-- dump date 20120503_173434 -- class Genbank::CDS -- table cds_note -- id note XP_001561968.1 serine peptidase, clan SC, family S9A-like protein XP_001561991.1 deoxyuridine triphosphatase, putative XP_001561544.1 serine peptidase, Clan S-, family S54, putative XP_001561552.1 deleted EC_number 2.7.1.37 XP_001561580.1 peptidyl-dipeptidase, putative XP_001561691.1 organelle-type calcium ATPase XP_001561692.1 organelle-type calcium ATPase XP_001561764.1 serine peptidase, Clan S-, family S54, putative XP_001562505.1 pitrilysin-like metalloprotease XP_001562699.1 serine peptidase, clan SC, family S9A-like protein XP_001562731.1 mitochondrial RNA binding protein 2 XP_001562791.1 mitogen-activated protein kinase, putative XP_001562816.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562817.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562818.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562819.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562820.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562821.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562822.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562823.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562824.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562825.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562826.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562827.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562828.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562829.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562830.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562863.1 nuclear transport factor 2, putative XP_001562920.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562921.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562922.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562923.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562924.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562925.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562927.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562928.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562929.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562930.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562931.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562932.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562933.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562934.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562935.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562936.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562937.1 metallo-peptidase, Clan MA(M), Family M8 XP_001562938.1 metallo-peptidase, Clan MA(M), Family M8 XP_001563049.1 TATE DNA transposons XP_001563142.1 puromycin-sensitive aminopeptidase-like protein XP_001563211.1 mitochondrial processing peptidase alpha subunit, putative XP_001563220.1 serine peptidase, Clan SJ, family S16, putative XP_001563228.1 subtilisin-like serine peptidase XP_001563382.1 RNA editing 3' terminal uridylyl transferase 1 XP_001563499.1 serine peptidase, Clan SJ, family S16, putative XP_001563594.1 ribosomal protein S6, putative XP_001563669.1 apurinic/apyrimidinic endonuclease-redox protein XP_001563688.1 metallopeptidase, putative XP_001563724.1 delta-COP, putative; delta-coat protein, putative XP_001563883.1 hydrolase-like protein XP_001563884.1 hydrolase-like protein XP_001563953.1 deleted EC_number 2.7.1.37 XP_001564040.1 deleted EC_number 2.7.1.37 XP_001564182.1 methionine aminopeptidase, putative XP_001564262.1 cathepsin L-like protein; cysteine protease A; cysteine proteinase a XP_001564264.1 mitogen-activated protein kinase XP_001564345.1 proteasome regulatory non-ATP-ase subunit 11,putative XP_001564389.1 mitochondrial ATP-dependent zinc metallopeptidase, putative XP_001564514.1 serine/threonine protein phosphatase-like protein XP_001564524.1 zinc carboxypeptidase, putative XP_001564750.1 mitochondrial processing peptidase alpha subunit, putative XP_001564791.1 proteasome regulatory non-ATP-ase subunit 5,putative XP_001564794.1 small GTPase, putative XP_001564836.1 cell division protein kinase 2 XP_001564929.1 methyltransferase, putative XP_001565015.1 small nuclear ribonucleoprotein, putative XP_001565047.1 centrin, putative XP_001562236.1 tryparedoxin peroxidase XP_001565169.1 quinone oxidoreductase-like protein XP_001565170.1 invertase-like protein; sucrose hydrolase-like protein XP_001565171.1 invertase-like protein; sucrose hydrolase-like protein XP_001565175.1 metallo-peptidase, Clan MF, Family M17 XP_001565280.1 guanine nucleotide-binding protein beta subunit-like protein XP_001565322.1 5' partial, 3' end is on adjacent contig XP_001565323.1 3' partial, 5' end is on adjacent contig XP_001565405.1 protein kinase, putative XP_001565489.1 basal body component, putative XP_001565621.1 deleted EC_number 2.1.1.73 XP_001565695.1 deleted EC_number 2.7.1.37 XP_001562273.1 RNA editing 3' terminal uridylyl transferase 2 XP_001562323.1 heat shock 70 protein-like protein XP_001562354.1 aldo/keto reductase, putative XP_001562370.1 guanine nucleotide-binding protein-like protein XP_001562390.1 thimet oligopeptidase, putative XP_001562466.1 metallopeptidase, putative XP_001562489.1 multidrug resistance protein-like protein; p-glycoprotein-like protein XP_001565879.1 mitochondrial RNA binding protein 1 XP_001565921.1 peptidyl dipeptidase, putative XP_001565922.1 peptidyl dipeptidase, putative XP_001566029.1 peptidyl dipeptidase, putative XP_001566030.1 peptidyl dipeptidase, putative XP_001566034.1 peptidyl dipeptidase, putative XP_001566248.1 protein kinase, putative XP_001566285.1 subtilisin-like serine peptidase XP_001566321.1 guanine nucleotide-binding protein beta subunit-like protein XP_001566347.1 deleted EC_number 2.7.1.37 XP_001566431.1 cysteine peptidase C (CPC) XP_001566485.1 deleted EC_number 2.7.1.37 XP_001566589.1 deleted EC_number 2.7.1.37 XP_001566590.1 serine peptidase, Clan SJ, family S16, putative XP_001566596.1 deleted EC_number 2.7.1.37 XP_001566606.1 deleted EC_number 2.7.1.37 XP_001562226.1 similarity to T. cruzi and T. brucei genes XP_001566650.1 predicted protein, len = 217 aa, unknown protein; predicted pI = 6.5080 XP_001566667.1 predicted protein, len = 772 aa, unknown protein; predicted pI = 6.4656 XP_001566677.1 predicted protein, len = 1531 aa, unknown; predicted pI = 8.8260 XP_001566679.1 not present in LmjF or LinJ XP_001566680.1 predicted protein, len = 425 aa, unknown protein; predicted pI = 6.1056 XP_001566681.1 predicted protein, len = 425 aa, unknown protein; predicted pI = 6.1056 XP_001566682.1 predicted protein, len = 477 aa, unknown protein; predicted pI = 7.7458, contains 6 WD domain repeats XP_001566685.1 predicted protein, len = 212 aa, unknown; predicted pI = 4.7809; contains a weak hit to a ribosome recycling factor domain XP_001566686.1 predicted protein, len = 309 aa, possibly eukaryotic translation initiation factor; predicted pI = 6.9524; reasonable similarity to many, eukaryotic translation initiation factors in diverse organisms; contains a predicted eukaryotic initiation factor 4E pfam domain XP_001566711.1 nuclear movement protein, putative XP_001566731.1 predicted protein, len = 196 aa, probably surface protein amastin; predicted pI = 8.8049; good similarity to surface protein amastin in Leishmania amazonensis and Leishmania mexicana; contains 4 probable transmembrane helices (aa 13-35, 86-108, 115-137 and 171-193) XP_001566756.1 predicted protein, len = 540 aa, importin alpha-like protein; predicted pI = 4.6352; high similarity to several importin alpha-like proteins in plants; contains 8 Armadillo/beta-catenin-like repeats XP_001566757.1 predicted protein, len = 95 aa, unknown; predicted pI = 9.7687 XP_001566758.1 predicted protein, len = 185 aa, unknown; predicted pI = 7.8666 XP_001566764.1 LmjF30.1220, predicted protein, len = 628 aa,unknown protein; predicted pI = 8.3497; possible pseudogene in combination with LmjF30.1220 or possible sequencing error XP_001566765.1 predicted protein, len = 724 aa, unknown protein c52e12.1; predicted pI = 8.4768 XP_001566783.1 LmjF30.1420, predicted protein, len = 175 aa,probable ama1 like protein; predicted pI = 8.0955; has very high similarity to the N-terminal region of Q9U5N9,ama1 protein in Leishmania major XP_001566810.1 predicted protein, len = 499 aa, probably succinyl-coa:3-ketoacid-coenzyme a transferase; predicted pI = 8.1430; good similarity to many eukaryotic succinyl-coa:3-ketoacid-coenzyme a transferases; contains good hits to 2 coenzyme A transferase pfam domains XP_001566815.1 predicted protein, len = 606 aa, unknown; predicted pI = 9.1861 XP_001566816.1 predicted protein, len = 499 aa, probably succinyl-coa:3-ketoacid-coenzyme a transferase; predicted pI = 8.1430; good similarity to many eukaryotic succinyl-coa:3-ketoacid-coenzyme a transferases; contains good hits to 2 coenzyme A transferase pfam domains XP_001566831.1 predicted protein, len = 400 aa, probably alcohol dehydrogenase; predicted pI = 8.0688; good similarity to many alcohol dehydrogenases in bacteria; contains a very good hit to an iron-containing alcohol dehydrogenase pfam domain XP_001566845.1 predicted protein, len = 252 aa, unknown; predicted pI = 4.8982 XP_001566850.1 predicted protein, len = 705 aa, possibly hypothetical tubulin-tyrosine ligase containing protein; predicted pI = 8.2092; reasonable similarity to several hypothetical tubulin-tyrosine ligase containing proteins (eg Mus musculus, EMBL: AK084005); contains a tubulin-tyrosine ligase family pfam domain XP_001566865.1 predicted protein, len = 778 aa, unknown; predicted pI = 5.3158 XP_001566866.1 predicted protein, len = 337 aa, unknown; predicted pI = 9.7726; contains a N-terminal DNAJ domain XP_001566867.1 predicted protein, len = 636 aa, probably heat shock 70-related protein 1, mitochondrial precursor; predicted pI = 5.9507; good similarity to HS71_LEIMA, heat shock 70-related protein 1, mitochondrial precursor in Leishmania major; contains a very conclusive Hsp70 protein pfam domain across the whole protein; 4 other copies in tandem repeat (GeneDB_Lmajor:LmjF30.2470),(GeneDB_Lmajor:LmjF30.2480), (GeneDB_Lmajor:LmjF30.2490),(GeneDB_Lmajor:LmjF30.2550) XP_001566878.1 predicted protein, len = 410 aa, unknown; predicted pI = 7.2757 XP_001566951.1 predicted protein, len = 142 aa, unknown; predicted pI = 7.1591 XP_001566959.1 predicted protein, len = 359 aa, conserved hypothetical; predicted pI = 5.0998; good similarity to several morn repeat proteins; contains 15 MORN repeat motifs XP_001566978.1 methionine adenosyltransferase; s-adenosylmethionine synthetase; methionine adenosyltransferase XP_001566984.1 predicted protein, len = 748 aa, probably serine/arginine-rich protein specific kinase srpk; predicted pI = 4.5651; good similarity to Q8I900,serine/arginine-rich protein specific kinase srpk in Trypanosoma cruzi; contains a protein kinase pfam domain XP_001566987.1 predicted protein, len = 389 aa, unknown; predicted pI = 4.7422 XP_001566988.1 predicted protein, len = 371 aa, unknown protein; predicted pI = 9.0160 XP_001566989.1 predicted protein, len = 248 aa, possibly putative g1 cyclin cyce2; predicted pI = 7.0619; reasonable similarity to Q8I0M5, putative g1 cyclin cyce2 in Trypanosoma brucei, annotated as CYC2-like protein,putative (pers.comm J. Mottram, University of Glasgow) XP_001566999.1 predicted protein, len = 126 aa, 60S acidic ribosomal protein p2-1; predicted pI = 4.3324; high similarity to RLA2_LEIIN, 60S acidic ribosomal protein p2-1 in Leishmania infantum; second copy in tandem array (GeneDB_Lmajor:LmjF30.3720); contains a 60s acidic ribosomal protein pfam domain XP_001567000.1 predicted protein, len = 223 aa, probably agp2beta-1 protein; predicted pI = 8.0033; good similarity to Q26958, agp2beta-1 protein in Trypanosoma cruzi XP_001567217.1 metallo-peptidase, Clan MA(M), Family M8 XP_001567218.1 metallo-peptidase, Clan MA(M), Family M8 XP_001567219.1 metallo-peptidase, Clan MA(M), Family M8 XP_001567270.1 ferredoxin, 2fe-2s-like protein XP_001567271.1 ferredoxin, 2fe-2s-like protein XP_001567274.1 ferredoxin, 2fe-2s-like protein XP_001567275.1 ferredoxin, 2fe-2s-like protein XP_001567322.1 deleted EC_number 2.7.1.37 XP_001567335.1 peptidase, putative XP_001567340.1 peptidase, putative XP_001567349.1 deleted EC_number 2.7.1.37 XP_001567392.1 deleted EC_number 2.7.1.37 XP_001567469.1 deleted EC_number 2.7.1.37 XP_001567655.1 exonuclease-like protein XP_001567791.1 zinc carboxypeptidase, putative XP_001567809.1 serine peptidase, putative XP_001567929.1 vesicle-associated membrane protein, putative XP_001567979.1 small GTP-binding protein Rab18, putative XP_001567993.1 mitochondrial XP_001567994.1 deleted EC_number 2.7.1.37 XP_001568056.1 mitochondrial processing peptidase alpha subunit, putative XP_001568078.1 cysteine peptidase, Clan CA, family C51,putative XP_001568080.1 cysteine peptidase, Clan CA, family C51,putative XP_001568240.1 mitochondrial processing peptidase, beta subunit, putative XP_001568267.1 mismatch repair protein PMS1, putative XP_001568490.1 calmodulin-like protein XP_001568500.1 protein kinase, putative XP_001568502.1 Serine peptidase, Clan SC, Family S09X XP_001568540.1 unknown EC_number=3.6.3 XP_001568691.1 cell division related protein kinase 2 XP_001568787.1 deleted EC_number 2.7.1.37 XP_001568788.1 deleted EC_number 2.7.1.37 XP_001568910.1 mitochondrial ATP-dependent zinc metallopeptidase, putative XP_001569042.1 hs1vu complex proteolytic subunit-like,threonine peptidase, Clan T(1), family T1B XP_001569046.1 zinc carboxypeptidase, putative XP_001569087.1 mitochondrial intermediate peptidase, putative XP_001569165.1 3' end of partial gene, 5' end is on adjacent contig XP_001569166.1 5' end of partial gene, 3' end is on adjacent contig XP_001569293.1 mitogen activated protein kinase homologue XP_001569313.1 2,3-bisphosphoglycerate-independentphosphoglyce ra temutase XP_001569314.1 methyltransferase, putative