-- dump date 20140619_134808 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 458233000001 SEQ_END SEQ_END NC_011995.1 15667 15667 DR NC_011995.1; contig end 15667..15667 Macrococcus caseolyticus JCSC5402 458233000002 SEQ_END SEQ_END NC_011996.1 80545 80545 DR NC_011996.1; contig end 80545..80545 Macrococcus caseolyticus JCSC5402 458233000003 SEQ_END SEQ_END NC_011997.1 2131 2131 DR NC_011997.1; contig end 2131..2131 Macrococcus caseolyticus JCSC5402 458233000004 SEQ_END SEQ_END NC_011998.1 3417 3417 DR NC_011998.1; contig end 3417..3417 Macrococcus caseolyticus JCSC5402 458233000005 SEQ_END SEQ_END NC_011999.1 2102324 2102324 DR NC_011999.1; contig end 2102324..2102324 Macrococcus caseolyticus JCSC5402 458233000006 SEQ_END SEQ_END NC_012000.1 4398 4398 DR NC_012000.1; contig end 4398..4398 Macrococcus caseolyticus JCSC5402 458233000007 SEQ_END SEQ_END NC_012001.1 4226 4226 DR NC_012001.1; contig end 4226..4226 Macrococcus caseolyticus JCSC5402 458233000008 SEQ_END SEQ_END NC_012002.1 4061 4061 DR NC_012002.1; contig end 4061..4061 Macrococcus caseolyticus JCSC5402 458233000009 SEQ_END SEQ_END NC_012003.1 2968 2968 DR NC_012003.1; contig end 2968..2968 Macrococcus caseolyticus JCSC5402 YP_002559318.1 CDS MCCL_plsA0001 NC_011995.1 598 993 R similar to mobilization protein; hypothetical protein complement(598..993) Macrococcus caseolyticus JCSC5402 7385653 YP_002559319.1 CDS MCCL_plsA0002 NC_011995.1 1561 1932 R no similarity; hypothetical protein complement(1561..1932) Macrococcus caseolyticus JCSC5402 7385640 YP_002559320.1 CDS MCCL_plsA0003 NC_011995.1 2545 3354 D similar to functionally unknown protein; hypothetical protein 2545..3354 Macrococcus caseolyticus JCSC5402 7385641 YP_002559321.1 CDS MCCL_plsA0004 NC_011995.1 3396 3962 R phage integrase family; site-specific recombinase complement(3396..3962) Macrococcus caseolyticus JCSC5402 7385642 YP_002559322.1 CDS MCCL_plsA0005 NC_011995.1 4101 4610 R similar to functionally unknown protein; hypothetical protein complement(4101..4610) Macrococcus caseolyticus JCSC5402 7385643 YP_002559323.1 CDS MCCL_plsA0006 NC_011995.1 4629 5891 R similar to permease protein; hypothetical protein complement(4629..5891) Macrococcus caseolyticus JCSC5402 7385644 YP_002559324.1 CDS MCCL_plsA0007 NC_011995.1 6222 7169 R similar to radical SAM domain protein; hypothetical protein complement(6222..7169) Macrococcus caseolyticus JCSC5402 7385645 YP_002559325.1 CDS MCCL_plsA0008 NC_011995.1 7150 8364 R similar to molybdenum cofactor biosynthesis protein A; hypothetical protein complement(7150..8364) Macrococcus caseolyticus JCSC5402 7385646 YP_002559326.1 CDS MCCL_plsA0009 NC_011995.1 8366 9448 R similar to bacteriocin adenylyltransferase; hypothetical protein complement(8366..9448) Macrococcus caseolyticus JCSC5402 7385647 YP_002559327.1 CDS MCCL_plsA0010 NC_011995.1 9938 10780 R similar to transcriptional regulator, XRE family; hypothetical protein complement(9938..10780) Macrococcus caseolyticus JCSC5402 7385648 YP_002559328.1 CDS MCCL_plsA0011 NC_011995.1 11007 11798 R plasmid replication-associated protein complement(11007..11798) Macrococcus caseolyticus JCSC5402 7385649 YP_002559329.1 CDS MCCL_plsA0012 NC_011995.1 12284 13783 D plasmid replication protein 12284..13783 Macrococcus caseolyticus JCSC5402 7385650 YP_002559330.1 CDS MCCL_plsA0013 NC_011995.1 14377 14997 R no similarity; hypothetical protein complement(14377..14997) Macrococcus caseolyticus JCSC5402 7385651 YP_002559331.1 CDS MCCL_plsA0014 NC_011995.1 14999 15514 R no similarity; hypothetical protein complement(14999..15514) Macrococcus caseolyticus JCSC5402 7385652 YP_002559332.1 CDS MCCL_plsB0001 NC_011996.1 183 1748 D no similarity; hypothetical protein 183..1748 Macrococcus caseolyticus JCSC5402 7385723 YP_002559333.1 CDS MCCL_plsB0002 NC_011996.1 1765 4698 D similar to functionally unknown protein; hypothetical protein 1765..4698 Macrococcus caseolyticus JCSC5402 7385655 YP_002559334.1 CDS MCCL_plsB0003 NC_011996.1 5205 5537 D similar to functionally unknown protein; hypothetical protein 5205..5537 Macrococcus caseolyticus JCSC5402 7385656 YP_002559335.1 CDS MCCL_plsB0004 NC_011996.1 5541 6128 D similar to ORF10 of B. anthracis plasmid pXO2; hypothetical protein 5541..6128 Macrococcus caseolyticus JCSC5402 7385657 YP_002559336.1 CDS MCCL_plsB0005 NC_011996.1 6231 8204 D similar to ORF9 of B. anthracis plasmid pXO2; hypothetical protein 6231..8204 Macrococcus caseolyticus JCSC5402 7385658 YP_002559337.1 CDS MCCL_plsB0006 NC_011996.1 8259 9410 D similar to functionally unknown protein; hypothetical protein 8259..9410 Macrococcus caseolyticus JCSC5402 7385659 YP_002559338.1 CDS MCCL_plsB0007 NC_011996.1 9428 10102 D no similarity; hypothetical protein 9428..10102 Macrococcus caseolyticus JCSC5402 7385660 YP_002559339.1 CDS MCCL_plsB0008 NC_011996.1 10124 10966 D similar to replication-associated protein; hypothetical protein 10124..10966 Macrococcus caseolyticus JCSC5402 7385661 YP_002559340.1 CDS MCCL_plsB0009 NC_011996.1 11579 11929 D similar to functionally unknown protein; hypothetical protein 11579..11929 Macrococcus caseolyticus JCSC5402 7385662 YP_002559341.1 CDS MCCL_plsB0010 NC_011996.1 11947 13362 D similar to ORF84 of B. anthracis plasmid pXO2; hypothetical protein 11947..13362 Macrococcus caseolyticus JCSC5402 7385663 YP_002559342.1 CDS MCCL_plsB0011 NC_011996.1 13422 13715 D no similarity; hypothetical protein 13422..13715 Macrococcus caseolyticus JCSC5402 7385664 YP_002559343.1 CDS MCCL_plsB0012 NC_011996.1 13939 15429 D similar to functionally unknown protein; hypothetical protein 13939..15429 Macrococcus caseolyticus JCSC5402 7385665 YP_002559344.1 CDS MCCL_plsB0013 NC_011996.1 15486 17621 D similar to DNA topoisomerase III TopB; hypothetical protein 15486..17621 Macrococcus caseolyticus JCSC5402 7385666 YP_002559345.1 CDS MCCL_plsB0014 NC_011996.1 17670 18110 D similar to functionally unknown protein; hypothetical protein 17670..18110 Macrococcus caseolyticus JCSC5402 7385667 YP_002559346.1 CDS MCCL_plsB0015 NC_011996.1 18257 19555 D similar to functionally unknown protein; hypothetical protein 18257..19555 Macrococcus caseolyticus JCSC5402 7385668 YP_002559347.1 CDS MCCL_plsB0016 NC_011996.1 19552 20037 D similar to 5-methylcytosine-specific restriction enzyme MRR; hypothetical protein 19552..20037 Macrococcus caseolyticus JCSC5402 7385669 YP_002559348.1 CDS MCCL_plsB0017 NC_011996.1 20071 20394 D no similarity; hypothetical protein 20071..20394 Macrococcus caseolyticus JCSC5402 7385670 YP_002559349.1 CDS MCCL_plsB0018 NC_011996.1 20894 21646 D similar to sortase; hypothetical protein 20894..21646 Macrococcus caseolyticus JCSC5402 7385671 YP_002559350.1 CDS tnp NC_011996.1 21892 22644 R transposase complement(21892..22644) Macrococcus caseolyticus JCSC5402 7385672 YP_002559351.1 CDS tnp NC_011996.1 22740 23021 R transposase complement(22740..23021) Macrococcus caseolyticus JCSC5402 7385716 YP_002559352.1 CDS MCCL_plsB0021 NC_011996.1 23327 23779 R similar to methicillin-resistance regulatory protein MecI; hypothetical protein complement(23327..23779) Macrococcus caseolyticus JCSC5402 7385717 YP_002559353.1 CDS MCCL_plsB0022 NC_011996.1 23721 25424 R similar to methicillin resistance protein sensor transducer MecR1; hypothetical protein complement(23721..25424) Macrococcus caseolyticus JCSC5402 7385673 YP_002559354.1 CDS MCCL_plsB0023 NC_011996.1 25508 27532 D penicillin-binding protein 2' homolog 25508..27532 Macrococcus caseolyticus JCSC5402 7385674 YP_002559355.1 CDS MCCL_plsB0024 NC_011996.1 27554 28399 D similar to beta-lactamase; hypothetical protein 27554..28399 Macrococcus caseolyticus JCSC5402 7385675 YP_002559356.1 CDS MCCL_plsB0025 NC_011996.1 28722 29954 D truncated DNA methyltransferase 28722..29954 Macrococcus caseolyticus JCSC5402 7385676 YP_002559357.1 CDS MCCL_plsB0026 NC_011996.1 29956 30894 D DNA methyltransferase homologue 29956..30894 Macrococcus caseolyticus JCSC5402 7385677 YP_002559358.1 CDS MCCL_plsB0027 NC_011996.1 30941 32716 D similar to restriction endonuclease; hypothetical protein 30941..32716 Macrococcus caseolyticus JCSC5402 7385678 YP_002559359.1 CDS MCCL_plsB0028 NC_011996.1 33252 33653 R no similarity; hypothetical protein complement(33252..33653) Macrococcus caseolyticus JCSC5402 7385679 YP_002559360.1 CDS MCCL_plsB0029 NC_011996.1 33813 34469 D similar to functionally unknown protein; hypothetical protein 33813..34469 Macrococcus caseolyticus JCSC5402 7385680 YP_002559361.1 CDS MCCL_plsB0030 NC_011996.1 34444 35154 D similar to functionally unknown protein; hypothetical protein 34444..35154 Macrococcus caseolyticus JCSC5402 7385681 YP_002559362.1 CDS MCCL_plsB0031 NC_011996.1 35489 35788 D no similarity; hypothetical protein 35489..35788 Macrococcus caseolyticus JCSC5402 7385682 YP_002559363.1 CDS MCCL_plsB0032 NC_011996.1 36347 36928 R integrase; resolvase complement(36347..36928) Macrococcus caseolyticus JCSC5402 7385683 YP_002559364.1 CDS MCCL_plsB0033 NC_011996.1 37167 37616 R no similarity; hypothetical protein complement(37167..37616) Macrococcus caseolyticus JCSC5402 7385684 YP_002559365.1 CDS MCCL_plsB0034 NC_011996.1 38035 38457 R no similarity; hypothetical protein complement(38035..38457) Macrococcus caseolyticus JCSC5402 7385685 YP_002559366.1 CDS MCCL_plsB0035 NC_011996.1 38758 39627 R truncated integrase complement(38758..39627) Macrococcus caseolyticus JCSC5402 7385686 YP_002559367.1 CDS MCCL_plsB0036 NC_011996.1 39933 41168 D no similarity; hypothetical protein 39933..41168 Macrococcus caseolyticus JCSC5402 7385687 YP_002559368.1 CDS tnp NC_011996.1 41206 42165 R transposase complement(41206..42165) Macrococcus caseolyticus JCSC5402 7385688 YP_002559369.1 CDS MCCL_plsB0038 NC_011996.1 42412 42705 D no similarity; hypothetical protein 42412..42705 Macrococcus caseolyticus JCSC5402 7385718 YP_002559370.1 CDS MCCL_plsB0039 NC_011996.1 42626 43138 D similar to functionally unknown protein; hypothetical protein 42626..43138 Macrococcus caseolyticus JCSC5402 7385689 YP_002559371.1 CDS tnp NC_011996.1 43170 43856 D transposase for IS1216 43170..43856 Macrococcus caseolyticus JCSC5402 7385690 YP_002559372.1 CDS MCCL_plsB0041 NC_011996.1 44169 45644 D kanamycin/gentamycin resistance determinant; bifunctional aminoglycoside N-acetyltransferase and aminoglycoside phosphotransferase 44169..45644 Macrococcus caseolyticus JCSC5402 7385719 YP_002559373.1 CDS MCCL_plsB0042 NC_011996.1 46225 46962 D erythromycin resistance determinant; rRNA adenine N-6-methyltransferase 46225..46962 Macrococcus caseolyticus JCSC5402 7385691 YP_002559374.1 CDS MCCL_plsB0043 NC_011996.1 47317 47871 D resolvase 47317..47871 Macrococcus caseolyticus JCSC5402 7385692 YP_002559375.1 CDS tnp NC_011996.1 47875 50793 D transposase 47875..50793 Macrococcus caseolyticus JCSC5402 7385693 YP_002559376.1 CDS tnp NC_011996.1 51100 54063 D transposase for Tn1546 51100..54063 Macrococcus caseolyticus JCSC5402 7385720 YP_002559377.1 CDS MCCL_plsB0046 NC_011996.1 54618 54935 R no similarity; hypothetical protein complement(54618..54935) Macrococcus caseolyticus JCSC5402 7385721 YP_002559378.1 CDS tnp NC_011996.1 55374 56060 R transposase for IS1216 complement(55374..56060) Macrococcus caseolyticus JCSC5402 7385694 YP_002559379.1 CDS MCCL_plsB0048 NC_011996.1 56432 56737 D no similarity; hypothetical protein 56432..56737 Macrococcus caseolyticus JCSC5402 7385722 YP_002559380.1 CDS MCCL_plsB0049 NC_011996.1 56765 57376 R resolvase complement(56765..57376) Macrococcus caseolyticus JCSC5402 7385695 YP_002559381.1 CDS MCCL_plsB0050 NC_011996.1 57703 58278 D resolvase 57703..58278 Macrococcus caseolyticus JCSC5402 7385696 YP_002559382.1 CDS MCCL_plsB0051 NC_011996.1 58359 58853 D similar to dihydrofolate reductase; hypothetical protein 58359..58853 Macrococcus caseolyticus JCSC5402 7385697 YP_002559383.1 CDS MCCL_plsB0052 NC_011996.1 58850 59557 D similar to thymidylate synthase; hypothetical protein 58850..59557 Macrococcus caseolyticus JCSC5402 7385698 YP_002559384.1 CDS MCCL_plsB0053 NC_011996.1 60101 60553 D similar to DNA repair protein RadC; hypothetical protein 60101..60553 Macrococcus caseolyticus JCSC5402 7385699 YP_002559385.1 CDS MCCL_plsB0054 NC_011996.1 60825 61169 R no similarity; hypothetical protein complement(60825..61169) Macrococcus caseolyticus JCSC5402 7385700 YP_002559386.1 CDS MCCL_plsB0055 NC_011996.1 61566 61955 D no similarity; hypothetical protein 61566..61955 Macrococcus caseolyticus JCSC5402 7385701 YP_002559387.1 CDS MCCL_plsB0056 NC_011996.1 63203 64009 D similar to plasmid replication-associated protein; hypothetical protein 63203..64009 Macrococcus caseolyticus JCSC5402 7385702 YP_002559388.1 CDS MCCL_plsB0057 NC_011996.1 64011 64313 D no similarity; hypothetical protein 64011..64313 Macrococcus caseolyticus JCSC5402 7385703 YP_002559389.1 CDS MCCL_plsB0058 NC_011996.1 64814 66304 D plasmid replication protein 64814..66304 Macrococcus caseolyticus JCSC5402 7385704 YP_002559390.1 CDS MCCL_plsB0059 NC_011996.1 66607 67089 D no similarity; hypothetical protein 66607..67089 Macrococcus caseolyticus JCSC5402 7385705 YP_002559391.1 CDS MCCL_plsB0060 NC_011996.1 67655 67990 D similar to functionally unknown protein; hypothetical protein 67655..67990 Macrococcus caseolyticus JCSC5402 7385706 YP_002559392.1 CDS MCCL_plsB0061 NC_011996.1 68439 69086 D no similarity; hypothetical protein 68439..69086 Macrococcus caseolyticus JCSC5402 7385707 YP_002559393.1 CDS MCCL_plsB0062 NC_011996.1 69232 69534 D no similarity; hypothetical protein 69232..69534 Macrococcus caseolyticus JCSC5402 7385708 YP_002559394.1 CDS MCCL_plsB0064 NC_011996.1 69969 70274 D no similarity; hypothetical protein 69969..70274 Macrococcus caseolyticus JCSC5402 7385709 YP_002559395.1 CDS MCCL_plsB0063 NC_011996.1 70251 70880 R similar to functionally unknown protein; hypothetical protein complement(70251..70880) Macrococcus caseolyticus JCSC5402 7385711 YP_002559396.1 CDS MCCL_plsB0065 NC_011996.1 71327 74662 D similar to functionally unknown protein; hypothetical protein 71327..74662 Macrococcus caseolyticus JCSC5402 7385710 YP_002559397.1 CDS MCCL_plsB0066 NC_011996.1 75009 75326 D similar to functionally unknown protein; hypothetical protein 75009..75326 Macrococcus caseolyticus JCSC5402 7385712 YP_002559398.1 CDS MCCL_plsB0067 NC_011996.1 75379 77844 D similar to functionally unknown protein; hypothetical protein 75379..77844 Macrococcus caseolyticus JCSC5402 7385713 YP_002559399.1 CDS MCCL_plsB0068 NC_011996.1 77862 78797 D no similarity; hypothetical protein 77862..78797 Macrococcus caseolyticus JCSC5402 7385714 YP_002559400.1 CDS MCCL_plsB0069 NC_011996.1 78798 79343 D no similarity; hypothetical protein 78798..79343 Macrococcus caseolyticus JCSC5402 7385715 YP_002559401.1 CDS MCCL_plsC0001 NC_011997.1 1 996 D plasmid replication initiation protein 1..996 Macrococcus caseolyticus JCSC5402 7385725 YP_002559402.1 CDS MCCL_plsD0001 NC_011998.1 619 1620 R plasmid replication initiation protein complement(619..1620) Macrococcus caseolyticus JCSC5402 7385728 YP_002559403.1 CDS MCCL_plsD0002 NC_011998.1 2089 3264 R similar to mobilization protein; hypothetical protein complement(2089..3264) Macrococcus caseolyticus JCSC5402 7385727 YP_002559404.1 CDS dnaA NC_011999.1 348 1685 D chromosomal replication initiation protein DnaA 348..1685 Macrococcus caseolyticus JCSC5402 7389666 YP_002559405.1 CDS dnaN NC_011999.1 1859 2992 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1859..2992 Macrococcus caseolyticus JCSC5402 7390506 YP_002559406.1 CDS MCCL_0003 NC_011999.1 3088 3984 D Na+ efflux pump, ATP-binding protein 3088..3984 Macrococcus caseolyticus JCSC5402 7390547 YP_002559407.1 CDS MCCL_0004 NC_011999.1 3977 5218 D sodium ABC transporter permease 3977..5218 Macrococcus caseolyticus JCSC5402 7390555 YP_002559408.1 CDS dsbD NC_011999.1 5308 6015 D thiol-disulfide oxidoreductase 5308..6015 Macrococcus caseolyticus JCSC5402 7389667 YP_002559409.1 CDS dsbC NC_011999.1 6012 6428 D thiol-disulfide oxidoreductase DsbC 6012..6428 Macrococcus caseolyticus JCSC5402 7389668 YP_002559410.1 CDS recF NC_011999.1 6785 7894 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 6785..7894 Macrococcus caseolyticus JCSC5402 7390558 YP_002559411.1 CDS gyrB NC_011999.1 7902 9830 D DNA gyrase subunit B 7902..9830 Macrococcus caseolyticus JCSC5402 7390557 YP_002559412.1 CDS gyrA NC_011999.1 9858 12497 D DNA gyrase subunit A 9858..12497 Macrococcus caseolyticus JCSC5402 7389877 YP_002559413.1 CDS alsS NC_011999.1 12692 14359 D catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 12692..14359 Macrococcus caseolyticus JCSC5402 7391115 YP_002559414.1 CDS alsD NC_011999.1 14370 15071 D alpha-acetolactate decarboxylase 14370..15071 Macrococcus caseolyticus JCSC5402 7391114 YP_002559415.1 CDS MCCL_0012 NC_011999.1 15095 15913 R similar to functionally unknown protein; hypothetical protein complement(15095..15913) Macrococcus caseolyticus JCSC5402 7390184 YP_002559416.1 CDS serS NC_011999.1 16258 17529 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 16258..17529 Macrococcus caseolyticus JCSC5402 7390183 YP_002559417.1 CDS MCCL_0014 NC_011999.1 17757 18272 D similar to functionally unknown protein; hypothetical protein 17757..18272 Macrococcus caseolyticus JCSC5402 7389669 YP_002559418.1 CDS MCCL_0015 NC_011999.1 18404 19315 D similar to functionally unknown protein; hypothetical protein 18404..19315 Macrococcus caseolyticus JCSC5402 7389578 YP_002559419.1 CDS MCCL_0016 NC_011999.1 19345 21168 D similar to functionally unknown protein; hypothetical protein 19345..21168 Macrococcus caseolyticus JCSC5402 7389670 YP_002559420.1 CDS rplI NC_011999.1 21309 21755 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 21309..21755 Macrococcus caseolyticus JCSC5402 7389671 YP_002559421.1 CDS dnaB NC_011999.1 21773 23179 D DnaB helicase 21773..23179 Macrococcus caseolyticus JCSC5402 7389672 YP_002559422.1 CDS purA NC_011999.1 23502 24791 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 23502..24791 Macrococcus caseolyticus JCSC5402 7389520 YP_002559423.1 CDS MCCL_0020 NC_011999.1 24875 25762 R similar to functionally unknown protein; hypothetical protein complement(24875..25762) Macrococcus caseolyticus JCSC5402 7390548 YP_002559424.1 CDS MCCL_0021 NC_011999.1 26181 26882 D DNA-binding response regulator 26181..26882 Macrococcus caseolyticus JCSC5402 7390121 YP_002559425.1 CDS MCCL_0022 NC_011999.1 26887 28725 D two-component sensor histidine kinase 26887..28725 Macrococcus caseolyticus JCSC5402 7390122 YP_002559426.1 CDS MCCL_0023 NC_011999.1 28706 30031 D similar to functionally unknown protein; hypothetical protein 28706..30031 Macrococcus caseolyticus JCSC5402 7389674 YP_002559427.1 CDS MCCL_0024 NC_011999.1 30031 30822 D similar to functionally unknown protein; hypothetical protein 30031..30822 Macrococcus caseolyticus JCSC5402 7389675 YP_002559428.1 CDS MCCL_0025 NC_011999.1 30840 31631 D metallo-beta-lactamase family protein YycJ 30840..31631 Macrococcus caseolyticus JCSC5402 7389676 YP_002559429.1 CDS orfX NC_011999.1 31891 32370 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 31891..32370 Macrococcus caseolyticus JCSC5402 7389677 YP_002559430.1 CDS MCCL_0027 NC_011999.1 32496 32957 D similar to acetyltransferase; hypothetical protein 32496..32957 Macrococcus caseolyticus JCSC5402 7389678 YP_002559431.1 CDS MCCL_0028 NC_011999.1 32997 33344 D similar to functionally unknown protein; hypothetical protein 32997..33344 Macrococcus caseolyticus JCSC5402 7390751 YP_002559432.1 CDS MCCL_0029 NC_011999.1 33312 33806 R transposase complement(33312..33806) Macrococcus caseolyticus JCSC5402 7389679 YP_002559433.1 CDS MCCL_0030 NC_011999.1 34042 36297 D daunorubicin resistance protein 34042..36297 Macrococcus caseolyticus JCSC5402 7389680 YP_002559434.1 CDS MCCL_0031 NC_011999.1 36769 37287 D similar to ThiJ/PfpI family protein; hypothetical protein 36769..37287 Macrococcus caseolyticus JCSC5402 7389681 YP_002559435.1 CDS MCCL_0032 NC_011999.1 37362 37664 D similar to functionally unknown protein; hypothetical protein 37362..37664 Macrococcus caseolyticus JCSC5402 7389682 YP_002559436.1 CDS MCCL_0033 NC_011999.1 38438 39064 D similar to functionally unknown protein; hypothetical protein 38438..39064 Macrococcus caseolyticus JCSC5402 7389683 YP_002559437.1 CDS MCCL_0034 NC_011999.1 39042 39764 D similar to functionally unknown protein; hypothetical protein 39042..39764 Macrococcus caseolyticus JCSC5402 7389684 YP_002559438.1 CDS MCCL_0035 NC_011999.1 39894 40481 D similar to MutT/Nudix family protein; hypothetical protein 39894..40481 Macrococcus caseolyticus JCSC5402 7389685 YP_002559439.1 CDS MCCL_0036 NC_011999.1 40582 41031 R similar to functionally unknown protein; hypothetical protein complement(40582..41031) Macrococcus caseolyticus JCSC5402 7389686 YP_002559440.1 CDS MCCL_0037 NC_011999.1 41117 41752 R hexulose-6-phosphate synthase complement(41117..41752) Macrococcus caseolyticus JCSC5402 7389687 YP_002559441.1 CDS MCCL_0038 NC_011999.1 41855 42214 D transcriptional regulator family protein 41855..42214 Macrococcus caseolyticus JCSC5402 7389688 YP_002559442.1 CDS MCCL_0039 NC_011999.1 42746 43138 D similar to functionally unknown protein; hypothetical protein 42746..43138 Macrococcus caseolyticus JCSC5402 7389689 YP_002559443.1 CDS MCCL_0040 NC_011999.1 43179 45440 D daunorubicin resistance protein 43179..45440 Macrococcus caseolyticus JCSC5402 7389690 YP_002559444.1 CDS MCCL_0041 NC_011999.1 45605 46933 R similar to sodium-dependent transporter; hypothetical protein complement(45605..46933) Macrococcus caseolyticus JCSC5402 7389691 YP_002559445.1 CDS MCCL_0042 NC_011999.1 47084 47575 D similar to functionally unknown protein; hypothetical protein 47084..47575 Macrococcus caseolyticus JCSC5402 7389692 YP_002559446.1 CDS MCCL_0043 NC_011999.1 47790 48143 D similar to functionally unknown protein; hypothetical protein 47790..48143 Macrococcus caseolyticus JCSC5402 7389693 YP_002559447.1 CDS MCCL_0044 NC_011999.1 48220 48741 R similar to NADPH-dependent FMN reductase; hypothetical protein complement(48220..48741) Macrococcus caseolyticus JCSC5402 7389694 YP_002559448.1 CDS MCCL_0045 NC_011999.1 48904 49254 R transcriptional regulator family protein complement(48904..49254) Macrococcus caseolyticus JCSC5402 7389695 YP_002559449.1 CDS MCCL_0046 NC_011999.1 49331 50014 D similar to functionally unknown protein; hypothetical protein 49331..50014 Macrococcus caseolyticus JCSC5402 7389696 YP_002559450.1 CDS MCCL_0047 NC_011999.1 50037 50702 D similar to functionally unknown protein; hypothetical protein 50037..50702 Macrococcus caseolyticus JCSC5402 7389697 YP_002559451.1 CDS MCCL_0048 NC_011999.1 50706 51707 D quinone oxidoreductase 50706..51707 Macrococcus caseolyticus JCSC5402 7389698 YP_002559452.1 CDS MCCL_0049 NC_011999.1 51905 52387 D similar to functionally unknown protein; hypothetical protein 51905..52387 Macrococcus caseolyticus JCSC5402 7389699 YP_002559453.1 CDS MCCL_0050 NC_011999.1 52478 53848 D branched-chain amino acid transporter carrier protein 52478..53848 Macrococcus caseolyticus JCSC5402 7389700 YP_002559454.1 CDS MCCL_0051 NC_011999.1 53913 54341 R similar to general stress protein; hypothetical protein complement(53913..54341) Macrococcus caseolyticus JCSC5402 7389701 YP_002559455.1 CDS MCCL_0052 NC_011999.1 54461 54904 D similar to transcriptional regulator; hypothetical protein 54461..54904 Macrococcus caseolyticus JCSC5402 7389702 YP_002559456.1 CDS MCCL_0053 NC_011999.1 55143 56327 D similar to oxidoreductase family protein; hypothetical protein 55143..56327 Macrococcus caseolyticus JCSC5402 7389703 YP_002559457.1 CDS MCCL_0054 NC_011999.1 56382 57314 D 2-dehydropantoate 2-reductase 56382..57314 Macrococcus caseolyticus JCSC5402 7389704 YP_002559458.1 CDS MCCL_0055 NC_011999.1 57335 57823 R similar to S. epidermidis secretory antigen SsaA; hypothetical protein complement(57335..57823) Macrococcus caseolyticus JCSC5402 7389705 YP_002559459.1 CDS katA NC_011999.1 57857 59344 R catalase complement(57857..59344) Macrococcus caseolyticus JCSC5402 7389706 YP_002559460.1 CDS MCCL_0057 NC_011999.1 59562 60512 R dehydrogenase family protein complement(59562..60512) Macrococcus caseolyticus JCSC5402 7389707 YP_002559461.1 CDS MCCL_0058 NC_011999.1 60649 61563 R similar to 3-hydroxyacyl-CoA dehydrogenase; hypothetical protein complement(60649..61563) Macrococcus caseolyticus JCSC5402 7391152 YP_002559462.1 CDS MCCL_0059 NC_011999.1 61676 62440 R similar to homoserine O-succinyltransferase; hypothetical protein complement(61676..62440) Macrococcus caseolyticus JCSC5402 7389708 YP_002559463.1 CDS MCCL_0060 NC_011999.1 62442 63719 R O-acetylhomoserine (thiol)-lyase complement(62442..63719) Macrococcus caseolyticus JCSC5402 7389709 YP_002559464.1 CDS MCCL_0061 NC_011999.1 63953 64735 R no similarity; hypothetical protein complement(63953..64735) Macrococcus caseolyticus JCSC5402 7389710 YP_002559465.1 CDS MCCL_0062 NC_011999.1 64880 65416 D no similarity; hypothetical protein 64880..65416 Macrococcus caseolyticus JCSC5402 7389711 YP_002559466.1 CDS MCCL_0063 NC_011999.1 65520 65837 R thioredoxin complement(65520..65837) Macrococcus caseolyticus JCSC5402 7389712 YP_002559467.1 CDS MCCL_0064 NC_011999.1 65864 66352 R acetyltransferase family protein complement(65864..66352) Macrococcus caseolyticus JCSC5402 7389713 YP_002559468.1 CDS MCCL_0065 NC_011999.1 66485 67012 D no similarity; hypothetical protein 66485..67012 Macrococcus caseolyticus JCSC5402 7389714 YP_002559469.1 CDS MCCL_0066 NC_011999.1 67046 68218 D peptidase M20/M25/M40 family protein 67046..68218 Macrococcus caseolyticus JCSC5402 7389715 YP_002559470.1 CDS MCCL_0067 NC_011999.1 68365 68742 R similar to functionally unknown protein; hypothetical protein complement(68365..68742) Macrococcus caseolyticus JCSC5402 7389716 YP_002559471.1 CDS MCCL_0068 NC_011999.1 68739 69629 R similar to cell-division inhibitor; hypothetical protein complement(68739..69629) Macrococcus caseolyticus JCSC5402 7389717 YP_002559472.1 CDS MCCL_0069 NC_011999.1 69739 70662 R similar to dioxygenase family protein; hypothetical protein complement(69739..70662) Macrococcus caseolyticus JCSC5402 7389718 YP_002559473.1 CDS MCCL_0070 NC_011999.1 70969 71928 D glyoxalase family protein 70969..71928 Macrococcus caseolyticus JCSC5402 7389719 YP_002559474.1 CDS MCCL_0071 NC_011999.1 72234 73226 R D-specific D-2-hydroxyacid dehydrogenase complement(72234..73226) Macrococcus caseolyticus JCSC5402 7390833 YP_002559475.1 CDS MCCL_0072 NC_011999.1 73713 74060 D similar to functionally unknown protein; hypothetical protein 73713..74060 Macrococcus caseolyticus JCSC5402 7390834 YP_002559476.1 CDS MCCL_0073 NC_011999.1 74433 75035 D phospholipase/carboxylesterase family protein 74433..75035 Macrococcus caseolyticus JCSC5402 7390835 YP_002559477.1 CDS MCCL_0074 NC_011999.1 75941 76480 D similar to functionally unknown protein; hypothetical protein 75941..76480 Macrococcus caseolyticus JCSC5402 7390836 YP_002559478.1 CDS MCCL_0075 NC_011999.1 76527 77111 R similar to transcriptional regulator, TetR family; hypothetical protein complement(76527..77111) Macrococcus caseolyticus JCSC5402 7390837 YP_002559479.1 CDS MCCL_0076 NC_011999.1 77268 79037 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 77268..79037 Macrococcus caseolyticus JCSC5402 7390838 YP_002559480.1 CDS MCCL_0077 NC_011999.1 79309 80646 D sodium-dependent transporter 79309..80646 Macrococcus caseolyticus JCSC5402 7390839 YP_002559481.1 CDS MCCL_0078 NC_011999.1 80693 81256 R similar to carboxylesterase; hypothetical protein complement(80693..81256) Macrococcus caseolyticus JCSC5402 7390840 YP_002559482.1 CDS MCCL_0079 NC_011999.1 81714 83108 D similar to amino acid permease; hypothetical protein 81714..83108 Macrococcus caseolyticus JCSC5402 7390841 YP_002559483.1 CDS MCCL_0080 NC_011999.1 83239 85239 D catalase 83239..85239 Macrococcus caseolyticus JCSC5402 7390842 YP_002559484.1 CDS MCCL_0081 NC_011999.1 85317 85799 R similar to pyridoxamine 5'-phosphate oxidase; hypothetical protein complement(85317..85799) Macrococcus caseolyticus JCSC5402 7390843 YP_002559485.1 CDS MCCL_0082 NC_011999.1 86146 87711 D sodium-alanine symporter 86146..87711 Macrococcus caseolyticus JCSC5402 7390844 YP_002559486.1 CDS MCCL_0083 NC_011999.1 87844 88155 D similar to functionally unknown protein; hypothetical protein 87844..88155 Macrococcus caseolyticus JCSC5402 7390845 YP_002559487.1 CDS MCCL_0084 NC_011999.1 88152 88487 D sodium-dependent symporter 88152..88487 Macrococcus caseolyticus JCSC5402 7390846 YP_002559488.1 CDS MCCL_0085 NC_011999.1 88468 89700 D sodium-dependent symporter 88468..89700 Macrococcus caseolyticus JCSC5402 7390847 YP_002559489.1 CDS MCCL_0086 NC_011999.1 89781 90452 R ABC transporter ATP-binding protein complement(89781..90452) Macrococcus caseolyticus JCSC5402 7390848 YP_002559490.1 CDS MCCL_0087 NC_011999.1 90455 91477 R similar to ABC transporter permease; hypothetical protein complement(90455..91477) Macrococcus caseolyticus JCSC5402 7390849 YP_002559491.1 CDS MCCL_0088 NC_011999.1 91556 92227 D similar to two-component response regulator; hypothetical protein 91556..92227 Macrococcus caseolyticus JCSC5402 7390850 YP_002559492.1 CDS MCCL_0089 NC_011999.1 92220 93557 D similar to two-component sensor kinase protein; hypothetical protein 92220..93557 Macrococcus caseolyticus JCSC5402 7390851 YP_002559493.1 CDS MCCL_0090 NC_011999.1 93683 94558 D short-chain dehydrogenase/reductase family protein 93683..94558 Macrococcus caseolyticus JCSC5402 7390852 YP_002559494.1 CDS MCCL_0091 NC_011999.1 94670 95779 D similar to functionally unknown protein; hypothetical protein 94670..95779 Macrococcus caseolyticus JCSC5402 7390853 YP_002559495.1 CDS MCCL_0092 NC_011999.1 95776 96543 D similar to functionally unknown protein; hypothetical protein 95776..96543 Macrococcus caseolyticus JCSC5402 7390854 YP_002559496.1 CDS MCCL_0093 NC_011999.1 96559 97482 R ABC transporter complement(96559..97482) Macrococcus caseolyticus JCSC5402 7390855 YP_002559497.1 CDS MCCL_0094 NC_011999.1 97488 98315 R ABC transporter permease complement(97488..98315) Macrococcus caseolyticus JCSC5402 7390856 YP_002559498.1 CDS MCCL_0095 NC_011999.1 98316 99017 R similar to ABC transporter ATP-binding protein; hypothetical protein complement(98316..99017) Macrococcus caseolyticus JCSC5402 7390857 YP_002559499.1 CDS MCCL_0096 NC_011999.1 99146 99784 D iron-dependent repressor 99146..99784 Macrococcus caseolyticus JCSC5402 7390858 YP_002559500.1 CDS MCCL_0097 NC_011999.1 99818 100642 R formate/nitrite transporter family protein complement(99818..100642) Macrococcus caseolyticus JCSC5402 7390859 YP_002559501.1 CDS MCCL_0098 NC_011999.1 100986 101555 D alkyl hydroperoxide reductase subunit C 100986..101555 Macrococcus caseolyticus JCSC5402 7390860 YP_002559502.1 CDS MCCL_0099 NC_011999.1 101662 103185 D alkyl hydroperoxide reductase (large subunit) and NADH dehydrogenase 101662..103185 Macrococcus caseolyticus JCSC5402 7390861 YP_002559503.1 CDS MCCL_0100 NC_011999.1 103274 104041 D similar to molybdate transporter substrate-binding protein; hypothetical protein 103274..104041 Macrococcus caseolyticus JCSC5402 7390862 YP_002559504.1 CDS MCCL_0101 NC_011999.1 104591 105880 D similar to MFS Sugar transporter superfamily protein; hypothetical protein 104591..105880 Macrococcus caseolyticus JCSC5402 7390863 YP_002559505.1 CDS MCCL_0102 NC_011999.1 106082 107554 D similar to functionally unknown protein; hypothetical protein 106082..107554 Macrococcus caseolyticus JCSC5402 7390864 YP_002559506.1 CDS MCCL_0103 NC_011999.1 107575 108732 D similar to functionally unknown protein; hypothetical protein 107575..108732 Macrococcus caseolyticus JCSC5402 7390865 YP_002559507.1 CDS MCCL_0104 NC_011999.1 108729 109649 D similar to functionally unknown protein; hypothetical protein 108729..109649 Macrococcus caseolyticus JCSC5402 7390866 YP_002559508.1 CDS MCCL_0105 NC_011999.1 109711 110343 D similar to ABC transporter ATP-binding protein; hypothetical protein 109711..110343 Macrococcus caseolyticus JCSC5402 7390867 YP_002559509.1 CDS MCCL_0106 NC_011999.1 110542 111177 D FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 110542..111177 Macrococcus caseolyticus JCSC5402 7390868 YP_002559510.1 CDS MCCL_0107 NC_011999.1 111222 112625 R similar to functionally unknown protein; hypothetical protein complement(111222..112625) Macrococcus caseolyticus JCSC5402 7390869 YP_002559511.1 CDS MCCL_0108 NC_011999.1 112766 114511 D similar to functionally unknown protein; hypothetical protein 112766..114511 Macrococcus caseolyticus JCSC5402 7390870 YP_002559512.1 CDS MCCL_0109 NC_011999.1 114570 116321 D similar to two-component sensor histidine kinase; hypothetical protein 114570..116321 Macrococcus caseolyticus JCSC5402 7390871 YP_002559513.1 CDS MCCL_0110 NC_011999.1 116318 117028 D similar to two-component response regulator; two-component response regulator 116318..117028 Macrococcus caseolyticus JCSC5402 7390872 YP_002559514.1 CDS MCCL_0111 NC_011999.1 117148 117573 D negatively regulates murein hydrolase activity; murein hydrolase regulator LrgA 117148..117573 Macrococcus caseolyticus JCSC5402 7390873 YP_002559515.1 CDS MCCL_0112 NC_011999.1 117575 118282 D in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB 117575..118282 Macrococcus caseolyticus JCSC5402 7390874 YP_002559516.1 CDS MCCL_0113 NC_011999.1 118421 119470 D similar to ABC transporter permease; hypothetical protein 118421..119470 Macrococcus caseolyticus JCSC5402 7390875 YP_002559517.1 CDS MCCL_0114 NC_011999.1 119481 120146 D ABC transporter ATP-binding protein 119481..120146 Macrococcus caseolyticus JCSC5402 7390876 YP_002559518.1 CDS MCCL_0115 NC_011999.1 120193 121026 R similar to functionally unknown protein; hypothetical protein complement(120193..121026) Macrococcus caseolyticus JCSC5402 7390877 YP_002559519.1 CDS MCCL_0116 NC_011999.1 121125 123989 R similar to functionally unknown protein; hypothetical protein complement(121125..123989) Macrococcus caseolyticus JCSC5402 7390878 YP_002559520.1 CDS MCCL_0117 NC_011999.1 124184 125170 R similar to molybdopterin biosynthesis protein moeB; hypothetical protein complement(124184..125170) Macrococcus caseolyticus JCSC5402 7390879 YP_002559521.1 CDS thiG NC_011999.1 125167 125934 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(125167..125934) Macrococcus caseolyticus JCSC5402 7390880 YP_002559522.1 CDS MCCL_0119 NC_011999.1 126114 127220 R similar to glycine oxidase; hypothetical protein complement(126114..127220) Macrococcus caseolyticus JCSC5402 7390881 YP_002559523.1 CDS thiE NC_011999.1 127193 127774 R thiamine monophosphate synthase ThiE complement(127193..127774) Macrococcus caseolyticus JCSC5402 7390467 YP_002559524.1 CDS MCCL_0121 NC_011999.1 128037 128501 D no similarity; hypothetical protein 128037..128501 Macrococcus caseolyticus JCSC5402 7390882 YP_002559525.1 CDS MCCL_0122 NC_011999.1 128669 129154 D GCN5-related N-acetyltransferase 128669..129154 Macrococcus caseolyticus JCSC5402 7390465 YP_002559526.1 CDS MCCL_0123 NC_011999.1 129151 129543 D similar to functionally unknown protein; hypothetical protein 129151..129543 Macrococcus caseolyticus JCSC5402 7390883 YP_002559527.1 CDS MCCL_0124 NC_011999.1 129560 129976 R no similarity; hypothetical protein complement(129560..129976) Macrococcus caseolyticus JCSC5402 7390884 YP_002559528.1 CDS MCCL_0125 NC_011999.1 130294 130833 R toxic anion resistance protein complement(130294..130833) Macrococcus caseolyticus JCSC5402 7390885 YP_002559529.1 CDS MCCL_0126 NC_011999.1 131065 131670 R alkaline phosphatase complement(131065..131670) Macrococcus caseolyticus JCSC5402 7390886 YP_002559530.1 CDS MCCL_0127 NC_011999.1 131844 132173 D similar to functionally unknown protein; hypothetical protein 131844..132173 Macrococcus caseolyticus JCSC5402 7390887 YP_002559531.1 CDS MCCL_0128 NC_011999.1 132267 133505 D lysostaphin immunity factor FmhA 132267..133505 Macrococcus caseolyticus JCSC5402 7390888 YP_002559532.1 CDS MCCL_0129 NC_011999.1 133554 134270 R purine nucleoside phosphorylase complement(133554..134270) Macrococcus caseolyticus JCSC5402 7390889 YP_002559533.1 CDS MCCL_0130 NC_011999.1 134376 135053 R similar to molybdate transporter permease; hypothetical protein complement(134376..135053) Macrococcus caseolyticus JCSC5402 7390890 YP_002559534.1 CDS MCCL_0131 NC_011999.1 135176 136333 D similar to functionally unknown protein; hypothetical protein 135176..136333 Macrococcus caseolyticus JCSC5402 7390891 YP_002559535.1 CDS MCCL_0132 NC_011999.1 136344 137258 R similar to transporter EamA family; hypothetical protein complement(136344..137258) Macrococcus caseolyticus JCSC5402 7390892 YP_002559536.1 CDS MCCL_0133 NC_011999.1 137412 138323 D iron compound ABC transporter binding protein 137412..138323 Macrococcus caseolyticus JCSC5402 7390893 YP_002559537.1 CDS MCCL_0134 NC_011999.1 138435 138983 D similar to biotin biosynthesis BioY family protein; hypothetical protein 138435..138983 Macrococcus caseolyticus JCSC5402 7390894 YP_002559538.1 CDS MCCL_0135 NC_011999.1 139025 139813 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(139025..139813) Macrococcus caseolyticus JCSC5402 7390895 YP_002559539.1 CDS narG NC_011999.1 140020 143694 D respiratory nitrate reductase alpha chain 140020..143694 Macrococcus caseolyticus JCSC5402 7390896 YP_002559540.1 CDS narH NC_011999.1 143684 145234 D respiratory nitrate reductase beta chain 143684..145234 Macrococcus caseolyticus JCSC5402 7390897 YP_002559541.1 CDS narJ NC_011999.1 145128 145805 D respiratory nitrate reductase delta chain 145128..145805 Macrococcus caseolyticus JCSC5402 7390724 YP_002559542.1 CDS narI NC_011999.1 145798 146472 D nitrate reductase gamma chain 145798..146472 Macrococcus caseolyticus JCSC5402 7390725 YP_002559543.1 CDS nreA NC_011999.1 146507 146965 D control of nitrate reduction protein NreA 146507..146965 Macrococcus caseolyticus JCSC5402 7390727 YP_002559544.1 CDS nreB NC_011999.1 146952 147983 D two-component sensor histidine kinase of nitrate reduction operon; two-component sensor histidine kinase 146952..147983 Macrococcus caseolyticus JCSC5402 7390726 YP_002559545.1 CDS nreC NC_011999.1 147994 148644 D two-component response regulator NreC 147994..148644 Macrococcus caseolyticus JCSC5402 7390735 YP_002559546.1 CDS MCCL_0143 NC_011999.1 148781 149287 D no similarity; hypothetical protein 148781..149287 Macrococcus caseolyticus JCSC5402 7390736 YP_002559547.1 CDS MCCL_0144 NC_011999.1 149441 150598 D nitrite extrusion protein 149441..150598 Macrococcus caseolyticus JCSC5402 7390737 YP_002559548.1 CDS moeB NC_011999.1 150609 151598 D molybdopterin biosynthesis protein MoeB 150609..151598 Macrococcus caseolyticus JCSC5402 7390898 YP_002559549.1 CDS moaB NC_011999.1 151610 152110 D molybdenum cofactor biosynthesis protein MoaB 151610..152110 Macrococcus caseolyticus JCSC5402 7390899 YP_002559550.1 CDS moaC NC_011999.1 152111 152587 R molybdenum cofactor biosynthesis protein MoaC complement(152111..152587) Macrococcus caseolyticus JCSC5402 7390704 YP_002559551.1 CDS moeA NC_011999.1 152651 153895 D molybdopterin biosynthesis protein MoeA 152651..153895 Macrococcus caseolyticus JCSC5402 7390697 YP_002559552.1 CDS mobB NC_011999.1 153943 154368 D molybdopterin-guanine dinucleotide biosynthesis protein B 153943..154368 Macrococcus caseolyticus JCSC5402 7390698 YP_002559553.1 CDS moaE NC_011999.1 154355 154795 D molybdopterin converting factor subunit 2 154355..154795 Macrococcus caseolyticus JCSC5402 7390703 YP_002559554.1 CDS moaD NC_011999.1 154800 155033 D molybdopterin converting factor small subunit 154800..155033 Macrococcus caseolyticus JCSC5402 7390702 YP_002559555.1 CDS mobA NC_011999.1 155034 155645 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 155034..155645 Macrococcus caseolyticus JCSC5402 7390700 YP_002559556.1 CDS moaA NC_011999.1 155626 156636 D molybdenum cofactor biosynthesis protein MoaA 155626..156636 Macrococcus caseolyticus JCSC5402 7390699 YP_002559557.1 CDS MCCL_0154 NC_011999.1 156900 157892 D fatty acid desaturase 156900..157892 Macrococcus caseolyticus JCSC5402 7390701 YP_002559558.1 CDS MCCL_0155 NC_011999.1 157926 158957 R no similarity; hypothetical protein complement(157926..158957) Macrococcus caseolyticus JCSC5402 7390696 YP_002559559.1 CDS MCCL_0156 NC_011999.1 159037 160209 R similar to transporter protein; hypothetical protein complement(159037..160209) Macrococcus caseolyticus JCSC5402 7390900 YP_002559560.1 CDS MCCL_0157 NC_011999.1 160225 160650 R similar to transcription regulator MarR family; hypothetical protein complement(160225..160650) Macrococcus caseolyticus JCSC5402 7390901 YP_002559561.1 CDS gabD NC_011999.1 160764 162215 R succinate-semialdehyde dehydrogenase complement(160764..162215) Macrococcus caseolyticus JCSC5402 7390902 YP_002559562.1 CDS MCCL_0159 NC_011999.1 162341 163522 D similar to teicoplanin resistance associated membrane protein TcaB; hypothetical protein 162341..163522 Macrococcus caseolyticus JCSC5402 7390903 YP_002559563.1 CDS pbpD NC_011999.1 163643 164932 R penicillin-binding protein 4 complement(163643..164932) Macrococcus caseolyticus JCSC5402 7390584 YP_002559564.1 CDS MCCL_0161 NC_011999.1 165191 166396 D pyrimidine nucleoside transporter 165191..166396 Macrococcus caseolyticus JCSC5402 7390904 YP_002559565.1 CDS lctP NC_011999.1 166668 168263 D L-lactate permease 1 166668..168263 Macrococcus caseolyticus JCSC5402 7389804 YP_002559566.1 CDS lctD NC_011999.1 168291 169238 D L-lactate dehydrogenase 1 168291..169238 Macrococcus caseolyticus JCSC5402 7390905 YP_002559567.1 CDS MCCL_0164 NC_011999.1 169419 170252 D similar to functionally unknown protein; hypothetical protein 169419..170252 Macrococcus caseolyticus JCSC5402 7391155 YP_002559568.1 CDS MCCL_0165 NC_011999.1 170347 171387 R similar to thioredoxin reductase; hypothetical protein complement(170347..171387) Macrococcus caseolyticus JCSC5402 7391154 YP_002559569.1 CDS MCCL_0166 NC_011999.1 171494 172315 D cobalamin Fe3+-siderophore ABC transporter ATPase 171494..172315 Macrococcus caseolyticus JCSC5402 7390906 YP_002559570.1 CDS fhuB NC_011999.1 172308 173303 D ferrichrome transport permease 172308..173303 Macrococcus caseolyticus JCSC5402 7390907 YP_002559571.1 CDS MCCL_0168 NC_011999.1 173300 174307 D cobalamin Fe3+-siderophores ABC transporter permease 173300..174307 Macrococcus caseolyticus JCSC5402 7390908 YP_002559572.1 CDS MCCL_0169 NC_011999.1 174413 175462 D no similarity; hypothetical protein 174413..175462 Macrococcus caseolyticus JCSC5402 7390570 YP_002559573.1 CDS MCCL_0170 NC_011999.1 175475 177148 D alpha-glucosidase 175475..177148 Macrococcus caseolyticus JCSC5402 7390909 YP_002559574.1 CDS MCCL_0171 NC_011999.1 177225 177923 D similar to transcriptional regulator, GntR family; hypothetical protein 177225..177923 Macrococcus caseolyticus JCSC5402 7390910 YP_002559575.1 CDS MCCL_0172 NC_011999.1 178043 178780 D similar to Fe-S oxidoreductase; hypothetical protein 178043..178780 Macrococcus caseolyticus JCSC5402 7390911 YP_002559576.1 CDS MCCL_0173 NC_011999.1 178777 180210 D iron-sulfur cluster binding protein YvfW 178777..180210 Macrococcus caseolyticus JCSC5402 7390912 YP_002559577.1 CDS MCCL_0174 NC_011999.1 180210 180905 D similar to functionally unknown protein; hypothetical protein 180210..180905 Macrococcus caseolyticus JCSC5402 7390913 YP_002559578.1 CDS MCCL_0175 NC_011999.1 181013 181756 D similar to functionally unknown protein; hypothetical protein 181013..181756 Macrococcus caseolyticus JCSC5402 7389963 YP_002559579.1 CDS MCCL_0176 NC_011999.1 182083 183330 D FmhB protein, methicillin resistant factor 182083..183330 Macrococcus caseolyticus JCSC5402 7389964 YP_002559580.1 CDS MCCL_0177 NC_011999.1 183425 183739 R no similarity; hypothetical protein complement(183425..183739) Macrococcus caseolyticus JCSC5402 7389965 YP_002559581.1 CDS mmsB NC_011999.1 183817 184674 D 3-hydroxyisobutyrate dehydrogenase 183817..184674 Macrococcus caseolyticus JCSC5402 7389966 YP_002559582.1 CDS MCCL_0179 NC_011999.1 184745 187927 D similar to cation multidrug efflux pump; hypothetical protein 184745..187927 Macrococcus caseolyticus JCSC5402 7389967 YP_002559583.1 CDS MCCL_0180 NC_011999.1 188150 189313 D similar to aminotransferase family protein; hypothetical protein 188150..189313 Macrococcus caseolyticus JCSC5402 7390687 YP_002559584.1 CDS MCCL_0181 NC_011999.1 189348 189665 R similar to functionally unknown protein; hypothetical protein complement(189348..189665) Macrococcus caseolyticus JCSC5402 7389968 YP_002559585.1 CDS MCCL_0182 NC_011999.1 189662 190807 R similar to multidrug-efflux transporter; hypothetical protein complement(189662..190807) Macrococcus caseolyticus JCSC5402 7389969 YP_002559586.1 CDS MCCL_0183 NC_011999.1 191133 191612 D similar to functionally unknown protein; hypothetical protein 191133..191612 Macrococcus caseolyticus JCSC5402 7389970 YP_002559587.1 CDS MCCL_0184 NC_011999.1 191602 192663 D serine/threonine protein phosphatase 191602..192663 Macrococcus caseolyticus JCSC5402 7389971 YP_002559588.1 CDS MCCL_0185 NC_011999.1 192697 193602 D similar to functionally unknown protein; hypothetical protein 192697..193602 Macrococcus caseolyticus JCSC5402 7389972 YP_002559589.1 CDS MCCL_0186 NC_011999.1 193641 194426 R glucose-1-dehydrogenase complement(193641..194426) Macrococcus caseolyticus JCSC5402 7389973 YP_002559590.1 CDS MCCL_0187 NC_011999.1 194440 195291 R similar to glucose uptake protein; hypothetical protein complement(194440..195291) Macrococcus caseolyticus JCSC5402 7389974 YP_002559591.1 CDS MCCL_0188 NC_011999.1 195425 196312 R similar to functionally unknown protein; hypothetical protein complement(195425..196312) Macrococcus caseolyticus JCSC5402 7389975 YP_002559592.1 CDS topB NC_011999.1 196521 198647 D decatenates replicating daughter chromosomes; DNA topoisomerase III 196521..198647 Macrococcus caseolyticus JCSC5402 7389976 YP_002559593.1 CDS MCCL_0190 NC_011999.1 198769 200238 D anion transporter family protein 198769..200238 Macrococcus caseolyticus JCSC5402 7389977 YP_002559594.1 CDS MCCL_0191 NC_011999.1 200282 200998 R similar to functionally unknown protein; hypothetical protein complement(200282..200998) Macrococcus caseolyticus JCSC5402 7390479 YP_002559595.1 CDS MCCL_0192 NC_011999.1 201254 202588 D xanthine/uracil permeases family protein 201254..202588 Macrococcus caseolyticus JCSC5402 7389978 YP_002559596.1 CDS MCCL_0193 NC_011999.1 202628 203032 R similar to functionally unknown protein; hypothetical protein complement(202628..203032) Macrococcus caseolyticus JCSC5402 7389979 YP_002559597.1 CDS rpsJ NC_011999.1 203432 203740 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 203432..203740 Macrococcus caseolyticus JCSC5402 7389980 YP_002559598.1 CDS rplC NC_011999.1 203766 204428 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 203766..204428 Macrococcus caseolyticus JCSC5402 7389981 YP_002559599.1 CDS rplD NC_011999.1 204455 205078 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 204455..205078 Macrococcus caseolyticus JCSC5402 7389555 YP_002559600.1 CDS rplW NC_011999.1 205078 205353 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 205078..205353 Macrococcus caseolyticus JCSC5402 7389516 YP_002559601.1 CDS rplB NC_011999.1 205388 206218 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 205388..206218 Macrococcus caseolyticus JCSC5402 7389517 YP_002559602.1 CDS rpsS NC_011999.1 206284 206562 D 30S ribosomal protein S19 206284..206562 Macrococcus caseolyticus JCSC5402 7389534 YP_002559603.1 CDS rplV NC_011999.1 206585 206959 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 206585..206959 Macrococcus caseolyticus JCSC5402 7389515 YP_002559604.1 CDS rpsC NC_011999.1 206985 207638 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 206985..207638 Macrococcus caseolyticus JCSC5402 7389561 YP_002559605.1 CDS rplP NC_011999.1 207641 208075 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 207641..208075 Macrococcus caseolyticus JCSC5402 7389533 YP_002559606.1 CDS rpmC NC_011999.1 208053 208277 D 50S ribosomal protein L29 208053..208277 Macrococcus caseolyticus JCSC5402 7389549 YP_002559607.1 CDS rpsQ NC_011999.1 208300 208563 D 30S ribosomal protein S17 208300..208563 Macrococcus caseolyticus JCSC5402 7389527 YP_002559608.1 CDS rplN NC_011999.1 208593 208961 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 208593..208961 Macrococcus caseolyticus JCSC5402 7389537 YP_002559609.1 CDS rplX NC_011999.1 208993 209301 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 208993..209301 Macrococcus caseolyticus JCSC5402 7389560 YP_002559610.1 CDS rplE NC_011999.1 209325 209864 D 50S ribosomal protein L5 209325..209864 Macrococcus caseolyticus JCSC5402 7389525 YP_002559611.1 CDS rpsN NC_011999.1 209893 210078 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 209893..210078 Macrococcus caseolyticus JCSC5402 7389535 YP_002559612.1 CDS rpsH NC_011999.1 210108 210506 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 210108..210506 Macrococcus caseolyticus JCSC5402 7389518 YP_002559613.1 CDS rplF NC_011999.1 210536 211072 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 210536..211072 Macrococcus caseolyticus JCSC5402 7389559 YP_002559614.1 CDS rplR NC_011999.1 211100 211462 D 50S ribosomal protein L18 211100..211462 Macrococcus caseolyticus JCSC5402 7389553 YP_002559615.1 CDS rpsE NC_011999.1 211481 211978 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 211481..211978 Macrococcus caseolyticus JCSC5402 7389519 YP_002559616.1 CDS rpmD NC_011999.1 211993 212172 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 211993..212172 Macrococcus caseolyticus JCSC5402 7389529 YP_002559617.1 CDS rplO NC_011999.1 212202 212642 D 50S ribosomal protein L15 212202..212642 Macrococcus caseolyticus JCSC5402 7389551 YP_002559618.1 CDS secY NC_011999.1 212642 213931 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 212642..213931 Macrococcus caseolyticus JCSC5402 7389538 YP_002559619.1 CDS adk NC_011999.1 213949 214596 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 213949..214596 Macrococcus caseolyticus JCSC5402 7389526 YP_002559620.1 CDS infA NC_011999.1 214953 215171 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 214953..215171 Macrococcus caseolyticus JCSC5402 7389577 YP_002559621.1 CDS rpmJ NC_011999.1 215207 215320 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 215207..215320 Macrococcus caseolyticus JCSC5402 7390178 YP_002559622.1 CDS rpsM NC_011999.1 215340 215705 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 215340..215705 Macrococcus caseolyticus JCSC5402 7391143 YP_002559623.1 CDS rpsK NC_011999.1 215726 216115 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 215726..216115 Macrococcus caseolyticus JCSC5402 7389541 YP_002559624.1 CDS rpoA NC_011999.1 216196 217140 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 216196..217140 Macrococcus caseolyticus JCSC5402 7389558 YP_002559625.1 CDS rplQ NC_011999.1 217159 217527 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 217159..217527 Macrococcus caseolyticus JCSC5402 7389556 YP_002559626.1 CDS MCCL_0223 NC_011999.1 217819 218616 D ABC transporter ATP-binding protein 217819..218616 Macrococcus caseolyticus JCSC5402 7389542 YP_002559627.1 CDS MCCL_0224 NC_011999.1 218613 219467 D similar to ABC transporter ATP-binding protein; hypothetical protein 218613..219467 Macrococcus caseolyticus JCSC5402 7389528 YP_002559628.1 CDS MCCL_0225 NC_011999.1 219460 220257 D cobalt ABC transporter permease 219460..220257 Macrococcus caseolyticus JCSC5402 7389982 YP_002559629.1 CDS truA NC_011999.1 220267 221088 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 220267..221088 Macrococcus caseolyticus JCSC5402 7389983 YP_002559630.1 CDS rplM NC_011999.1 221273 221710 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 221273..221710 Macrococcus caseolyticus JCSC5402 7389984 YP_002559631.1 CDS rpsI NC_011999.1 221730 222122 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 221730..222122 Macrococcus caseolyticus JCSC5402 7390485 YP_002559632.1 CDS MCCL_0229 NC_011999.1 222232 222729 R similar to functionally unknown protein; hypothetical protein complement(222232..222729) Macrococcus caseolyticus JCSC5402 7389524 YP_002559633.1 CDS int NC_011999.1 222741 223907 R integrase complement(222741..223907) Macrococcus caseolyticus JCSC5402 7389554 YP_002559634.1 CDS MCCL_0231 NC_011999.1 223946 224758 R no similarity; hypothetical protein complement(223946..224758) Macrococcus caseolyticus JCSC5402 7389985 YP_002559635.1 CDS MCCL_0232 NC_011999.1 225171 226220 D similar to ORF012 of Bacteriophage 37; hypothetical protein 225171..226220 Macrococcus caseolyticus JCSC5402 7391146 YP_002559636.1 CDS MCCL_0233 NC_011999.1 226815 227165 D no similarity; hypothetical protein 226815..227165 Macrococcus caseolyticus JCSC5402 7389986 YP_002559637.1 CDS hsdM NC_011999.1 227997 229874 D type III restriction-modification system methyltransferase subunit 227997..229874 Macrococcus caseolyticus JCSC5402 7389987 YP_002559638.1 CDS hsdR NC_011999.1 229877 232843 D type III restriction-modification system restriction endonuclease subunit 229877..232843 Macrococcus caseolyticus JCSC5402 7389988 YP_002559639.1 CDS MCCL_0236 NC_011999.1 232867 236499 D similar to functionally unknown protein; hypothetical protein 232867..236499 Macrococcus caseolyticus JCSC5402 7391129 YP_002559640.1 CDS tnp NC_011999.1 236934 237893 D most similar to IS30 family; transposase 236934..237893 Macrococcus caseolyticus JCSC5402 7391131 YP_002559641.1 CDS MCCL_0238 NC_011999.1 237827 238297 R similar to fusidic acid resistance protein; hypothetical protein complement(237827..238297) Macrococcus caseolyticus JCSC5402 7389989 YP_002559642.1 CDS MCCL_0239 NC_011999.1 238845 239984 R similar to functionally unknown protein; hypothetical protein complement(238845..239984) Macrococcus caseolyticus JCSC5402 7390474 YP_002559643.1 CDS MCCL_0240 NC_011999.1 239984 240826 R similar to functionally unknown protein; hypothetical protein complement(239984..240826) Macrococcus caseolyticus JCSC5402 7389990 YP_002559644.1 CDS MCCL_0241 NC_011999.1 241184 241744 R similar to functionally unknown protein; hypothetical protein complement(241184..241744) Macrococcus caseolyticus JCSC5402 7389991 YP_002559645.1 CDS MCCL_0242 NC_011999.1 242069 242407 R integrase complement(242069..242407) Macrococcus caseolyticus JCSC5402 7389992 YP_002559646.1 CDS MCCL_0243 NC_011999.1 242655 244760 D cation-transporting ATPase E1-E2 family protein 242655..244760 Macrococcus caseolyticus JCSC5402 7389993 YP_002559647.1 CDS MCCL_0244 NC_011999.1 245512 246054 D similar to functionally unknown protein; hypothetical protein 245512..246054 Macrococcus caseolyticus JCSC5402 7389994 YP_002559648.1 CDS MCCL_0245 NC_011999.1 246319 246795 R no similarity; hypothetical protein complement(246319..246795) Macrococcus caseolyticus JCSC5402 7389995 YP_002559649.1 CDS MCCL_0246 NC_011999.1 246922 247929 D peptidase U61, LD-carboxypeptidase A 246922..247929 Macrococcus caseolyticus JCSC5402 7389996 YP_002559650.1 CDS MCCL_0247 NC_011999.1 248194 248679 D similar to histone acetyltransferase HPA2; hypothetical protein 248194..248679 Macrococcus caseolyticus JCSC5402 7389997 YP_002559651.1 CDS MCCL_0248 NC_011999.1 248910 249260 D similar to functionally unknown protein; hypothetical protein 248910..249260 Macrococcus caseolyticus JCSC5402 7389998 YP_002559652.1 CDS MCCL_0249 NC_011999.1 249379 250590 D NADH:flavin oxidoreductase 249379..250590 Macrococcus caseolyticus JCSC5402 7389999 YP_002559653.1 CDS MCCL_0250 NC_011999.1 250674 252107 D similar to functionally unknown protein; hypothetical protein 250674..252107 Macrococcus caseolyticus JCSC5402 7390000 YP_002559654.1 CDS MCCL_0251 NC_011999.1 252202 253380 D oxidoreductase family protein 252202..253380 Macrococcus caseolyticus JCSC5402 7390001 YP_002559655.1 CDS MCCL_0252 NC_011999.1 253622 255247 D similar to DNA mismatch repair protein MutS; hypothetical protein 253622..255247 Macrococcus caseolyticus JCSC5402 7390002 YP_002559656.1 CDS MCCL_0253 NC_011999.1 255519 256037 D no similarity; hypothetical protein 255519..256037 Macrococcus caseolyticus JCSC5402 7390003 YP_002559657.1 CDS MCCL_0254 NC_011999.1 256309 257127 D similar to ABC transporter substrate-binding protein; hypothetical protein 256309..257127 Macrococcus caseolyticus JCSC5402 7390004 YP_002559658.1 CDS MCCL_0255 NC_011999.1 257128 258039 D lactate dehydrogenase 257128..258039 Macrococcus caseolyticus JCSC5402 7390005 YP_002559659.1 CDS MCCL_0256 NC_011999.1 258129 259196 D no similarity; hypothetical protein 258129..259196 Macrococcus caseolyticus JCSC5402 7390006 YP_002559660.1 CDS MCCL_0257 NC_011999.1 259287 259838 D similar to functionally unknown protein; hypothetical protein 259287..259838 Macrococcus caseolyticus JCSC5402 7390007 YP_002559661.1 CDS MCCL_0258 NC_011999.1 259954 261108 D sulfate permease 259954..261108 Macrococcus caseolyticus JCSC5402 7390008 YP_002559662.1 CDS MCCL_0259 NC_011999.1 261109 261504 D similar to universal stress protein family; hypothetical protein 261109..261504 Macrococcus caseolyticus JCSC5402 7390009 YP_002559663.1 CDS MCCL_0260 NC_011999.1 261554 262804 R transcriptional regulator family protein complement(261554..262804) Macrococcus caseolyticus JCSC5402 7390010 YP_002559664.1 CDS metE NC_011999.1 263521 264678 D methionine synthase II 263521..264678 Macrococcus caseolyticus JCSC5402 7390011 YP_002559665.1 CDS msrA NC_011999.1 265027 265494 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A 265027..265494 Macrococcus caseolyticus JCSC5402 7390012 YP_002559666.1 CDS MCCL_0263 NC_011999.1 265998 268373 D copper-transporting ATPase 265998..268373 Macrococcus caseolyticus JCSC5402 7390682 YP_002559667.1 CDS MCCL_0264 NC_011999.1 268702 269751 D oxidoreductase family protein 268702..269751 Macrococcus caseolyticus JCSC5402 7390710 YP_002559668.1 CDS MCCL_0265 NC_011999.1 269729 270343 D similar to functionally unknown protein; hypothetical protein 269729..270343 Macrococcus caseolyticus JCSC5402 7390013 YP_002559669.1 CDS MCCL_0266 NC_011999.1 270395 270961 D similar to functionally unknown protein; hypothetical protein 270395..270961 Macrococcus caseolyticus JCSC5402 7390014 YP_002559670.1 CDS MCCL_0267 NC_011999.1 270985 272379 R sodium-glutamate symporter complement(270985..272379) Macrococcus caseolyticus JCSC5402 7390015 YP_002559671.1 CDS MCCL_0268 NC_011999.1 272836 273687 R similar to functionally unknown protein; hypothetical protein complement(272836..273687) Macrococcus caseolyticus JCSC5402 7390016 YP_002559672.1 CDS MCCL_0269 NC_011999.1 273756 274508 R similar to transcriptional regulator, MerR family protein; hypothetical protein complement(273756..274508) Macrococcus caseolyticus JCSC5402 7390017 YP_002559673.1 CDS MCCL_0270 NC_011999.1 274602 275255 D no similarity; hypothetical protein 274602..275255 Macrococcus caseolyticus JCSC5402 7390018 YP_002559674.1 CDS MCCL_0271 NC_011999.1 275271 275750 D similar to functionally unknown protein; hypothetical protein 275271..275750 Macrococcus caseolyticus JCSC5402 7390019 YP_002559675.1 CDS MCCL_0272 NC_011999.1 275828 276385 D similar to acetyltransferase family protein; hypothetical protein 275828..276385 Macrococcus caseolyticus JCSC5402 7390020 YP_002559676.1 CDS MCCL_0273 NC_011999.1 276761 277903 D similar to chloramphenicol resistance protein; hypothetical protein 276761..277903 Macrococcus caseolyticus JCSC5402 7390021 YP_002559677.1 CDS MCCL_0274 NC_011999.1 277924 278322 R similar to functionally unknown protein; hypothetical protein complement(277924..278322) Macrococcus caseolyticus JCSC5402 7390022 YP_002559678.1 CDS MCCL_0275 NC_011999.1 278337 278696 R similar to functionally unknown protein; hypothetical protein complement(278337..278696) Macrococcus caseolyticus JCSC5402 7390023 YP_002559679.1 CDS MCCL_0276 NC_011999.1 278877 279245 D similar to functionally unknown protein; hypothetical protein 278877..279245 Macrococcus caseolyticus JCSC5402 7390024 YP_002559680.1 CDS MCCL_0277 NC_011999.1 279255 280277 R sugar-binding transcriptional regulator LacI family protein complement(279255..280277) Macrococcus caseolyticus JCSC5402 7390025 YP_002559681.1 CDS MCCL_0278 NC_011999.1 280442 282610 D sugar-specific permease EIIA 1 domain 280442..282610 Macrococcus caseolyticus JCSC5402 7390026 YP_002559682.1 CDS MCCL_0279 NC_011999.1 282679 283500 D similar to endonuclease/exonuclease/phosphatase family protein; hypothetical protein 282679..283500 Macrococcus caseolyticus JCSC5402 7390027 YP_002559683.1 CDS MCCL_0280 NC_011999.1 283579 284241 D two-component response regulator 283579..284241 Macrococcus caseolyticus JCSC5402 7390028 YP_002559684.1 CDS MCCL_0281 NC_011999.1 284241 285137 D sensor histidine kinase 284241..285137 Macrococcus caseolyticus JCSC5402 7390029 YP_002559685.1 CDS MCCL_0282 NC_011999.1 285232 285981 D ABC transporter ATP-binding protein 285232..285981 Macrococcus caseolyticus JCSC5402 7390030 YP_002559686.1 CDS MCCL_0283 NC_011999.1 285983 287944 D similar to ABC transporter permease; hypothetical protein 285983..287944 Macrococcus caseolyticus JCSC5402 7390031 YP_002559687.1 CDS MCCL_0284 NC_011999.1 288321 290183 R similar to cadmium transporting P-type ATPase; hypothetical protein complement(288321..290183) Macrococcus caseolyticus JCSC5402 7390032 YP_002559688.1 CDS MCCL_0285 NC_011999.1 290260 290928 R similar to cAMP-binding proteins, regulatory subunit of cAMP-dependent protein kinases; hypothetical protein complement(290260..290928) Macrococcus caseolyticus JCSC5402 7390033 YP_002559689.1 CDS ppsA NC_011999.1 291133 293706 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 291133..293706 Macrococcus caseolyticus JCSC5402 7390034 YP_002559690.1 CDS MCCL_0287 NC_011999.1 293725 294546 D similar to functionally unknown protein; hypothetical protein 293725..294546 Macrococcus caseolyticus JCSC5402 7390035 YP_002559691.1 CDS MCCL_0288 NC_011999.1 294643 295959 D amino acid permease 294643..295959 Macrococcus caseolyticus JCSC5402 7389835 YP_002559692.1 CDS MCCL_0289 NC_011999.1 296206 297012 D similar to divalent cation transporter; hypothetical protein 296206..297012 Macrococcus caseolyticus JCSC5402 7390036 YP_002559693.1 CDS MCCL_0290 NC_011999.1 298049 298996 R similar to functionally unknown protein; hypothetical protein complement(298049..298996) Macrococcus caseolyticus JCSC5402 7390037 YP_002559694.1 CDS MCCL_0291 NC_011999.1 299590 300462 D ABC transporter ATPase 299590..300462 Macrococcus caseolyticus JCSC5402 7390038 YP_002559695.1 CDS MCCL_0292 NC_011999.1 300440 301183 D ABC transporter permease 300440..301183 Macrococcus caseolyticus JCSC5402 7390039 YP_002559696.1 CDS MCCL_0293 NC_011999.1 301183 302235 D similar to sensor histidine kinase; hypothetical protein 301183..302235 Macrococcus caseolyticus JCSC5402 7390040 YP_002559697.1 CDS MCCL_0294 NC_011999.1 302274 302852 D similar to two-component response regulator; hypothetical protein 302274..302852 Macrococcus caseolyticus JCSC5402 7390041 YP_002559698.1 CDS MCCL_0295 NC_011999.1 303223 303621 D similar to murein hydrolase exporter; hypothetical protein 303223..303621 Macrococcus caseolyticus JCSC5402 7390042 YP_002559699.1 CDS MCCL_0296 NC_011999.1 303618 304289 D similar to effector of murein hydrolase; hypothetical protein 303618..304289 Macrococcus caseolyticus JCSC5402 7390043 YP_002559700.1 CDS MCCL_0297 NC_011999.1 304362 304778 D no similarity; hypothetical protein 304362..304778 Macrococcus caseolyticus JCSC5402 7390044 YP_002559701.1 CDS MCCL_0298 NC_011999.1 304994 306709 D thiamine biosynthesis protein ThiC 304994..306709 Macrococcus caseolyticus JCSC5402 7390914 YP_002559702.1 CDS MCCL_0299 NC_011999.1 306785 307288 R similar to functionally unknown protein; hypothetical protein complement(306785..307288) Macrococcus caseolyticus JCSC5402 7390997 YP_002559703.1 CDS MCCL_0300 NC_011999.1 307503 308033 D similar to DNA-3-methyladenine glycosidase; hypothetical protein 307503..308033 Macrococcus caseolyticus JCSC5402 7390998 YP_002559704.1 CDS MCCL_0301 NC_011999.1 308071 309198 R similar to chloramphenicol resistance protein; hypothetical protein complement(308071..309198) Macrococcus caseolyticus JCSC5402 7390999 YP_002559705.1 CDS MCCL_0302 NC_011999.1 309374 309874 D similar to acetyltransferase; hypothetical protein 309374..309874 Macrococcus caseolyticus JCSC5402 7391000 YP_002559706.1 CDS MCCL_0303 NC_011999.1 310140 311471 D similar to functionally unknown protein; hypothetical protein 310140..311471 Macrococcus caseolyticus JCSC5402 7391001 YP_002559707.1 CDS MCCL_0304 NC_011999.1 311567 311878 R similar to functionally unknown protein; hypothetical protein complement(311567..311878) Macrococcus caseolyticus JCSC5402 7391002 YP_002559708.1 CDS MCCL_0305 NC_011999.1 311889 312605 R similar to short-chain dehydrogenase/reductase; hypothetical protein complement(311889..312605) Macrococcus caseolyticus JCSC5402 7391003 YP_002559709.1 CDS MCCL_0306 NC_011999.1 313148 314302 D similar to cyanate transporter; hypothetical protein 313148..314302 Macrococcus caseolyticus JCSC5402 7391004 YP_002559710.1 CDS MCCL_0307 NC_011999.1 314368 315267 R similar to chloramphenicol-sensitive protein rarD; hypothetical protein complement(314368..315267) Macrococcus caseolyticus JCSC5402 7391005 YP_002559711.1 CDS MCCL_0308 NC_011999.1 315393 316037 D no similarity; hypothetical protein 315393..316037 Macrococcus caseolyticus JCSC5402 7391006 YP_002559712.1 CDS MCCL_0309 NC_011999.1 316198 316704 D similar to functionally unknown protein; hypothetical protein 316198..316704 Macrococcus caseolyticus JCSC5402 7391007 YP_002559713.1 CDS MCCL_0310 NC_011999.1 316717 317895 D similar to UTP--glucose-1-phosphate uridylyltransferase; hypothetical protein 316717..317895 Macrococcus caseolyticus JCSC5402 7391008 YP_002559714.1 CDS MCCL_0311 NC_011999.1 318229 319146 D similar to functionally unknown protein; hypothetical protein 318229..319146 Macrococcus caseolyticus JCSC5402 7391009 YP_002559715.1 CDS MCCL_0312 NC_011999.1 319358 320296 D similar to functionally unknown protein; hypothetical protein 319358..320296 Macrococcus caseolyticus JCSC5402 7391010 YP_002559716.1 CDS MCCL_0313 NC_011999.1 320379 320849 D similar to functionally unknown protein; hypothetical protein 320379..320849 Macrococcus caseolyticus JCSC5402 7391011 YP_002559717.1 CDS MCCL_0314 NC_011999.1 320944 322395 R converts 1,4-alpha-D-glucans to maltodextrin; cytoplasmic alpha-amylase complement(320944..322395) Macrococcus caseolyticus JCSC5402 7391012 YP_002559718.1 CDS MCCL_0315 NC_011999.1 322550 323602 D Mrp/Nbp35 family ATP-binding protein 322550..323602 Macrococcus caseolyticus JCSC5402 7391013 YP_002559719.1 CDS MCCL_0316 NC_011999.1 323620 324336 D similar to signaling pathway activation protein KinB; hypothetical protein 323620..324336 Macrococcus caseolyticus JCSC5402 7391014 YP_002559720.1 CDS MCCL_0317 NC_011999.1 324393 325691 D similar to permease of major facilitator superfamily; hypothetical protein 324393..325691 Macrococcus caseolyticus JCSC5402 7391015 YP_002559721.1 CDS MCCL_0318 NC_011999.1 332057 332962 D arginase 332057..332962 Macrococcus caseolyticus JCSC5402 7390130 YP_002559722.1 CDS MCCL_0319 NC_011999.1 333106 334062 D cation efflux family protein 333106..334062 Macrococcus caseolyticus JCSC5402 7390131 YP_002559723.1 CDS MCCL_0320 NC_011999.1 334070 334516 R similar to transcriptional regulator, ArsR family; hypothetical protein complement(334070..334516) Macrococcus caseolyticus JCSC5402 7391018 YP_002559724.1 CDS MCCL_0321 NC_011999.1 334855 335664 D similar to functionally unknown protein; hypothetical protein 334855..335664 Macrococcus caseolyticus JCSC5402 7391019 YP_002559725.1 CDS MCCL_0322 NC_011999.1 335664 336599 D similar to functionally unknown protein; hypothetical protein 335664..336599 Macrococcus caseolyticus JCSC5402 7391020 YP_002559726.1 CDS glmM NC_011999.1 336612 337958 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 336612..337958 Macrococcus caseolyticus JCSC5402 7391021 YP_002559727.1 CDS MCCL_0324 NC_011999.1 338377 340179 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 338377..340179 Macrococcus caseolyticus JCSC5402 7391022 YP_002559728.1 CDS MCCL_0325 NC_011999.1 340385 341122 D thermostable monoacylglycerol lipase 340385..341122 Macrococcus caseolyticus JCSC5402 7391023 YP_002559729.1 CDS MCCL_0326 NC_011999.1 341195 341827 D similar to endonuclease III; hypothetical protein 341195..341827 Macrococcus caseolyticus JCSC5402 7391024 YP_002559730.1 CDS MCCL_0327 NC_011999.1 341822 343903 R similar to RecA/RadA recombinase family protein; hypothetical protein complement(341822..343903) Macrococcus caseolyticus JCSC5402 7391025 YP_002559731.1 CDS MCCL_0328 NC_011999.1 343983 344363 D no similarity; hypothetical protein 343983..344363 Macrococcus caseolyticus JCSC5402 7391026 YP_002559732.1 CDS MCCL_0329 NC_011999.1 345247 346587 D similar to amino acid permease; hypothetical protein 345247..346587 Macrococcus caseolyticus JCSC5402 7391027 YP_002559733.1 CDS mmuM NC_011999.1 346571 347458 D converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 346571..347458 Macrococcus caseolyticus JCSC5402 7391028 YP_002559734.1 CDS MCCL_0331 NC_011999.1 347404 348144 D similar to functionally unknown protein; hypothetical protein 347404..348144 Macrococcus caseolyticus JCSC5402 7391029 YP_002559735.1 CDS MCCL_0332 NC_011999.1 348223 349152 D similar to sugar kinase family protein; hypothetical protein 348223..349152 Macrococcus caseolyticus JCSC5402 7391030 YP_002559736.1 CDS MCCL_0333 NC_011999.1 349340 349534 D no similarity; hypothetical protein 349340..349534 Macrococcus caseolyticus JCSC5402 7391031 YP_002559737.1 CDS MCCL_0334 NC_011999.1 349689 351350 R similar to functionally unknown protein; hypothetical protein complement(349689..351350) Macrococcus caseolyticus JCSC5402 7391032 YP_002559738.1 CDS MCCL_0335 NC_011999.1 351474 353162 D similar to functionally unknown protein; hypothetical protein 351474..353162 Macrococcus caseolyticus JCSC5402 7391033 YP_002559739.1 CDS MCCL_0336 NC_011999.1 353128 353439 D similar to functionally unknown protein; hypothetical protein 353128..353439 Macrococcus caseolyticus JCSC5402 7391034 YP_002559740.1 CDS MCCL_0337 NC_011999.1 353754 355376 D similar to RNA-directed DNA polymerase; hypothetical protein 353754..355376 Macrococcus caseolyticus JCSC5402 7391035 YP_002559741.1 CDS MCCL_0338 NC_011999.1 355491 356309 D similar to phosphohydrolases, Icc family; hypothetical protein 355491..356309 Macrococcus caseolyticus JCSC5402 7391036 YP_002559742.1 CDS MCCL_0339 NC_011999.1 356316 357032 D similar to lactose phosphotransferase system repressor; hypothetical protein 356316..357032 Macrococcus caseolyticus JCSC5402 7391037 YP_002559743.1 CDS MCCL_0340 NC_011999.1 357193 358278 D ABC transporter substrate-binding protein 357193..358278 Macrococcus caseolyticus JCSC5402 7391038 YP_002559744.1 CDS MCCL_0341 NC_011999.1 358333 359175 D ABC transporter permease 358333..359175 Macrococcus caseolyticus JCSC5402 7391039 YP_002559745.1 CDS MCCL_0342 NC_011999.1 359172 359966 D similar to ABC transporter permease; hypothetical protein 359172..359966 Macrococcus caseolyticus JCSC5402 7391040 YP_002559746.1 CDS MCCL_0343 NC_011999.1 359947 360945 D similar to ABC transporter ATP-binding protein; hypothetical protein 359947..360945 Macrococcus caseolyticus JCSC5402 7391041 YP_002559747.1 CDS MCCL_0344 NC_011999.1 360959 361966 D catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 360959..361966 Macrococcus caseolyticus JCSC5402 7391042 YP_002559748.1 CDS MCCL_0345 NC_011999.1 362056 362991 R similar to ornithine cyclodeaminase; hypothetical protein complement(362056..362991) Macrococcus caseolyticus JCSC5402 7391043 YP_002559749.1 CDS MCCL_0346 NC_011999.1 363002 364267 R similar to functionally unknown protein; hypothetical protein complement(363002..364267) Macrococcus caseolyticus JCSC5402 7391044 YP_002559750.1 CDS MCCL_0347 NC_011999.1 364436 364939 D similar to transcriptional regulator, XRE family; hypothetical protein 364436..364939 Macrococcus caseolyticus JCSC5402 7391045 YP_002559751.1 CDS MCCL_0348 NC_011999.1 365180 366148 D similar to transcriptional repressor of ribose operon; hypothetical protein 365180..366148 Macrococcus caseolyticus JCSC5402 7391046 YP_002559752.1 CDS MCCL_0349 NC_011999.1 366120 367019 D ribokinase 366120..367019 Macrococcus caseolyticus JCSC5402 7391047 YP_002559753.1 CDS MCCL_0350 NC_011999.1 367012 367638 D no similarity; hypothetical protein 367012..367638 Macrococcus caseolyticus JCSC5402 7391048 YP_002559754.1 CDS MCCL_0351 NC_011999.1 367651 368619 D similar to aldose 1-epimerase; hypothetical protein 367651..368619 Macrococcus caseolyticus JCSC5402 7391049 YP_002559755.1 CDS MCCL_0352 NC_011999.1 368878 369606 R frameshiftedornithine cyclodeaminase complement(368878..369606) Macrococcus caseolyticus JCSC5402 7391050 YP_002559756.1 CDS MCCL_0353 NC_011999.1 370039 371331 D multiple sugar-binding transporter, binding protein 370039..371331 Macrococcus caseolyticus JCSC5402 7391051 YP_002559757.1 CDS MCCL_0354 NC_011999.1 371389 372255 D multiple sugar-binding transporter, permease 371389..372255 Macrococcus caseolyticus JCSC5402 7391052 YP_002559758.1 CDS MCCL_0355 NC_011999.1 372255 373067 D multiple sugar-binding transporter permease 372255..373067 Macrococcus caseolyticus JCSC5402 7391053 YP_002559759.1 CDS MCCL_0356 NC_011999.1 373068 374078 D similar to transcriptional regulator; hypothetical protein 373068..374078 Macrococcus caseolyticus JCSC5402 7391054 YP_002559760.1 CDS MCCL_0357 NC_011999.1 374075 374788 D trehalose utilization protein 374075..374788 Macrococcus caseolyticus JCSC5402 7391055 YP_002559761.1 CDS MCCL_0358 NC_011999.1 374790 375806 D NADH-dependent dyhydrogenase family protein 374790..375806 Macrococcus caseolyticus JCSC5402 7391056 YP_002559762.1 CDS MCCL_0359 NC_011999.1 375807 376853 D NADH-dependent dehydrogenase family protein 375807..376853 Macrococcus caseolyticus JCSC5402 7391057 YP_002559763.1 CDS MCCL_0360 NC_011999.1 376866 377834 D similar to functionally unknown protein; hypothetical protein 376866..377834 Macrococcus caseolyticus JCSC5402 7391058 YP_002559764.1 CDS MCCL_0361 NC_011999.1 377845 378945 D multiple sugar-binding transport ATP-binding protein 377845..378945 Macrococcus caseolyticus JCSC5402 7391059 YP_002559765.1 CDS MCCL_0362 NC_011999.1 378986 380644 D alpha-glucosidase 378986..380644 Macrococcus caseolyticus JCSC5402 7391060 YP_002559766.1 CDS MCCL_0363 NC_011999.1 381114 382613 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(381114..382613) Macrococcus caseolyticus JCSC5402 7391061 YP_002559767.1 CDS MCCL_0364 NC_011999.1 383408 386716 D no similarity; hypothetical protein 383408..386716 Macrococcus caseolyticus JCSC5402 7391062 YP_002559768.1 CDS MCCL_0365 NC_011999.1 386768 388243 D similar to functionally unknown protein; hypothetical protein 386768..388243 Macrococcus caseolyticus JCSC5402 7391063 YP_002559769.1 CDS MCCL_0366 NC_011999.1 388304 389173 D similar to sortase; hypothetical protein 388304..389173 Macrococcus caseolyticus JCSC5402 7391064 YP_002559770.1 CDS MCCL_0367 NC_011999.1 389170 389982 D similar to sortase; hypothetical protein 389170..389982 Macrococcus caseolyticus JCSC5402 7391065 YP_002559771.1 CDS MCCL_0368 NC_011999.1 390492 391502 D similar to Mn2+/Fe2+ transporter; hypothetical protein 390492..391502 Macrococcus caseolyticus JCSC5402 7391066 YP_002559772.1 CDS MCCL_0369 NC_011999.1 392086 393273 R similar to carboxypeptidase; hypothetical protein complement(392086..393273) Macrococcus caseolyticus JCSC5402 7391067 YP_002559773.1 CDS MCCL_0370 NC_011999.1 393557 394915 D glycerol-3-phosphate transporter 393557..394915 Macrococcus caseolyticus JCSC5402 7391068 YP_002559774.1 CDS MCCL_0371 NC_011999.1 394940 396016 D SN-glycerol-3-phosphate ABC transporter ATP-binding protein 394940..396016 Macrococcus caseolyticus JCSC5402 7391069 YP_002559775.1 CDS MCCL_0372 NC_011999.1 396081 397049 D similar to transcriptional regulator; hypothetical protein 396081..397049 Macrococcus caseolyticus JCSC5402 7391070 YP_002559776.1 CDS MCCL_0373 NC_011999.1 397130 398626 D sucrose-6-phosphate hydrolase 397130..398626 Macrococcus caseolyticus JCSC5402 7391071 YP_002559777.1 CDS MCCL_0374 NC_011999.1 398593 399540 D similar to fructokinase; hypothetical protein 398593..399540 Macrococcus caseolyticus JCSC5402 7391072 YP_002559778.1 CDS MCCL_0375 NC_011999.1 399542 400960 D PTS system, trehalose-specific enzyme II, BC component 399542..400960 Macrococcus caseolyticus JCSC5402 7391073 YP_002559779.1 CDS MCCL_0376 NC_011999.1 401082 402074 D catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 401082..402074 Macrococcus caseolyticus JCSC5402 7391074 YP_002559780.1 CDS MCCL_0377 NC_011999.1 402083 404152 R similar to ATP-dependent DNA helicase RecQ; hypothetical protein complement(402083..404152) Macrococcus caseolyticus JCSC5402 7391075 YP_002559781.1 CDS MCCL_0378 NC_011999.1 404498 404821 D no similarity; hypothetical protein 404498..404821 Macrococcus caseolyticus JCSC5402 7391076 YP_002559782.1 CDS MCCL_0379 NC_011999.1 404922 405998 D similar to functionally unknown protein; hypothetical protein 404922..405998 Macrococcus caseolyticus JCSC5402 7391077 YP_002559783.1 CDS MCCL_0380 NC_011999.1 406269 406676 R similar to functionally unknown protein; hypothetical protein complement(406269..406676) Macrococcus caseolyticus JCSC5402 7390454 YP_002559784.1 CDS MCCL_0381 NC_011999.1 406872 408395 D similar to p-aminobenzoyl-glutamate transporter; hypothetical protein 406872..408395 Macrococcus caseolyticus JCSC5402 7390589 YP_002559785.1 CDS MCCL_0382 NC_011999.1 408567 409328 R similar to functionally unknown protein; hypothetical protein complement(408567..409328) Macrococcus caseolyticus JCSC5402 7390590 YP_002559786.1 CDS MCCL_0383 NC_011999.1 410018 412456 D FAD-dependent pyridine nucleotide-disulfide oxidoreductase 410018..412456 Macrococcus caseolyticus JCSC5402 7390591 YP_002559787.1 CDS MCCL_0384 NC_011999.1 412467 413780 D similar to metallo-beta-lactamase superfamily protein; hypothetical protein 412467..413780 Macrococcus caseolyticus JCSC5402 7390592 YP_002559788.1 CDS MCCL_0385 NC_011999.1 413838 414305 R similar to pyrrolidone-carboxylate peptidase; hypothetical protein complement(413838..414305) Macrococcus caseolyticus JCSC5402 7390593 YP_002559789.1 CDS MCCL_0386 NC_011999.1 414437 415060 D similar to UbiE/COQ5 methyltransferase; hypothetical protein 414437..415060 Macrococcus caseolyticus JCSC5402 7390594 YP_002559790.1 CDS MCCL_0387 NC_011999.1 415146 416636 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 415146..416636 Macrococcus caseolyticus JCSC5402 7390595 YP_002559791.1 CDS MCCL_0388 NC_011999.1 416806 417747 D similar to sodium dependent transporter; hypothetical protein 416806..417747 Macrococcus caseolyticus JCSC5402 7390596 YP_002559792.1 CDS MCCL_0389 NC_011999.1 417902 418816 D similar to functionally unknown protein; hypothetical protein 417902..418816 Macrococcus caseolyticus JCSC5402 7390597 YP_002559793.1 CDS aldA NC_011999.1 419077 420555 R aldehyde dehydrogenase complement(419077..420555) Macrococcus caseolyticus JCSC5402 7390598 YP_002559794.1 CDS MCCL_0391 NC_011999.1 420974 421603 D no similarity; hypothetical protein 420974..421603 Macrococcus caseolyticus JCSC5402 7390181 YP_002559795.1 CDS MCCL_0392 NC_011999.1 421717 422175 D similar to acetyltransferase, GNAT family protein; hypothetical protein 421717..422175 Macrococcus caseolyticus JCSC5402 7390599 YP_002559796.1 CDS MCCL_0393 NC_011999.1 422181 422690 D similar to O6-methylguanine-DNA methyltransferase; hypothetical protein 422181..422690 Macrococcus caseolyticus JCSC5402 7390600 YP_002559797.1 CDS phnA NC_011999.1 422710 423042 D alkylphosphonate utilization operon protein PhnA 422710..423042 Macrococcus caseolyticus JCSC5402 7390601 YP_002559798.1 CDS MCCL_0395 NC_011999.1 423039 424175 D similar to functionally unknown protein; hypothetical protein 423039..424175 Macrococcus caseolyticus JCSC5402 7389819 YP_002559799.1 CDS MCCL_0396 NC_011999.1 424242 424748 D similar to functionally unknown protein; hypothetical protein 424242..424748 Macrococcus caseolyticus JCSC5402 7390602 YP_002559800.1 CDS MCCL_0397 NC_011999.1 424773 425144 R no similarity; hypothetical protein complement(424773..425144) Macrococcus caseolyticus JCSC5402 7390603 YP_002559801.1 CDS MCCL_0398 NC_011999.1 425309 426751 D drug-export protein 425309..426751 Macrococcus caseolyticus JCSC5402 7390604 YP_002559802.1 CDS MCCL_0399 NC_011999.1 426837 427937 D similar to functionally unknown protein; hypothetical protein 426837..427937 Macrococcus caseolyticus JCSC5402 7390605 YP_002559803.1 CDS MCCL_0400 NC_011999.1 428015 429025 D lipase LipA 428015..429025 Macrococcus caseolyticus JCSC5402 7390606 YP_002559804.1 CDS MCCL_0401 NC_011999.1 429041 429955 D similar to functionally unknown protein; hypothetical protein 429041..429955 Macrococcus caseolyticus JCSC5402 7390607 YP_002559805.1 CDS MCCL_0402 NC_011999.1 430172 430789 D similar to functionally unknown protein; hypothetical protein 430172..430789 Macrococcus caseolyticus JCSC5402 7390608 YP_002559806.1 CDS MCCL_0403 NC_011999.1 430801 431811 D phosphate transporter family protein 430801..431811 Macrococcus caseolyticus JCSC5402 7390609 YP_002559807.1 CDS MCCL_0404 NC_011999.1 431876 432406 D similar to functionally unknown protein; hypothetical protein 431876..432406 Macrococcus caseolyticus JCSC5402 7390610 YP_002559808.1 CDS MCCL_0405 NC_011999.1 432789 433220 D gluconate operon transcriptional repressor 432789..433220 Macrococcus caseolyticus JCSC5402 7390611 YP_002559809.1 CDS MCCL_0406 NC_011999.1 433220 434761 D gluconokinase 433220..434761 Macrococcus caseolyticus JCSC5402 7390612 YP_002559810.1 CDS MCCL_0407 NC_011999.1 434761 436128 D gluconate permease 434761..436128 Macrococcus caseolyticus JCSC5402 7390613 YP_002559811.1 CDS MCCL_0408 NC_011999.1 436199 436834 D similar to functionally unknown protein; hypothetical protein 436199..436834 Macrococcus caseolyticus JCSC5402 7390614 YP_002559812.1 CDS MCCL_0409 NC_011999.1 436911 437633 D similar to functionally unknown protein; hypothetical protein 436911..437633 Macrococcus caseolyticus JCSC5402 7390615 YP_002559813.1 CDS MCCL_0410 NC_011999.1 437678 438163 D similar to functionally unknown protein; hypothetical protein 437678..438163 Macrococcus caseolyticus JCSC5402 7390616 YP_002559814.1 CDS MCCL_0411 NC_011999.1 438163 438570 D similar to functionally unknown protein; hypothetical protein 438163..438570 Macrococcus caseolyticus JCSC5402 7390617 YP_002559815.1 CDS MCCL_0412 NC_011999.1 438647 439426 D similar to short-chain dehydrogenase/reductase SDR; hypothetical protein 438647..439426 Macrococcus caseolyticus JCSC5402 7390618 YP_002559816.1 CDS MCCL_0413 NC_011999.1 439543 439929 D similar to regulatory protein GntR; hypothetical protein 439543..439929 Macrococcus caseolyticus JCSC5402 7390619 YP_002559817.1 CDS MCCL_0414 NC_011999.1 439910 440815 D similar to ABC transporter ATP-binding protein; hypothetical protein 439910..440815 Macrococcus caseolyticus JCSC5402 7390620 YP_002559818.1 CDS MCCL_0415 NC_011999.1 440787 442688 D no similarity; hypothetical protein 440787..442688 Macrococcus caseolyticus JCSC5402 7390621 YP_002559819.1 CDS MCCL_0416 NC_011999.1 442727 444244 D similar to phospholipase D endonuclease domain protein; hypothetical protein 442727..444244 Macrococcus caseolyticus JCSC5402 7390622 YP_002559820.1 CDS MCCL_0417 NC_011999.1 444497 445519 D ABC transporter ATP-binding protein 444497..445519 Macrococcus caseolyticus JCSC5402 7390623 YP_002559821.1 CDS MCCL_0418 NC_011999.1 445509 446174 D ABC transporter permease 445509..446174 Macrococcus caseolyticus JCSC5402 7390624 YP_002559822.1 CDS MCCL_0419 NC_011999.1 446189 447031 D ABC transporter substrate-binding protein 446189..447031 Macrococcus caseolyticus JCSC5402 7390625 YP_002559823.1 CDS MCCL_0420 NC_011999.1 447113 447655 R similar to transcriptional regulator; hypothetical protein complement(447113..447655) Macrococcus caseolyticus JCSC5402 7390626 YP_002559824.1 CDS MCCL_0421 NC_011999.1 447795 448445 D multidurg resistance protein A 447795..448445 Macrococcus caseolyticus JCSC5402 7390627 YP_002559825.1 CDS MCCL_0422 NC_011999.1 448458 450236 D drug resistance transporter EmrB/QacA subfamily protein 448458..450236 Macrococcus caseolyticus JCSC5402 7390628 YP_002559826.1 CDS MCCL_0423 NC_011999.1 450316 450855 D similar to functionally unknown protein; hypothetical protein 450316..450855 Macrococcus caseolyticus JCSC5402 7390629 YP_002559827.1 CDS MCCL_0424 NC_011999.1 450571 451026 R no similarity; hypothetical protein complement(450571..451026) Macrococcus caseolyticus JCSC5402 7390630 YP_002559828.1 CDS MCCL_0425 NC_011999.1 450887 451756 R dehydrogenase complement(450887..451756) Macrococcus caseolyticus JCSC5402 7390631 YP_002559829.1 CDS MCCL_0426 NC_011999.1 451861 452592 D similar to Mg-dependent DNase; hypothetical protein 451861..452592 Macrococcus caseolyticus JCSC5402 7390632 YP_002559830.1 CDS MCCL_0427 NC_011999.1 452608 453468 D LysR family transcriptional regulator 452608..453468 Macrococcus caseolyticus JCSC5402 7390633 YP_002559831.1 CDS MCCL_0428 NC_011999.1 453483 454139 D similar to functionally unknown protein; hypothetical protein 453483..454139 Macrococcus caseolyticus JCSC5402 7390634 YP_002559832.1 CDS MCCL_0429 NC_011999.1 454307 455506 D similar to major facilitator superfamily protein; hypothetical protein 454307..455506 Macrococcus caseolyticus JCSC5402 7390635 YP_002559833.1 CDS MCCL_0430 NC_011999.1 455503 455985 D similar to functionally unknown protein; hypothetical protein 455503..455985 Macrococcus caseolyticus JCSC5402 7390636 YP_002559834.1 CDS MCCL_0431 NC_011999.1 456136 456609 D similar to functionally unknown protein; hypothetical protein 456136..456609 Macrococcus caseolyticus JCSC5402 7390637 YP_002559835.1 CDS MCCL_0432 NC_011999.1 456726 458762 D similar to sodium/hydrogen exchanger family protein; hypothetical protein 456726..458762 Macrococcus caseolyticus JCSC5402 7390638 YP_002559836.1 CDS MCCL_0433 NC_011999.1 458848 459603 R formate acetyltransferase activating enzyme complement(458848..459603) Macrococcus caseolyticus JCSC5402 7390639 YP_002559837.1 CDS pflB NC_011999.1 459639 461888 R formate acetyltransferase complement(459639..461888) Macrococcus caseolyticus JCSC5402 7390640 YP_002559838.1 CDS MCCL_0435 NC_011999.1 462136 462576 D similar to acetyltransferase; hypothetical protein 462136..462576 Macrococcus caseolyticus JCSC5402 7389813 YP_002559839.1 CDS MCCL_0436 NC_011999.1 462677 463186 R similar to functionally unknown protein; hypothetical protein complement(462677..463186) Macrococcus caseolyticus JCSC5402 7390641 YP_002559840.1 CDS MCCL_0437 NC_011999.1 463296 464171 D no similarity; hypothetical protein 463296..464171 Macrococcus caseolyticus JCSC5402 7390642 YP_002559841.1 CDS MCCL_0438 NC_011999.1 464565 466025 D similar to functionally unknown protein; hypothetical protein 464565..466025 Macrococcus caseolyticus JCSC5402 7390643 YP_002559842.1 CDS MCCL_0439 NC_011999.1 466040 467725 D similar to secreted metal-dependent protease; hypothetical protein 466040..467725 Macrococcus caseolyticus JCSC5402 7390644 YP_002559843.1 CDS MCCL_0440 NC_011999.1 467736 468263 D similar to acetyltransferase, GNAT family; hypothetical protein 467736..468263 Macrococcus caseolyticus JCSC5402 7390645 YP_002559844.1 CDS MCCL_0441 NC_011999.1 468247 468723 D similar to functionally unknown protein; hypothetical protein 468247..468723 Macrococcus caseolyticus JCSC5402 7390646 YP_002559845.1 CDS MCCL_0442 NC_011999.1 468763 469239 D similar to acetyltransferase, GNAT family; hypothetical protein 468763..469239 Macrococcus caseolyticus JCSC5402 7390647 YP_002559846.1 CDS MCCL_0443 NC_011999.1 469236 469775 R similar to functionally unknown protein; hypothetical protein complement(469236..469775) Macrococcus caseolyticus JCSC5402 7390648 YP_002559847.1 CDS MCCL_0444 NC_011999.1 469684 470499 R similar to functionally unknown protein; hypothetical protein complement(469684..470499) Macrococcus caseolyticus JCSC5402 7390649 YP_002559848.1 CDS MCCL_0445 NC_011999.1 470628 471044 R similar to MarR family regulatory protein; hypothetical protein complement(470628..471044) Macrococcus caseolyticus JCSC5402 7390650 YP_002559849.1 CDS MCCL_0446 NC_011999.1 471169 472014 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase complement(471169..472014) Macrococcus caseolyticus JCSC5402 7390651 YP_002559850.1 CDS MCCL_0447 NC_011999.1 472174 473772 D similar to MsbA family ABC transporter ATP-binding protein; hypothetical protein 472174..473772 Macrococcus caseolyticus JCSC5402 7390652 YP_002559851.1 CDS MCCL_0448 NC_011999.1 473753 475369 D similar to MsbA family ABC transporter ATP-binding protein; hypothetical protein 473753..475369 Macrococcus caseolyticus JCSC5402 7390653 YP_002559852.1 CDS MCCL_0449 NC_011999.1 475485 476321 D similar to degV family protein; hypothetical protein 475485..476321 Macrococcus caseolyticus JCSC5402 7390654 YP_002559853.1 CDS MCCL_0450 NC_011999.1 476372 476806 R transcriptional regulator MarR family protein complement(476372..476806) Macrococcus caseolyticus JCSC5402 7390655 YP_002559854.1 CDS MCCL_0451 NC_011999.1 477041 477952 D similar to cobalamin synthesis P47K family protein; hypothetical protein 477041..477952 Macrococcus caseolyticus JCSC5402 7390656 YP_002559855.1 CDS MCCL_0452 NC_011999.1 478075 478812 D transcriptional regulator DeoR family protein 478075..478812 Macrococcus caseolyticus JCSC5402 7390657 YP_002559856.1 CDS fruA NC_011999.1 478823 479734 D fructose 1-phosphate kinase 478823..479734 Macrococcus caseolyticus JCSC5402 7390658 YP_002559857.1 CDS fruB NC_011999.1 479753 481642 D fructose specific permease 479753..481642 Macrococcus caseolyticus JCSC5402 7390574 YP_002559858.1 CDS MCCL_0455 NC_011999.1 481816 482598 D similar to alpha/beta hydrolase fold family protein; hypothetical protein 481816..482598 Macrococcus caseolyticus JCSC5402 7390575 YP_002559859.1 CDS MCCL_0456 NC_011999.1 482826 484163 D hypothetical protein 482826..484163 Macrococcus caseolyticus JCSC5402 7390659 YP_002559860.1 CDS MCCL_0457 NC_011999.1 484165 484464 D similar to functionally unknown protein; hypothetical protein 484165..484464 Macrococcus caseolyticus JCSC5402 7390660 YP_002559861.1 CDS MCCL_0458 NC_011999.1 484521 485231 D tRNA pseudouridine synthase A 484521..485231 Macrococcus caseolyticus JCSC5402 7390661 YP_002559862.1 CDS MCCL_0459 NC_011999.1 485298 486083 R similar to functionally unknown protein; hypothetical protein complement(485298..486083) Macrococcus caseolyticus JCSC5402 7390662 YP_002559863.1 CDS MCCL_0460 NC_011999.1 486207 487043 D aldo/keto reductase family protein 486207..487043 Macrococcus caseolyticus JCSC5402 7390663 YP_002559864.1 CDS MCCL_0461 NC_011999.1 487173 487898 D similar to functionally unknown protein; hypothetical protein 487173..487898 Macrococcus caseolyticus JCSC5402 7390664 YP_002559865.1 CDS MCCL_0462 NC_011999.1 488352 488954 R similar to functionally unknown protein; hypothetical protein complement(488352..488954) Macrococcus caseolyticus JCSC5402 7390665 YP_002559866.1 CDS MCCL_0463 NC_011999.1 489023 489733 R similar to radical activating enzyme family protein; hypothetical protein complement(489023..489733) Macrococcus caseolyticus JCSC5402 7390666 YP_002559867.1 CDS MCCL_0464 NC_011999.1 489733 490146 R 6-pyruvoyl tetrahydrobiopterin synthase complement(489733..490146) Macrococcus caseolyticus JCSC5402 7390667 YP_002559868.1 CDS MCCL_0465 NC_011999.1 490143 490811 R ExsB protein complement(490143..490811) Macrococcus caseolyticus JCSC5402 7390668 YP_002559869.1 CDS MCCL_0466 NC_011999.1 490983 491564 D similar to glutamine amidotransferase of anthranilate synthase; hypothetical protein 490983..491564 Macrococcus caseolyticus JCSC5402 7390669 YP_002559870.1 CDS MCCL_0467 NC_011999.1 491548 493227 D similar to anthranilate/para-aminobenzoate synthases component I; hypothetical protein 491548..493227 Macrococcus caseolyticus JCSC5402 7389585 YP_002559871.1 CDS MCCL_0468 NC_011999.1 493598 494542 D similar to functionally unknown protein; hypothetical protein 493598..494542 Macrococcus caseolyticus JCSC5402 7389586 YP_002559872.1 CDS MCCL_0469 NC_011999.1 494750 496681 D sulfatase family protein 494750..496681 Macrococcus caseolyticus JCSC5402 7389587 YP_002559873.1 CDS MCCL_0470 NC_011999.1 496773 497588 R similar to divalent heavy-metal cations transporter; hypothetical protein complement(496773..497588) Macrococcus caseolyticus JCSC5402 7389588 YP_002559874.1 CDS MCCL_0471 NC_011999.1 497717 499591 D ABC transporter ATP-binding protein 497717..499591 Macrococcus caseolyticus JCSC5402 7389589 YP_002559875.1 CDS recQ NC_011999.1 499595 501361 D ATP-dependent DNA helicase RecQ 499595..501361 Macrococcus caseolyticus JCSC5402 7389590 YP_002559876.1 CDS MCCL_0473 NC_011999.1 501393 502346 D ABC transporter ATP-binding protein 501393..502346 Macrococcus caseolyticus JCSC5402 7389880 YP_002559877.1 CDS MCCL_0474 NC_011999.1 502346 503860 D glycine/betaine ABC transporter substrate-binding protein 502346..503860 Macrococcus caseolyticus JCSC5402 7389591 YP_002559878.1 CDS hisC NC_011999.1 503945 504997 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 503945..504997 Macrococcus caseolyticus JCSC5402 7389592 YP_002559879.1 CDS MCCL_0476 NC_011999.1 505063 505596 D similar to 5'(3')-deoxyribonucleotidase; hypothetical protein 505063..505596 Macrococcus caseolyticus JCSC5402 7391124 YP_002559880.1 CDS MCCL_0477 NC_011999.1 505680 506588 R similar to multidrug resistance protein; hypothetical protein complement(505680..506588) Macrococcus caseolyticus JCSC5402 7389593 YP_002559881.1 CDS MCCL_0478 NC_011999.1 506674 508185 R similar to proton-dependent oligopeptide transport protein ue; hypothetical protein complement(506674..508185) Macrococcus caseolyticus JCSC5402 7389594 YP_002559882.1 CDS MCCL_0479 NC_011999.1 508470 509984 R di-tripeptide permease complement(508470..509984) Macrococcus caseolyticus JCSC5402 7389595 YP_002559883.1 CDS MCCL_0480 NC_011999.1 510143 510640 R 7-cyano-7-deazaguanine reductase complement(510143..510640) Macrococcus caseolyticus JCSC5402 7389596 YP_002559884.1 CDS MCCL_0481 NC_011999.1 510650 511507 R similar to functionally unknown protein; hypothetical protein complement(510650..511507) Macrococcus caseolyticus JCSC5402 7389597 YP_002559885.1 CDS nrdI NC_011999.1 511867 512256 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 511867..512256 Macrococcus caseolyticus JCSC5402 7389598 YP_002559886.1 CDS nrdE NC_011999.1 512219 514324 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 512219..514324 Macrococcus caseolyticus JCSC5402 7390734 YP_002559887.1 CDS nrdF NC_011999.1 514388 515356 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 514388..515356 Macrococcus caseolyticus JCSC5402 7390733 YP_002559888.1 CDS MCCL_0485 NC_011999.1 515484 516236 D similar to functionally unknown protein; hypothetical protein 515484..516236 Macrococcus caseolyticus JCSC5402 7390731 YP_002559889.1 CDS murB NC_011999.1 516312 517226 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(516312..517226) Macrococcus caseolyticus JCSC5402 7389599 YP_002559890.1 CDS MCCL_0487 NC_011999.1 517281 517778 R similar to functionally unknown protein; hypothetical protein complement(517281..517778) Macrococcus caseolyticus JCSC5402 7389600 YP_002559891.1 CDS MCCL_0488 NC_011999.1 517869 518768 D similar to functionally unknown protein; hypothetical protein 517869..518768 Macrococcus caseolyticus JCSC5402 7389601 YP_002559892.1 CDS MCCL_0489 NC_011999.1 519149 519469 D similar to functionally unknown protein; hypothetical protein 519149..519469 Macrococcus caseolyticus JCSC5402 7389602 YP_002559893.1 CDS MCCL_0490 NC_011999.1 519543 520610 D similar to glycerate kinase; hypothetical protein 519543..520610 Macrococcus caseolyticus JCSC5402 7389603 YP_002559894.1 CDS pepT NC_011999.1 520688 521911 R peptidase T complement(520688..521911) Macrococcus caseolyticus JCSC5402 7389604 YP_002559895.1 CDS MCCL_0492 NC_011999.1 522019 522483 R similar to functionally unknown protein; hypothetical protein complement(522019..522483) Macrococcus caseolyticus JCSC5402 7389811 YP_002559896.1 CDS MCCL_0493 NC_011999.1 522480 523250 R similar to functionally unknown protein; hypothetical protein complement(522480..523250) Macrococcus caseolyticus JCSC5402 7389605 YP_002559897.1 CDS MCCL_0494 NC_011999.1 523264 524328 R similar to functionally unknown protein; hypothetical protein complement(523264..524328) Macrococcus caseolyticus JCSC5402 7389606 YP_002559898.1 CDS MCCL_0495 NC_011999.1 524343 525200 R similar to functionally unknown protein; hypothetical protein complement(524343..525200) Macrococcus caseolyticus JCSC5402 7389607 YP_002559899.1 CDS MCCL_0496 NC_011999.1 525391 526437 D lipophilic regulator protein 525391..526437 Macrococcus caseolyticus JCSC5402 7389608 YP_002559900.1 CDS MCCL_0497 NC_011999.1 526451 527089 R similar to functionally unknown protein; hypothetical protein complement(526451..527089) Macrococcus caseolyticus JCSC5402 7389609 YP_002559901.1 CDS MCCL_0498 NC_011999.1 527223 528074 D DegV protein 527223..528074 Macrococcus caseolyticus JCSC5402 7389610 YP_002559902.1 CDS MCCL_0499 NC_011999.1 528140 529357 D similar to comF operon protein 1; hypothetical protein 528140..529357 Macrococcus caseolyticus JCSC5402 7389611 YP_002559903.1 CDS MCCL_0500 NC_011999.1 529332 530012 D similar to late competence operon protein FC; hypothetical protein 529332..530012 Macrococcus caseolyticus JCSC5402 7389612 YP_002559904.1 CDS MCCL_0501 NC_011999.1 530077 530637 D ribosomal subunit interface protein 530077..530637 Macrococcus caseolyticus JCSC5402 7389613 YP_002559905.1 CDS secA NC_011999.1 530930 533458 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 530930..533458 Macrococcus caseolyticus JCSC5402 7389614 YP_002559906.1 CDS prfB NC_011999.1 533514 534566 D peptide chain release factor RF-2 533514..534566 Macrococcus caseolyticus JCSC5402 7389573 YP_002559907.1 CDS MCCL_0504 NC_011999.1 534644 534955 D cytochrome c551 534644..534955 Macrococcus caseolyticus JCSC5402 7389837 YP_002559908.1 CDS MCCL_0505 NC_011999.1 535158 536141 D similar to invasion-associated protein p60; hypothetical protein 535158..536141 Macrococcus caseolyticus JCSC5402 7389615 YP_002559909.1 CDS MCCL_0506 NC_011999.1 536333 536773 D similar to secretory antigen precursor SsaA; hypothetical protein 536333..536773 Macrococcus caseolyticus JCSC5402 7389616 YP_002559910.1 CDS MCCL_0507 NC_011999.1 536856 537395 D no similarity; hypothetical protein 536856..537395 Macrococcus caseolyticus JCSC5402 7389617 YP_002559911.1 CDS MCCL_0508 NC_011999.1 537406 538053 D similar to phosphohydrolase; hypothetical protein 537406..538053 Macrococcus caseolyticus JCSC5402 7389618 YP_002559912.1 CDS uvrB NC_011999.1 538469 540442 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 538469..540442 Macrococcus caseolyticus JCSC5402 7389619 YP_002559913.1 CDS uvrA NC_011999.1 540447 543266 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 540447..543266 Macrococcus caseolyticus JCSC5402 7390496 YP_002559914.1 CDS hprK NC_011999.1 543423 544352 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 543423..544352 Macrococcus caseolyticus JCSC5402 7390495 YP_002559915.1 CDS MCCL_0512 NC_011999.1 544354 545193 D prolipoprotein diacylglyceryl transferase 544354..545193 Macrococcus caseolyticus JCSC5402 7391127 YP_002559916.1 CDS MCCL_0513 NC_011999.1 545171 545644 D O-acetyltransferase 545171..545644 Macrococcus caseolyticus JCSC5402 7389620 YP_002559917.1 CDS MCCL_0514 NC_011999.1 545982 547097 D similar to functionally unknown protein; hypothetical protein 545982..547097 Macrococcus caseolyticus JCSC5402 7389621 YP_002559918.1 CDS trxB NC_011999.1 547151 548080 D thioredoxin reductase 547151..548080 Macrococcus caseolyticus JCSC5402 7389622 YP_002559919.1 CDS MCCL_0516 NC_011999.1 548167 549069 D similar to functionally unknown protein; hypothetical protein 548167..549069 Macrococcus caseolyticus JCSC5402 7390488 YP_002559920.1 CDS MCCL_0517 NC_011999.1 549056 550048 D similar to functionally unknown protein; hypothetical protein 549056..550048 Macrococcus caseolyticus JCSC5402 7389623 YP_002559921.1 CDS MCCL_0518 NC_011999.1 550050 551000 D similar to functionally unknown protein; hypothetical protein 550050..551000 Macrococcus caseolyticus JCSC5402 7389624 YP_002559922.1 CDS clpP NC_011999.1 551078 551662 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(551078..551662) Macrococcus caseolyticus JCSC5402 7389625 YP_002559923.1 CDS gapR NC_011999.1 552198 553220 D transcriptional regulator GapR 552198..553220 Macrococcus caseolyticus JCSC5402 7390519 YP_002559924.1 CDS gapA NC_011999.1 553358 554371 D glyceraldehyde-3-phosphate dehydrogenase 553358..554371 Macrococcus caseolyticus JCSC5402 7390587 YP_002559925.1 CDS pgk NC_011999.1 554478 555668 D phosphoglycerate kinase 554478..555668 Macrococcus caseolyticus JCSC5402 7390585 YP_002559926.1 CDS tpi NC_011999.1 555684 556430 D triosephosphate isomerase 555684..556430 Macrococcus caseolyticus JCSC5402 7389815 YP_002559927.1 CDS pgm NC_011999.1 556430 557965 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 556430..557965 Macrococcus caseolyticus JCSC5402 7390480 YP_002559928.1 CDS eno NC_011999.1 558057 559361 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 558057..559361 Macrococcus caseolyticus JCSC5402 7389816 YP_002559929.1 CDS secG NC_011999.1 559455 559688 D preprotein translocase SecG subunit 559455..559688 Macrococcus caseolyticus JCSC5402 7390560 YP_002559930.1 CDS MCCL_0527 NC_011999.1 559785 560525 D similar to carboxylesterase; hypothetical protein 559785..560525 Macrococcus caseolyticus JCSC5402 7389576 YP_002559931.1 CDS MCCL_0528 NC_011999.1 560538 562859 D VacB/RNase II family exoribonuclease 560538..562859 Macrococcus caseolyticus JCSC5402 7389626 YP_002559932.1 CDS MCCL_0529 NC_011999.1 562870 563331 D ssrA-binding protein 562870..563331 Macrococcus caseolyticus JCSC5402 7389627 YP_002559933.1 CDS MCCL_0530 NC_011999.1 564487 570624 D similar to cell wall associated biofilm protein; hypothetical protein 564487..570624 Macrococcus caseolyticus JCSC5402 7389628 YP_002559934.1 CDS MCCL_0531 NC_011999.1 572529 573092 D similar to ORF012 of bacteriophage 88; hypothetical protein 572529..573092 Macrococcus caseolyticus JCSC5402 7389629 YP_002559935.1 CDS MCCL_0532 NC_011999.1 574043 574765 D similar to 3-dehydroquinate dehydratase; hypothetical protein 574043..574765 Macrococcus caseolyticus JCSC5402 7389630 YP_002559936.1 CDS MCCL_0533 NC_011999.1 574835 575368 D similar to functionally unknown protein; hypothetical protein 574835..575368 Macrococcus caseolyticus JCSC5402 7389631 YP_002559937.1 CDS MCCL_0534 NC_011999.1 575411 575734 R thioredoxin complement(575411..575734) Macrococcus caseolyticus JCSC5402 7389632 YP_002559938.1 CDS MCCL_0535 NC_011999.1 575862 576215 D similar to arsenate reductase; hypothetical protein 575862..576215 Macrococcus caseolyticus JCSC5402 7389633 YP_002559939.1 CDS MCCL_0536 NC_011999.1 576289 576657 D glycine cleavage system protein H 576289..576657 Macrococcus caseolyticus JCSC5402 7389634 YP_002559940.1 CDS MCCL_0537 NC_011999.1 576725 577114 D similar to functionally unknown protein; hypothetical protein 576725..577114 Macrococcus caseolyticus JCSC5402 7389635 YP_002559941.1 CDS MCCL_0538 NC_011999.1 577059 577397 D similar to thioredoxin; hypothetical protein 577059..577397 Macrococcus caseolyticus JCSC5402 7389636 YP_002559942.1 CDS MCCL_0539 NC_011999.1 577621 578649 D ABC transporter ATP-binding protein 577621..578649 Macrococcus caseolyticus JCSC5402 7389637 YP_002559943.1 CDS MCCL_0540 NC_011999.1 578639 579334 D ABC transporter permease 578639..579334 Macrococcus caseolyticus JCSC5402 7389638 YP_002559944.1 CDS MCCL_0541 NC_011999.1 579398 580222 D ABC transporter substrate-binding protein 579398..580222 Macrococcus caseolyticus JCSC5402 7389639 YP_002559945.1 CDS MCCL_0542 NC_011999.1 580409 581185 D ABC transporter ATP-binding protein 580409..581185 Macrococcus caseolyticus JCSC5402 7389640 YP_002559946.1 CDS MCCL_0543 NC_011999.1 581217 582521 D similar to functionally unknown protein; hypothetical protein 581217..582521 Macrococcus caseolyticus JCSC5402 7389641 YP_002559947.1 CDS MCCL_0544 NC_011999.1 582546 583781 D similar to selenocysteine lyase; hypothetical protein 582546..583781 Macrococcus caseolyticus JCSC5402 7389642 YP_002559948.1 CDS nifU NC_011999.1 583771 584235 D nitrogen fixation protein NifU 583771..584235 Macrococcus caseolyticus JCSC5402 7389643 YP_002559949.1 CDS sufB NC_011999.1 584256 585653 D FeS assembly protein SufB 584256..585653 Macrococcus caseolyticus JCSC5402 7390732 YP_002559950.1 CDS MCCL_0547 NC_011999.1 585769 586695 D CorA-like Mg2+ transporter protein 585769..586695 Macrococcus caseolyticus JCSC5402 7390455 YP_002559951.1 CDS MCCL_0548 NC_011999.1 586750 587511 R similar to functionally unknown protein; hypothetical protein complement(586750..587511) Macrococcus caseolyticus JCSC5402 7389644 YP_002559952.1 CDS MCCL_0549 NC_011999.1 587508 588224 R similar to amino acid ABC transporter ATP-binding protein; hypothetical protein complement(587508..588224) Macrococcus caseolyticus JCSC5402 7389645 YP_002559953.1 CDS MCCL_0550 NC_011999.1 588297 589145 D similar to functionally unknown protein; hypothetical protein 588297..589145 Macrococcus caseolyticus JCSC5402 7389646 YP_002559954.1 CDS MCCL_0551 NC_011999.1 589275 589991 D similar to functionally unknown protein; hypothetical protein 589275..589991 Macrococcus caseolyticus JCSC5402 7389647 YP_002559955.1 CDS MCCL_0552 NC_011999.1 590007 591323 D similar to functionally unknown protein; hypothetical protein 590007..591323 Macrococcus caseolyticus JCSC5402 7389648 YP_002559956.1 CDS MCCL_0553 NC_011999.1 591410 592324 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 591410..592324 Macrococcus caseolyticus JCSC5402 7389649 YP_002559957.1 CDS MCCL_0554 NC_011999.1 592332 592802 D similar to autolysis and methicillin resistant-related protein; hypothetical protein 592332..592802 Macrococcus caseolyticus JCSC5402 7389650 YP_002559958.1 CDS MCCL_0555 NC_011999.1 592863 593825 D similar to autolysis and methicillin resistant-related protein; hypothetical protein 592863..593825 Macrococcus caseolyticus JCSC5402 7389651 YP_002559959.1 CDS MCCL_0556 NC_011999.1 593887 594978 D similar to functionally unknown protein; hypothetical protein 593887..594978 Macrococcus caseolyticus JCSC5402 7389652 YP_002559960.1 CDS MCCL_0557 NC_011999.1 595018 595281 R similar to functionally unknown protein; hypothetical protein complement(595018..595281) Macrococcus caseolyticus JCSC5402 7389653 YP_002559961.1 CDS MCCL_0558 NC_011999.1 595365 595802 D similar to functionally unknown protein; hypothetical protein 595365..595802 Macrococcus caseolyticus JCSC5402 7389654 YP_002559962.1 CDS MCCL_0559 NC_011999.1 595789 596574 D haloacid dehalogenase 595789..596574 Macrococcus caseolyticus JCSC5402 7389655 YP_002559963.1 CDS dltA NC_011999.1 596939 598345 D transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 596939..598345 Macrococcus caseolyticus JCSC5402 7389656 YP_002559964.1 CDS dltB NC_011999.1 598345 599556 D D-alanine transport protein 598345..599556 Macrococcus caseolyticus JCSC5402 7390544 YP_002559965.1 CDS dltD NC_011999.1 599802 600956 D poly glycerophosphate chain D-alanine transfer protein 599802..600956 Macrococcus caseolyticus JCSC5402 7390545 YP_002559966.1 CDS MCCL_0563 NC_011999.1 601352 601660 D similar to functionally unknown protein; hypothetical protein 601352..601660 Macrococcus caseolyticus JCSC5402 7390546 YP_002559967.1 CDS MCCL_0564 NC_011999.1 601707 602771 R NADH dehydrogenase FAD-containing subunit complement(601707..602771) Macrococcus caseolyticus JCSC5402 7389657 YP_002559968.1 CDS MCCL_0565 NC_011999.1 603178 603537 D similar to functionally unknown protein; hypothetical protein 603178..603537 Macrococcus caseolyticus JCSC5402 7389658 YP_002559969.1 CDS MCCL_0566 NC_011999.1 603667 604893 D similar to pyridine nucleotide-disulphide oxidoreductase; hypothetical protein 603667..604893 Macrococcus caseolyticus JCSC5402 7389659 YP_002559970.1 CDS MCCL_0567 NC_011999.1 604982 605461 D similar to mutT/nudix family protein; hypothetical protein 604982..605461 Macrococcus caseolyticus JCSC5402 7389660 YP_002559971.1 CDS MCCL_0568 NC_011999.1 605472 605792 D similar to functionally unknown protein; hypothetical protein 605472..605792 Macrococcus caseolyticus JCSC5402 7389661 YP_002559972.1 CDS MCCL_0569 NC_011999.1 605803 606771 D no similarity; hypothetical protein 605803..606771 Macrococcus caseolyticus JCSC5402 7389662 YP_002559973.1 CDS MCCL_0570 NC_011999.1 606823 608136 D similar to transporter; hypothetical protein 606823..608136 Macrococcus caseolyticus JCSC5402 7389663 YP_002559974.1 CDS MCCL_0571 NC_011999.1 608158 608553 D similar to ComA2 family protein; hypothetical protein 608158..608553 Macrococcus caseolyticus JCSC5402 7389664 YP_002559975.1 CDS mnhG NC_011999.1 608603 608950 R Na+/H+ antiporter MnhG subunit complement(608603..608950) Macrococcus caseolyticus JCSC5402 7389665 YP_002559976.1 CDS mnhF NC_011999.1 608916 609218 R Na+/H+ antiporter MnhF subunit complement(608916..609218) Macrococcus caseolyticus JCSC5402 7390695 YP_002559977.1 CDS mnhE NC_011999.1 609215 609694 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E complement(609215..609694) Macrococcus caseolyticus JCSC5402 7390694 YP_002559978.1 CDS mnhD NC_011999.1 609696 611177 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D complement(609696..611177) Macrococcus caseolyticus JCSC5402 7390693 YP_002559979.1 CDS mnhC NC_011999.1 611167 611508 R Na+/H+ antiporter MnhC subunit complement(611167..611508) Macrococcus caseolyticus JCSC5402 7390692 YP_002559980.1 CDS mnhB NC_011999.1 611508 611936 R Na+/H+ antiporter MnhB subunit complement(611508..611936) Macrococcus caseolyticus JCSC5402 7390691 YP_002559981.1 CDS mnhA NC_011999.1 611920 614298 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A complement(611920..614298) Macrococcus caseolyticus JCSC5402 7390690 YP_002559982.1 CDS MCCL_0579 NC_011999.1 614471 614848 R similar to kinase-associated protein B; hypothetical protein complement(614471..614848) Macrococcus caseolyticus JCSC5402 7390689 YP_002559983.1 CDS ppi NC_011999.1 614912 615502 D cyclophilin-type peptidyl-prolyl cis-trans isomerase 614912..615502 Macrococcus caseolyticus JCSC5402 7390127 YP_002559984.1 CDS MCCL_0581 NC_011999.1 616105 616473 D general stress protein 13 616105..616473 Macrococcus caseolyticus JCSC5402 7389833 YP_002559985.1 CDS MCCL_0582 NC_011999.1 616605 618149 D aldehyde dehydrogenase 616605..618149 Macrococcus caseolyticus JCSC5402 7390210 YP_002559986.1 CDS MCCL_0583 NC_011999.1 618210 619403 D ornithine aminotransferase 618210..619403 Macrococcus caseolyticus JCSC5402 7390211 YP_002559987.1 CDS gudB NC_011999.1 619497 620741 D NAD-specific glutamate dehydrogenase 619497..620741 Macrococcus caseolyticus JCSC5402 7390212 YP_002559988.1 CDS MCCL_0585 NC_011999.1 620819 621979 D NADH-dependent butanol dehydrogenase 620819..621979 Macrococcus caseolyticus JCSC5402 7391113 YP_002559989.1 CDS argH NC_011999.1 622021 623394 R argininosuccinate lyase complement(622021..623394) Macrococcus caseolyticus JCSC5402 7390213 YP_002559990.1 CDS argG NC_011999.1 623387 624595 R argininosuccinate synthase complement(623387..624595) Macrococcus caseolyticus JCSC5402 7390187 YP_002559991.1 CDS pgi NC_011999.1 624818 626155 D glucose-6-phosphate isomerase A 624818..626155 Macrococcus caseolyticus JCSC5402 7390186 YP_002559992.1 CDS MCCL_0589 NC_011999.1 626251 626817 D similar to functionally unknown protein; hypothetical protein 626251..626817 Macrococcus caseolyticus JCSC5402 7389814 YP_002559993.1 CDS MCCL_0590 NC_011999.1 626851 627399 D type-I signal peptidase SipB 626851..627399 Macrococcus caseolyticus JCSC5402 7390214 YP_002559994.1 CDS MCCL_0591 NC_011999.1 627461 630817 D ATP-dependent nuclease subunit B 627461..630817 Macrococcus caseolyticus JCSC5402 7390215 YP_002559995.1 CDS MCCL_0592 NC_011999.1 630801 634247 D similar to ATP-dependent nuclease subunit A; hypothetical protein 630801..634247 Macrococcus caseolyticus JCSC5402 7390216 YP_002559996.1 CDS MCCL_0593 NC_011999.1 634247 635239 D no similarity; hypothetical protein 634247..635239 Macrococcus caseolyticus JCSC5402 7390217 YP_002559997.1 CDS MCCL_0594 NC_011999.1 635315 636214 D fumarylacetoacetate hydrolase family protein 635315..636214 Macrococcus caseolyticus JCSC5402 7390218 YP_002559998.1 CDS MCCL_0595 NC_011999.1 636302 636688 D similar to functionally unknown protein; hypothetical protein 636302..636688 Macrococcus caseolyticus JCSC5402 7390219 YP_002559999.1 CDS MCCL_0596 NC_011999.1 636819 638219 D similar to alpha-amylase; hypothetical protein 636819..638219 Macrococcus caseolyticus JCSC5402 7390220 YP_002560000.1 CDS cdr NC_011999.1 638351 639667 R NADPH-dependent; catalyzes the reduction of coenzyme A disulfide; coenzyme A disulfide reductase complement(638351..639667) Macrococcus caseolyticus JCSC5402 7390221 YP_002560001.1 CDS MCCL_0598 NC_011999.1 639670 640482 R similar to haloacid dehalogenase-like hydrolase; hypothetical protein complement(639670..640482) Macrococcus caseolyticus JCSC5402 7390511 YP_002560002.1 CDS MCCL_0599 NC_011999.1 640580 640876 D similar to functionally unknown protein; hypothetical protein 640580..640876 Macrococcus caseolyticus JCSC5402 7390222 YP_002560003.1 CDS MCCL_0601 NC_011999.1 640933 641628 R similar to ranscription regulatory protein Fnr; hypothetical protein complement(640933..641628) Macrococcus caseolyticus JCSC5402 7390223 YP_002560004.1 CDS clpB NC_011999.1 641608 644361 D ATP-dependent Clp protease ATP-binding subunit ClpB 641608..644361 Macrococcus caseolyticus JCSC5402 7390224 YP_002560005.1 CDS MCCL_0602 NC_011999.1 644699 645700 D similar to transcriptional activator protein Med; hypothetical protein 644699..645700 Macrococcus caseolyticus JCSC5402 7390517 YP_002560006.1 CDS MCCL_0603 NC_011999.1 645785 646738 D 3-oxoacyl-ACP synthase III 645785..646738 Macrococcus caseolyticus JCSC5402 7390225 YP_002560007.1 CDS MCCL_0604 NC_011999.1 646735 647967 D 3-oxoacyl-ACP synthase II 646735..647967 Macrococcus caseolyticus JCSC5402 7390226 YP_002560008.1 CDS oppB NC_011999.1 648721 649650 D oligopeptide ABC transporter permease OppB 648721..649650 Macrococcus caseolyticus JCSC5402 7390227 YP_002560009.1 CDS oppC NC_011999.1 649650 650699 D oligopeptide ABC transporter permease OppC 649650..650699 Macrococcus caseolyticus JCSC5402 7390742 YP_002560010.1 CDS oppD NC_011999.1 650714 651787 D oligopeptide ABC transporter ATP-binding protein OppD 650714..651787 Macrococcus caseolyticus JCSC5402 7390743 YP_002560011.1 CDS oppF NC_011999.1 651787 652983 D oligopeptide ABC transporter ATP-binding protein OppF 651787..652983 Macrococcus caseolyticus JCSC5402 7390744 YP_002560012.1 CDS MCCL_0609 NC_011999.1 653215 654852 D oligopeptide ABC transporter OppA oligopeptide-binding protein 653215..654852 Macrococcus caseolyticus JCSC5402 7390745 YP_002560013.1 CDS trpS NC_011999.1 655063 656055 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(655063..656055) Macrococcus caseolyticus JCSC5402 7390228 YP_002560014.1 CDS spxA NC_011999.1 656476 656871 D the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; transcriptional regulator Spx 656476..656871 Macrococcus caseolyticus JCSC5402 7390484 YP_002560015.1 CDS MCCL_0612 NC_011999.1 656997 657659 D enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 656997..657659 Macrococcus caseolyticus JCSC5402 7390229 YP_002560016.1 CDS MCCL_0613 NC_011999.1 657725 658720 D similar to functionally unknown protein; hypothetical protein 657725..658720 Macrococcus caseolyticus JCSC5402 7390230 YP_002560017.1 CDS MCCL_0614 NC_011999.1 658756 659883 D ThiMet oligopeptidase 658756..659883 Macrococcus caseolyticus JCSC5402 7390231 YP_002560018.1 CDS MCCL_0615 NC_011999.1 659883 660566 D ThiMet oligopeptidase 659883..660566 Macrococcus caseolyticus JCSC5402 7390232 YP_002560019.1 CDS MCCL_0616 NC_011999.1 661013 661795 R GTP pyrophosphokinase complement(661013..661795) Macrococcus caseolyticus JCSC5402 7390233 YP_002560020.1 CDS MCCL_0617 NC_011999.1 661811 662179 R globin family protein complement(661811..662179) Macrococcus caseolyticus JCSC5402 7390234 YP_002560021.1 CDS MCCL_0618 NC_011999.1 662224 662808 R similar to functionally unknown protein; hypothetical protein complement(662224..662808) Macrococcus caseolyticus JCSC5402 7390235 YP_002560022.1 CDS MCCL_0619 NC_011999.1 662957 663298 D similar to functionally unknown protein; hypothetical protein 662957..663298 Macrococcus caseolyticus JCSC5402 7390236 YP_002560023.1 CDS MCCL_0620 NC_011999.1 663433 663939 D GTP pyrophosphokinase 663433..663939 Macrococcus caseolyticus JCSC5402 7390237 YP_002560024.1 CDS ppnK NC_011999.1 663948 664748 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 663948..664748 Macrococcus caseolyticus JCSC5402 7390238 YP_002560025.1 CDS MCCL_0622 NC_011999.1 664766 665473 D ribosomal large subunit pseudouridine synthase 664766..665473 Macrococcus caseolyticus JCSC5402 7390239 YP_002560026.1 CDS MCCL_0623 NC_011999.1 665542 666918 D Mg2+ transporter 665542..666918 Macrococcus caseolyticus JCSC5402 7390240 YP_002560027.1 CDS MCCL_0624 NC_011999.1 666928 668757 D Na+/H+ antiporter protein 666928..668757 Macrococcus caseolyticus JCSC5402 7390241 YP_002560028.1 CDS MCCL_0625 NC_011999.1 668917 669690 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 668917..669690 Macrococcus caseolyticus JCSC5402 7390242 YP_002560029.1 CDS MCCL_0626 NC_011999.1 669740 670249 R similar to 2'-5' RNA ligase; hypothetical protein complement(669740..670249) Macrococcus caseolyticus JCSC5402 7390243 YP_002560030.1 CDS MCCL_0627 NC_011999.1 670296 670973 R similar to functionally unknown protein; hypothetical protein complement(670296..670973) Macrococcus caseolyticus JCSC5402 7390244 YP_002560031.1 CDS MCCL_0628 NC_011999.1 671073 672203 D similar to functionally unknown protein; hypothetical protein 671073..672203 Macrococcus caseolyticus JCSC5402 7390245 YP_002560032.1 CDS MCCL_0629 NC_011999.1 672350 673534 R similar to permease of the major facilitator superfamily; hypothetical protein complement(672350..673534) Macrococcus caseolyticus JCSC5402 7390246 YP_002560033.1 CDS murG NC_011999.1 673512 674897 R processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase complement(673512..674897) Macrococcus caseolyticus JCSC5402 7390247 YP_002560034.1 CDS murE NC_011999.1 675031 676500 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase 675031..676500 Macrococcus caseolyticus JCSC5402 7390719 YP_002560035.1 CDS prfC NC_011999.1 676754 678316 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 676754..678316 Macrococcus caseolyticus JCSC5402 7390717 YP_002560036.1 CDS MCCL_0633 NC_011999.1 678332 679102 D toxic anion resistance protein 678332..679102 Macrococcus caseolyticus JCSC5402 7389838 YP_002560037.1 CDS MCCL_0634 NC_011999.1 679169 680578 D similar to serine protease; hypothetical protein 679169..680578 Macrococcus caseolyticus JCSC5402 7390248 YP_002560038.1 CDS MCCL_0635 NC_011999.1 680591 681934 D Na+ transporting ATP synthase 680591..681934 Macrococcus caseolyticus JCSC5402 7390249 YP_002560039.1 CDS MCCL_0636 NC_011999.1 682016 683479 R similar to two-component sensor histidine kinase; hypothetical protein complement(682016..683479) Macrococcus caseolyticus JCSC5402 7390250 YP_002560040.1 CDS MCCL_0637 NC_011999.1 683521 684384 D similar to nucleotidase; hypothetical protein 683521..684384 Macrococcus caseolyticus JCSC5402 7390251 YP_002560041.1 CDS MCCL_0638 NC_011999.1 684441 685040 R similar to functionally unknown protein; hypothetical protein complement(684441..685040) Macrococcus caseolyticus JCSC5402 7390252 YP_002560042.1 CDS MCCL_0639 NC_011999.1 685291 685746 R similar to DNA-binding protein; hypothetical protein complement(685291..685746) Macrococcus caseolyticus JCSC5402 7390253 YP_002560043.1 CDS MCCL_0640 NC_011999.1 685959 686432 D no similarity; hypothetical protein 685959..686432 Macrococcus caseolyticus JCSC5402 7390254 YP_002560044.1 CDS MCCL_0641 NC_011999.1 686429 687985 R similar to peptidase; hypothetical protein complement(686429..687985) Macrococcus caseolyticus JCSC5402 7390255 YP_002560045.1 CDS MCCL_0642 NC_011999.1 688079 689068 R similar to functionally unknown protein; hypothetical protein complement(688079..689068) Macrococcus caseolyticus JCSC5402 7390256 YP_002560046.1 CDS MCCL_0643 NC_011999.1 689317 692970 R similar to bifunctional autolysin with amidase and hexosaminidase; hypothetical protein complement(689317..692970) Macrococcus caseolyticus JCSC5402 7390257 YP_002560047.1 CDS MCCL_0644 NC_011999.1 693184 693654 R similar to functionally unknown protein; hypothetical protein complement(693184..693654) Macrococcus caseolyticus JCSC5402 7390258 YP_002560048.1 CDS MCCL_0645 NC_011999.1 693666 694916 R similar to transcriptional regulator; hypothetical protein complement(693666..694916) Macrococcus caseolyticus JCSC5402 7390259 YP_002560049.1 CDS tagA NC_011999.1 695156 695923 D UDP-N-acetyl-D-mannosamine transferase 695156..695923 Macrococcus caseolyticus JCSC5402 7390260 YP_002560050.1 CDS tagG NC_011999.1 695993 696802 D teichoic acid translocation permease 695993..696802 Macrococcus caseolyticus JCSC5402 7390456 YP_002560051.1 CDS MCCL_0648 NC_011999.1 696813 699452 D similar to minor teichoic acid biosynthesis protein GgaB; hypothetical protein 696813..699452 Macrococcus caseolyticus JCSC5402 7390458 YP_002560052.1 CDS MCCL_0649 NC_011999.1 699475 700344 D UTP-glucose-1-phosphate uridyltransferase 699475..700344 Macrococcus caseolyticus JCSC5402 7390261 YP_002560053.1 CDS tagH NC_011999.1 700368 701171 D with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit 700368..701171 Macrococcus caseolyticus JCSC5402 7390262 YP_002560054.1 CDS tagD NC_011999.1 701201 701590 R teichoic acid biosynthesis protein TagD complement(701201..701590) Macrococcus caseolyticus JCSC5402 7390459 YP_002560055.1 CDS MCCL_0652 NC_011999.1 701587 702768 R similar to functionally unknown protein; hypothetical protein complement(701587..702768) Macrococcus caseolyticus JCSC5402 7390457 YP_002560056.1 CDS MCCL_0653 NC_011999.1 702832 703929 D similar to teichoic acid biosynthesis protein TagB; hypothetical protein 702832..703929 Macrococcus caseolyticus JCSC5402 7390263 YP_002560057.1 CDS MCCL_0654 NC_011999.1 703939 705045 D similar to teichoic acid biosynthesis protein tagX; hypothetical protein 703939..705045 Macrococcus caseolyticus JCSC5402 7390264 YP_002560058.1 CDS MCCL_0655 NC_011999.1 705059 706492 D similar to galactosamine-containing minor teichoic acid biosynthesis protein; hypothetical protein 705059..706492 Macrococcus caseolyticus JCSC5402 7390265 YP_002560059.1 CDS MCCL_0656 NC_011999.1 706535 707479 R NAD dependent epimerase/dehydratase family protein complement(706535..707479) Macrococcus caseolyticus JCSC5402 7390266 YP_002560060.1 CDS MCCL_0657 NC_011999.1 707566 708618 R similar to functionally unknown protein; hypothetical protein complement(707566..708618) Macrococcus caseolyticus JCSC5402 7390267 YP_002560061.1 CDS capO NC_011999.1 708915 710171 D capsular polysaccharide synthesis enzyme cap5O 708915..710171 Macrococcus caseolyticus JCSC5402 7390268 YP_002560062.1 CDS MCCL_0659 NC_011999.1 710225 711412 D group 1 family glycosyl transferase 710225..711412 Macrococcus caseolyticus JCSC5402 7390509 YP_002560063.1 CDS MCCL_0660 NC_011999.1 711435 712241 D similar to teichoic acid ABC transporter permease; hypothetical protein 711435..712241 Macrococcus caseolyticus JCSC5402 7390269 YP_002560064.1 CDS MCCL_0661 NC_011999.1 712255 713388 D no similarity; hypothetical protein 712255..713388 Macrococcus caseolyticus JCSC5402 7390270 YP_002560065.1 CDS MCCL_0662 NC_011999.1 713385 713744 D no similarity; hypothetical protein 713385..713744 Macrococcus caseolyticus JCSC5402 7390271 YP_002560066.1 CDS MCCL_0663 NC_011999.1 713755 714393 D no similarity; hypothetical protein 713755..714393 Macrococcus caseolyticus JCSC5402 7390272 YP_002560067.1 CDS MCCL_0664 NC_011999.1 714403 716583 D no similarity; hypothetical protein 714403..716583 Macrococcus caseolyticus JCSC5402 7390273 YP_002560068.1 CDS MCCL_0665 NC_011999.1 716555 717508 D similar to teichoic acids export ATP-binding protein tagH; hypothetical protein 716555..717508 Macrococcus caseolyticus JCSC5402 7390274 YP_002560069.1 CDS MCCL_0666 NC_011999.1 717526 718680 D similar to group 1 glycosyl transferase; hypothetical protein 717526..718680 Macrococcus caseolyticus JCSC5402 7390275 YP_002560070.1 CDS MCCL_0667 NC_011999.1 718884 721004 D no similarity; hypothetical protein 718884..721004 Macrococcus caseolyticus JCSC5402 7390276 YP_002560071.1 CDS MCCL_0668 NC_011999.1 721149 721826 D similar to capsular polysaccharide biosynthesis protein CapA; hypothetical protein 721149..721826 Macrococcus caseolyticus JCSC5402 7390277 YP_002560072.1 CDS MCCL_0669 NC_011999.1 721844 722524 D capsular polysaccharide biosynthesis protein CapB 721844..722524 Macrococcus caseolyticus JCSC5402 7390278 YP_002560073.1 CDS MCCL_0670 NC_011999.1 722575 724365 D capsular polysaccharide biosynthesis protein CapD 722575..724365 Macrococcus caseolyticus JCSC5402 7390279 YP_002560074.1 CDS MCCL_0671 NC_011999.1 724374 725549 D similar to capsular polysaccharide biosynthesis protein CapF; hypothetical protein 724374..725549 Macrococcus caseolyticus JCSC5402 7390280 YP_002560075.1 CDS MCCL_0672 NC_011999.1 725638 726789 D no similarity; hypothetical protein 725638..726789 Macrococcus caseolyticus JCSC5402 7390281 YP_002560076.1 CDS MCCL_0673 NC_011999.1 726773 727321 D similar to galactoside O-acetyltransferase; hypothetical protein 726773..727321 Macrococcus caseolyticus JCSC5402 7390282 YP_002560077.1 CDS capI NC_011999.1 727324 728334 D capsular polysaccharide biosynthesis protein CapI 727324..728334 Macrococcus caseolyticus JCSC5402 7390283 YP_002560078.1 CDS capL NC_011999.1 728353 729627 D capsular polysaccharide biosynthesis protein CapL 728353..729627 Macrococcus caseolyticus JCSC5402 7390507 YP_002560079.1 CDS MCCL_0676 NC_011999.1 729642 730793 D similar to capsular polysaccharide biosynthesis protein; hypothetical protein 729642..730793 Macrococcus caseolyticus JCSC5402 7390508 YP_002560080.1 CDS MCCL_0677 NC_011999.1 730798 731688 D similar to functionally unknown protein; hypothetical protein 730798..731688 Macrococcus caseolyticus JCSC5402 7390284 YP_002560081.1 CDS MCCL_0678 NC_011999.1 731698 732261 D capsular polysaccharide synthesis protein CapM 731698..732261 Macrococcus caseolyticus JCSC5402 7390285 YP_002560082.1 CDS MCCL_0679 NC_011999.1 732518 733762 D predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 732518..733762 Macrococcus caseolyticus JCSC5402 7390286 YP_002560083.1 CDS MCCL_0680 NC_011999.1 733726 734037 D similar to intercellular adhesion protein IcaD; hypothetical protein 733726..734037 Macrococcus caseolyticus JCSC5402 7390287 YP_002560084.1 CDS MCCL_0681 NC_011999.1 734024 734836 D similar to intercellular adhesion protein IcaB; hypothetical protein 734024..734836 Macrococcus caseolyticus JCSC5402 7390288 YP_002560085.1 CDS MCCL_0682 NC_011999.1 734838 735869 D similar to intercellular adhesion protein IcaC; hypothetical protein 734838..735869 Macrococcus caseolyticus JCSC5402 7390289 YP_002560086.1 CDS MCCL_0683 NC_011999.1 735879 736295 R similar to functionally unknown protein; hypothetical protein complement(735879..736295) Macrococcus caseolyticus JCSC5402 7390290 YP_002560087.1 CDS MCCL_0684 NC_011999.1 736435 737577 D similar to flavohemoprotein; hypothetical protein 736435..737577 Macrococcus caseolyticus JCSC5402 7389882 YP_002560088.1 CDS MCCL_0685 NC_011999.1 737790 738734 D similar to functionally unknown protein; hypothetical protein 737790..738734 Macrococcus caseolyticus JCSC5402 7389883 YP_002560089.1 CDS folD NC_011999.1 738887 739735 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(738887..739735) Macrococcus caseolyticus JCSC5402 7389884 YP_002560090.1 CDS MCCL_0687 NC_011999.1 739985 740422 D similar to phosphoribosylaminoimidazole carboxylase catalytic subunit; hypothetical protein 739985..740422 Macrococcus caseolyticus JCSC5402 7390572 YP_002560091.1 CDS MCCL_0688 NC_011999.1 740409 741527 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 740409..741527 Macrococcus caseolyticus JCSC5402 7389885 YP_002560092.1 CDS purC NC_011999.1 741524 742225 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 741524..742225 Macrococcus caseolyticus JCSC5402 7389886 YP_002560093.1 CDS MCCL_0690 NC_011999.1 742227 742487 D similar to functionally unknown protein; hypothetical protein 742227..742487 Macrococcus caseolyticus JCSC5402 7389849 YP_002560094.1 CDS purQ NC_011999.1 742487 743149 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 742487..743149 Macrococcus caseolyticus JCSC5402 7389887 YP_002560095.1 CDS purL NC_011999.1 743152 745338 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 743152..745338 Macrococcus caseolyticus JCSC5402 7389856 YP_002560096.1 CDS purF NC_011999.1 745296 746735 D amidophosphoribosyltransferase 745296..746735 Macrococcus caseolyticus JCSC5402 7389853 YP_002560097.1 CDS purM NC_011999.1 746738 747760 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 746738..747760 Macrococcus caseolyticus JCSC5402 7389851 YP_002560098.1 CDS purN NC_011999.1 747762 748328 D phosphoribosylglycinamide formyltransferase 747762..748328 Macrococcus caseolyticus JCSC5402 7389854 YP_002560099.1 CDS purH NC_011999.1 748340 749818 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 748340..749818 Macrococcus caseolyticus JCSC5402 7389855 YP_002560100.1 CDS purD NC_011999.1 749828 751063 D phosphoribosylamine-glycine ligase 749828..751063 Macrococcus caseolyticus JCSC5402 7389852 YP_002560101.1 CDS MCCL_0698 NC_011999.1 751410 752672 D similar to functionally unknown protein; hypothetical protein 751410..752672 Macrococcus caseolyticus JCSC5402 7389850 YP_002560102.1 CDS MCCL_0699 NC_011999.1 752864 754030 D similar to functionally unknown protein; hypothetical protein 752864..754030 Macrococcus caseolyticus JCSC5402 7389888 YP_002560103.1 CDS MCCL_0700 NC_011999.1 754090 754620 D similar to functionally unknown protein; hypothetical protein 754090..754620 Macrococcus caseolyticus JCSC5402 7389889 YP_002560104.1 CDS ptsI NC_011999.1 755043 756752 D phosphoenolpyruvate-protein phosphatase 755043..756752 Macrococcus caseolyticus JCSC5402 7389890 YP_002560105.1 CDS MCCL_0702 NC_011999.1 756841 757722 R similar to phosphoesterase; hypothetical protein complement(756841..757722) Macrococcus caseolyticus JCSC5402 7389847 YP_002560106.1 CDS cyoB NC_011999.1 758025 759377 D cytochrome D ubiquinol oxidase subunit I 758025..759377 Macrococcus caseolyticus JCSC5402 7389891 YP_002560107.1 CDS cyoA NC_011999.1 759377 760396 D cytochrome D ubiquinol oxidase subunit II 759377..760396 Macrococcus caseolyticus JCSC5402 7390532 YP_002560108.1 CDS MCCL_0705 NC_011999.1 760412 761074 D potassium transporter NAD-binding component 760412..761074 Macrococcus caseolyticus JCSC5402 7390531 YP_002560109.1 CDS MCCL_0706 NC_011999.1 761143 762831 R metallo-beta-lactamase superfamily protein complement(761143..762831) Macrococcus caseolyticus JCSC5402 7389892 YP_002560110.1 CDS MCCL_0707 NC_011999.1 763252 764031 D similar to HAD superfamily hydrolase; hypothetical protein 763252..764031 Macrococcus caseolyticus JCSC5402 7389893 YP_002560111.1 CDS def NC_011999.1 764322 764876 R formylmethionine deformylase complement(764322..764876) Macrococcus caseolyticus JCSC5402 7389894 YP_002560112.1 CDS MCCL_0709 NC_011999.1 764986 765618 D similar to functionally unknown protein; hypothetical protein 764986..765618 Macrococcus caseolyticus JCSC5402 7390540 YP_002560113.1 CDS pdhA NC_011999.1 765795 766910 D pyruvate dehydrogenase E1 component alpha subunit 765795..766910 Macrococcus caseolyticus JCSC5402 7389895 YP_002560114.1 CDS pdhB NC_011999.1 766914 767891 D pyruvate dehydrogenase E1 component beta subunit 766914..767891 Macrococcus caseolyticus JCSC5402 7389806 YP_002560115.1 CDS pdhC NC_011999.1 767985 769268 D branched-chain alpha-keto acid dehydrogenase subunit E2 767985..769268 Macrococcus caseolyticus JCSC5402 7389807 YP_002560116.1 CDS pdhD NC_011999.1 769273 770679 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 769273..770679 Macrococcus caseolyticus JCSC5402 7389808 YP_002560117.1 CDS MCCL_0714 NC_011999.1 771121 771663 D similar to functionally unknown protein; hypothetical protein 771121..771663 Macrococcus caseolyticus JCSC5402 7389809 YP_002560118.1 CDS potA NC_011999.1 771673 772755 D spermidine/putrescine ABC transporter ATP-binding protein 771673..772755 Macrococcus caseolyticus JCSC5402 7389896 YP_002560119.1 CDS potB NC_011999.1 772757 773563 D spermidine/putrescine ABC transporter permease 772757..773563 Macrococcus caseolyticus JCSC5402 7389829 YP_002560120.1 CDS potC NC_011999.1 773560 774369 D spermidine/putrescine ABC transporter permease 773560..774369 Macrococcus caseolyticus JCSC5402 7389830 YP_002560121.1 CDS potD NC_011999.1 774366 775439 D spermidine/putrescine-binding protein 774366..775439 Macrococcus caseolyticus JCSC5402 7389831 YP_002560122.1 CDS MCCL_0719 NC_011999.1 775450 776298 D similar to functionally unknown protein; hypothetical protein 775450..776298 Macrococcus caseolyticus JCSC5402 7389832 YP_002560123.1 CDS MCCL_0720 NC_011999.1 776376 777044 R similar to functionally unknown protein; hypothetical protein complement(776376..777044) Macrococcus caseolyticus JCSC5402 7389897 YP_002560124.1 CDS MCCL_0721 NC_011999.1 777044 780010 R formate dehydrogenase alpha subunit complement(777044..780010) Macrococcus caseolyticus JCSC5402 7389898 YP_002560125.1 CDS MCCL_0722 NC_011999.1 780189 780800 R similar to functionally unknown protein; hypothetical protein complement(780189..780800) Macrococcus caseolyticus JCSC5402 7389899 YP_002560126.1 CDS MCCL_0723 NC_011999.1 781141 781740 D inositol monophosphatase family protein 781141..781740 Macrococcus caseolyticus JCSC5402 7389900 YP_002560127.1 CDS MCCL_0724 NC_011999.1 782065 782616 R no similarity; hypothetical protein complement(782065..782616) Macrococcus caseolyticus JCSC5402 7389901 YP_002560128.1 CDS MCCL_0725 NC_011999.1 783106 784950 D BipA family GTPase 783106..784950 Macrococcus caseolyticus JCSC5402 7389902 YP_002560129.1 CDS MCCL_0726 NC_011999.1 784961 785305 D Mn2+/Zn2+ ABC transporter permease 784961..785305 Macrococcus caseolyticus JCSC5402 7389903 YP_002560130.1 CDS MCCL_0727 NC_011999.1 785333 785812 R similar to functionally unknown protein; hypothetical protein complement(785333..785812) Macrococcus caseolyticus JCSC5402 7389904 YP_002560131.1 CDS MCCL_0728 NC_011999.1 786253 787452 D FtsW/RodA/SpoVE family cell division protein 786253..787452 Macrococcus caseolyticus JCSC5402 7389905 YP_002560132.1 CDS MCCL_0729 NC_011999.1 787619 791041 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 787619..791041 Macrococcus caseolyticus JCSC5402 7389906 YP_002560133.1 CDS ctaA NC_011999.1 791099 792001 R cytochrome aa3 controlling protein complement(791099..792001) Macrococcus caseolyticus JCSC5402 7389907 YP_002560134.1 CDS ctaB NC_011999.1 792251 793171 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 792251..793171 Macrococcus caseolyticus JCSC5402 7390525 YP_002560135.1 CDS ctaC NC_011999.1 793203 794264 D cytochrome c oxidase polypeptide II precursor (Cytochrome aa3 subunit 2) 793203..794264 Macrococcus caseolyticus JCSC5402 7390526 YP_002560136.1 CDS ctaD NC_011999.1 794287 796179 D cytochrome c oxidase subunit I 794287..796179 Macrococcus caseolyticus JCSC5402 7390527 YP_002560137.1 CDS ctaE NC_011999.1 796179 796808 D cytochrome c oxidase subunit III 796179..796808 Macrococcus caseolyticus JCSC5402 7390528 YP_002560138.1 CDS MCCL_0735 NC_011999.1 796808 797155 D similar to cytochrome c oxidase, subunit IV; hypothetical protein 796808..797155 Macrococcus caseolyticus JCSC5402 7390529 YP_002560139.1 CDS MCCL_0736 NC_011999.1 797251 798231 D similar to CtaG protein; hypothetical protein 797251..798231 Macrococcus caseolyticus JCSC5402 7389908 YP_002560140.1 CDS MCCL_0737 NC_011999.1 798241 798702 D similar to functionally unknown protein; hypothetical protein 798241..798702 Macrococcus caseolyticus JCSC5402 7389909 YP_002560141.1 CDS MCCL_0738 NC_011999.1 798759 799808 R similar to functionally unknown protein; hypothetical protein complement(798759..799808) Macrococcus caseolyticus JCSC5402 7389910 YP_002560142.1 CDS MCCL_0739 NC_011999.1 799878 800237 R similar to functionally unknown protein; hypothetical protein complement(799878..800237) Macrococcus caseolyticus JCSC5402 7389911 YP_002560143.1 CDS MCCL_0740 NC_011999.1 800378 801448 D similar to functionally unknown protein; hypothetical protein 800378..801448 Macrococcus caseolyticus JCSC5402 7389912 YP_002560144.1 CDS MCCL_0741 NC_011999.1 801460 801882 D similar to functionally unknown protein; hypothetical protein 801460..801882 Macrococcus caseolyticus JCSC5402 7389913 YP_002560145.1 CDS MCCL_0742 NC_011999.1 801891 802454 D no similarity; hypothetical protein 801891..802454 Macrococcus caseolyticus JCSC5402 7389914 YP_002560146.1 CDS MCCL_0743 NC_011999.1 802494 803405 R similar to functionally unknown protein; hypothetical protein complement(802494..803405) Macrococcus caseolyticus JCSC5402 7389915 YP_002560147.1 CDS MCCL_0744 NC_011999.1 803717 804103 R similar to functionally unknown protein; hypothetical protein complement(803717..804103) Macrococcus caseolyticus JCSC5402 7389916 YP_002560148.1 CDS MCCL_0745 NC_011999.1 804171 804707 D similar to methylase; hypothetical protein 804171..804707 Macrococcus caseolyticus JCSC5402 7389917 YP_002560149.1 CDS MCCL_0746 NC_011999.1 804704 805201 D phosphopantetheine adenyltransferase 804704..805201 Macrococcus caseolyticus JCSC5402 7389918 YP_002560150.1 CDS MCCL_0747 NC_011999.1 805203 806276 R similar to functionally unknown protein; hypothetical protein complement(805203..806276) Macrococcus caseolyticus JCSC5402 7389919 YP_002560151.1 CDS MCCL_0748 NC_011999.1 806401 806916 D similar to functionally unknown protein; hypothetical protein 806401..806916 Macrococcus caseolyticus JCSC5402 7389920 YP_002560152.1 CDS MCCL_0749 NC_011999.1 807254 808843 D similar to functionally unknown protein; hypothetical protein 807254..808843 Macrococcus caseolyticus JCSC5402 7389921 YP_002560153.1 CDS MCCL_0750 NC_011999.1 808982 809413 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 808982..809413 Macrococcus caseolyticus JCSC5402 7389922 YP_002560154.1 CDS mraW NC_011999.1 809423 810355 D S-adenosyl-methyltransferase MraW 809423..810355 Macrococcus caseolyticus JCSC5402 7389923 YP_002560155.1 CDS ftsL NC_011999.1 810368 810736 D cell division protein FtsL 810368..810736 Macrococcus caseolyticus JCSC5402 7390705 YP_002560156.1 CDS pbpA NC_011999.1 810723 812972 D penicillin-binding protein 1 810723..812972 Macrococcus caseolyticus JCSC5402 7390579 YP_002560157.1 CDS mraY NC_011999.1 813009 813977 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 813009..813977 Macrococcus caseolyticus JCSC5402 7389801 YP_002560158.1 CDS murD NC_011999.1 813978 815315 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 813978..815315 Macrococcus caseolyticus JCSC5402 7390706 YP_002560159.1 CDS MCCL_0756 NC_011999.1 815323 816213 D similar to cell division initiation protein ftsQ; hypothetical protein 815323..816213 Macrococcus caseolyticus JCSC5402 7390709 YP_002560160.1 CDS ftsA NC_011999.1 816333 817709 D cell division protein FtsA 816333..817709 Macrococcus caseolyticus JCSC5402 7389924 YP_002560161.1 CDS ftsZ NC_011999.1 817742 818875 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 817742..818875 Macrococcus caseolyticus JCSC5402 7390576 YP_002560162.1 CDS MCCL_0759 NC_011999.1 818820 819749 D similar to functionally unknown protein; hypothetical protein 818820..819749 Macrococcus caseolyticus JCSC5402 7390581 YP_002560163.1 CDS MCCL_0760 NC_011999.1 819727 820389 D similar to functionally unknown protein; hypothetical protein 819727..820389 Macrococcus caseolyticus JCSC5402 7389925 YP_002560164.1 CDS MCCL_0761 NC_011999.1 820399 820920 D YlmF protein 820399..820920 Macrococcus caseolyticus JCSC5402 7389926 YP_002560165.1 CDS MCCL_0762 NC_011999.1 821285 822058 D similar to functionally unknown protein; hypothetical protein 821285..822058 Macrococcus caseolyticus JCSC5402 7389927 YP_002560166.1 CDS MCCL_0763 NC_011999.1 822073 822639 D cell-division initiation protein 822073..822639 Macrococcus caseolyticus JCSC5402 7389928 YP_002560167.1 CDS ileS NC_011999.1 822890 825634 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 822890..825634 Macrococcus caseolyticus JCSC5402 7389929 YP_002560169.1 CDS lspA NC_011999.1 825763 826254 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 825763..826254 Macrococcus caseolyticus JCSC5402 7391137 YP_002560170.1 CDS MCCL_0767 NC_011999.1 826241 827146 D similar to ribosomal large subunit psudouridine synthase D; hypothetical protein 826241..827146 Macrococcus caseolyticus JCSC5402 7390671 YP_002560171.1 CDS pyrR NC_011999.1 827302 827826 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 827302..827826 Macrococcus caseolyticus JCSC5402 7389930 YP_002560172.1 CDS pyrP NC_011999.1 827933 829243 D uracil permease 827933..829243 Macrococcus caseolyticus JCSC5402 7389869 YP_002560173.1 CDS pyrB NC_011999.1 829255 830136 D aspartate carbamoyltransferase catalytic subunit 829255..830136 Macrococcus caseolyticus JCSC5402 7389868 YP_002560174.1 CDS pyrC NC_011999.1 830148 831431 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 830148..831431 Macrococcus caseolyticus JCSC5402 7389860 YP_002560175.1 CDS pyrAA NC_011999.1 831424 832518 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 831424..832518 Macrococcus caseolyticus JCSC5402 7389861 YP_002560176.1 CDS carB NC_011999.1 832511 835684 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 832511..835684 Macrococcus caseolyticus JCSC5402 7389858 YP_002560177.1 CDS pyrK NC_011999.1 835708 836454 D dihydroorotate dehydrogenase electron transfer subunit 835708..836454 Macrococcus caseolyticus JCSC5402 7389859 YP_002560178.1 CDS pyrD NC_011999.1 836451 837368 D dihydroorotate dehydrogenase 836451..837368 Macrococcus caseolyticus JCSC5402 7389867 YP_002560179.1 CDS pyrF NC_011999.1 837365 838063 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 837365..838063 Macrococcus caseolyticus JCSC5402 7389862 YP_002560180.1 CDS pyrE NC_011999.1 838053 838664 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 838053..838664 Macrococcus caseolyticus JCSC5402 7389864 YP_002560181.1 CDS MCCL_0778 NC_011999.1 838727 839446 D no similarity; hypothetical protein 838727..839446 Macrococcus caseolyticus JCSC5402 7389863 YP_002560182.1 CDS MCCL_0779 NC_011999.1 839499 840746 R phosphomannomutase complement(839499..840746) Macrococcus caseolyticus JCSC5402 7389931 YP_002560183.1 CDS MCCL_0780 NC_011999.1 840727 841146 R phosphomannomutase complement(840727..841146) Macrococcus caseolyticus JCSC5402 7389932 YP_002560184.1 CDS MCCL_0781 NC_011999.1 841226 843265 R similar to pullulanase; hypothetical protein complement(841226..843265) Macrococcus caseolyticus JCSC5402 7389933 YP_002560185.1 CDS glgB NC_011999.1 843462 845384 D 1,4-alpha-glucan branching enzyme 843462..845384 Macrococcus caseolyticus JCSC5402 7389934 YP_002560186.1 CDS glgC NC_011999.1 845394 846563 D glucose-1-phosphate adenylyltransferase 845394..846563 Macrococcus caseolyticus JCSC5402 7391090 YP_002560187.1 CDS glgD NC_011999.1 846563 847666 D glycogen biosynthesis 846563..847666 Macrococcus caseolyticus JCSC5402 7391091 YP_002560188.1 CDS glgA NC_011999.1 847681 849084 D glycogen synthase 847681..849084 Macrococcus caseolyticus JCSC5402 7391092 YP_002560189.1 CDS glgP NC_011999.1 849095 851500 D glycogen phosphorylase 849095..851500 Macrococcus caseolyticus JCSC5402 7391089 YP_002560190.1 CDS tenA NC_011999.1 851856 852581 D transcriptional regulator of extracellular enzyme genes 851856..852581 Macrococcus caseolyticus JCSC5402 7391093 YP_002560191.1 CDS MCCL_0788 NC_011999.1 852761 853771 D regulatory protein 852761..853771 Macrococcus caseolyticus JCSC5402 7390461 YP_002560192.1 CDS MCCL_0789 NC_011999.1 853868 854452 D type-1 signal peptidase 1B 853868..854452 Macrococcus caseolyticus JCSC5402 7389935 YP_002560193.1 CDS phoB NC_011999.1 854605 856002 D alkaline phosphatase 854605..856002 Macrococcus caseolyticus JCSC5402 7389936 YP_002560194.1 CDS sceD NC_011999.1 856050 856745 R SceD precursor complement(856050..856745) Macrococcus caseolyticus JCSC5402 7389820 YP_002560195.1 CDS clpL NC_011999.1 857400 859451 D ATP-dependent protease ATP-binding subunit ClpL 857400..859451 Macrococcus caseolyticus JCSC5402 7389567 YP_002560196.1 CDS fbe NC_011999.1 859546 861228 R fibrinogen binding protein complement(859546..861228) Macrococcus caseolyticus JCSC5402 7390518 YP_002560197.1 CDS gmk NC_011999.1 861362 861982 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 861362..861982 Macrococcus caseolyticus JCSC5402 7390565 YP_002560198.1 CDS coaBC NC_011999.1 862247 863425 D phosphopantothenoylcysteine decarboxylase 862247..863425 Macrococcus caseolyticus JCSC5402 7391104 YP_002560199.1 CDS priA NC_011999.1 863422 865803 D primosomal protein 863422..865803 Macrococcus caseolyticus JCSC5402 7390522 YP_002560200.1 CDS def NC_011999.1 865956 866366 D polypeptide deformylase 865956..866366 Macrococcus caseolyticus JCSC5402 7389839 YP_002560201.1 CDS fmt NC_011999.1 866435 867367 D methionyl-tRNA formyltransferase 866435..867367 Macrococcus caseolyticus JCSC5402 7390541 YP_002560202.1 CDS MCCL_0799 NC_011999.1 867357 868661 D similar to tRNA and rRNA cytosine-C5-methylase; hypothetical protein 867357..868661 Macrococcus caseolyticus JCSC5402 7390571 YP_002560203.1 CDS MCCL_0800 NC_011999.1 868661 869752 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 868661..869752 Macrococcus caseolyticus JCSC5402 7389937 YP_002560204.1 CDS MCCL_0801 NC_011999.1 869757 870494 D similar to protein phosphatase; hypothetical protein 869757..870494 Macrococcus caseolyticus JCSC5402 7389938 YP_002560205.1 CDS MCCL_0802 NC_011999.1 870496 872463 D similar to protein kinase; hypothetical protein 870496..872463 Macrococcus caseolyticus JCSC5402 7389939 YP_002560206.1 CDS MCCL_0803 NC_011999.1 872529 873404 D no similarity; hypothetical protein 872529..873404 Macrococcus caseolyticus JCSC5402 7389940 YP_002560207.1 CDS MCCL_0804 NC_011999.1 873405 874730 D similar to cytochrome P450 family protein; hypothetical protein 873405..874730 Macrococcus caseolyticus JCSC5402 7389941 YP_002560208.1 CDS MCCL_0805 NC_011999.1 875501 876376 D similar to functionally unknown protein; hypothetical protein 875501..876376 Macrococcus caseolyticus JCSC5402 7389942 YP_002560209.1 CDS cfxE NC_011999.1 876376 877026 D ribulose-5-phosphate 3-epimerase 876376..877026 Macrococcus caseolyticus JCSC5402 7389943 YP_002560210.1 CDS MCCL_0807 NC_011999.1 877023 877661 D similar to functionally unknown protein; hypothetical protein 877023..877661 Macrococcus caseolyticus JCSC5402 7390513 YP_002560211.1 CDS MCCL_0808 NC_011999.1 878537 880183 D similar to functionally unknown protein; hypothetical protein 878537..880183 Macrococcus caseolyticus JCSC5402 7389944 YP_002560212.1 CDS sdhB NC_011999.1 880251 880916 D L-serine dehydratase beta subunit 880251..880916 Macrococcus caseolyticus JCSC5402 7389945 YP_002560213.1 CDS sdhA NC_011999.1 880929 881819 D L-serine deaminase alpha subunit 880929..881819 Macrococcus caseolyticus JCSC5402 7389570 YP_002560214.1 CDS recG NC_011999.1 881788 883824 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 881788..883824 Macrococcus caseolyticus JCSC5402 7389568 YP_002560215.1 CDS MCCL_0812 NC_011999.1 883837 884487 D similar to sortase; hypothetical protein 883837..884487 Macrococcus caseolyticus JCSC5402 7389878 YP_002560216.1 CDS MCCL_0813 NC_011999.1 884630 885193 D negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 884630..885193 Macrococcus caseolyticus JCSC5402 7389946 YP_002560217.1 CDS MCCL_0814 NC_011999.1 885196 886176 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 885196..886176 Macrococcus caseolyticus JCSC5402 7389947 YP_002560218.1 CDS fabD NC_011999.1 886169 887065 D malonyl CoA-acyl carrier protein transacylase 886169..887065 Macrococcus caseolyticus JCSC5402 7389948 YP_002560219.1 CDS fabG NC_011999.1 887055 887801 D 3-oxoacyl-ACP reductase 887055..887801 Macrococcus caseolyticus JCSC5402 7390562 YP_002560220.1 CDS rnc NC_011999.1 888218 888946 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 888218..888946 Macrococcus caseolyticus JCSC5402 7390563 YP_002560221.1 CDS MCCL_0818 NC_011999.1 888946 892524 D similar to chromosome segregation SMC protein; hypothetical protein 888946..892524 Macrococcus caseolyticus JCSC5402 7389512 YP_002560222.1 CDS ftsY NC_011999.1 892521 893771 D signal recognition particle GTPase FtsY 892521..893771 Macrococcus caseolyticus JCSC5402 7389949 YP_002560223.1 CDS MCCL_0820 NC_011999.1 893764 894108 D similar to functionally unknown protein; DNA-binding protein 893764..894108 Macrococcus caseolyticus JCSC5402 7390580 YP_002560224.1 CDS ffh NC_011999.1 894120 895472 D signal recognition particle protein 894120..895472 Macrococcus caseolyticus JCSC5402 7389950 YP_002560225.1 CDS rimM NC_011999.1 896171 896668 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 896171..896668 Macrococcus caseolyticus JCSC5402 7390569 YP_002560226.1 CDS trmD NC_011999.1 896668 897390 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 896668..897390 Macrococcus caseolyticus JCSC5402 7389510 YP_002560227.1 CDS rplS NC_011999.1 897513 897860 D 50S ribosomal protein L19 897513..897860 Macrococcus caseolyticus JCSC5402 7390481 YP_002560228.1 CDS MCCL_0825 NC_011999.1 897899 900478 R similar to functionally unknown protein; hypothetical protein complement(897899..900478) Macrococcus caseolyticus JCSC5402 7389530 YP_002560229.1 CDS MCCL_0826 NC_011999.1 900462 903059 R similar to functionally unknown protein; hypothetical protein complement(900462..903059) Macrococcus caseolyticus JCSC5402 7389951 YP_002560230.1 CDS MCCL_0827 NC_011999.1 903060 903437 R similar to functionally unknown protein; hypothetical protein complement(903060..903437) Macrococcus caseolyticus JCSC5402 7389952 YP_002560231.1 CDS MCCL_0828 NC_011999.1 903434 904390 R glycosyl transferase family 2 complement(903434..904390) Macrococcus caseolyticus JCSC5402 7389953 YP_002560232.1 CDS rbgA NC_011999.1 904513 905385 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 904513..905385 Macrococcus caseolyticus JCSC5402 7389954 YP_002560233.1 CDS rnhB NC_011999.1 905375 906169 D ribonuclease HII 905375..906169 Macrococcus caseolyticus JCSC5402 7389955 YP_002560234.1 CDS sucC NC_011999.1 906267 907436 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 906267..907436 Macrococcus caseolyticus JCSC5402 7389513 YP_002560235.1 CDS sucD NC_011999.1 907452 908360 D succinyl-CoA synthetase alpha subunit 907452..908360 Macrococcus caseolyticus JCSC5402 7389583 YP_002560236.1 CDS MCCL_0833 NC_011999.1 908491 909378 D similar to DNA processing Smf protein; hypothetical protein 908491..909378 Macrococcus caseolyticus JCSC5402 7389584 YP_002560237.1 CDS topA NC_011999.1 909469 911532 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 909469..911532 Macrococcus caseolyticus JCSC5402 7389956 YP_002560238.1 CDS gid NC_011999.1 911697 912998 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 911697..912998 Macrococcus caseolyticus JCSC5402 7390478 YP_002560239.1 CDS xerC NC_011999.1 913058 913930 D tyrosine recombinase XerC 913058..913930 Macrococcus caseolyticus JCSC5402 7391085 YP_002560240.1 CDS hslV NC_011999.1 913942 914484 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 913942..914484 Macrococcus caseolyticus JCSC5402 7390501 YP_002560241.1 CDS hslU NC_011999.1 914495 915868 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 914495..915868 Macrococcus caseolyticus JCSC5402 7391134 YP_002560242.1 CDS codY NC_011999.1 915886 916659 D CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 915886..916659 Macrococcus caseolyticus JCSC5402 7391133 YP_002560243.1 CDS rpsB NC_011999.1 916875 917642 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 916875..917642 Macrococcus caseolyticus JCSC5402 7390523 YP_002560244.1 CDS tsf NC_011999.1 917768 918649 D elongation factor EF-Ts 917768..918649 Macrococcus caseolyticus JCSC5402 7389548 YP_002560245.1 CDS pyrH NC_011999.1 918794 919516 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 918794..919516 Macrococcus caseolyticus JCSC5402 7390489 YP_002560246.1 CDS frr NC_011999.1 919542 920099 D ribosome recycling factor 919542..920099 Macrococcus caseolyticus JCSC5402 7389866 YP_002560247.1 CDS uppS NC_011999.1 920241 920990 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 920241..920990 Macrococcus caseolyticus JCSC5402 7390573 YP_002560248.1 CDS cdsA NC_011999.1 921001 921786 D phosphatidate cytidylyltransferase 921001..921786 Macrococcus caseolyticus JCSC5402 7390494 YP_002560249.1 CDS MCCL_0846 NC_011999.1 921939 923069 D 1-deoxy-D-xylulose 5-phosphate reductoisomerase 921939..923069 Macrococcus caseolyticus JCSC5402 7390512 YP_002560250.1 CDS MCCL_0847 NC_011999.1 923072 924352 D zinc metalloprotease yluc 923072..924352 Macrococcus caseolyticus JCSC5402 7389957 YP_002560251.1 CDS proS NC_011999.1 924436 926142 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 924436..926142 Macrococcus caseolyticus JCSC5402 7389958 YP_002560252.1 CDS polC NC_011999.1 926214 930518 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 926214..930518 Macrococcus caseolyticus JCSC5402 7389840 YP_002560253.1 CDS MCCL_0850 NC_011999.1 930633 931100 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 930633..931100 Macrococcus caseolyticus JCSC5402 7389826 YP_002560254.1 CDS nusA NC_011999.1 931110 932171 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 931110..932171 Macrococcus caseolyticus JCSC5402 7389959 YP_002560255.1 CDS MCCL_0852 NC_011999.1 932465 932797 D similar to functionally unknown protein; hypothetical protein 932465..932797 Macrococcus caseolyticus JCSC5402 7390739 YP_002560256.1 CDS infB NC_011999.1 932790 934970 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 932790..934970 Macrococcus caseolyticus JCSC5402 7389960 YP_002560257.1 CDS MCCL_0854 NC_011999.1 935176 936195 D similar to integrase/recombinase; hypothetical protein 935176..936195 Macrococcus caseolyticus JCSC5402 7391144 YP_002560258.1 CDS MCCL_0855 NC_011999.1 937710 938108 R transposase complement(937710..938108) Macrococcus caseolyticus JCSC5402 7389961 YP_002560259.1 CDS MCCL_0856 NC_011999.1 938383 938880 D spermidine acetyltransferase 938383..938880 Macrococcus caseolyticus JCSC5402 7389962 YP_002560260.1 CDS ilvA NC_011999.1 939835 941097 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(939835..941097) Macrococcus caseolyticus JCSC5402 7390292 YP_002560261.1 CDS ilvC NC_011999.1 941110 942102 R alpha-keto-beta-hydroxylacil reductoisomerase complement(941110..942102) Macrococcus caseolyticus JCSC5402 7391138 YP_002560262.1 CDS ilvB NC_011999.1 942344 944011 R acetolactate synthase large subunit complement(942344..944011) Macrococcus caseolyticus JCSC5402 7391140 YP_002560263.1 CDS ilvD NC_011999.1 944023 945711 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(944023..945711) Macrococcus caseolyticus JCSC5402 7391139 YP_002560264.1 CDS rbfA NC_011999.1 946062 946406 D ribosome-binding factor A 946062..946406 Macrococcus caseolyticus JCSC5402 7391141 YP_002560265.1 CDS truB NC_011999.1 946464 947360 D tRNA pseudouridine 5S synthase 946464..947360 Macrococcus caseolyticus JCSC5402 7389875 YP_002560266.1 CDS ribC NC_011999.1 947370 948323 D riboflavin kinase 947370..948323 Macrococcus caseolyticus JCSC5402 7390486 YP_004782093.1 CDS MCCL_0863a NC_011999.1 948431 948700 D ribosonal protein S15 948431..948700 Macrococcus caseolyticus JCSC5402 11040774 YP_002560267.1 CDS pnpA NC_011999.1 948815 950926 D polynucleotide phosphorylase/polyadenylase 948815..950926 Macrococcus caseolyticus JCSC5402 7389508 YP_002560268.1 CDS MCCL_0865 NC_011999.1 950987 952177 D similar to zinc protease; hypothetical protein 950987..952177 Macrococcus caseolyticus JCSC5402 7389824 YP_002560269.1 CDS MCCL_0866 NC_011999.1 952620 954293 D similar to functionally unknown protein; hypothetical protein 952620..954293 Macrococcus caseolyticus JCSC5402 7390293 YP_002560270.1 CDS ftsK NC_011999.1 954353 956593 D DNA translocase FtsK 954353..956593 Macrococcus caseolyticus JCSC5402 7390294 YP_002560271.1 CDS MCCL_0868 NC_011999.1 956605 957318 D similar to transcriptional regulator; hypothetical protein 956605..957318 Macrococcus caseolyticus JCSC5402 7390578 YP_002560272.1 CDS MCCL_0869 NC_011999.1 957327 958559 D similar to functionally unknown protein; hypothetical protein 957327..958559 Macrococcus caseolyticus JCSC5402 7390295 YP_002560273.1 CDS MCCL_0870 NC_011999.1 958559 959827 D similar to zinc protease; hypothetical protein 958559..959827 Macrococcus caseolyticus JCSC5402 7390296 YP_002560274.1 CDS MCCL_0871 NC_011999.1 959820 960527 D similar to short chain dehydrogenase; hypothetical protein 959820..960527 Macrococcus caseolyticus JCSC5402 7390297 YP_002560275.1 CDS MCCL_0872 NC_011999.1 960538 961329 D similar to functionally unknown protein; hypothetical protein 960538..961329 Macrococcus caseolyticus JCSC5402 7390298 YP_002560276.1 CDS MCCL_0873 NC_011999.1 961345 962166 D similar to transcriptional regulator; hypothetical protein 961345..962166 Macrococcus caseolyticus JCSC5402 7390299 YP_002560277.1 CDS MCCL_0874 NC_011999.1 962183 962764 D phosphatidylglycerophosphate synthase 962183..962764 Macrococcus caseolyticus JCSC5402 7390300 YP_002560278.1 CDS recA NC_011999.1 963041 964102 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of ous single-stranded DNAs; recombinase A 963041..964102 Macrococcus caseolyticus JCSC5402 7390301 YP_002560279.1 CDS MCCL_0876 NC_011999.1 964429 965988 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 964429..965988 Macrococcus caseolyticus JCSC5402 7389876 YP_002560280.1 CDS MCCL_0877 NC_011999.1 966343 967137 D similar to functionally unknown protein; hypothetical protein 966343..967137 Macrococcus caseolyticus JCSC5402 7390302 YP_002560281.1 CDS porA NC_011999.1 967242 968975 D 2-oxoacid ferredoxin oxidoreductase alpha subunit 967242..968975 Macrococcus caseolyticus JCSC5402 7390303 YP_002560282.1 CDS porB NC_011999.1 968976 969839 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 968976..969839 Macrococcus caseolyticus JCSC5402 7389827 YP_002560283.1 CDS MCCL_0880 NC_011999.1 970036 971037 D pyrimidine precursor biosynthesis enzyme 970036..971037 Macrococcus caseolyticus JCSC5402 7389828 YP_002560284.1 CDS MCCL_0881 NC_011999.1 971321 972058 D similar to hydroxymethylpyrimidine transporter permease; hypothetical protein 971321..972058 Macrococcus caseolyticus JCSC5402 7390304 YP_002560285.1 CDS MCCL_0882 NC_011999.1 972085 972765 D similar to hydroxymethylpyrimidine transport ATP-binding protein; hypothetical protein 972085..972765 Macrococcus caseolyticus JCSC5402 7390305 YP_002560286.1 CDS MCCL_0883 NC_011999.1 972815 973492 R DedA family protein complement(972815..973492) Macrococcus caseolyticus JCSC5402 7390306 YP_002560287.1 CDS MCCL_0884 NC_011999.1 973631 975349 D similar to ABC transporter ATP-binding protein; hypothetical protein 973631..975349 Macrococcus caseolyticus JCSC5402 7390307 YP_002560288.1 CDS MCCL_0885 NC_011999.1 975258 977192 D ABC transporter ATP-binding protein 975258..977192 Macrococcus caseolyticus JCSC5402 7390308 YP_002560289.1 CDS maiB NC_011999.1 977330 978859 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 977330..978859 Macrococcus caseolyticus JCSC5402 7390309 YP_002560290.1 CDS MCCL_0887 NC_011999.1 978862 979287 D similar to functionally unknown protein; hypothetical protein 978862..979287 Macrococcus caseolyticus JCSC5402 7390677 YP_002560291.1 CDS mutS NC_011999.1 979377 981917 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 979377..981917 Macrococcus caseolyticus JCSC5402 7390310 YP_002560292.1 CDS mutL NC_011999.1 981927 983828 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 981927..983828 Macrococcus caseolyticus JCSC5402 7390723 YP_002560293.1 CDS glpP NC_011999.1 983828 984370 D glycerol uptake operon antiterminator regulatory protein 983828..984370 Macrococcus caseolyticus JCSC5402 7390722 YP_002560294.1 CDS glpF NC_011999.1 984504 985322 D glycerol uptake facilitator 984504..985322 Macrococcus caseolyticus JCSC5402 7391099 YP_002560295.1 CDS glpK NC_011999.1 985341 986834 D glycerol kinase 985341..986834 Macrococcus caseolyticus JCSC5402 7391097 YP_002560296.1 CDS glpD NC_011999.1 986855 988528 D aerobic glycerol-3-phosphate dehydrogenase 986855..988528 Macrococcus caseolyticus JCSC5402 7391098 YP_002560297.1 CDS MCCL_0894 NC_011999.1 988657 989553 D similar to hydrolase; hypothetical protein 988657..989553 Macrococcus caseolyticus JCSC5402 7391096 YP_002560298.1 CDS miaA NC_011999.1 989546 990484 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 989546..990484 Macrococcus caseolyticus JCSC5402 7390311 YP_002560299.1 CDS bsaA NC_011999.1 990710 991183 R glutathione peroxidase complement(990710..991183) Macrococcus caseolyticus JCSC5402 7390686 YP_002560300.1 CDS MCCL_0897 NC_011999.1 991242 992519 D similar to functionally unknown protein; hypothetical protein 991242..992519 Macrococcus caseolyticus JCSC5402 7390207 YP_002560301.1 CDS MCCL_0898 NC_011999.1 992524 993783 D similar to functionally unknown protein; hypothetical protein 992524..993783 Macrococcus caseolyticus JCSC5402 7390312 YP_002560302.1 CDS glnR NC_011999.1 993894 994223 D glutamine synthetase repressor 993894..994223 Macrococcus caseolyticus JCSC5402 7390313 YP_002560303.1 CDS glnA NC_011999.1 994240 995577 D glutamine-ammonia ligase 994240..995577 Macrococcus caseolyticus JCSC5402 7391095 YP_002560304.1 CDS int NC_011999.1 995686 996810 R integrase complement(995686..996810) Macrococcus caseolyticus JCSC5402 7391094 YP_002560305.1 CDS MCCL_0902 NC_011999.1 996937 997887 R no similarity; hypothetical protein complement(996937..997887) Macrococcus caseolyticus JCSC5402 7391147 YP_002560306.1 CDS MCCL_0903 NC_011999.1 997989 998426 R no similarity; hypothetical protein complement(997989..998426) Macrococcus caseolyticus JCSC5402 7390314 YP_002560307.1 CDS MCCL_0904 NC_011999.1 998451 999479 R no similarity; hypothetical protein complement(998451..999479) Macrococcus caseolyticus JCSC5402 7390315 YP_002560308.1 CDS MCCL_0905 NC_011999.1 999506 999991 R similar to phage-related protein; hypothetical protein complement(999506..999991) Macrococcus caseolyticus JCSC5402 7390316 YP_002560309.1 CDS MCCL_0906 NC_011999.1 1000004 1000339 R Cro/CI family transcriptional regulator complement(1000004..1000339) Macrococcus caseolyticus JCSC5402 7390317 YP_002560310.1 CDS MCCL_0907 NC_011999.1 1000776 1001495 D anti-repressor 1000776..1001495 Macrococcus caseolyticus JCSC5402 7390318 YP_002560311.1 CDS MCCL_0908 NC_011999.1 1003860 1004114 D no similarity; hypothetical protein 1003860..1004114 Macrococcus caseolyticus JCSC5402 7390319 YP_002560312.1 CDS MCCL_0909 NC_011999.1 1004322 1005254 D no similarity; hypothetical protein 1004322..1005254 Macrococcus caseolyticus JCSC5402 7390320 YP_002560313.1 CDS MCCL_0910 NC_011999.1 1005226 1006026 D similar to functionally unknown protein; hypothetical protein 1005226..1006026 Macrococcus caseolyticus JCSC5402 7390321 YP_002560314.1 CDS MCCL_0911 NC_011999.1 1006045 1006371 D no similarity; hypothetical protein 1006045..1006371 Macrococcus caseolyticus JCSC5402 7390322 YP_002560315.1 CDS MCCL_0912 NC_011999.1 1006364 1006822 D similar to ssDNA binding protein; hypothetical protein 1006364..1006822 Macrococcus caseolyticus JCSC5402 7390323 YP_002560316.1 CDS MCCL_0913 NC_011999.1 1006851 1007741 D similar to phage regulatory protein; hypothetical protein 1006851..1007741 Macrococcus caseolyticus JCSC5402 7390324 YP_002560317.1 CDS MCCL_0914 NC_011999.1 1007999 1008364 D similar to functionally unknown protein; hypothetical protein 1007999..1008364 Macrococcus caseolyticus JCSC5402 7390325 YP_002560318.1 CDS MCCL_0915 NC_011999.1 1008544 1009062 D similar to functionally unknown protein; hypothetical protein 1008544..1009062 Macrococcus caseolyticus JCSC5402 7390326 YP_002560319.1 CDS MCCL_0916 NC_011999.1 1009304 1009729 D similar to functionally unknown protein; hypothetical protein 1009304..1009729 Macrococcus caseolyticus JCSC5402 7390327 YP_002560320.1 CDS MCCL_0917 NC_011999.1 1009775 1010677 D no similarity; hypothetical protein 1009775..1010677 Macrococcus caseolyticus JCSC5402 7390328 YP_002560321.1 CDS MCCL_0918 NC_011999.1 1010746 1011306 D similar to phage RNA polymerase sigma factor-like protein; hypothetical protein 1010746..1011306 Macrococcus caseolyticus JCSC5402 7390329 YP_002560322.1 CDS MCCL_0919 NC_011999.1 1011452 1011718 D no similarity; hypothetical protein 1011452..1011718 Macrococcus caseolyticus JCSC5402 7390330 YP_002560323.1 CDS MCCL_0920 NC_011999.1 1012120 1012560 D similar to ORF027 of bacteriophage 96; hypothetical protein 1012120..1012560 Macrococcus caseolyticus JCSC5402 7390331 YP_002560324.1 CDS MCCL_0921 NC_011999.1 1012553 1013803 D ORF009 of bacteriophage 96; hypothetical protein 1012553..1013803 Macrococcus caseolyticus JCSC5402 7390332 YP_002560325.1 CDS MCCL_0922 NC_011999.1 1013816 1015252 D ORF003 of bacteriophage 187; hypothetical protein 1013816..1015252 Macrococcus caseolyticus JCSC5402 7390333 YP_002560326.1 CDS MCCL_0923 NC_011999.1 1015302 1017017 D no similarity; hypothetical protein 1015302..1017017 Macrococcus caseolyticus JCSC5402 7390334 YP_002560327.1 CDS MCCL_0924 NC_011999.1 1017069 1017431 D no similarity; hypothetical protein 1017069..1017431 Macrococcus caseolyticus JCSC5402 7390335 YP_002560328.1 CDS MCCL_0925 NC_011999.1 1017515 1018180 D similar to ORF021 of bacteriophage 187; hypothetical protein 1017515..1018180 Macrococcus caseolyticus JCSC5402 7390336 YP_002560329.1 CDS MCCL_0926 NC_011999.1 1018196 1019107 D ORF011 of Bacteriophage 187; hypothetical protein 1018196..1019107 Macrococcus caseolyticus JCSC5402 7390337 YP_002560330.1 CDS MCCL_0927 NC_011999.1 1019403 1019726 D similar to phage-related protein; hypothetical protein 1019403..1019726 Macrococcus caseolyticus JCSC5402 7390338 YP_002560331.1 CDS MCCL_0928 NC_011999.1 1020022 1020366 D similar to phage-related protein; hypothetical protein 1020022..1020366 Macrococcus caseolyticus JCSC5402 7390339 YP_002560332.1 CDS MCCL_0929 NC_011999.1 1020371 1020754 D similar to phage-related protein; hypothetical protein 1020371..1020754 Macrococcus caseolyticus JCSC5402 7390340 YP_002560333.1 CDS MCCL_0930 NC_011999.1 1020766 1021320 D similar to phage-related protein; hypothetical protein 1020766..1021320 Macrococcus caseolyticus JCSC5402 7390341 YP_002560334.1 CDS MCCL_0931 NC_011999.1 1021386 1021763 D similar to ORF043 of bacteriophage 187; hypothetical protein 1021386..1021763 Macrococcus caseolyticus JCSC5402 7390342 YP_002560335.1 CDS MCCL_0932 NC_011999.1 1021781 1022128 D similar to phage-related protein; hypothetical protein 1021781..1022128 Macrococcus caseolyticus JCSC5402 7390343 YP_002560336.1 CDS MCCL_0933 NC_011999.1 1022143 1025400 D similar to ORF001 of bacteriophage 187; hypothetical protein 1022143..1025400 Macrococcus caseolyticus JCSC5402 7390344 YP_002560337.1 CDS MCCL_0934 NC_011999.1 1027540 1029714 D no similarity; hypothetical protein 1027540..1029714 Macrococcus caseolyticus JCSC5402 7390345 YP_002560338.1 CDS MCCL_0935 NC_011999.1 1029581 1030345 D no similarity; hypothetical protein 1029581..1030345 Macrococcus caseolyticus JCSC5402 7390346 YP_002560339.1 CDS MCCL_0936 NC_011999.1 1030840 1031352 D similar to holin; hypothetical protein 1030840..1031352 Macrococcus caseolyticus JCSC5402 7390347 YP_002560340.1 CDS MCCL_0937 NC_011999.1 1031369 1032268 D similar to phage amidase; hypothetical protein 1031369..1032268 Macrococcus caseolyticus JCSC5402 7390348 YP_002560341.1 CDS int NC_011999.1 1032926 1034080 R integrase complement(1032926..1034080) Macrococcus caseolyticus JCSC5402 7390349 YP_002560342.1 CDS MCCL_0939 NC_011999.1 1034085 1034546 R similar to phage-related protein; hypothetical protein complement(1034085..1034546) Macrococcus caseolyticus JCSC5402 7391148 YP_002560343.1 CDS MCCL_0940 NC_011999.1 1034884 1035747 R similar to ORF013 of bacteriophage 53; hypothetical protein complement(1034884..1035747) Macrococcus caseolyticus JCSC5402 7390350 YP_002560344.1 CDS MCCL_0941 NC_011999.1 1035810 1036889 R no similarity; hypothetical protein complement(1035810..1036889) Macrococcus caseolyticus JCSC5402 7390351 YP_002560345.1 CDS MCCL_0942 NC_011999.1 1036902 1037975 R similar to phage-related protein; hypothetical protein complement(1036902..1037975) Macrococcus caseolyticus JCSC5402 7390352 YP_002560346.1 CDS MCCL_0943 NC_011999.1 1038864 1039367 D similar to phage-related protein; hypothetical protein 1038864..1039367 Macrococcus caseolyticus JCSC5402 7390353 YP_002560347.1 CDS MCCL_0944 NC_011999.1 1039369 1039938 D no similarity; hypothetical protein 1039369..1039938 Macrococcus caseolyticus JCSC5402 7390354 YP_002560348.1 CDS MCCL_0945 NC_011999.1 1040837 1041607 D similar to phage-related DNA binding protein; hypothetical protein 1040837..1041607 Macrococcus caseolyticus JCSC5402 7390355 YP_002560349.1 CDS MCCL_0946 NC_011999.1 1041997 1042938 D similar to phage-related protein; hypothetical protein 1041997..1042938 Macrococcus caseolyticus JCSC5402 7390356 YP_002560350.1 CDS recT NC_011999.1 1042944 1043774 D similar to phage-related DNA binding protein; recombination and repair protein RecT 1042944..1043774 Macrococcus caseolyticus JCSC5402 7390357 YP_002560351.1 CDS MCCL_0948 NC_011999.1 1043806 1044396 D similar to phage-related protein; hypothetical protein 1043806..1044396 Macrococcus caseolyticus JCSC5402 7390358 YP_002560352.1 CDS MCCL_0949 NC_011999.1 1044335 1044697 D no similarity; hypothetical protein 1044335..1044697 Macrococcus caseolyticus JCSC5402 7390359 YP_002560353.1 CDS MCCL_0950 NC_011999.1 1044666 1045460 D similar to ORF014 of bacteriophage 187; hypothetical protein 1044666..1045460 Macrococcus caseolyticus JCSC5402 7390360 YP_002560354.1 CDS MCCL_0951 NC_011999.1 1045477 1045809 D no similarity; hypothetical protein 1045477..1045809 Macrococcus caseolyticus JCSC5402 7390361 YP_002560355.1 CDS MCCL_0952 NC_011999.1 1046123 1046632 D single-strand DNA-binding protein 1046123..1046632 Macrococcus caseolyticus JCSC5402 7390362 YP_002560356.1 CDS MCCL_0953 NC_011999.1 1047599 1048111 D no similarity; hypothetical protein 1047599..1048111 Macrococcus caseolyticus JCSC5402 7390363 YP_002560357.1 CDS MCCL_0954 NC_011999.1 1048114 1048629 D no similarity; hypothetical protein 1048114..1048629 Macrococcus caseolyticus JCSC5402 7390364 YP_002560358.1 CDS MCCL_0955 NC_011999.1 1051005 1051373 D no similarity; hypothetical protein 1051005..1051373 Macrococcus caseolyticus JCSC5402 7390365 YP_002560359.1 CDS MCCL_0956 NC_011999.1 1051544 1051846 D ORF17 of Staphylococcus phage K; hypothetical protein 1051544..1051846 Macrococcus caseolyticus JCSC5402 7390366 YP_002560360.1 CDS MCCL_0957 NC_011999.1 1052549 1052953 D similar to functionally unknown protein; hypothetical protein 1052549..1052953 Macrococcus caseolyticus JCSC5402 7390367 YP_002560361.1 CDS MCCL_0958 NC_011999.1 1053020 1053892 D no similarity; hypothetical protein 1053020..1053892 Macrococcus caseolyticus JCSC5402 7390368 YP_002560362.1 CDS MCCL_0959 NC_011999.1 1054489 1055202 D similar to phage-related DNA binding protein; hypothetical protein 1054489..1055202 Macrococcus caseolyticus JCSC5402 7390369 YP_002560363.1 CDS MCCL_0960 NC_011999.1 1055199 1056491 D terminase, large subunit 1055199..1056491 Macrococcus caseolyticus JCSC5402 7390370 YP_002560364.1 CDS MCCL_0961 NC_011999.1 1056504 1058123 D similar to functionally unknown protein; hypothetical protein 1056504..1058123 Macrococcus caseolyticus JCSC5402 7390371 YP_002560365.1 CDS MCCL_0962 NC_011999.1 1058128 1059216 D similar to functionally unknown protein; hypothetical protein 1058128..1059216 Macrococcus caseolyticus JCSC5402 7390372 YP_002560366.1 CDS MCCL_0963 NC_011999.1 1059182 1059502 D similar to phage-related protein; hypothetical protein 1059182..1059502 Macrococcus caseolyticus JCSC5402 7390915 YP_002560367.1 CDS MCCL_0964 NC_011999.1 1060007 1060612 D similar to minor capsid protein; hypothetical protein 1060007..1060612 Macrococcus caseolyticus JCSC5402 7390916 YP_002560368.1 CDS MCCL_0965 NC_011999.1 1060626 1061000 D no similarity; hypothetical protein 1060626..1061000 Macrococcus caseolyticus JCSC5402 7390917 YP_002560369.1 CDS MCCL_0966 NC_011999.1 1061027 1062031 D no similarity; hypothetical protein 1061027..1062031 Macrococcus caseolyticus JCSC5402 7390918 YP_002560370.1 CDS MCCL_0967 NC_011999.1 1062366 1062749 D similar to functionally unknown protein; hypothetical protein 1062366..1062749 Macrococcus caseolyticus JCSC5402 7390919 YP_002560371.1 CDS MCCL_0968 NC_011999.1 1062749 1063093 D similar to functionally unknown protein; hypothetical protein 1062749..1063093 Macrococcus caseolyticus JCSC5402 7390920 YP_002560372.1 CDS MCCL_0969 NC_011999.1 1062993 1063565 D similar to functionally unknown protein; hypothetical protein 1062993..1063565 Macrococcus caseolyticus JCSC5402 7390921 YP_002560373.1 CDS MCCL_0970 NC_011999.1 1063570 1063950 D similar to functionally unknown protein; hypothetical protein 1063570..1063950 Macrococcus caseolyticus JCSC5402 7390922 YP_002560374.1 CDS MCCL_0971 NC_011999.1 1064014 1064592 D similar to functionally unknown protein; hypothetical protein 1064014..1064592 Macrococcus caseolyticus JCSC5402 7390923 YP_002560375.1 CDS MCCL_0972 NC_011999.1 1064668 1065189 D similar to functionally unknown protein; hypothetical protein 1064668..1065189 Macrococcus caseolyticus JCSC5402 7390924 YP_002560376.1 CDS MCCL_0973 NC_011999.1 1065144 1065527 D no similarity; hypothetical protein 1065144..1065527 Macrococcus caseolyticus JCSC5402 7390925 YP_002560377.1 CDS MCCL_0974 NC_011999.1 1065567 1068200 D no similarity; hypothetical protein 1065567..1068200 Macrococcus caseolyticus JCSC5402 7390926 YP_002560378.1 CDS MCCL_0975 NC_011999.1 1068201 1071413 D no similarity; hypothetical protein 1068201..1071413 Macrococcus caseolyticus JCSC5402 7390927 YP_002560379.1 CDS MCCL_0976 NC_011999.1 1071403 1071837 D no similarity; hypothetical protein 1071403..1071837 Macrococcus caseolyticus JCSC5402 7390928 YP_002560380.1 CDS MCCL_0977 NC_011999.1 1071837 1075232 D similar to ORF002 of bacteriophage 2638A; hypothetical protein 1071837..1075232 Macrococcus caseolyticus JCSC5402 7390929 YP_002560381.1 CDS MCCL_0978 NC_011999.1 1075729 1076241 D holin 1075729..1076241 Macrococcus caseolyticus JCSC5402 7390930 YP_002560382.1 CDS MCCL_0979 NC_011999.1 1076347 1077309 D no similarity; hypothetical protein 1076347..1077309 Macrococcus caseolyticus JCSC5402 7390931 YP_002560383.1 CDS MCCL_0980 NC_011999.1 1077655 1078560 D no similarity; hypothetical protein 1077655..1078560 Macrococcus caseolyticus JCSC5402 7390932 YP_002560384.1 CDS MCCL_0981 NC_011999.1 1078895 1080259 D similar to ABC transporter ATP-binding protein; hypothetical protein 1078895..1080259 Macrococcus caseolyticus JCSC5402 7390933 YP_002560385.1 CDS MCCL_0982 NC_011999.1 1080252 1080857 D no similarity; hypothetical protein 1080252..1080857 Macrococcus caseolyticus JCSC5402 7390934 YP_002560386.1 CDS MCCL_0983 NC_011999.1 1081477 1081908 R similar to functionally unknown protein; hypothetical protein complement(1081477..1081908) Macrococcus caseolyticus JCSC5402 7390935 YP_002560387.1 CDS thrA NC_011999.1 1083667 1085013 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase complement(1083667..1085013) Macrococcus caseolyticus JCSC5402 7390936 YP_002560388.1 CDS MCCL_0985 NC_011999.1 1085147 1086361 D homoserine dehydrogenase 1085147..1086361 Macrococcus caseolyticus JCSC5402 7390469 YP_002560389.1 CDS thrC NC_011999.1 1086348 1087424 D threonine synthase 1086348..1087424 Macrococcus caseolyticus JCSC5402 7390937 YP_002560390.1 CDS MCCL_0987 NC_011999.1 1087424 1088326 D similar to homoserine kinase; hypothetical protein 1087424..1088326 Macrococcus caseolyticus JCSC5402 7390470 YP_002560391.1 CDS MCCL_0988 NC_011999.1 1088353 1089162 D similar to functionally unknown protein; hypothetical protein 1088353..1089162 Macrococcus caseolyticus JCSC5402 7390938 YP_002560392.1 CDS MCCL_0989 NC_011999.1 1089302 1089619 R similar to functionally unknown protein; hypothetical protein complement(1089302..1089619) Macrococcus caseolyticus JCSC5402 7390939 YP_002560393.1 CDS MCCL_0990 NC_011999.1 1089682 1091121 R gamma-aminobutyrate permease complement(1089682..1091121) Macrococcus caseolyticus JCSC5402 7390940 YP_002560394.1 CDS MCCL_0991 NC_011999.1 1091476 1092669 R Low-affinity zinc transport protein complement(1091476..1092669) Macrococcus caseolyticus JCSC5402 7390941 YP_002560395.1 CDS MCCL_0992 NC_011999.1 1092850 1093797 D similar to Mn2+Zn2+ ABC transporter periplasmic substrate-binding protein; hypothetical protein 1092850..1093797 Macrococcus caseolyticus JCSC5402 7390942 YP_002560396.1 CDS MCCL_0993 NC_011999.1 1094200 1094613 D no similarity; hypothetical protein 1094200..1094613 Macrococcus caseolyticus JCSC5402 7390943 YP_002560397.1 CDS MCCL_0994 NC_011999.1 1094622 1095002 D similar to glyoxalase; hypothetical protein 1094622..1095002 Macrococcus caseolyticus JCSC5402 7390944 YP_002560398.1 CDS lexA NC_011999.1 1096207 1096827 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1096207..1096827) Macrococcus caseolyticus JCSC5402 7390945 YP_002560399.1 CDS MCCL_0996 NC_011999.1 1097280 1097516 D similar to functionally unknown protein; hypothetical protein 1097280..1097516 Macrococcus caseolyticus JCSC5402 7391158 YP_002560400.1 CDS tkt NC_011999.1 1097540 1099525 D transketolase 1097540..1099525 Macrococcus caseolyticus JCSC5402 7390946 YP_002560401.1 CDS MCCL_0998 NC_011999.1 1099941 1100474 R no similarity; hypothetical protein complement(1099941..1100474) Macrococcus caseolyticus JCSC5402 7390473 YP_002560402.1 CDS MCCL_0999 NC_011999.1 1100627 1101301 D holocytochrome C synthase 1100627..1101301 Macrococcus caseolyticus JCSC5402 7390947 YP_002560403.1 CDS MCCL_1000 NC_011999.1 1101316 1101792 D similar to functionally unknown protein; hypothetical protein 1101316..1101792 Macrococcus caseolyticus JCSC5402 7390948 YP_002560404.1 CDS MCCL_1001 NC_011999.1 1101803 1102288 R similar to functionally unknown protein; hypothetical protein complement(1101803..1102288) Macrococcus caseolyticus JCSC5402 7390949 YP_002560405.1 CDS MCCL_1002 NC_011999.1 1102903 1104021 D similar to exonuclease SbcD; hypothetical protein 1102903..1104021 Macrococcus caseolyticus JCSC5402 7390950 YP_002560406.1 CDS MCCL_1003 NC_011999.1 1104008 1107037 D similar to exonuclease SbcC; hypothetical protein 1104008..1107037 Macrococcus caseolyticus JCSC5402 7390951 YP_002560409.1 CDS mscL NC_011999.1 1107784 1108152 R forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(1107784..1108152) Macrococcus caseolyticus JCSC5402 7390952 YP_002560410.1 CDS opuD NC_011999.1 1108341 1109891 D glycine/betaine ABC transporter 1108341..1109891 Macrococcus caseolyticus JCSC5402 7390953 YP_002560411.1 CDS citB NC_011999.1 1110068 1112776 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1110068..1112776 Macrococcus caseolyticus JCSC5402 7390750 YP_002560412.1 CDS MCCL_1009 NC_011999.1 1112862 1113290 D similar to functionally unknown protein; hypothetical protein 1112862..1113290 Macrococcus caseolyticus JCSC5402 7390514 YP_002560413.1 CDS MCCL_1010 NC_011999.1 1113402 1113986 R similar to functionally unknown protein; hypothetical protein complement(1113402..1113986) Macrococcus caseolyticus JCSC5402 7390954 YP_002560414.1 CDS grlB NC_011999.1 1114205 1116220 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1114205..1116220 Macrococcus caseolyticus JCSC5402 7390955 YP_002560415.1 CDS grlA NC_011999.1 1116213 1118624 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1116213..1118624 Macrococcus caseolyticus JCSC5402 7391108 YP_002560416.1 CDS MCCL_1013 NC_011999.1 1118704 1120191 D Na+/alanine symporter family protein 1118704..1120191 Macrococcus caseolyticus JCSC5402 7391107 YP_002560417.1 CDS MCCL_1014 NC_011999.1 1120223 1121194 R similar to functionally unknown protein; hypothetical protein complement(1120223..1121194) Macrococcus caseolyticus JCSC5402 7390956 YP_002560418.1 CDS MCCL_1015 NC_011999.1 1121293 1122144 D similar to transcription antiterminator; hypothetical protein 1121293..1122144 Macrococcus caseolyticus JCSC5402 7390957 YP_002560419.1 CDS glcB NC_011999.1 1122259 1124340 D glucose-specific PTS system IIABC component 1122259..1124340 Macrococcus caseolyticus JCSC5402 7390958 YP_002560420.1 CDS MCCL_1017 NC_011999.1 1124486 1125628 D similar to functionally unknown protein; hypothetical protein 1124486..1125628 Macrococcus caseolyticus JCSC5402 7391088 YP_002560421.1 CDS MCCL_1018 NC_011999.1 1125760 1128294 D similar to oxacillin resistance-related FmtC protein; hypothetical protein 1125760..1128294 Macrococcus caseolyticus JCSC5402 7390959 YP_002560422.1 CDS msrA1 NC_011999.1 1128291 1128794 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1128291..1128794) Macrococcus caseolyticus JCSC5402 7390960 YP_002560423.1 CDS msrR NC_011999.1 1128916 1129857 D peptide methionine sulfoxide reductase regulator MsrR 1128916..1129857 Macrococcus caseolyticus JCSC5402 7390712 YP_002560424.1 CDS MCCL_1021 NC_011999.1 1130123 1131127 R cation efflux protein complement(1130123..1131127) Macrococcus caseolyticus JCSC5402 7390714 YP_002560425.1 CDS MCCL_1022 NC_011999.1 1131205 1131675 D similar to functionally unknown protein; hypothetical protein 1131205..1131675 Macrococcus caseolyticus JCSC5402 7390961 YP_002560426.1 CDS MCCL_1023 NC_011999.1 1131776 1132264 R similar to GCN5-related N-acetyltransferase; hypothetical protein complement(1131776..1132264) Macrococcus caseolyticus JCSC5402 7390962 YP_002560427.1 CDS MCCL_1024 NC_011999.1 1132308 1133048 D similar to functionally unknown protein; hypothetical protein 1132308..1133048 Macrococcus caseolyticus JCSC5402 7390963 YP_002560428.1 CDS MCCL_1025 NC_011999.1 1133058 1133948 D similar to functionally unknown protein; hypothetical protein 1133058..1133948 Macrococcus caseolyticus JCSC5402 7390964 YP_002560429.1 CDS MCCL_1026 NC_011999.1 1133980 1134465 D similar to mutator MutT protein; hypothetical protein 1133980..1134465 Macrococcus caseolyticus JCSC5402 7390965 YP_002560430.1 CDS MCCL_1027 NC_011999.1 1134480 1135229 D similar to functionally unknown protein; hypothetical protein 1134480..1135229 Macrococcus caseolyticus JCSC5402 7390966 YP_002560431.1 CDS MCCL_1028 NC_011999.1 1135321 1135731 D similar to functionally unknown protein; hypothetical protein 1135321..1135731 Macrococcus caseolyticus JCSC5402 7390967 YP_002560432.1 CDS MCCL_1029 NC_011999.1 1135827 1136195 D similar to functionally unknown protein; hypothetical protein 1135827..1136195 Macrococcus caseolyticus JCSC5402 7390968 YP_002560433.1 CDS MCCL_1030 NC_011999.1 1136195 1137295 D no similarity; hypothetical protein 1136195..1137295 Macrococcus caseolyticus JCSC5402 7390969 YP_002560434.1 CDS MCCL_1031 NC_011999.1 1137378 1137914 D similar to GNAT family acetyltransferase; hypothetical protein 1137378..1137914 Macrococcus caseolyticus JCSC5402 7390970 YP_002560435.1 CDS MCCL_1032 NC_011999.1 1138038 1138349 D similar to 6'-N-acetyltransferase; hypothetical protein 1138038..1138349 Macrococcus caseolyticus JCSC5402 7390971 YP_002560436.1 CDS MCCL_1033 NC_011999.1 1138539 1139852 D DNA-damage repair protein 1138539..1139852 Macrococcus caseolyticus JCSC5402 7390972 YP_002560437.1 CDS MCCL_1034 NC_011999.1 1140420 1141940 D similar to ABC transporter ATP-binding protein; hypothetical protein 1140420..1141940 Macrococcus caseolyticus JCSC5402 7390973 YP_002560438.1 CDS MCCL_1035 NC_011999.1 1141986 1143590 R similar to ABC transporter substrate-binding protein; hypothetical protein complement(1141986..1143590) Macrococcus caseolyticus JCSC5402 7390974 YP_002560439.1 CDS MCCL_1036 NC_011999.1 1143678 1144898 D similar to permease; hypothetical protein 1143678..1144898 Macrococcus caseolyticus JCSC5402 7390975 YP_002560440.1 CDS yhfE NC_011999.1 1145062 1146102 D glucanase/deblocking aminopeptidase 1145062..1146102 Macrococcus caseolyticus JCSC5402 7390976 YP_002560441.1 CDS MCCL_1038 NC_011999.1 1146172 1146828 D similar to intracellular protease/amidase; hypothetical protein 1146172..1146828 Macrococcus caseolyticus JCSC5402 7390504 YP_002560442.1 CDS MCCL_1039 NC_011999.1 1146865 1147230 R no similarity; hypothetical protein complement(1146865..1147230) Macrococcus caseolyticus JCSC5402 7390977 YP_002560443.1 CDS MCCL_1040 NC_011999.1 1147221 1147892 R no similarity; hypothetical protein complement(1147221..1147892) Macrococcus caseolyticus JCSC5402 7390978 YP_002560444.1 CDS femA NC_011999.1 1148103 1149344 D methicillin resistance protein FemA 1148103..1149344 Macrococcus caseolyticus JCSC5402 7390979 YP_002560445.1 CDS femB NC_011999.1 1149366 1150640 D methicillin resistance protein FemB 1149366..1150640 Macrococcus caseolyticus JCSC5402 7390567 YP_002560446.1 CDS MCCL_1043 NC_011999.1 1150739 1151122 R similar to functionally unknown protein; hypothetical protein complement(1150739..1151122) Macrococcus caseolyticus JCSC5402 7390568 YP_002560447.1 CDS MCCL_1044 NC_011999.1 1151276 1153075 D similar to oligoendopeptidase; hypothetical protein 1151276..1153075 Macrococcus caseolyticus JCSC5402 7390980 YP_002560448.1 CDS MCCL_1045 NC_011999.1 1153093 1153794 D similar to short-chain dehydrogenase/reductase SDR; hypothetical protein 1153093..1153794 Macrococcus caseolyticus JCSC5402 7390981 YP_002560449.1 CDS MCCL_1046 NC_011999.1 1153820 1154686 R similar to functionally unknown protein; hypothetical protein complement(1153820..1154686) Macrococcus caseolyticus JCSC5402 7390982 YP_002560450.1 CDS MCCL_1047 NC_011999.1 1154861 1156462 D ABC transporter ATP-binding protein 1154861..1156462 Macrococcus caseolyticus JCSC5402 7390983 YP_002560451.1 CDS lysC NC_011999.1 1156770 1157993 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1156770..1157993 Macrococcus caseolyticus JCSC5402 7390984 YP_002560452.1 CDS asd NC_011999.1 1158012 1159001 D aspartate semialdehyde dehydrogenase 1158012..1159001 Macrococcus caseolyticus JCSC5402 7390673 YP_002560453.1 CDS dapA NC_011999.1 1159019 1159909 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1159019..1159909 Macrococcus caseolyticus JCSC5402 7390197 YP_002560454.1 CDS dapB NC_011999.1 1159906 1160628 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1159906..1160628 Macrococcus caseolyticus JCSC5402 7390536 YP_002560455.1 CDS dapD NC_011999.1 1160644 1161360 D tetrahydrodipicolinate acetyltransferase 1160644..1161360 Macrococcus caseolyticus JCSC5402 7390537 YP_002560456.1 CDS MCCL_1053 NC_011999.1 1161415 1162560 D hippurate hydrolase 1161415..1162560 Macrococcus caseolyticus JCSC5402 7390538 YP_002560457.1 CDS alr2 NC_011999.1 1162557 1163639 D alanine racemase 2 1162557..1163639 Macrococcus caseolyticus JCSC5402 7390985 YP_002560458.1 CDS lysA NC_011999.1 1163620 1164891 D diaminopimelate decarboxylase 1163620..1164891 Macrococcus caseolyticus JCSC5402 7390182 YP_002560459.1 CDS MCCL_1056 NC_011999.1 1165456 1165755 R similar to functionally unknown protein; hypothetical protein complement(1165456..1165755) Macrococcus caseolyticus JCSC5402 7390672 YP_002560460.1 CDS MCCL_1057 NC_011999.1 1166167 1166874 D similar to 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC; hypothetical protein 1166167..1166874 Macrococcus caseolyticus JCSC5402 7390986 YP_002560461.1 CDS MCCL_1058 NC_011999.1 1166974 1168035 D toxic ion resistance protein 1166974..1168035 Macrococcus caseolyticus JCSC5402 7390987 YP_002560462.1 CDS MCCL_1059 NC_011999.1 1168048 1169376 R branched-chain amino acid carrier protein complement(1168048..1169376) Macrococcus caseolyticus JCSC5402 7390988 YP_002560463.1 CDS MCCL_1060 NC_011999.1 1169461 1171302 R similar to functionally unknown protein; hypothetical protein complement(1169461..1171302) Macrococcus caseolyticus JCSC5402 7390989 YP_002560464.1 CDS MCCL_1061 NC_011999.1 1171302 1172087 R CbbQ/NirQ/NorQ/GpvN family protein complement(1171302..1172087) Macrococcus caseolyticus JCSC5402 7390990 YP_002560465.1 CDS MCCL_1062 NC_011999.1 1172488 1173339 R similar to glyoxalase/bleomycin resistance protein; hypothetical protein complement(1172488..1173339) Macrococcus caseolyticus JCSC5402 7390991 YP_002560466.1 CDS odhB NC_011999.1 1173409 1174656 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(1173409..1174656) Macrococcus caseolyticus JCSC5402 7390992 YP_002560467.1 CDS sucA NC_011999.1 1174670 1177447 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(1174670..1177447) Macrococcus caseolyticus JCSC5402 7390741 YP_002560468.1 CDS MCCL_1065 NC_011999.1 1177541 1178911 R sensor histidine kinase ArlS complement(1177541..1178911) Macrococcus caseolyticus JCSC5402 7390993 YP_002560469.1 CDS MCCL_1066 NC_011999.1 1178908 1179579 R response regulator ArlR complement(1178908..1179579) Macrococcus caseolyticus JCSC5402 7390994 YP_002560470.1 CDS MCCL_1067 NC_011999.1 1179591 1180187 R similar to acetyltransferase, GNAT family; hypothetical protein complement(1179591..1180187) Macrococcus caseolyticus JCSC5402 7390995 YP_002560471.1 CDS MCCL_1068 NC_011999.1 1180385 1181008 R similar to functionally unknown protein; hypothetical protein complement(1180385..1181008) Macrococcus caseolyticus JCSC5402 7390996 YP_002560472.1 CDS murG NC_011999.1 1181020 1182081 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(1181020..1182081) Macrococcus caseolyticus JCSC5402 7389230 YP_002560473.1 CDS MCCL_1070 NC_011999.1 1182094 1183503 R similar to carboxypeptidase family protein; hypothetical protein complement(1182094..1183503) Macrococcus caseolyticus JCSC5402 7390720 YP_002560474.1 CDS MCCL_1071 NC_011999.1 1183864 1184364 R glucose-specific PTS system IIA component complement(1183864..1184364) Macrococcus caseolyticus JCSC5402 7389231 YP_002560475.1 CDS msrB NC_011999.1 1184379 1184834 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1184379..1184834) Macrococcus caseolyticus JCSC5402 7389232 YP_002560476.1 CDS msrA NC_011999.1 1184800 1185330 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1184800..1185330) Macrococcus caseolyticus JCSC5402 7390713 YP_002560477.1 CDS MCCL_1074 NC_011999.1 1185335 1185892 R similar to functionally unknown protein; hypothetical protein complement(1185335..1185892) Macrococcus caseolyticus JCSC5402 7390711 YP_002560478.1 CDS MCCL_1075 NC_011999.1 1185876 1186721 R similar to functionally unknown protein; hypothetical protein complement(1185876..1186721) Macrococcus caseolyticus JCSC5402 7389233 YP_002560479.1 CDS MCCL_1076 NC_011999.1 1186726 1187454 R similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase; hypothetical protein complement(1186726..1187454) Macrococcus caseolyticus JCSC5402 7389234 YP_002560480.1 CDS dfrB NC_011999.1 1187447 1187929 R dihydrofolate reductase complement(1187447..1187929) Macrococcus caseolyticus JCSC5402 7389235 YP_002560481.1 CDS thyA NC_011999.1 1187939 1188889 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1187939..1188889) Macrococcus caseolyticus JCSC5402 7390543 YP_002560482.1 CDS MCCL_1079 NC_011999.1 1189137 1189982 R no similarity; hypothetical protein complement(1189137..1189982) Macrococcus caseolyticus JCSC5402 7390472 YP_002560483.1 CDS MCCL_1080 NC_011999.1 1189915 1190349 R similar to functionally unknown protein; hypothetical protein complement(1189915..1190349) Macrococcus caseolyticus JCSC5402 7389236 YP_002560484.1 CDS MCCL_1081 NC_011999.1 1190346 1190714 R similar to functionally unknown protein; hypothetical protein complement(1190346..1190714) Macrococcus caseolyticus JCSC5402 7389237 YP_002560485.1 CDS MCCL_1082 NC_011999.1 1190746 1191468 R similar to functionally unknown protein; hypothetical protein complement(1190746..1191468) Macrococcus caseolyticus JCSC5402 7389238 YP_002560486.1 CDS MCCL_1083 NC_011999.1 1191787 1192467 D similar to functionally unknown protein; hypothetical protein 1191787..1192467 Macrococcus caseolyticus JCSC5402 7389239 YP_002560487.1 CDS MCCL_1084 NC_011999.1 1192467 1192856 D similar to functionally unknown protein; hypothetical protein 1192467..1192856 Macrococcus caseolyticus JCSC5402 7389240 YP_002560488.1 CDS MCCL_1085 NC_011999.1 1192858 1193628 R similar to functionally unknown protein; hypothetical protein complement(1192858..1193628) Macrococcus caseolyticus JCSC5402 7389241 YP_002560489.1 CDS MCCL_1086 NC_011999.1 1193628 1194581 R no similarity; hypothetical protein complement(1193628..1194581) Macrococcus caseolyticus JCSC5402 7389242 YP_002560490.1 CDS MCCL_1087 NC_011999.1 1194646 1195581 R similar to 5'-3' exonuclease; hypothetical protein complement(1194646..1195581) Macrococcus caseolyticus JCSC5402 7389243 YP_002560491.1 CDS MCCL_1088 NC_011999.1 1195520 1196359 R similar to thiosulfate sulfurtransferase; hypothetical protein complement(1195520..1196359) Macrococcus caseolyticus JCSC5402 7389244 YP_002560492.1 CDS MCCL_1089 NC_011999.1 1196356 1199754 R similar to functionally unknown protein; hypothetical protein complement(1196356..1199754) Macrococcus caseolyticus JCSC5402 7389245 YP_002560493.1 CDS MCCL_1090 NC_011999.1 1200066 1200542 D cytochrome c oxidase (b(o/a)3-type) chain II 1200066..1200542 Macrococcus caseolyticus JCSC5402 7389246 YP_002560494.1 CDS MCCL_1091 NC_011999.1 1200614 1202269 D cytochrome c oxidase (b(o/a)3-type) chain I 1200614..1202269 Macrococcus caseolyticus JCSC5402 7389247 YP_002560495.1 CDS MCCL_1092 NC_011999.1 1202303 1203313 R similar to monooxigenase; hypothetical protein complement(1202303..1203313) Macrococcus caseolyticus JCSC5402 7389248 YP_002560496.1 CDS MCCL_1093 NC_011999.1 1203427 1204545 R similar to methyltransferase; hypothetical protein complement(1203427..1204545) Macrococcus caseolyticus JCSC5402 7389249 YP_002560497.1 CDS MCCL_1094 NC_011999.1 1205090 1205404 R similar to functionally unknown protein; hypothetical protein complement(1205090..1205404) Macrococcus caseolyticus JCSC5402 7389250 YP_002560498.1 CDS MCCL_1095 NC_011999.1 1205415 1205966 R similar to functionally unknown protein; hypothetical protein complement(1205415..1205966) Macrococcus caseolyticus JCSC5402 7389251 YP_002560499.1 CDS MCCL_1096 NC_011999.1 1205963 1206298 R similar to functionally unknown protein; hypothetical protein complement(1205963..1206298) Macrococcus caseolyticus JCSC5402 7389252 YP_002560500.1 CDS recU NC_011999.1 1206376 1206981 D functions in ous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1206376..1206981 Macrococcus caseolyticus JCSC5402 7389253 YP_002560501.1 CDS pbpB NC_011999.1 1207003 1209339 D penicillin-binding protein 2 1207003..1209339 Macrococcus caseolyticus JCSC5402 7389254 YP_002560502.1 CDS MCCL_1099 NC_011999.1 1209413 1209724 R similar to functionally unknown protein; hypothetical protein complement(1209413..1209724) Macrococcus caseolyticus JCSC5402 7389802 YP_002560503.1 CDS MCCL_1100 NC_011999.1 1209721 1210374 R endonuclease III complement(1209721..1210374) Macrococcus caseolyticus JCSC5402 7389255 YP_002560504.1 CDS dnaD NC_011999.1 1210364 1211038 R chromosome replication initiation protein dnaD complement(1210364..1211038) Macrococcus caseolyticus JCSC5402 7389256 YP_002560505.1 CDS asnC NC_011999.1 1211164 1212459 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1211164..1212459) Macrococcus caseolyticus JCSC5402 7390550 YP_002560506.1 CDS MCCL_1103 NC_011999.1 1212533 1215085 R similar to ATP-dependent DNA helicase; hypothetical protein complement(1212533..1215085) Macrococcus caseolyticus JCSC5402 7390198 YP_002560507.1 CDS MCCL_1104 NC_011999.1 1215095 1216069 R similar to BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase]; hypothetical protein complement(1215095..1216069) Macrococcus caseolyticus JCSC5402 7389257 YP_002560508.1 CDS MCCL_1105 NC_011999.1 1216047 1217279 R similar to poly(A) polymerase; hypothetical protein complement(1216047..1217279) Macrococcus caseolyticus JCSC5402 7389258 YP_002560509.1 CDS MCCL_1106 NC_011999.1 1217276 1218409 R lipopolysaccharide biosynthesis-related pr-like protein complement(1217276..1218409) Macrococcus caseolyticus JCSC5402 7389259 YP_002560510.1 CDS MCCL_1107 NC_011999.1 1218424 1218741 R similar to pyrophosphatase; hypothetical protein complement(1218424..1218741) Macrococcus caseolyticus JCSC5402 7389260 YP_002560511.1 CDS MCCL_1108 NC_011999.1 1218800 1219672 D similar to functionally unknown protein; hypothetical protein 1218800..1219672 Macrococcus caseolyticus JCSC5402 7389261 YP_002560512.1 CDS MCCL_1109 NC_011999.1 1219723 1220421 R similar to functionally unknown protein; hypothetical protein complement(1219723..1220421) Macrococcus caseolyticus JCSC5402 7389262 YP_002560513.1 CDS MCCL_1110 NC_011999.1 1220468 1221046 R similar to functionally unknown protein; hypothetical protein complement(1220468..1221046) Macrococcus caseolyticus JCSC5402 7389263 YP_002560514.1 CDS qcrC NC_011999.1 1221100 1221888 R menaquinol-cytochrome c reductase cytochrome b/c subunit complement(1221100..1221888) Macrococcus caseolyticus JCSC5402 7389264 YP_002560515.1 CDS qcrB NC_011999.1 1221919 1222593 R electron transport protein; cytochrome b6 complement(1221919..1222593) Macrococcus caseolyticus JCSC5402 7389872 YP_002560516.1 CDS qcrA NC_011999.1 1222605 1223108 R menaquinol-cytochrome c oxidoreductase, iron-sulfur subunit complement(1222605..1223108) Macrococcus caseolyticus JCSC5402 7389871 YP_002560517.1 CDS MCCL_1114 NC_011999.1 1223228 1223653 R similar to functionally unknown protein; hypothetical protein complement(1223228..1223653) Macrococcus caseolyticus JCSC5402 7389870 YP_002560518.1 CDS MCCL_1115 NC_011999.1 1223656 1224102 R similar to functionally unknown protein; hypothetical protein complement(1223656..1224102) Macrococcus caseolyticus JCSC5402 7389265 YP_002560519.1 CDS MCCL_1116 NC_011999.1 1224170 1225384 R similar to functionally unknown protein; hypothetical protein complement(1224170..1225384) Macrococcus caseolyticus JCSC5402 7389266 YP_002560520.1 CDS aroA NC_011999.1 1225384 1226685 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1225384..1226685) Macrococcus caseolyticus JCSC5402 7389267 YP_002560521.1 CDS aroB NC_011999.1 1226682 1227755 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1226682..1227755) Macrococcus caseolyticus JCSC5402 7390190 YP_002560522.1 CDS aroC NC_011999.1 1227765 1228925 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1227765..1228925) Macrococcus caseolyticus JCSC5402 7390192 YP_002560523.1 CDS ndk NC_011999.1 1229044 1229490 R nucleoside-diphosphate kinase complement(1229044..1229490) Macrococcus caseolyticus JCSC5402 7390193 YP_002560524.1 CDS hepB2 NC_011999.1 1229562 1230539 R component B of hexaprenyl diphosphate synthase complement(1229562..1230539) Macrococcus caseolyticus JCSC5402 7390730 YP_002560525.1 CDS menG NC_011999.1 1230545 1231267 R 2-hexaprenyl-1,4-naphthoquinone methyltransferase complement(1230545..1231267) Macrococcus caseolyticus JCSC5402 7391123 YP_002560526.1 CDS hepB1 NC_011999.1 1231260 1231697 R component A of hexaprenyl diphosphate synthase complement(1231260..1231697) Macrococcus caseolyticus JCSC5402 7390681 YP_002560527.1 CDS MCCL_1124 NC_011999.1 1232177 1232890 R similar to functionally unknown protein; hypothetical protein complement(1232177..1232890) Macrococcus caseolyticus JCSC5402 7391122 YP_002560528.1 CDS glyC NC_011999.1 1233087 1234085 R NAD(P)+-dependent glycerol-3-phosphate dehydrogenase complement(1233087..1234085) Macrococcus caseolyticus JCSC5402 7389268 YP_002560529.1 CDS engA NC_011999.1 1234096 1235406 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1234096..1235406) Macrococcus caseolyticus JCSC5402 7391102 YP_002560530.1 CDS rpsA NC_011999.1 1235515 1236678 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1235515..1236678) Macrococcus caseolyticus JCSC5402 7389269 YP_002560531.1 CDS cmk NC_011999.1 1236759 1237409 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1236759..1237409) Macrococcus caseolyticus JCSC5402 7389547 YP_002560532.1 CDS MCCL_1129 NC_011999.1 1237484 1238449 D L-asparaginase 1237484..1238449 Macrococcus caseolyticus JCSC5402 7390521 YP_002560533.1 CDS MCCL_1130 NC_011999.1 1238465 1239445 R pyridine nucleotide-disulfide oxidoreductase complement(1238465..1239445) Macrococcus caseolyticus JCSC5402 7389270 YP_002560534.1 CDS MCCL_1131 NC_011999.1 1239491 1240138 R similar to functionally unknown protein; hypothetical protein complement(1239491..1240138) Macrococcus caseolyticus JCSC5402 7389271 YP_002560535.1 CDS MCCL_1132 NC_011999.1 1240157 1241191 R simlar to elastin binding protein; hypothetical protein complement(1240157..1241191) Macrococcus caseolyticus JCSC5402 7389272 YP_002560536.1 CDS MCCL_1133 NC_011999.1 1241247 1242629 R similar to ATP-dependent DNA helicase recQ; hypothetical protein complement(1241247..1242629) Macrococcus caseolyticus JCSC5402 7389273 YP_002560537.1 CDS MCCL_1134 NC_011999.1 1242619 1243563 R similar to functionally unknown protein; hypothetical protein complement(1242619..1243563) Macrococcus caseolyticus JCSC5402 7389274 YP_002560538.1 CDS MCCL_1135 NC_011999.1 1243523 1243846 R no similarity; hypothetical protein complement(1243523..1243846) Macrococcus caseolyticus JCSC5402 7389275 YP_002560539.1 CDS MCCL_1136 NC_011999.1 1243983 1244522 R similar to functionally unknown protein; hypothetical protein complement(1243983..1244522) Macrococcus caseolyticus JCSC5402 7389276 YP_002560540.1 CDS MCCL_1137 NC_011999.1 1244705 1246462 R similar to sensor kinase protein; hypothetical protein complement(1244705..1246462) Macrococcus caseolyticus JCSC5402 7389277 YP_002560541.1 CDS MCCL_1138 NC_011999.1 1246462 1247169 R response regulator protein complement(1246462..1247169) Macrococcus caseolyticus JCSC5402 7389278 YP_002560542.1 CDS resC NC_011999.1 1247188 1248423 R cytochrome c biogenesis protein ResC complement(1247188..1248423) Macrococcus caseolyticus JCSC5402 7389279 YP_002560543.1 CDS resB NC_011999.1 1248389 1250008 R cytochrome c biogenesis protein ResB complement(1248389..1250008) Macrococcus caseolyticus JCSC5402 7389506 YP_002560544.1 CDS resA NC_011999.1 1250080 1250613 R cytochrome c biogenesis protein ResA complement(1250080..1250613) Macrococcus caseolyticus JCSC5402 7389505 YP_002560545.1 CDS rluB NC_011999.1 1250698 1251435 R ribosomal large subunit pseudouridine synthase B complement(1250698..1251435) Macrococcus caseolyticus JCSC5402 7389504 YP_002560546.1 CDS MCCL_1143 NC_011999.1 1251432 1251977 R similar to segregation and condensation protein B; hypothetical protein complement(1251432..1251977) Macrococcus caseolyticus JCSC5402 7389511 YP_002560547.1 CDS MCCL_1144 NC_011999.1 1251970 1252686 R similar to functionally unknown protein; hypothetical protein complement(1251970..1252686) Macrococcus caseolyticus JCSC5402 7389280 YP_002560548.1 CDS MCCL_1145 NC_011999.1 1252716 1253234 D similar to functionally unknown protein; hypothetical protein 1252716..1253234 Macrococcus caseolyticus JCSC5402 7389281 YP_002560549.1 CDS xerD NC_011999.1 1253355 1254242 R site-specific tyrosine recombinase XerD complement(1253355..1254242) Macrococcus caseolyticus JCSC5402 7389282 YP_002560550.1 CDS MCCL_1147 NC_011999.1 1254317 1254796 R iron uptake regulatory protein complement(1254317..1254796) Macrococcus caseolyticus JCSC5402 7390502 YP_002560551.1 CDS MCCL_1148 NC_011999.1 1254912 1255448 R ADP-ribose pyrophosphatase complement(1254912..1255448) Macrococcus caseolyticus JCSC5402 7389283 YP_002560552.1 CDS MCCL_1149 NC_011999.1 1255514 1256425 D aldo/keto reductase family protein 1255514..1256425 Macrococcus caseolyticus JCSC5402 7389284 YP_002560553.1 CDS MCCL_1150 NC_011999.1 1256422 1257363 D similar to alpha/beta hydrolase; hypothetical protein 1256422..1257363 Macrococcus caseolyticus JCSC5402 7389285 YP_002560554.1 CDS MCCL_1151 NC_011999.1 1257364 1258110 R similar to short-chain dehydrogenase; hypothetical protein complement(1257364..1258110) Macrococcus caseolyticus JCSC5402 7389286 YP_002560555.1 CDS MCCL_1152 NC_011999.1 1258189 1258992 D pyrroline-5-carboxylate reductase 1258189..1258992 Macrococcus caseolyticus JCSC5402 7389287 YP_002560556.1 CDS MCCL_1153 NC_011999.1 1259113 1260033 R similar to ribonuclease Z; hypothetical protein complement(1259113..1260033) Macrococcus caseolyticus JCSC5402 7389288 YP_002560557.1 CDS zwf NC_011999.1 1260140 1261648 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1260140..1261648 Macrococcus caseolyticus JCSC5402 7389289 YP_002560558.1 CDS MCCL_1155 NC_011999.1 1261765 1262364 D similar to functionally unknown protein; hypothetical protein 1261765..1262364 Macrococcus caseolyticus JCSC5402 7390505 YP_002560559.1 CDS MCCL_1156 NC_011999.1 1262309 1263226 D similar to transcriptional regulator, AraC family; hypothetical protein 1262309..1263226 Macrococcus caseolyticus JCSC5402 7389290 YP_002560560.1 CDS gnd NC_011999.1 1263333 1264736 R 6-phosphogluconate dehydrogenase complement(1263333..1264736) Macrococcus caseolyticus JCSC5402 7389291 YP_002560561.1 CDS MCCL_1158 NC_011999.1 1264796 1265902 R peptidase T complement(1264796..1265902) Macrococcus caseolyticus JCSC5402 7391105 YP_002560562.1 CDS MCCL_1159 NC_011999.1 1266147 1267115 R similar to functionally unknown protein; hypothetical protein complement(1266147..1267115) Macrococcus caseolyticus JCSC5402 7389292 YP_002560563.1 CDS MCCL_1160 NC_011999.1 1267119 1267556 R similar to functionally unknown protein; hypothetical protein complement(1267119..1267556) Macrococcus caseolyticus JCSC5402 7389293 YP_002560564.1 CDS MCCL_1161 NC_011999.1 1267692 1268804 R leucine dehydrogenase complement(1267692..1268804) Macrococcus caseolyticus JCSC5402 7389294 YP_002560565.1 CDS MCCL_1162 NC_011999.1 1269224 1269949 R similar to glycerophosphoryl diester phosphodiesterase; hypothetical protein complement(1269224..1269949) Macrococcus caseolyticus JCSC5402 7389295 YP_002560566.1 CDS MCCL_1163 NC_011999.1 1269952 1270623 R similar to response regulator receiver; hypothetical protein complement(1269952..1270623) Macrococcus caseolyticus JCSC5402 7389296 YP_002560567.1 CDS recN NC_011999.1 1270636 1272303 R DNA repair protein RecN complement(1270636..1272303) Macrococcus caseolyticus JCSC5402 7389297 YP_002560568.1 CDS argR NC_011999.1 1272316 1272768 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(1272316..1272768) Macrococcus caseolyticus JCSC5402 7389879 YP_002560569.1 CDS MCCL_1166 NC_011999.1 1272847 1273683 R hemolysin A complement(1272847..1273683) Macrococcus caseolyticus JCSC5402 7390188 YP_002560570.1 CDS MCCL_1167 NC_011999.1 1273670 1275553 R 1-deoxy-D-xylulose-5-phosphate synthase complement(1273670..1275553) Macrococcus caseolyticus JCSC5402 7389298 YP_002560571.1 CDS MCCL_1168 NC_011999.1 1275647 1276519 R farnesyl diphosphate synthase complement(1275647..1276519) Macrococcus caseolyticus JCSC5402 7389299 YP_002560572.1 CDS xseA NC_011999.1 1276707 1278044 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1276707..1278044) Macrococcus caseolyticus JCSC5402 7389300 YP_002560573.1 CDS nusB NC_011999.1 1278044 1278436 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1278044..1278436) Macrococcus caseolyticus JCSC5402 7389301 YP_002560574.1 CDS MCCL_1171 NC_011999.1 1278479 1278826 R similar to functionally unknown protein; hypothetical protein complement(1278479..1278826) Macrococcus caseolyticus JCSC5402 7389302 YP_002560575.1 CDS accC NC_011999.1 1278912 1280261 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(1278912..1280261) Macrococcus caseolyticus JCSC5402 7389303 YP_002560576.1 CDS accB NC_011999.1 1280263 1280700 R acetyl-CoA carboxylase biotin carboxyl carrier subunit complement(1280263..1280700) Macrococcus caseolyticus JCSC5402 7390173 YP_002560577.1 CDS efp NC_011999.1 1280820 1281377 R translation elongation factor EF-P complement(1280820..1281377) Macrococcus caseolyticus JCSC5402 7390172 YP_002560578.1 CDS MCCL_1176 NC_011999.1 1281402 1282454 R Xaa-Pro dipeptidase complement(1281402..1282454) Macrococcus caseolyticus JCSC5402 7390559 YP_002560579.1 CDS MCCL_1175 NC_011999.1 1282431 1283147 D similar to functionally unknown protein; hypothetical protein 1282431..1283147 Macrococcus caseolyticus JCSC5402 7389305 YP_002560580.1 CDS MCCL_1177 NC_011999.1 1283162 1283992 R similar to lipoate protein ligase; hypothetical protein complement(1283162..1283992) Macrococcus caseolyticus JCSC5402 7389304 YP_002560581.1 CDS MCCL_1178 NC_011999.1 1284097 1284477 D similar to rhodanese-related sulfurtransferase; hypothetical protein 1284097..1284477 Macrococcus caseolyticus JCSC5402 7389306 YP_002560582.1 CDS gcvP2 NC_011999.1 1284516 1285994 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(1284516..1285994) Macrococcus caseolyticus JCSC5402 7389307 YP_002560583.1 CDS gcvP1 NC_011999.1 1285978 1287321 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(1285978..1287321) Macrococcus caseolyticus JCSC5402 7391083 YP_002560584.1 CDS gcvT NC_011999.1 1287334 1288452 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(1287334..1288452) Macrococcus caseolyticus JCSC5402 7391082 YP_002560585.1 CDS MCCL_1182 NC_011999.1 1288557 1289063 R similar to shikimate kinase; hypothetical protein complement(1288557..1289063) Macrococcus caseolyticus JCSC5402 7391084 YP_002560586.1 CDS MCCL_1183 NC_011999.1 1289224 1289676 R similar to functionally unknown protein; hypothetical protein complement(1289224..1289676) Macrococcus caseolyticus JCSC5402 7389308 YP_002560587.1 CDS MCCL_1184 NC_011999.1 1289850 1290275 R similar to comG operon protein 4; hypothetical protein complement(1289850..1290275) Macrococcus caseolyticus JCSC5402 7389309 YP_002560588.1 CDS MCCL_1185 NC_011999.1 1290268 1290600 R exogenous DNA-binding protein comGC complement(1290268..1290600) Macrococcus caseolyticus JCSC5402 7389310 YP_002560589.1 CDS MCCL_1186 NC_011999.1 1290613 1291686 R similar to DNA transport machinery protein comGB; hypothetical protein complement(1290613..1291686) Macrococcus caseolyticus JCSC5402 7389149 YP_002560590.1 CDS MCCL_1187 NC_011999.1 1291637 1292608 R similar to late competence protein comGA; hypothetical protein complement(1291637..1292608) Macrococcus caseolyticus JCSC5402 7389150 YP_002560591.1 CDS MCCL_1188 NC_011999.1 1293095 1293715 R metallo-beta-lactamase superfamily protein complement(1293095..1293715) Macrococcus caseolyticus JCSC5402 7389151 YP_002560592.1 CDS MCCL_1189 NC_011999.1 1293733 1294044 D similar to functionally unknown protein; hypothetical protein 1293733..1294044 Macrococcus caseolyticus JCSC5402 7389152 YP_002560593.1 CDS MCCL_1190 NC_011999.1 1294071 1294382 R similar to functionally unknown protein; hypothetical protein complement(1294071..1294382) Macrococcus caseolyticus JCSC5402 7389153 YP_002560594.1 CDS MCCL_1191 NC_011999.1 1294382 1295350 R similar to functionally unknown protein; hypothetical protein complement(1294382..1295350) Macrococcus caseolyticus JCSC5402 7389154 YP_002560595.1 CDS MCCL_1192 NC_011999.1 1295543 1296991 R similar to functionally unknown protein; hypothetical protein complement(1295543..1296991) Macrococcus caseolyticus JCSC5402 7389155 YP_002560596.1 CDS MCCL_1193 NC_011999.1 1296967 1297533 R similar to 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(1296967..1297533) Macrococcus caseolyticus JCSC5402 7389156 YP_002560597.1 CDS phoU NC_011999.1 1297849 1298562 R phosphate transporter regulatory protein PhoU complement(1297849..1298562) Macrococcus caseolyticus JCSC5402 7389157 YP_002560598.1 CDS pstB NC_011999.1 1298480 1299370 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(1298480..1299370) Macrococcus caseolyticus JCSC5402 7389823 YP_002560599.1 CDS pstA NC_011999.1 1299395 1300288 R phosphate ABC transporter permease complement(1299395..1300288) Macrococcus caseolyticus JCSC5402 7389843 YP_002560600.1 CDS pstC NC_011999.1 1300290 1301219 R phosphate ABC transporter permease complement(1300290..1301219) Macrococcus caseolyticus JCSC5402 7389842 YP_002560601.1 CDS pstS NC_011999.1 1301289 1302251 R phosphate ABC transporter substrate-binding protein complement(1301289..1302251) Macrococcus caseolyticus JCSC5402 7389844 YP_002560602.1 CDS pbpC NC_011999.1 1302393 1304447 R penicillin-binding protein 3 complement(1302393..1304447) Macrococcus caseolyticus JCSC5402 7389845 YP_002560603.1 CDS sodA NC_011999.1 1304556 1305155 R superoxide dismutase SodA complement(1304556..1305155) Macrococcus caseolyticus JCSC5402 7389803 YP_002560604.1 CDS MCCL_1201 NC_011999.1 1305288 1306019 D similar to functionally unknown protein; hypothetical protein 1305288..1306019 Macrococcus caseolyticus JCSC5402 7389581 YP_002560605.1 CDS ispG NC_011999.1 1306096 1307211 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1306096..1307211 Macrococcus caseolyticus JCSC5402 7389158 YP_002560606.1 CDS MCCL_1203 NC_011999.1 1307198 1307776 D similar to functionally unknown protein; hypothetical protein 1307198..1307776 Macrococcus caseolyticus JCSC5402 7391081 YP_002560607.1 CDS MCCL_1204 NC_011999.1 1307799 1308206 R zinc-specific metalloregulatory protein complement(1307799..1308206) Macrococcus caseolyticus JCSC5402 7389159 YP_002560608.1 CDS mreB NC_011999.1 1308196 1309047 R ABC transporter permease complement(1308196..1309047) Macrococcus caseolyticus JCSC5402 7389160 YP_002560609.1 CDS mreA NC_011999.1 1309044 1309814 R ABC transporter ATPase complement(1309044..1309814) Macrococcus caseolyticus JCSC5402 7390708 YP_002560610.1 CDS MCCL_1207 NC_011999.1 1309883 1310788 R type IV apurinic/apyrimidinic endonuclease complement(1309883..1310788) Macrococcus caseolyticus JCSC5402 7390707 YP_002560611.1 CDS MCCL_1208 NC_011999.1 1310790 1312121 R ATP-dependent RNA helicase complement(1310790..1312121) Macrococcus caseolyticus JCSC5402 7389161 YP_002560612.1 CDS ispH NC_011999.1 1312249 1313217 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1312249..1313217 Macrococcus caseolyticus JCSC5402 7389162 YP_002560613.1 CDS MCCL_1210 NC_011999.1 1313255 1314337 R similar to functionally unknown protein; hypothetical protein complement(1313255..1314337) Macrococcus caseolyticus JCSC5402 7390676 YP_002560614.1 CDS MCCL_1211 NC_011999.1 1314324 1315013 R similar to functionally unknown protein; hypothetical protein complement(1314324..1315013) Macrococcus caseolyticus JCSC5402 7389163 YP_002560615.1 CDS MCCL_1212 NC_011999.1 1315086 1315439 R similar to cytochrome c550; hypothetical protein complement(1315086..1315439) Macrococcus caseolyticus JCSC5402 7389164 YP_002560616.1 CDS sigA NC_011999.1 1315529 1316629 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(1315529..1316629) Macrococcus caseolyticus JCSC5402 7389165 YP_002560617.1 CDS MCCL_1214 NC_011999.1 1316651 1318402 R similar to DNA primase; hypothetical protein complement(1316651..1318402) Macrococcus caseolyticus JCSC5402 7389579 YP_002560618.1 CDS MCCL_1215 NC_011999.1 1318416 1319231 R similar to functionally unknown protein; hypothetical protein complement(1318416..1319231) Macrococcus caseolyticus JCSC5402 7389166 YP_002560619.1 CDS MCCL_1216 NC_011999.1 1319243 1319980 R similar to functionally unknown protein; hypothetical protein complement(1319243..1319980) Macrococcus caseolyticus JCSC5402 7389167 YP_002560620.1 CDS glyS NC_011999.1 1320159 1321547 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 1320159..1321547 Macrococcus caseolyticus JCSC5402 7389168 YP_002560621.1 CDS MCCL_1218 NC_011999.1 1321586 1322341 R similar to recombination protein RecO; hypothetical protein complement(1321586..1322341) Macrococcus caseolyticus JCSC5402 7391103 YP_002560622.1 CDS era NC_011999.1 1322341 1323243 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1322341..1323243) Macrococcus caseolyticus JCSC5402 7389169 YP_002560623.1 CDS MCCL_1220 NC_011999.1 1323243 1323647 R cytidine deaminase complement(1323243..1323647) Macrococcus caseolyticus JCSC5402 7389170 YP_002560624.1 CDS MCCL_1221 NC_011999.1 1323659 1324006 R diacylglycerol kinase complement(1323659..1324006) Macrococcus caseolyticus JCSC5402 7389171 YP_002560625.1 CDS MCCL_1222 NC_011999.1 1324003 1324467 R similar to functionally unknown protein; hypothetical protein complement(1324003..1324467) Macrococcus caseolyticus JCSC5402 7389172 YP_002560626.1 CDS phoH NC_011999.1 1324468 1325412 R phosphate starvation-inducible protein PhoH complement(1324468..1325412) Macrococcus caseolyticus JCSC5402 7389173 YP_002560627.1 CDS MCCL_1224 NC_011999.1 1325472 1325891 R similar to functionally unknown protein; hypothetical protein complement(1325472..1325891) Macrococcus caseolyticus JCSC5402 7389821 YP_002560628.1 CDS MCCL_1225 NC_011999.1 1326023 1326577 R similar to functionally unknown protein; hypothetical protein complement(1326023..1326577) Macrococcus caseolyticus JCSC5402 7389174 YP_002560629.1 CDS MCCL_1226 NC_011999.1 1326589 1327578 R similar to functionally unknown protein; hypothetical protein complement(1326589..1327578) Macrococcus caseolyticus JCSC5402 7389175 YP_002560630.1 CDS MCCL_1227 NC_011999.1 1327596 1328225 R similar to functionally unknown protein; hypothetical protein complement(1327596..1328225) Macrococcus caseolyticus JCSC5402 7389176 YP_002560631.1 CDS MCCL_1228 NC_011999.1 1328660 1330006 R similar to functionally unknown protein; hypothetical protein complement(1328660..1330006) Macrococcus caseolyticus JCSC5402 7389177 YP_002560632.1 CDS MCCL_1229 NC_011999.1 1330126 1330863 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1330126..1330863) Macrococcus caseolyticus JCSC5402 7389178 YP_002560633.1 CDS prmA NC_011999.1 1330865 1331800 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1330865..1331800) Macrococcus caseolyticus JCSC5402 7389179 YP_002560634.1 CDS dnaJ NC_011999.1 1331803 1332921 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1331803..1332921) Macrococcus caseolyticus JCSC5402 7389180 YP_002560635.1 CDS dnaK NC_011999.1 1333026 1334849 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1333026..1334849) Macrococcus caseolyticus JCSC5402 7390553 YP_002560636.1 CDS grpE NC_011999.1 1334901 1335500 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1334901..1335500) Macrococcus caseolyticus JCSC5402 7390554 YP_002560637.1 CDS hrcA NC_011999.1 1335503 1336456 R heat-inducible transcriptional repressor HrcA complement(1335503..1336456) Macrococcus caseolyticus JCSC5402 7391111 YP_002560638.1 CDS MCCL_1235 NC_011999.1 1336568 1337683 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1336568..1337683) Macrococcus caseolyticus JCSC5402 7391128 YP_002560639.1 CDS lepA NC_011999.1 1337723 1339546 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1337723..1339546) Macrococcus caseolyticus JCSC5402 7389181 YP_002560640.1 CDS holA NC_011999.1 1340122 1340949 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1340122..1340949) Macrococcus caseolyticus JCSC5402 7391156 YP_002560641.1 CDS MCCL_1238 NC_011999.1 1341404 1343635 R similar to DNA internalization-related competence protein ComEC/Rec2; hypothetical protein complement(1341404..1343635) Macrococcus caseolyticus JCSC5402 7389182 YP_002560642.1 CDS comEB NC_011999.1 1343648 1344109 R late competence operon required for DNA binding and uptake ComEB complement(1343648..1344109) Macrococcus caseolyticus JCSC5402 7389183 YP_002560643.1 CDS MCCL_1240 NC_011999.1 1344167 1344829 R similar to competence protein comEA; hypothetical protein complement(1344167..1344829) Macrococcus caseolyticus JCSC5402 7390524 YP_002560644.1 CDS MCCL_1241 NC_011999.1 1344905 1345624 R similar to methyltransferase; hypothetical protein complement(1344905..1345624) Macrococcus caseolyticus JCSC5402 7389184 YP_002560645.1 CDS MCCL_1242 NC_011999.1 1345624 1345986 R similar to functionally unknown protein; hypothetical protein complement(1345624..1345986) Macrococcus caseolyticus JCSC5402 7389185 YP_002560646.1 CDS MCCL_1243 NC_011999.1 1345990 1346556 R similar to functionally unknown protein; hypothetical protein complement(1345990..1346556) Macrococcus caseolyticus JCSC5402 7389186 YP_002560647.1 CDS MCCL_1244 NC_011999.1 1346534 1347112 R similar to nicotinate-nucleotide adenylyltransferase; hypothetical protein complement(1346534..1347112) Macrococcus caseolyticus JCSC5402 7389187 YP_002560648.1 CDS MCCL_1245 NC_011999.1 1347399 1348202 R similar to shikimate 5-dehydrogenase; hypothetical protein complement(1347399..1348202) Macrococcus caseolyticus JCSC5402 7389188 YP_002560649.1 CDS MCCL_1246 NC_011999.1 1348213 1349403 R in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH complement(1348213..1349403) Macrococcus caseolyticus JCSC5402 7389189 YP_002560650.1 CDS MCCL_1247 NC_011999.1 1349572 1349964 R similar to HAD-superfamily phosphatase; hypothetical protein complement(1349572..1349964) Macrococcus caseolyticus JCSC5402 7390132 YP_002560651.1 CDS MCCL_1248 NC_011999.1 1350315 1351016 R 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(1350315..1351016) Macrococcus caseolyticus JCSC5402 7389191 YP_002560652.1 CDS greA NC_011999.1 1351061 1351537 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1351061..1351537) Macrococcus caseolyticus JCSC5402 7389192 YP_002560653.1 CDS MCCL_1250 NC_011999.1 1351560 1352180 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(1351560..1352180) Macrococcus caseolyticus JCSC5402 7391106 YP_002560654.1 CDS MCCL_1251 NC_011999.1 1352180 1353442 R similar to peptidase; hypothetical protein complement(1352180..1353442) Macrococcus caseolyticus JCSC5402 7389193 YP_002560655.1 CDS MCCL_1252 NC_011999.1 1353466 1354389 R similar to peptidase; hypothetical protein complement(1353466..1354389) Macrococcus caseolyticus JCSC5402 7389194 YP_002560656.1 CDS MCCL_1253 NC_011999.1 1354401 1355024 R similar to O-methyltransferase; hypothetical protein complement(1354401..1355024) Macrococcus caseolyticus JCSC5402 7389195 YP_002560657.1 CDS MCCL_1254 NC_011999.1 1355200 1356339 R similar to aminodeoxychorismate lyase; hypothetical protein complement(1355200..1356339) Macrococcus caseolyticus JCSC5402 7389196 YP_002560658.1 CDS MCCL_1255 NC_011999.1 1356352 1356672 R similar to functionally unknown protein; hypothetical protein complement(1356352..1356672) Macrococcus caseolyticus JCSC5402 7389197 YP_002560659.1 CDS MCCL_1256 NC_011999.1 1356679 1357098 R similar to holliday junction resolvase; hypothetical protein complement(1356679..1357098) Macrococcus caseolyticus JCSC5402 7389198 YP_002560660.1 CDS MCCL_1257 NC_011999.1 1357091 1357336 R similar to functionally unknown protein; hypothetical protein complement(1357091..1357336) Macrococcus caseolyticus JCSC5402 7389199 YP_002560661.1 CDS alaS NC_011999.1 1357416 1360040 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1357416..1360040) Macrococcus caseolyticus JCSC5402 7389200 YP_002560662.1 CDS MCCL_1259 NC_011999.1 1360287 1362677 R exodeoxyribonuclease V alpha subunit complement(1360287..1362677) Macrococcus caseolyticus JCSC5402 7390179 YP_002560663.1 CDS MCCL_1260 NC_011999.1 1362680 1363339 R similar to tetratricopeptide repeat family protein; hypothetical protein complement(1362680..1363339) Macrococcus caseolyticus JCSC5402 7389201 YP_002560664.1 CDS mnmA NC_011999.1 1363400 1364515 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1363400..1364515) Macrococcus caseolyticus JCSC5402 7389202 YP_002560665.1 CDS MCCL_1262 NC_011999.1 1364527 1365654 R similar to functionally unknown protein; hypothetical protein complement(1364527..1365654) Macrococcus caseolyticus JCSC5402 7390483 YP_002560666.1 CDS MCCL_1263 NC_011999.1 1365826 1366821 D similar to bacterial luciferase family protein; hypothetical protein 1365826..1366821 Macrococcus caseolyticus JCSC5402 7389203 YP_002560667.1 CDS MCCL_1264 NC_011999.1 1367335 1367757 R similar to transcriptional regulator; hypothetical protein complement(1367335..1367757) Macrococcus caseolyticus JCSC5402 7389204 YP_002560668.1 CDS MCCL_1265 NC_011999.1 1367845 1369104 D similar to ATPase, AAA family; recombination factor protein RarA 1367845..1369104 Macrococcus caseolyticus JCSC5402 7389205 YP_002560669.1 CDS MCCL_1266 NC_011999.1 1369195 1370169 R similar to molybdenum cofactor biosynthesis protein; hypothetical protein complement(1369195..1370169) Macrococcus caseolyticus JCSC5402 7389206 YP_002560670.1 CDS aspS NC_011999.1 1370304 1372082 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1370304..1372082) Macrococcus caseolyticus JCSC5402 7389207 YP_002560671.1 CDS hisS NC_011999.1 1372086 1373348 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1372086..1373348) Macrococcus caseolyticus JCSC5402 7390199 YP_002560672.1 CDS MCCL_1269 NC_011999.1 1373648 1374493 R N-acetylmuramoyl-L-alanine amidase complement(1373648..1374493) Macrococcus caseolyticus JCSC5402 7391125 YP_002560673.1 CDS MCCL_1270 NC_011999.1 1374490 1374942 R D-tyrosyl-tRNA deacylase complement(1374490..1374942) Macrococcus caseolyticus JCSC5402 7389208 YP_002560674.1 CDS MCCL_1271 NC_011999.1 1374951 1377143 R GTP pyrophosphokinase complement(1374951..1377143) Macrococcus caseolyticus JCSC5402 7389209 YP_002560675.1 CDS apt NC_011999.1 1377248 1377769 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1377248..1377769) Macrococcus caseolyticus JCSC5402 7389210 YP_002560676.1 CDS MCCL_1273 NC_011999.1 1377780 1380041 R similar to single-strand DNA-specific exonuclease; hypothetical protein complement(1377780..1380041) Macrococcus caseolyticus JCSC5402 7390185 YP_002560677.1 CDS MCCL_1274 NC_011999.1 1380069 1381193 R similar to amidohydrolase; hypothetical protein complement(1380069..1381193) Macrococcus caseolyticus JCSC5402 7389211 YP_002560678.1 CDS MCCL_1275 NC_011999.1 1381177 1382292 R similar to mandelate racemase, muconate lactonizing enzyme; hypothetical protein complement(1381177..1382292) Macrococcus caseolyticus JCSC5402 7389212 YP_002560679.1 CDS secDF NC_011999.1 1382444 1384735 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(1382444..1384735) Macrococcus caseolyticus JCSC5402 7389213 YP_002560680.1 CDS tgt NC_011999.1 1385089 1386228 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1385089..1386228) Macrococcus caseolyticus JCSC5402 7389574 YP_002560681.1 CDS queA NC_011999.1 1386240 1387262 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1386240..1387262) Macrococcus caseolyticus JCSC5402 7390462 YP_002560682.1 CDS ruvB NC_011999.1 1387265 1388278 R holliday junction DNA helicase RuvB complement(1387265..1388278) Macrococcus caseolyticus JCSC5402 7389873 YP_002560683.1 CDS ruvA NC_011999.1 1388294 1388875 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1388294..1388875) Macrococcus caseolyticus JCSC5402 7389566 YP_002560684.1 CDS MCCL_1281 NC_011999.1 1388884 1389339 R similar to amino acid-binding ACT domain protein; hypothetical protein complement(1388884..1389339) Macrococcus caseolyticus JCSC5402 7389565 YP_002560685.1 CDS obgE NC_011999.1 1389343 1390632 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1389343..1390632) Macrococcus caseolyticus JCSC5402 7389214 YP_002560686.1 CDS MCCL_1283 NC_011999.1 1390633 1391289 R similar to sporulation responce regulatory protein Spo0B; hypothetical protein complement(1390633..1391289) Macrococcus caseolyticus JCSC5402 7389215 YP_002560687.1 CDS MCCL_1284 NC_011999.1 1391593 1391913 R similar to functionally unknown protein; hypothetical protein complement(1391593..1391913) Macrococcus caseolyticus JCSC5402 7389216 YP_002560688.1 CDS rplU NC_011999.1 1391913 1392221 R 50S ribosomal protein L21 complement(1391913..1392221) Macrococcus caseolyticus JCSC5402 7389217 YP_002560689.1 CDS MCCL_1286 NC_011999.1 1392358 1392861 R similar to rod shape-determining protein MreD; hypothetical protein complement(1392358..1392861) Macrococcus caseolyticus JCSC5402 7389532 YP_002560690.1 CDS MCCL_1287 NC_011999.1 1392861 1393724 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1392861..1393724) Macrococcus caseolyticus JCSC5402 7389218 YP_002560691.1 CDS MCCL_1288 NC_011999.1 1393754 1394893 R similar to beta-hexosaminidase; hypothetical protein complement(1393754..1394893) Macrococcus caseolyticus JCSC5402 7389219 YP_002560692.1 CDS MCCL_1289 NC_011999.1 1395043 1395453 R similar to functionally unknown protein; hypothetical protein complement(1395043..1395453) Macrococcus caseolyticus JCSC5402 7389220 YP_002560693.1 CDS MCCL_1290 NC_011999.1 1395463 1396041 R similar to ribosomal-protein-alanine acetyltransferase; hypothetical protein complement(1395463..1396041) Macrococcus caseolyticus JCSC5402 7389221 YP_002560694.1 CDS MCCL_1291 NC_011999.1 1395989 1397722 R ABC transporter ATP-binding protein/permease complement(1395989..1397722) Macrococcus caseolyticus JCSC5402 7389222 YP_002560695.1 CDS MCCL_1292 NC_011999.1 1397719 1399458 R ABC transporter ATP-binding protein/permease complement(1397719..1399458) Macrococcus caseolyticus JCSC5402 7389223 YP_002560696.1 CDS MCCL_1293 NC_011999.1 1399725 1400177 R no similarity; hypothetical protein complement(1399725..1400177) Macrococcus caseolyticus JCSC5402 7389224 YP_002560697.1 CDS MCCL_1294 NC_011999.1 1400087 1400758 R DNA repair protein RadC complement(1400087..1400758) Macrococcus caseolyticus JCSC5402 7389225 YP_002560698.1 CDS MCCL_1295 NC_011999.1 1400758 1401495 R similar to aspartic endopeptidase; hypothetical protein complement(1400758..1401495) Macrococcus caseolyticus JCSC5402 7389226 YP_002560699.1 CDS MCCL_1296 NC_011999.1 1401665 1403047 R similar to C4-dicarboxylate anaerobic carrier protein; hypothetical protein complement(1401665..1403047) Macrococcus caseolyticus JCSC5402 7389227 YP_002560700.1 CDS MCCL_1297 NC_011999.1 1403207 1404469 R folylpolyglutamate synthase complement(1403207..1404469) Macrococcus caseolyticus JCSC5402 7389228 YP_002560701.1 CDS valS NC_011999.1 1404475 1407102 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1404475..1407102) Macrococcus caseolyticus JCSC5402 7389229 YP_002560702.1 CDS MCCL_1299 NC_011999.1 1407584 1408474 R similar to ammonia monooxygenase; hypothetical protein complement(1407584..1408474) Macrococcus caseolyticus JCSC5402 7390498 YP_002560703.1 CDS MCCL_1300 NC_011999.1 1408553 1408969 R no similarity; hypothetical protein complement(1408553..1408969) Macrococcus caseolyticus JCSC5402 7389311 YP_002560704.1 CDS hemL NC_011999.1 1409066 1410349 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1409066..1410349) Macrococcus caseolyticus JCSC5402 7389312 YP_002560705.1 CDS hemB NC_011999.1 1410349 1411332 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1410349..1411332) Macrococcus caseolyticus JCSC5402 7391119 YP_002560706.1 CDS MCCL_1303 NC_011999.1 1411348 1412016 R similar to uroporphyrinogen III synthase; hypothetical protein complement(1411348..1412016) Macrococcus caseolyticus JCSC5402 7391116 YP_002560707.1 CDS hemC NC_011999.1 1412032 1412955 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(1412032..1412955) Macrococcus caseolyticus JCSC5402 7389313 YP_002560708.1 CDS MCCL_1305 NC_011999.1 1412965 1413798 R similar to HemA concentration negative effector HemX; hypothetical protein complement(1412965..1413798) Macrococcus caseolyticus JCSC5402 7389314 YP_002560709.1 CDS MCCL_1306 NC_011999.1 1413807 1415147 R glutamyl-tRNA reductase complement(1413807..1415147) Macrococcus caseolyticus JCSC5402 7389315 YP_002560710.1 CDS engB NC_011999.1 1415238 1415825 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1415238..1415825) Macrococcus caseolyticus JCSC5402 7389316 YP_002560711.1 CDS clpX NC_011999.1 1415910 1417175 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1415910..1417175) Macrococcus caseolyticus JCSC5402 7389317 YP_002560712.1 CDS tig NC_011999.1 1417309 1418592 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1417309..1418592) Macrococcus caseolyticus JCSC5402 7390520 YP_002560713.1 CDS MCCL_1310 NC_011999.1 1418682 1419626 R similar to functionally unknown protein; hypothetical protein complement(1418682..1419626) Macrococcus caseolyticus JCSC5402 7389318 YP_002560714.1 CDS MCCL_1311 NC_011999.1 1419628 1420356 R similar to functionally unknown protein; hypothetical protein complement(1419628..1420356) Macrococcus caseolyticus JCSC5402 7389319 YP_002560715.1 CDS MCCL_1312 NC_011999.1 1420448 1421179 D similar to transcriptional regulator; hypothetical protein 1420448..1421179 Macrococcus caseolyticus JCSC5402 7389320 YP_002560716.1 CDS MCCL_1313 NC_011999.1 1421496 1421996 R similar to functionally unknown protein; hypothetical protein complement(1421496..1421996) Macrococcus caseolyticus JCSC5402 7390133 YP_002560717.1 CDS MCCL_1314 NC_011999.1 1422008 1422583 R hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase complement(1422008..1422583) Macrococcus caseolyticus JCSC5402 7389322 YP_002560718.1 CDS MCCL_1315 NC_011999.1 1422580 1423323 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(1422580..1423323) Macrococcus caseolyticus JCSC5402 7389323 YP_002560719.1 CDS MCCL_1316 NC_011999.1 1423361 1423816 R similar to MarR family transcriptional regulator; hypothetical protein complement(1423361..1423816) Macrococcus caseolyticus JCSC5402 7389324 YP_002560720.1 CDS sdhB NC_011999.1 1423955 1424719 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(1423955..1424719) Macrococcus caseolyticus JCSC5402 7389325 YP_002560721.1 CDS sdhA NC_011999.1 1424722 1426485 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(1424722..1426485) Macrococcus caseolyticus JCSC5402 7389571 YP_002560722.1 CDS sdhC NC_011999.1 1426516 1427127 R succinate dehydrogenase cytochrome b558 subunit complement(1426516..1427127) Macrococcus caseolyticus JCSC5402 7389569 YP_002560723.1 CDS uvrC NC_011999.1 1427330 1429126 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1427330..1429126) Macrococcus caseolyticus JCSC5402 7389572 YP_002560724.1 CDS trxA NC_011999.1 1429187 1429501 R thioredoxin complement(1429187..1429501) Macrococcus caseolyticus JCSC5402 7390497 YP_002560725.1 CDS MCCL_1322 NC_011999.1 1429688 1432039 R MutS2; MutS-II; involved in blocking ous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(1429688..1432039) Macrococcus caseolyticus JCSC5402 7390487 YP_002560726.1 CDS rpoD NC_011999.1 1432029 1433738 R hypothetical protein complement(1432029..1433738) Macrococcus caseolyticus JCSC5402 7389326 YP_002560727.1 CDS MCCL_1324 NC_011999.1 1433785 1434327 R similar to colicin V production protein; hypothetical protein complement(1433785..1434327) Macrococcus caseolyticus JCSC5402 7389545 YP_002560728.1 CDS MCCL_1325 NC_011999.1 1434692 1435633 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1434692..1435633 Macrococcus caseolyticus JCSC5402 7389327 YP_002560729.1 CDS pheT NC_011999.1 1435657 1438056 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1435657..1438056) Macrococcus caseolyticus JCSC5402 7389328 YP_002560730.1 CDS pheS NC_011999.1 1438043 1439113 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1438043..1439113) Macrococcus caseolyticus JCSC5402 7389818 YP_002560731.1 CDS MCCL_1328 NC_011999.1 1439557 1440603 D no similarity; hypothetical protein 1439557..1440603 Macrococcus caseolyticus JCSC5402 7389817 YP_002560732.1 CDS MCCL_1329 NC_011999.1 1440787 1441527 R rRNA methyltransferase complement(1440787..1441527) Macrococcus caseolyticus JCSC5402 7389329 YP_002560733.1 CDS MCCL_1330 NC_011999.1 1441527 1441967 R similar to transcriptional regulator; hypothetical protein complement(1441527..1441967) Macrococcus caseolyticus JCSC5402 7389330 YP_002560734.1 CDS MCCL_1331 NC_011999.1 1442101 1443741 D indole-3-pyruvate decarboxylase 1442101..1443741 Macrococcus caseolyticus JCSC5402 7389331 YP_002560735.1 CDS MCCL_1332 NC_011999.1 1443903 1445333 D similar to Na+/H+ antiporter; hypothetical protein 1443903..1445333 Macrococcus caseolyticus JCSC5402 7389332 YP_002560736.1 CDS MCCL_1333 NC_011999.1 1445347 1446081 R similar to SAM-dependent methyltransferases; hypothetical protein complement(1445347..1446081) Macrococcus caseolyticus JCSC5402 7389333 YP_002560737.1 CDS MCCL_1334 NC_011999.1 1446289 1447368 R similar to peptidase; hypothetical protein complement(1446289..1447368) Macrococcus caseolyticus JCSC5402 7389334 YP_002560738.1 CDS MCCL_1335 NC_011999.1 1447409 1448629 R similar to functionally unknown protein; hypothetical protein complement(1447409..1448629) Macrococcus caseolyticus JCSC5402 7389335 YP_002560739.1 CDS MCCL_1336 NC_011999.1 1448689 1449321 R similar to functionally unknown protein; hypothetical protein complement(1448689..1449321) Macrococcus caseolyticus JCSC5402 7389336 YP_002560740.1 CDS MCCL_1337 NC_011999.1 1449548 1450906 R no similarity; hypothetical protein complement(1449548..1450906) Macrococcus caseolyticus JCSC5402 7389337 YP_002560741.1 CDS MCCL_1338 NC_011999.1 1450941 1451945 R similar to uroporphyrin-III C-methyltransferase; hypothetical protein complement(1450941..1451945) Macrococcus caseolyticus JCSC5402 7389338 YP_002560742.1 CDS nasE NC_011999.1 1451936 1452247 R nitrite reductase small subunit complement(1451936..1452247) Macrococcus caseolyticus JCSC5402 7389339 YP_002560743.1 CDS nasD NC_011999.1 1452250 1454652 R nitrite reductase large subunit complement(1452250..1454652) Macrococcus caseolyticus JCSC5402 7390729 YP_002560744.1 CDS MCCL_1341 NC_011999.1 1454679 1455104 R similar to siroheme synthase; hypothetical protein complement(1454679..1455104) Macrococcus caseolyticus JCSC5402 7390728 YP_002560745.1 CDS MCCL_1342 NC_011999.1 1455085 1455789 R similar to transcriptional regulator NirR; hypothetical protein complement(1455085..1455789) Macrococcus caseolyticus JCSC5402 7389340 YP_002560746.1 CDS rplT NC_011999.1 1455982 1456338 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1455982..1456338) Macrococcus caseolyticus JCSC5402 7389341 YP_002560747.1 CDS rpmI NC_011999.1 1456366 1456566 R 50S ribosomal protein L35 complement(1456366..1456566) Macrococcus caseolyticus JCSC5402 7389531 YP_002560748.1 CDS infC NC_011999.1 1456579 1457115 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1456579..1457115) Macrococcus caseolyticus JCSC5402 7389540 YP_002560749.1 CDS lysP NC_011999.1 1457290 1458864 R lysine-specific permease complement(1457290..1458864) Macrococcus caseolyticus JCSC5402 7391145 YP_002560750.1 CDS thrS NC_011999.1 1459087 1461015 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1459087..1461015) Macrococcus caseolyticus JCSC5402 7390674 YP_002560751.1 CDS dnaI NC_011999.1 1461329 1462252 R Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI complement(1461329..1462252) Macrococcus caseolyticus JCSC5402 7390471 YP_002560752.1 CDS dnaB NC_011999.1 1462249 1463589 R chromosome replication initiation/membrane attachment protein complement(1462249..1463589) Macrococcus caseolyticus JCSC5402 7390552 YP_002560753.1 CDS nrdR NC_011999.1 1463598 1464071 R similar to transcriptional regulator NrdR; NrdR family transcriptional regulator complement(1463598..1464071) Macrococcus caseolyticus JCSC5402 7390549 YP_002560754.1 CDS MCCL_1351 NC_011999.1 1464186 1464887 D similar to Lipolytic enzyme, G-D-S-L; hypothetical protein 1464186..1464887 Macrococcus caseolyticus JCSC5402 7389342 YP_002560755.1 CDS MCCL_1352 NC_011999.1 1464923 1465240 R similar to functionally unknown protein; hypothetical protein complement(1464923..1465240) Macrococcus caseolyticus JCSC5402 7389343 YP_002560756.1 CDS MCCL_1353 NC_011999.1 1465237 1465557 R similar to functionally unknown protein; hypothetical protein complement(1465237..1465557) Macrococcus caseolyticus JCSC5402 7389344 YP_002560757.1 CDS gapB NC_011999.1 1465638 1466648 R glyceraldehyde-3-phosphate dehydrogenase complement(1465638..1466648) Macrococcus caseolyticus JCSC5402 7389345 YP_002560758.1 CDS coaE NC_011999.1 1466768 1467382 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(1466768..1467382) Macrococcus caseolyticus JCSC5402 7390586 YP_002560759.1 CDS MCCL_1356 NC_011999.1 1467361 1468233 R formamidopyrimidine-DNA glycosylase complement(1467361..1468233) Macrococcus caseolyticus JCSC5402 7389346 YP_002560760.1 CDS polA NC_011999.1 1468242 1470869 R DNA polymerase I complement(1468242..1470869) Macrococcus caseolyticus JCSC5402 7389347 YP_002560761.1 CDS MCCL_1358 NC_011999.1 1471028 1472740 R similar to alkaline phosphatase synthesis sensor protein; hypothetical protein complement(1471028..1472740) Macrococcus caseolyticus JCSC5402 7389825 YP_002560762.1 CDS phoP NC_011999.1 1472733 1473446 R alkaline phosphatase synthesis transcriptional regulatory protein complement(1472733..1473446) Macrococcus caseolyticus JCSC5402 7389348 YP_002560763.1 CDS MCCL_1360 NC_011999.1 1473563 1474492 R malate dehydrogenase complement(1473563..1474492) Macrococcus caseolyticus JCSC5402 7389822 YP_002560764.1 CDS citC NC_011999.1 1474552 1475814 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1474552..1475814) Macrococcus caseolyticus JCSC5402 7389349 YP_002560765.1 CDS citZ NC_011999.1 1475839 1477011 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(1475839..1477011) Macrococcus caseolyticus JCSC5402 7390515 YP_002560766.1 CDS aapA NC_011999.1 1477178 1478587 D D-serine D-alanine glycine transporter 1477178..1478587 Macrococcus caseolyticus JCSC5402 7390516 YP_002560767.1 CDS pykA NC_011999.1 1478676 1480517 R pyruvate kinase complement(1478676..1480517) Macrococcus caseolyticus JCSC5402 7390170 YP_002560768.1 CDS pfk NC_011999.1 1480477 1481436 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1480477..1481436) Macrococcus caseolyticus JCSC5402 7389857 YP_002560769.1 CDS accA NC_011999.1 1481616 1482560 R acetyl-CoA carboxylase carboxyl transferase subunit alpha complement(1481616..1482560) Macrococcus caseolyticus JCSC5402 7389812 YP_002560770.1 CDS accD NC_011999.1 1482560 1483450 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1482560..1483450) Macrococcus caseolyticus JCSC5402 7390171 YP_002560771.1 CDS MCCL_1368 NC_011999.1 1483422 1483895 R similar to GntR family transcriptional regulator; hypothetical protein complement(1483422..1483895) Macrococcus caseolyticus JCSC5402 7390174 YP_002560772.1 CDS dnaE NC_011999.1 1483935 1487090 R DNA polymerase III alpha chain complement(1483935..1487090) Macrococcus caseolyticus JCSC5402 7389350 YP_002560773.1 CDS MCCL_1370 NC_011999.1 1487091 1488035 R similar to phosphoesterase; hypothetical protein complement(1487091..1488035) Macrococcus caseolyticus JCSC5402 7390551 YP_002560774.1 CDS MCCL_1371 NC_011999.1 1488102 1488452 D similar to functionally unknown protein; hypothetical protein 1488102..1488452 Macrococcus caseolyticus JCSC5402 7389351 YP_002560775.1 CDS MCCL_1372 NC_011999.1 1488502 1489803 R similar to functionally unknown protein; hypothetical protein complement(1488502..1489803) Macrococcus caseolyticus JCSC5402 7389352 YP_002560776.1 CDS MCCL_1373 NC_011999.1 1489832 1490512 R similar to metallo-beta-lactamase superfamily protein; hypothetical protein complement(1489832..1490512) Macrococcus caseolyticus JCSC5402 7389353 YP_002560777.1 CDS MCCL_1374 NC_011999.1 1490645 1491712 D proline dipeptidase 1490645..1491712 Macrococcus caseolyticus JCSC5402 7389354 YP_002560778.1 CDS MCCL_1375 NC_011999.1 1491709 1492329 D similar to copper homeostasis protein; hypothetical protein 1491709..1492329 Macrococcus caseolyticus JCSC5402 7389355 YP_002560779.1 CDS ald NC_011999.1 1492419 1493534 R alanine dehydrogenase complement(1492419..1493534) Macrococcus caseolyticus JCSC5402 7389356 YP_002560780.1 CDS MCCL_1377 NC_011999.1 1493715 1494215 D similar to universal stress protein UspA; hypothetical protein 1493715..1494215 Macrococcus caseolyticus JCSC5402 7390180 YP_002560781.1 CDS ackA NC_011999.1 1494303 1495499 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1494303..1495499) Macrococcus caseolyticus JCSC5402 7389357 YP_002560782.1 CDS MCCL_1379 NC_011999.1 1495572 1496531 R similar to S-adenosyl-L-methionine-dependent methyltransferase; hypothetical protein complement(1495572..1496531) Macrococcus caseolyticus JCSC5402 7390175 YP_002560783.1 CDS MCCL_1380 NC_011999.1 1496554 1497051 R thiol peroxidase complement(1496554..1497051) Macrococcus caseolyticus JCSC5402 7389358 YP_002560784.1 CDS MCCL_1381 NC_011999.1 1497125 1497697 R similar to functionally unknown protein; hypothetical protein complement(1497125..1497697) Macrococcus caseolyticus JCSC5402 7389359 YP_002560785.1 CDS MCCL_1382 NC_011999.1 1497698 1498699 R similar to signal peptide peptidase; hypothetical protein complement(1497698..1498699) Macrococcus caseolyticus JCSC5402 7389360 YP_002560786.1 CDS ppnK NC_011999.1 1498788 1499594 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1498788..1499594 Macrococcus caseolyticus JCSC5402 7389361 YP_002560787.1 CDS MCCL_1384 NC_011999.1 1499666 1500436 R similar to functionally unknown protein; hypothetical protein complement(1499666..1500436) Macrococcus caseolyticus JCSC5402 7389362 YP_002560788.1 CDS MCCL_1385 NC_011999.1 1500489 1501292 R similar to glycerophosphoryl diester phosphodiesterase; hypothetical protein complement(1500489..1501292) Macrococcus caseolyticus JCSC5402 7389363 YP_002560789.1 CDS MCCL_1386 NC_011999.1 1501304 1502512 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(1501304..1502512) Macrococcus caseolyticus JCSC5402 7389364 YP_002560790.1 CDS MCCL_1387 NC_011999.1 1502502 1503641 R similar to aminotransferase, class V; hypothetical protein complement(1502502..1503641) Macrococcus caseolyticus JCSC5402 7389365 YP_002560791.1 CDS MCCL_1388 NC_011999.1 1503719 1505419 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(1503719..1505419) Macrococcus caseolyticus JCSC5402 7389366 YP_002560792.1 CDS MCCL_1389 NC_011999.1 1505561 1506028 D similar to functionally unknown protein; hypothetical protein 1505561..1506028 Macrococcus caseolyticus JCSC5402 7389367 YP_002560793.1 CDS rpsD NC_011999.1 1506243 1506845 D 30S ribosomal protein S4 1506243..1506845 Macrococcus caseolyticus JCSC5402 7389368 YP_002560794.1 CDS MCCL_1391 NC_011999.1 1506955 1507401 D similar to functionally unknown protein; hypothetical protein 1506955..1507401 Macrococcus caseolyticus JCSC5402 7389550 YP_002560795.1 CDS MCCL_1392 NC_011999.1 1507704 1509014 D proton/sodium-glutamate symport protein 1507704..1509014 Macrococcus caseolyticus JCSC5402 7389369 YP_002560796.1 CDS tnp NC_011999.1 1509037 1509906 R transposase complement(1509037..1509906) Macrococcus caseolyticus JCSC5402 7389370 YP_002560797.1 CDS MCCL_1394 NC_011999.1 1510067 1510813 D similar to permeases of the major facilitator superfamily; hypothetical protein 1510067..1510813 Macrococcus caseolyticus JCSC5402 7390475 YP_002560798.1 CDS MCCL_1395 NC_011999.1 1510836 1512356 D similar to ABC transporter ATP-binding protein; hypothetical protein 1510836..1512356 Macrococcus caseolyticus JCSC5402 7389371 YP_002560799.1 CDS MCCL_1396 NC_011999.1 1512908 1513231 D no similarity; hypothetical protein 1512908..1513231 Macrococcus caseolyticus JCSC5402 7389372 YP_002560800.1 CDS MCCL_1397 NC_011999.1 1513245 1513811 R integrase family site-specific recombinase complement(1513245..1513811) Macrococcus caseolyticus JCSC5402 7389373 YP_002560801.1 CDS cadX NC_011999.1 1513981 1514316 R cadmium efflux system accessory protein CadX complement(1513981..1514316) Macrococcus caseolyticus JCSC5402 7389374 YP_002560802.1 CDS cadD NC_011999.1 1514336 1514953 R cadmium binding protein CadD complement(1514336..1514953) Macrococcus caseolyticus JCSC5402 7390209 YP_002560803.1 CDS MCCL_1400 NC_011999.1 1515503 1515922 D no similarity; hypothetical protein 1515503..1515922 Macrococcus caseolyticus JCSC5402 7390208 YP_002560804.1 CDS hutH NC_011999.1 1516542 1518044 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(1516542..1518044) Macrococcus caseolyticus JCSC5402 7389375 YP_002560805.1 CDS MCCL_1402 NC_011999.1 1518835 1519431 R similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase; hypothetical protein complement(1518835..1519431) Macrococcus caseolyticus JCSC5402 7391135 YP_002560806.1 CDS MCCL_1403 NC_011999.1 1519501 1520751 D similar to serine protease; hypothetical protein 1519501..1520751 Macrococcus caseolyticus JCSC5402 7389376 YP_002560807.1 CDS MCCL_1404 NC_011999.1 1520823 1521674 R similar to functionally unknown protein; hypothetical protein complement(1520823..1521674) Macrococcus caseolyticus JCSC5402 7389377 YP_002560808.1 CDS MCCL_1405 NC_011999.1 1521674 1522258 R similar to LemA protein; hypothetical protein complement(1521674..1522258) Macrococcus caseolyticus JCSC5402 7389378 YP_002560809.1 CDS tyrS NC_011999.1 1522327 1523580 R tyrosyl-tRNA synthetase complement(1522327..1523580) Macrococcus caseolyticus JCSC5402 7389379 YP_002560810.1 CDS MCCL_1407 NC_011999.1 1523915 1526263 D similar to penicillin-binding protein 1A; hypothetical protein 1523915..1526263 Macrococcus caseolyticus JCSC5402 7390491 YP_002560811.1 CDS MCCL_1408 NC_011999.1 1526349 1528016 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(1526349..1528016) Macrococcus caseolyticus JCSC5402 7389380 YP_002560812.1 CDS acsA NC_011999.1 1528198 1529940 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(1528198..1529940) Macrococcus caseolyticus JCSC5402 7389381 YP_002560813.1 CDS MCCL_1410 NC_011999.1 1530013 1530645 D acetoin utilization protein AcuA 1530013..1530645 Macrococcus caseolyticus JCSC5402 7390176 YP_002560814.1 CDS MCCL_1411 NC_011999.1 1530657 1531295 D similar to acetoin utilization protein AcuB; hypothetical protein 1530657..1531295 Macrococcus caseolyticus JCSC5402 7389382 YP_002560815.1 CDS MCCL_1412 NC_011999.1 1531292 1532428 D acetoin utilization protein AcuC 1531292..1532428 Macrococcus caseolyticus JCSC5402 7389383 YP_002560816.1 CDS ccpA NC_011999.1 1532505 1533494 R catabolite control protein A complement(1532505..1533494) Macrococcus caseolyticus JCSC5402 7389384 YP_002560817.1 CDS aroA NC_011999.1 1533586 1534656 R catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(1533586..1534656) Macrococcus caseolyticus JCSC5402 7390510 YP_002560818.1 CDS MCCL_1415 NC_011999.1 1534739 1535242 R similar to functionally unknown protein; hypothetical protein complement(1534739..1535242) Macrococcus caseolyticus JCSC5402 7390191 YP_002560819.1 CDS MCCL_1416 NC_011999.1 1535255 1535785 R similar to general stress protein; hypothetical protein complement(1535255..1535785) Macrococcus caseolyticus JCSC5402 7389385 YP_002560820.1 CDS murC NC_011999.1 1535862 1537157 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1535862..1537157) Macrococcus caseolyticus JCSC5402 7389386 YP_002560821.1 CDS MCCL_1418 NC_011999.1 1537169 1539931 R similar to DNA segregation ATPase FtsK/SpoIIIE family protein; hypothetical protein complement(1537169..1539931) Macrococcus caseolyticus JCSC5402 7390716 YP_002560822.1 CDS MCCL_1419 NC_011999.1 1539941 1540537 R phenylalanyl-tRNA synthetase beta subunit complement(1539941..1540537) Macrococcus caseolyticus JCSC5402 7389387 YP_002560823.1 CDS MCCL_1420 NC_011999.1 1540542 1541402 R similar to functionally unknown protein; hypothetical protein complement(1540542..1541402) Macrococcus caseolyticus JCSC5402 7389388 YP_002560824.1 CDS MCCL_1421 NC_011999.1 1541522 1541830 R similar to thioredoxin family protein; hypothetical protein complement(1541522..1541830) Macrococcus caseolyticus JCSC5402 7389389 YP_002560825.1 CDS MCCL_1422 NC_011999.1 1541827 1542831 R similar to functionally unknown protein; hypothetical protein complement(1541827..1542831) Macrococcus caseolyticus JCSC5402 7389390 YP_002560826.1 CDS MCCL_1423 NC_011999.1 1542992 1543720 R amino acid ABC transporter ATP-binding protein complement(1542992..1543720) Macrococcus caseolyticus JCSC5402 7389391 YP_002560827.1 CDS MCCL_1424 NC_011999.1 1543717 1544445 R amino acid ABC transporter permease complement(1543717..1544445) Macrococcus caseolyticus JCSC5402 7389392 YP_002560828.1 CDS MCCL_1425 NC_011999.1 1544420 1545187 R amino acid ABC transporter substrate-binding protein complement(1544420..1545187) Macrococcus caseolyticus JCSC5402 7389393 YP_002560829.1 CDS MCCL_1426 NC_011999.1 1545283 1546350 R similar to aminopeptidase; hypothetical protein complement(1545283..1546350) Macrococcus caseolyticus JCSC5402 7389394 YP_002560830.1 CDS MCCL_1427 NC_011999.1 1546678 1547868 R similar to aminotransferase; hypothetical protein complement(1546678..1547868) Macrococcus caseolyticus JCSC5402 7389395 YP_002560831.1 CDS trmB NC_011999.1 1547977 1548609 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1547977..1548609) Macrococcus caseolyticus JCSC5402 7389396 YP_002560832.1 CDS MCCL_1429 NC_011999.1 1548622 1549413 R similar to functionally unknown protein; hypothetical protein complement(1548622..1549413) Macrococcus caseolyticus JCSC5402 7389397 YP_002560833.1 CDS MCCL_1430 NC_011999.1 1549575 1550984 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(1549575..1550984) Macrococcus caseolyticus JCSC5402 7389398 YP_002560834.1 CDS MCCL_1431 NC_011999.1 1551073 1551501 R similar to functionally unknown protein; hypothetical protein complement(1551073..1551501) Macrococcus caseolyticus JCSC5402 7389399 YP_002560835.1 CDS MCCL_1432 NC_011999.1 1551565 1552269 R 16S pseudouridylate synthase complement(1551565..1552269) Macrococcus caseolyticus JCSC5402 7389400 YP_002560836.1 CDS MCCL_1433 NC_011999.1 1552266 1553888 R similar to polysaccharide biosynthesis protein; hypothetical protein complement(1552266..1553888) Macrococcus caseolyticus JCSC5402 7389401 YP_002560837.1 CDS MCCL_1434 NC_011999.1 1554025 1555269 D similar to functionally unknown protein; hypothetical protein 1554025..1555269 Macrococcus caseolyticus JCSC5402 7389402 YP_002560838.1 CDS leuS NC_011999.1 1555756 1558164 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1555756..1558164) Macrococcus caseolyticus JCSC5402 7389403 YP_002560839.1 CDS MCCL_1436 NC_011999.1 1558491 1559660 R similar to permease of the major facilitator superfamily; hypothetical protein complement(1558491..1559660) Macrococcus caseolyticus JCSC5402 7391157 YP_002560840.1 CDS MCCL_1437 NC_011999.1 1559745 1560689 D similar to functionally unknown protein; hypothetical protein 1559745..1560689 Macrococcus caseolyticus JCSC5402 7389404 YP_002560841.1 CDS MCCL_1438 NC_011999.1 1560686 1561237 D similar to methyltransferase; hypothetical protein 1560686..1561237 Macrococcus caseolyticus JCSC5402 7389405 YP_002560842.1 CDS MCCL_1439 NC_011999.1 1561257 1561661 R similar to repressor of toxins; hypothetical protein complement(1561257..1561661) Macrococcus caseolyticus JCSC5402 7389406 YP_002560843.1 CDS MCCL_1440 NC_011999.1 1561912 1562511 R similar to lysophospholipase; hypothetical protein complement(1561912..1562511) Macrococcus caseolyticus JCSC5402 7389407 YP_002560844.1 CDS MCCL_1441 NC_011999.1 1562597 1563112 D similar to functionally unknown protein; hypothetical protein 1562597..1563112 Macrococcus caseolyticus JCSC5402 7389408 YP_002560845.1 CDS MCCL_1442 NC_011999.1 1563148 1563483 R similar to functionally unknown protein; hypothetical protein complement(1563148..1563483) Macrococcus caseolyticus JCSC5402 7389409 YP_002560846.1 CDS MCCL_1443 NC_011999.1 1563597 1564265 R similar to NAD(P)H-flavin oxidoreductase; hypothetical protein complement(1563597..1564265) Macrococcus caseolyticus JCSC5402 7389410 YP_002560847.1 CDS MCCL_1444 NC_011999.1 1564390 1564890 R similar to N-acetyltransferase; hypothetical protein complement(1564390..1564890) Macrococcus caseolyticus JCSC5402 7389411 YP_002560848.1 CDS MCCL_1445 NC_011999.1 1564903 1565565 R similar to 2-haloalkanoic acid dehalogenase I; hypothetical protein complement(1564903..1565565) Macrococcus caseolyticus JCSC5402 7389412 YP_002560849.1 CDS tnp NC_011999.1 1566369 1566896 D transposase 1566369..1566896 Macrococcus caseolyticus JCSC5402 7389413 YP_002560850.1 CDS tnp NC_011999.1 1567040 1567771 D transposase 1567040..1567771 Macrococcus caseolyticus JCSC5402 7390476 YP_002560851.1 CDS MCCL_1448 NC_011999.1 1567818 1568555 R similar to nicotinamide mononucleotide transporter; hypothetical protein complement(1567818..1568555) Macrococcus caseolyticus JCSC5402 7390477 YP_002560852.1 CDS MCCL_1449 NC_011999.1 1568566 1569660 R similar to transcriptional regulator; hypothetical protein complement(1568566..1569660) Macrococcus caseolyticus JCSC5402 7389414 YP_002560853.1 CDS MCCL_1450 NC_011999.1 1569955 1570566 R similar to thiamine transporter; hypothetical protein complement(1569955..1570566) Macrococcus caseolyticus JCSC5402 7389415 YP_002560854.1 CDS MCCL_1451 NC_011999.1 1570781 1571773 D similar to proline dehydrogenase; hypothetical protein 1570781..1571773 Macrococcus caseolyticus JCSC5402 7389416 YP_002560855.1 CDS ribH NC_011999.1 1571810 1572274 R 6,7-dimethyl-8-ribityllumazine synthase complement(1571810..1572274) Macrococcus caseolyticus JCSC5402 7389417 YP_002560856.1 CDS MCCL_1453 NC_011999.1 1572271 1573461 R 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II complement(1572271..1573461) Macrococcus caseolyticus JCSC5402 7389509 YP_002560857.1 CDS MCCL_1454 NC_011999.1 1573461 1574084 R similar to riboflavin synthase alpha chain; hypothetical protein complement(1573461..1574084) Macrococcus caseolyticus JCSC5402 7389418 YP_002560858.1 CDS MCCL_1455 NC_011999.1 1574089 1575114 R similar to riboflavin specific deaminase; hypothetical protein complement(1574089..1575114) Macrococcus caseolyticus JCSC5402 7389419 YP_002560859.1 CDS hutI NC_011999.1 1575683 1576930 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(1575683..1576930) Macrococcus caseolyticus JCSC5402 7389420 YP_002560860.1 CDS MCCL_1457 NC_011999.1 1576934 1578598 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(1576934..1578598) Macrococcus caseolyticus JCSC5402 7391136 YP_002560861.1 CDS MCCL_1458 NC_011999.1 1578715 1579602 D similar to LysR family transcriptional regulator; hypothetical protein 1578715..1579602 Macrococcus caseolyticus JCSC5402 7389421 YP_002560862.1 CDS MCCL_1459 NC_011999.1 1579562 1580497 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(1579562..1580497) Macrococcus caseolyticus JCSC5402 7389422 YP_002560863.1 CDS MCCL_1460 NC_011999.1 1580490 1581941 R similar to functionally unknown protein; hypothetical protein complement(1580490..1581941) Macrococcus caseolyticus JCSC5402 7389423 YP_002560864.1 CDS opuCA NC_011999.1 1582057 1583187 D glycine/betaine ABC transporter ATP-binding protein 1582057..1583187 Macrococcus caseolyticus JCSC5402 7389424 YP_002560865.1 CDS opuCB NC_011999.1 1583189 1583833 D glycine/betaine ABC transporter permease 1583189..1583833 Macrococcus caseolyticus JCSC5402 7390746 YP_002560866.1 CDS opuCC NC_011999.1 1583834 1584733 D glycine/betaine ABC transporter substrate-binding protein 1583834..1584733 Macrococcus caseolyticus JCSC5402 7390747 YP_002560867.1 CDS opuCD NC_011999.1 1584733 1585425 D glycine/betaine ABC transporter permease 1584733..1585425 Macrococcus caseolyticus JCSC5402 7390748 YP_002560868.1 CDS MCCL_1465 NC_011999.1 1585489 1586349 D similar to functionally unknown protein; hypothetical protein 1585489..1586349 Macrococcus caseolyticus JCSC5402 7390749 YP_002560869.1 CDS MCCL_1466 NC_011999.1 1586378 1587205 R similar to glucosaminidase; hypothetical protein complement(1586378..1587205) Macrococcus caseolyticus JCSC5402 7389425 YP_002560870.1 CDS MCCL_1467 NC_011999.1 1587574 1588107 D similar to acetyltransferase, GNAT family; hypothetical protein 1587574..1588107 Macrococcus caseolyticus JCSC5402 7389426 YP_002560871.1 CDS MCCL_1468 NC_011999.1 1588156 1588953 R similar to endonuclease; hypothetical protein complement(1588156..1588953) Macrococcus caseolyticus JCSC5402 7389427 YP_002560872.1 CDS MCCL_1469 NC_011999.1 1590151 1591464 R similar to 2-oxo acid dehydrogenase, lipoyl-binding site protein; hypothetical protein complement(1590151..1591464) Macrococcus caseolyticus JCSC5402 7389428 YP_002560873.1 CDS MCCL_1470 NC_011999.1 1591496 1591891 R similar to transcriptional regulator, MerR family; hypothetical protein complement(1591496..1591891) Macrococcus caseolyticus JCSC5402 7389429 YP_002560874.1 CDS adhC NC_011999.1 1592136 1593287 R glutathione-dependent formaldehyde dehydrogenase; alcohol dehydrogenase complement(1592136..1593287) Macrococcus caseolyticus JCSC5402 7389430 YP_002560875.1 CDS MCCL_1472 NC_011999.1 1594426 1595007 D similar to transcriptional regulator, TetR family; hypothetical protein 1594426..1595007 Macrococcus caseolyticus JCSC5402 7390177 YP_002560876.1 CDS MCCL_1473 NC_011999.1 1594995 1595555 D similar to functionally unknown protein; hypothetical protein 1594995..1595555 Macrococcus caseolyticus JCSC5402 7389431 YP_002560877.1 CDS MCCL_1474 NC_011999.1 1596050 1596484 D similar to small heat shock protein; hypothetical protein 1596050..1596484 Macrococcus caseolyticus JCSC5402 7389432 YP_002560878.1 CDS MCCL_1475 NC_011999.1 1597474 1597980 R similar to functionally unknown protein; hypothetical protein complement(1597474..1597980) Macrococcus caseolyticus JCSC5402 7389433 YP_002560879.1 CDS MCCL_1476 NC_011999.1 1598016 1598543 R similar to DNA mismatch endonuclease patch repair protein; hypothetical protein complement(1598016..1598543) Macrococcus caseolyticus JCSC5402 7389434 YP_002560880.1 CDS hsdM NC_011999.1 1598602 1599843 D type II modification methyltransferase 1598602..1599843 Macrococcus caseolyticus JCSC5402 7389435 YP_002560881.1 CDS MCCL_1478 NC_011999.1 1599921 1600598 D similar to functionally unknown protein; hypothetical protein 1599921..1600598 Macrococcus caseolyticus JCSC5402 7391130 YP_002560882.1 CDS hsdR NC_011999.1 1600582 1601970 D type II restriction enzyme 1600582..1601970 Macrococcus caseolyticus JCSC5402 7389436 YP_002560883.1 CDS MCCL_1480 NC_011999.1 1602062 1602967 D no similarity; hypothetical protein 1602062..1602967 Macrococcus caseolyticus JCSC5402 7391132 YP_002560884.1 CDS MCCL_1481 NC_011999.1 1602987 1604102 R no similarity; hypothetical protein complement(1602987..1604102) Macrococcus caseolyticus JCSC5402 7389437 YP_002560885.1 CDS MCCL_1482 NC_011999.1 1604135 1604980 D similar to functionally unknown protein; hypothetical protein 1604135..1604980 Macrococcus caseolyticus JCSC5402 7389438 YP_002560886.1 CDS MCCL_1483 NC_011999.1 1605641 1606828 R similar to acetamidase/formamidase; hypothetical protein complement(1605641..1606828) Macrococcus caseolyticus JCSC5402 7389439 YP_002560887.1 CDS arsR NC_011999.1 1607027 1607344 D arsenical resistance operon repressor 1607027..1607344 Macrococcus caseolyticus JCSC5402 7389440 YP_002560888.1 CDS arsB NC_011999.1 1607341 1608633 D arsenic efflux pump protein 1607341..1608633 Macrococcus caseolyticus JCSC5402 7390196 YP_002560889.1 CDS arsC NC_011999.1 1608651 1609046 D catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates; arsenate reductase 1608651..1609046 Macrococcus caseolyticus JCSC5402 7390194 YP_002560890.1 CDS MCCL_1487 NC_011999.1 1609105 1610313 R similar to transporter; hypothetical protein complement(1609105..1610313) Macrococcus caseolyticus JCSC5402 7390195 YP_002560891.1 CDS MCCL_1488 NC_011999.1 1610335 1611087 R similar to LamB/YcsF protein; hypothetical protein complement(1610335..1611087) Macrococcus caseolyticus JCSC5402 7389441 YP_002560892.1 CDS MCCL_1489 NC_011999.1 1611089 1612438 R acetyl-CoA carboxylase, biotin carboxylase subunit complement(1611089..1612438) Macrococcus caseolyticus JCSC5402 7389442 YP_002560893.1 CDS MCCL_1490 NC_011999.1 1612451 1612882 R similar to biotin carboxyl carrier protein of acetyl-CoA carboxylase; hypothetical protein complement(1612451..1612882) Macrococcus caseolyticus JCSC5402 7389443 YP_002560894.1 CDS MCCL_1491 NC_011999.1 1612884 1613852 R similar to allophanate hydrolase subunit 2; hypothetical protein complement(1612884..1613852) Macrococcus caseolyticus JCSC5402 7389444 YP_002560895.1 CDS MCCL_1492 NC_011999.1 1613852 1614562 R similar to allophanate hydrolase subunit 1; hypothetical protein complement(1613852..1614562) Macrococcus caseolyticus JCSC5402 7389445 YP_002560896.1 CDS MCCL_1493 NC_011999.1 1614774 1618304 R similar to subtilisin-like serine protease; hypothetical protein complement(1614774..1618304) Macrococcus caseolyticus JCSC5402 7389446 YP_002560897.1 CDS MCCL_1494 NC_011999.1 1618698 1619408 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(1618698..1619408) Macrococcus caseolyticus JCSC5402 7389447 YP_002560898.1 CDS MCCL_1495 NC_011999.1 1619878 1620213 D similar to camphor resistance protein CrcB; hypothetical protein 1619878..1620213 Macrococcus caseolyticus JCSC5402 7389448 YP_002560899.1 CDS MCCL_1496 NC_011999.1 1620210 1620542 D similar to camphor resistance protein CrcB; hypothetical protein 1620210..1620542 Macrococcus caseolyticus JCSC5402 7389449 YP_002560900.1 CDS MCCL_1497 NC_011999.1 1620687 1621721 R similar to functionally unknown protein; hypothetical protein complement(1620687..1621721) Macrococcus caseolyticus JCSC5402 7389450 YP_002560901.1 CDS metK NC_011999.1 1622031 1623221 R S-adenosylmethionine synthetase complement(1622031..1623221) Macrococcus caseolyticus JCSC5402 7389451 YP_002560902.1 CDS pckA NC_011999.1 1623528 1625201 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1623528..1625201 Macrococcus caseolyticus JCSC5402 7390683 YP_002560903.1 CDS MCCL_1500 NC_011999.1 1625251 1626021 R similar to peptidase; hypothetical protein complement(1625251..1626021) Macrococcus caseolyticus JCSC5402 7389805 YP_002560904.1 CDS MCCL_1501 NC_011999.1 1625987 1626466 R similar to MutT/nudix family protein; hypothetical protein complement(1625987..1626466) Macrococcus caseolyticus JCSC5402 7389452 YP_002560905.1 CDS MCCL_1502 NC_011999.1 1626501 1627262 D no similarity; hypothetical protein 1626501..1627262 Macrococcus caseolyticus JCSC5402 7389453 YP_002560906.1 CDS MCCL_1503 NC_011999.1 1627532 1628494 R similar to O-succinylbenzoic acid synthetase; hypothetical protein complement(1627532..1628494) Macrococcus caseolyticus JCSC5402 7389454 YP_002560907.1 CDS MCCL_1504 NC_011999.1 1628478 1629869 R O-succinylbenzoic acid-CoA ligase complement(1628478..1629869) Macrococcus caseolyticus JCSC5402 7389455 YP_002560908.1 CDS menB NC_011999.1 1630031 1630849 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(1630031..1630849) Macrococcus caseolyticus JCSC5402 7389456 YP_002560909.1 CDS MCCL_1506 NC_011999.1 1630842 1631630 R similar to hydrolase; hypothetical protein complement(1630842..1631630) Macrococcus caseolyticus JCSC5402 7390679 YP_002560910.1 CDS menD NC_011999.1 1631617 1633269 R 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase and 2-oxoglutarate decarboxylase; menaquinone biosynthesis bifunctional protein complement(1631617..1633269) Macrococcus caseolyticus JCSC5402 7389457 YP_002560911.1 CDS MCCL_1508 NC_011999.1 1633262 1634545 R similar to menaquinone-specific isochorismate synthase; hypothetical protein complement(1633262..1634545) Macrococcus caseolyticus JCSC5402 7390680 YP_002560912.1 CDS menA NC_011999.1 1634679 1635599 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1634679..1635599 Macrococcus caseolyticus JCSC5402 7389458 YP_002560913.1 CDS MCCL_1510 NC_011999.1 1635949 1636419 R no similarity; hypothetical protein complement(1635949..1636419) Macrococcus caseolyticus JCSC5402 7390678 YP_002560914.1 CDS MCCL_1511 NC_011999.1 1637653 1638465 R similar to phage-related amidase; hypothetical protein complement(1637653..1638465) Macrococcus caseolyticus JCSC5402 7390141 YP_002560915.1 CDS MCCL_1512 NC_011999.1 1638469 1638771 R similar to phage holin; hypothetical protein complement(1638469..1638771) Macrococcus caseolyticus JCSC5402 7389460 YP_002560916.1 CDS MCCL_1513 NC_011999.1 1638791 1639252 R no similarity; hypothetical protein complement(1638791..1639252) Macrococcus caseolyticus JCSC5402 7389461 YP_002560917.1 CDS MCCL_1514 NC_011999.1 1639787 1644463 R similar to phage-related protein; hypothetical protein complement(1639787..1644463) Macrococcus caseolyticus JCSC5402 7389462 YP_002560918.1 CDS MCCL_1515 NC_011999.1 1644479 1645489 R similar to phage-related protein; hypothetical protein complement(1644479..1645489) Macrococcus caseolyticus JCSC5402 7389463 YP_002560919.1 CDS MCCL_1516 NC_011999.1 1645568 1646008 R similar to phage-related protein; hypothetical protein complement(1645568..1646008) Macrococcus caseolyticus JCSC5402 7389464 YP_002560920.1 CDS MCCL_1517 NC_011999.1 1646009 1650370 R similar to phage tail fiber protein; hypothetical protein complement(1646009..1650370) Macrococcus caseolyticus JCSC5402 7389465 YP_002560921.1 CDS MCCL_1518 NC_011999.1 1650604 1650957 R similar to phage-related protein; hypothetical protein complement(1650604..1650957) Macrococcus caseolyticus JCSC5402 7389466 YP_002560922.1 CDS MCCL_1519 NC_011999.1 1651028 1651615 R similar to phage major tail protein; hypothetical protein complement(1651028..1651615) Macrococcus caseolyticus JCSC5402 7389467 YP_002560923.1 CDS MCCL_1520 NC_011999.1 1651628 1652017 R similar to phage-related protein; hypothetical protein complement(1651628..1652017) Macrococcus caseolyticus JCSC5402 7389468 YP_002560924.1 CDS MCCL_1521 NC_011999.1 1652014 1652406 R similar to phage-related protein; hypothetical protein complement(1652014..1652406) Macrococcus caseolyticus JCSC5402 7389469 YP_002560925.1 CDS MCCL_1522 NC_011999.1 1652403 1652726 R similar to phage head-tail adaptor; hypothetical protein complement(1652403..1652726) Macrococcus caseolyticus JCSC5402 7389470 YP_002560926.1 CDS MCCL_1523 NC_011999.1 1652695 1653039 R similar to phage DNA packaging protein; hypothetical protein complement(1652695..1653039) Macrococcus caseolyticus JCSC5402 7389471 YP_002560927.1 CDS MCCL_1524 NC_011999.1 1653232 1654365 R similar to phage capsid protein; hypothetical protein complement(1653232..1654365) Macrococcus caseolyticus JCSC5402 7389472 YP_002560928.1 CDS MCCL_1525 NC_011999.1 1654375 1654953 R similar to phage prohead protease; hypothetical protein complement(1654375..1654953) Macrococcus caseolyticus JCSC5402 7389473 YP_002560929.1 CDS MCCL_1526 NC_011999.1 1654928 1656169 R similar to phage portal protein; hypothetical protein complement(1654928..1656169) Macrococcus caseolyticus JCSC5402 7389474 YP_002560930.1 CDS MCCL_1527 NC_011999.1 1656343 1658049 R similar to phage terminase large subunit; hypothetical protein complement(1656343..1658049) Macrococcus caseolyticus JCSC5402 7389475 YP_002560931.1 CDS MCCL_1528 NC_011999.1 1658046 1658531 R similar to phage terminase small subunit; hypothetical protein complement(1658046..1658531) Macrococcus caseolyticus JCSC5402 7389476 YP_002560932.1 CDS MCCL_1529 NC_011999.1 1658663 1659067 R similar to phage endonuclease; hypothetical protein complement(1658663..1659067) Macrococcus caseolyticus JCSC5402 7389477 YP_002560933.1 CDS MCCL_1530 NC_011999.1 1659199 1659615 R similar to phage-related protein; hypothetical protein complement(1659199..1659615) Macrococcus caseolyticus JCSC5402 7389478 YP_002560934.1 CDS MCCL_1531 NC_011999.1 1660295 1660657 R no similarity; hypothetical protein complement(1660295..1660657) Macrococcus caseolyticus JCSC5402 7389479 YP_002560935.1 CDS MCCL_1532 NC_011999.1 1660650 1661084 R similar to functionally unknown protein; hypothetical protein complement(1660650..1661084) Macrococcus caseolyticus JCSC5402 7389480 YP_002560936.1 CDS MCCL_1533 NC_011999.1 1661263 1661571 R similar to methylase of type III restriction-modification system; hypothetical protein complement(1661263..1661571) Macrococcus caseolyticus JCSC5402 7389481 YP_002560937.1 CDS MCCL_1534 NC_011999.1 1661722 1662087 R similar to phage-related protein; hypothetical protein complement(1661722..1662087) Macrococcus caseolyticus JCSC5402 7389482 YP_002560940.1 CDS MCCL_1537 NC_011999.1 1663368 1663859 R single-strand DNA-binding protein complement(1663368..1663859) Macrococcus caseolyticus JCSC5402 7389483 YP_002560941.1 CDS MCCL_1538 NC_011999.1 1663840 1664172 R no similarity; hypothetical protein complement(1663840..1664172) Macrococcus caseolyticus JCSC5402 7389484 YP_002560942.1 CDS MCCL_1539 NC_011999.1 1664508 1664849 R no similarity; hypothetical protein complement(1664508..1664849) Macrococcus caseolyticus JCSC5402 7389485 YP_002560943.1 CDS MCCL_1540 NC_011999.1 1664803 1665759 R similar to primosome component and related proteins; hypothetical protein complement(1664803..1665759) Macrococcus caseolyticus JCSC5402 7389486 YP_002560944.1 CDS MCCL_1541 NC_011999.1 1666046 1666819 R anti-repressor complement(1666046..1666819) Macrococcus caseolyticus JCSC5402 7389487 YP_002560945.1 CDS MCCL_1542 NC_011999.1 1667079 1667387 R similar to phage-related protein; hypothetical protein complement(1667079..1667387) Macrococcus caseolyticus JCSC5402 7389488 YP_002560946.1 CDS MCCL_1543 NC_011999.1 1667769 1668398 D similar to phage-related protein; hypothetical protein 1667769..1668398 Macrococcus caseolyticus JCSC5402 7389489 YP_002560947.1 CDS MCCL_1544 NC_011999.1 1668467 1669321 D no similarity; hypothetical protein 1668467..1669321 Macrococcus caseolyticus JCSC5402 7389490 YP_002560948.1 CDS int NC_011999.1 1669433 1670491 D integrase 1669433..1670491 Macrococcus caseolyticus JCSC5402 7389491 YP_002560949.1 CDS MCCL_1546 NC_011999.1 1670906 1671454 R similar to competence transcription factor; hypothetical protein complement(1670906..1671454) Macrococcus caseolyticus JCSC5402 7390143 YP_002560950.1 CDS lplA NC_011999.1 1671981 1672970 R lipoate-protein ligase A complement(1671981..1672970) Macrococcus caseolyticus JCSC5402 7389492 YP_002560951.1 CDS hemY NC_011999.1 1672983 1674350 R catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase complement(1672983..1674350) Macrococcus caseolyticus JCSC5402 7390670 YP_002560952.1 CDS hemH NC_011999.1 1674368 1675288 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(1674368..1675288) Macrococcus caseolyticus JCSC5402 7391120 YP_002560953.1 CDS hemE NC_011999.1 1675303 1676277 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1675303..1676277) Macrococcus caseolyticus JCSC5402 7391118 YP_002560954.1 CDS MCCL_1551 NC_011999.1 1676484 1676978 D similar to signal transduction protein; hypothetical protein 1676484..1676978 Macrococcus caseolyticus JCSC5402 7391117 YP_002560955.1 CDS MCCL_1552 NC_011999.1 1677042 1678151 R similar to transporter protein; hypothetical protein complement(1677042..1678151) Macrococcus caseolyticus JCSC5402 7389493 YP_002560956.1 CDS MCCL_1553 NC_011999.1 1678246 1678986 R ABC transporter ATP-binding protein complement(1678246..1678986) Macrococcus caseolyticus JCSC5402 7389494 YP_002560957.1 CDS MCCL_1554 NC_011999.1 1679114 1679530 D HIT-family protein 1679114..1679530 Macrococcus caseolyticus JCSC5402 7389495 YP_002560958.1 CDS MCCL_1555 NC_011999.1 1679592 1679948 D similar to functionally unknown protein; hypothetical protein 1679592..1679948 Macrococcus caseolyticus JCSC5402 7389496 YP_002560959.1 CDS MCCL_1556 NC_011999.1 1680023 1680673 D hpr; ScoC; MarR family; protease production regulatory protein; transcriptional regulator Hpr 1680023..1680673 Macrococcus caseolyticus JCSC5402 7389497 YP_002560960.1 CDS MCCL_1557 NC_011999.1 1680708 1681283 D similar to functionally unknown protein; hypothetical protein 1680708..1681283 Macrococcus caseolyticus JCSC5402 7389498 YP_002560961.1 CDS MCCL_1558 NC_011999.1 1681365 1682276 D peptidyl-prolyl cis/trans-isomerase PrsA 1681365..1682276 Macrococcus caseolyticus JCSC5402 7389499 YP_002560962.1 CDS MCCL_1559 NC_011999.1 1682310 1683251 R catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM complement(1682310..1683251) Macrococcus caseolyticus JCSC5402 7389500 YP_002560963.1 CDS MCCL_1560 NC_011999.1 1683252 1686182 R similar to functionally unknown protein; hypothetical protein complement(1683252..1686182) Macrococcus caseolyticus JCSC5402 7389501 YP_002560964.1 CDS MCCL_1561 NC_011999.1 1686163 1687359 R similar to functionally unknown protein; hypothetical protein complement(1686163..1687359) Macrococcus caseolyticus JCSC5402 7389502 YP_002560965.1 CDS hemZ NC_011999.1 1687508 1688977 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1687508..1688977) Macrococcus caseolyticus JCSC5402 7389503 YP_002560966.1 CDS MCCL_1563 NC_011999.1 1689068 1689430 R similar to functionally unknown protein; hypothetical protein complement(1689068..1689430) Macrococcus caseolyticus JCSC5402 7391121 YP_002560967.1 CDS MCCL_1564 NC_011999.1 1689479 1690564 R similar to functionally unknown protein; hypothetical protein complement(1689479..1690564) Macrococcus caseolyticus JCSC5402 7390588 YP_002560968.1 CDS MCCL_1565 NC_011999.1 1690742 1691206 R similar to DNA-binding protein; hypothetical protein complement(1690742..1691206) Macrococcus caseolyticus JCSC5402 7389720 YP_002560969.1 CDS MCCL_1567 NC_011999.1 1691382 1692677 R proton glutamate symporter complement(1691382..1692677) Macrococcus caseolyticus JCSC5402 7389721 YP_002560971.1 CDS MCCL_1568 NC_011999.1 1692847 1693728 D cation efflux protein 1692847..1693728 Macrococcus caseolyticus JCSC5402 7389722 YP_002560973.1 CDS MCCL_1570 NC_011999.1 1693853 1694485 R two-component response regulator complement(1693853..1694485) Macrococcus caseolyticus JCSC5402 7389723 YP_002560974.1 CDS MCCL_1571 NC_011999.1 1694482 1695591 R signal transduction histidine kinase complement(1694482..1695591) Macrococcus caseolyticus JCSC5402 7389724 YP_002560975.1 CDS MCCL_1572 NC_011999.1 1695597 1697135 R nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase complement(1695597..1697135) Macrococcus caseolyticus JCSC5402 7389725 YP_002560976.1 CDS MCCL_1573 NC_011999.1 1697244 1698065 D ribosomal large subunit pseudouridine synthase 1697244..1698065 Macrococcus caseolyticus JCSC5402 7389726 YP_002560977.1 CDS MCCL_1574 NC_011999.1 1698092 1698739 D similar to nitroreductase; hypothetical protein 1698092..1698739 Macrococcus caseolyticus JCSC5402 7389727 YP_002560978.1 CDS ppk NC_011999.1 1698831 1701014 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1698831..1701014) Macrococcus caseolyticus JCSC5402 7389728 YP_002560979.1 CDS MCCL_1576 NC_011999.1 1701041 1702573 R exopolyphosphatase complement(1701041..1702573) Macrococcus caseolyticus JCSC5402 7389834 YP_002560980.1 CDS fumC NC_011999.1 1702594 1703979 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1702594..1703979) Macrococcus caseolyticus JCSC5402 7389729 YP_002560981.1 CDS MCCL_1578 NC_011999.1 1704310 1705200 D similar to functionally unknown protein; hypothetical protein 1704310..1705200 Macrococcus caseolyticus JCSC5402 7390582 YP_002560982.1 CDS MCCL_1579 NC_011999.1 1705408 1706019 R similar to a membrane protein; hypothetical protein complement(1705408..1706019) Macrococcus caseolyticus JCSC5402 7389730 YP_002560983.1 CDS MCCL_1580 NC_011999.1 1706321 1707055 R nitro/flavin reductase complement(1706321..1707055) Macrococcus caseolyticus JCSC5402 7389731 YP_002560984.1 CDS MCCL_1581 NC_011999.1 1707070 1707543 R SpoU rRNA methylase family protein complement(1707070..1707543) Macrococcus caseolyticus JCSC5402 7389732 YP_002560985.1 CDS MCCL_1582 NC_011999.1 1707544 1708665 R similar to iron-sulfur cluster-binding protein; hypothetical protein complement(1707544..1708665) Macrococcus caseolyticus JCSC5402 7389733 YP_002560986.1 CDS MCCL_1583 NC_011999.1 1708725 1709447 R amino acid ABC transporter ATP-binding protein complement(1708725..1709447) Macrococcus caseolyticus JCSC5402 7389734 YP_002560987.1 CDS MCCL_1584 NC_011999.1 1709440 1710891 R glutamine-binding periplasmic protein complement(1709440..1710891) Macrococcus caseolyticus JCSC5402 7389735 YP_002560988.1 CDS MCCL_1585 NC_011999.1 1711050 1712216 D similar to aromatic amino acid aminotransferase; hypothetical protein 1711050..1712216 Macrococcus caseolyticus JCSC5402 7389736 YP_002560989.1 CDS MCCL_1586 NC_011999.1 1712309 1713355 R similar to functionally unknown protein; hypothetical protein complement(1712309..1713355) Macrococcus caseolyticus JCSC5402 7389737 YP_002560990.1 CDS MCCL_1587 NC_011999.1 1713683 1714237 D ATP-dependent Clp protease proteolytic subunit 1713683..1714237 Macrococcus caseolyticus JCSC5402 7389738 YP_002560991.1 CDS MCCL_1588 NC_011999.1 1714325 1715575 R similar to permease; hypothetical protein complement(1714325..1715575) Macrococcus caseolyticus JCSC5402 7389739 YP_002560992.1 CDS MCCL_1589 NC_011999.1 1715676 1716923 D similar to transcriptional regulator; hypothetical protein 1715676..1716923 Macrococcus caseolyticus JCSC5402 7389740 YP_002560993.1 CDS MCCL_1590 NC_011999.1 1724606 1725010 D similar to functionally unknown protein; hypothetical protein 1724606..1725010 Macrococcus caseolyticus JCSC5402 7390113 YP_002560994.1 CDS MCCL_1591 NC_011999.1 1725017 1725466 R similar to transcription regulator Fur family protein; hypothetical protein complement(1725017..1725466) Macrococcus caseolyticus JCSC5402 7389742 YP_002560995.1 CDS MCCL_1592 NC_011999.1 1725537 1726484 R similar to D-isomer specific 2-hydroxyacid dehydrogenase; hypothetical protein complement(1725537..1726484) Macrococcus caseolyticus JCSC5402 7389743 YP_002560996.1 CDS MCCL_1593 NC_011999.1 1726484 1726948 R similar to bacterioferritin comigratory protein; hypothetical protein complement(1726484..1726948) Macrococcus caseolyticus JCSC5402 7389744 YP_002560997.1 CDS MCCL_1594 NC_011999.1 1727030 1728316 D converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1727030..1728316 Macrococcus caseolyticus JCSC5402 7389745 YP_002560998.1 CDS MCCL_1595 NC_011999.1 1728379 1729461 D similar to functionally unknown protein; hypothetical protein 1728379..1729461 Macrococcus caseolyticus JCSC5402 7389746 YP_002560999.1 CDS MCCL_1596 NC_011999.1 1729507 1730109 R similar to DNA-3-methyladenine glycosylase; hypothetical protein complement(1729507..1730109) Macrococcus caseolyticus JCSC5402 7389747 YP_002561000.1 CDS MCCL_1597 NC_011999.1 1730251 1731999 R similar to ABC transporter ATP-binding protein; hypothetical protein complement(1730251..1731999) Macrococcus caseolyticus JCSC5402 7389748 YP_002561001.1 CDS MCCL_1598 NC_011999.1 1732122 1732637 R similar to functionally unknown protein; hypothetical protein complement(1732122..1732637) Macrococcus caseolyticus JCSC5402 7389749 YP_002561002.1 CDS MCCL_1599 NC_011999.1 1732739 1733773 R A/G-specific adenine glycosylase complement(1732739..1733773) Macrococcus caseolyticus JCSC5402 7389750 YP_002561003.1 CDS MCCL_1600 NC_011999.1 1733870 1734850 D similar to functionally unknown protein; hypothetical protein 1733870..1734850 Macrococcus caseolyticus JCSC5402 7389751 YP_002561004.1 CDS MCCL_1601 NC_011999.1 1734898 1735692 R similar to teichoic acid translocation permease; hypothetical protein complement(1734898..1735692) Macrococcus caseolyticus JCSC5402 7389752 YP_002561005.1 CDS MCCL_1602 NC_011999.1 1735701 1737230 R similar to teichoic acid translocation ATP-binding protein TagH; hypothetical protein complement(1735701..1737230) Macrococcus caseolyticus JCSC5402 7389753 YP_002561006.1 CDS MCCL_1603 NC_011999.1 1737243 1737533 R similar to functionally unknown protein; hypothetical protein complement(1737243..1737533) Macrococcus caseolyticus JCSC5402 7389754 YP_002561007.1 CDS recX NC_011999.1 1737535 1738347 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(1737535..1738347) Macrococcus caseolyticus JCSC5402 7389755 YP_002561008.1 CDS MCCL_1605 NC_011999.1 1738413 1739120 R monofunctional; catalyzes the elongation of glycan strands in cell wall biosynthesis; glycosyltransferase complement(1738413..1739120) Macrococcus caseolyticus JCSC5402 7389756 YP_002561009.1 CDS MCCL_1606 NC_011999.1 1739317 1739832 R similar to ThiJ/PfpI family protein; hypothetical protein complement(1739317..1739832) Macrococcus caseolyticus JCSC5402 7389757 YP_002561010.1 CDS MCCL_1607 NC_011999.1 1739923 1741302 R tRNA (uracil-5-)-methyltransferase family protein complement(1739923..1741302) Macrococcus caseolyticus JCSC5402 7389758 YP_002561011.1 CDS MCCL_1608 NC_011999.1 1741604 1742731 D similar to functionally unknown protein; hypothetical protein 1741604..1742731 Macrococcus caseolyticus JCSC5402 7389759 YP_002561012.1 CDS MCCL_1609 NC_011999.1 1742824 1743387 R similar to functionally unknown protein; hypothetical protein complement(1742824..1743387) Macrococcus caseolyticus JCSC5402 7389760 YP_002561013.1 CDS MCCL_1610 NC_011999.1 1743661 1744890 R leucyl aminopeptidase complement(1743661..1744890) Macrococcus caseolyticus JCSC5402 7389761 YP_002561014.1 CDS MCCL_1611 NC_011999.1 1745273 1745578 D similar to functionally unknown protein; hypothetical protein 1745273..1745578 Macrococcus caseolyticus JCSC5402 7389762 YP_002561015.1 CDS MCCL_1612 NC_011999.1 1745603 1746631 D similar to functionally unknown protein; hypothetical protein 1745603..1746631 Macrococcus caseolyticus JCSC5402 7389763 YP_002561016.1 CDS MCCL_1613 NC_011999.1 1746651 1747229 D carbonic anhydrase 1746651..1747229 Macrococcus caseolyticus JCSC5402 7389764 YP_002561017.1 CDS vraR NC_011999.1 1747266 1747889 R two-component response regulator VraR complement(1747266..1747889) Macrococcus caseolyticus JCSC5402 7389765 YP_002561018.1 CDS vraS NC_011999.1 1747891 1748910 R two-component sensor histidine kinase VraS complement(1747891..1748910) Macrococcus caseolyticus JCSC5402 7390499 YP_002561019.1 CDS MCCL_1616 NC_011999.1 1748907 1749578 R similar to functionally unknown protein; hypothetical protein complement(1748907..1749578) Macrococcus caseolyticus JCSC5402 7390500 YP_002561020.1 CDS MCCL_1617 NC_011999.1 1749615 1749968 R no similarity; hypothetical protein complement(1749615..1749968) Macrococcus caseolyticus JCSC5402 7389766 YP_002561021.1 CDS MCCL_1618 NC_011999.1 1750062 1750817 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1750062..1750817) Macrococcus caseolyticus JCSC5402 7389767 YP_002561022.1 CDS MCCL_1619 NC_011999.1 1750942 1751931 D similar to functionally unknown protein; hypothetical protein 1750942..1751931 Macrococcus caseolyticus JCSC5402 7389768 YP_002561023.1 CDS MCCL_1620 NC_011999.1 1751986 1752462 D no similarity; hypothetical protein 1751986..1752462 Macrococcus caseolyticus JCSC5402 7389769 YP_002561024.1 CDS MCCL_1621 NC_011999.1 1752445 1753119 R similar to cell division and morphogenesis-related protein; hypothetical protein complement(1752445..1753119) Macrococcus caseolyticus JCSC5402 7389770 YP_002561025.1 CDS MCCL_1622 NC_011999.1 1753326 1754051 R cobyric acid synthase CobQ complement(1753326..1754051) Macrococcus caseolyticus JCSC5402 7389771 YP_002561026.1 CDS MCCL_1623 NC_011999.1 1754048 1755364 R Mur ligase family protein complement(1754048..1755364) Macrococcus caseolyticus JCSC5402 7389772 YP_002561027.1 CDS MCCL_1624 NC_011999.1 1755521 1756021 D ferritin 1755521..1756021 Macrococcus caseolyticus JCSC5402 7389773 YP_002561028.1 CDS MCCL_1625 NC_011999.1 1756413 1758389 D ferrous iron transport protein B 1756413..1758389 Macrococcus caseolyticus JCSC5402 7389774 YP_002561029.1 CDS MCCL_1626 NC_011999.1 1758763 1759668 R similar to functionally unknown protein; hypothetical protein complement(1758763..1759668) Macrococcus caseolyticus JCSC5402 7389775 YP_002561030.1 CDS MCCL_1627 NC_011999.1 1759823 1760716 D similar to exonuclease; hypothetical protein 1759823..1760716 Macrococcus caseolyticus JCSC5402 7389776 YP_002561031.1 CDS MCCL_1628 NC_011999.1 1760963 1762027 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(1760963..1762027) Macrococcus caseolyticus JCSC5402 7389777 YP_002561032.1 CDS MCCL_1629 NC_011999.1 1762192 1763556 R RNA methyltransferase, TrmA family protein complement(1762192..1763556) Macrococcus caseolyticus JCSC5402 7389778 YP_002561033.1 CDS MCCL_1630 NC_011999.1 1763887 1764720 D short-chain dehydrogenase/reductase family protein 1763887..1764720 Macrococcus caseolyticus JCSC5402 7389779 YP_002561034.1 CDS MCCL_1631 NC_011999.1 1764888 1765847 R similar to YegS from E. coli; lipid kinase complement(1764888..1765847) Macrococcus caseolyticus JCSC5402 7389780 YP_002561035.1 CDS MCCL_1632 NC_011999.1 1765859 1767301 R ATPase complement(1765859..1767301) Macrococcus caseolyticus JCSC5402 7389781 YP_002561036.1 CDS MCCL_1633 NC_011999.1 1767401 1767922 R similar to functionally unknown protein; hypothetical protein complement(1767401..1767922) Macrococcus caseolyticus JCSC5402 7389782 YP_002561037.1 CDS MCCL_1634 NC_011999.1 1768148 1768876 D similar to functionally unknown protein; hypothetical protein 1768148..1768876 Macrococcus caseolyticus JCSC5402 7389783 YP_002561038.1 CDS MCCL_1635 NC_011999.1 1768940 1769749 R similar to capsular polysaccharide biosynthesis protein EpsC; hypothetical protein complement(1768940..1769749) Macrococcus caseolyticus JCSC5402 7389784 YP_002561039.1 CDS gatB NC_011999.1 1769807 1771234 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1769807..1771234) Macrococcus caseolyticus JCSC5402 7389785 YP_002561040.1 CDS gatA NC_011999.1 1771248 1772693 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1771248..1772693) Macrococcus caseolyticus JCSC5402 7391078 YP_002561041.1 CDS gatC NC_011999.1 1772695 1772994 R glutamyl-tRNA (Gln) amidotransferase subunit C complement(1772695..1772994) Macrococcus caseolyticus JCSC5402 7390291 YP_002561042.1 CDS MCCL_1639 NC_011999.1 1773172 1774704 D high affinity proline permease 1773172..1774704 Macrococcus caseolyticus JCSC5402 7391079 YP_002561043.1 CDS MCCL_1640 NC_011999.1 1774786 1775952 R similar to staphylococcal sex pheromone; hypothetical protein complement(1774786..1775952) Macrococcus caseolyticus JCSC5402 7389786 YP_002561044.1 CDS MCCL_1641 NC_011999.1 1775965 1777956 R DNA ligase complement(1775965..1777956) Macrococcus caseolyticus JCSC5402 7389787 YP_002561045.1 CDS MCCL_1642 NC_011999.1 1777960 1780125 R ATP-depentend DNA helicase complement(1777960..1780125) Macrococcus caseolyticus JCSC5402 7389788 YP_002561046.1 CDS MCCL_1643 NC_011999.1 1780122 1780808 R PcrB family protein complement(1780122..1780808) Macrococcus caseolyticus JCSC5402 7389789 YP_002561047.1 CDS MCCL_1644 NC_011999.1 1780912 1781562 R similar to D-alanyl-D-alanine carboxypeptidase; hypothetical protein complement(1780912..1781562) Macrococcus caseolyticus JCSC5402 7389790 YP_002561048.1 CDS MCCL_1645 NC_011999.1 1781576 1782235 R similar to D-alanyl-D-alanine carboxypeptidase; hypothetical protein complement(1781576..1782235) Macrococcus caseolyticus JCSC5402 7389791 YP_002561049.1 CDS MCCL_1646 NC_011999.1 1782907 1784202 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1782907..1784202) Macrococcus caseolyticus JCSC5402 7389792 YP_002561050.1 CDS MCCL_1647 NC_011999.1 1784545 1785111 R similar to functionally unknown protein; hypothetical protein complement(1784545..1785111) Macrococcus caseolyticus JCSC5402 7389793 YP_002561051.1 CDS nadE NC_011999.1 1785179 1785997 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(1785179..1785997) Macrococcus caseolyticus JCSC5402 7389794 YP_002561052.1 CDS MCCL_1649 NC_011999.1 1785998 1787455 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1785998..1787455) Macrococcus caseolyticus JCSC5402 7389795 YP_002561053.1 CDS MCCL_1650 NC_011999.1 1787562 1788728 D similar to transriptional regulator; hypothetical protein 1787562..1788728 Macrococcus caseolyticus JCSC5402 7389796 YP_002561054.1 CDS MCCL_1651 NC_011999.1 1788730 1789776 D similar to nitric-oxide synthase; hypothetical protein 1788730..1789776 Macrococcus caseolyticus JCSC5402 7389797 YP_002561055.1 CDS MCCL_1652 NC_011999.1 1789860 1790993 R similar to functionally unknown protein; hypothetical protein complement(1789860..1790993) Macrococcus caseolyticus JCSC5402 7389798 YP_002561056.1 CDS MCCL_1653 NC_011999.1 1791072 1791629 D similar to pyrazinamidase/nicotinamidase; hypothetical protein 1791072..1791629 Macrococcus caseolyticus JCSC5402 7389799 YP_002561057.1 CDS MCCL_1654 NC_011999.1 1791672 1792592 D manganese-dependent inorganic pyrophosphatase 1791672..1792592 Macrococcus caseolyticus JCSC5402 7389800 YP_002561058.1 CDS MCCL_1655 NC_011999.1 1792989 1793945 R similar to oxidoreductase; hypothetical protein complement(1792989..1793945) Macrococcus caseolyticus JCSC5402 7390752 YP_002561059.1 CDS MCCL_1656 NC_011999.1 1794012 1795382 D aldehyde dehydrogenase 1794012..1795382 Macrococcus caseolyticus JCSC5402 7390753 YP_002561060.1 CDS MCCL_1657 NC_011999.1 1795415 1796188 R similar to methylthioribose recycling protein; hypothetical protein complement(1795415..1796188) Macrococcus caseolyticus JCSC5402 7390754 YP_002561061.1 CDS MCCL_1658 NC_011999.1 1796329 1797228 D similar to functionally unknown protein; hypothetical protein 1796329..1797228 Macrococcus caseolyticus JCSC5402 7390755 YP_002561062.1 CDS MCCL_1659 NC_011999.1 1797221 1797544 D no similarity; hypothetical protein 1797221..1797544 Macrococcus caseolyticus JCSC5402 7390756 YP_002561063.1 CDS MCCL_1660 NC_011999.1 1797539 1798558 R similar to functionally unknown protein; hypothetical protein complement(1797539..1798558) Macrococcus caseolyticus JCSC5402 7390757 YP_002561064.1 CDS MCCL_1661 NC_011999.1 1798768 1800276 D similar to lysine decarboxylase; hypothetical protein 1798768..1800276 Macrococcus caseolyticus JCSC5402 7390758 YP_002561065.1 CDS MCCL_1662 NC_011999.1 1800279 1800704 D S-adenosylmethionine decarboxylase 1800279..1800704 Macrococcus caseolyticus JCSC5402 7390759 YP_002561066.1 CDS MCCL_1663 NC_011999.1 1800718 1801578 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1800718..1801578 Macrococcus caseolyticus JCSC5402 7390760 YP_002561067.1 CDS MCCL_1664 NC_011999.1 1801562 1802413 D similar to agmatinase; hypothetical protein 1801562..1802413 Macrococcus caseolyticus JCSC5402 7390761 YP_002561068.1 CDS MCCL_1665 NC_011999.1 1802499 1802930 D similar to functionally unknown protein; hypothetical protein 1802499..1802930 Macrococcus caseolyticus JCSC5402 7390762 YP_002561069.1 CDS MCCL_1666 NC_011999.1 1803109 1804140 D no similarity; hypothetical protein 1803109..1804140 Macrococcus caseolyticus JCSC5402 7390763 YP_002561070.1 CDS MCCL_1667 NC_011999.1 1804119 1804661 R no similarity; hypothetical protein complement(1804119..1804661) Macrococcus caseolyticus JCSC5402 7390764 YP_002561071.1 CDS MCCL_1668 NC_011999.1 1805416 1806450 D similar to functionally unknown protein; hypothetical protein 1805416..1806450 Macrococcus caseolyticus JCSC5402 7390765 YP_002561072.1 CDS MCCL_1669 NC_011999.1 1806772 1807530 R similar to MutT family protein; hypothetical protein complement(1806772..1807530) Macrococcus caseolyticus JCSC5402 7390766 YP_002561073.1 CDS MCCL_1670 NC_011999.1 1807697 1808737 D NADH-dependent flavin oxidoreductase 1807697..1808737 Macrococcus caseolyticus JCSC5402 7390767 YP_002561074.1 CDS MCCL_1671 NC_011999.1 1808899 1810128 R similar to aminopeptidase; hypothetical protein complement(1808899..1810128) Macrococcus caseolyticus JCSC5402 7390768 YP_002561075.1 CDS MCCL_1672 NC_011999.1 1810269 1810751 R similar to functionally unknown protein; hypothetical protein complement(1810269..1810751) Macrococcus caseolyticus JCSC5402 7390769 YP_002561076.1 CDS MCCL_1673 NC_011999.1 1810952 1811446 D similar to functionally unknown protein; hypothetical protein 1810952..1811446 Macrococcus caseolyticus JCSC5402 7390770 YP_002561077.1 CDS MCCL_1674 NC_011999.1 1811554 1811928 D similar to functionally unknown protein; hypothetical protein 1811554..1811928 Macrococcus caseolyticus JCSC5402 7390771 YP_002561078.1 CDS MCCL_1675 NC_011999.1 1812302 1813834 R zinc metalloproteinase aureolysin complement(1812302..1813834) Macrococcus caseolyticus JCSC5402 7390772 YP_002561079.1 CDS MCCL_1676 NC_011999.1 1814195 1815046 D similar to XRE family transcriptional regulator; hypothetical protein 1814195..1815046 Macrococcus caseolyticus JCSC5402 7390773 YP_002561080.1 CDS MCCL_1677 NC_011999.1 1815319 1816434 R similar to monooxygenase family protein; hypothetical protein complement(1815319..1816434) Macrococcus caseolyticus JCSC5402 7390774 YP_002561081.1 CDS MCCL_1678 NC_011999.1 1816425 1816910 R similar to GNAT family acetyltransferase; hypothetical protein complement(1816425..1816910) Macrococcus caseolyticus JCSC5402 7390775 YP_002561082.1 CDS MCCL_1679 NC_011999.1 1817177 1819240 R similar to E1-E2 family cation-transporting ATPase; hypothetical protein complement(1817177..1819240) Macrococcus caseolyticus JCSC5402 7390776 YP_002561083.1 CDS MCCL_1680 NC_011999.1 1819230 1819592 R cadmium-binding protein; cadmium efflux system accessory protein complement(1819230..1819592) Macrococcus caseolyticus JCSC5402 7390777 YP_002561084.1 CDS MCCL_1681 NC_011999.1 1819737 1819967 D no similarity; hypothetical protein 1819737..1819967 Macrococcus caseolyticus JCSC5402 7390778 YP_002561085.1 CDS MCCL_1682 NC_011999.1 1820018 1820662 R similar to serine/threonine phosphatase family protein; hypothetical protein complement(1820018..1820662) Macrococcus caseolyticus JCSC5402 7390779 YP_002561086.1 CDS MCCL_1683 NC_011999.1 1820852 1821175 R no similarity; hypothetical protein complement(1820852..1821175) Macrococcus caseolyticus JCSC5402 7390780 YP_002561087.1 CDS MCCL_1684 NC_011999.1 1821309 1822625 D K+ transporter integral membrane subunit 1821309..1822625 Macrococcus caseolyticus JCSC5402 7390781 YP_002561088.1 CDS MCCL_1685 NC_011999.1 1822860 1823174 R no similarity; hypothetical protein complement(1822860..1823174) Macrococcus caseolyticus JCSC5402 7390782 YP_002561089.1 CDS MCCL_1686 NC_011999.1 1823908 1825308 R similar to dehydrogenase; hypothetical protein complement(1823908..1825308) Macrococcus caseolyticus JCSC5402 7390783 YP_002561090.1 CDS MCCL_1687 NC_011999.1 1825580 1826083 R similar to functionally unknown protein; hypothetical protein complement(1825580..1826083) Macrococcus caseolyticus JCSC5402 7390784 YP_002561091.1 CDS MCCL_1688 NC_011999.1 1826073 1827032 R no similarity; hypothetical protein complement(1826073..1827032) Macrococcus caseolyticus JCSC5402 7390785 YP_002561092.1 CDS MCCL_1689 NC_011999.1 1827172 1828890 R similar to ABC-type multidrug transporter, ATPase and permeases; hypothetical protein complement(1827172..1828890) Macrococcus caseolyticus JCSC5402 7390786 YP_002561093.1 CDS MCCL_1690 NC_011999.1 1829029 1829592 D no similarity; hypothetical protein 1829029..1829592 Macrococcus caseolyticus JCSC5402 7390787 YP_002561094.1 CDS MCCL_1691 NC_011999.1 1829625 1830461 D similar to functionally unknown protein; hypothetical protein 1829625..1830461 Macrococcus caseolyticus JCSC5402 7390788 YP_002561095.1 CDS MCCL_1692 NC_011999.1 1830531 1830953 R similar to functionally unknown protein; hypothetical protein complement(1830531..1830953) Macrococcus caseolyticus JCSC5402 7390789 YP_002561096.1 CDS MCCL_1693 NC_011999.1 1830989 1831522 R no similarity; hypothetical protein complement(1830989..1831522) Macrococcus caseolyticus JCSC5402 7390790 YP_002561097.1 CDS MCCL_1694 NC_011999.1 1831628 1832386 D similar to functionally unknown protein; hypothetical protein 1831628..1832386 Macrococcus caseolyticus JCSC5402 7390791 YP_002561098.1 CDS MCCL_1695 NC_011999.1 1832449 1832727 R no similarity; hypothetical protein complement(1832449..1832727) Macrococcus caseolyticus JCSC5402 7390792 YP_002561099.1 CDS MCCL_1696 NC_011999.1 1833129 1834286 D similar to functionally unknown protein; hypothetical protein 1833129..1834286 Macrococcus caseolyticus JCSC5402 7390793 YP_002561100.1 CDS MCCL_1697 NC_011999.1 1834305 1835525 D similar to aryldialkylphosphatase related protein; hypothetical protein 1834305..1835525 Macrococcus caseolyticus JCSC5402 7390794 YP_002561101.1 CDS MCCL_1698 NC_011999.1 1835655 1836545 R similar to sensory transduction protein kinase; hypothetical protein complement(1835655..1836545) Macrococcus caseolyticus JCSC5402 7390795 YP_002561102.1 CDS MCCL_1699 NC_011999.1 1836560 1837309 R similar to ABC transporter permease; hypothetical protein complement(1836560..1837309) Macrococcus caseolyticus JCSC5402 7390796 YP_002561103.1 CDS MCCL_1700 NC_011999.1 1837306 1838214 R similar to ABC-type multidrug transporter; hypothetical protein complement(1837306..1838214) Macrococcus caseolyticus JCSC5402 7390797 YP_002561104.1 CDS MCCL_1701 NC_011999.1 1838302 1838961 R similar to two-component response regulator; hypothetical protein complement(1838302..1838961) Macrococcus caseolyticus JCSC5402 7390798 YP_002561105.1 CDS MCCL_1702 NC_011999.1 1839077 1839439 R no similarity; hypothetical protein complement(1839077..1839439) Macrococcus caseolyticus JCSC5402 7390799 YP_002561106.1 CDS MCCL_1703 NC_011999.1 1839452 1840183 R similar to functionally unknown protein; hypothetical protein complement(1839452..1840183) Macrococcus caseolyticus JCSC5402 7390800 YP_002561107.1 CDS MCCL_1704 NC_011999.1 1840581 1840934 R similar to functionally unknown protein; hypothetical protein complement(1840581..1840934) Macrococcus caseolyticus JCSC5402 7390801 YP_002561108.1 CDS MCCL_1705 NC_011999.1 1841171 1841728 R protease synthase and sporulation negative regulatory protein pai 1 complement(1841171..1841728) Macrococcus caseolyticus JCSC5402 7390802 YP_002561109.1 CDS MCCL_1706 NC_011999.1 1841962 1842330 D similar to functionally unknown protein; hypothetical protein 1841962..1842330 Macrococcus caseolyticus JCSC5402 7390803 YP_002561110.1 CDS MCCL_1707 NC_011999.1 1842337 1842882 D similar to functionally unknown protein; hypothetical protein 1842337..1842882 Macrococcus caseolyticus JCSC5402 7390804 YP_002561111.1 CDS MCCL_1708 NC_011999.1 1843308 1843802 R similar to functionally unknown protein; hypothetical protein complement(1843308..1843802) Macrococcus caseolyticus JCSC5402 7390805 YP_002561112.1 CDS MCCL_1709 NC_011999.1 1844014 1844628 D lysine efflux permease 1844014..1844628 Macrococcus caseolyticus JCSC5402 7390806 YP_002561113.1 CDS groEL NC_011999.1 1844803 1846422 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(1844803..1846422) Macrococcus caseolyticus JCSC5402 7390807 YP_002561114.1 CDS groES NC_011999.1 1846482 1846766 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(1846482..1846766) Macrococcus caseolyticus JCSC5402 7391109 YP_002561115.1 CDS MCCL_1712 NC_011999.1 1846979 1847734 D similar to functionally unknown protein; hypothetical protein 1846979..1847734 Macrococcus caseolyticus JCSC5402 7391110 YP_002561116.1 CDS MCCL_1713 NC_011999.1 1847949 1849388 R similar to functionally unknown protein; hypothetical protein complement(1847949..1849388) Macrococcus caseolyticus JCSC5402 7390808 YP_002561117.1 CDS MCCL_1714 NC_011999.1 1849522 1850016 D oligoendopeptidase F 1849522..1850016 Macrococcus caseolyticus JCSC5402 7390809 YP_002561118.1 CDS MCCL_1715 NC_011999.1 1850065 1851213 D oligoendopeptidase F 1850065..1851213 Macrococcus caseolyticus JCSC5402 7390810 YP_002561119.1 CDS MCCL_1716 NC_011999.1 1851278 1852141 R no similarity; hypothetical protein complement(1851278..1852141) Macrococcus caseolyticus JCSC5402 7390811 YP_002561120.1 CDS MCCL_1717 NC_011999.1 1852361 1853209 D similar to glyoxalase family protein; hypothetical protein 1852361..1853209 Macrococcus caseolyticus JCSC5402 7390812 YP_002561121.1 CDS MCCL_1718 NC_011999.1 1853363 1854220 R similar to transcriptional regulator; hypothetical protein complement(1853363..1854220) Macrococcus caseolyticus JCSC5402 7390813 YP_002561122.1 CDS MCCL_1719 NC_011999.1 1854361 1855062 R sucrose-6-phosphate hydrolase complement(1854361..1855062) Macrococcus caseolyticus JCSC5402 7390814 YP_002561123.1 CDS MCCL_1720 NC_011999.1 1855131 1855886 R similar to component of the twin-arginine pre-protein translocation pathway protein; hypothetical protein complement(1855131..1855886) Macrococcus caseolyticus JCSC5402 7390815 YP_002561124.1 CDS MCCL_1721 NC_011999.1 1856147 1856788 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(1856147..1856788) Macrococcus caseolyticus JCSC5402 7390816 YP_002561125.1 CDS MCCL_1722 NC_011999.1 1856931 1858850 D ABC transporter ATP-binding protein 1856931..1858850 Macrococcus caseolyticus JCSC5402 7390817 YP_002561126.1 CDS MCCL_1723 NC_011999.1 1859244 1860266 R similar to glycoprotease; hypothetical protein complement(1859244..1860266) Macrococcus caseolyticus JCSC5402 7390818 YP_002561127.1 CDS MCCL_1724 NC_011999.1 1860248 1860703 R similar to acetyltransferase; hypothetical protein complement(1860248..1860703) Macrococcus caseolyticus JCSC5402 7390819 YP_002561128.1 CDS MCCL_1725 NC_011999.1 1860682 1861344 R similar to glycoprotease; hypothetical protein complement(1860682..1861344) Macrococcus caseolyticus JCSC5402 7390820 YP_002561129.1 CDS MCCL_1726 NC_011999.1 1861325 1861786 R similar to functionally unknown protein; hypothetical protein complement(1861325..1861786) Macrococcus caseolyticus JCSC5402 7390821 YP_002561130.1 CDS MCCL_1727 NC_011999.1 1867502 1867942 R similar to functionally unknown protein; hypothetical protein complement(1867502..1867942) Macrococcus caseolyticus JCSC5402 7390168 YP_002561131.1 CDS MCCL_1728 NC_011999.1 1867932 1870112 R S1 RNA binding domain protein complement(1867932..1870112) Macrococcus caseolyticus JCSC5402 7390823 YP_002561132.1 CDS sigB NC_011999.1 1870144 1870911 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB complement(1870144..1870911) Macrococcus caseolyticus JCSC5402 7390824 YP_002561133.1 CDS rsbW NC_011999.1 1870916 1871359 R binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW complement(1870916..1871359) Macrococcus caseolyticus JCSC5402 7389580 YP_002561134.1 CDS rsbV NC_011999.1 1871364 1871687 R anti-sigma B factor antagonist complement(1871364..1871687) Macrococcus caseolyticus JCSC5402 7389564 YP_002561135.1 CDS rsbU NC_011999.1 1871772 1872779 R sigma B regulation protein RsbU complement(1871772..1872779) Macrococcus caseolyticus JCSC5402 7389563 YP_002561136.1 CDS MCCL_1733 NC_011999.1 1872828 1873157 R similar to functionally unknown protein; hypothetical protein complement(1872828..1873157) Macrococcus caseolyticus JCSC5402 7389562 YP_002561137.1 CDS MCCL_1734 NC_011999.1 1873380 1874522 R alanine racemase complement(1873380..1874522) Macrococcus caseolyticus JCSC5402 7390825 YP_002561138.1 CDS MCCL_1735 NC_011999.1 1874548 1874904 R holo-ACP synthase complement(1874548..1874904) Macrococcus caseolyticus JCSC5402 7390826 YP_002561139.1 CDS MCCL_1736 NC_011999.1 1874846 1875367 R similar to functionally unknown protein; hypothetical protein complement(1874846..1875367) Macrococcus caseolyticus JCSC5402 7390827 YP_002561140.1 CDS MCCL_1737 NC_011999.1 1875351 1876862 R similar to functionally unknown protein; hypothetical protein complement(1875351..1876862) Macrococcus caseolyticus JCSC5402 7390828 YP_002561141.1 CDS MCCL_1738 NC_011999.1 1876852 1877334 R similar to functionally unknown protein; hypothetical protein complement(1876852..1877334) Macrococcus caseolyticus JCSC5402 7390829 YP_002561142.1 CDS MCCL_1739 NC_011999.1 1877444 1878940 R similar to ATP-dependent RNA helicase; hypothetical protein complement(1877444..1878940) Macrococcus caseolyticus JCSC5402 7390830 YP_002561143.1 CDS murF NC_011999.1 1879175 1880518 R UDP-N-acetylmuramyl pentapeptide synthase complement(1879175..1880518) Macrococcus caseolyticus JCSC5402 7390831 YP_002561144.1 CDS ddl NC_011999.1 1880518 1881588 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(1880518..1881588) Macrococcus caseolyticus JCSC5402 7390718 YP_002561145.1 CDS MCCL_1742 NC_011999.1 1881759 1882961 D rod shape determining protein RodA 1881759..1882961 Macrococcus caseolyticus JCSC5402 7390539 YP_002561146.1 CDS MCCL_1743 NC_011999.1 1883327 1884805 D similar to cardiolipin synthetase; hypothetical protein 1883327..1884805 Macrococcus caseolyticus JCSC5402 7390832 YP_002561147.1 CDS MCCL_1744 NC_011999.1 1885003 1885641 D similar to hydrolase, HD family; hypothetical protein 1885003..1885641 Macrococcus caseolyticus JCSC5402 7391159 YP_002561148.1 CDS MCCL_1745 NC_011999.1 1885699 1886559 R similar to functionally unknown protein; hypothetical protein complement(1885699..1886559) Macrococcus caseolyticus JCSC5402 7390373 YP_002561149.1 CDS thiE NC_011999.1 1886646 1887281 R thiamine-phosphate pyrophosphorylase complement(1886646..1887281) Macrococcus caseolyticus JCSC5402 7390374 YP_002561150.1 CDS thiM NC_011999.1 1887285 1888070 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(1887285..1888070) Macrococcus caseolyticus JCSC5402 7390466 YP_002561151.1 CDS thiD NC_011999.1 1888070 1888873 R phosphomethylpyrimidine kinase complement(1888070..1888873) Macrococcus caseolyticus JCSC5402 7390468 YP_002561152.1 CDS MCCL_1749 NC_011999.1 1888858 1889526 R similar to trasncriptional activator TenA; hypothetical protein complement(1888858..1889526) Macrococcus caseolyticus JCSC5402 7390463 YP_002561153.1 CDS MCCL_1750 NC_011999.1 1889767 1890582 R no similarity; hypothetical protein complement(1889767..1890582) Macrococcus caseolyticus JCSC5402 7390375 YP_002561154.1 CDS MCCL_1751 NC_011999.1 1890701 1891540 R no similarity; hypothetical protein complement(1890701..1891540) Macrococcus caseolyticus JCSC5402 7390376 YP_002561155.1 CDS MCCL_1752 NC_011999.1 1891786 1892448 R single-strand DNA-binding protein complement(1891786..1892448) Macrococcus caseolyticus JCSC5402 7390377 YP_002561156.1 CDS MCCL_1753 NC_011999.1 1892655 1893086 D similar to functionally unknown protein; hypothetical protein 1892655..1893086 Macrococcus caseolyticus JCSC5402 7390378 YP_002561157.1 CDS fabZ NC_011999.1 1893165 1893602 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1893165..1893602) Macrococcus caseolyticus JCSC5402 7390379 YP_002561158.1 CDS murA NC_011999.1 1893846 1895129 R UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 complement(1893846..1895129) Macrococcus caseolyticus JCSC5402 7390561 YP_002561159.1 CDS atpC NC_011999.1 1895480 1895890 R ATP synthase F1 epsilon subunit complement(1895480..1895890) Macrococcus caseolyticus JCSC5402 7390715 YP_002561160.1 CDS atpD NC_011999.1 1895909 1897324 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1895909..1897324) Macrococcus caseolyticus JCSC5402 7390202 YP_002561161.1 CDS atpG NC_011999.1 1897343 1898209 R ATP synthase gamma subunit complement(1897343..1898209) Macrococcus caseolyticus JCSC5402 7390203 YP_002561162.1 CDS atpA NC_011999.1 1898241 1899752 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1898241..1899752) Macrococcus caseolyticus JCSC5402 7390205 YP_002561163.1 CDS atpH NC_011999.1 1899775 1900308 R ATP synthase delta subunit complement(1899775..1900308) Macrococcus caseolyticus JCSC5402 7390200 YP_002561164.1 CDS atpF NC_011999.1 1900308 1900844 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B complement(1900308..1900844) Macrococcus caseolyticus JCSC5402 7390206 YP_002561165.1 CDS atpB NC_011999.1 1901170 1901892 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(1901170..1901892) Macrococcus caseolyticus JCSC5402 7390204 YP_002561166.1 CDS MCCL_1763 NC_011999.1 1901917 1902270 R similar to ATP synthase protein I; hypothetical protein complement(1901917..1902270) Macrococcus caseolyticus JCSC5402 7390201 YP_002561167.1 CDS mnaA NC_011999.1 1902458 1903600 R UDP-GlcNAc 2-epimerase complement(1902458..1903600) Macrococcus caseolyticus JCSC5402 7390380 YP_002561168.1 CDS upp NC_011999.1 1903615 1904244 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1903615..1904244) Macrococcus caseolyticus JCSC5402 7390688 YP_002561169.1 CDS glyA NC_011999.1 1904266 1905501 R serine hydroxymethyltransferase complement(1904266..1905501) Macrococcus caseolyticus JCSC5402 7390493 YP_002561170.1 CDS MCCL_1767 NC_011999.1 1905511 1906035 R similar to functionally unknown protein; hypothetical protein complement(1905511..1906035) Macrococcus caseolyticus JCSC5402 7391101 YP_002561171.1 CDS MCCL_1768 NC_011999.1 1906028 1906474 R ribose 5-phosphate isomerase complement(1906028..1906474) Macrococcus caseolyticus JCSC5402 7390381 YP_002561172.1 CDS MCCL_1769 NC_011999.1 1906543 1906965 R similar to low molecular weight protein-tyrosine-phosphatase; hypothetical protein complement(1906543..1906965) Macrococcus caseolyticus JCSC5402 7390382 YP_002561173.1 CDS MCCL_1770 NC_011999.1 1906973 1907977 R similar to functionally unknown protein; hypothetical protein complement(1906973..1907977) Macrococcus caseolyticus JCSC5402 7390383 YP_002561174.1 CDS MCCL_1771 NC_011999.1 1908069 1908908 R similar to protoporphyrinogen oxidase; hypothetical protein complement(1908069..1908908) Macrococcus caseolyticus JCSC5402 7390384 YP_002561175.1 CDS prfA NC_011999.1 1908892 1909968 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(1908892..1909968) Macrococcus caseolyticus JCSC5402 7390385 YP_002561176.1 CDS tdk NC_011999.1 1909987 1910562 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(1909987..1910562) Macrococcus caseolyticus JCSC5402 7389836 YP_002561177.1 CDS rpmE2 NC_011999.1 1910665 1910922 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B complement(1910665..1910922) Macrococcus caseolyticus JCSC5402 7390460 YP_002561178.1 CDS rho NC_011999.1 1911036 1912352 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1911036..1912352) Macrococcus caseolyticus JCSC5402 7389539 YP_002561179.1 CDS glpX NC_011999.1 1912575 1913552 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(1912575..1913552) Macrococcus caseolyticus JCSC5402 7389507 YP_002561180.1 CDS MCCL_1777 NC_011999.1 1913667 1914005 R similar to transcriptional regulator; hypothetical protein complement(1913667..1914005) Macrococcus caseolyticus JCSC5402 7390566 YP_002561181.1 CDS murZ NC_011999.1 1914134 1915396 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1914134..1915396) Macrococcus caseolyticus JCSC5402 7390386 YP_002561182.1 CDS fbaA NC_011999.1 1915590 1916447 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase complement(1915590..1916447) Macrococcus caseolyticus JCSC5402 7390721 YP_002561183.1 CDS MCCL_1780 NC_011999.1 1916535 1916885 R no similarity; hypothetical protein complement(1916535..1916885) Macrococcus caseolyticus JCSC5402 7390564 YP_002561184.1 CDS MCCL_1781 NC_011999.1 1916943 1917446 D similar to functionally unknown protein; hypothetical protein 1916943..1917446 Macrococcus caseolyticus JCSC5402 7390387 YP_002561185.1 CDS pyrG NC_011999.1 1917533 1919128 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(1917533..1919128) Macrococcus caseolyticus JCSC5402 7390388 YP_002561186.1 CDS rpoE NC_011999.1 1919271 1919792 R participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta complement(1919271..1919792) Macrococcus caseolyticus JCSC5402 7389865 YP_002561187.1 CDS MCCL_1784 NC_011999.1 1919883 1920698 R spermine/spermidine acetyltransferase blt complement(1919883..1920698) Macrococcus caseolyticus JCSC5402 7389546 YP_002561188.1 CDS MCCL_1785 NC_011999.1 1920840 1921652 D catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A; pantothenate kinase 1920840..1921652 Macrococcus caseolyticus JCSC5402 7390389 YP_002561189.1 CDS MCCL_1786 NC_011999.1 1921759 1922952 R similar to functionally unknown protein; hypothetical protein complement(1921759..1922952) Macrococcus caseolyticus JCSC5402 7390390 YP_002561190.1 CDS hmrA NC_011999.1 1922939 1924135 R HmrA protein complement(1922939..1924135) Macrococcus caseolyticus JCSC5402 7390391 YP_002561191.1 CDS MCCL_1788 NC_011999.1 1924370 1924876 R similar to glutamate-rich protein grpB; hypothetical protein complement(1924370..1924876) Macrococcus caseolyticus JCSC5402 7391126 YP_002561192.1 CDS MCCL_1789 NC_011999.1 1925025 1926545 D no similarity; hypothetical protein 1925025..1926545 Macrococcus caseolyticus JCSC5402 7390392 YP_002561193.1 CDS MCCL_1790 NC_011999.1 1926549 1927694 D cystathionine gamma-synthase 1926549..1927694 Macrococcus caseolyticus JCSC5402 7390393 YP_002561194.1 CDS MCCL_1791 NC_011999.1 1927706 1928191 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1927706..1928191 Macrococcus caseolyticus JCSC5402 7390394 YP_002561195.1 CDS MCCL_1792 NC_011999.1 1928236 1928799 R no similarity; hypothetical protein complement(1928236..1928799) Macrococcus caseolyticus JCSC5402 7390395 YP_002561196.1 CDS MCCL_1793 NC_011999.1 1928961 1929236 D no similarity; hypothetical protein 1928961..1929236 Macrococcus caseolyticus JCSC5402 7390396 YP_002561197.1 CDS drm NC_011999.1 1929287 1930459 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(1929287..1930459) Macrococcus caseolyticus JCSC5402 7390397 YP_002561198.1 CDS pdp NC_011999.1 1930470 1931771 R pyrimidine-nucleoside phosphorylase complement(1930470..1931771) Macrococcus caseolyticus JCSC5402 7390556 YP_002561199.1 CDS deoC NC_011999.1 1931827 1932489 R deoxyribose-phosphate aldolase complement(1931827..1932489) Macrococcus caseolyticus JCSC5402 7389810 YP_002561200.1 CDS MCCL_1797 NC_011999.1 1932570 1933508 R similar to transcriptional regulator; hypothetical protein complement(1932570..1933508) Macrococcus caseolyticus JCSC5402 7390542 YP_002561201.1 CDS MCCL_1798 NC_011999.1 1933583 1934035 R starvation-inducible DNA-binding protein complement(1933583..1934035) Macrococcus caseolyticus JCSC5402 7390398 YP_002561202.1 CDS MCCL_1799 NC_011999.1 1934154 1934834 D no similarity; hypothetical protein 1934154..1934834 Macrococcus caseolyticus JCSC5402 7390399 YP_002561203.1 CDS MCCL_1800 NC_011999.1 1934881 1936146 R similar to permease of the major facilitator superfamily; hypothetical protein complement(1934881..1936146) Macrococcus caseolyticus JCSC5402 7390400 YP_002561204.1 CDS MCCL_1801 NC_011999.1 1936467 1937120 D zinc-dependent dehydrogenase 1936467..1937120 Macrococcus caseolyticus JCSC5402 7390401 YP_002561205.1 CDS MCCL_1802 NC_011999.1 1936987 1937517 D zinc-dependent dehydrogenase 1936987..1937517 Macrococcus caseolyticus JCSC5402 7390402 YP_002561206.1 CDS MCCL_1803 NC_011999.1 1937556 1938050 R similar to universal stress protein UspA and related nucleotide-binding protein ue; hypothetical protein complement(1937556..1938050) Macrococcus caseolyticus JCSC5402 7390403 YP_002561207.1 CDS MCCL_1804 NC_011999.1 1938103 1939062 R similar to functionally unknown protein; hypothetical protein complement(1938103..1939062) Macrococcus caseolyticus JCSC5402 7390404 YP_002561208.1 CDS MCCL_1805 NC_011999.1 1939185 1939799 R similar to functionally unknown protein; hypothetical protein complement(1939185..1939799) Macrococcus caseolyticus JCSC5402 7390405 YP_002561209.1 CDS MCCL_1806 NC_011999.1 1939939 1940373 D no similarity; hypothetical protein 1939939..1940373 Macrococcus caseolyticus JCSC5402 7390406 YP_002561210.1 CDS MCCL_1807 NC_011999.1 1940408 1941853 R Na+/H+ antiporter NnaC complement(1940408..1941853) Macrococcus caseolyticus JCSC5402 7390407 YP_002561211.1 CDS MCCL_1808 NC_011999.1 1942634 1944091 R similar to functionally unknown protein; hypothetical protein complement(1942634..1944091) Macrococcus caseolyticus JCSC5402 7390408 YP_002561212.1 CDS MCCL_1809 NC_011999.1 1944188 1945150 R similar to functionally unknown protein; hypothetical protein complement(1944188..1945150) Macrococcus caseolyticus JCSC5402 7390409 YP_002561213.1 CDS MCCL_1810 NC_011999.1 1945286 1945903 D no similarity; hypothetical protein 1945286..1945903 Macrococcus caseolyticus JCSC5402 7390410 YP_002561214.1 CDS MCCL_1811 NC_011999.1 1946419 1947447 R similar to functionally unknown protein; hypothetical protein complement(1946419..1947447) Macrococcus caseolyticus JCSC5402 7390411 YP_002561215.1 CDS MCCL_1812 NC_011999.1 1947897 1948565 D similar to functionally unknown protein; hypothetical protein 1947897..1948565 Macrococcus caseolyticus JCSC5402 7390412 YP_002561216.1 CDS MCCL_1813 NC_011999.1 1948603 1949355 R no similarity; hypothetical protein complement(1948603..1949355) Macrococcus caseolyticus JCSC5402 7390413 YP_002561217.1 CDS MCCL_1814 NC_011999.1 1950112 1951170 R no similarity; hypothetical protein complement(1950112..1951170) Macrococcus caseolyticus JCSC5402 7390414 YP_002561218.1 CDS MCCL_1815 NC_011999.1 1951406 1953253 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1951406..1953253 Macrococcus caseolyticus JCSC5402 7390415 YP_002561219.1 CDS MCCL_1816 NC_011999.1 1953271 1953732 D similar to anaerobic ribonucleotide reductase activator protein; hypothetical protein 1953271..1953732 Macrococcus caseolyticus JCSC5402 7390416 YP_002561220.1 CDS MCCL_1817 NC_011999.1 1953760 1954491 R similar to functionally unknown protein; hypothetical protein complement(1953760..1954491) Macrococcus caseolyticus JCSC5402 7390417 YP_002561221.1 CDS MCCL_1818 NC_011999.1 1954504 1955280 R similar to hydrolase; hypothetical protein complement(1954504..1955280) Macrococcus caseolyticus JCSC5402 7390418 YP_002561222.1 CDS MCCL_1819 NC_011999.1 1955292 1956005 R similar to functionally unknown protein; hypothetical protein complement(1955292..1956005) Macrococcus caseolyticus JCSC5402 7390419 YP_002561223.1 CDS MCCL_1820 NC_011999.1 1956002 1956625 R no similarity; hypothetical protein complement(1956002..1956625) Macrococcus caseolyticus JCSC5402 7390420 YP_002561224.1 CDS MCCL_1821 NC_011999.1 1956695 1957234 D similar to MutT/nudix family protein; hypothetical protein 1956695..1957234 Macrococcus caseolyticus JCSC5402 7390421 YP_002561225.1 CDS MCCL_1822 NC_011999.1 1957190 1958152 R similar to iron compound ABC transporter permease; hypothetical protein complement(1957190..1958152) Macrococcus caseolyticus JCSC5402 7390422 YP_002561226.1 CDS MCCL_1823 NC_011999.1 1958124 1958969 R similar to iron compound ABC transporter periplasmic component; hypothetical protein complement(1958124..1958969) Macrococcus caseolyticus JCSC5402 7390423 YP_002561227.1 CDS argS NC_011999.1 1959034 1960689 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(1959034..1960689) Macrococcus caseolyticus JCSC5402 7390424 YP_002561228.1 CDS MCCL_1825 NC_011999.1 1960689 1961105 R similar to functionally unknown protein; hypothetical protein complement(1960689..1961105) Macrococcus caseolyticus JCSC5402 7390189 YP_002561229.1 CDS MCCL_1826 NC_011999.1 1961278 1961787 R similar to functionally unknown protein; hypothetical protein complement(1961278..1961787) Macrococcus caseolyticus JCSC5402 7390425 YP_002561230.1 CDS MCCL_1827 NC_011999.1 1961790 1963085 R similar to phosphohydrolase; hypothetical protein complement(1961790..1963085) Macrococcus caseolyticus JCSC5402 7390426 YP_002561231.1 CDS MCCL_1828 NC_011999.1 1963249 1964004 R similar to 2-keto-4-pentenoate hydratase; hypothetical protein complement(1963249..1964004) Macrococcus caseolyticus JCSC5402 7390427 YP_002561232.1 CDS MCCL_1829 NC_011999.1 1964016 1964495 R similar to functionally unknown protein; hypothetical protein complement(1964016..1964495) Macrococcus caseolyticus JCSC5402 7390428 YP_002561233.1 CDS MCCL_1830 NC_011999.1 1964568 1965683 R similar to functionally unknown protein; hypothetical protein complement(1964568..1965683) Macrococcus caseolyticus JCSC5402 7390429 YP_002561234.1 CDS MCCL_1831 NC_011999.1 1965694 1966806 R similar to carbamoylphosphate synthase large subunit; hypothetical protein complement(1965694..1966806) Macrococcus caseolyticus JCSC5402 7390430 YP_002561235.1 CDS MCCL_1832 NC_011999.1 1967306 1968130 R lipoate-protein ligase A complement(1967306..1968130) Macrococcus caseolyticus JCSC5402 7390431 YP_002561236.1 CDS eutD NC_011999.1 1968130 1969119 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(1968130..1969119) Macrococcus caseolyticus JCSC5402 7390432 YP_002561237.1 CDS MCCL_1834 NC_011999.1 1969271 1970020 D similar to functionally unknown protein; heme peroxidase 1969271..1970020 Macrococcus caseolyticus JCSC5402 7390433 YP_002561238.1 CDS MCCL_1835 NC_011999.1 1970057 1971097 R transferrin receptor complement(1970057..1971097) Macrococcus caseolyticus JCSC5402 7390434 YP_002561239.1 CDS MCCL_1836 NC_011999.1 1971189 1971995 R iron compound ABC transporter ATP-binding protein complement(1971189..1971995) Macrococcus caseolyticus JCSC5402 7390435 YP_002561240.1 CDS MCCL_1837 NC_011999.1 1971988 1972941 R similar to ferrichrome ABC transporter permease; hypothetical protein complement(1971988..1972941) Macrococcus caseolyticus JCSC5402 7390436 YP_002561241.1 CDS MCCL_1838 NC_011999.1 1972934 1973893 R iron compound ABC transporter permease complement(1972934..1973893) Macrococcus caseolyticus JCSC5402 7390437 YP_002561242.1 CDS MCCL_1839 NC_011999.1 1974067 1975419 D amino acid/polyamine permease 1974067..1975419 Macrococcus caseolyticus JCSC5402 7390438 YP_002561243.1 CDS MCCL_1840 NC_011999.1 1975600 1977057 R similar to amino acid transporter; hypothetical protein complement(1975600..1977057) Macrococcus caseolyticus JCSC5402 7390439 YP_002561244.1 CDS MCCL_1841 NC_011999.1 1977209 1977571 R similar to functionally unknown protein; hypothetical protein complement(1977209..1977571) Macrococcus caseolyticus JCSC5402 7390440 YP_002561245.1 CDS MCCL_1842 NC_011999.1 1977591 1977902 R similar to functionally unknown protein; hypothetical protein complement(1977591..1977902) Macrococcus caseolyticus JCSC5402 7390441 YP_002561246.1 CDS ung NC_011999.1 1977899 1978558 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1977899..1978558) Macrococcus caseolyticus JCSC5402 7390442 YP_002561247.1 CDS thiD NC_011999.1 1978654 1979484 D hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1978654..1979484 Macrococcus caseolyticus JCSC5402 7390492 YP_002561248.1 CDS MCCL_1845 NC_011999.1 1979724 1980086 D similar to functionally unknown protein; hypothetical protein 1979724..1980086 Macrococcus caseolyticus JCSC5402 7390464 YP_002561249.1 CDS MCCL_1846 NC_011999.1 1980100 1980762 D similar to functionally unknown protein; hypothetical protein 1980100..1980762 Macrococcus caseolyticus JCSC5402 7390443 YP_002561250.1 CDS MCCL_1847 NC_011999.1 1980776 1981654 D similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 1980776..1981654 Macrococcus caseolyticus JCSC5402 7390444 YP_002561251.1 CDS MCCL_1848 NC_011999.1 1981677 1982213 D CysE/LacA/LpxA/NodL family acetyltransferase 1981677..1982213 Macrococcus caseolyticus JCSC5402 7390445 YP_002561252.1 CDS MCCL_1849 NC_011999.1 1982230 1983099 R similar to functionally unknown protein; hypothetical protein complement(1982230..1983099) Macrococcus caseolyticus JCSC5402 7390446 YP_002561253.1 CDS MCCL_1850 NC_011999.1 1983163 1983648 R similar to cytosine adenosine deaminase; hypothetical protein complement(1983163..1983648) Macrococcus caseolyticus JCSC5402 7390447 YP_002561254.1 CDS MCCL_1851 NC_011999.1 1983721 1984320 D deoxypurine kinase 1983721..1984320 Macrococcus caseolyticus JCSC5402 7390448 YP_002561255.1 CDS MCCL_1852 NC_011999.1 1984322 1984978 D deoxyadenosine kinase 1984322..1984978 Macrococcus caseolyticus JCSC5402 7390449 YP_002561256.1 CDS MCCL_1853 NC_011999.1 1985024 1985545 R no similarity; hypothetical protein complement(1985024..1985545) Macrococcus caseolyticus JCSC5402 7390450 YP_002561257.1 CDS MCCL_1854 NC_011999.1 1985661 1986701 R similar to functionally unknown protein; hypothetical protein complement(1985661..1986701) Macrococcus caseolyticus JCSC5402 7390451 YP_002561258.1 CDS ilvE NC_011999.1 1986787 1987857 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(1986787..1987857) Macrococcus caseolyticus JCSC5402 7390452 YP_002561259.1 CDS MCCL_1856 NC_011999.1 1988051 1989004 R similar to functionally unknown protein; hypothetical protein complement(1988051..1989004) Macrococcus caseolyticus JCSC5402 7391142 YP_002561260.1 CDS MCCL_1857 NC_011999.1 1989179 1990369 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(1989179..1990369) Macrococcus caseolyticus JCSC5402 7390453 YP_002561261.1 CDS MCCL_1858 NC_011999.1 1990429 1991709 D similar to functionally unknown protein; hypothetical protein 1990429..1991709 Macrococcus caseolyticus JCSC5402 7390045 YP_002561262.1 CDS MCCL_1859 NC_011999.1 1991684 1992862 D N-acyl-L-amino acid amidohydrolase 1991684..1992862 Macrococcus caseolyticus JCSC5402 7390046 YP_002561263.1 CDS MCCL_1860 NC_011999.1 1992862 1994034 D similar to amidohydrolase; hypothetical protein 1992862..1994034 Macrococcus caseolyticus JCSC5402 7390047 YP_002561264.1 CDS tufA NC_011999.1 1994087 1995274 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1994087..1995274) Macrococcus caseolyticus JCSC5402 7390048 YP_002561265.1 CDS fus NC_011999.1 1995419 1997500 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1995419..1997500) Macrococcus caseolyticus JCSC5402 7390490 YP_002561266.1 CDS rpsG NC_011999.1 1997609 1998079 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1997609..1998079) Macrococcus caseolyticus JCSC5402 7390583 YP_002561267.1 CDS rpsL NC_011999.1 1998189 1998608 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1998189..1998608) Macrococcus caseolyticus JCSC5402 7389552 YP_002561268.1 CDS rpoC NC_011999.1 1999355 2002966 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(1999355..2002966) Macrococcus caseolyticus JCSC5402 7389557 YP_002561269.1 CDS rpoB NC_011999.1 2003070 2006612 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(2003070..2006612) Macrococcus caseolyticus JCSC5402 7389544 YP_002561270.1 CDS MCCL_1867 NC_011999.1 2006805 2007401 R similar to functionally unknown protein; hypothetical protein complement(2006805..2007401) Macrococcus caseolyticus JCSC5402 7389543 YP_002561271.1 CDS rplL NC_011999.1 2007514 2007879 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(2007514..2007879) Macrococcus caseolyticus JCSC5402 7390049 YP_002561272.1 CDS rplJ NC_011999.1 2007935 2008453 R BL5; 50S ribosomal protein L10 complement(2007935..2008453) Macrococcus caseolyticus JCSC5402 7389523 YP_002561273.1 CDS rplA NC_011999.1 2008663 2009358 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(2008663..2009358) Macrococcus caseolyticus JCSC5402 7389521 YP_002561274.1 CDS rplK NC_011999.1 2009465 2009896 R 50S ribosomal protein L11 complement(2009465..2009896) Macrococcus caseolyticus JCSC5402 7389514 YP_002561275.1 CDS nusG NC_011999.1 2010036 2010581 R transcription antitermination factor complement(2010036..2010581) Macrococcus caseolyticus JCSC5402 7389522 YP_002561276.1 CDS secE NC_011999.1 2010595 2010774 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(2010595..2010774) Macrococcus caseolyticus JCSC5402 7390740 YP_002561277.1 CDS MCCL_1874 NC_011999.1 2010917 2011546 R similar to RNA polymerase sigma-H factor; hypothetical protein complement(2010917..2011546) Macrococcus caseolyticus JCSC5402 7389575 YP_002561278.1 CDS MCCL_1875 NC_011999.1 2011622 2012140 R similar to functionally unknown protein; hypothetical protein complement(2011622..2012140) Macrococcus caseolyticus JCSC5402 7390050 YP_002561279.1 CDS MCCL_1876 NC_011999.1 2012140 2012931 R similar to functionally unknown protein; hypothetical protein complement(2012140..2012931) Macrococcus caseolyticus JCSC5402 7390051 YP_002561280.1 CDS MCCL_1877 NC_011999.1 2012870 2013280 R similar to functionally unknown protein; hypothetical protein complement(2012870..2013280) Macrococcus caseolyticus JCSC5402 7390052 YP_002561281.1 CDS cysS NC_011999.1 2013273 2014682 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2013273..2014682) Macrococcus caseolyticus JCSC5402 7390053 YP_002561282.1 CDS cysE NC_011999.1 2014651 2015355 R serine acetyltransferase complement(2014651..2015355) Macrococcus caseolyticus JCSC5402 7390535 YP_002561283.1 CDS gltX NC_011999.1 2015541 2016995 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2015541..2016995) Macrococcus caseolyticus JCSC5402 7390533 YP_002561284.1 CDS ispF NC_011999.1 2017013 2017492 R 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2017013..2017492) Macrococcus caseolyticus JCSC5402 7391100 YP_002561285.1 CDS ispD NC_011999.1 2017489 2018169 R 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2017489..2018169) Macrococcus caseolyticus JCSC5402 7391151 YP_002561286.1 CDS MCCL_1883 NC_011999.1 2018162 2019211 R similar to functionally unknown protein; hypothetical protein complement(2018162..2019211) Macrococcus caseolyticus JCSC5402 7391150 YP_002561287.1 CDS radA NC_011999.1 2019224 2020585 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2019224..2020585) Macrococcus caseolyticus JCSC5402 7390054 YP_002561288.1 CDS MCCL_1885 NC_011999.1 2020810 2022447 R stress response-related Clp ATPase ClpC complement(2020810..2022447) Macrococcus caseolyticus JCSC5402 7389874 YP_002561289.1 CDS MCCL_1886 NC_011999.1 2022555 2023235 R stress response-related Clp ATPase ClpC complement(2022555..2023235) Macrococcus caseolyticus JCSC5402 7390055 YP_002561290.1 CDS MCCL_1887 NC_011999.1 2023248 2024252 R ATP:guanido phosphotransferase complement(2023248..2024252) Macrococcus caseolyticus JCSC5402 7390056 YP_002561291.1 CDS MCCL_1888 NC_011999.1 2024242 2024628 R similar to functionally unknown protein; hypothetical protein complement(2024242..2024628) Macrococcus caseolyticus JCSC5402 7390057 YP_002561292.1 CDS ctsR NC_011999.1 2024639 2025112 R transcriptional regulator CtsR complement(2024639..2025112) Macrococcus caseolyticus JCSC5402 7390058 YP_002561293.1 CDS nupC NC_011999.1 2025285 2026493 D pyrimidine nucleoside transport protein 2025285..2026493 Macrococcus caseolyticus JCSC5402 7390530 YP_002561294.1 CDS MCCL_1891 NC_011999.1 2026573 2027199 R similar to nitroreductase; hypothetical protein complement(2026573..2027199) Macrococcus caseolyticus JCSC5402 7390738 YP_002561295.1 CDS MCCL_1892 NC_011999.1 2027303 2027875 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(2027303..2027875) Macrococcus caseolyticus JCSC5402 7390059 YP_002561296.1 CDS MCCL_1893 NC_011999.1 2027865 2028752 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(2027865..2028752) Macrococcus caseolyticus JCSC5402 7390060 YP_002561297.1 CDS MCCL_1894 NC_011999.1 2028857 2030191 D similar to GntR family transcriptional regulator; hypothetical protein 2028857..2030191 Macrococcus caseolyticus JCSC5402 7390061 YP_002561298.1 CDS lysS NC_011999.1 2030685 2032172 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(2030685..2032172) Macrococcus caseolyticus JCSC5402 7390117 YP_002561299.1 CDS MCCL_1896 NC_011999.1 2032174 2033178 R similar to ihydrouridine synthase TIM-barrel protein; hypothetical protein complement(2032174..2033178) Macrococcus caseolyticus JCSC5402 7390675 YP_002561300.1 CDS MCCL_1897 NC_011999.1 2033189 2033662 R 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2033189..2033662) Macrococcus caseolyticus JCSC5402 7390063 YP_002561301.1 CDS MCCL_1898 NC_011999.1 2033663 2034025 R dihydroneopterin aldolase complement(2033663..2034025) Macrococcus caseolyticus JCSC5402 7390064 YP_002561302.1 CDS MCCL_1899 NC_011999.1 2034015 2034803 R dihydropteroate synthase complement(2034015..2034803) Macrococcus caseolyticus JCSC5402 7390065 YP_002561303.1 CDS cysK NC_011999.1 2034915 2035847 R cysteine synthase complement(2034915..2035847) Macrococcus caseolyticus JCSC5402 7390066 YP_002561304.1 CDS MCCL_1901 NC_011999.1 2035941 2036816 R similar to heat shock chaperonin protein 33; hypothetical protein complement(2035941..2036816) Macrococcus caseolyticus JCSC5402 7390534 YP_002561305.1 CDS ftsH NC_011999.1 2036879 2038951 R cell-division protein complement(2036879..2038951) Macrococcus caseolyticus JCSC5402 7390067 YP_002561306.1 CDS MCCL_1903 NC_011999.1 2039058 2039597 R hypoxanthine phosphoribosyltransferase complement(2039058..2039597) Macrococcus caseolyticus JCSC5402 7390577 YP_002561307.1 CDS MCCL_1904 NC_011999.1 2039599 2040810 R similar to tRNA(Ile)-lysidine synthetase; hypothetical protein complement(2039599..2040810) Macrococcus caseolyticus JCSC5402 7390068 YP_002561308.1 CDS MCCL_1905 NC_011999.1 2040891 2041277 R similar to functionally unknown protein; hypothetical protein complement(2040891..2041277) Macrococcus caseolyticus JCSC5402 7390069 YP_002561309.1 CDS MCCL_1906 NC_011999.1 2041379 2041777 R similar to cell-division initiation protein; hypothetical protein complement(2041379..2041777) Macrococcus caseolyticus JCSC5402 7390070 YP_002561310.1 CDS MCCL_1907 NC_011999.1 2042033 2043208 R tetrapyrrole methylase complement(2042033..2043208) Macrococcus caseolyticus JCSC5402 7390071 YP_002561311.1 CDS MCCL_1908 NC_011999.1 2043210 2044718 R similar to polysaccharide biosynthesis protein; hypothetical protein complement(2043210..2044718) Macrococcus caseolyticus JCSC5402 7390072 YP_002561312.1 CDS mfd NC_011999.1 2044708 2048208 R transcription-repair coupling factor complement(2044708..2048208) Macrococcus caseolyticus JCSC5402 7390073 YP_002561313.1 CDS pth NC_011999.1 2048205 2048774 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2048205..2048774) Macrococcus caseolyticus JCSC5402 7390685 YP_002561314.1 CDS rplY NC_011999.1 2048887 2049537 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(2048887..2049537) Macrococcus caseolyticus JCSC5402 7389846 YP_002561315.1 CDS prs NC_011999.1 2049767 2050732 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(2049767..2050732) Macrococcus caseolyticus JCSC5402 7389536 YP_002561316.1 CDS glmU NC_011999.1 2050764 2052122 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(2050764..2052122) Macrococcus caseolyticus JCSC5402 7389841 YP_002561317.1 CDS spoVG NC_011999.1 2052302 2052649 R stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG complement(2052302..2052649) Macrococcus caseolyticus JCSC5402 7391080 YP_002561318.1 CDS MCCL_1915 NC_011999.1 2052690 2053064 R translation initiation inhibitor complement(2052690..2053064) Macrococcus caseolyticus JCSC5402 7389582 YP_002561319.1 CDS MCCL_1916 NC_011999.1 2053064 2053648 R pur operon repressor complement(2053064..2053648) Macrococcus caseolyticus JCSC5402 7390074 YP_002561320.1 CDS MCCL_1917 NC_011999.1 2053543 2053917 R pur operon repressor complement(2053543..2053917) Macrococcus caseolyticus JCSC5402 7390075 YP_002561321.1 CDS ipk NC_011999.1 2053963 2054814 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(2053963..2054814) Macrococcus caseolyticus JCSC5402 7390076 YP_002561322.1 CDS ksgA NC_011999.1 2055299 2056189 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(2055299..2056189) Macrococcus caseolyticus JCSC5402 7390077 YP_002561323.1 CDS MCCL_1920 NC_011999.1 2056189 2056734 R similar to functionally unknown protein; hypothetical protein complement(2056189..2056734) Macrococcus caseolyticus JCSC5402 7391153 YP_002561324.1 CDS MCCL_1921 NC_011999.1 2056832 2057608 R similar to TatD family deoxyribonuclease; hypothetical protein complement(2056832..2057608) Macrococcus caseolyticus JCSC5402 7390078 YP_002561325.1 CDS metS NC_011999.1 2057623 2059587 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(2057623..2059587) Macrococcus caseolyticus JCSC5402 7390079 YP_002561326.1 CDS MCCL_1923 NC_011999.1 2059886 2060173 D transcriptional regulator abrB 2059886..2060173 Macrococcus caseolyticus JCSC5402 7390684 YP_002561327.1 CDS MCCL_1924 NC_011999.1 2060214 2061050 R tetrapyrrole methylase complement(2060214..2061050) Macrococcus caseolyticus JCSC5402 7390080 YP_002561328.1 CDS MCCL_1925 NC_011999.1 2061294 2062049 R similar to functionally unknown protein; hypothetical protein complement(2061294..2062049) Macrococcus caseolyticus JCSC5402 7390081 YP_002561329.1 CDS MCCL_1926 NC_011999.1 2062061 2062396 R in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA complement(2062061..2062396) Macrococcus caseolyticus JCSC5402 7390082 YP_002561330.1 CDS MCCL_1927 NC_011999.1 2062408 2063208 R similar to signal peptidase; hypothetical protein complement(2062408..2063208) Macrococcus caseolyticus JCSC5402 7390083 YP_002561331.1 CDS MCCL_1928 NC_011999.1 2063205 2064125 R similar to DNA polymerase III delta subunit; hypothetical protein complement(2063205..2064125) Macrococcus caseolyticus JCSC5402 7390084 YP_002561332.1 CDS MCCL_1929 NC_011999.1 2064173 2064502 R similar to functionally unknown protein; hypothetical protein complement(2064173..2064502) Macrococcus caseolyticus JCSC5402 7390085 YP_002561333.1 CDS tmk NC_011999.1 2064536 2065150 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2064536..2065150) Macrococcus caseolyticus JCSC5402 7390086 YP_002561334.1 CDS MCCL_1931 NC_011999.1 2065164 2066561 R similar to Orn/Lys/Arg decarboxylase family protein; hypothetical protein complement(2065164..2066561) Macrococcus caseolyticus JCSC5402 7390087 YP_002561335.1 CDS MCCL_1932 NC_011999.1 2071943 2072761 R similar to functionally unknown protein; hypothetical protein complement(2071943..2072761) Macrococcus caseolyticus JCSC5402 7390120 YP_002561336.1 CDS recR NC_011999.1 2073031 2073627 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2073031..2073627) Macrococcus caseolyticus JCSC5402 7390089 YP_002561337.1 CDS MCCL_1934 NC_011999.1 2073629 2073949 R similar to functionally unknown protein; hypothetical protein complement(2073629..2073949) Macrococcus caseolyticus JCSC5402 7389881 YP_002561338.1 CDS MCCL_1935 NC_011999.1 2073966 2075606 R DNA polymerase III gamma and tau subunits complement(2073966..2075606) Macrococcus caseolyticus JCSC5402 7390090 YP_002561339.1 CDS MCCL_1936 NC_011999.1 2076080 2076808 R GntR family transcriptional regulator complement(2076080..2076808) Macrococcus caseolyticus JCSC5402 7390091 YP_002561340.1 CDS MCCL_1937 NC_011999.1 2076858 2078495 R alpha-glucosidase complement(2076858..2078495) Macrococcus caseolyticus JCSC5402 7390092 YP_002561341.1 CDS MCCL_1938 NC_011999.1 2078578 2080083 R phosphotransferase system trehalose-specific enzyme IIBC component complement(2078578..2080083) Macrococcus caseolyticus JCSC5402 7390093 YP_002561342.1 CDS MCCL_1939 NC_011999.1 2080369 2080737 R similar to functionally unknown protein; hypothetical protein complement(2080369..2080737) Macrococcus caseolyticus JCSC5402 7390169 YP_002561343.1 CDS MCCL_1940 NC_011999.1 2082130 2082792 D no similarity; hypothetical protein 2082130..2082792 Macrococcus caseolyticus JCSC5402 7390095 YP_002561344.1 CDS guaA NC_011999.1 2082905 2084446 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2082905..2084446) Macrococcus caseolyticus JCSC5402 7390096 YP_002561345.1 CDS MCCL_1942 NC_011999.1 2084510 2085979 R IMP dehydrogenase complement(2084510..2085979) Macrococcus caseolyticus JCSC5402 7391112 YP_002561346.1 CDS MCCL_1943 NC_011999.1 2086024 2087292 R xanthine uracil permease complement(2086024..2087292) Macrococcus caseolyticus JCSC5402 7390097 YP_002561347.1 CDS xprT NC_011999.1 2087292 2087876 R Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase complement(2087292..2087876) Macrococcus caseolyticus JCSC5402 7390098 YP_002561348.1 CDS MCCL_1945 NC_011999.1 2088479 2089399 D similar to functionally unknown protein; hypothetical protein 2088479..2089399 Macrococcus caseolyticus JCSC5402 7390503 YP_002561349.1 CDS MCCL_1946 NC_011999.1 2089500 2090114 D no similarity; hypothetical protein 2089500..2090114 Macrococcus caseolyticus JCSC5402 7390099 YP_002561350.1 CDS MCCL_1947 NC_011999.1 2090609 2091142 R single-strand DNA-binding protein complement(2090609..2091142) Macrococcus caseolyticus JCSC5402 7390100 YP_002561351.1 CDS MCCL_1948 NC_011999.1 2091920 2093020 R GTP-binding protein complement(2091920..2093020) Macrococcus caseolyticus JCSC5402 7390101 YP_002561352.1 CDS MCCL_1949 NC_011999.1 2093237 2094124 R similar to functionally unknown protein; hypothetical protein complement(2093237..2094124) Macrococcus caseolyticus JCSC5402 7390102 YP_002561353.1 CDS MCCL_1950 NC_011999.1 2094125 2094988 R chromosome partitioning protein ParB complement(2094125..2094988) Macrococcus caseolyticus JCSC5402 7390103 YP_002561354.1 CDS MCCL_1951 NC_011999.1 2094981 2095742 R chromosome partitioning protein ParA complement(2094981..2095742) Macrococcus caseolyticus JCSC5402 7390104 YP_002561355.1 CDS MCCL_1952 NC_011999.1 2095880 2096719 R similar to chromosome partitioning protein ParB; hypothetical protein complement(2095880..2096719) Macrococcus caseolyticus JCSC5402 7390105 YP_002561356.1 CDS gidB NC_011999.1 2096749 2097465 R glucose-inhibited division protein B complement(2096749..2097465) Macrococcus caseolyticus JCSC5402 7390106 YP_002561357.1 CDS gidA NC_011999.1 2097466 2099340 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(2097466..2099340) Macrococcus caseolyticus JCSC5402 7391087 YP_002561358.1 CDS trmE NC_011999.1 2099353 2100717 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2099353..2100717) Macrococcus caseolyticus JCSC5402 7391086 YP_002561359.1 CDS MCCL_1956 NC_011999.1 2100855 2101598 R similar to single-stranded nucleic acid binding protein; hypothetical protein complement(2100855..2101598) Macrococcus caseolyticus JCSC5402 7390482 YP_002561360.1 CDS rnpA NC_011999.1 2101615 2101962 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2101615..2101962) Macrococcus caseolyticus JCSC5402 7390107 YP_002561361.1 CDS MCCL_plsE0001 NC_012000.1 661 1605 R plasmid replication initiation protein complement(661..1605) Macrococcus caseolyticus JCSC5402 7385761 YP_002561362.1 CDS MCCL_plsE0002 NC_012000.1 2166 2861 R similar to functionally unknown protein; hypothetical protein complement(2166..2861) Macrococcus caseolyticus JCSC5402 7385758 YP_002561363.1 CDS MCCL_plsE0003 NC_012000.1 2590 3552 R similar to mobilization protein MobA; hypothetical protein complement(2590..3552) Macrococcus caseolyticus JCSC5402 7385759 YP_002561364.1 CDS MCCL_plsE0004 NC_012000.1 3534 3932 R mobilization protein MobC complement(3534..3932) Macrococcus caseolyticus JCSC5402 7385760 YP_002561365.1 CDS MCCL_plsF0001 NC_012001.1 1132 2037 D plasmid replication initiation protein 1132..2037 Macrococcus caseolyticus JCSC5402 7385766 YP_002561366.1 CDS MCCL_plsF0002 NC_012001.1 2140 2514 D similar to functionally unknown protein; hypothetical protein 2140..2514 Macrococcus caseolyticus JCSC5402 7385763 YP_002561367.1 CDS MCCL_plsF0003 NC_012001.1 3075 3380 D similar to mobilization protein MobC; hypothetical protein 3075..3380 Macrococcus caseolyticus JCSC5402 7385764 YP_002561368.1 CDS MCCL_plsF0004 NC_012001.1 3447 4196 D similar to mobilization protein MobA; hypothetical protein 3447..4196 Macrococcus caseolyticus JCSC5402 7385765 YP_002561369.1 CDS MCCL_plsG0001 NC_012002.1 219 974 R truncated mobilization protein complement(219..974) Macrococcus caseolyticus JCSC5402 7385773 YP_002561370.1 CDS MCCL_plsG0002 NC_012002.1 956 1345 R truncated mobilization protein complement(956..1345) Macrococcus caseolyticus JCSC5402 7385769 YP_002561371.1 CDS MCCL_plsG0003 NC_012002.1 1899 2273 R no similarity; hypothetical protein complement(1899..2273) Macrococcus caseolyticus JCSC5402 7385770 YP_002561372.1 CDS MCCL_plsG0004 NC_012002.1 2376 3257 R plasmid replication initiation protein complement(2376..3257) Macrococcus caseolyticus JCSC5402 7385771 YP_002561373.1 CDS MCCL_plsG0005 NC_012002.1 3582 4013 R no similarity; hypothetical protein complement(3582..4013) Macrococcus caseolyticus JCSC5402 7385772 YP_002561374.1 CDS MCCL_plsH0001 NC_012003.1 203 1090 D plasmid replication initiation protein 203..1090 Macrococcus caseolyticus JCSC5402 7385777 YP_002561375.1 CDS MCCL_plsH0002 NC_012003.1 2065 2493 D no similarity; hypothetical protein 2065..2493 Macrococcus caseolyticus JCSC5402 7385775 YP_002561376.1 CDS MCCL_plsH0003 NC_012003.1 2604 2915 D no similarity; hypothetical protein 2604..2915 Macrococcus caseolyticus JCSC5402 7385776 MCCL_tRNA01 tRNA MCCL_tRNA01 NC_011999.1 25884 25958 D tRNA-Glu 25884..25958 Macrococcus caseolyticus JCSC5402 7389848 MCCL_tRNA02 tRNA MCCL_tRNA02 NC_011999.1 25983 26055 D tRNA-Asp 25983..26055 Macrococcus caseolyticus JCSC5402 7389673 MCCL_tRNA03 tRNA MCCL_tRNA03 NC_011999.1 327804 327880 D tRNA-Ile 327804..327880 Macrococcus caseolyticus JCSC5402 7391017 MCCL_tRNA04 tRNA MCCL_tRNA04 NC_011999.1 327913 327988 D tRNA-Ala 327913..327988 Macrococcus caseolyticus JCSC5402 7390108 MCCL_tRNA05 tRNA MCCL_tRNA05 NC_011999.1 331276 331350 D tRNA-Asn 331276..331350 Macrococcus caseolyticus JCSC5402 7390109 MCCL_tRNA06 tRNA MCCL_tRNA06 NC_011999.1 331355 331429 D tRNA-Glu 331355..331429 Macrococcus caseolyticus JCSC5402 7390110 MCCL_tRNA07 tRNA MCCL_tRNA07 NC_011999.1 331433 331508 D tRNA-Val 331433..331508 Macrococcus caseolyticus JCSC5402 7390125 MCCL_tRNA08 tRNA MCCL_tRNA08 NC_011999.1 331537 331620 D tRNA-Tyr 331537..331620 Macrococcus caseolyticus JCSC5402 7390126 MCCL_tRNA09 tRNA MCCL_tRNA09 NC_011999.1 331626 331700 D tRNA-Gln 331626..331700 Macrococcus caseolyticus JCSC5402 7390128 MCCL_tRNA10 tRNA MCCL_tRNA10 NC_011999.1 331707 331779 D tRNA-Lys 331707..331779 Macrococcus caseolyticus JCSC5402 7390129 MCCL_tRNA11 tRNA MCCL_tRNA11 NC_011999.1 1349423 1349493 R tRNA-Gly complement(1349423..1349493) Macrococcus caseolyticus JCSC5402 7389190 MCCL_tRNA12 tRNA MCCL_tRNA12 NC_011999.1 1421257 1421333 R tRNA-Arg complement(1421257..1421333) Macrococcus caseolyticus JCSC5402 7389321 MCCL_tRNA13 tRNA MCCL_tRNA13 NC_011999.1 1636520 1636611 R tRNA-Ser complement(1636520..1636611) Macrococcus caseolyticus JCSC5402 7389459 MCCL_tRNA14 tRNA MCCL_tRNA14 NC_011999.1 1636652 1636723 R tRNA-Glu complement(1636652..1636723) Macrococcus caseolyticus JCSC5402 7390134 MCCL_tRNA15 tRNA MCCL_tRNA15 NC_011999.1 1636724 1636798 R tRNA-Asn complement(1636724..1636798) Macrococcus caseolyticus JCSC5402 7390135 MCCL_tRNA16 tRNA MCCL_tRNA16 NC_011999.1 1636803 1636876 R tRNA-Gly complement(1636803..1636876) Macrococcus caseolyticus JCSC5402 7390136 MCCL_tRNA17 tRNA MCCL_tRNA17 NC_011999.1 1636884 1636959 R tRNA-His complement(1636884..1636959) Macrococcus caseolyticus JCSC5402 7390137 MCCL_tRNA18 tRNA MCCL_tRNA18 NC_011999.1 1636982 1637054 R tRNA-Phe complement(1636982..1637054) Macrococcus caseolyticus JCSC5402 7390138 MCCL_tRNA19 tRNA MCCL_tRNA19 NC_011999.1 1637060 1637135 R tRNA-Asp complement(1637060..1637135) Macrococcus caseolyticus JCSC5402 7390139 MCCL_tRNA20 tRNA MCCL_tRNA20 NC_011999.1 1637144 1637217 R tRNA-Met complement(1637144..1637217) Macrococcus caseolyticus JCSC5402 7390140 MCCL_tRNA21 tRNA MCCL_tRNA21 NC_011999.1 1670657 1670744 R tRNA-Ser complement(1670657..1670744) Macrococcus caseolyticus JCSC5402 7391149 MCCL_tRNA22 tRNA MCCL_tRNA22 NC_011999.1 1670746 1670820 R tRNA-Asn complement(1670746..1670820) Macrococcus caseolyticus JCSC5402 7390142 MCCL_tRNA23 tRNA MCCL_tRNA23 NC_011999.1 1716948 1717029 R tRNA-Leu complement(1716948..1717029) Macrococcus caseolyticus JCSC5402 7389741 MCCL_tRNA24 tRNA MCCL_tRNA24 NC_011999.1 1717227 1717300 R tRNA-Cys complement(1717227..1717300) Macrococcus caseolyticus JCSC5402 7390144 MCCL_tRNA25 tRNA MCCL_tRNA25 NC_011999.1 1717306 1717377 R tRNA-Gln complement(1717306..1717377) Macrococcus caseolyticus JCSC5402 7390145 MCCL_tRNA26 tRNA MCCL_tRNA26 NC_011999.1 1717390 1717462 R tRNA-His complement(1717390..1717462) Macrococcus caseolyticus JCSC5402 7390146 MCCL_tRNA27 tRNA MCCL_tRNA27 NC_011999.1 1717465 1717538 R tRNA-Trp complement(1717465..1717538) Macrococcus caseolyticus JCSC5402 7390147 MCCL_tRNA28 tRNA MCCL_tRNA28 NC_011999.1 1717571 1717654 R tRNA-Tyr complement(1717571..1717654) Macrococcus caseolyticus JCSC5402 7390148 MCCL_tRNA29 tRNA MCCL_tRNA29 NC_011999.1 1717663 1717738 R tRNA-Thr complement(1717663..1717738) Macrococcus caseolyticus JCSC5402 7390149 MCCL_tRNA30 tRNA MCCL_tRNA30 NC_011999.1 1717758 1717830 R tRNA-Phe complement(1717758..1717830) Macrococcus caseolyticus JCSC5402 7390150 MCCL_tRNA31 tRNA MCCL_tRNA31 NC_011999.1 1717836 1717911 R tRNA-Asp complement(1717836..1717911) Macrococcus caseolyticus JCSC5402 7390151 MCCL_tRNA32 tRNA MCCL_tRNA32 NC_011999.1 1717921 1717994 R tRNA-Met complement(1717921..1717994) Macrococcus caseolyticus JCSC5402 7390152 MCCL_tRNA33 tRNA MCCL_tRNA33 NC_011999.1 1718050 1718142 R tRNA-Ser complement(1718050..1718142) Macrococcus caseolyticus JCSC5402 7390153 MCCL_tRNA34 tRNA MCCL_tRNA34 NC_011999.1 1718153 1718226 R tRNA-Met complement(1718153..1718226) Macrococcus caseolyticus JCSC5402 7390154 MCCL_tRNA35 tRNA MCCL_tRNA35 NC_011999.1 1718259 1718335 R tRNA-Met complement(1718259..1718335) Macrococcus caseolyticus JCSC5402 7390155 MCCL_tRNA36 tRNA MCCL_tRNA36 NC_011999.1 1718355 1718430 R tRNA-Ala complement(1718355..1718430) Macrococcus caseolyticus JCSC5402 7390156 MCCL_tRNA37 tRNA MCCL_tRNA37 NC_011999.1 1718447 1718520 R tRNA-Pro complement(1718447..1718520) Macrococcus caseolyticus JCSC5402 7390157 MCCL_tRNA38 tRNA MCCL_tRNA38 NC_011999.1 1718534 1718610 R tRNA-Arg complement(1718534..1718610) Macrococcus caseolyticus JCSC5402 7390158 MCCL_tRNA39 tRNA MCCL_tRNA39 NC_011999.1 1718626 1718714 R tRNA-Leu complement(1718626..1718714) Macrococcus caseolyticus JCSC5402 7390159 MCCL_tRNA40 tRNA MCCL_tRNA40 NC_011999.1 1718731 1718805 R tRNA-Gly complement(1718731..1718805) Macrococcus caseolyticus JCSC5402 7390160 MCCL_tRNA41 tRNA MCCL_tRNA41 NC_011999.1 1718811 1718894 R tRNA-Leu complement(1718811..1718894) Macrococcus caseolyticus JCSC5402 7390161 MCCL_tRNA42 tRNA MCCL_tRNA42 NC_011999.1 1718912 1718987 R tRNA-Lys complement(1718912..1718987) Macrococcus caseolyticus JCSC5402 7390162 MCCL_tRNA43 tRNA MCCL_tRNA43 NC_011999.1 1718994 1719069 R tRNA-Thr complement(1718994..1719069) Macrococcus caseolyticus JCSC5402 7390163 MCCL_tRNA44 tRNA MCCL_tRNA44 NC_011999.1 1719081 1719156 R tRNA-Val complement(1719081..1719156) Macrococcus caseolyticus JCSC5402 7390164 MCCL_tRNA45 tRNA MCCL_tRNA45 NC_011999.1 1866961 1867034 R tRNA-Gly complement(1866961..1867034) Macrococcus caseolyticus JCSC5402 7390116 MCCL_tRNA46 tRNA MCCL_tRNA46 NC_011999.1 1867058 1867140 R tRNA-Leu complement(1867058..1867140) Macrococcus caseolyticus JCSC5402 7390166 MCCL_tRNA47 tRNA MCCL_tRNA47 NC_011999.1 1867277 1867348 R tRNA-Glu complement(1867277..1867348) Macrococcus caseolyticus JCSC5402 7390167 MCCL_tRNA48 tRNA MCCL_tRNA48 NC_011999.1 2080213 2080305 R tRNA-Ser complement(2080213..2080305) Macrococcus caseolyticus JCSC5402 7390094 MCCL_rRNA01 rRNA MCCL_rRNA01 NC_011999.1 326169 327715 D 16S ribosomal RNA 326169..327715 Macrococcus caseolyticus JCSC5402 7391016 MCCL_rRNA02 rRNA MCCL_rRNA02 NC_011999.1 328126 330981 D 23S ribosomal RNA 328126..330981 Macrococcus caseolyticus JCSC5402 7390123 MCCL_rRNA03 rRNA MCCL_rRNA03 NC_011999.1 331149 331263 D 5S ribosomal RNA 331149..331263 Macrococcus caseolyticus JCSC5402 7390124 MCCL_rRNA04 rRNA MCCL_rRNA04 NC_011999.1 1719173 1719283 R 5S ribosomal RNA complement(1719173..1719283) Macrococcus caseolyticus JCSC5402 7390165 MCCL_rRNA05 rRNA MCCL_rRNA05 NC_011999.1 1719451 1722306 R 23S ribosomal RNA complement(1719451..1722306) Macrococcus caseolyticus JCSC5402 7390111 MCCL_rRNA06 rRNA MCCL_rRNA06 NC_011999.1 1722522 1724078 R 16S ribosomal RNA complement(1722522..1724078) Macrococcus caseolyticus JCSC5402 7390112 MCCL_rRNA07 rRNA MCCL_rRNA07 NC_011999.1 1861920 1862030 R 5S ribosomal RNA complement(1861920..1862030) Macrococcus caseolyticus JCSC5402 7390822 MCCL_rRNA08 rRNA MCCL_rRNA08 NC_011999.1 1862198 1865053 R 23S ribosomal RNA complement(1862198..1865053) Macrococcus caseolyticus JCSC5402 7390114 MCCL_rRNA09 rRNA MCCL_rRNA09 NC_011999.1 1865269 1866825 R 16S ribosomal RNA complement(1865269..1866825) Macrococcus caseolyticus JCSC5402 7390115 MCCL_rRNA10 rRNA MCCL_rRNA10 NC_011999.1 2030304 2030414 R 5S ribosomal RNA complement(2030304..2030414) Macrococcus caseolyticus JCSC5402 7390062 MCCL_rRNA11 rRNA MCCL_rRNA11 NC_011999.1 2066718 2066828 R 5S ribosomal RNA complement(2066718..2066828) Macrococcus caseolyticus JCSC5402 7390088 MCCL_rRNA12 rRNA MCCL_rRNA12 NC_011999.1 2066996 2069851 R 23S ribosomal RNA complement(2066996..2069851) Macrococcus caseolyticus JCSC5402 7390118 MCCL_rRNA13 rRNA MCCL_rRNA13 NC_011999.1 2070067 2071623 R 16S ribosomal RNA complement(2070067..2071623) Macrococcus caseolyticus JCSC5402 7390119