Q7A_2804 Methylophaga nitratireducenticrescens hypothetical protein YP_006297231.1 2842320 R 754476 CDS YP_006297232.1 387128627 12845202 2843041..2843976 1 NC_017857.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl-Q-tRNA synthetase 2843976 12845202 Q7A_2805 Methylophaga nitratireducenticrescens glutamyl-Q-tRNA synthetase YP_006297232.1 2843041 D 754476 CDS YP_006297233.1 387128628 12845203 complement(2843986..2844486) 1 NC_017857.1 hypothetical protein 2844486 12845203 Q7A_2806 Methylophaga nitratireducenticrescens hypothetical protein YP_006297233.1 2843986 R 754476 CDS YP_006297234.1 387128629 12845204 complement(2844511..2844816) 1 NC_017857.1 PFAM: Protein of unknown function (DUF1311); hypothetical protein 2844816 12845204 Q7A_2807 Methylophaga nitratireducenticrescens hypothetical protein YP_006297234.1 2844511 R 754476 CDS YP_006297235.1 387128630 12845205 complement(2844971..2846530) 1 NC_017857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2846530 12845205 Q7A_2808 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006297235.1 2844971 R 754476 CDS YP_006297236.1 387128631 12845206 complement(2846717..2848936) 1 NC_017857.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; haloacid dehalogenase-like hydrolase 2848936 12845206 Q7A_2809 Methylophaga nitratireducenticrescens haloacid dehalogenase-like hydrolase YP_006297236.1 2846717 R 754476 CDS YP_006297237.1 387128632 12845207 2849218..2850747 1 NC_017857.1 PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; carbon-nitrogen hydrolase 2850747 12845207 Q7A_2810 Methylophaga nitratireducenticrescens carbon-nitrogen hydrolase YP_006297237.1 2849218 D 754476 CDS YP_006297238.1 387128633 12845208 complement(2850753..2852186) 1 NC_017857.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; type cbb3 cytochrome oxidase biogenesis protein CcoG 2852186 12845208 Q7A_2811 Methylophaga nitratireducenticrescens type cbb3 cytochrome oxidase biogenesis protein CcoG YP_006297238.1 2850753 R 754476 CDS YP_006297239.1 387128634 12845209 complement(2852206..2853597) 1 NC_017857.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; transcriptional regulator/ Aspartate aminotransferase 2853597 12845209 Q7A_2812 Methylophaga nitratireducenticrescens transcriptional regulator/ Aspartate aminotransferase YP_006297239.1 2852206 R 754476 CDS YP_006297240.1 387128635 12845210 complement(2853835..2856423) 1 NC_017857.1 PFAM: EAL domain; GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase 2856423 12845210 Q7A_2813 Methylophaga nitratireducenticrescens diguanylate cyclase/phosphodiesterase YP_006297240.1 2853835 R 754476 CDS YP_006297241.1 387128636 12845211 complement(2856497..2857045) 1 NC_017857.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase 2857045 12845211 Q7A_2814 Methylophaga nitratireducenticrescens 2'-5' RNA ligase YP_006297241.1 2856497 R 754476 CDS YP_006297242.1 387128637 12845212 complement(2857047..2858330) 1 NC_017857.1 PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2858330 12845212 Q7A_2815 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006297242.1 2857047 R 754476 CDS YP_006297243.1 387128638 12845213 complement(2858494..2859264) 1 NC_017857.1 PFAM: Protein of unknown function (DUF328); hypothetical protein 2859264 12845213 Q7A_2816 Methylophaga nitratireducenticrescens hypothetical protein YP_006297243.1 2858494 R 754476 CDS YP_006297244.1 387128639 12845214 complement(2859287..2859652) 1 NC_017857.1 lipase 2859652 12845214 Q7A_2817 Methylophaga nitratireducenticrescens lipase YP_006297244.1 2859287 R 754476 CDS YP_006297245.1 387128640 12845215 2859813..2860340 1 NC_017857.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; TRAP-type mannitol/chloroaromatic compound transport system, small permease component 2860340 12845215 Q7A_2818 Methylophaga nitratireducenticrescens TRAP-type mannitol/chloroaromatic compound transport system, small permease component YP_006297245.1 2859813 D 754476 CDS YP_006297246.1 387128641 12845216 2860340..2861644 1 NC_017857.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2861644 12845216 Q7A_2819 Methylophaga nitratireducenticrescens TRAP C4-dicarboxylate transport system permease DctM YP_006297246.1 2860340 D 754476 CDS YP_006297247.1 387128642 12845217 complement(2861646..2862611) 1 NC_017857.1 PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX; translation elongation factor P Lys34:lysine transferase 2862611 12845217 Q7A_2820 Methylophaga nitratireducenticrescens translation elongation factor P Lys34:lysine transferase YP_006297247.1 2861646 R 754476 CDS YP_006297248.1 387128643 12845218 complement(2862684..2863211) 1 NC_017857.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P 2863211 12845218 Q7A_2821 Methylophaga nitratireducenticrescens translation elongation factor P YP_006297248.1 2862684 R 754476 CDS YP_006297249.1 387128644 12845219 2863310..2864317 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein; Lysyl-lysine 2,3-aminomutase 2864317 12845219 Q7A_2822 Methylophaga nitratireducenticrescens Lysyl-lysine 2,3-aminomutase YP_006297249.1 2863310 D 754476 CDS YP_006297250.1 387128645 12845220 complement(2864307..2865482) 1 NC_017857.1 PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Citrate synthase (si) 2865482 12845220 Q7A_2823 Methylophaga nitratireducenticrescens Citrate synthase (si) YP_006297250.1 2864307 R 754476 CDS YP_006297251.1 387128646 12845221 complement(2865594..2866865) 1 NC_017857.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit 2866865 12845221 Q7A_2824 Methylophaga nitratireducenticrescens sulfide dehydrogenase (flavocytochrome C) flavoprotein subunit YP_006297251.1 2865594 R 754476 CDS YP_006297252.1 387128647 12845222 complement(2866896..2867855) 1 NC_017857.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoate synthase 2867855 12845222 Q7A_2825 Methylophaga nitratireducenticrescens lipoate synthase YP_006297252.1 2866896 R 754476 CDS YP_006297253.1 387128648 12845223 complement(2867858..2868466) 1 NC_017857.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase 2868466 12845223 Q7A_2826 Methylophaga nitratireducenticrescens Octanoate-(acyl-carrier-protein)-protein-N-octan oyltransferase YP_006297253.1 2867858 R 754476 CDS YP_006297254.1 387128649 12845224 complement(2868466..2868741) 1 NC_017857.1 PFAM: Protein of unknown function (DUF493); lipoate regulatory protein YbeD 2868741 12845224 Q7A_2827 Methylophaga nitratireducenticrescens lipoate regulatory protein YbeD YP_006297254.1 2868466 R 754476 CDS YP_006297255.1 387128650 12845225 complement(2868741..2869586) 1 NC_017857.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; D-alanine aminotransferase 2869586 12845225 Q7A_2828 Methylophaga nitratireducenticrescens D-alanine aminotransferase YP_006297255.1 2868741 R 754476 CDS YP_006297256.1 387128651 12845226 complement(2869593..2870741) 1 NC_017857.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 2870741 12845226 Q7A_2829 Methylophaga nitratireducenticrescens D-alanyl-D-alanine carboxypeptidase YP_006297256.1 2869593 R 754476 CDS YP_006297257.1 387128652 12845227 complement(2870766..2871617) 1 NC_017857.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; Rare lipoprotein A 2871617 12845227 Q7A_2830 Methylophaga nitratireducenticrescens Rare lipoprotein A YP_006297257.1 2870766 R 754476 CDS YP_006297258.1 387128653 12845228 complement(2871614..2872594) 1 NC_017857.1 TIGRFAM: lytic murein transglycosylase B; membrane-bound lytic murein transglycosylase B precursor 2872594 12845228 Q7A_2831 Methylophaga nitratireducenticrescens membrane-bound lytic murein transglycosylase B precursor YP_006297258.1 2871614 R 754476 CDS YP_006297259.1 387128654 12845229 complement(2872591..2873664) 1 NC_017857.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Rod shape-determining protein RodA 2873664 12845229 Q7A_2832 Methylophaga nitratireducenticrescens Rod shape-determining protein RodA YP_006297259.1 2872591 R 754476 CDS YP_006297260.1 387128655 12845230 complement(2873744..2875612) 1 NC_017857.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 (PBP-2) 2875612 12845230 Q7A_2833 Methylophaga nitratireducenticrescens penicillin-binding protein 2 (PBP-2) YP_006297260.1 2873744 R 754476 CDS YP_006297261.1 387128656 12845231 complement(2875615..2876091) 1 NC_017857.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; Rod shape-determining protein MreD 2876091 12845231 Q7A_2834 Methylophaga nitratireducenticrescens Rod shape-determining protein MreD YP_006297261.1 2875615 R 754476 CDS YP_006297262.1 387128657 12845232 complement(2876091..2876981) 1 NC_017857.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; Rod shape-determining protein MreC 2876981 12845232 Q7A_2835 Methylophaga nitratireducenticrescens Rod shape-determining protein MreC YP_006297262.1 2876091 R 754476 CDS YP_006297263.1 387128658 12845233 complement(2877108..2878241) 1 NC_017857.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; Rod shape-determining protein MreB 2878241 12845233 Q7A_2836 Methylophaga nitratireducenticrescens Rod shape-determining protein MreB YP_006297263.1 2877108 R 754476 CDS YP_006297264.1 387128659 12845234 2878275..2878562 1 NC_017857.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Aspartyl-tRNA(Asn) amidotransferase subunit C @ Glutamyl-tRNA(Gln) amidotransferase subunit C 2878562 12845234 Q7A_2837 Methylophaga nitratireducenticrescens Aspartyl-tRNA(Asn) amidotransferase subunit C @ Glutamyl-tRNA(Gln) amidotransferase subunit C YP_006297264.1 2878275 D 754476 CDS YP_006297265.1 387128660 12845235 2878583..2880037 1 NC_017857.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A 2880037 12845235 Q7A_2838 Methylophaga nitratireducenticrescens aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A YP_006297265.1 2878583 D 754476 CDS YP_006297266.1 387128661 12845236 2880254..2881891 1 NC_017857.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-requiring enzyme 2881891 12845236 Q7A_2839 Methylophaga nitratireducenticrescens thiamine pyrophosphate-requiring enzyme YP_006297266.1 2880254 D 754476 CDS YP_006297267.1 387128662 12845237 2881893..2882396 1 NC_017857.1 PFAM: AhpC/TSA family; thioredoxin 2882396 12845237 Q7A_2840 Methylophaga nitratireducenticrescens thioredoxin YP_006297267.1 2881893 D 754476 CDS YP_006297268.1 387128663 12845238 2882521..2882757 1 NC_017857.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 2882757 12845238 Q7A_2841 Methylophaga nitratireducenticrescens 50S ribosomal protein L28 YP_006297268.1 2882521 D 754476 CDS YP_006297269.1 387128664 12845239 2882769..2882924 1 NC_017857.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 2882924 12845239 Q7A_2842 Methylophaga nitratireducenticrescens 50S ribosomal protein L33 YP_006297269.1 2882769 D 754476 CDS YP_006297270.1 387128665 12845240 2883032..2884246 1 NC_017857.1 PFAM: EAL domain; HDOD domain; signal transduction protein 2884246 12845240 Q7A_2843 Methylophaga nitratireducenticrescens signal transduction protein YP_006297270.1 2883032 D 754476 CDS YP_006297271.1 387128666 12845241 2884253..2885197 1 NC_017857.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 2885197 12845241 Q7A_2844 Methylophaga nitratireducenticrescens multidrug ABC transporter ATPase YP_006297271.1 2884253 D 754476 CDS YP_006297272.1 387128667 12845242 2885197..2885949 1 NC_017857.1 ABC transporter permease 2885949 12845242 Q7A_2845 Methylophaga nitratireducenticrescens ABC transporter permease YP_006297272.1 2885197 D 754476 CDS YP_006297273.1 387128668 12845243 2885952..2887313 1 NC_017857.1 PFAM: ABC-type uncharacterized transport system; mucin 2 2887313 12845243 Q7A_2846 Methylophaga nitratireducenticrescens mucin 2 YP_006297273.1 2885952 D 754476 CDS YP_006297274.1 387128669 12845244 2887310..2888179 1 NC_017857.1 hypothetical protein 2888179 12845244 Q7A_2847 Methylophaga nitratireducenticrescens hypothetical protein YP_006297274.1 2887310 D 754476 CDS YP_006297275.1 387128670 12845245 2888181..2888999 1 NC_017857.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase 2888999 12845245 Q7A_2848 Methylophaga nitratireducenticrescens formamidopyrimidine-DNA glycosylase YP_006297275.1 2888181 D 754476 CDS YP_006297276.1 387128671 12845246 complement(2889007..2889291) 1 NC_017857.1 PFAM: Cytochrome c; cytochrome c, class I 2889291 12845246 Q7A_2849 Methylophaga nitratireducenticrescens cytochrome c, class I YP_006297276.1 2889007 R 754476 CDS YP_006297277.1 387128672 12845247 2889369..2890334 1 NC_017857.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase D 2890334 12845247 Q7A_2850 Methylophaga nitratireducenticrescens ribosomal large subunit pseudouridine synthase D YP_006297277.1 2889369 D 754476 CDS YP_006297278.1 387128673 12845248 2890350..2891543 1 NC_017857.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; chromate transport protein ChrA 2891543 12845248 Q7A_2851 Methylophaga nitratireducenticrescens chromate transport protein ChrA YP_006297278.1 2890350 D 754476 CDS YP_006297279.1 387128674 12845250 2892893..2893411 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor 2893411 12845250 Q7A_2854 Methylophaga nitratireducenticrescens RNA polymerase sigma factor YP_006297279.1 2892893 D 754476 CDS YP_006297280.1 387128675 12845251 complement(2893420..2893830) 1 NC_017857.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TonB 2893830 12845251 Q7A_2855 Methylophaga nitratireducenticrescens TonB YP_006297280.1 2893420 R 754476 CDS YP_006297281.1 387128676 12845252 2893785..2894066 1 NC_017857.1 hypothetical protein 2894066 12845252 Q7A_2856 Methylophaga nitratireducenticrescens hypothetical protein YP_006297281.1 2893785 D 754476 CDS YP_006297282.1 387128677 12845253 complement(2894360..2894791) 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1; biopolymer transport protein ExbD/TolR 2894791 12845253 Q7A_2857 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006297282.1 2894360 R 754476 CDS YP_006297283.1 387128678 12845254 complement(2894788..2895702) 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB; motA/TolQ/ExbB proton channel family protein 2895702 12845254 Q7A_2858 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006297283.1 2894788 R 754476 CDS YP_006297284.1 387128679 12845255 complement(2895751..2896137) 1 NC_017857.1 PFAM: Protein of unknown function (DUF454); hypothetical protein 2896137 12845255 Q7A_2859 Methylophaga nitratireducenticrescens hypothetical protein YP_006297284.1 2895751 R 754476 CDS YP_006297285.1 387128680 12845256 complement(2896137..2896760) 1 NC_017857.1 PFAM: Heme oxygenase; Heme oxygenase HemO 2896760 12845256 Q7A_2860 Methylophaga nitratireducenticrescens Heme oxygenase HemO YP_006297285.1 2896137 R 754476 CDS YP_006297286.1 387128681 12845257 complement(2896846..2898165) 1 NC_017857.1 hypothetical protein 2898165 12845257 Q7A_2861 Methylophaga nitratireducenticrescens hypothetical protein YP_006297286.1 2896846 R 754476 CDS YP_006297287.1 387128682 12845258 complement(2898194..2899768) 1 NC_017857.1 PFAM: Protein of unknown function (DUF560); hypothetical protein 2899768 12845258 Q7A_2862 Methylophaga nitratireducenticrescens hypothetical protein YP_006297287.1 2898194 R 754476 CDS YP_006297288.1 387128683 12845259 complement(2899782..2900522) 1 NC_017857.1 hypothetical protein 2900522 12845259 Q7A_2863 Methylophaga nitratireducenticrescens hypothetical protein YP_006297288.1 2899782 R 754476 CDS YP_006297289.1 387128684 12845260 complement(2900610..2903651) 1 NC_017857.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; Ton-B dependent hemine receptor 2903651 12845260 Q7A_2864 Methylophaga nitratireducenticrescens Ton-B dependent hemine receptor YP_006297289.1 2900610 R 754476 CDS YP_006297290.1 387128685 12845261 complement(2903793..2904749) 1 NC_017857.1 PFAM: FecR protein; FecR protein 2904749 12845261 Q7A_2865 Methylophaga nitratireducenticrescens FecR protein YP_006297290.1 2903793 R 754476 CDS YP_006297291.1 387128686 12845262 complement(2904976..2906928) 1 NC_017857.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor G 2906928 12845262 Q7A_2866 Methylophaga nitratireducenticrescens translation elongation factor G YP_006297291.1 2904976 R 754476 CDS YP_006297292.1 387128687 12845263 2906944..2907057 1 NC_017857.1 hypothetical protein 2907057 12845263 Q7A_2867 Methylophaga nitratireducenticrescens hypothetical protein YP_006297292.1 2906944 D 754476 CDS YP_006297293.1 387128688 12845264 complement(2907261..2907566) 1 NC_017857.1 PFAM: Protein of unknown function (DUF2818); transmembrane protein 2907566 12845264 Q7A_2868 Methylophaga nitratireducenticrescens transmembrane protein YP_006297293.1 2907261 R 754476 CDS YP_006297294.1 387128689 12845265 complement(2907575..2909008) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH-ubiquinone oxidoreductase subunit N 2909008 12845265 Q7A_2869 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit N YP_006297294.1 2907575 R 754476 CDS YP_006297295.1 387128690 12845266 complement(2909021..2910541) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; NADH-ubiquinone oxidoreductase subunit M 2910541 12845266 Q7A_2870 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit M YP_006297295.1 2909021 R 754476 CDS YP_006297296.1 387128691 12845267 complement(2910557..2912494) 1 NC_017857.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH-ubiquinone oxidoreductase subunit L 2912494 12845267 Q7A_2871 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit L YP_006297296.1 2910557 R 754476 CDS YP_006297297.1 387128692 12845268 complement(2912499..2912804) 1 NC_017857.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit K 2912804 12845268 Q7A_2872 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit K YP_006297297.1 2912499 R 754476 CDS YP_006297298.1 387128693 12845269 complement(2912801..2913409) 1 NC_017857.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone oxidoreductase subunit J 2913409 12845269 Q7A_2873 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit J YP_006297298.1 2912801 R 754476 CDS YP_006297299.1 387128694 12845270 complement(2913421..2913912) 1 NC_017857.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-ubiquinone oxidoreductase subunit I 2913912 12845270 Q7A_2874 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit I YP_006297299.1 2913421 R 754476 CDS YP_006297300.1 387128695 12845271 complement(2913909..2914961) 1 NC_017857.1 PFAM: NADH dehydrogenase; NADH-ubiquinone oxidoreductase subunit H 2914961 12845271 Q7A_2875 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit H YP_006297300.1 2913909 R 754476 CDS YP_006297301.1 387128696 12845272 complement(2914954..2917317) 1 NC_017857.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G; NADH-ubiquinone oxidoreductase subunit G 2917317 12845272 Q7A_2876 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit G YP_006297301.1 2914954 R 754476 CDS YP_006297302.1 387128697 12845273 complement(2917310..2918608) 1 NC_017857.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH-ubiquinone oxidoreductase subunit F 2918608 12845273 Q7A_2877 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit F YP_006297302.1 2917310 R 754476 CDS YP_006297303.1 387128698 12845274 complement(2918608..2919120) 1 NC_017857.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH-ubiquinone oxidoreductase subunit E 2919120 12845274 Q7A_2878 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit E YP_006297303.1 2918608 R 754476 CDS YP_006297304.1 387128699 12845275 complement(2919117..2920370) 1 NC_017857.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH-ubiquinone oxidoreductase subunit D 2920370 12845275 Q7A_2879 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit D YP_006297304.1 2919117 R 754476 CDS YP_006297305.1 387128700 12845276 complement(2920370..2921038) 1 NC_017857.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH-ubiquinone oxidoreductase subunit C 2921038 12845276 Q7A_2880 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit C YP_006297305.1 2920370 R 754476 CDS YP_006297306.1 387128701 12845277 complement(2921048..2921536) 1 NC_017857.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-ubiquinone oxidoreductase subunit B 2921536 12845277 Q7A_2881 Methylophaga nitratireducenticrescens NADH-ubiquinone oxidoreductase subunit B YP_006297306.1 2921048 R 754476 CDS YP_006297307.1 387128702 12845278 complement(2921527..2921859) 1 NC_017857.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH ubiquinone oxidoreductase subunit A 2921859 12845278 Q7A_2882 Methylophaga nitratireducenticrescens NADH ubiquinone oxidoreductase subunit A YP_006297307.1 2921527 R 754476 CDS YP_006297308.1 387128703 12845279 2922319..2923209 1 NC_017857.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein; protein rarD 2923209 12845279 Q7A_2883 Methylophaga nitratireducenticrescens protein rarD YP_006297308.1 2922319 D 754476 CDS YP_006297309.1 387128704 12845281 complement(2924219..2925094) 1 NC_017857.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial; hypothetical protein 2925094 12845281 Q7A_2886 Methylophaga nitratireducenticrescens hypothetical protein YP_006297309.1 2924219 R 754476 CDS YP_006297310.1 387128705 12845282 complement(2925091..2926635) 1 NC_017857.1 hypothetical protein 2926635 12845282 Q7A_2887 Methylophaga nitratireducenticrescens hypothetical protein YP_006297310.1 2925091 R 754476 CDS YP_006297311.1 387128706 12845283 complement(2926729..2927169) 1 NC_017857.1 PFAM: Ethanolamine utilisation protein EutQ; ethanolamine utilization protein 2927169 12845283 Q7A_2888 Methylophaga nitratireducenticrescens ethanolamine utilization protein YP_006297311.1 2926729 R 754476 CDS YP_006297312.1 387128707 12845284 2927424..2928803 1 NC_017857.1 PFAM: Helix-turn-helix; PAS fold; TIGRFAM: PAS domain S-box; hypothetical protein 2928803 12845284 Q7A_2889 Methylophaga nitratireducenticrescens hypothetical protein YP_006297312.1 2927424 D 754476 CDS YP_006297313.1 387128708 12845285 2929418..2929555 1 NC_017857.1 ISDet2, transposase orfB 2929555 12845285 Q7A_2890 Methylophaga nitratireducenticrescens ISDet2, transposase orfB YP_006297313.1 2929418 D 754476 CDS YP_006297314.1 387128709 12845286 complement(2929821..2931026) 1 NC_017857.1 PFAM: Phage integrase family; integrase 2931026 12845286 Q7A_2891 Methylophaga nitratireducenticrescens integrase YP_006297314.1 2929821 R 754476 CDS YP_006297315.1 387128710 12845288 complement(2931295..2931621) 1 NC_017857.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; TC 3.A.5.1.1; preprotein translocase subunit SecG 2931621 12845288 Q7A_2893 Methylophaga nitratireducenticrescens preprotein translocase subunit SecG YP_006297315.1 2931295 R 754476 CDS YP_006297316.1 387128711 12845289 complement(2931630..2932409) 1 NC_017857.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 2932409 12845289 Q7A_2894 Methylophaga nitratireducenticrescens triosephosphate isomerase YP_006297316.1 2931630 R 754476 CDS YP_006297317.1 387128712 12845290 complement(2932513..2933862) 1 NC_017857.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase 2933862 12845290 Q7A_2895 Methylophaga nitratireducenticrescens phosphoglucosamine mutase YP_006297317.1 2932513 R 754476 CDS YP_006297318.1 387128713 12845291 complement(2933855..2934694) 1 NC_017857.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase 2934694 12845291 Q7A_2896 Methylophaga nitratireducenticrescens dihydropteroate synthase YP_006297318.1 2933855 R 754476 CDS YP_006297319.1 387128714 12845292 complement(2934708..2936609) 1 NC_017857.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; cell division protein FtsH 2936609 12845292 Q7A_2897 Methylophaga nitratireducenticrescens cell division protein FtsH YP_006297319.1 2934708 R 754476 CDS YP_006297320.1 387128715 12845293 complement(2936655..2937272) 1 NC_017857.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J 2937272 12845293 Q7A_2898 Methylophaga nitratireducenticrescens cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase J YP_006297320.1 2936655 R 754476 CDS YP_006297321.1 387128716 12845294 complement(2937274..2937738) 1 NC_017857.1 transmembrane protein 2937738 12845294 Q7A_2899 Methylophaga nitratireducenticrescens transmembrane protein YP_006297321.1 2937274 R 754476 CDS YP_006297322.1 387128717 12845295 complement(2937742..2938218) 1 NC_017857.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA 2938218 12845295 Q7A_2900 Methylophaga nitratireducenticrescens transcription elongation factor GreA YP_006297322.1 2937742 R 754476 CDS YP_006297323.1 387128718 12845296 complement(2938218..2941436) 1 NC_017857.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 2941436 12845296 Q7A_2901 Methylophaga nitratireducenticrescens carbamoyl-phosphate synthase large subunit YP_006297323.1 2938218 R 754476 CDS YP_006297324.1 387128719 12845298 complement(2941443..2942573) 1 NC_017857.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 2942573 12845298 Q7A_2902 Methylophaga nitratireducenticrescens carbamoyl-phosphate synthase small subunit YP_006297324.1 2941443 R 754476 CDS YP_006297325.1 387128720 12845299 2942738..2943748 1 NC_017857.1 PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2943748 12845299 Q7A_2903 Methylophaga nitratireducenticrescens porphobilinogen synthase YP_006297325.1 2942738 D 754476 CDS YP_006297326.1 387128721 12845300 2943751..2944572 1 NC_017857.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 2944572 12845300 Q7A_2904 Methylophaga nitratireducenticrescens shikimate 5-dehydrogenase YP_006297326.1 2943751 D 754476 CDS YP_006297327.1 387128722 12845301 complement(2944633..2945094) 1 NC_017857.1 hypothetical protein 2945094 12845301 Q7A_2905 Methylophaga nitratireducenticrescens hypothetical protein YP_006297327.1 2944633 R 754476 CDS YP_006297328.1 387128723 12845302 2945279..2945965 1 NC_017857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; Copper-sensing two-component system response regulator CpxR 2945965 12845302 Q7A_2906 Methylophaga nitratireducenticrescens Copper-sensing two-component system response regulator CpxR YP_006297328.1 2945279 D 754476 CDS YP_006297329.1 387128724 12845303 2945965..2947305 1 NC_017857.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel histidine kinase KdpD 2947305 12845303 Q7A_2907 Methylophaga nitratireducenticrescens Osmosensitive K+ channel histidine kinase KdpD YP_006297329.1 2945965 D 754476 CDS YP_006297330.1 387128725 12845304 complement(2947332..2947844) 1 NC_017857.1 PFAM: Copper/zinc superoxide dismutase (SODC); superoxide dismutase (Cu-Zn) precursor 2947844 12845304 Q7A_2908 Methylophaga nitratireducenticrescens superoxide dismutase (Cu-Zn) precursor YP_006297330.1 2947332 R 754476 CDS YP_006297331.1 387128726 12845305 complement(2947931..2951107) 1 NC_017857.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; inner membrane transporter CmeB 2951107 12845305 Q7A_2909 Methylophaga nitratireducenticrescens inner membrane transporter CmeB YP_006297331.1 2947931 R 754476 CDS YP_006297332.1 387128727 12845306 complement(2951104..2952279) 1 NC_017857.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Co/Zn/Cd efflux system membrane fusion protein 2952279 12845306 Q7A_2910 Methylophaga nitratireducenticrescens Co/Zn/Cd efflux system membrane fusion protein YP_006297332.1 2951104 R 754476 CDS YP_006297333.1 387128728 12845307 2952426..2952923 1 NC_017857.1 PFAM: MarR family; marR family transcriptional regulator 2952923 12845307 Q7A_2911 Methylophaga nitratireducenticrescens marR family transcriptional regulator YP_006297333.1 2952426 D 754476 CDS YP_006297334.1 387128729 12845308 complement(2953176..2953481) 1 NC_017857.1 PFAM: Cell division protein ZapA; Z-ring-associated protein ZapA 2953481 12845308 Q7A_2912 Methylophaga nitratireducenticrescens Z-ring-associated protein ZapA YP_006297334.1 2953176 R 754476 CDS YP_006297335.1 387128730 12845309 complement(2953478..2953687) 1 NC_017857.1 TIGRFAM: TIGR02449 family protein; hypothetical protein 2953687 12845309 Q7A_2913 Methylophaga nitratireducenticrescens hypothetical protein YP_006297335.1 2953478 R 754476 CDS YP_006297336.1 387128731 12845310 2953793..2954341 1 NC_017857.1 PFAM: Uncharacterised protein family (UPF0149); hypothetical protein 2954341 12845310 Q7A_2914 Methylophaga nitratireducenticrescens hypothetical protein YP_006297336.1 2953793 D 754476 CDS YP_006297337.1 387128732 12845311 2954341..2955651 1 NC_017857.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; Xaa-Pro aminopeptidase 2955651 12845311 Q7A_2915 Methylophaga nitratireducenticrescens Xaa-Pro aminopeptidase YP_006297337.1 2954341 D 754476 CDS YP_006297338.1 387128733 12845312 2955656..2956858 1 NC_017857.1 PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenol hydroxylase 2956858 12845312 Q7A_2916 Methylophaga nitratireducenticrescens 2-octaprenyl-6-methoxyphenol hydroxylase YP_006297338.1 2955656 D 754476 CDS YP_006297339.1 387128734 12845313 2956855..2958027 1 NC_017857.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2958027 12845313 Q7A_2917 Methylophaga nitratireducenticrescens 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_006297339.1 2956855 D 754476 CDS YP_006297340.1 387128735 12845314 complement(2958032..2958724) 1 NC_017857.1 lipoprotein 2958724 12845314 Q7A_2918 Methylophaga nitratireducenticrescens lipoprotein YP_006297340.1 2958032 R 754476 CDS YP_006297341.1 387128736 12845315 complement(2958711..2958965) 1 NC_017857.1 hypothetical protein 2958965 12845315 Q7A_2919 Methylophaga nitratireducenticrescens hypothetical protein YP_006297341.1 2958711 R 754476 CDS YP_006297342.1 387128737 12845316 complement(2959027..2960343) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; ATP-dependent RNA helicase RhlB 2960343 12845316 Q7A_2920 Methylophaga nitratireducenticrescens ATP-dependent RNA helicase RhlB YP_006297342.1 2959027 R 754476 CDS YP_006297343.1 387128738 12845317 2960444..2960770 1 NC_017857.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 2960770 12845317 Q7A_2921 Methylophaga nitratireducenticrescens thioredoxin YP_006297343.1 2960444 D 754476 CDS YP_006297344.1 387128739 12845318 2960901..2963063 1 NC_017857.1 PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; ATP-dependent DNA helicase UvrD/PcrA 2963063 12845318 Q7A_2922 Methylophaga nitratireducenticrescens ATP-dependent DNA helicase UvrD/PcrA YP_006297344.1 2960901 D 754476 CDS YP_006297345.1 387128740 12845319 2963079..2964176 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 2964176 12845319 Q7A_2923 Methylophaga nitratireducenticrescens TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component YP_006297345.1 2963079 D 754476 CDS YP_006297346.1 387128741 12845320 2964179..2964430 1 NC_017857.1 hypothetical protein 2964430 12845320 Q7A_2924 Methylophaga nitratireducenticrescens hypothetical protein YP_006297346.1 2964179 D 754476 CDS YP_006297347.1 387128742 12845321 2964417..2964950 1 NC_017857.1 PFAM: Protein of unknown function, DUF; copper amine oxidase N-terminal protein 2964950 12845321 Q7A_2925 Methylophaga nitratireducenticrescens copper amine oxidase N-terminal protein YP_006297347.1 2964417 D 754476 CDS YP_006297348.1 387128743 12845322 2964950..2965822 1 NC_017857.1 PFAM: EamA-like transporter family; drug/metabolite transporter (DMT) superfamily permease 2965822 12845322 Q7A_2926 Methylophaga nitratireducenticrescens drug/metabolite transporter (DMT) superfamily permease YP_006297348.1 2964950 D 754476 CDS YP_006297349.1 387128744 12845323 2965921..2966817 1 NC_017857.1 PFAM: DEAD/DEAH box helicase; ATP-dependent RNA helicase SrmB 2966817 12845323 Q7A_2927 Methylophaga nitratireducenticrescens ATP-dependent RNA helicase SrmB YP_006297349.1 2965921 D 754476 CDS YP_006297350.1 387128745 12845324 2967018..2967140 1 NC_017857.1 hypothetical protein 2967140 12845324 Q7A_2928 Methylophaga nitratireducenticrescens hypothetical protein YP_006297350.1 2967018 D 754476 CDS YP_006297351.1 387128746 12845325 complement(2967137..2969980) 1 NC_017857.1 PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2969980 12845325 Q7A_2929 Methylophaga nitratireducenticrescens phosphoenolpyruvate carboxylase YP_006297351.1 2967137 R 754476 CDS YP_006297352.1 387128747 12845326 complement(2969977..2971443) 1 NC_017857.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen synthase 2971443 12845326 Q7A_2930 Methylophaga nitratireducenticrescens glycogen synthase YP_006297352.1 2969977 R 754476 CDS YP_006297353.1 387128748 12845327 2971522..2972991 1 NC_017857.1 PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2972991 12845327 Q7A_2931 Methylophaga nitratireducenticrescens glucose-6-phosphate 1-dehydrogenase YP_006297353.1 2971522 D 754476 CDS YP_006297354.1 387128749 12845328 complement(2973064..2973765) 1 NC_017857.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase 2973765 12845328 Q7A_2932 Methylophaga nitratireducenticrescens phosphatidylserine decarboxylase YP_006297354.1 2973064 R 754476 CDS YP_006297355.1 387128750 12845329 2974040..2974447 1 NC_017857.1 PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 2974447 12845329 Q7A_2933 Methylophaga nitratireducenticrescens flagellar basal body-associated protein FliL YP_006297355.1 2974040 D 754476 CDS YP_006297356.1 387128751 12845330 2974497..2975006 1 NC_017857.1 PFAM: Flagellar basal body-associated protein FliL; flagellar biosynthesis protein FliL 2975006 12845330 Q7A_2934 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliL YP_006297356.1 2974497 D 754476 CDS YP_006297357.1 387128752 12845331 2975009..2976031 1 NC_017857.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliM 2976031 12845331 Q7A_2935 Methylophaga nitratireducenticrescens flagellar motor switch protein FliM YP_006297357.1 2975009 D 754476 CDS YP_006297358.1 387128753 12845332 2976028..2976486 1 NC_017857.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein FliN 2976486 12845332 Q7A_2936 Methylophaga nitratireducenticrescens flagellar motor switch protein FliN YP_006297358.1 2976028 D 754476 CDS YP_006297359.1 387128754 12845333 2976483..2976905 1 NC_017857.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biosynthesis protein FliQ 2976905 12845333 Q7A_2937 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliQ YP_006297359.1 2976483 D 754476 CDS YP_006297360.1 387128755 12845334 2976905..2977642 1 NC_017857.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthesis protein FliP 2977642 12845334 Q7A_2938 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliP YP_006297360.1 2976905 D 754476 CDS YP_006297361.1 387128756 12845335 2977645..2977914 1 NC_017857.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthesis protein FliQ 2977914 12845335 Q7A_2939 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliQ YP_006297361.1 2977645 D 754476 CDS YP_006297362.1 387128757 12845336 2977917..2978699 1 NC_017857.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthesis protein FliR 2978699 12845336 Q7A_2940 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FliR YP_006297362.1 2977917 D 754476 CDS YP_006297363.1 387128758 12845337 2978692..2979831 1 NC_017857.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthesis protein FlhB 2979831 12845337 Q7A_2941 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FlhB YP_006297363.1 2978692 D 754476 CDS YP_006297364.1 387128759 12845338 2979835..2981913 1 NC_017857.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 2981913 12845338 Q7A_2942 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FlhA YP_006297364.1 2979835 D 754476 CDS YP_006297365.1 387128760 12845339 2981929..2983131 1 NC_017857.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthesis protein FlhF 2983131 12845339 Q7A_2943 Methylophaga nitratireducenticrescens flagellar biosynthesis protein FlhF YP_006297365.1 2981929 D 754476 CDS YP_006297366.1 387128761 12845340 2983124..2983996 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; flagellar synthesis regulator FleN 2983996 12845340 Q7A_2944 Methylophaga nitratireducenticrescens flagellar synthesis regulator FleN YP_006297366.1 2983124 D 754476 CDS YP_006297367.1 387128762 12845341 2984013..2984726 1 NC_017857.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor 2984726 12845341 Q7A_2945 Methylophaga nitratireducenticrescens RNA polymerase sigma factor YP_006297367.1 2984013 D 754476 CDS YP_006297368.1 387128763 12845342 2984755..2985132 1 NC_017857.1 PFAM: Response regulator receiver domain; chemotaxis regulator 2985132 12845342 Q7A_2946 Methylophaga nitratireducenticrescens chemotaxis regulator YP_006297368.1 2984755 D 754476 CDS YP_006297369.1 387128764 12845343 2985151..2985894 1 NC_017857.1 PFAM: Chemotaxis phosphatase, CheZ; chemotaxis response - phosphatase CheZ 2985894 12845343 Q7A_2947 Methylophaga nitratireducenticrescens chemotaxis response - phosphatase CheZ YP_006297369.1 2985151 D 754476 CDS YP_006297370.1 387128765 12845344 2985907..2987892 1 NC_017857.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; signal transduction histidine kinase 2987892 12845344 Q7A_2948 Methylophaga nitratireducenticrescens signal transduction histidine kinase YP_006297370.1 2985907 D 754476 CDS YP_006297371.1 387128766 12845345 2987901..2988938 1 NC_017857.1 PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator protein-glutamate methylesterase CheB 2988938 12845345 Q7A_2949 Methylophaga nitratireducenticrescens chemotaxis response regulator protein-glutamate methylesterase CheB YP_006297371.1 2987901 D 754476 CDS YP_006297372.1 387128767 12845346 2988942..2989682 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor rotation protein MotA 2989682 12845346 Q7A_2950 Methylophaga nitratireducenticrescens flagellar motor rotation protein MotA YP_006297372.1 2988942 D 754476 CDS YP_006297373.1 387128768 12845347 2989687..2990598 1 NC_017857.1 PFAM: OmpA family; flagellar motor rotation protein MotB 2990598 12845347 Q7A_2951 Methylophaga nitratireducenticrescens flagellar motor rotation protein MotB YP_006297373.1 2989687 D 754476 CDS YP_006297374.1 387128769 12845348 2990595..2991392 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj 2991392 12845348 Q7A_2952 Methylophaga nitratireducenticrescens chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj YP_006297374.1 2990595 D 754476 CDS YP_006297375.1 387128770 12845349 2991385..2991966 1 NC_017857.1 PFAM: CheW-like domain; cheW-like protein 2991966 12845349 Q7A_2953 Methylophaga nitratireducenticrescens cheW-like protein YP_006297375.1 2991385 D 754476 CDS YP_006297376.1 387128771 12845350 2992065..2992544 1 NC_017857.1 PFAM: CheW-like domain; Positive regulator of CheA protein activity (CheW) 2992544 12845350 Q7A_2954 Methylophaga nitratireducenticrescens Positive regulator of CheA protein activity (CheW) YP_006297376.1 2992065 D 754476 CDS YP_006297377.1 387128772 12845351 2992551..2992733 1 NC_017857.1 hypothetical protein 2992733 12845351 Q7A_2955 Methylophaga nitratireducenticrescens hypothetical protein YP_006297377.1 2992551 D 754476 CDS YP_006297378.1 387128773 12845352 2992752..2993138 1 NC_017857.1 PFAM: Protein of unknown function (DUF2802); hypothetical protein 2993138 12845352 Q7A_2956 Methylophaga nitratireducenticrescens hypothetical protein YP_006297378.1 2992752 D 754476 CDS YP_006297379.1 387128774 12845354 complement(2995195..2995473) 1 NC_017857.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; flagellar protein FhlB cytoplasmic domain-containing protein 2995473 12845354 Q7A_2959 Methylophaga nitratireducenticrescens flagellar protein FhlB cytoplasmic domain-containing protein YP_006297379.1 2995195 R 754476 CDS YP_006297380.1 387128775 12845355 complement(2995470..2997053) 1 NC_017857.1 PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein FliK 2997053 12845355 Q7A_2960 Methylophaga nitratireducenticrescens flagellar hook-length control protein FliK YP_006297380.1 2995470 R 754476 CDS YP_006297381.1 387128776 12845356 2997186..2997962 1 NC_017857.1 PFAM: Pentapeptide repeats (8 copies); hypothetical protein 2997962 12845356 Q7A_2961 Methylophaga nitratireducenticrescens hypothetical protein YP_006297381.1 2997186 D 754476 CDS YP_006297382.1 387128777 12845357 complement(2997972..2998352) 1 NC_017857.1 PFAM: Protein of unknown function (DUF525); ApaG protein 2998352 12845357 Q7A_2962 Methylophaga nitratireducenticrescens ApaG protein YP_006297382.1 2997972 R 754476 CDS YP_006297383.1 387128778 12845358 complement(2998342..2999322) 1 NC_017857.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase 2999322 12845358 Q7A_2963 Methylophaga nitratireducenticrescens glucokinase YP_006297383.1 2998342 R 754476 CDS YP_006297384.1 387128779 12845359 complement(2999327..3000034) 1 NC_017857.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase 3000034 12845359 Q7A_2964 Methylophaga nitratireducenticrescens 6-phosphogluconolactonase YP_006297384.1 2999327 R 754476 CDS YP_006297385.1 387128780 12845360 3000175..3000885 1 NC_017857.1 PFAM: Protein of unknown function (DUF541); periplasmic/secreted protein 3000885 12845360 Q7A_2965 Methylophaga nitratireducenticrescens periplasmic/secreted protein YP_006297385.1 3000175 D 754476 CDS YP_006297386.1 387128781 12845361 complement(3000886..3002400) 1 NC_017857.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase biosynthetic 3002400 12845361 Q7A_2966 Methylophaga nitratireducenticrescens threonine dehydratase biosynthetic YP_006297386.1 3000886 R 754476 CDS YP_006297387.1 387128782 12845362 3002517..3003179 1 NC_017857.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase A 3003179 12845362 Q7A_2967 Methylophaga nitratireducenticrescens ribose 5-phosphate isomerase A YP_006297387.1 3002517 D 754476 CDS YP_006297388.1 387128783 12845363 3003308..3004474 1 NC_017857.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system transmembrane protein LolC 3004474 12845363 Q7A_2968 Methylophaga nitratireducenticrescens lipoprotein releasing system transmembrane protein LolC YP_006297388.1 3003308 D 754476 CDS YP_006297389.1 387128784 12845364 3004467..3005147 1 NC_017857.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; lipoprotein releasing system ATP-binding protein LolD 3005147 12845364 Q7A_2969 Methylophaga nitratireducenticrescens lipoprotein releasing system ATP-binding protein LolD YP_006297389.1 3004467 D 754476 CDS YP_006297390.1 387128785 12845365 complement(3005149..3005658) 1 NC_017857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062); hypothetical protein 3005658 12845365 Q7A_2970 Methylophaga nitratireducenticrescens hypothetical protein YP_006297390.1 3005149 R 754476 CDS YP_006297391.1 387128786 12845366 3005730..3007997 1 NC_017857.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; the metallo-beta-lactamase-like hydrolase 3007997 12845366 Q7A_2971 Methylophaga nitratireducenticrescens the metallo-beta-lactamase-like hydrolase YP_006297391.1 3005730 D 754476 CDS YP_006297392.1 387128787 12845367 3008049..3008684 1 NC_017857.1 PFAM: MotA/TolQ/ExbB proton channel family; motA/TolQ/ExbB proton channel family protein 3008684 12845367 Q7A_2972 Methylophaga nitratireducenticrescens motA/TolQ/ExbB proton channel family protein YP_006297392.1 3008049 D 754476 CDS YP_006297393.1 387128788 12845368 3008681..3009106 1 NC_017857.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3009106 12845368 Q7A_2973 Methylophaga nitratireducenticrescens biopolymer transport protein ExbD/TolR YP_006297393.1 3008681 D 754476 CDS YP_006297394.1 387128789 12845369 3009103..3010857 1 NC_017857.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; lipid A export ATP-binding/permease MsbA 3010857 12845369 Q7A_2974 Methylophaga nitratireducenticrescens lipid A export ATP-binding/permease MsbA YP_006297394.1 3009103 D 754476 CDS YP_006297395.1 387128790 12845370 3010857..3011837 1 NC_017857.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 3011837 12845370 Q7A_2975 Methylophaga nitratireducenticrescens tetraacyldisaccharide 4'-kinase YP_006297395.1 3010857 D 754476 CDS YP_006297396.1 387128791 12845371 3011838..3012017 1 NC_017857.1 PFAM: Trm112p-like protein; hypothetical protein 3012017 12845371 Q7A_2976 Methylophaga nitratireducenticrescens hypothetical protein YP_006297396.1 3011838 D 754476 CDS YP_006297397.1 387128792 12845372 3012017..3012781 1 NC_017857.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 3012781 12845372 Q7A_2977 Methylophaga nitratireducenticrescens 3-deoxy-manno-octulosonate cytidylyltransferase YP_006297397.1 3012017 D 754476 CDS YP_006297398.1 387128793 12845373 complement(3012749..3013009) 1 NC_017857.1 hypothetical protein 3013009 12845373 Q7A_2978 Methylophaga nitratireducenticrescens hypothetical protein YP_006297398.1 3012749 R 754476 CDS YP_006297399.1 387128794 12845374 complement(3013026..3015443) 1 NC_017857.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease E 3015443 12845374 Q7A_2979 Methylophaga nitratireducenticrescens ribonuclease E YP_006297399.1 3013026 R 754476 CDS YP_006297400.1 387128795 12845375 3015987..3016943 1 NC_017857.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase C 3016943 12845375 Q7A_2980 Methylophaga nitratireducenticrescens ribosomal large subunit pseudouridine synthase C YP_006297400.1 3015987 D 754476 CDS YP_006297401.1 387128796 12845376 3016943..3017605 1 NC_017857.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphoglycolate phosphatase 3017605 12845376 Q7A_2981 Methylophaga nitratireducenticrescens phosphoglycolate phosphatase YP_006297401.1 3016943 D 754476 CDS YP_006297402.1 387128797 12845377 3017649..3018632 1 NC_017857.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; periplasmic serine proteases (ClpP class) 3018632 12845377 Q7A_2982 Methylophaga nitratireducenticrescens periplasmic serine proteases (ClpP class) YP_006297402.1 3017649 D 754476 CDS YP_006297403.1 387128798 12845378 3018632..3018793 1 NC_017857.1 hypothetical protein 3018793 12845378 Q7A_2983 Methylophaga nitratireducenticrescens hypothetical protein YP_006297403.1 3018632 D 754476 CDS YP_006297404.1 387128799 12845379 3018784..3019623 1 NC_017857.1 PFAM: HDOD domain; hypothetical protein 3019623 12845379 Q7A_2984 Methylophaga nitratireducenticrescens hypothetical protein YP_006297404.1 3018784 D 754476 CDS YP_006297405.1 387128800 12845380 3019665..3020312 1 NC_017857.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 3020312 12845380 Q7A_2985 Methylophaga nitratireducenticrescens adenylate kinase YP_006297405.1 3019665 D 754476 CDS YP_006297406.1 387128801 12845381 3020325..3021179 1 NC_017857.1 PFAM: pfkB family carbohydrate kinase; Ketohexokinase 3021179 12845381 Q7A_2986 Methylophaga nitratireducenticrescens Ketohexokinase YP_006297406.1 3020325 D 754476 CDS YP_006297407.1 387128802 12845382 3021182..3021529 1 NC_017857.1 PFAM: Rieske [2Fe-2S] domain; ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase 3021529 12845382 Q7A_2987 Methylophaga nitratireducenticrescens ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase YP_006297407.1 3021182 D 754476 CDS YP_006297408.1 387128803 12845383 complement(3021518..3023518) 1 NC_017857.1 PFAM: Putative ATPase (DUF699); Domain of unknown function (DUF1726); bifunctional P-loop ATPase/acetyltransferase 3023518 12845383 Q7A_2988 Methylophaga nitratireducenticrescens bifunctional P-loop ATPase/acetyltransferase YP_006297408.1 3021518 R 754476 CDS YP_006297409.1 387128804 12845384 complement(3023564..3023767) 1 NC_017857.1 PFAM: SlyX; hypothetical protein 3023767 12845384 Q7A_2989 Methylophaga nitratireducenticrescens hypothetical protein YP_006297409.1 3023564 R 754476 CDS YP_006297410.1 387128805 12845385 complement(3023840..3027538) 1 NC_017857.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase 3027538 12845385 Q7A_2990 Methylophaga nitratireducenticrescens 5-methyltetrahydrofolate--homocysteine methyltransferase YP_006297410.1 3023840 R 754476 CDS YP_006297411.1 387128806 12845386 complement(3027749..3028498) 1 NC_017857.1 PFAM: SPFH domain / Band 7 family; stomatin/prohibitin-family membrane protease subunit 3028498 12845386 Q7A_2991 Methylophaga nitratireducenticrescens stomatin/prohibitin-family membrane protease subunit YP_006297411.1 3027749 R 754476 CDS YP_006297412.1 387128807 12845387 complement(3028501..3029841) 1 NC_017857.1 PFAM: NfeD-like; membrane-bound ClpP-class protease 3029841 12845387 Q7A_2992 Methylophaga nitratireducenticrescens membrane-bound ClpP-class protease YP_006297412.1 3028501 R 754476 CDS YP_006297413.1 387128808 12845388 3030027..3030227 1 NC_017857.1 hypothetical protein 3030227 12845388 Q7A_2993 Methylophaga nitratireducenticrescens hypothetical protein YP_006297413.1 3030027 D 754476 CDS YP_006297414.1 387128809 12845389 3030343..3031350 1 NC_017857.1 PFAM: Cytochrome P450; fatty acid alpha hydroxylase, cytochrome P450 3031350 12845389 Q7A_2994 Methylophaga nitratireducenticrescens fatty acid alpha hydroxylase, cytochrome P450 YP_006297414.1 3030343 D 754476 CDS YP_006297415.1 387128810 12845390 complement(3031355..3031918) 1 NC_017857.1 hypothetical protein 3031918 12845390 Q7A_2995 Methylophaga nitratireducenticrescens hypothetical protein YP_006297415.1 3031355 R 754476 CDS YP_006297416.1 387128811 12845391 3032220..3032438 1 NC_017857.1 hypothetical protein 3032438 12845391 Q7A_2996 Methylophaga nitratireducenticrescens hypothetical protein YP_006297416.1 3032220 D 754476 CDS YP_006297417.1 387128812 12845392 complement(3032645..3033127) 1 NC_017857.1 PFAM: Domain of unknown function (DUF2383); hypothetical protein 3033127 12845392 Q7A_2997 Methylophaga nitratireducenticrescens hypothetical protein YP_006297417.1 3032645 R 754476 CDS YP_006297418.1 387128813 12845393 complement(3033232..3033507) 1 NC_017857.1 PFAM: Domain of Unknown Function (DUF326); Ferredoxin 3033507 12845393 Q7A_2998 Methylophaga nitratireducenticrescens Ferredoxin YP_006297418.1 3033232 R 754476 CDS YP_006297419.1 387128814 12845394 complement(3033531..3033956) 1 NC_017857.1 PFAM: CBS domain; inosine-5'-monophosphate dehydrogenase protein 3033956 12845394 Q7A_2999 Methylophaga nitratireducenticrescens inosine-5'-monophosphate dehydrogenase protein YP_006297419.1 3033531 R 754476 CDS YP_006297420.1 387128815 12845395 complement(3034215..3034343) 1 NC_017857.1 hypothetical protein 3034343 12845395 Q7A_3000 Methylophaga nitratireducenticrescens hypothetical protein YP_006297420.1 3034215 R 754476 CDS YP_006297421.1 387128816 12845396 3034331..3035227 1 NC_017857.1 PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 3035227 12845396 Q7A_3001 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP reductase YP_006297421.1 3034331 D 754476 CDS YP_006297422.1 387128817 12845397 complement(3035218..3037326) 1 NC_017857.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 3037326 12845397 Q7A_3002 Methylophaga nitratireducenticrescens methyl-accepting chemotaxis sensory transducer YP_006297422.1 3035218 R 754476 CDS YP_006297423.1 387128818 12845398 3037434..3037583 1 NC_017857.1 hypothetical protein 3037583 12845398 Q7A_3003 Methylophaga nitratireducenticrescens hypothetical protein YP_006297423.1 3037434 D 754476 CDS YP_006297424.1 387128819 12845399 complement(3037602..3038072) 1 NC_017857.1 PFAM: Late embryogenesis abundant protein; lipoprotein 3038072 12845399 Q7A_3004 Methylophaga nitratireducenticrescens lipoprotein YP_006297424.1 3037602 R 754476 CDS YP_006297425.1 387128820 12845400 complement(3038215..3038481) 1 NC_017857.1 hypothetical protein 3038481 12845400 Q7A_3005 Methylophaga nitratireducenticrescens hypothetical protein YP_006297425.1 3038215 R 754476 CDS YP_006297426.1 387128821 12845401 3038480..3038599 1 NC_017857.1 hypothetical protein 3038599 12845401 Q7A_3006 Methylophaga nitratireducenticrescens hypothetical protein YP_006297426.1 3038480 D 754476 CDS YP_006297427.1 387128822 12845402 complement(3038706..3040382) 1 NC_017857.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type; 2-isopropylmalate synthase 3040382 12845402 Q7A_3007 Methylophaga nitratireducenticrescens 2-isopropylmalate synthase YP_006297427.1 3038706 R 754476 CDS YP_006297428.1 387128823 12845403 3040715..3041185 1 NC_017857.1 PFAM: MarR family; AsnC family; transcriptional regulator 3041185 12845403 Q7A_3008 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297428.1 3040715 D 754476 CDS YP_006297429.1 387128824 12845404 complement(3041209..3042081) 1 NC_017857.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; polyphosphate:nucleotide phosphotransferase 3042081 12845404 Q7A_3009 Methylophaga nitratireducenticrescens polyphosphate:nucleotide phosphotransferase YP_006297429.1 3041209 R 754476 CDS YP_006297430.1 387128825 12845405 complement(3042173..3043186) 1 NC_017857.1 PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; methyltransferase 3043186 12845405 Q7A_3010 Methylophaga nitratireducenticrescens methyltransferase YP_006297430.1 3042173 R 754476 CDS YP_006297431.1 387128826 12845406 complement(3043186..3043320) 1 NC_017857.1 hypothetical protein 3043320 12845406 Q7A_3011 Methylophaga nitratireducenticrescens hypothetical protein YP_006297431.1 3043186 R 754476 CDS YP_006297432.1 387128827 12845407 complement(3043360..3044496) 1 NC_017857.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein; hypothetical protein 3044496 12845407 Q7A_3012 Methylophaga nitratireducenticrescens hypothetical protein YP_006297432.1 3043360 R 754476 CDS YP_006297433.1 387128828 12845408 complement(3044938..3045660) 1 NC_017857.1 divalent heavy-metal cations transporter 3045660 12845408 Q7A_3013 Methylophaga nitratireducenticrescens divalent heavy-metal cations transporter YP_006297433.1 3044938 R 754476 CDS YP_006297434.1 387128829 12845409 3045885..3046832 1 NC_017857.1 streptogramin lyase 3046832 12845409 Q7A_3014 Methylophaga nitratireducenticrescens streptogramin lyase YP_006297434.1 3045885 D 754476 CDS YP_006297435.1 387128830 12845410 complement(3046913..3047512) 1 NC_017857.1 PFAM: Exopolysaccharide synthesis, ExoD; ABC transporter permease 3047512 12845410 Q7A_3015 Methylophaga nitratireducenticrescens ABC transporter permease YP_006297435.1 3046913 R 754476 CDS YP_006297436.1 387128831 12845411 complement(3047527..3048480) 1 NC_017857.1 PFAM: Sodium Bile acid symporter family; arsenical-resistance protein ACR3 3048480 12845411 Q7A_3016 Methylophaga nitratireducenticrescens arsenical-resistance protein ACR3 YP_006297436.1 3047527 R 754476 CDS YP_006297437.1 387128832 12845412 3048692..3048949 1 NC_017857.1 hypothetical protein 3048949 12845412 Q7A_3017 Methylophaga nitratireducenticrescens hypothetical protein YP_006297437.1 3048692 D 754476 CDS YP_006297438.1 387128833 12845413 complement(3048984..3049871) 1 NC_017857.1 PFAM: Mechanosensitive ion channel; hypothetical protein 3049871 12845413 Q7A_3018 Methylophaga nitratireducenticrescens hypothetical protein YP_006297438.1 3048984 R 754476 CDS YP_006297439.1 387128834 12845414 3050481..3051890 1 NC_017857.1 PFAM: PhoH-like protein; ATPase related to phosphate starvation-inducible protein PhoH 3051890 12845414 Q7A_3019 Methylophaga nitratireducenticrescens ATPase related to phosphate starvation-inducible protein PhoH YP_006297439.1 3050481 D 754476 CDS YP_006297440.1 387128835 12845415 3051999..3052625 1 NC_017857.1 PFAM: PilZ domain; PilZ domain-containing protein 3052625 12845415 Q7A_3020 Methylophaga nitratireducenticrescens PilZ domain-containing protein YP_006297440.1 3051999 D 754476 CDS YP_006297441.1 387128836 12845416 3052763..3053371 1 NC_017857.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase 3053371 12845416 Q7A_3021 Methylophaga nitratireducenticrescens glutathione S-transferase YP_006297441.1 3052763 D 754476 CDS YP_006297442.1 387128837 12845417 complement(3053375..3054031) 1 NC_017857.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthetase 3054031 12845417 Q7A_3022 Methylophaga nitratireducenticrescens dethiobiotin synthetase YP_006297442.1 3053375 R 754476 CDS YP_006297443.1 387128838 12845418 complement(3054031..3054930) 1 NC_017857.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; Biotin synthesis protein bioC 3054930 12845418 Q7A_3023 Methylophaga nitratireducenticrescens Biotin synthesis protein bioC YP_006297443.1 3054031 R 754476 CDS YP_006297444.1 387128839 12845419 complement(3054923..3055681) 1 NC_017857.1 TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH; Biotin synthesis protein bioH 3055681 12845419 Q7A_3024 Methylophaga nitratireducenticrescens Biotin synthesis protein bioH YP_006297444.1 3054923 R 754476 CDS YP_006297445.1 387128840 12845420 complement(3055671..3056843) 1 NC_017857.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 3056843 12845420 Q7A_3025 Methylophaga nitratireducenticrescens 8-amino-7-oxononanoate synthase YP_006297445.1 3055671 R 754476 CDS YP_006297446.1 387128841 12845421 complement(3056953..3057966) 1 NC_017857.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase; biotin synthase 3057966 12845421 Q7A_3026 Methylophaga nitratireducenticrescens biotin synthase YP_006297446.1 3056953 R 754476 CDS YP_006297447.1 387128842 12845422 3058000..3058725 1 NC_017857.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; Competence protein F-like protein 3058725 12845422 Q7A_3027 Methylophaga nitratireducenticrescens Competence protein F-like protein YP_006297447.1 3058000 D 754476 CDS YP_006297448.1 387128843 12845423 3058763..3059836 1 NC_017857.1 PFAM: Protein of unknown function, DUF484; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 3059836 12845423 Q7A_3028 Methylophaga nitratireducenticrescens diguanylate cyclase YP_006297448.1 3058763 D 754476 CDS YP_006297449.1 387128844 12845424 3059886..3061376 1 NC_017857.1 PFAM: Protein of unknown function (DUF1538); hypothetical protein 3061376 12845424 Q7A_3029 Methylophaga nitratireducenticrescens hypothetical protein YP_006297449.1 3059886 D 754476 CDS YP_006297450.1 387128845 12845425 3061373..3061723 1 NC_017857.1 nitrogen regulatory protein P-II 3061723 12845425 Q7A_3030 Methylophaga nitratireducenticrescens nitrogen regulatory protein P-II YP_006297450.1 3061373 D 754476 CDS YP_006297451.1 387128846 12845426 3061742..3062131 1 NC_017857.1 PFAM: CBS domain; signal-transduction protein 3062131 12845426 Q7A_3031 Methylophaga nitratireducenticrescens signal-transduction protein YP_006297451.1 3061742 D 754476 CDS YP_006297452.1 387128847 12845427 complement(3062135..3062968) 1 NC_017857.1 PFAM: Staphylococcal nuclease homologue; nuclease SNase-like protein 3062968 12845427 Q7A_3032 Methylophaga nitratireducenticrescens nuclease SNase-like protein YP_006297452.1 3062135 R 754476 CDS YP_006297453.1 387128848 12845428 complement(3062970..3063836) 1 NC_017857.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial; 4-hydroxybenzoate polyprenyltransferase 3063836 12845428 Q7A_3033 Methylophaga nitratireducenticrescens 4-hydroxybenzoate polyprenyltransferase YP_006297453.1 3062970 R 754476 CDS YP_006297454.1 387128849 12845429 complement(3063836..3064387) 1 NC_017857.1 PFAM: Chorismate lyase; chorismate--pyruvate lyase 3064387 12845429 Q7A_3034 Methylophaga nitratireducenticrescens chorismate--pyruvate lyase YP_006297454.1 3063836 R 754476 CDS YP_006297455.1 387128850 12845430 complement(3064401..3066482) 1 NC_017857.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 3066482 12845430 Q7A_3035 Methylophaga nitratireducenticrescens ATP-dependent DNA helicase RecG YP_006297455.1 3064401 R 754476 CDS YP_006297456.1 387128851 12845431 complement(3066509..3066895) 1 NC_017857.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP 3066895 12845431 Q7A_3036 Methylophaga nitratireducenticrescens endoribonuclease L-PSP YP_006297456.1 3066509 R 754476 CDS YP_006297457.1 387128852 12845432 complement(3066940..3069099) 1 NC_017857.1 PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 3069099 12845432 Q7A_3037 Methylophaga nitratireducenticrescens GTP pyrophosphokinase , (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_006297457.1 3066940 R 754476 CDS YP_006297458.1 387128853 12845433 complement(3069106..3069366) 1 NC_017857.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 3069366 12845433 Q7A_3038 Methylophaga nitratireducenticrescens DNA-directed RNA polymerase subunit omega YP_006297458.1 3069106 R 754476 CDS YP_006297459.1 387128854 12845434 complement(3069417..3070028) 1 NC_017857.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 3070028 12845434 Q7A_3039 Methylophaga nitratireducenticrescens guanylate kinase YP_006297459.1 3069417 R 754476 CDS YP_006297460.1 387128855 12845435 3070268..3071308 1 NC_017857.1 PFAM: Bacterial extracellular solute-binding protein; Ferric iron ABC transporter, iron-binding protein 3071308 12845435 Q7A_3040 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, iron-binding protein YP_006297460.1 3070268 D 754476 CDS YP_006297461.1 387128856 12845436 3071433..3073025 1 NC_017857.1 PFAM: Binding-protein-dependent transport system inner membrane component; Ferric iron ABC transporter, permease protein 3073025 12845436 Q7A_3041 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, permease protein YP_006297461.1 3071433 D 754476 CDS YP_006297462.1 387128857 12845437 3073033..3074085 1 NC_017857.1 PFAM: ABC transporter; TOBE domain; Ferric iron ABC transporter, ATP-binding protein 3074085 12845437 Q7A_3042 Methylophaga nitratireducenticrescens Ferric iron ABC transporter, ATP-binding protein YP_006297462.1 3073033 D 754476 CDS YP_006297463.1 387128858 12845438 3074294..3074839 1 NC_017857.1 hypothetical protein 3074839 12845438 Q7A_3043 Methylophaga nitratireducenticrescens hypothetical protein YP_006297463.1 3074294 D 754476 CDS YP_006297464.1 387128859 12845439 3074971..3075111 1 NC_017857.1 hypothetical protein 3075111 12845439 Q7A_3044 Methylophaga nitratireducenticrescens hypothetical protein YP_006297464.1 3074971 D 754476 CDS YP_006297465.1 387128860 12845440 complement(3075477..3077867) 1 NC_017857.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; Type III restriction enzyme, res subunit; helicase 3077867 12845440 Q7A_3045 Methylophaga nitratireducenticrescens helicase YP_006297465.1 3075477 R 754476 CDS YP_006297466.1 387128861 12845441 complement(3077967..3078197) 1 NC_017857.1 hypothetical protein 3078197 12845441 Q7A_3046 Methylophaga nitratireducenticrescens hypothetical protein YP_006297466.1 3077967 R 754476 CDS YP_006297467.1 387128862 12845442 3078561..3078695 1 NC_017857.1 hypothetical protein 3078695 12845442 Q7A_3047 Methylophaga nitratireducenticrescens hypothetical protein YP_006297467.1 3078561 D 754476 CDS YP_006297468.1 387128863 12845444 3080041..3080181 1 NC_017857.1 hypothetical protein 3080181 12845444 Q7A_3050 Methylophaga nitratireducenticrescens hypothetical protein YP_006297468.1 3080041 D 754476 CDS YP_006297469.1 387128864 12845445 3080194..3081198 1 NC_017857.1 PFAM: SEC-C motif; hypothetical protein 3081198 12845445 Q7A_3051 Methylophaga nitratireducenticrescens hypothetical protein YP_006297469.1 3080194 D 754476 CDS YP_006297470.1 387128865 12845446 3081371..3082327 1 NC_017857.1 hypothetical protein 3082327 12845446 Q7A_3052 Methylophaga nitratireducenticrescens hypothetical protein YP_006297470.1 3081371 D 754476 CDS YP_006297471.1 387128866 12845447 complement(3082476..3083789) 1 NC_017857.1 ATPase (AAA+ superfamily) 3083789 12845447 Q7A_3053 Methylophaga nitratireducenticrescens ATPase (AAA+ superfamily) YP_006297471.1 3082476 R 754476 CDS YP_006297472.1 387128867 12845448 complement(3084003..3084227) 1 NC_017857.1 transcriptional regulator 3084227 12845448 Q7A_3054 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297472.1 3084003 R 754476 CDS YP_006297473.1 387128868 12845449 complement(3084281..3084574) 1 NC_017857.1 PFAM: Transposase DDE domain; IS4 family transposase 3084574 12845449 Q7A_3055 Methylophaga nitratireducenticrescens IS4 family transposase YP_006297473.1 3084281 R 754476 CDS YP_006297474.1 387128869 12845450 complement(3084571..3085044) 1 NC_017857.1 transposase 3085044 12845450 Q7A_3056 Methylophaga nitratireducenticrescens transposase YP_006297474.1 3084571 R 754476 CDS YP_006297475.1 387128870 12845451 complement(3085438..3086289) 1 NC_017857.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; protein YicC 3086289 12845451 Q7A_3057 Methylophaga nitratireducenticrescens protein YicC YP_006297475.1 3085438 R 754476 CDS YP_006297476.1 387128871 12845452 3086417..3087133 1 NC_017857.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; ribonuclease PH 3087133 12845452 Q7A_3058 Methylophaga nitratireducenticrescens ribonuclease PH YP_006297476.1 3086417 D 754476 CDS YP_006297477.1 387128872 12845453 3087133..3087738 1 NC_017857.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; nucleoside 5-triphosphatase RdgB 3087738 12845453 Q7A_3059 Methylophaga nitratireducenticrescens nucleoside 5-triphosphatase RdgB YP_006297477.1 3087133 D 754476 CDS YP_006297478.1 387128873 12845454 3087846..3089006 1 NC_017857.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase-like protein 3089006 12845454 Q7A_3060 Methylophaga nitratireducenticrescens coproporphyrinogen III oxidase-like protein YP_006297478.1 3087846 D 754476 CDS YP_006297479.1 387128874 12845455 3089041..3089337 1 NC_017857.1 hypothetical protein 3089337 12845455 Q7A_3061 Methylophaga nitratireducenticrescens hypothetical protein YP_006297479.1 3089041 D 754476 CDS YP_006297480.1 387128875 12845456 complement(3089352..3089852) 1 NC_017857.1 hypothetical protein 3089852 12845456 Q7A_3062 Methylophaga nitratireducenticrescens hypothetical protein YP_006297480.1 3089352 R 754476 CDS YP_006297481.1 387128876 12845457 complement(3089855..3091000) 1 NC_017857.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase 3091000 12845457 Q7A_3063 Methylophaga nitratireducenticrescens threonine synthase YP_006297481.1 3089855 R 754476 CDS YP_006297482.1 387128877 12845458 complement(3091036..3092346) 1 NC_017857.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain; Homoserine dehydrogenase 3092346 12845458 Q7A_3064 Methylophaga nitratireducenticrescens Homoserine dehydrogenase YP_006297482.1 3091036 R 754476 CDS YP_006297483.1 387128878 12845459 complement(3092356..3093471) 1 NC_017857.1 PFAM: Aminotransferase class I and II; Aspartate aminotransferase 3093471 12845459 Q7A_3065 Methylophaga nitratireducenticrescens Aspartate aminotransferase YP_006297483.1 3092356 R 754476 CDS YP_006297484.1 387128879 12845460 3093495..3093614 1 NC_017857.1 hypothetical protein 3093614 12845460 Q7A_3066 Methylophaga nitratireducenticrescens hypothetical protein YP_006297484.1 3093495 D 754476 CDS YP_006297485.1 387128880 12845461 3093629..3094471 1 NC_017857.1 PFAM: HDOD domain; signal transduction protein 3094471 12845461 Q7A_3067 Methylophaga nitratireducenticrescens signal transduction protein YP_006297485.1 3093629 D 754476 CDS YP_006297486.1 387128881 12845462 complement(3094546..3094860) 1 NC_017857.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated DNA-protein cysteine methyltransferase 3094860 12845462 Q7A_3068 Methylophaga nitratireducenticrescens methylated DNA-protein cysteine methyltransferase YP_006297486.1 3094546 R 754476 CDS YP_006297487.1 387128882 12845463 complement(3094953..3095789) 1 NC_017857.1 PFAM: Protein of unknown function (DUF519); hypothetical protein 3095789 12845463 Q7A_3069 Methylophaga nitratireducenticrescens hypothetical protein YP_006297487.1 3094953 R 754476 CDS YP_006297488.1 387128883 12845464 complement(3096022..3097125) 1 NC_017857.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family; xenobiotic reductase A 3097125 12845464 Q7A_3070 Methylophaga nitratireducenticrescens xenobiotic reductase A YP_006297488.1 3096022 R 754476 CDS YP_006297489.1 387128884 12845465 complement(3097205..3097996) 1 NC_017857.1 PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 3097996 12845465 Q7A_3071 Methylophaga nitratireducenticrescens 3-oxoacyl-ACP reductase YP_006297489.1 3097205 R 754476 CDS YP_006297490.1 387128885 12845466 complement(3098045..3098845) 1 NC_017857.1 PFAM: AhpC/TSA family; thioredoxin 3098845 12845466 Q7A_3072 Methylophaga nitratireducenticrescens thioredoxin YP_006297490.1 3098045 R 754476 CDS YP_006297491.1 387128886 12845467 complement(3098845..3099606) 1 NC_017857.1 thiol:disulfide interchange protein DsbG precursor 3099606 12845467 Q7A_3073 Methylophaga nitratireducenticrescens thiol:disulfide interchange protein DsbG precursor YP_006297491.1 3098845 R 754476 CDS YP_006297492.1 387128887 12845468 3099808..3100998 1 NC_017857.1 PFAM: Protein of unknown function (DUF1228); Major Facilitator Superfamily; transporter 3100998 12845468 Q7A_3074 Methylophaga nitratireducenticrescens transporter YP_006297492.1 3099808 D 754476 CDS YP_006297493.1 387128888 12845469 complement(3101035..3101364) 1 NC_017857.1 hypothetical protein 3101364 12845469 Q7A_3075 Methylophaga nitratireducenticrescens hypothetical protein YP_006297493.1 3101035 R 754476 CDS YP_006297494.1 387128889 12845470 complement(3101403..3102152) 1 NC_017857.1 hypothetical protein 3102152 12845470 Q7A_3076 Methylophaga nitratireducenticrescens hypothetical protein YP_006297494.1 3101403 R 754476 CDS YP_006297495.1 387128890 12845471 3102560..3102688 1 NC_017857.1 hypothetical protein 3102688 12845471 Q7A_3077 Methylophaga nitratireducenticrescens hypothetical protein YP_006297495.1 3102560 D 754476 CDS YP_006297496.1 387128891 12845472 complement(3102824..3103189) 1 NC_017857.1 hypothetical protein 3103189 12845472 Q7A_3078 Methylophaga nitratireducenticrescens hypothetical protein YP_006297496.1 3102824 R 754476 CDS YP_006297497.1 387128892 12845473 complement(3103315..3104511) 1 NC_017857.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; NAD(FAD)-utilizing dehydrogenase 3104511 12845473 Q7A_3079 Methylophaga nitratireducenticrescens NAD(FAD)-utilizing dehydrogenase YP_006297497.1 3103315 R 754476 CDS YP_006297498.1 387128893 12845474 complement(3104581..3105243) 1 NC_017857.1 toluene tolerance protein Ttg8 3105243 12845474 Q7A_3080 Methylophaga nitratireducenticrescens toluene tolerance protein Ttg8 YP_006297498.1 3104581 R 754476 CDS YP_006297499.1 387128894 12845475 complement(3105397..3105960) 1 NC_017857.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; Farnesyl cysteine carboxyl-methyltransferase 3105960 12845475 Q7A_3081 Methylophaga nitratireducenticrescens Farnesyl cysteine carboxyl-methyltransferase YP_006297499.1 3105397 R 754476 CDS YP_006297500.1 387128895 12845476 complement(3106225..3106347) 1 NC_017857.1 hypothetical protein 3106347 12845476 Q7A_3082 Methylophaga nitratireducenticrescens hypothetical protein YP_006297500.1 3106225 R 754476 CDS YP_006297501.1 387128896 12845477 3106394..3106747 1 NC_017857.1 PFAM: NlpC/P60 family; lipoprotein 3106747 12845477 Q7A_3083 Methylophaga nitratireducenticrescens lipoprotein YP_006297501.1 3106394 D 754476 CDS YP_006297502.1 387128897 12845478 3106899..3107843 1 NC_017857.1 hypothetical protein 3107843 12845478 Q7A_3084 Methylophaga nitratireducenticrescens hypothetical protein YP_006297502.1 3106899 D 754476 CDS YP_006297503.1 387128898 12845479 complement(3107949..3110003) 1 NC_017857.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Erythromycin esterase; TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 3110003 12845479 Q7A_3085 Methylophaga nitratireducenticrescens protein-L-isoaspartate O-methyltransferase YP_006297503.1 3107949 R 754476 CDS YP_006297504.1 387128899 12845480 3110533..3110832 1 NC_017857.1 PFAM: Protein of unknown function (DUF3617); hypothetical protein 3110832 12845480 Q7A_3086 Methylophaga nitratireducenticrescens hypothetical protein YP_006297504.1 3110533 D 754476 CDS YP_006297505.1 387128900 12845481 3110889..3111314 1 NC_017857.1 PFAM: MAPEG family; hypothetical protein 3111314 12845481 Q7A_3087 Methylophaga nitratireducenticrescens hypothetical protein YP_006297505.1 3110889 D 754476 CDS YP_006297506.1 387128901 12845482 3111319..3111855 1 NC_017857.1 PFAM: Bacterial transferase hexapeptide (three repeats); carbonic anhydrase 3111855 12845482 Q7A_3088 Methylophaga nitratireducenticrescens carbonic anhydrase YP_006297506.1 3111319 D 754476 CDS YP_006297507.1 387128902 12845483 complement(3111852..3112697) 1 NC_017857.1 PFAM: HDOD domain; hypothetical protein 3112697 12845483 Q7A_3089 Methylophaga nitratireducenticrescens hypothetical protein YP_006297507.1 3111852 R 754476 CDS YP_006297508.1 387128903 12845484 3113121..3114332 1 NC_017857.1 PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein 3114332 12845484 Q7A_3090 Methylophaga nitratireducenticrescens hypothetical protein YP_006297508.1 3113121 D 754476 CDS YP_006297509.1 387128904 12845485 complement(3114367..3114660) 1 NC_017857.1 PFAM: Transposase DDE domain; transposase 3114660 12845485 Q7A_3091 Methylophaga nitratireducenticrescens transposase YP_006297509.1 3114367 R 754476 CDS YP_006297510.1 387128905 12845486 complement(3114657..3115130) 1 NC_017857.1 transposase 3115130 12845486 Q7A_3092 Methylophaga nitratireducenticrescens transposase YP_006297510.1 3114657 R 754476 CDS YP_006297511.1 387128906 12845487 complement(3115228..3115989) 1 NC_017857.1 PFAM: ABC-2 type transporter; multidrug ABC transporter permease 3115989 12845487 Q7A_3093 Methylophaga nitratireducenticrescens multidrug ABC transporter permease YP_006297511.1 3115228 R 754476 CDS YP_006297512.1 387128907 12845488 complement(3115986..3116915) 1 NC_017857.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 3116915 12845488 Q7A_3094 Methylophaga nitratireducenticrescens multidrug ABC transporter ATPase YP_006297512.1 3115986 R 754476 CDS YP_006297513.1 387128908 12845489 complement(3117107..3117907) 1 NC_017857.1 hypothetical protein 3117907 12845489 Q7A_3095 Methylophaga nitratireducenticrescens hypothetical protein YP_006297513.1 3117107 R 754476 CDS YP_006297514.1 387128909 12845490 complement(3118090..3118458) 1 NC_017857.1 hypothetical protein 3118458 12845490 Q7A_3096 Methylophaga nitratireducenticrescens hypothetical protein YP_006297514.1 3118090 R 754476 CDS YP_006297515.1 387128910 12845491 3118533..3119417 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 3119417 12845491 Q7A_3097 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006297515.1 3118533 D 754476 CDS YP_006297516.1 387128911 12845492 complement(3119746..3120054) 1 NC_017857.1 PFAM: Protein of unknown function (DUF3144); hypothetical protein 3120054 12845492 Q7A_3098 Methylophaga nitratireducenticrescens hypothetical protein YP_006297516.1 3119746 R 754476 CDS YP_006297517.1 387128912 12845493 complement(3120051..3120173) 1 NC_017857.1 hypothetical protein 3120173 12845493 Q7A_3099 Methylophaga nitratireducenticrescens hypothetical protein YP_006297517.1 3120051 R 754476 CDS YP_006297518.1 387128913 12845494 3120301..3121530 1 NC_017857.1 PFAM: Amino acid permease; amino acid transporter 3121530 12845494 Q7A_3100 Methylophaga nitratireducenticrescens amino acid transporter YP_006297518.1 3120301 D 754476 CDS YP_006297519.1 387128914 12845495 3121648..3122418 1 NC_017857.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; transcriptional regulator 3122418 12845495 Q7A_3101 Methylophaga nitratireducenticrescens transcriptional regulator YP_006297519.1 3121648 D 754476 CDS YP_006297520.1 387128915 12845497 complement(3123477..3124739) 1 NC_017857.1 PFAM: Phosphotransferase enzyme family; homoserine kinase type II 3124739 12845497 Q7A_3105 Methylophaga nitratireducenticrescens homoserine kinase type II YP_006297520.1 3123477 R 754476 CDS YP_006297521.1 387128916 12845498 3124944..3125843 1 NC_017857.1 PFAM: Transposase DDE domain; transposase, IS982 family 3125843 12845498 Q7A_3106 Methylophaga nitratireducenticrescens transposase, IS982 family YP_006297521.1 3124944 D 754476 CDS YP_006297522.1 387128917 12845499 complement(3125851..3126543) 1 NC_017857.1 PFAM: Integrase core domain; integrase, catalytic region 3126543 12845499 Q7A_3107 Methylophaga nitratireducenticrescens integrase, catalytic region YP_006297522.1 3125851 R 754476 CDS YP_006297523.1 387128918 12845500 complement(3126549..3126938) 1 NC_017857.1 PFAM: Transposase; transposase IS3/IS911 3126938 12845500 Q7A_3108 Methylophaga nitratireducenticrescens transposase IS3/IS911 YP_006297523.1 3126549 R 754476 CDS YP_006297524.1 387128919 12845501 3127658..3128971 1 NC_017857.1 PFAM: Peptidase family U32; protease 3128971 12845501 Q7A_3109 Methylophaga nitratireducenticrescens protease YP_006297524.1 3127658 D 754476 CDS YP_006297525.1 387128920 12845502 complement(3128997..3129290) 1 NC_017857.1 PFAM: Transposase DDE domain; IS4 family transposase 3129290 12845502 Q7A_3110 Methylophaga nitratireducenticrescens IS4 family transposase YP_006297525.1 3128997 R 754476 CDS YP_006297526.1 387128921 12845503 complement(3129287..3129760) 1 NC_017857.1 transposase 3129760 12845503 Q7A_3111 Methylophaga nitratireducenticrescens transposase YP_006297526.1 3129287 R 754476 CDS YP_006297527.1 387128922 12845504 complement(3129930..3130115) 1 NC_017857.1 hypothetical protein 3130115 12845504 Q7A_3112 Methylophaga nitratireducenticrescens hypothetical protein YP_006297527.1 3129930 R 754476 CDS YP_006297528.1 387128923 12845505 complement(3130397..3130540) 1 NC_017857.1 hypothetical protein 3130540 12845505 Q7A_3113 Methylophaga nitratireducenticrescens hypothetical protein YP_006297528.1 3130397 R 754476 CDS YP_006297529.1 387128924 12845506 complement(3131162..3131299) 1 NC_017857.1 hypothetical protein 3131299 12845506 Q7A_3114 Methylophaga nitratireducenticrescens hypothetical protein YP_006297529.1 3131162 R 754476 CDS