-- dump date 20240506_001032 -- class Genbank::Contig -- table contig_comment -- id comment NC_015216.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002551.1.REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso LiuREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, HostREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, LithotrophREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10 Pseudo Genes (incomplete) :: 5 of 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10 Pseudo Genes (incomplete) :: 5 of 10 Pseudo Genes (internal stop) :: 4 of 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10 Pseudo Genes (incomplete) :: 5 of 10 Pseudo Genes (internal stop) :: 4 of 10 Pseudo Genes (multiple problems) :: 3 of 10REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10 Pseudo Genes (incomplete) :: 5 of 10 Pseudo Genes (internal stop) :: 4 of 10 Pseudo Genes (multiple problems) :: 3 of 10 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002551.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091580 Source DNA and organism available from Wen-Tso Liu (wtliu@illinois.edu) Contacts: Wen-Tso Liu (wtliu@illinois.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Methanobacterium sp. AL-21 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water, Host num_replicons :: 1 ref_biomaterial :: Missing biotic_relationship :: Free living trophic_level :: Lithotroph, Lithotroph rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07795 Funding Program :: DOE-CSP 2010 Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 00:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,568 CDSs (total) :: 2,517 Genes (coding) :: 2,507 CDSs (with protein) :: 2,507 Genes (RNA) :: 51 rRNAs :: 3, 2, 2 (5S, 16S, 23S) complete rRNAs :: 3, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 5 of 10 Pseudo Genes (incomplete) :: 5 of 10 Pseudo Genes (internal stop) :: 4 of 10 Pseudo Genes (multiple problems) :: 3 of 10 ##Genome-Annotation-Data-END## COMPLETENESS: full length.