-- dump date 20140619_122220 -- class Genbank::CDS -- table cds_note -- id note YP_004578282.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: cly:Celly_0001 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal YP_004578283.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: cat:CA2559_12743 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004578284.1 KEGG: fba:FIC_00643 hypothetical protein YP_004578285.1 PFAM: Tetrapyrrole methylase; KEGG: zpr:ZPR_3592 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004578286.1 KEGG: zpr:ZPR_3593 hypothetical protein YP_004578287.1 KEGG: fps:FP1212 hypothetical protein YP_004578288.1 KEGG: cly:Celly_0005 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like YP_004578289.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_12768 acetyltransferase YP_004578290.1 PFAM: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: fbc:FB2170_13508 diaminopimelate epimerase YP_004578291.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: cat:CA2559_12778 serine protease precursor; SMART: PDZ/DHR/GLGF YP_004578292.1 TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cat:CA2559_12783 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004578293.1 KEGG: cly:Celly_0010 hypothetical protein YP_004578294.1 KEGG: zpr:ZPR_1490 adenosine-deaminase (editase) domain protein YP_004578295.1 KEGG: cat:CA2559_00475 transcriptional regulator, ArsR family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004578296.1 KEGG: cly:Celly_0112 hypothetical protein YP_004578297.1 KEGG: fjo:Fjoh_3082 protein tyrosine phosphatase YP_004578298.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: gfo:GFO_0620 tRNA (guanine-N(1)-)-methyltransferase YP_004578299.1 PFAM: Bacterial transcription activator, effector binding; KEGG: fjo:Fjoh_2178 transcription activator, effector binding YP_004578300.1 TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: cly:Celly_0014 50S ribosomal protein L19; PFAM: Ribosomal protein L19 YP_004578301.1 PFAM: Pentapeptide repeat; KEGG: cly:Celly_1526 pentapeptide repeat protein YP_004578302.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: fbc:FB2170_13543 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type YP_004578305.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: mar:MAE_03780 TPR repeat-containing protein YP_004578307.1 KEGG: wvi:Weevi_0313 hypothetical protein YP_004578308.1 PFAM: Polysaccharide biosynthesis protein; KEGG: nam:NAMH_1666 probable polysaccharide biosynthesis protein YP_004578309.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cly:Celly_0016 TonB-dependent receptor plug YP_004578310.1 KEGG: cat:CA2559_09763 hypothetical protein YP_004578311.1 TIGRFAM: Glucokinase regulatory-like protein; HAMAP: N-acetylmuramic acid 6-phosphate etherase; KEGG: fps:FP0725 N-acetylmuramic acid-6-phosphate etherase; PFAM: Sugar isomerase (SIS) YP_004578312.1 KEGG: cao:Celal_0016 hypothetical protein YP_004578313.1 KEGG: cat:CA2559_09748 hypothetical protein YP_004578314.1 KEGG: cat:CA2559_00815 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding YP_004578315.1 KEGG: cat:CA2559_00820 translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal YP_004578316.1 TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: gfo:GFO_0603 50S ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004578317.1 TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: cly:Celly_2404 50S ribosomal protein L20; PFAM: Ribosomal protein L20 YP_004578318.1 KEGG: cly:Celly_2401 Cof-like hydrolase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_004578319.1 KEGG: fbc:FB2170_10556 adenylate cyclase-like protein YP_004578320.1 KEGG: fbc:FB2170_00025 hypothetical protein; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand YP_004578321.1 KEGG: cao:Celal_2546 hypothetical protein YP_004578322.1 PFAM: Uncharacterised protein family UPF0118; KEGG: mtt:Ftrac_1497 hypothetical protein YP_004578323.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: cao:Celal_2545 primary replicative DNA helicase; SMART: ATPase, AAA+ type, core YP_004578324.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: cao:Celal_2544 acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha YP_004578325.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: fps:FP0612 hypothetical protein YP_004578326.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: gfo:GFO_0597 hypothetical protein YP_004578327.1 PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: gfo:GFO_0596 queuine tRNA-ribosyltransferase YP_004578328.1 KEGG: cly:Celly_0398 transketolase; PFAM: Transketolase, N-terminal YP_004578329.1 KEGG: gfo:GFO_0594 transketolase C-terminal section; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004578330.1 KEGG: fbc:FB2170_00070 hypothetical protein YP_004578331.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: cat:CA2559_00880 hypothetical protein YP_004578332.1 KEGG: cly:Celly_0402 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4 YP_004578333.1 KEGG: gfo:GFO_2406 phosphoribosyltransferase YP_004578334.1 HAMAP: Shikimate kinase; KEGG: ran:Riean_0493 shikimate kinase; PFAM: Shikimate kinase YP_004578335.1 KEGG: fjo:Fjoh_0056 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004578336.1 KEGG: cat:CA2559_00915 CrtI1; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase YP_004578337.1 KEGG: zpr:ZPR_0875 phytoene synthase; PFAM: Squalene/phytoene synthase YP_004578338.1 PFAM: Fatty acid hydroxylase; KEGG: zpr:ZPR_0874 gamma-carotene hydroxylase YP_004578339.1 PFAM: Lycopene beta/epsilon cyclase; KEGG: cat:CA2559_00930 lycopene cyclase YP_004578340.1 PFAM: Redoxin; KEGG: gfo:GFO_2503 thiol-disulfide oxidoreductase YP_004578341.1 KEGG: cly:Celly_2949 hypothetical protein YP_004578342.1 KEGG: mtt:Ftrac_3380 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004578343.1 KEGG: zpr:ZPR_3074 hypothetical protein YP_004578344.1 KEGG: cao:Celal_2442 aconitase; TIGRFAM: Aconitase, mitochondrial-like; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004578345.1 KEGG: cao:Celal_2440 aconitase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_004578347.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: gfo:GFO_2505 MoxR-like AAA family ATPase YP_004578348.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: cat:CA2559_00955 exported peptidyl-prolyl cis-trans isomerase YP_004578349.1 manually curated; KEGG: gfo:GFO_2507 hypothetical protein YP_004578350.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: cat:CA2559_00965 peptidyl-prolyl cis-trans isomerase YP_004578351.1 KEGG: fbc:FB2170_00520 hypothetical protein YP_004578352.1 KEGG: cly:Celly_0470 hypothetical protein YP_004578353.1 KEGG: cly:Celly_2901 hypothetical protein YP_004578354.1 KEGG: cly:Celly_2902 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_004578355.1 KEGG: cly:Celly_2467 hypothetical protein YP_004578356.1 PFAM: GH3 auxin-responsive promoter; KEGG: cao:Celal_1804 gh3 auxin-responsive promoter YP_004578357.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: cat:CA2559_08496 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core YP_004578358.1 KEGG: cly:Celly_0115 hypothetical protein YP_004578359.1 KEGG: gfo:GFO_2511 hypothetical protein YP_004578360.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cly:Celly_0117 TonB-dependent receptor YP_004578361.1 KEGG: cly:Celly_0118 vitamin K-dependent gamma-carboxylase; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM YP_004578362.1 PFAM: Peptidase M75, Imelysin; KEGG: cly:Celly_0119 peptidase M75, imelysin YP_004578363.1 KEGG: cly:Celly_0120 hypothetical protein YP_004578364.1 KEGG: cat:CA2559_08456 hydroxymethylglutaryl-CoA lyase-like protein; PFAM: Pyruvate carboxyltransferase YP_004578365.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: fbc:FB2170_00985 lysine exporter protein LysE/YggA YP_004578366.1 PFAM: Spondin, N-terminal; KEGG: cat:CA2559_04060 elongation factor Ts YP_004578367.1 PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: mtt:Ftrac_1484 dihydroorotate dehydrogenase YP_004578368.1 PFAM: Peptidase M20, dimerisation; Peptidase M20; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; HAMAP: Peptidase T; KEGG: cat:CA2559_08441 peptidase T YP_004578369.1 KEGG: fjo:Fjoh_0500 beta-lactamase YP_004578370.1 KEGG: cly:Celly_0136 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_004578371.1 KEGG: cao:Celal_2828 hypothetical protein YP_004578372.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; KEGG: gfo:GFO_0592 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain YP_004578373.1 TIGRFAM: KpsF/GutQ; KEGG: cat:CA2559_12348 sugar isomerase, KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core YP_004578374.1 KEGG: fbc:FB2170_00555 sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase YP_004578375.1 KEGG: fps:FP1236 hypothetical protein; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_004578376.1 PFAM: ABC transporter-like; KEGG: cly:Celly_0034 Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core YP_004578377.1 PFAM: Integral membrane protein TerC; KEGG: cat:CA2559_10493 hypothetical protein YP_004578378.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cao:Celal_2668 cdp-alcohol phosphatidyltransferase YP_004578379.1 manually curated; KEGG: cat:CA2559_12378 hypothetical protein YP_004578380.1 KEGG: cao:Celal_2667 hypothetical protein YP_004578381.1 KEGG: cat:CA2559_12388 sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase YP_004578382.1 PFAM: Glycosyl transferase, group 1; KEGG: cat:CA2559_12393 glycosyl transferase, group 1 YP_004578383.1 KEGG: cat:CA2559_12398 hypothetical protein YP_004578384.1 PFAM: Glycosyl transferase, group 1; KEGG: cat:CA2559_12403 glycosyl transferase, group 1 YP_004578385.1 PFAM: Glycosyl transferase, group 1; KEGG: cat:CA2559_07340 LPS glycosyltransferase YP_004578386.1 KEGG: fjo:Fjoh_0295 glycosyl transferase; manually curated; PFAM: Glycosyl transferase, family 2 YP_004578387.1 PFAM: Glycosyl transferase, family 2; KEGG: cat:CA2559_07320 hypothetical protein YP_004578388.1 PFAM: Glycosyl transferase, group 1; KEGG: fps:FP1252 glycosyl transferase, group 1 family protein YP_004578389.1 KEGG: fjo:Fjoh_0301 hypothetical protein YP_004578390.1 PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: fjo:Fjoh_0302 membrane bound O-acyl transferase, MBOAT family protein YP_004578391.1 PFAM: Glycosyl transferase, family 2; KEGG: chu:CHU_3003 b-glycosyltransferase YP_004578392.1 PFAM: Glycosyl transferase, group 1; KEGG: tte:TTE0949 glycosyltransferase YP_004578393.1 KEGG: gfo:GFO_0574 hypothetical protein YP_004578394.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; KEGG: fjo:Fjoh_0304 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004578395.1 KEGG: fps:FP1256 sialic acid synthase (N-acetylneuraminic acid synthetase); TIGRFAM: N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain YP_004578396.1 manually curated; KEGG: fps:FP1257 N-acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase YP_004578398.1 KEGG: sen:SACE_0653 hypothetical protein YP_004578399.1 PFAM: Glycosyl transferase, family 2; KEGG: fps:FP1258 glycosyl transferase, group 2 family protein YP_004578400.1 KEGG: fjo:Fjoh_0311 hypothetical protein YP_004578401.1 PFAM: Glycosyl transferase, family 2; KEGG: fjo:Fjoh_0314 glycosyl transferase YP_004578402.1 PFAM: Glycosyl transferase, family 2; KEGG: sbl:Sbal_0065 glycosyl transferase YP_004578403.1 KEGG: syn:sll0625 hypothetical protein YP_004578404.1 KEGG: cat:CA2559_07240 xanthan biosynthesis pyruvyltransferase GumL YP_004578405.1 PFAM: ABC transporter-like; KEGG: fjo:Fjoh_0325 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004578406.1 PFAM: ABC-2 type transporter; KEGG: gfo:GFO_0542 O-antigen export system permease YP_004578408.1 KEGG: cat:CA2559_12968 hypothetical protein YP_004578409.1 KEGG: hmg:100202205 similar to UDP-glucuronate decarboxylase 1; PFAM: NAD-dependent epimerase/dehydratase YP_004578410.1 KEGG: gfo:GFO_0540 Ptk-like tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein YP_004578411.1 KEGG: fjo:Fjoh_0361 polysaccharide export protein YP_004578412.1 KEGG: cly:Celly_0037 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004578413.1 KEGG: fps:FP0585 hypothetical protein YP_004578414.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: cat:CA2559_09091 hypothetical protein; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type YP_004578415.1 KEGG: gfo:GFO_0531 hypothetical protein YP_004578416.1 TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: cat:CA2559_09101 translocase; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; SecA Wing/Scaffold YP_004578417.1 KEGG: eli:ELI_07040 hypothetical protein YP_004578418.1 PFAM: Peptidase M23; KEGG: cat:CA2559_09121 enzyme with aminotransferase class-III domain protein YP_004578419.1 KEGG: gfo:GFO_0522 secreted protein YP_004578420.1 KEGG: fbc:FB2170_00690 hypothetical protein YP_004578421.1 KEGG: fbc:FB2170_00695 RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004578422.1 KEGG: gfo:GFO_0519 hypothetical protein YP_004578423.1 KEGG: fjo:Fjoh_5021 LAO/AO transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein YP_004578424.1 PFAM: Glycosyl transferase, family 2; KEGG: cly:Celly_0056 family 2 glycosyl transferase YP_004578425.1 PFAM: Lipid A biosynthesis, N-terminal; KEGG: zpr:ZPR_1071 transport-related, hypothetical protein YP_004578426.1 KEGG: wvi:Weevi_1832 phosphoesterase PA-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase YP_004578427.1 KEGG: cat:CA2559_09161 hypothetical protein YP_004578428.1 KEGG: cly:Celly_0060 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE YP_004578429.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cat:CA2559_01560 alpha/beta hydrolase superfamily protein YP_004578430.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: fps:FP1762 dioxygenase YP_004578431.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: cat:CA2559_00980 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_004578432.1 KEGG: fba:FIC_01419 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain YP_004578433.1 KEGG: cat:CA2559_00975 hypothetical protein YP_004578434.1 TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal; HAMAP: Membrane protein oxaA; KEGG: fbc:FB2170_15836 inner membrane protein translocase component YidC; PFAM: Membrane insertion protein, OxaA/YidC YP_004578435.1 PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: gfo:GFO_2218 CTP synthetase YP_004578436.1 KEGG: cly:Celly_1528 hypothetical protein YP_004578437.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: cly:Celly_1433 LysR family transcriptional regulator YP_004578438.1 PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: cly:Celly_1432 hypothetical protein YP_004578439.1 KEGG: fjo:Fjoh_2382 hypothetical protein YP_004578440.1 KEGG: cao:Celal_2630 hypothetical protein YP_004578441.1 KEGG: cat:CA2559_01000 LysM-repeat domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004578442.1 PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: cly:Celly_0225 GMP synthase (glutamine-hydrolyzing) YP_004578443.1 KEGG: cly:Celly_0227 hypothetical protein; HAMAP: UPF0747 protein; PFAM: Uncharacterised conserved protein UCP012535 YP_004578444.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: gfo:GFO_2238 radical SAM superfamily protein, UPF0004; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_004578445.1 KEGG: zpr:ZPR_1245 glutamyl-tRNA(Gln) amidotransferase subunit A; PFAM: Amidase YP_004578446.1 PFAM: Beta-lactamase-related; KEGG: fjo:Fjoh_4979 beta-lactamase YP_004578447.1 SMART: Fibronectin, type III; KEGG: cao:Celal_3120 fibronectin type III domain protein YP_004578448.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: fbc:FB2170_15926 recognition particle-docking protein; SMART: ATPase, AAA+ type, core YP_004578449.1 KEGG: fjo:Fjoh_4981 hypothetical protein YP_004578450.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: zpr:ZPR_1242 50S ribosomal protein L33; PFAM: Ribosomal protein L33 YP_004578451.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: zpr:ZPR_1241 50S ribosomal protein L28; PFAM: Ribosomal protein L28 YP_004578452.1 KEGG: fbc:FB2170_15946 competence-damage inducible; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding YP_004578453.1 KEGG: zpr:ZPR_1239 hypothetical protein YP_004578454.1 PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: cat:CA2559_13578 hydrolase YP_004578455.1 KEGG: cat:CA2559_13583 DNA polymerase III epsilon chain; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease YP_004578456.1 PFAM: Glutaredoxin; KEGG: cat:CA2559_13588 hypothetical protein YP_004578457.1 KEGG: cao:Celal_2489 3-oxoacyl-ACP reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004578458.1 KEGG: cly:Celly_2825 hypothetical protein YP_004578459.1 PFAM: esterase; KEGG: psm:PSM_A1554 hypothetical protein YP_004578460.1 manually curated; KEGG: cat:CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004578461.1 PFAM: Glycosyl transferase, family 2; KEGG: fps:FP0589 glycosyl transferase, group 2 family protein YP_004578462.1 TIGRFAM: RecR protein; HAMAP: Recombination protein recR; KEGG: cao:Celal_2420 recombination protein RecR; SMART: Toprim domain, subgroup YP_004578463.1 PFAM: Sodium/solute symporter; KEGG: gfo:GFO_2252 sodium:solute symporter family protein YP_004578464.1 KEGG: cat:CA2559_07570 hypothetical protein YP_004578465.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cao:Celal_2418 TonB-dependent receptor YP_004578466.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: cao:Celal_2415 3-oxoacyl-ACP synthase 3 YP_004578467.1 PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: cly:Celly_0492 heat shock protein HSP90 YP_004578468.1 PFAM: Protein of unknown function DUF161; KEGG: ant:Arnit_1987 hypothetical protein YP_004578469.1 KEGG: gfo:GFO_2289 hypothetical protein YP_004578470.1 TIGRFAM: Pyruvate carboxylase; KEGG: cly:Celly_0558 pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Biotin/lipoyl attachment YP_004578471.1 KEGG: pdi:BDI_0258 hypothetical protein YP_004578472.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cat:CA2559_06310 hypothetical protein YP_004578473.1 KEGG: fjo:Fjoh_2153 hypothetical protein YP_004578474.1 KEGG: cat:CA2559_12303 hypothetical protein; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3 YP_004578475.1 TIGRFAM: Malate synthase A; KEGG: cat:CA2559_12308 malate synthase; PFAM: Malate synthase-like, core YP_004578476.1 KEGG: cat:CA2559_12313 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase YP_004578479.1 KEGG: cly:Celly_0379 hypothetical protein YP_004578480.1 KEGG: fjo:Fjoh_4573 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004578481.1 PFAM: Protein of unknown function DUF885, bacterial; KEGG: cao:Celal_2405 hypothetical protein YP_004578482.1 manually curated; KEGG: cao:Celal_3281 hypothetical protein YP_004578483.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: cat:CA2559_08776 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS YP_004578484.1 PFAM: Ferric-uptake regulator; KEGG: cly:Celly_0278 Fur family ferric uptake regulator YP_004578485.1 KEGG: cly:Celly_0279 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase YP_004578486.1 KEGG: zpr:ZPR_1671 hypothetical protein YP_004578487.1 KEGG: cat:CA2559_06750 ornithine aminotransferase; PFAM: Aminotransferase class-III YP_004578488.1 PFAM: Tetratricopeptide TPR-1; KEGG: cat:CA2559_06745 TPR repeat protein YP_004578489.1 PFAM: Protein of unknown function DUF368; KEGG: cly:Celly_0283 hypothetical protein YP_004578490.1 PFAM: Protein of unknown function DUF368; KEGG: fbc:FB2170_09251 hypothetical protein YP_004578491.1 KEGG: cat:CA2559_06730 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_004578492.1 PFAM: Protein of unknown function DUF349; KEGG: zpr:ZPR_1665 hypothetical protein YP_004578493.1 KEGG: cao:Celal_2638 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, catalytic core YP_004578494.1 KEGG: cly:Celly_0074 hypothetical protein YP_004578495.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: cat:CA2559_06160 peptide deformylase YP_004578496.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: cao:Celal_0308 holliday junction resolvase; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like YP_004578497.1 KEGG: cao:Celal_0309 2,3,4,5-tetrahydropyridine-2,6-dicarboxylaten-su ccinyltransferase YP_004578498.1 PFAM: Glycosyl transferase, family 9; KEGG: zpr:ZPR_3099 RfaF-like lipopolysaccharide core biosynthesis glycosyl transferase YP_004578499.1 PFAM: Glycosyl transferase, family 2; KEGG: cao:Celal_2801 glycosyl transferase family 2 YP_004578500.1 PFAM: Glycosyl transferase, family 2; KEGG: cao:Celal_0312 glycosyl transferase family 2 YP_004578501.1 KEGG: fjo:Fjoh_2518 hypothetical protein YP_004578502.1 PFAM: Glycosyl transferase, family 2; KEGG: gfo:GFO_2279 glycosyl transferase YP_004578503.1 KEGG: fjo:Fjoh_2516 hypothetical protein YP_004578504.1 KEGG: fps:FP1637 hypothetical protein YP_004578505.1 PFAM: Glycosyl transferase, group 1; KEGG: shg:Sph21_2438 glycosyl transferase family 2 YP_004578506.1 KEGG: mci:Mesci_5566 ExoV; pyruvyltransferase YP_004578507.1 KEGG: cao:Celal_0314 translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal YP_004578508.1 PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: cat:CA2559_06110 tRNA nucleotidyltransferase YP_004578509.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cao:Celal_4272 gcn5-related N-acetyltransferase YP_004578510.1 PFAM: Cytochrome oxidase assembly; KEGG: gfo:GFO_2284 cytochrome oxidase assembly protein YP_004578511.1 KEGG: cat:CA2559_00805 hypothetical protein YP_004578512.1 PFAM: ABC transporter-like; KEGG: cly:Celly_0095 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004578513.1 KEGG: fbc:FB2170_00895 excinuclease ABC subunit B YP_004578514.1 KEGG: fps:FP2310 hypothetical protein YP_004578515.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004578516.1 KEGG: cat:CA2559_06070 hypothetical protein YP_004578517.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004578518.1 KEGG: cat:CA2559_06075 hypothetical protein YP_004578519.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: cao:Celal_0328 uvrabc system protein B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein YP_004578520.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rbi:RB2501_10697 hypothetical protein YP_004578521.1 KEGG: rbi:RB2501_11392 hypothetical protein YP_004578522.1 PFAM: Protein of unknown function DUF1456; KEGG: cat:CA2559_00810 hypothetical protein YP_004578523.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: zpr:ZPR_1645 succinyl-CoA synthetase beta chain YP_004578524.1 KEGG: rbi:RB2501_05130 hypothetical protein YP_004578525.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: cat:CA2559_08531 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004578526.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; KEGG: cly:Celly_1090 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif YP_004578527.1 KEGG: zpr:ZPR_1891 response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004578528.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fbc:FB2170_14208 bleomycin resistance protein YP_004578529.1 PFAM: Peptidase M28; KEGG: cat:CA2559_12058 peptidase, M28D family protein YP_004578530.1 KEGG: cly:Celly_0138 polyphosphate:nucleotide phosphotransferase, PPK2 family; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2 YP_004578531.1 KEGG: cao:Celal_0367 two component, sigma54 specific, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core YP_004578532.1 KEGG: cat:CA2559_08276 hypothetical protein YP_004578533.1 PFAM: Mechanosensitive ion channel MscS; KEGG: cat:CA2559_08271 hypothetical protein YP_004578534.1 KEGG: cat:CA2559_08266 ABC transporter, permease YP_004578535.1 PFAM: ABC transporter-like; KEGG: gfo:GFO_0506 ABC-type transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004578536.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: gfo:GFO_0505 chaperone DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region YP_004578537.1 KEGG: cly:Celly_0334 protein GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor YP_004578538.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: gfo:GFO_0503 membrane or secreted YceI-like family protein YP_004578539.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: fps:FP0672 nucleoside-diphosphate sugar epimerase YP_004578540.1 PFAM: Protein of unknown function DUF752; KEGG: gfo:GFO_0501 hypothetical protein YP_004578541.1 KEGG: cly:Celly_0336 hypothetical protein YP_004578542.1 TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: cat:CA2559_07060 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV YP_004578543.1 PFAM: Protein of unknown function DUF2166; KEGG: cat:CA2559_07030 hypothetical protein YP_004578544.1 KEGG: fps:FP1743 hypothetical protein YP_004578545.1 PFAM: Bacterial transcription activator, effector binding; Polyketide cyclase/dehydrase; KEGG: cat:CA2559_07010 hypothetical protein YP_004578546.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: gfo:GFO_0495 CrcB-like protein; PFAM: Camphor resistance CrcB protein YP_004578547.1 PFAM: Protein of unknown function DUF1684; KEGG: gfo:GFO_0491 hypothetical protein YP_004578548.1 PFAM: Major facilitator superfamily MFS-1; KEGG: fbc:FB2170_01207 integral membrane transport protein YP_004578549.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fbc:FB2170_00650 glyoxalase/dioxygenase superfamily protein YP_004578550.1 TIGRFAM: CocE/NonD hydrolase; KEGG: cat:CA2559_08881 alpha-amino acid ester hydrolase YP_004578551.1 PFAM: ThiJ/PfpI; KEGG: cly:Celly_0348 ThiJ/PfpI domain-containing protein YP_004578552.1 PFAM: RES; KEGG: gfo:GFO_2680 hypothetical protein YP_004578553.1 KEGG: gfo:GFO_2681 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02293; PFAM: Conserved hypothetical protein CHP02293 YP_004578554.1 KEGG: aoe:Clos_1093 RNA polymerase sigma factor SigZ; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004578555.1 KEGG: cat:CA2559_06945 probable transcription regulator protein; PFAM: Transcription regulator, AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator, AsnC-type YP_004578556.1 KEGG: gfo:GFO_0485 hypothetical protein YP_004578557.1 TIGRFAM: Methylmalonyl-CoA mutase, C-terminal; KEGG: cat:CA2559_06870 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; ArgK protein YP_004578558.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: cly:Celly_0354 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT YP_004578559.1 KEGG: fbc:FB2170_01242 hypothetical protein YP_004578561.1 PFAM: Periplasmic binding protein; KEGG: fps:FP0538 ABC transporter binding protein YP_004578562.1 TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core; KEGG: cly:Celly_0387 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core YP_004578563.1 TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: cly:Celly_0388 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor YP_004578565.1 KEGG: gfo:GFO_3471 hypothetical protein YP_004578566.1 KEGG: cly:Celly_0394 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal YP_004578567.1 KEGG: fjo:Fjoh_2352 fibronectin, type III domain-containing protein YP_004578568.1 PFAM: Curli production assembly/transport component CsgG; KEGG: fjo:Fjoh_2351 curli production assembly/transport component CsgG YP_004578569.1 PFAM: Curli production assembly/transport component CsgF; KEGG: fjo:Fjoh_2350 hypothetical protein YP_004578570.1 PFAM: Curli assembly protein CsgE; KEGG: fba:FIC_01313 hypothetical protein YP_004578571.1 KEGG: fjo:Fjoh_2347 hypothetical protein YP_004578572.1 PFAM: Curlin associated; KEGG: svo:SVI_2693 hypothetical protein YP_004578573.1 PFAM: Curlin associated; KEGG: spl:Spea_3235 curlin-associated protein YP_004578574.1 PFAM: Glutamine synthetase, catalytic region; KEGG: zpr:ZPR_3154 glutamine synthetase YP_004578575.1 KEGG: cao:Celal_0405 glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp YP_004578576.1 KEGG: cat:CA2559_07505 sodium/calcium exchanger; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region YP_004578577.1 PFAM: Endonuclease I; KEGG: cat:CA2559_06200 YurI YP_004578578.1 manually curated; KEGG: gfo:GFO_0465 hypothetical protein YP_004578579.1 KEGG: fbc:FB2170_02010 hypothetical protein YP_004578580.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cly:Celly_2059 heavy metal transport/detoxification protein YP_004578581.1 KEGG: zpr:ZPR_3378 metal transport-related, protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004578582.1 PFAM: Protein of unknown function DUF305; KEGG: zpr:ZPR_4238 hypothetical protein YP_004578583.1 PFAM: Cation efflux protein; KEGG: prw:PsycPRwf_0699 cation efflux protein YP_004578584.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: cat:CA2559_11723 heavy-metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase YP_004578585.1 KEGG: cly:Celly_2057 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004578586.1 KEGG: zpr:ZPR_4254 hypothetical protein YP_004578587.1 KEGG: cao:Celal_3907 hypothetical protein YP_004578588.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2; KEGG: zpr:ZPR_3384 multicopper oxidase YP_004578589.1 PFAM: Outer membrane efflux protein; KEGG: cao:Celal_3905 outer membrane efflux protein YP_004578590.1 PFAM: Acriflavin resistance protein; KEGG: rbi:RB2501_04740 copper/silver resistance-related transport membrane protein YP_004578591.1 KEGG: cao:Celal_3903 hypothetical protein YP_004578592.1 TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: cly:Celly_3222 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase YP_004578593.1 KEGG: mtt:Ftrac_1226 hypothetical protein YP_004578594.1 PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; KEGG: cat:CA2559_11673 probable copper-transporting ATPase YP_004578595.1 KEGG: cly:Celly_3221 hypothetical protein YP_004578596.1 PFAM: Ferric-uptake regulator; KEGG: cly:Celly_3220 Fur family transcriptional regulator protein YP_004578597.1 PFAM: Cation efflux protein; KEGG: cat:CA2559_11683 integral membrane protein YP_004578598.1 KEGG: cly:Celly_3219 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004578599.1 KEGG: cly:Celly_3218 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein; Outer membrane efflux protein YP_004578600.1 KEGG: fjo:Fjoh_3348 hypothetical protein YP_004578601.1 KEGG: dfe:Dfer_5170 hypothetical protein YP_004578604.1 KEGG: fps:FP0627 hypothetical protein YP_004578606.1 KEGG: sli:Slin_3282 hypothetical protein YP_004578607.1 PFAM: Integrase, catalytic core, phage; KEGG: cat:CA2559_03935 integrase YP_004578608.1 KEGG: cat:CA2559_09146 organic hydroperoxide resistance protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein YP_004578609.1 PFAM: Adaptor protein ClpS, core; KEGG: gfo:GFO_0434 ATP-dependent Clp protease adaptor protein YP_004578610.1 KEGG: cao:Celal_0477 hypothetical protein YP_004578611.1 PFAM: Ribosomal L11 methyltransferase; KEGG: cao:Celal_0478 (lsu ribosomal protein l11p)-lysine N-methyltransferase YP_004578612.1 TIGRFAM: Triosephosphate isomerase; KEGG: coc:Coch_0100 triosephosphate isomerase; PFAM: Triosephosphate isomerase YP_004578613.1 KEGG: cat:CA2559_13493 peptide ABC transporter, permease; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004578614.1 PFAM: DoxX; KEGG: cat:CA2559_13498 hypothetical protein YP_004578615.1 PFAM: Protein of unknown function DUF1599; KEGG: fbc:FB2170_01642 hypothetical protein YP_004578616.1 TIGRFAM: Dihydropteroate synthase; KEGG: cly:Celly_2320 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS YP_004578617.1 KEGG: cly:Celly_2319 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00159; PFAM: DNA integrity scanning protein, DisA, N-terminal YP_004578618.1 KEGG: cao:Celal_0484 hypothetical protein YP_004578619.1 PFAM: ABC transporter, transmembrane region; ABC transporter-like; KEGG: cat:CA2559_13518 ATPase; SMART: ATPase, AAA+ type, core YP_004578620.1 PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: cly:Celly_2316 tRNA pseudouridine synthase A YP_004578621.1 PFAM: Metallophosphoesterase; KEGG: cly:Celly_2315 metallophosphoesterase YP_004578622.1 KEGG: zpr:ZPR_0971 hypothetical protein YP_004578623.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: cat:CA2559_01045 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core YP_004578624.1 TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: gfo:GFO_2731 30S ribosomal protein S20; PFAM: Ribosomal protein S20 YP_004578625.1 PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; TIGRFAM: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; HAMAP: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; KEGG: cat:CA2559_01055 prolyl-tRNA synthetase YP_004578626.1 KEGG: cao:Celal_0497 prolyl-tRNA synthetase YP_004578627.1 PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: gfo:GFO_2738 hypothetical protein YP_004578628.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC; PFAM: PKD; CUB; SMART: PKD; CUB YP_004578630.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: cat:CA2559_00785 GTP cyclohydrolase I YP_004578631.1 TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: cly:Celly_2301 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR YP_004578632.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: cao:Celal_0503 hypothetical protein; PFAM: Protein of unknown function DUF37 YP_004578633.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: fjo:Fjoh_2266 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase YP_004578634.1 PFAM: Protein of unknown function DUF192; KEGG: cao:Celal_0505 hypothetical protein YP_004578635.1 KEGG: lby:Lbys_0618 hypothetical protein YP_004578636.1 KEGG: zpr:ZPR_3791 bifunctional preprotein translocase subunit SecD/SecF; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; SecF protein; PFAM: SecD/SecF/SecDF export membrane protein YP_004578638.1 KEGG: ipo:Ilyop_2294 hypothetical protein YP_004578639.1 HAMAP: Malate dehydrogenase, NAD-dependent; KEGG: cly:Celly_2294 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004578640.1 KEGG: cly:Celly_2292 hypothetical protein YP_004578641.1 SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: gfo:GFO_2749 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal YP_004578642.1 TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: cly:Celly_2290 asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II YP_004578643.1 PFAM: Radical SAM; KEGG: cat:CA2559_06800 hypothetical protein YP_004578644.1 KEGG: fjo:Fjoh_3297 hypothetical protein YP_004578645.1 PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, KEGG: cly:Celly_2192 hypothetical protein YP_004578646.1 KEGG: cat:CA2559_06785 hypothetical protein YP_004578647.1 PFAM: Protein of unknown function DUF161; Protein of unknown function DUF2179; KEGG: ppn:Palpr_0469 hypothetical protein YP_004578648.1 PFAM: Cupin 2, conserved barrel; KEGG: cly:Celly_2194 cupin 2 barrel domain-containing protein YP_004578649.1 KEGG: cao:Celal_0578 alpha/beta hydrolase fold protein YP_004578650.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: gfo:GFO_2790 ribosomal large subunit pseudouridine synthase F; SMART: RNA-binding S4 YP_004578651.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cao:Celal_0579 glyoxalase/bleomycin resistance protein/dioxygenase YP_004578652.1 KEGG: mtt:Ftrac_2779 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02206, TP0381; PFAM: Conserved hypothetical protein CHP02206, TP0381 YP_004578653.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: fbc:FB2170_02300 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004578654.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: cly:Celly_2185 signal recognition particle protein; SMART: ATPase, AAA+ type, core YP_004578655.1 KEGG: cly:Celly_2184 hypothetical protein YP_004578656.1 KEGG: fjo:Fjoh_0160 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004578657.1 PFAM: FecR protein; KEGG: cao:Celal_0585 anti-FecI sigma factor, FecR YP_004578658.1 PFAM: TonB-dependent receptor, plug; KEGG: cao:Celal_0586 outer membrane protein YP_004578659.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ant:Arnit_0722 major facilitator superfamily protein YP_004578660.1 PFAM: Amidinotransferase; KEGG: fps:FP1307 amidinotransferase YP_004578661.1 KEGG: cat:CA2559_05880 citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like YP_004578662.1 PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: cao:Celal_0597 enolase YP_004578663.1 TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: cly:Celly_2174 carbamoyl-phosphate synthase small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl phosphate synthase, small subunit, N-terminal YP_004578664.1 TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: cat:CA2559_05855 50S ribosomal protein L17; PFAM: Ribosomal protein L17 YP_004578665.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: zpr:ZPR_3850 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal YP_004578666.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: zpr:ZPR_3851 30S ribosomal protein S4; SMART: RNA-binding S4 YP_004578667.1 KEGG: cly:Celly_2170 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11 YP_004578668.1 KEGG: gfo:GFO_2817 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13 YP_004578669.1 PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: fbc:FB2170_02410 50S ribosomal protein L36; HAMAP: Ribosomal protein L36 YP_004578670.1 TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: gfo:GFO_2818 translation initiation factor IF-1; PFAM: S1, IF1 type YP_004578671.1 KEGG: zpr:ZPR_3855 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein YP_004578672.1 KEGG: zpr:ZPR_3856 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15 YP_004578673.1 KEGG: gfo:GFO_2821 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region YP_004578674.1 KEGG: cly:Celly_2163 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal YP_004578675.1 KEGG: zpr:ZPR_3859 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5 YP_004578676.1 KEGG: fbc:FB2170_02445 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain YP_004578677.1 PFAM: Ribosomal protein S8; KEGG: gfo:GFO_2825 30S ribosomal protein S8 YP_004578678.1 KEGG: fbc:FB2170_02455 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14 YP_004578679.1 PFAM: Ribosomal protein L5; KEGG: fps:FP1327 50S ribosomal protein L5 YP_004578680.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: gfo:GFO_2828 50S ribosomal protein L24; SMART: KOW YP_004578681.1 KEGG: zpr:ZPR_3865 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e YP_004578682.1 KEGG: cly:Celly_2155 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17 YP_004578683.1 KEGG: gfo:GFO_2831 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29 YP_004578684.1 TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: coc:Coch_1154 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004578685.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: zpr:ZPR_3869 30S ribosomal protein S3; SMART: K Homology YP_004578686.1 KEGG: gfo:GFO_2834 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17 YP_004578687.1 KEGG: cat:CA2559_05735 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15 YP_004578688.1 KEGG: fps:FP1336 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2 YP_004578689.1 PFAM: Ribosomal protein L25/L23; KEGG: zpr:ZPR_3873 50S ribosomal protein L23 YP_004578690.1 PFAM: Ribosomal protein L4/L1e; KEGG: nve:NEMVE_v1g156663 hypothetical protein YP_004578691.1 KEGG: zpr:ZPR_3875 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3 YP_004578692.1 KEGG: cat:CA2559_05710 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10, bacterial; PFAM: Ribosomal protein S10 YP_004578693.1 KEGG: cly:Celly_2144 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal YP_004578694.1 KEGG: fbc:FB2170_02535 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7 YP_004578695.1 KEGG: zpr:ZPR_3879 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23 YP_004578696.1 PFAM: Bacterial surface antigen (D15); KEGG: cat:CA2559_05690 30S ribosomal protein S12 YP_004578697.1 PFAM: TonB-dependent receptor, plug; KEGG: cat:CA2559_05670 outer membrane protein YP_004578698.1 KEGG: cat:CA2559_05665 hypothetical protein YP_004578699.1 KEGG: cat:CA2559_05660 hypothetical protein YP_004578700.1 KEGG: cat:CA2559_05655 hypothetical protein YP_004578701.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: gfo:GFO_2922 TonB-dependent outer membrane receptor YP_004578702.1 PFAM: RagB/SusD; KEGG: gfo:GFO_2921 SusD/RagB family protein YP_004578703.1 KEGG: gfo:GFO_2920 secreted protein YP_004578705.1 KEGG: cao:Celal_0634 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding YP_004578706.1 PFAM: Peptidase S54, rhomboid; KEGG: zpr:ZPR_3887 rhomboid family protein YP_004578707.1 KEGG: fps:FP1349 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core YP_004578708.1 PFAM: Peptidase M10A/M12B, matrixin/adamalysin; KEGG: cat:CA2559_01750 hypothetical protein YP_004578709.1 KEGG: fbc:FB2170_02585 hypothetical protein YP_004578710.1 KEGG: fjo:Fjoh_0412 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_004578711.1 KEGG: cao:Celal_0641 hypothetical protein YP_004578712.1 KEGG: zpr:ZPR_3892 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like YP_004578713.1 KEGG: cao:Celal_0643 hypothetical protein YP_004578714.1 PFAM: Negative transcriptional regulator; KEGG: cat:CA2559_05600 negative transcriptional regulator YP_004578715.1 TIGRFAM: Gliding motility-associated protein, GldC; KEGG: cat:CA2559_06575 hypothetical protein YP_004578716.1 TIGRFAM: Gliding motility-associated lipoprotein, GldB; KEGG: cao:Celal_2202 gliding motility protein gldb YP_004578717.1 KEGG: fjo:Fjoh_1792 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase YP_004578718.1 KEGG: rbi:RB2501_02955 regulatory protein, LuxR:response regulator receiver; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004578719.1 KEGG: fbc:FB2170_17016 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain YP_004578723.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cao:Celal_3582 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen YP_004578724.1 KEGG: cly:Celly_2000 hypothetical protein YP_004578725.1 KEGG: cat:CA2559_06610 hypothetical protein YP_004578726.1 KEGG: cat:CA2559_06615 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004578727.1 manually curated; KEGG: gfo:GFO_0354 polyprenyl synthetase; PFAM: Polyprenyl synthetase YP_004578728.1 KEGG: cat:CA2559_05425 hypothetical protein YP_004578729.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: cat:CA2559_07736 hypothetical protein; PFAM: Radical SAM YP_004578730.1 TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: gfo:GFO_0352 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004578731.1 HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: fps:FP0241 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core YP_004578732.1 PFAM: NTP pyrophosphohydrolase MazG, catalytic core; KEGG: fps:FP0242 hypothetical protein YP_004578733.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: fps:FP0247 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004578734.1 TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: zpr:ZPR_3523 ribosome-associated GTPase; PFAM: GTPase EngC YP_004578735.1 KEGG: cly:Celly_1986 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II YP_004578736.1 KEGG: cao:Celal_2183 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_004578737.1 KEGG: fjo:Fjoh_0516 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II YP_004578738.1 KEGG: fjo:Fjoh_0517 prephenate dehydratase; PFAM: Prephenate dehydratase YP_004578739.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA; KEGG: fjo:Fjoh_1516 ABC transporter related; PFAM: ABC transporter-like YP_004578740.1 KEGG: cao:Celal_2179 hypothetical protein YP_004578741.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: fbc:FB2170_17121 hypothetical protein YP_004578742.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: cao:Celal_2169 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2 YP_004578743.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: cao:Celal_2168 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase YP_004578744.1 PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: cat:CA2559_06005 possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase YP_004578745.1 PFAM: Protein of unknown function DUF2061, membrane; KEGG: cao:Celal_2166 hypothetical protein YP_004578746.1 KEGG: cat:CA2559_05995 transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2 YP_004578747.1 PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: fjo:Fjoh_1489 S-adenosylmethionine synthetase YP_004578748.1 KEGG: gfo:GFO_2344 hypothetical protein YP_004578749.1 KEGG: cly:Celly_1962 hypothetical protein YP_004578750.1 PFAM: Protein of unknown function, Porph ging; KEGG: cat:CA2559_10573 hypothetical protein YP_004578751.1 PFAM: Protein of unknown function, Porph ging; KEGG: mtt:Ftrac_1669 hypothetical protein YP_004578753.1 KEGG: mtt:Ftrac_1670 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004578754.1 KEGG: mtt:Ftrac_1671 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004578755.1 KEGG: cat:CA2559_03280 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004578756.1 KEGG: cat:CA2559_03275 two-component system, transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004578757.1 KEGG: cat:CA2559_03270 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III YP_004578758.1 KEGG: cat:CA2559_03265 hypothetical protein YP_004578759.1 KEGG: cat:CA2559_05955 hypothetical protein YP_004578760.1 KEGG: fbc:FB2170_17221 deoxynucleoside kinase subfamily; PFAM: Deoxynucleoside kinase YP_004578761.1 TIGRFAM: polyphosphate kinase 1; KEGG: cly:Celly_1873 polyphosphate kinase 1; PFAM: Polyphosphate kinase YP_004578762.1 KEGG: vfm:VFMJ11_A0633 hypothetical protein YP_004578763.1 PFAM: Protein of unknown function DUF2183; KEGG: cao:Celal_2156 hypothetical protein YP_004578764.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: cao:Celal_2155 pyrophosphate-energized proton pump YP_004578765.1 KEGG: rbi:RB2501_02515 Zn-dependent aminopeptidase YP_004578766.1 KEGG: fbc:FB2170_16596 hypothetical protein YP_004578767.1 KEGG: cao:Celal_2284 hypothetical protein YP_004578768.1 KEGG: cat:CA2559_09683 hypothetical protein YP_004578769.1 KEGG: fjo:Fjoh_1768 peptidase E; PFAM: Peptidase S51, dipeptidase E YP_004578770.1 KEGG: rbi:RB2501_02025 hypothetical protein YP_004578771.1 KEGG: cly:Celly_0613 hypothetical protein YP_004578772.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_0419 GNAT family acetyltransferase YP_004578773.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_09653 acetyltransferase YP_004578774.1 PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: cat:CA2559_09648 D-alanyl-D-alanine carboxypeptidase YP_004578775.1 PFAM: Peptidase M48, Ste24p; KEGG: cly:Celly_0616 peptidase M48 Ste24p YP_004578776.1 PFAM: Ankyrin repeat; KEGG: cly:Celly_0618 ankyrin YP_004578777.1 KEGG: fps:FP2135 phosphoglyceromutase; manually curated; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YP_004578778.1 KEGG: wvi:Weevi_0632 hypothetical protein YP_004578779.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: cao:Celal_2268 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain YP_004578780.1 PFAM: Methyltransferase type 11; KEGG: fps:FP0418 methyltransferase YP_004578781.1 PFAM: Protein of unknown function DUF423; KEGG: cao:Celal_1778 hypothetical protein YP_004578782.1 PFAM: ApbE-like lipoprotein; KEGG: gfo:GFO_0408 thiamine biosynthesis lipoprotein YP_004578783.1 KEGG: cat:CA2559_12128 Na(+)-translocating NADH-quinone reductase subunit F YP_004578784.1 KEGG: fjo:Fjoh_2887 hypothetical protein YP_004578785.1 TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; KEGG: cly:Celly_0627 NADH:ubiquinone oxidoreductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region YP_004578786.1 KEGG: fbc:FB2170_16701 NADH:ubiquinone oxidoreductase, Na translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; PFAM: Electron transport complex, Rnf/Nqr YP_004578787.1 KEGG: fbc:FB2170_16706 NADH-ubiquinone oxidoreductase; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; PFAM: Electron transport complex, Rnf/Nqr YP_004578788.1 KEGG: fbc:FB2170_16711 Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; PFAM: FMN-binding YP_004578789.1 KEGG: cat:CA2559_12158 Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; PFAM: NADH-quinone reductase NQR2/RnfD YP_004578790.1 TIGRFAM: Na-translocating NADH-quinone reductase subunit A; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; KEGG: cly:Celly_0632 NADH:ubiquinone oxidoreductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A YP_004578791.1 KEGG: cat:CA2559_12168 hypothetical protein YP_004578792.1 PFAM: ApaG; KEGG: rbi:RB2501_02645 ApaG YP_004578793.1 KEGG: cat:CA2559_12183 hypothetical protein YP_004578794.1 KEGG: cat:CA2559_12188 hypothetical protein YP_004578795.1 TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; KEGG: cly:Celly_0635 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004578796.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: zpr:ZPR_0941 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G YP_004578797.1 KEGG: cao:Celal_2252 linoleoyl-CoA desaturase; PFAM: Fatty acid desaturase, type 1 YP_004578798.1 KEGG: zpr:ZPR_0939 aspartate aminotransferase; PFAM: Aminotransferase, class I/II YP_004578800.1 PFAM: Cation transporter; KEGG: gfo:GFO_0390 trk system potassium uptake protein YP_004578801.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: gfo:GFO_0389 potassium transporter peripheral membrane component YP_004578802.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: fjo:Fjoh_1467 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004578803.1 KEGG: cat:CA2559_12253 PorT protein YP_004578804.1 PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: fps:FP0325 tRNA/rRNA methyltransferase YP_004578805.1 PFAM: Bacterial surface antigen (D15); KEGG: cat:CA2559_12263 hypothetical protein YP_004578806.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: fbc:FB2170_16791 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II YP_004578807.1 TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: lby:Lbys_2319 peptide deformylase; PFAM: Formylmethionine deformylase YP_004578808.1 PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-3; Signal transduction response regulator, receiver region; KEGG: dma:DMR_36600 chemotaxis CheB/CheR fusion protein; SMART: MCP methyltransferase, CheR-type; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region YP_004578809.1 PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: cao:Celal_2243 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_004578810.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; KEGG: cly:Celly_1090 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif YP_004578811.1 KEGG: gfo:GFO_0382 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15 YP_004578812.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: cly:Celly_0653 polyribonucleotide nucleotidyltransferase YP_004578813.1 KEGG: cly:Celly_0658 hyaluronan synthase; PFAM: Glycosyl transferase, family 2 YP_004578814.1 KEGG: dwi:Dwil_GK10515 GK10515 gene product from transcript GK10515-RA YP_004578815.1 KEGG: cat:CA2559_03490 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004578816.1 KEGG: cat:CA2559_03495 hypothetical protein YP_004578817.1 TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: cly:Celly_0655 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_004578818.1 KEGG: cly:Celly_0656 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004578819.1 KEGG: cly:Celly_0657 gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR YP_004578820.1 KEGG: gfo:GFO_0379 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3 YP_004578821.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: fps:FP2049 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase YP_004578822.1 PFAM: Protein of unknown function DUF980; KEGG: cat:CA2559_12488 hypothetical protein YP_004578823.1 KEGG: cat:CA2559_06495 YqeY family protein YP_004578824.1 KEGG: fbc:FB2170_16901 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain YP_004578825.1 KEGG: zpr:ZPR_3805 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain YP_004578826.1 KEGG: cly:Celly_2024 cell division protein YP_004578827.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: fbc:FB2170_16916 UDP-N-acetylmuramate--L-alanine ligase YP_004578828.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: fbc:FB2170_16921 N-acetylglucosaminyl transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28 YP_004578829.1 PFAM: Cell cycle protein; KEGG: fbc:FB2170_16926 transmembrane rod-shape determining protein YP_004578830.1 PFAM: Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: zpr:ZPR_3810 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004578831.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: cat:CA2559_06535 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004578832.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: cat:CA2559_06540 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004578833.1 PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; KEGG: cat:CA2559_06545 penicillin-binding protein; SMART: PASTA YP_004578834.1 KEGG: cat:CA2559_06550 S-adenosyl-methyltransferase MraW YP_004578835.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: fjo:Fjoh_1803 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW YP_004578836.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: gfo:GFO_2776 MraZ protein; PFAM: MraZ domain YP_004578837.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cao:Celal_2206 alpha/beta hydrolase fold protein YP_004578838.1 TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: gfo:GFO_2778 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related YP_004578839.1 KEGG: fbc:FB2170_04365 hypothetical protein; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F YP_004578840.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cat:CA2559_04845 oligopeptide ABC transporter permease YP_004578841.1 SMART: Peptidase S41; PDZ/DHR/GLGF; TIGRFAM: Peptidase S41A, C-terminal protease; KEGG: cat:CA2559_04840 probable periplasmic tail-specific proteinase; PFAM: Peptidase S41; PDZ/DHR/GLGF YP_004578842.1 PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: fps:FP2332 stationary phase survival protein SurE YP_004578843.1 KEGG: zpr:ZPR_0654 hypothetical protein YP_004578844.1 TIGRFAM: Glycosyl transferase, family 19; KEGG: cat:CA2559_04825 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19 YP_004578845.1 PFAM: NLP/P60; KEGG: gfo:GFO_2967 NlpC/P60 family protein YP_004578846.1 KEGG: cao:Celal_0916 ComEC/rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004578847.1 KEGG: coc:Coch_0182 conserved hypothetical protein, secreted YP_004578848.1 KEGG: cat:CA2559_04805 proton/peptide symporter family protein; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter YP_004578849.1 KEGG: cat:CA2559_04805 proton/peptide symporter family protein; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter YP_004578850.1 KEGG: cat:CA2559_04800 dipeptidyl aminopeptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain YP_004578851.1 KEGG: fps:FP2341 hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: Hydroxymethylglutaryl-CoA reductase, class II/archaeal class I YP_004578852.1 KEGG: cly:Celly_0795 hypothetical protein YP_004578853.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: cat:CA2559_04195 peptidyl-prolyl cis-trans isomerase, PpiC-type YP_004578854.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: gfo:GFO_2976 hypothetical protein YP_004578855.1 KEGG: fps:FP2431 hypothetical protein YP_004578856.1 PFAM: Protein of unknown function DUF1239; KEGG: cat:CA2559_04210 hypothetical protein YP_004578857.1 KEGG: cat:CA2559_04215 TPR domain protein YP_004578858.1 KEGG: gfo:GFO_2980 hypothetical protein YP_004578859.1 PFAM: Bordetella pertussis Bvg accessory factor; TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: fbc:FB2170_08414 regulatory protein YP_004578860.1 KEGG: cat:CA2559_06365 hypothetical protein YP_004578862.1 PFAM: Transposase IS3/IS911; KEGG: gfo:GFO_1387 transposase YP_004578863.1 KEGG: gfo:GFO_1388 integrase; manually curated; PFAM: Integrase, catalytic core YP_004578864.1 PFAM: Beta-lactamase-related; KEGG: fbc:FB2170_00335 penicillin-binding protein YP_004578865.1 KEGG: esi:Exig_1326 hypothetical protein YP_004578867.1 KEGG: cat:CA2559_02015 hypothetical protein YP_004578868.1 PFAM: Amidohydrolase 1; KEGG: mtt:Ftrac_0450 amidohydrolase YP_004578869.1 KEGG: gfo:GFO_0317 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1 YP_004578870.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: hor:Hore_04790 OsmC family protein YP_004578871.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: gfo:GFO_0316 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004578872.1 KEGG: cly:Celly_2673 hypothetical protein YP_004578873.1 KEGG: cly:Celly_2672 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase YP_004578874.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: gfo:GFO_2096 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_004578875.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: zpr:ZPR_1692 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004578876.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: gfo:GFO_2098 3-isopropylmalate dehydrogenase YP_004578877.1 KEGG: fjo:Fjoh_2806 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase YP_004578878.1 PFAM: Nitrogen regulatory protein PII; KEGG: zpr:ZPR_3133 P-II family protein YP_004578879.1 KEGG: cly:Celly_0344 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter YP_004578880.1 KEGG: fbc:FB2170_01197 hypothetical protein YP_004578881.1 KEGG: cao:Celal_0768 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal YP_004578882.1 TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: cly:Celly_2034 glutamate synthase, NADH/NADPH small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004578883.1 PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: gfo:GFO_2099 argininosuccinate lyase YP_004578884.1 KEGG: cly:Celly_0828 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_004578885.1 TIGRFAM: Acetylglutamate kinase; KEGG: cao:Celal_0962 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004578886.1 KEGG: cao:Celal_0961 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region YP_004578887.1 KEGG: cly:Celly_0825 acetylornithine transaminase; PFAM: Aminotransferase class-III YP_004578888.1 TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: cly:Celly_0824 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_004578889.1 PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: gfo:GFO_2106 N-acetyl-gamma-glutamyl-phosphate reductase YP_004578890.1 KEGG: gfo:GFO_2107 argininosuccinate synthase; PFAM: Argininosuccinate synthase YP_004578891.1 KEGG: zpr:ZPR_2798 acetyltransferase (GNAT) family protein YP_004578892.1 KEGG: mtt:Ftrac_1635 threonine dehydratase; TIGRFAM: Threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal YP_004578893.1 PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: rbi:RB2501_14429 ketol-acid reductoisomerase YP_004578894.1 KEGG: cly:Celly_2748 acetolactate synthase small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT YP_004578895.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: gfo:GFO_2112 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004578896.1 PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: fbc:FB2170_12301 dihydroxy-acid dehydratase YP_004578897.1 PFAM: Protein of unknown function DUF490; KEGG: cat:CA2559_03800 hypothetical protein YP_004578898.1 PFAM: Bacterial surface antigen (D15); KEGG: cat:CA2559_03805 hypothetical protein YP_004578899.1 KEGG: cao:Celal_3534 hypothetical protein YP_004578900.1 KEGG: cly:Celly_0729 hypothetical protein YP_004578901.1 KEGG: zpr:ZPR_4188 carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_004578902.1 PFAM: Radical SAM; KEGG: cat:CA2559_05035 hypothetical protein YP_004578903.1 PFAM: Protein of unknown function DUF2064; KEGG: cat:CA2559_04160 hypothetical protein YP_004578904.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cat:CA2559_04165 outer membrane protein YP_004578905.1 KEGG: cat:CA2559_04170 hypothetical protein YP_004578906.1 KEGG: cat:CA2559_04175 hypothetical protein YP_004578907.1 KEGG: cat:CA2559_04180 hypothetical protein YP_004578908.1 KEGG: gfo:GFO_3608 rhodanese-like domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004578909.1 PFAM: Protein of unknown function DUF2064; KEGG: cat:CA2559_05025 hypothetical protein YP_004578910.1 TIGRFAM: Inosine guanosine/xanthosine phosphorylase; KEGG: cat:CA2559_05020 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase YP_004578911.1 PFAM: Fatty acid hydroxylase; KEGG: cat:CA2559_05005 probable transmembrane protein YP_004578912.1 PFAM: Protein of unknown function DUF547; KEGG: gfo:GFO_3612 secreted protein containing DUF547 YP_004578913.1 PFAM: Glycosyl transferase, family 2; KEGG: cat:CA2559_04995 glycosyl transferase YP_004578914.1 PFAM: Metallophosphoesterase; KEGG: fjo:Fjoh_0747 metallophosphoesterase YP_004578915.1 PFAM: Surface antigen variable number; KEGG: cly:Celly_0810 outer membrane surface antigen protein YP_004578916.1 KEGG: cly:Celly_0812 hypothetical protein YP_004578917.1 KEGG: cly:Celly_0813 hypothetical protein YP_004578918.1 PFAM: Protein of unknown function DUF547; KEGG: cly:Celly_0814 hypothetical protein YP_004578919.1 KEGG: cly:Celly_0815 rubredoxin--NAD(+) reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004578920.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: gfo:GFO_3617 iron-sulfur binding transmembrane protein YP_004578921.1 KEGG: cly:Celly_0817 MORN variant repeat-containing protein YP_004578922.1 PFAM: Glycosyl transferase, family 2; KEGG: cao:Celal_0951 glycosyl transferase family 2 YP_004578923.1 KEGG: cao:Celal_0952 glucomannan 4-beta-mannosyltransferase; PFAM: Glycosyl transferase, family 2 YP_004578924.1 KEGG: gfo:GFO_3620 hypothetical protein YP_004578925.1 KEGG: fbc:FB2170_06915 hypothetical protein YP_004578926.1 KEGG: zpr:ZPR_2088 hypothetical protein YP_004578927.1 KEGG: cao:Celal_0558 hypothetical protein YP_004578928.1 PFAM: Protein of unknown function DUF155; KEGG: cly:Celly_2066 hypothetical protein YP_004578929.1 KEGG: rbi:RB2501_05250 hypothetical protein YP_004578930.1 PFAM: Deoxyhypusine synthase; KEGG: cly:Celly_2064 deoxyhypusine synthase YP_004578931.1 TIGRFAM: agmatinase; KEGG: cly:Celly_2063 agmatinase; PFAM: Ureohydrolase YP_004578932.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cly:Celly_2062 Orn/DAP/Arg decarboxylase 2, C-terminal protein YP_004578933.1 PFAM: ASCH domain; KEGG: cao:Celal_1420 asch domain protein YP_004578934.1 KEGG: rbi:RB2501_08660 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; SMART: RNA-binding S4 YP_004578935.1 KEGG: cao:Celal_0969 nitrilase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004578936.1 PFAM: UbiA prenyltransferase; KEGG: cly:Celly_0837 UbiA prenyltransferase YP_004578937.1 PFAM: GHMP kinase; KEGG: fps:FP0313 mevalonate kinase YP_004578938.1 PFAM: GHMP kinase; KEGG: gfo:GFO_3632 diphosphomevalonate decarboxylase YP_004578939.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mtt:Ftrac_1694 transcriptional regulator, TetR family YP_004578940.1 KEGG: fjo:Fjoh_1396 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein YP_004578941.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: fjo:Fjoh_1397 glycerophosphoryl diester phosphodiesterase YP_004578942.1 PFAM: Metallophosphoesterase; KEGG: cat:CA2559_13193 hypothetical protein YP_004578943.1 KEGG: cat:CA2559_13198 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region YP_004578944.1 KEGG: cly:Celly_1628 hypothetical protein YP_004578945.1 KEGG: cat:CA2559_05105 alpha-amylase, PFAM: Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004578946.1 KEGG: fjo:Fjoh_1398 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004578947.1 KEGG: cps:CPS_0983 glycosyl hydrolase; PFAM: Glycoside hydrolase, family 31; esterase YP_004578948.1 KEGG: cly:Celly_2424 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004578949.1 KEGG: cly:Celly_2425 kojibiose phosphorylase; PFAM: Glycoside hydrolase family 65, central catalytic; Glycoside hydrolase family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal YP_004578950.1 TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: cly:Celly_2426 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase YP_004578951.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cly:Celly_2427 major facilitator superfamily protein YP_004578952.1 KEGG: gfo:GFO_2137 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004578953.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cly:Celly_2429 TonB-dependent receptor plug YP_004578954.1 PFAM: RagB/SusD; KEGG: cly:Celly_2430 RagB/SusD domain-containing protein YP_004578955.1 KEGG: cly:Celly_2431 hypothetical protein YP_004578956.1 KEGG: fjo:Fjoh_1408 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004578957.1 KEGG: cat:CA2559_01380 hypothetical protein YP_004578958.1 PFAM: Polysaccharide deacetylase; KEGG: fps:FP0293 polysaccharide deacetylase YP_004578959.1 PFAM: Thioredoxin domain; KEGG: cat:CA2559_01370 thioredoxin C-2 YP_004578960.1 PFAM: Metallophosphoesterase; KEGG: gfo:GFO_0142 metallophosphoesterase domain-containing protein YP_004578961.1 KEGG: cat:CA2559_08711 alpha-1,2-mannosidase precursor; TIGRFAM: Alpha-1,2-mannosidase, PFAM: Glycosyl hydrolase 92; Coagulation factor 5/8 type, C-terminal YP_004578962.1 KEGG: fps:FP1608 sugar-transporting permease YP_004578963.1 KEGG: cly:Celly_1845 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; PFAM: Peptidase T2, asparaginase 2 YP_004578964.1 SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; TIGRFAM: DNA polymerase 1; KEGG: cly:Celly_1844 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease YP_004578965.1 PFAM: NUDIX hydrolase domain; KEGG: gme:Gmet_1790 NUDIX hydrolase YP_004578966.1 KEGG: ant:Arnit_2743 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004578968.1 KEGG: cly:Celly_2464 hypothetical protein YP_004578969.1 KEGG: sli:Slin_1403 radical SAM protein; PFAM: Radical SAM N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_004578970.1 KEGG: zpr:ZPR_0516 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13 YP_004578971.1 PFAM: Ribosomal protein S9; KEGG: cly:Celly_1840 30S ribosomal protein S9 YP_004578972.1 KEGG: cly:Celly_1839 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2 YP_004578973.1 TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: cao:Celal_2044 translation elongation factor ts (ef-ts); PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal YP_004578974.1 TIGRFAM: Uridylate kinase, bacteria; KEGG: cat:CA2559_04055 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004578975.1 TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: fbc:FB2170_03200 ribosome releasing factor; PFAM: Ribosome recycling factor YP_004578976.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cpi:Cpin_2205 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004578977.1 KEGG: cat:CA2559_04045 hypothetical protein YP_004578978.1 KEGG: zpr:ZPR_4535 hypothetical protein YP_004578979.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; HAMAP: Asparaginyl-tRNA synthetase; KEGG: cao:Celal_2039 asparaginyl-tRNA synthetase YP_004578980.1 KEGG: cat:CA2559_02740 RNA polymerase; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding YP_004578981.1 KEGG: fbc:FB2170_03225 transmembrane protein YP_004578982.1 KEGG: cat:CA2559_02750 hypothetical protein YP_004578983.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cat:CA2559_02755 hypothetical protein YP_004578984.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cat:CA2559_02760 hypothetical protein YP_004578985.1 KEGG: gfo:GFO_0089 membrane protein YP_004578986.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cat:CA2559_02770 MotA/TolQ/ExbB proton channel family protein YP_004578987.1 TIGRFAM: L-asparaginase, type I; KEGG: cat:CA2559_02780 L-asparaginase I; PFAM: Asparaginase/glutaminase YP_004578988.1 KEGG: cly:Celly_1824 hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related YP_004578989.1 KEGG: fjo:Fjoh_1276 hypothetical protein YP_004578990.1 TIGRFAM: RNA polymerase sigma-70; KEGG: fjo:Fjoh_1275 ECF subfamily RNA polymerase sigma-24 factor YP_004578992.1 KEGG: fjo:Fjoh_1273 hypothetical protein YP_004578994.1 KEGG: fjo:Fjoh_1272 hypothetical protein YP_004578995.1 KEGG: fjo:Fjoh_1271 hypothetical protein YP_004578996.1 KEGG: cat:CA2559_02790 hypothetical protein YP_004578997.1 KEGG: cat:CA2559_01470 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004578999.1 TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: cat:CA2559_02005 2-oxoglutarate dehydrogenase complex, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004579000.1 KEGG: zpr:ZPR_4287 peptidase family M23 YP_004579001.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: cly:Celly_1820 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component YP_004579002.1 KEGG: fjo:Fjoh_1258 hypothetical protein YP_004579003.1 PFAM: Polyprenyl synthetase; KEGG: cao:Celal_1770 geranyltranstransferase YP_004579004.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cao:Celal_1769 transcriptional regulator, TetR family YP_004579005.1 PFAM: Outer membrane efflux protein; KEGG: fbc:FB2170_04770 outer membrane efflux protein YP_004579006.1 KEGG: cao:Celal_1767 efflux transporter, rnd family, mfp subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004579007.1 PFAM: Acriflavin resistance protein; KEGG: cao:Celal_1766 acriflavin resistance protein YP_004579008.1 PFAM: RagB/SusD; KEGG: cat:CA2559_01950 hypothetical protein YP_004579009.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cat:CA2559_01945 outer membrane protein YP_004579010.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: cly:Celly_1644 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain YP_004579011.1 KEGG: mtt:Ftrac_1335 hypothetical protein YP_004579012.1 KEGG: cao:Celal_0072 hypothetical protein YP_004579013.1 PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: rbi:RB2501_05610 transport related, membrane protein YP_004579014.1 KEGG: fbc:FB2170_04795 hypothetical protein YP_004579015.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: fbc:FB2170_04805 cytosine/adenosine deaminase YP_004579016.1 PFAM: Peptidase M36, fungalysin; Protease-associated PA; KEGG: cat:CA2559_04140 metalloprotease YP_004579017.1 PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: fbc:FB2170_04810 1-deoxy-D-xylulose-5-phosphate synthase YP_004579018.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: fbc:FB2170_04850 dGTP triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain YP_004579019.1 KEGG: mtt:Ftrac_2804 hypothetical protein YP_004579020.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mtt:Ftrac_2803 TonB-dependent receptor YP_004579021.1 KEGG: fps:FP0355 hypothetical protein YP_004579022.1 PFAM: Phosphate transporter; KEGG: fbc:FB2170_04910 phosphate sodium symporter YP_004579023.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: cly:Celly_1294 OmpA/MotB domain-containing protein YP_004579024.1 KEGG: cao:Celal_3650 hypothetical protein YP_004579025.1 TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; KEGG: cat:CA2559_02080 probable ribonucleoside-diphosphate reductase large chain; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone YP_004579026.1 KEGG: fbc:FB2170_05005 ribonucleoside-diphosphate reductase small chain; PFAM: Ribonucleotide reductase YP_004579027.1 KEGG: cao:Celal_1734 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region YP_004579028.1 PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; ATP-binding region, ATPase-like; KEGG: cao:Celal_1733 signal transduction histidine kinase, LytS YP_004579029.1 KEGG: zpr:ZPR_0415 hypothetical protein YP_004579030.1 KEGG: cat:CA2559_02065 transmembrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_004579031.1 KEGG: fjo:Fjoh_0525 hypothetical protein YP_004579032.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: gfo:GFO_3481 hypothetical protein YP_004579033.1 TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: cly:Celly_1596 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF YP_004579034.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cly:Celly_1597 CMP/dCMP deaminase zinc-binding protein YP_004579035.1 KEGG: fjo:Fjoh_0531 hypothetical protein YP_004579036.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: cat:CA2559_04015 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase YP_004579037.1 TIGRFAM: Ribosomal protein L25; HAMAP: Ribosomal protein L25; KEGG: zpr:ZPR_0449 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, N-terminal YP_004579038.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: gfo:GFO_3503 peptidyl-tRNA hydrolase YP_004579039.1 PFAM: Proprotein convertase, P; KEGG: cao:Celal_1900 proprotein convertase P YP_004579040.1 PFAM: Cleaved adhesin; KEGG: fps:FP0232 metalloprotease Fpp2 precursor YP_004579041.1 TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: cao:Celal_1899 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase YP_004579042.1 KEGG: cat:CA2559_04035 gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM YP_004579043.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: cly:Celly_1767 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal YP_004579045.1 KEGG: cat:CA2559_03770 hypothetical protein YP_004579046.1 KEGG: cao:Celal_1895 hypothetical protein YP_004579047.1 SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: zpr:ZPR_0457 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase YP_004579048.1 TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; KEGG: fbc:FB2170_04220 magnesium transporter; SMART: Cystathionine beta-synthase, core YP_004579049.1 PFAM: Cupin 2, conserved barrel; KEGG: fbc:FB2170_04225 hypothetical protein YP_004579050.1 KEGG: cly:Celly_1757 phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region YP_004579051.1 PFAM: Protein of unknown function DUF1801; KEGG: cat:CA2559_09788 hypothetical protein YP_004579052.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fbc:FB2170_04240 glyoxalase YP_004579053.1 KEGG: ddi:DDB_G0276817 hypothetical protein YP_004579054.1 KEGG: fbc:FB2170_04250 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004579055.1 KEGG: cly:Celly_1753 hypothetical protein YP_004579056.1 KEGG: fps:FP0063 hemolysin; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004579057.1 TIGRFAM: Aspartate kinase region; KEGG: cao:Celal_1886 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004579058.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cly:Celly_1750 GCN5-like N-acetyltransferase YP_004579059.1 HAMAP: Fructose-1,6-bisphosphatase; KEGG: cly:Celly_1749 fructose-1,6-bisphosphatase class 1; PFAM: Fructose-1,6-bisphosphatase YP_004579060.1 KEGG: cat:CA2559_02295 fructose-1,6-bisphosphatase YP_004579061.1 KEGG: cat:CA2559_02290 hypothetical protein YP_004579062.1 TIGRFAM: Small GTP-binding protein; PFAM: Ras; KEGG: fbc:FB2170_04570 hypothetical protein; SMART: Ras small GTPase, Rab type; Ras small GTPase, Ras type; Ras small GTPase, Rho type YP_004579063.1 KEGG: fbc:FB2170_04565 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region YP_004579064.1 KEGG: fbc:FB2170_04565 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region YP_004579065.1 KEGG: fjo:Fjoh_0532 hypothetical protein YP_004579066.1 TIGRFAM: Transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: gfo:GFO_3159 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004579067.1 PFAM: Redoxin; KEGG: cao:Celal_1875 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen YP_004579068.1 KEGG: fps:FP0059 hypothetical protein; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102 YP_004579069.1 PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: fjo:Fjoh_1218 peptidase U61, LD-carboxypeptidase A YP_004579070.1 PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: cao:Celal_1869 methionyl-tRNA synthetase YP_004579071.1 KEGG: fbc:FB2170_10166 tRNA modification GTPase YP_004579072.1 PFAM: TonB-dependent receptor, plug; KEGG: fbc:FB2170_00085 hypothetical protein YP_004579073.1 KEGG: cly:Celly_1729 hypothetical protein YP_004579074.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; KEGG: cly:Celly_1728 OmpA/MotB domain-containing protein YP_004579075.1 TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: cly:Celly_1727 Tex-like protein; SMART: Resolvase, RNase H-like fold YP_004579076.1 KEGG: cao:Celal_2226 hypothetical protein YP_004579079.1 KEGG: cat:CA2559_02640 hypothetical protein YP_004579080.1 PFAM: TonB-dependent receptor, beta-barrel; KEGG: cat:CA2559_02635 hypothetical protein YP_004579081.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cat:CA2559_02630 hypothetical protein YP_004579082.1 KEGG: cat:CA2559_02620 hypothetical protein YP_004579083.1 KEGG: zpr:ZPR_0196 hypothetical protein YP_004579084.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cly:Celly_1082 TonB-dependent receptor plug YP_004579085.1 HAMAP: Phosphoglucose isomerase (PGI); KEGG: fbc:FB2170_07155 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI) YP_004579086.1 PFAM: Peptidase M23; KEGG: cao:Celal_1190 peptidase M23 YP_004579087.1 PFAM: Tryptophan 2,3-dioxygenase; KEGG: fps:FP0228 tryptophan 2,3-dioxygenase YP_004579088.1 KEGG: cat:CA2559_02605 hypothetical protein YP_004579089.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: fps:FP0226 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004579090.1 PFAM: Homogentisate 1,2-dioxygenase; KEGG: gfo:GFO_3171 homogentisate 1,2-dioxygenase YP_004579091.1 PFAM: Patatin; KEGG: cat:CA2559_01780 patatin-like phospholipase YP_004579092.1 SMART: Excinuclease ABC, C subunit, N-terminal; TIGRFAM: Excinuclease ABC, C subunit; KEGG: zpr:ZPR_0184 UvrABC system protein C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal YP_004579093.1 PFAM: Protein of unknown function DUF785; KEGG: cat:CA2559_02455 hypothetical protein YP_004579094.1 KEGG: cat:CA2559_02460 ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type YP_004579095.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: cat:CA2559_02465 hypothetical protein YP_004579096.1 KEGG: cly:Celly_1074 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004579097.1 KEGG: gfo:GFO_3179 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579098.1 HAMAP: Peptidase A8, signal peptidase II; KEGG: gfo:GFO_3180 lipoprotein signal peptidase YP_004579099.1 KEGG: zpr:ZPR_0177 hypothetical protein YP_004579100.1 KEGG: cao:Celal_1199 regulatory protein YP_004579101.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: cao:Celal_1200 isoleucyl-tRNA synthetase YP_004579102.1 KEGG: cao:Celal_1166 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core YP_004579103.1 KEGG: cat:CA2559_01445 esterase YP_004579104.1 KEGG: zpr:ZPR_4521 transhypothetical protein YP_004579105.1 PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: cao:Celal_1161 aspartate 1-decarboxylase YP_004579106.1 TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: gfo:GFO_3544 pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004579107.1 KEGG: gfo:GFO_3545 glycogen synthase-like protein; PFAM: Starch synthase catalytic region YP_004579108.1 KEGG: cat:CA2559_01420 hypothetical protein YP_004579109.1 PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: gfo:GFO_3547 glucosamine--fructose-6-phosphate aminotransferase YP_004579110.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cao:Celal_1156 TonB-dependent receptor YP_004579111.1 KEGG: cao:Celal_1155 lipolytic protein g-D-S-l family YP_004579112.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: cao:Celal_1154 ATP synthase f1 subcomplex beta subunit; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004579113.1 PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; KEGG: cly:Celly_1044 ATPase, F1 complex, delta/epsilon subunit YP_004579114.1 KEGG: gfo:GFO_2917 secreted protein YP_004579115.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: cly:Celly_1043 peptidase S24/S26A/S26B YP_004579116.1 KEGG: cao:Celal_1108 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II YP_004579117.1 KEGG: fjo:Fjoh_0813 hypothetical protein YP_004579118.1 TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: cly:Celly_1037 dethiobiotin synthetase YP_004579119.1 KEGG: cly:Celly_1036 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III YP_004579120.1 KEGG: fjo:Fjoh_2329 hypothetical protein YP_004579121.1 KEGG: cly:Celly_1035 beta-ketoacyl-acyl-carrier-protein synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal YP_004579122.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: tsa:AciPR4_3666 proline-specific peptidase YP_004579123.1 KEGG: cly:Celly_1032 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB YP_004579124.1 SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; KEGG: cly:Celly_1031 transcription factor jumonji JmjC domain-containing protein YP_004579125.1 KEGG: cao:Celal_1098 hypothetical protein YP_004579126.1 KEGG: fbc:FB2170_07449 transcriptional regulatory protein; manually curated; PFAM: Regulatory protein RecX YP_004579127.1 KEGG: fjo:Fjoh_0803 hypothetical protein YP_004579128.1 PFAM: Cell surface receptor IPT/TIG; KEGG: fps:FP2244 hypothetical protein YP_004579129.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cat:CA2559_02495 hypothetical protein YP_004579130.1 KEGG: gfo:GFO_3185 DNA repair protein RecO; TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO YP_004579131.1 KEGG: fjo:Fjoh_0707 periplasmic ligand-binding sensor protein YP_004579132.1 PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: sli:Slin_5461 membrane bound O-acyl transferase MBOAT family protein YP_004579133.1 KEGG: sli:Slin_5462 hypothetical protein YP_004579134.1 KEGG: gfo:GFO_3186 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region YP_004579135.1 KEGG: fps:FP0272 hypothetical protein YP_004579136.1 KEGG: fbc:FB2170_07025 Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004579137.1 KEGG: rbi:RB2501_07770 hypothetical protein YP_004579138.1 KEGG: fps:FP0353 hypothetical protein YP_004579139.1 PFAM: Arsenate reductase-like; KEGG: gfo:GFO_3441 ArsC family protein YP_004579140.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: fps:FP0351 drug/metabolite-transporting permease YP_004579141.1 KEGG: zpr:ZPR_0337 hypothetical protein YP_004579142.1 KEGG: gfo:GFO_3433 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732 YP_004579143.1 KEGG: cly:Celly_1659 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region YP_004579144.1 PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: fjo:Fjoh_0744 nicotinic acid mononucleotide adenylyltransferase YP_004579145.1 SMART: MCP methyltransferase, CheR-type; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; TIGRFAM: PAS; KEGG: cyt:cce_2232 two-component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; Signal transduction response regulator, receiver region YP_004579146.1 KEGG: cat:CA2559_02210 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; Transport-associated; SMART: Peptidoglycan-binding Lysin subgroup YP_004579147.1 KEGG: cao:Celal_1219 hypothetical protein YP_004579148.1 KEGG: fbc:FB2170_06890 phospholipids biosynthesis; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal YP_004579149.1 KEGG: cat:CA2559_02235 phenylalanyl-tRNA synthetase alpha subunit YP_004579150.1 KEGG: fps:FP1497 hypothetical protein YP_004579151.1 PFAM: Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; KEGG: cao:Celal_1918 flavodoxin/nitric oxide synthase YP_004579152.1 KEGG: cao:Celal_1917 hypothetical protein YP_004579153.1 PFAM: Ankyrin repeat; KEGG: cao:Celal_1916 ankyrin YP_004579154.1 KEGG: rbi:RB2501_09440 hypothetical protein YP_004579155.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cly:Celly_1196 TonB-dependent receptor plug YP_004579156.1 KEGG: cly:Celly_1195 hypothetical protein YP_004579157.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cly:Celly_2346 TetR family transcriptional regulator YP_004579158.1 KEGG: cly:Celly_2347 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_004579159.1 KEGG: cly:Celly_2348 hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein YP_004579160.1 KEGG: cao:Celal_1257 efflux transporter, rnd family, mfp subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004579161.1 KEGG: cao:Celal_1256 hypothetical protein YP_004579162.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: fbc:FB2170_06665 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal YP_004579163.1 KEGG: zpr:ZPR_0326 hypothetical protein YP_004579164.1 PFAM: Colicin V production protein; KEGG: fbc:FB2170_06855 hypothetical protein YP_004579165.1 PFAM: Carbonic anhydrase; KEGG: fbc:FB2170_06675 carbonic anhydrase chloroplast YP_004579166.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: cao:Celal_1253 sulphate transporter YP_004579167.1 PFAM: Protein of unknown function DUF2490; KEGG: ran:Riean_0664 hypothetical protein YP_004579168.1 KEGG: cly:Celly_1205 hypothetical protein YP_004579169.1 PFAM: Sulphate transporter; KEGG: cly:Celly_1206 sulfate transporter YP_004579170.1 KEGG: cly:Celly_1207 hypothetical protein YP_004579171.1 KEGG: fbc:FB2170_06685 TRP domain-containing protein BatE; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SH3, type 3; SMART: Bacterial SH3-like region; Tetratricopeptide repeat YP_004579172.1 KEGG: fbc:FB2170_06690 aerotolerance-related exported protein YP_004579173.1 PFAM: Tetratricopeptide TPR-1; KEGG: cly:Celly_1144 hypothetical protein YP_004579174.1 KEGG: cat:CA2559_02145 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004579175.1 PFAM: NADPH-dependent FMN reductase; KEGG: fjo:Fjoh_1183 NADPH-dependent FMN reductase YP_004579176.1 KEGG: cat:CA2559_02150 aerotolerance-related membrane protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004579177.1 KEGG: cao:Celal_1242 hypothetical protein YP_004579178.1 PFAM: Protein of unknown function DUF58; KEGG: cly:Celly_1140 hypothetical protein YP_004579179.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: cat:CA2559_02165 magnesium chelatase YP_004579180.1 PFAM: Aldo/keto reductase; KEGG: fbc:FB2170_06725 hypothetical protein YP_004579181.1 KEGG: cly:Celly_1136 serine 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004579182.1 PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: gfo:GFO_3407 hypothetical protein YP_004579183.1 KEGG: fjo:Fjoh_2789 hypothetical protein YP_004579184.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: fbc:FB2170_06800 OmpA domain-containing protein YP_004579185.1 KEGG: fbc:FB2170_06810 piperideine-6-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004579186.1 KEGG: zpr:ZPR_0296 L-asparaginase; PFAM: Peptidase T2, asparaginase 2 YP_004579187.1 PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; KEGG: cao:Celal_1226 alpha-2-macroglobulin domain protein YP_004579188.1 KEGG: cat:CA2559_02125 hypothetical protein YP_004579189.1 KEGG: cao:Celal_1222 hypothetical protein YP_004579190.1 TIGRFAM: Penicillin-binding protein 1C; KEGG: cly:Celly_1119 penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal YP_004579191.1 KEGG: cat:CA2559_01070 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III YP_004579192.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: cat:CA2559_04500 hypothetical protein YP_004579193.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; KEGG: cat:CA2559_04495 OmpA family protein YP_004579194.1 PFAM: FAD dependent oxidoreductase; KEGG: cly:Celly_1261 FAD dependent oxidoreductase YP_004579195.1 KEGG: cly:Celly_1260 hypothetical protein YP_004579196.1 PFAM: ABC transporter-like; KEGG: cly:Celly_1178 Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core YP_004579197.1 KEGG: cat:CA2559_02385 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain YP_004579198.1 TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: cao:Celal_1325 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding YP_004579199.1 KEGG: cly:Celly_1182 large conductance mechanosensitive channel protein; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel YP_004579200.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: cao:Celal_1322 alanine racemase YP_004579201.1 HAMAP: Thymidine kinase, subgroup; KEGG: gfo:GFO_3354 thymidine kinase; PFAM: Thymidine kinase YP_004579202.1 KEGG: gfo:GFO_3355 hypothetical protein YP_004579203.1 KEGG: cat:CA2559_02425 hypothetical protein YP_004579204.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: cly:Celly_1187 hypothetical protein; PFAM: Tetrapyrrole methylase YP_004579205.1 KEGG: cat:CA2559_02575 regulatory protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004579206.1 PFAM: Uracil-DNA glycosylase-like; KEGG: fbc:FB2170_06375 hypothetical protein YP_004579207.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: cat:CA2559_02815 probable fusion protein YP_004579208.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: cly:Celly_1192 OsmC family protein YP_004579209.1 KEGG: fbc:FB2170_06385 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1 YP_004579210.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: cly:Celly_1201 OmpA/MotB domain-containing protein YP_004579211.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cly:Celly_1200 major facilitator superfamily protein YP_004579212.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sco:SCO0461 hydrolase YP_004579213.1 PFAM: Peptidoglycan binding-like YP_004579215.1 PFAM: Metallophosphoesterase; KEGG: cao:Celal_1309 metallophosphoesterase YP_004579216.1 PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: cat:CA2559_02840 6-pyruvoyl tetrahydrobiopterin synthase YP_004579217.1 KEGG: cat:CA2559_02855 hypothetical protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE YP_004579218.1 KEGG: gpb:HDN1F_22320 sensor histidine kinase/response regulator; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004579219.1 KEGG: cat:CA2559_03205 alpha/beta superfamily hydrolase YP_004579220.1 KEGG: gfo:GFO_3373 hypothetical protein YP_004579221.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; KEGG: fbc:FB2170_06520 thrombospondin type 3 repeat:OmpA/MotB YP_004579222.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: cat:CA2559_03185 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/II YP_004579223.1 PFAM: DNA helicase, UvrD/REP type; KEGG: cly:Celly_1245 UvrD/REP helicase YP_004579224.1 PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: cao:Celal_1286 superoxide dismutase YP_004579225.1 KEGG: gfo:GFO_3378 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II YP_004579226.1 PFAM: Carbohydrate/purine kinase; KEGG: fps:FP0197 carbohydrate kinase YP_004579227.1 KEGG: fbc:FB2170_06550 ribonuclease H-like protein YP_004579228.1 KEGG: fbc:FB2170_06555 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal YP_004579229.1 TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: cly:Celly_1252 acyl carrier protein; PFAM: Phosphopantetheine-binding YP_004579230.1 TIGRFAM: 3-oxoacyl-ACP synthase 2; KEGG: cao:Celal_1279 3-oxoacyl-ACP synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004579231.1 SMART: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: fbc:FB2170_06570 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding YP_004579232.1 KEGG: cly:Celly_1255 hypothetical protein YP_004579233.1 TIGRFAM: Pyruvate kinase; KEGG: gfo:GFO_3386 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta YP_004579234.1 HAMAP: DNA polymerase IV; KEGG: cly:Celly_1156 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like YP_004579235.1 PFAM: Adenylate cyclase; KEGG: cat:CA2559_02800 hypothetical protein YP_004579236.1 KEGG: rbi:RB2501_07570 phenylalanyl-tRNA synthetase subunit alpha YP_004579237.1 KEGG: fba:FIC_00860 hypothetical protein YP_004579238.1 TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: cat:CA2559_02355 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal YP_004579239.1 KEGG: zpr:ZPR_4621 biotin carboxyl carrier protein of acetyl-CoA carboxylase; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment YP_004579240.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: cly:Celly_1268 3-oxoacyl-ACP synthase 3 YP_004579241.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: zpr:ZPR_4623 50S ribosomal protein L32; PFAM: Ribosomal protein L32p YP_004579242.1 PFAM: Protein of unknown function DUF177; KEGG: zpr:ZPR_4624 hypothetical protein YP_004579243.1 PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: cat:CA2559_02330 4-hydroxythreonine-4-phosphate dehydrogenase YP_004579244.1 TIGRFAM: Lumazine-binding protein; KEGG: fjo:Fjoh_0650 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004579246.1 KEGG: fps:FP0237 lyase; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004579247.1 TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: cly:Celly_1291 ribosome-binding factor A; PFAM: Ribosome-binding factor A YP_004579248.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: cat:CA2559_03295 lipoprotein releasing system transmembrane protein YP_004579249.1 KEGG: zpr:ZPR_4693 tRNA-dihydrouridine synthase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase YP_004579251.1 PFAM: Prolipoprotein diacylglyceryl transferase; KEGG: fbc:FB2170_06180 prolipoprotein diacylglyceryl transferase YP_004579252.1 PFAM: Radical SAM; KEGG: fbc:FB2170_06175 radical SAM YP_004579253.1 KEGG: fbc:FB2170_06170 hypothetical protein YP_004579254.1 PFAM: TonB-dependent receptor, beta-barrel; KEGG: fbc:FB2170_04060 hypothetical protein YP_004579255.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: cly:Celly_1295 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_004579256.1 PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: fbc:FB2170_06140 Na(+):H(+) antiporter, CPA1 family protein YP_004579257.1 PFAM: UspA; KEGG: fbc:FB2170_06135 hypothetical protein YP_004579258.1 PFAM: Sulphate transporter; KEGG: fbc:FB2170_06130 sulfate transporter family protein YP_004579259.1 KEGG: fjo:Fjoh_1187 beta-lactamase domain-containing protein YP_004579260.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: cly:Celly_1303 peptidase S8 and S53 subtilisin kexin sedolisin YP_004579261.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: cly:Celly_1304 peptidase M1 membrane alanine aminopeptidase YP_004579262.1 KEGG: gfo:GFO_3302 glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004579263.1 PFAM: Propeptide, peptidase M4/M36; KEGG: bac:BamMC406_5000 peptidase YP_004579264.1 KEGG: cat:CA2559_03375 hypothetical protein YP_004579265.1 KEGG: cly:Celly_1324 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein YP_004579267.1 KEGG: fjo:Fjoh_1863 hypothetical protein YP_004579268.1 TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; KEGG: mtt:Ftrac_0357 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004579269.1 PFAM: Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain; KEGG: mba:Mbar_A3539 hypothetical protein YP_004579270.1 KEGG: fps:FP2493 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase YP_004579272.1 KEGG: cao:Celal_3469 hypothetical protein YP_004579273.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cly:Celly_1315 lysine exporter protein LysE/YggA YP_004579274.1 KEGG: fbc:FB2170_17086 hypothetical protein YP_004579275.1 PFAM: Uncharacterised protein family UPF0145; KEGG: bsa:Bacsa_0595 hypothetical protein YP_004579276.1 TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; KEGG: cat:CA2559_03430 exoribonuclease; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain YP_004579277.1 TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; KEGG: cly:Celly_1312 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase YP_004579278.1 KEGG: fbc:FB2170_05980 cobalt/zinc/cadmium cation efflux pump protein; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004579279.1 KEGG: fbc:FB2170_05985 acetyltransferase YybD YP_004579280.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: fps:FP0021 OmpA family outer membrane protein YP_004579281.1 TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: cat:CA2559_03110 carboxy-terminal processing protease precursor; SMART: Peptidase S41; PDZ/DHR/GLGF YP_004579282.1 TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: cao:Celal_1416 ribonuclease P protein component; PFAM: Ribonuclease P YP_004579283.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: psn:Pedsa_1206 helix-turn-helix domain protein YP_004579284.1 KEGG: cat:CA2559_03365 glutamyl-tRNA synthetase YP_004579285.1 TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: fjo:Fjoh_1004 hypothetical protein; PFAM: Uncharacterised protein family UPF0054 YP_004579286.1 TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: zpr:ZPR_0030 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related YP_004579287.1 PFAM: Methyltransferase type 12; KEGG: fps:FP0004 SAM-dependent methyltransferase YP_004579288.1 PFAM: Outer membrane chaperone Skp (OmpH); KEGG: cly:Celly_1331 outer membrane chaperone Skp YP_004579289.1 KEGG: coc:Coch_0658 adhesin precursor SprB YP_004579290.1 TIGRFAM: Conserved hypothetical protein CHP00147; PFAM: Diacylglycerol kinase, catalytic region; KEGG: pmo:Pmob_0717 diacylglycerol kinase catalytic region; SMART: Diacylglycerol kinase, catalytic region YP_004579291.1 KEGG: cly:Celly_1339 DNA polymerase III subunit delta YP_004579292.1 KEGG: coc:Coch_0658 adhesin precursor SprB YP_004579293.1 HAMAP: Phosphoglycerate kinase; KEGG: cao:Celal_1505 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase YP_004579294.1 KEGG: cat:CA2559_03310 peptidoglycan-binding LysM; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004579295.1 KEGG: zpr:ZPR_0038 hypothetical protein YP_004579296.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: rbi:RB2501_06760 hypothetical protein; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106 YP_004579297.1 PFAM: Peptidase M23; KEGG: cat:CA2559_02890 peptidase YP_004579298.1 PFAM: GH3 auxin-responsive promoter; KEGG: zpr:ZPR_0041 hypothetical protein YP_004579299.1 KEGG: zpr:ZPR_0042 hypothetical protein YP_004579300.1 KEGG: cao:Celal_1585 hypothetical protein YP_004579301.1 KEGG: cly:Celly_1349 hypothetical protein YP_004579302.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: sdl:Sdel_1797 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004579303.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: cly:Celly_1351 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004579304.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: cao:Celal_1582 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related YP_004579305.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: gfo:GFO_3286 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004579306.1 KEGG: cat:CA2559_13083 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_004579307.1 KEGG: brm:Bmur_1990 hypothetical protein YP_004579308.1 KEGG: fps:FP1297 UDP-N-acetylglucosamine C4 epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004579309.1 PFAM: O-antigen ligase-related; KEGG: cat:CA2559_02935 hypothetical protein YP_004579310.1 PFAM: Polysaccharide biosynthesis protein; KEGG: mvn:Mevan_0202 polysaccharide biosynthesis protein YP_004579311.1 KEGG: gct:GC56T3_3302 hypothetical protein YP_004579312.1 KEGG: cat:CA2559_13018 hypothetical protein YP_004579313.1 PFAM: Glycosyl transferase, group 1; KEGG: cao:Celal_3132 glycosyl transferase group 1 YP_004579314.1 KEGG: abu:Abu_0677 glycosyltransferase; manually curated; PFAM: Glycosyl transferase, group 1 YP_004579315.1 KEGG: chu:CHU_1227 hypothetical protein YP_004579316.1 PFAM: Formyl transferase, N-terminal; KEGG: sun:SUN_1525 hypothetical protein YP_004579317.1 KEGG: ran:Riean_0750 hypothetical protein YP_004579318.1 PFAM: Glycosyl transferase, group 1; KEGG: cat:CA2559_13003 capsular polysaccharide biosynthesis glycosyl transferase YP_004579319.1 KEGG: ran:Riean_0747 sugar transferase; PFAM: Bacterial sugar transferase YP_004579320.1 TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: bpb:bpr_I0427 acetyltransferase YP_004579321.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ran:Riean_0739 DegT/DnrJ/eryc1/StrS aminotransferase YP_004579322.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: fjo:Fjoh_0328 polysaccharide biosynthesis protein CapD YP_004579323.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: rbi:RB2501_06660 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_004579324.1 KEGG: fjo:Fjoh_1037 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004579325.1 TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: fbc:FB2170_05740 glycosyltransferase; PFAM: Bacterial sugar transferase YP_004579326.1 KEGG: gfo:GFO_3284 TuaG-like glycosyl transferase; manually curated; PFAM: Glycosyl transferase, family 2 YP_004579327.1 PFAM: AMP-dependent synthetase/ligase; KEGG: fjo:Fjoh_1040 coenzyme F390 synthetase-like protein YP_004579328.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: fbc:FB2170_05730 phosphoribosylamine--glycine ligase YP_004579329.1 KEGG: cly:Celly_1365 hypothetical protein YP_004579330.1 KEGG: cat:CA2559_02985 hypothetical protein YP_004579331.1 KEGG: zpr:ZPR_2084 uracil phosphoribosyltransferase YP_004579332.1 KEGG: cat:CA2559_02995 hypothetical protein YP_004579333.1 PFAM: Glycosyl transferase, family 9; KEGG: fjo:Fjoh_1046 glycosyl transferase YP_004579334.1 PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: fjo:Fjoh_1048 ferredoxin YP_004579335.1 PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: cly:Celly_1377 PadR-like family transcriptional regulator YP_004579336.1 KEGG: cly:Celly_1381 hypothetical protein YP_004579337.1 KEGG: gfo:GFO_3276 hypothetical protein YP_004579338.1 KEGG: cat:CA2559_03015 ATP-binding component of ABC transporter protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004579339.1 KEGG: gfo:GFO_3274 hypothetical protein YP_004579340.1 PFAM: Protein of unknown function DUF583; KEGG: cat:CA2559_03025 hypothetical protein YP_004579341.1 manually curated; KEGG: cao:Celal_1546 hypothetical protein YP_004579342.1 KEGG: cao:Celal_1545 hypothetical protein YP_004579343.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: cao:Celal_1544 ATP synthase f0 subcomplex A subunit; PFAM: ATPase, F0 complex, subunit A YP_004579344.1 TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: cly:Celly_1389 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C YP_004579345.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: cly:Celly_1390 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast YP_004579346.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: cat:CA2559_03055 ATP synthase subunit D; PFAM: ATPase, F1 complex, OSCP/delta subunit YP_004579347.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: cly:Celly_1392 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004579348.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: cao:Celal_1539 ATP synthase f1 subcomplex gamma subunit; PFAM: ATPase, F1 complex, gamma subunit YP_004579349.1 KEGG: cao:Celal_1535 hypothetical protein YP_004579350.1 KEGG: cao:Celal_1535 hypothetical protein YP_004579351.1 PFAM: Polysaccharide biosynthesis protein; KEGG: gfo:GFO_3263 polysaccharide biosynthesis protein YP_004579352.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: cat:CA2559_03550 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004579353.1 PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; KEGG: cly:Celly_1397 nucleotidyl transferase YP_004579354.1 KEGG: mmw:Mmwyl1_3724 antibiotic biosynthesis monooxygenase domain-containing protein YP_004579355.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: gfo:GFO_3259 TPR repeat-containing protein YP_004579356.1 KEGG: cao:Celal_1530 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004579357.1 PFAM: Peptidase M23; KEGG: gfo:GFO_3257 M23 family peptidase YP_004579358.1 PFAM: Thioesterase superfamily; KEGG: gfo:GFO_3254 acyl-CoA thioester hydrolase YP_004579359.1 PFAM: Sporulation/cell division region, bacteria; KEGG: cat:CA2559_03520 hypothetical protein YP_004579360.1 PFAM: DNA recombination-mediator protein A; KEGG: gfo:GFO_3252 smf family protein YP_004579361.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: cat:CA2559_03505 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_004579362.1 KEGG: fps:FP2246 acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004579363.1 KEGG: cat:CA2559_03495 hypothetical protein YP_004579364.1 KEGG: cat:CA2559_03490 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004579365.1 KEGG: fbc:FB2170_05510 hypothetical protein YP_004579366.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: fbc:FB2170_05505 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA YP_004579367.1 HAMAP: UPF0176 protein yceA; PFAM: Rhodanese-like; KEGG: cly:Celly_1416 hypothetical protein; SMART: Rhodanese-like YP_004579368.1 PFAM: PSP1, C-terminal; KEGG: zpr:ZPR_0090 PSP1 domain-containing protein YP_004579369.1 TIGRFAM: Gliding motility-associated lipoprotein, GldH; KEGG: zpr:ZPR_0091 gliding motility lipoprotein GldH-like protein YP_004579370.1 KEGG: cly:Celly_1413 peptidoglycan glycosyltransferase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_004579372.1 PFAM: Protein of unknown function, Porph ging; KEGG: lby:Lbys_2218 hypothetical protein YP_004579373.1 KEGG: cao:Celal_1064 hypothetical protein YP_004579374.1 TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: cat:CA2559_03105 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase YP_004579375.1 TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: cao:Celal_1510 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase YP_004579377.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: cat:CA2559_03560 ABC-type dipeptide transport system, ATPase component; SMART: ATPase, AAA+ type, core YP_004579378.1 KEGG: cat:CA2559_03565 thermolysin; PFAM: MAM; Carbohydrate-binding domain, family 5/12; SMART: MAM YP_004579379.1 KEGG: cat:CA2559_03580 polysaccharide biosynthesis protein YP_004579380.1 PFAM: Beta-lactamase-related; KEGG: coc:Coch_1082 beta-lactamase YP_004579381.1 KEGG: cly:Celly_1308 hypothetical protein YP_004579382.1 KEGG: cao:Celal_1627 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_004579383.1 KEGG: cly:Celly_1565 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Protein of unknown function DUF21; SMART: Cystathionine beta-synthase, core YP_004579384.1 PFAM: Cytochrome c, class I; KEGG: fps:FP0372 cytochrome c family protein YP_004579385.1 KEGG: cly:Celly_1559 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase YP_004579386.1 KEGG: cao:Celal_1632 hypothetical protein YP_004579387.1 KEGG: cly:Celly_1554 coproporphyrinogen oxidase; PFAM: Coproporphyrinogen III oxidase YP_004579388.1 KEGG: cly:Celly_1552 4-oxalocrotonate tautomerase YP_004579389.1 PFAM: Protein of unknown function DUF540; KEGG: cly:Celly_1551 hypothetical protein YP_004579390.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: cly:Celly_1549 uroporphyrinogen decarboxylase YP_004579391.1 KEGG: cly:Celly_1548 porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YP_004579392.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: gfo:GFO_3223 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal YP_004579393.1 KEGG: gfo:GFO_3222 HTH domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004579394.1 manually curated YP_004579395.1 PFAM: GumN; KEGG: cao:Celal_1654 GumN family protein YP_004579396.1 PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: zpr:ZPR_0116 ferrochelatase (protoheme ferro-lyase) YP_004579397.1 KEGG: zpr:ZPR_0117 C-5 cytosine-specific DNA methylase:multi antimicrobial extrusion (MatE) protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE YP_004579398.1 PFAM: Uncharacterised protein family UPF0093; KEGG: zpr:ZPR_0118 hypothetical protein YP_004579400.1 KEGG: cat:CA2559_03680 nitrogen regulation protein NtrY; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004579401.1 KEGG: cat:CA2559_03685 enoyl-CoA hydratase/carnithine racemase; PFAM: Crotonase, core YP_004579402.1 KEGG: fjo:Fjoh_4364 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat YP_004579404.1 PFAM: GumN; KEGG: mtt:Ftrac_1455 GumN family protein YP_004579405.1 KEGG: cly:Celly_1606 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_004579406.1 KEGG: zpr:ZPR_2139 hypothetical protein YP_004579407.1 KEGG: zpr:ZPR_2138 activator protein MtlR; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004579408.1 TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: cly:Celly_1602 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region YP_004579409.1 KEGG: fjo:Fjoh_0968 acyl-ACP desaturase; PFAM: Fatty acid desaturase, type 2 YP_004579410.1 KEGG: cly:Celly_1601 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004579411.1 PFAM: Uncharacterised protein family UPF0403; KEGG: zpr:ZPR_0127 hypothetical protein YP_004579412.1 KEGG: fbc:FB2170_05060 heat shock protein DnaJ; PFAM: Heat shock protein DnaJ, N-terminal; Protein of unknown function DUF1332; SMART: Heat shock protein DnaJ, N-terminal YP_004579413.1 KEGG: str:Sterm_1197 hypothetical protein YP_004579414.1 KEGG: shg:Sph21_3619 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_004579415.1 KEGG: fjo:Fjoh_2293 hypothetical protein YP_004579416.1 PFAM: ABC-3; KEGG: cao:Celal_4017 abc-3 protein YP_004579417.1 PFAM: ABC-3; KEGG: cao:Celal_4016 abc-3 protein YP_004579418.1 PFAM: ABC transporter-like; KEGG: cao:Celal_4015 phosphonate-transporting atpase; SMART: ATPase, AAA+ type, core YP_004579419.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: cly:Celly_1687 ABC-type metal ion transporter, periplasmic subunit YP_004579420.1 KEGG: cat:CA2559_02030 hypothetical protein YP_004579421.1 KEGG: cao:Celal_4013 iron (metal) dependent repressor, dtxr family; PFAM: Iron dependent repressor; SMART: Iron dependent repressor YP_004579422.1 KEGG: cat:CA2559_02055 hypothetical protein YP_004579423.1 manually curated YP_004579424.1 KEGG: cat:CA2559_03990 ferrous iron transport protein B-like protein; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal YP_004579425.1 KEGG: cat:CA2559_03985 probable ferrous iron transport protein A; manually curated; PFAM: Ferrous iron transporter, FeoA subunit YP_004579426.1 PFAM: Copper chaperone SCO1/SenC; KEGG: fbc:FB2170_04625 hypothetical protein YP_004579427.1 PFAM: Peptidase M50; KEGG: rbi:RB2501_05505 protease YP_004579428.1 KEGG: fjo:Fjoh_1200 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004579429.1 KEGG: cat:CA2559_04735 hypothetical protein YP_004579430.1 KEGG: cly:Celly_1572 hypothetical protein YP_004579431.1 KEGG: fps:FP0087 glycosyl hydrolase YP_004579432.1 KEGG: zpr:ZPR_4568 neutral endopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal YP_004579433.1 KEGG: cao:Celal_0317 thrombospondin type 3 repeat-containing protein; TIGRFAM: Protein of unknown function DUF11; PFAM: Protein of unknown function DUF11 YP_004579434.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: cat:CA2559_13648 hypothetical protein YP_004579435.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; KEGG: cat:CA2559_13643 OmpA family protein YP_004579436.1 KEGG: fbc:FB2170_09526 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004579437.1 KEGG: cat:CA2559_01925 aspartyl-tRNA synthetase YP_004579438.1 KEGG: cat:CA2559_08911 hypothetical protein YP_004579439.1 KEGG: cat:CA2559_01930 hypothetical protein YP_004579440.1 KEGG: fjo:Fjoh_5041 GCN5-related N-acetyltransferase YP_004579441.1 KEGG: gfo:GFO_3102 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004579442.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cat:CA2559_04510 hypothetical protein YP_004579443.1 KEGG: zpr:ZPR_0205 HflX-like GTP-binding protein; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related YP_004579444.1 KEGG: gfo:GFO_1537 bifunctional transglycosylase/transpeptidase penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_004579445.1 KEGG: fjo:Fjoh_2286 hypothetical protein YP_004579446.1 KEGG: cao:Celal_1620 hypothetical protein YP_004579447.1 PFAM: Protein of unknown function DUF2480; KEGG: cao:Celal_1619 hypothetical protein YP_004579448.1 PFAM: ABC transporter-like; KEGG: rbi:RB2501_07450 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004579449.1 KEGG: cao:Celal_1618 fes assembly suf system protein; TIGRFAM: SUF system FeS cluster assembly associated; PFAM: Protein of unknown function DUF59 YP_004579450.1 PFAM: Fe-S metabolism associated SufE; KEGG: cly:Celly_1517 Fe-S metabolism associated SufE YP_004579451.1 PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: fjo:Fjoh_1177 hypothetical protein YP_004579452.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: cat:CA2559_04465 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004579453.1 KEGG: cly:Celly_1515 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD YP_004579454.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: cao:Celal_1614 iron-regulated abc transporter atpase subunit sufc; SMART: ATPase, AAA+ type, core YP_004579455.1 KEGG: cat:CA2559_04450 hypothetical protein YP_004579456.1 KEGG: cat:CA2559_04440 hypothetical protein; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD YP_004579457.1 KEGG: rbi:RB2501_05910 scaffold protein for iron-sulfur cluster assembly; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_004579458.1 KEGG: mtt:Ftrac_0959 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004579459.1 KEGG: cly:Celly_0910 hypothetical protein YP_004579460.1 KEGG: fbc:FB2170_05295 hypothetical protein YP_004579461.1 PFAM: Thrombospondin, type 3-like repeat; KEGG: cat:CA2559_04415 hypothetical protein YP_004579462.1 KEGG: cat:CA2559_04405 hypothetical protein YP_004579463.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: cly:Celly_1511 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal YP_004579464.1 KEGG: cao:Celal_1610 hypothetical protein YP_004579465.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fps:FP0154 hydrolase YP_004579466.1 KEGG: fbc:FB2170_05320 branched-chain amino acid transport system carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein YP_004579467.1 KEGG: dfe:Dfer_0873 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004579469.1 KEGG: cao:Celal_1273 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_004579470.1 KEGG: fbc:FB2170_06595 hypothetical protein YP_004579471.1 TIGRFAM: Aspartate kinase region; KEGG: phe:Phep_2333 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004579472.1 KEGG: cat:CA2559_04710 probable X-pro aminopeptidase; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal YP_004579473.1 PFAM: BNR repeat; KEGG: cat:CA2559_04705 hypothetical protein YP_004579475.1 TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; KEGG: cly:Celly_1406 succinate dehydrogenase (or fumarate reductase) cytochrome subunit B, b558 family YP_004579476.1 TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; KEGG: cly:Celly_1407 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004579477.1 PFAM: Ferredoxin; KEGG: fjo:Fjoh_0675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_004579478.1 KEGG: gfo:GFO_0064 transmembrane MutS family DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal YP_004579479.1 KEGG: fbc:FB2170_05430 signaling protein without kinase domain; manually curated; PFAM: Signal transduction histidine kinase, internal region YP_004579480.1 KEGG: fbc:FB2170_05435 two-component system response regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579481.1 PFAM: Peptidase S46; KEGG: fps:FP0382 hypothetical protein YP_004579482.1 KEGG: gfo:GFO_3151 class-I/II aminotransferase; PFAM: Aminotransferase, class I/II YP_004579483.1 KEGG: fps:FP2423 hypothetical protein YP_004579484.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: zpr:ZPR_0476 carbon-nitrogen hydrolase YP_004579485.1 KEGG: cao:Celal_1177 hypothetical protein YP_004579486.1 PFAM: Phosphoribosyltransferase; KEGG: gfo:GFO_3532 phosphoribosyltransferases family protein YP_004579487.1 KEGG: zpr:ZPR_0480 hypothetical protein YP_004579488.1 KEGG: cly:Celly_1096 glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding YP_004579489.1 KEGG: cat:CA2559_01755 hypothetical protein YP_004579490.1 TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: cao:Celal_1168 exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004579491.1 PFAM: Aldo/keto reductase; KEGG: fbc:FB2170_07349 aldo/keto reductase YP_004579492.1 KEGG: fps:FP2413 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III YP_004579493.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: cat:CA2559_04500 hypothetical protein YP_004579494.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; KEGG: cat:CA2559_04495 OmpA family protein YP_004579495.1 KEGG: zpr:ZPR_4493 ribonuclease G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain YP_004579496.1 manually curated; KEGG: fjo:Fjoh_1533 hypothetical protein YP_004579497.1 KEGG: cly:Celly_1028 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_004579498.1 TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: zpr:ZPR_4491 A/G-specific adenine glycosylase; SMART: HhH-GPD domain YP_004579499.1 KEGG: fbc:FB2170_07474 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004579500.1 KEGG: zpr:ZPR_4489 gliding motility protein GldE; TIGRFAM: Gliding motility-associated protein GldE; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region YP_004579501.1 TIGRFAM: Gliding motility-associated lipoprotein, GldD; KEGG: coc:Coch_1383 protein involved in gliding motility GldD YP_004579502.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cly:Celly_1023 heavy metal transport/detoxification protein YP_004579503.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: cat:CA2559_02645 predicted permease YP_004579504.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: cly:Celly_1022 processing peptidase YP_004579505.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: cly:Celly_1021 peptidase M16 domain-containing protein YP_004579506.1 KEGG: cao:Celal_1087 hypothetical protein YP_004579507.1 TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: cao:Celal_1086 lsu ribosomal protein l21p; PFAM: Ribosomal protein L21 YP_004579508.1 TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: zpr:ZPR_4482 50S ribosomal protein L27; PFAM: Ribosomal protein L27 YP_004579509.1 KEGG: cat:CA2559_10658 RumB/ImpB like DNA repair protein; PFAM: DNA-repair protein, UmuC-like YP_004579510.1 KEGG: cao:Celal_3390 sos-response transcriptional repressors (RecA-mediatedautopeptidase)-like protein YP_004579511.1 PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: cly:Celly_1014 adenosylhomocysteinase YP_004579512.1 KEGG: cat:CA2559_03790 siderophore (surfactin) biosynthesis regulatory protein YP_004579513.1 PFAM: Geranylgeranylglyceryl phosphate synthase-like; TIGRFAM: Geranylgeranylglyceryl phosphate synthase-like; HAMAP: Geranylgeranylglyceryl phosphate synthase; KEGG: gfo:GFO_3065 geranylgeranylglyceryl phosphate synthase-like protein YP_004579514.1 KEGG: cat:CA2559_01550 hypothetical protein YP_004579515.1 KEGG: rbi:RB2501_08150 hypothetical protein; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_004579516.1 KEGG: cao:Celal_1073 transcriptional regulatory protein NadR YP_004579517.1 KEGG: cat:CA2559_01535 hypothetical protein YP_004579518.1 PFAM: Class I peptide chain release factor; KEGG: cly:Celly_1177 class I peptide chain release factor YP_004579519.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dfe:Dfer_3424 TonB-dependent receptor YP_004579520.1 KEGG: gfo:GFO_3049 secreted protein YP_004579521.1 TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: cly:Celly_1005 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic YP_004579522.1 PFAM: Histidine triad (HIT) protein; KEGG: fjo:Fjoh_1591 histidine triad (HIT) protein YP_004579523.1 KEGG: cat:CA2559_01690 hypothetical protein YP_004579524.1 KEGG: gfo:GFO_3045 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004579525.1 PFAM: Flavin reductase-like, FMN-binding; KEGG: fps:FP2350 hypothetical protein YP_004579526.1 KEGG: cly:Celly_1000 hypothetical protein YP_004579527.1 PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: fjo:Fjoh_1595 leucyl/phenylalanyl-tRNA--protein transferase YP_004579528.1 PFAM: Protein of unknown function DUF2490; KEGG: cao:Celal_1050 hypothetical protein YP_004579529.1 KEGG: cao:Celal_1049 hypothetical protein YP_004579530.1 KEGG: cly:Celly_0894 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase YP_004579531.1 KEGG: fbc:FB2170_07669 hypothetical protein YP_004579532.1 KEGG: gfo:GFO_3039 hypothetical protein YP_004579533.1 TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: cao:Celal_1039 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal YP_004579534.1 KEGG: fbc:FB2170_07684 bacitracin resistance protein; HAMAP: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA YP_004579535.1 KEGG: cat:CA2559_02140 hypothetical protein YP_004579536.1 KEGG: fbc:FB2170_07689 hypothetical protein YP_004579539.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: gfo:GFO_3035 cell division protein FtsX YP_004579540.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: cly:Celly_0905 leucyl-tRNA synthetase YP_004579541.1 KEGG: bcb:BCB4264_A3783 hypothetical protein YP_004579542.1 PFAM: Peptidase, membrane zinc metallopeptidase, KEGG: cly:Celly_0907 peptidase membrane zinc metallopeptidase YP_004579543.1 PFAM: Rhodococcus equi virulence-associated; KEGG: xbo:XBJ1_4101 hypothetical protein YP_004579544.1 KEGG: fjo:Fjoh_0036 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal YP_004579545.1 KEGG: fjo:Fjoh_0038 histidine kinase, dimerisation and phosphoacceptor region; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like YP_004579546.1 KEGG: fjo:Fjoh_0039 hypothetical protein YP_004579548.1 PFAM: Phage Tail Collar; KEGG: swd:Swoo_3173 tail collar domain-containing protein YP_004579549.1 KEGG: fps:FP1479 hypothetical protein YP_004579550.1 KEGG: cat:CA2559_01670 AsnC family regulatory protein; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004579551.1 KEGG: cat:CA2559_01665 saccharopine dehydrogenase, PFAM: Saccharopine dehydrogenase YP_004579552.1 PFAM: Protein of unknown function DUF423; KEGG: gfo:GFO_0104 hypothetical protein YP_004579553.1 TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; KEGG: cao:Celal_1029 phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising YP_004579554.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: gfo:GFO_0106 uroporphyrinogen-III synthase YP_004579555.1 KEGG: gfo:GFO_0107 membrane protein YP_004579556.1 KEGG: fbc:FB2170_07754 dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase, family 2 YP_004579557.1 TIGRFAM: Dihydroorotase multifunctional complex type; KEGG: cat:CA2559_01635 dihydroorotase; PFAM: Amidohydrolase 1 YP_004579558.1 KEGG: zpr:ZPR_0492 hypothetical protein YP_004579559.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gfo:GFO_0111 nucleoside-diphosphate-sugar epimerase YP_004579560.1 PFAM: Aminoacyl-tRNA synthetase, class Ib; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HAMAP: Tyrosyl-tRNA synthetase; KEGG: fjo:Fjoh_0550 tyrosyl-tRNA synthetase YP_004579561.1 KEGG: cat:CA2559_01845 hypothetical protein YP_004579562.1 KEGG: cat:CA2559_01830 possible acyl protein synthase/acyl-CoA reductase-like protein YP_004579563.1 PFAM: Carbohydrate-binding, CenC-like; KEGG: psm:PSM_A0166 endonuclease I YP_004579564.1 KEGG: cat:CA2559_01825 hypothetical protein YP_004579565.1 KEGG: gfo:GFO_0118 two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004579566.1 KEGG: rbi:RB2501_08410 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004579567.1 PFAM: Glycosyl transferase, family 28, C-terminal; KEGG: cly:Celly_0885 glycosyltransferase 28 domain-containing protein YP_004579568.1 KEGG: fjo:Fjoh_1336 tRNA (guanine-N(7)-)-methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase YP_004579569.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: fps:FP0369 hypothetical protein YP_004579570.1 KEGG: cao:Celal_1010 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_004579571.1 PFAM: ATPase-like, ParA/MinD; KEGG: fbc:FB2170_07879 hypothetical protein YP_004579572.1 PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: zpr:ZPR_0506 NifU-like/thioredoxin-like protein YP_004579573.1 HAMAP: Ferredoxin--NADP reductase; KEGG: cly:Celly_0879 ferredoxin--NADP reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004579574.1 PFAM: Ferredoxin; KEGG: cly:Celly_0878 ferredoxin YP_004579576.1 KEGG: fbc:FB2170_08099 hypothetical protein YP_004579577.1 KEGG: fps:FP0273 hypothetical protein YP_004579578.1 KEGG: cat:CA2559_04655 acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1 YP_004579579.1 PFAM: Uncharacterised protein family UPF0118; KEGG: shg:Sph21_2142 protein of unknown function UPF0118 YP_004579580.1 KEGG: fjo:Fjoh_1299 methyltransferase small; HAMAP: tRNA (adenine-N(6)-)-methyltransferase; PFAM: Methyltransferase small YP_004579581.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: cat:CA2559_04645 16S rRNA processing protein; PFAM: PRC-barrel YP_004579582.1 TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: zpr:ZPR_4435 30S ribosomal protein S16; PFAM: Ribosomal protein S16 YP_004579583.1 KEGG: cat:CA2559_04635 30S ribosomal protein S16 YP_004579584.1 KEGG: cly:Celly_1701 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Protein of unknown function DUF2383 YP_004579585.1 SMART: Polymerase/histidinol phosphatase, N-terminal; Exonuclease; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: cly:Celly_1702 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_004579586.1 KEGG: cat:CA2559_04950 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain YP_004579587.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: cao:Celal_2297 ATP-dependent clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP YP_004579588.1 PFAM: Protein of unknown function DUF58; KEGG: cat:CA2559_04945 hypothetical protein YP_004579591.1 KEGG: cat:CA2559_08896 transmembrane protein; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004579592.1 KEGG: cat:CA2559_08901 nitrate/nitrite DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579593.1 PFAM: Protein of unknown function DUF456; KEGG: cly:Celly_0848 hypothetical protein YP_004579594.1 PFAM: Penicillinase repressor; KEGG: cao:Celal_1988 transcriptional repressor, copy family YP_004579595.1 PFAM: Peptidase M56, BlaR1; KEGG: gfo:GFO_0077 hypothetical protein YP_004579596.1 KEGG: gfo:GFO_0074 hypothetical protein YP_004579597.1 PFAM: Protein of unknown function DUF1112; KEGG: chu:CHU_2434 hypothetical protein YP_004579599.1 PFAM: Glycosyl transferase, family 2; KEGG: fps:FP0211 glycosyl transferase, group 2 family protein YP_004579600.1 KEGG: fjo:Fjoh_1378 hypothetical protein YP_004579601.1 KEGG: fjo:Fjoh_3415 OmpA/MotB domain-containing protein YP_004579602.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: cao:Celal_1991 crossover junction endodeoxyribonuclease RuvC YP_004579603.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: cao:Celal_1992 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004579604.1 PFAM: cyclase; KEGG: cly:Celly_1814 hypothetical protein YP_004579605.1 KEGG: fbc:FB2170_03555 hypothetical protein YP_004579607.1 KEGG: wvi:Weevi_1112 hypothetical protein YP_004579609.1 KEGG: fps:FP1015 two-component system response regulatory protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579610.1 PFAM: Haem NO binding; KEGG: cat:CA2559_11538 guanylate cyclase-related protein YP_004579611.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; KEGG: zpr:ZPR_3573 sensory transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif YP_004579612.1 PFAM: FIST domain, N-terminal; FIST C domain; KEGG: cao:Celal_3061 fist c domain-containing protein YP_004579613.1 KEGG: zpr:ZPR_3575 histidine kinase/response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004579614.1 KEGG: cat:CA2559_11548 hypothetical protein YP_004579615.1 KEGG: zpr:ZPR_3577 two-component system response regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579616.1 PFAM: SCP-like extracellular; KEGG: gfo:GFO_1840 SCP-like extracellular protein YP_004579617.1 KEGG: cly:Celly_2548 hypothetical protein YP_004579618.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: zpr:ZPR_1051 TPR repeat protein YP_004579619.1 KEGG: cao:Celal_0100 hypothetical protein YP_004579620.1 KEGG: cao:Celal_0100 hypothetical protein YP_004579621.1 PFAM: Polysaccharide biosynthesis protein; KEGG: cao:Celal_3056 capsular polysaccharide biosynthesis protein YP_004579622.1 PFAM: Glycosyl transferase, group 1; KEGG: zpr:ZPR_1049 glycosyltransferase YP_004579623.1 PFAM: Glycoside hydrolase, family 5; KEGG: zpr:ZPR_1048 glycosidase YP_004579624.1 KEGG: zpr:ZPR_1047 hypothetical protein YP_004579625.1 KEGG: zpr:ZPR_1046 integral hypothetical protein YP_004579626.1 KEGG: zpr:ZPR_1045 glycosyl transferase, family 2; PFAM: Signal transduction response regulator, receiver region; Glycosyl transferase, family 2; SMART: Signal transduction response regulator, receiver region YP_004579627.1 PFAM: Glycosyl transferase, family 2; KEGG: cly:Celly_1227 response regulator receiver protein YP_004579628.1 TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: zpr:ZPR_2216 phosphomannose isomerase type I; PFAM: Mannose-6-phosphate isomerase, type I YP_004579629.1 KEGG: fbc:FB2170_03440 phosphonate metabolism Zn-ribbon-containing protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SMART: PhnA protein N-terminal, proteobacterial YP_004579630.1 KEGG: fbc:FB2170_03455 hypothetical protein YP_004579631.1 PFAM: Peptidase M56, BlaR1; KEGG: fbc:FB2170_03450 TonB YP_004579632.1 PFAM: Penicillinase repressor; KEGG: cly:Celly_1611 CopY family transcriptional repressor YP_004579633.1 KEGG: cly:Celly_1612 beta-Ala-His dipeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_004579634.1 PFAM: UspA; KEGG: cat:CA2559_01350 universal stress protein YP_004579635.1 KEGG: cat:CA2559_01345 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090 YP_004579636.1 KEGG: zpr:ZPR_0574 transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal YP_004579637.1 KEGG: zpr:ZPR_0575 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2 YP_004579638.1 PFAM: Sporulation/cell division region, bacteria; KEGG: cat:CA2559_01325 hypothetical protein YP_004579639.1 PFAM: Cytochrome c, class I; KEGG: cly:Celly_1856 cytochrome c class I YP_004579640.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: cao:Celal_2059 quinol:cytochrome c oxidoreductase iron-sulfur protein precursor YP_004579641.1 PFAM: Polysulphide reductase, NrfD; KEGG: cly:Celly_1858 polysulfide reductase NrfD YP_004579642.1 KEGG: cao:Celal_2061 quinol:cytochrome c oxidoreductase membrane protein YP_004579643.1 PFAM: Cytochrome c, class I; KEGG: fps:FP0376 cytochrome c family protein YP_004579644.1 KEGG: fbc:FB2170_03065 hypothetical protein YP_004579645.1 PFAM: Cytochrome C oxidase subunit II, transmembrane region; KEGG: cly:Celly_1862 cytochrome c oxidase subunit II YP_004579646.1 PFAM: Cytochrome c oxidase, subunit I; KEGG: fps:FP0379 cytochrome c oxidase, subunit I precursor YP_004579647.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: cly:Celly_1865 Holliday junction ATP-dependent DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal YP_004579648.1 PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: cly:Celly_1874 hypothetical protein YP_004579651.1 PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: zpr:ZPR_0588 malic enzyme YP_004579652.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: cly:Celly_1876 Holliday junction ATP-dependent DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal YP_004579653.1 KEGG: fbc:FB2170_03020 hypothetical protein YP_004579654.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: gfo:GFO_0183 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein YP_004579655.1 PFAM: VanZ like protein; KEGG: cat:CA2559_01200 hypothetical protein YP_004579656.1 KEGG: cat:CA2559_01195 TonB YP_004579657.1 KEGG: cat:CA2559_01190 TonB YP_004579658.1 KEGG: gfo:GFO_0187 hypothetical protein YP_004579659.1 TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: gfo:GFO_0188 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004579660.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: gfo:GFO_0189 cytochrome c oxidase subunit III YP_004579661.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: cao:Celal_2083 cytochrome c oxidase subunit III YP_004579662.1 KEGG: cly:Celly_1885 hypothetical protein YP_004579663.1 KEGG: fbc:FB2170_02975 hypothetical protein YP_004579664.1 PFAM: Copper chaperone SCO1/SenC; KEGG: cly:Celly_1887 electron transport protein SCO1/SenC YP_004579665.1 PFAM: Protein of unknown function DUF420; KEGG: fjo:Fjoh_1664 hypothetical protein YP_004579666.1 KEGG: cao:Celal_2088 hypothetical protein YP_004579667.1 PFAM: ABC transporter-like; KEGG: rbi:RB2501_03535 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004579668.1 KEGG: cly:Celly_1891 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF214, permase predicted YP_004579669.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: fbc:FB2170_02930 ABC transporter ATP-binding protein YP_004579670.1 KEGG: fbc:FB2170_02925 transport/efflux component protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_004579671.1 PFAM: Outer membrane efflux protein; KEGG: fjo:Fjoh_1671 outer membrane efflux protein YP_004579672.1 KEGG: cat:CA2559_01100 glycoprotease family exported protein; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease YP_004579673.1 PFAM: Mechanosensitive ion channel MscS; KEGG: fbc:FB2170_13748 mechanosensitive ion channel family protein YP_004579674.1 PFAM: Protein of unknown function DUF1304; KEGG: mmw:Mmwyl1_1367 hypothetical protein YP_004579675.1 KEGG: cat:CA2559_01090 hypothetical protein YP_004579676.1 KEGG: cat:CA2559_00775 iron-regulated protein FrpC; PFAM: PKD; CUB; SMART: PKD; CUB YP_004579677.1 PFAM: NIF system FeS cluster assembly, NifU, C-terminal; NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; KEGG: zpr:ZPR_0613 NifU related protein YP_004579678.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: cat:CA2559_00770 hypothetical protein YP_004579679.1 PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; KEGG: cat:CA2559_01910 autolysin sensor kinase YP_004579681.1 KEGG: cao:Celal_2104 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004579682.1 PFAM: Bacterial transferase hexapeptide repeat; KEGG: fjo:Fjoh_1678 carbonic anhydrase YP_004579683.1 PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: fps:FP2099 glutamate racemase YP_004579684.1 PFAM: Outer membrane chaperone Skp (OmpH); KEGG: cat:CA2559_04305 outer membrane protein YP_004579685.1 PFAM: Outer membrane chaperone Skp (OmpH); KEGG: fjo:Fjoh_1689 outer membrane chaperone Skp (OmpH) YP_004579686.1 manually curated; TIGRFAM: Outer membrane assembly protein, YaeT; KEGG: cat:CA2559_04315 outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number YP_004579687.1 KEGG: fjo:Fjoh_1691 undecaprenyl diphosphate synthase; manually curated; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase YP_004579688.1 KEGG: fjo:Fjoh_1692 hypothetical protein YP_004579689.1 KEGG: fbc:FB2170_02740 inorganic polyphosphate/ATP-NAD kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_004579690.1 KEGG: gfo:GFO_0216 CBS domain-containing protein YP_004579691.1 PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: fjo:Fjoh_1695 pyridoxine 5'-phosphate synthase YP_004579692.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cat:CA2559_04345 alpha/beta superfamily hydrolase YP_004579693.1 PFAM: Membrane protein of unknown function; KEGG: rbi:RB2501_03305 hypothetical protein YP_004579694.1 KEGG: zpr:ZPR_0628 trigger factor; TIGRFAM: Trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial YP_004579695.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: zpr:ZPR_0629 ATP-dependent Clp protease proteolytic subunit 2; PFAM: Peptidase S14, ClpP YP_004579696.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: cat:CA2559_04375 ATP-dependent protease ATP-binding subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal YP_004579697.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_1476 GNAT family acetyltransferase YP_004579698.1 PFAM: GH3 auxin-responsive promoter; KEGG: zpr:ZPR_0799 hypothetical protein YP_004579699.1 KEGG: cao:Celal_2123 hypothetical protein YP_004579700.1 KEGG: gfo:GFO_2387 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21 YP_004579701.1 KEGG: cao:Celal_2122 outer membrane protein YP_004579702.1 KEGG: cly:Celly_1931 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165 YP_004579703.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: cat:CA2559_04865 deoxynucleoside kinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase YP_004579704.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cly:Celly_1929 tRNA/rRNA methyltransferase SpoU YP_004579705.1 KEGG: cat:CA2559_05155 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; manually curated; TIGRFAM: DNA mismatch repair protein MutS, type 1; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; HAMAP: DNA mismatch repair protein MutS, type 1 YP_004579706.1 KEGG: tva:TVAG_030630 viral A-type inclusion protein YP_004579707.1 KEGG: cao:Celal_0990 metal-dependent phosphohydrolase hd sub domain protein YP_004579708.1 TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: cly:Celly_0579 valyl-tRNA synthetase YP_004579709.1 PFAM: Protein of unknown function DUF1573; KEGG: rbi:RB2501_02385 hypothetical protein YP_004579710.1 KEGG: cly:Celly_0581 PDZ/DHR/GLGF domain-containing protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_004579711.1 KEGG: fbc:FB2170_16476 aspartate aminotransferase; PFAM: Aminotransferase, class I/II YP_004579712.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: fjo:Fjoh_0218 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004579713.1 KEGG: cly:Celly_0584 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004579714.1 KEGG: cao:Celal_2308 RNA polymerase sigma-70 factor YP_004579715.1 KEGG: fjo:Fjoh_2364 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein YP_004579716.1 KEGG: cat:CA2559_07876 hypothetical protein YP_004579717.1 PFAM: Glycosyl transferase, family 2; KEGG: fps:FP1465 glycosyl transferase, group 2 family protein YP_004579718.1 KEGG: cao:Celal_2306 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004579719.1 KEGG: gfo:GFO_2703 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB YP_004579720.1 TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cly:Celly_0589 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004579721.1 KEGG: gfo:GFO_2705 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide TPR-1; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat; Signal transduction response regulator, receiver region YP_004579722.1 PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: cat:CA2559_07846 tetraacyldisaccharide 4'-kinase YP_004579723.1 KEGG: gfo:GFO_2707 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3 YP_004579724.1 PFAM: Protein of unknown function DUF164; KEGG: cat:CA2559_07836 hypothetical protein YP_004579725.1 PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: zpr:ZPR_3756 peptide methionine sulfoxide reductase YP_004579726.1 PFAM: Methyltransferase type 11; KEGG: cat:CA2559_04785 hypothetical SAM-dependent methyltransferase YP_004579727.1 KEGG: cao:Celal_2296 hypothetical protein YP_004579728.1 TIGRFAM: Kynureninase; KEGG: cat:CA2559_07761 kynureninase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004579730.1 KEGG: cat:CA2559_07400 hypothetical protein; PFAM: Monooxygenase, FAD-binding YP_004579731.1 PFAM: Endoribonuclease L-PSP; KEGG: cat:CA2559_07405 endoribonuclease L-PSP YP_004579732.1 PFAM: Aldehyde dehydrogenase; KEGG: cat:CA2559_07430 hypothetical protein YP_004579733.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: gfo:GFO_0169 excinuclease ABC subunit C YP_004579734.1 KEGG: cat:CA2559_07435 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004579735.1 TIGRFAM: 3-hydroxyanthranilic acid dioxygenase; KEGG: chu:CHU_3382 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase YP_004579736.1 KEGG: cat:CA2559_07440 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase YP_004579737.1 KEGG: cat:CA2559_07450 O-methyltransferase; PFAM: O-methyltransferase, family 3 YP_004579738.1 KEGG: cao:Celal_0709 hypothetical protein YP_004579739.1 KEGG: cly:Celly_1110 hypothetical protein YP_004579740.1 KEGG: cao:Celal_3248 fad-dependent pyridine nucleotide-disulfide oxidoreductase YP_004579741.1 PFAM: Abortive infection protein; KEGG: cly:Celly_0942 abortive infection protein YP_004579742.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: mtt:Ftrac_3666 peptidase S8 and S53 subtilisin kexin sedolisin YP_004579743.1 PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; KEGG: cly:Celly_0600 sec-independent translocation protein MttA/Hcf106 YP_004579744.1 HAMAP: Inorganic pyrophosphatase; KEGG: cly:Celly_1958 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004579745.1 KEGG: cat:CA2559_11978 hypothetical protein YP_004579746.1 KEGG: rbi:RB2501_07210 hypothetical protein YP_004579747.1 KEGG: cly:Celly_2184 hypothetical protein YP_004579749.1 KEGG: cao:Celal_0584 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004579750.1 PFAM: FecR protein; KEGG: cao:Celal_0585 anti-FecI sigma factor, FecR YP_004579751.1 PFAM: TonB-dependent receptor, plug; KEGG: cly:Celly_2181 TonB-dependent receptor plug YP_004579752.1 KEGG: cat:CA2559_13268 hypothetical protein YP_004579753.1 KEGG: cly:Celly_1956 pyruvate dehydrogenase (acetyl-transferring); PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004579754.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: gfo:GFO_0293 electron transfer flavoprotein subunit beta YP_004579755.1 PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: cat:CA2559_13283 electron transfer flavoprotein, alpha subunit YP_004579756.1 PFAM: Protein of unknown function DUF151; UvrB/UvrC protein; KEGG: fjo:Fjoh_1472 hypothetical protein YP_004579757.1 PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; KEGG: cat:CA2559_13293 nucleoside transporter YP_004579758.1 PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: cao:Celal_2147 thymidylate synthase YP_004579759.1 PFAM: Glycoside hydrolase, family 13, N-terminal; KEGG: rbi:RB2501_03230 isoamylase-like protein YP_004579760.1 PFAM: Dihydrofolate reductase region; KEGG: gfo:GFO_0279 dihydrofolate reductase YP_004579761.1 KEGG: rci:RCIX213 glycosyltransferase (group 1) YP_004579762.1 PFAM: FAD dependent oxidoreductase; KEGG: cly:Celly_3123 FAD dependent oxidoreductase YP_004579763.1 TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: cly:Celly_1904 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004579764.1 TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: cao:Celal_3383 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II YP_004579765.1 KEGG: cao:Celal_1717 hypothetical protein YP_004579766.1 PFAM: Amidohydrolase 1; KEGG: fbc:FB2170_03290 Xaa-Pro dipeptidase family enzyme YP_004579767.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: coc:Coch_0923 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004579768.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cat:CA2559_13373 pigmentation and extracellular proteinase regulator YP_004579769.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: fps:FP0404 3-deoxy-D-manno-octulosonic-acid transferase YP_004579770.1 KEGG: fbc:FB2170_07100 hypothetical protein YP_004579771.1 KEGG: cat:CA2559_00665 endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A YP_004579772.1 PFAM: Glycosyl transferase, family 2; KEGG: fjo:Fjoh_0448 glycosyl transferase YP_004579773.1 TIGRFAM: Methyltransferase FkbM; KEGG: ter:Tery_1754 FkbM family methyltransferase YP_004579774.1 KEGG: cao:Celal_0727 beta-ketoacyl-acyl-carrier-protein synthase I; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YP_004579775.1 TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: cat:CA2559_07640 glycine cleavage system protein P; PFAM: Glycine cleavage system P-protein, N-terminal YP_004579776.1 KEGG: gfo:GFO_2874 membrane protein YP_004579777.1 KEGG: cat:CA2559_07630 glycine dehydrogenase YP_004579778.1 KEGG: cat:CA2559_07625 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004579779.1 KEGG: cly:Celly_2090 hypothetical protein YP_004579780.1 PFAM: Methyltransferase type 11; KEGG: cly:Celly_2091 methyltransferase type 11 YP_004579781.1 KEGG: cly:Celly_2092 hypothetical protein YP_004579782.1 KEGG: mtt:Ftrac_2363 hypothetical protein YP_004579783.1 PFAM: HTH transcriptional regulator, ArsR; KEGG: cao:Celal_0717 transcriptional regulators-like protein YP_004579784.1 KEGG: cly:Celly_2107 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F YP_004579785.1 TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: zpr:ZPR_3904 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004579786.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: cao:Celal_0670 5-(carboxyamino)imidazole ribonucleotide synthase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YP_004579787.1 PFAM: Adenylate kinase; Phosphoribosyltransferase; TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: gfo:GFO_2868 adenylate kinase/hypoxanthine-guanine phosphoribosyltransferase fusion protein YP_004579788.1 TIGRFAM: GTP-binding protein Obg/CgtA; Small GTP-binding protein; HAMAP: GTPase obg; KEGG: gfo:GFO_2867 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related YP_004579789.1 KEGG: cao:Celal_0667 hypothetical protein YP_004579790.1 PFAM: Alpha-2-macroglobulin, N-terminal; TonB-dependent receptor, plug; KEGG: cly:Celly_2121 alpha-2-macroglobulin domain-containing protein YP_004579791.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: cat:CA2559_05590 hypothetical protein YP_004579792.1 KEGG: cly:Celly_2122 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal YP_004579793.1 KEGG: chu:CHU_1582 hypothetical protein YP_004579794.1 PFAM: Cell cycle protein; KEGG: rbi:RB2501_08920 rod shape-determining protein RodA YP_004579795.1 KEGG: fbc:FB2170_08539 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain YP_004579796.1 TIGRFAM: Cell shape-determining protein MreD; KEGG: gfo:GFO_2960 hypothetical protein YP_004579797.1 KEGG: gfo:GFO_2959 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC YP_004579798.1 TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; KEGG: cao:Celal_0904 cell shape determining protein, MreB/mrl family; SMART: Actin/actin-like YP_004579799.1 PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; KEGG: gfo:GFO_2957 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme, formylation region YP_004579800.1 PFAM: GAF; KEGG: cly:Celly_0774 GAF sensor protein YP_004579801.1 PFAM: Exosortase EpsH-related; KEGG: cat:CA2559_00545 hypothetical protein YP_004579802.1 KEGG: cat:CA2559_00540 hypothetical protein YP_004579803.1 KEGG: gfo:GFO_2952 secreted protein YP_004579804.1 PFAM: Heavy metal transport/detoxification protein; KEGG: rbi:RB2501_04660 hypothetical protein YP_004579805.1 PFAM: TonB-dependent receptor, beta-barrel; KEGG: cly:Celly_0772 TonB-dependent receptor YP_004579806.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cly:Celly_0771 metal transport-related, exported protein YP_004579807.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: cat:CA2559_00670 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1 YP_004579808.1 KEGG: fps:FP1984 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10 YP_004579809.1 KEGG: gfo:GFO_3594 membrane protein containing preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004579810.1 KEGG: cat:CA2559_00685 hypothetical protein YP_004579811.1 KEGG: coc:Coch_0313 hypothetical protein YP_004579812.1 KEGG: cat:CA2559_00695 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core YP_004579813.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: gfo:GFO_3590 (dimethylallyl)adenosine tRNA methylthiotransferase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM YP_004579814.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: cat:CA2559_00715 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain YP_004579815.1 PFAM: Ureohydrolase; KEGG: zpr:ZPR_4151 arginase YP_004579816.1 KEGG: cat:CA2559_00725 lipoprotein, TIGRFAM: Gliding motility-associated lipoprotein GldK; PFAM: Sulphatase-modifying factor YP_004579817.1 TIGRFAM: Gliding motility-associated protein, GldL; KEGG: gfo:GFO_3014 gliding motility protein GldL YP_004579818.1 TIGRFAM: Gliding motility-associated protein GldM; KEGG: fjo:Fjoh_1855 hypothetical protein YP_004579819.1 TIGRFAM: Gliding motility associated protein GldN; KEGG: cat:CA2559_00740 hypothetical protein YP_004579820.1 PFAM: FAD dependent oxidoreductase; KEGG: cly:Celly_0755 FAD dependent oxidoreductase YP_004579821.1 KEGG: cly:Celly_0754 hypothetical protein YP_004579822.1 KEGG: cly:Celly_0753 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004579823.1 TIGRFAM: Secretion protein HlyD; KEGG: fbc:FB2170_08724 secretion protein HlyD YP_004579824.1 PFAM: Acriflavin resistance protein; KEGG: cao:Celal_0873 acriflavin resistance protein YP_004579825.1 PFAM: Outer membrane efflux protein; KEGG: rbi:RB2501_09050 outer membrane protein-like protein YP_004579826.1 KEGG: cly:Celly_0752 hypothetical protein YP_004579827.1 KEGG: cao:Celal_0871 hypothetical protein YP_004579828.1 PFAM: Integrase, catalytic core, phage; KEGG: rbi:RB2501_14074 hypothetical protein YP_004579831.1 KEGG: bfr:BF0515 hypothetical protein YP_004579833.1 KEGG: cat:CA2559_03965 hypothetical protein YP_004579835.1 KEGG: fnu:FN1514 phophatidylinositol-4-phosphate 5-kinase YP_004579836.1 PFAM: Transposase, IS116/IS110/IS902; KEGG: cao:Celal_0237 transposase IS116/is110/IS902 family protein YP_004579837.1 KEGG: ppu:PP_2661 hypothetical protein YP_004579840.1 PFAM: Peptidase M24, structural domain; Creatinase; KEGG: cbl:CLK_0481 M24 family peptidase YP_004579841.1 KEGG: hau:Haur_1799 hypothetical protein YP_004579842.1 KEGG: ddf:DEFDS_2120 hypothetical protein; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004579847.1 KEGG: coc:Coch_0676 hypothetical protein YP_004579849.1 KEGG: fba:FIC_01210 hypothetical protein YP_004579850.1 KEGG: fbc:FB2170_15403 hypothetical protein YP_004579852.1 KEGG: cat:CA2559_00315 hypothetical protein YP_004579853.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: cao:Celal_3230 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal YP_004579854.1 HAMAP: DNA polymerase IV; KEGG: cao:Celal_3229 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like YP_004579855.1 KEGG: cly:Celly_3191 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004579856.1 TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: cat:CA2559_12883 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I YP_004579857.1 TIGRFAM: Glycerate kinase; KEGG: cao:Celal_3853 glycerate kinase; PFAM: Glycerate kinase YP_004579858.1 KEGG: cao:Celal_3852 sss sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter YP_004579859.1 PFAM: Glycoside hydrolase, family 37; KEGG: cly:Celly_0702 glycoside hydrolase family 37 YP_004579860.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cly:Celly_0703 TonB-dependent receptor plug YP_004579861.1 KEGG: cao:Celal_3849 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004579863.1 KEGG: rbi:RB2501_05395 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004579864.1 KEGG: fjo:Fjoh_4199 hypothetical protein YP_004579865.1 KEGG: zpr:ZPR_3092 hypothetical protein YP_004579866.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cly:Celly_3049 tRNA/rRNA methyltransferase SpoU YP_004579867.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: zpr:ZPR_0778 GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2 YP_004579868.1 KEGG: cly:Celly_0707 alkaline phosphatase YP_004579869.1 TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: cly:Celly_0705 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related YP_004579870.1 PFAM: C-type lectin; KEGG: fjo:Fjoh_1720 C-type lectin domain-containing protein YP_004579871.1 KEGG: cly:Celly_0699 hypothetical protein YP_004579872.1 PFAM: Protein of unknown function DUF477; KEGG: zpr:ZPR_3308 hypothetical protein YP_004579873.1 KEGG: cao:Celal_0807 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF477 YP_004579874.1 PFAM: Protein of unknown function DUF477; KEGG: cly:Celly_0697 hypothetical protein YP_004579875.1 PFAM: LemA; KEGG: rbi:RB2501_09195 hypothetical protein YP_004579876.1 KEGG: zpr:ZPR_0785 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004579877.1 PFAM: Peptidase M23; KEGG: cao:Celal_0803 peptidase M23 YP_004579878.1 KEGG: cly:Celly_0693 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1 YP_004579879.1 PFAM: GSCFA; KEGG: cly:Celly_0692 GSCFA domain-containing protein YP_004579880.1 KEGG: cly:Celly_0691 hypothetical protein YP_004579881.1 KEGG: ran:Riean_1310 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004579882.1 KEGG: cat:CA2559_05350 phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase); PFAM: Aromatic amino acid hydroxylase, C-terminal YP_004579883.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cat:CA2559_05345 transcriptional regulator, TetR family protein YP_004579884.1 KEGG: cat:CA2559_05340 phenylacetate-CoA oxygenase, PaaK subunit; PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin YP_004579885.1 KEGG: cat:CA2559_05335 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic YP_004579886.1 KEGG: cat:CA2559_05330 phenylacetic acid degradation B; TIGRFAM: Phenylacetic acid degradation B; PFAM: Phenylacetic acid degradation B YP_004579887.1 KEGG: cat:CA2559_05320 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic YP_004579888.1 KEGG: cat:CA2559_05315 phenylacetic acid degradation protein; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Protein of unknown function DUF59 YP_004579889.1 PFAM: Crotonase, core; KEGG: cat:CA2559_05310 enoyl-CoA hydratase/isomerase PhaB YP_004579890.1 KEGG: cat:CA2559_05300 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004579891.1 PFAM: 23S rRNA-associated protein; KEGG: gfo:GFO_3324 hypothetical protein YP_004579892.1 KEGG: cat:CA2559_05295 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004579893.1 KEGG: cat:CA2559_05285 acetyl-CoA acetyltransferase; TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase YP_004579894.1 TIGRFAM: Phenylacetic acid degradation protein paaN; KEGG: cat:CA2559_05275 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; MaoC-like dehydratase YP_004579895.1 KEGG: cat:CA2559_05250 endo/excinuclease amino terminal domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal YP_004579896.1 PFAM: Crotonase, core; KEGG: cat:CA2559_05265 enoyl-CoA hydratase/isomerase YP_004579897.1 KEGG: chu:CHU_3058 hypothetical protein YP_004579898.1 PFAM: Bacterial transferase hexapeptide repeat; KEGG: cat:CA2559_05255 phenylacetic acid degradation protein YP_004579899.1 KEGG: zpr:ZPR_3650 AraC-type DNA-binding domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004579900.1 PFAM: Aldehyde dehydrogenase; KEGG: hse:Hsero_3530 NAD-dependent aldehyde dehydrogenase YP_004579901.1 KEGG: msv:Mesil_2322 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004579902.1 KEGG: aau:AAur_3606 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal YP_004579903.1 KEGG: cat:CA2559_05245 AsnC-family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004579904.1 KEGG: cat:CA2559_05240 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex; manually curated; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004579905.1 TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: cat:CA2559_05235 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV YP_004579906.1 KEGG: cat:CA2559_05225 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal YP_004579907.1 KEGG: cly:Celly_1872 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS YP_004579908.1 TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: cao:Celal_2675 hydroxymethylpyrimidine synthase; PFAM: Thiamine biosynthesis protein ThiC YP_004579909.1 KEGG: cly:Celly_1870 thiamine phosphate pyrophosphorylase YP_004579910.1 TIGRFAM: Conserved hypothetical protein CHP02436; KEGG: cni:Calni_1167 hypothetical protein YP_004579911.1 KEGG: fjo:Fjoh_1601 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004579912.1 HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: cly:Celly_1869 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase YP_004579913.1 KEGG: cly:Celly_1868 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis YP_004579914.1 KEGG: cao:Celal_2679 tyrosine lyase thih; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM YP_004579915.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: chu:CHU_0245 HesA/MoeB/ThiF family protein YP_004579916.1 KEGG: pfu:PF1298 endonuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like) YP_004579917.1 KEGG: cly:Celly_0689 hypothetical protein YP_004579918.1 KEGG: fjo:Fjoh_1908 urocanate hydratase; PFAM: Urocanase YP_004579919.1 manually curated; KEGG: gfo:GFO_0236 hypothetical protein YP_004579920.1 KEGG: fps:FP1958 hypothetical protein YP_004579921.1 KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein YP_004579922.1 KEGG: cat:CA2559_00645 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding Lysin subgroup YP_004579923.1 PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: fjo:Fjoh_1914 glutamate-1-semialdehyde aminotransferase YP_004579925.1 KEGG: cly:Celly_0683 hypothetical protein YP_004579926.1 KEGG: pha:PSHAa2383 hypothetical protein YP_004579928.1 KEGG: cly:Celly_0677 lysyl-tRNA synthetase; manually curated; TIGRFAM: Lysyl-tRNA synthetase, class II; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; HAMAP: Lysyl-tRNA synthetase YP_004579929.1 KEGG: cly:Celly_0676 hypothetical protein YP_004579930.1 KEGG: fjo:Fjoh_1921 hypothetical protein YP_004579931.1 PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: cly:Celly_0675 octanoyltransferase YP_004579932.1 KEGG: fjo:Fjoh_3297 hypothetical protein YP_004579933.1 KEGG: fbc:FB2170_00880 hypothetical protein YP_004579934.1 KEGG: dfe:Dfer_2155 hypothetical protein YP_004579935.1 KEGG: ote:Oter_4064 hypothetical protein YP_004579936.1 KEGG: dfe:Dfer_4525 parallel beta-helix repeat protein YP_004579937.1 KEGG: pmz:HMPREF0659_A6148 hypothetical protein YP_004579938.1 KEGG: gfo:GFO_3477 secreted protein YP_004579939.1 KEGG: lby:Lbys_1636 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_004579940.1 KEGG: fjo:Fjoh_1276 hypothetical protein YP_004579941.1 PFAM: Tetratricopeptide TPR-1; KEGG: chu:CHU_0283 TPR repeat-containing protein YP_004579943.1 KEGG: cat:CA2559_05535 ribonuclease HII YP_004579944.1 KEGG: cly:Celly_0672 ribonuclease H; PFAM: Ribonuclease HII/HIII YP_004579945.1 KEGG: cao:Celal_0777 hypothetical protein YP_004579946.1 KEGG: psn:Pedsa_2464 HRDC domain protein; PFAM: Helicase/RNase D C-terminal, HRDC domain; SMART: Helicase/RNase D C-terminal, HRDC domain; ATPase, AAA+ type, core YP_004579947.1 KEGG: cat:CA2559_06620 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004579948.1 PFAM: Anhydro-N-acetylmuramic acid kinase; KEGG: cat:CA2559_06625 hypothetical protein YP_004579949.1 PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; KEGG: cly:Celly_2037 Glu/Leu/Phe/Val dehydrogenase YP_004579950.1 KEGG: swd:Swoo_2690 sodium/proton antiporter; HAMAP: Na+/H+ antiporter NhaB; PFAM: Na+/H+ antiporter NhaB YP_004579951.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: fbc:FB2170_17426 biopolymer transport protein YP_004579952.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: zpr:ZPR_3933 ExbD/TolR family biopolymer transport protein YP_004579953.1 PFAM: Tol-Pal system, TolA; KEGG: cat:CA2559_01195 TonB YP_004579954.1 KEGG: fbc:FB2170_17416 hypothetical protein YP_004579955.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: fps:FP0541 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase, central; Mur ligase, C-terminal YP_004579956.1 KEGG: gfo:GFO_0154 hypothetical protein YP_004579957.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; manually curated; KEGG: fbc:FB2170_17396 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase YP_004579958.1 manually curated; TIGRFAM: Gliding motility-associated lipoprotein GldJ; KEGG: cat:CA2559_05475 lipoprotein, PFAM: Sulphatase-modifying factor YP_004579959.1 KEGG: cat:CA2559_05470 hypothetical protein YP_004579960.1 KEGG: fps:FP1387 hypothetical protein YP_004579961.1 KEGG: fjo:Fjoh_1554 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding YP_004579962.1 TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y; KEGG: cat:CA2559_05455 pyruvate dehydrogenase complex, E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component YP_004579963.1 TIGRFAM: Dihydrolipoamide acetyltransferase, long form; KEGG: cat:CA2559_05450 dihydrolipoamide acetyltransferase component (E2) of pyruvatedehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004579964.1 PFAM: Peptidase M28; KEGG: gfo:GFO_2887 M28 family peptidase YP_004579965.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fbc:FB2170_17351 short-chain dehydrogenase/reductase family oxidoreductase YP_004579967.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gmc:GY4MC1_1738 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004579968.1 KEGG: cat:CA2559_05890 hypothetical protein YP_004579969.1 KEGG: cpi:Cpin_4076 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat YP_004579970.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: cao:Celal_0588 arginyl-tRNA synthetase YP_004579971.1 KEGG: fjo:Fjoh_0451 hypothetical protein YP_004579972.1 KEGG: fbc:FB2170_17321 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase YP_004579973.1 KEGG: cao:Celal_0742 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00341; PFAM: Protein of unknown function DUF389 YP_004579974.1 PFAM: ABC transporter-like; KEGG: fbc:FB2170_17311 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004579975.1 PFAM: Protein of unknown function DUF140; KEGG: fps:FP1378 ABC transporter permease YP_004579976.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: cat:CA2559_07660 alkaline phosphatase YP_004579977.1 KEGG: cat:CA2559_07911 phosphatidylserine decarboxylase YP_004579978.1 PFAM: Phosphatidylserine decarboxylase-related; TIGRFAM: Phosphatidylserine decarboxylase-related protein; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: cat:CA2559_07916 phosphatidylserine decarboxylase proenzyme YP_004579979.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: zpr:ZPR_0806 phosphatidate cytidylyltransferase YP_004579980.1 KEGG: zpr:ZPR_0807 hypothetical protein YP_004579981.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: cat:CA2559_07931 transmembrane AAA-metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular YP_004579982.1 KEGG: zpr:ZPR_0809 hypothetical protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein YP_004579983.1 KEGG: fbc:FB2170_16396 biotin--(acetyl-CoA carboxylase) synthetase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase YP_004579984.1 KEGG: fjo:Fjoh_2603 hypothetical protein YP_004579985.1 PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: cly:Celly_0569 orotate phosphoribosyltransferase YP_004579986.1 PFAM: NUDIX hydrolase domain; KEGG: fbc:FB2170_16381 orotate phosphoribosyltransferase YP_004579987.1 KEGG: sli:Slin_0177 hypothetical protein YP_004579988.1 PFAM: Peptidase M14, carboxypeptidase A; KEGG: cly:Celly_0567 peptidase M14 carboxypeptidase A YP_004579989.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: cao:Celal_1218 sulphate transporter YP_004579990.1 PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: coc:Coch_1371 phosphopantetheine adenylyltransferase YP_004579991.1 KEGG: cao:Celal_3412 hypothetical protein YP_004579992.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: cao:Celal_2335 D-alanine--D-alanine ligase YP_004579993.1 KEGG: cat:CA2559_08001 hypothetical protein; PFAM: PASTA; SMART: PASTA YP_004579994.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: zpr:ZPR_0822 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4 YP_004579995.1 KEGG: fjo:Fjoh_4905 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328 YP_004579996.1 KEGG: cao:Celal_2339 ssu ribosomal protein s31p YP_004579997.1 KEGG: fbc:FB2170_16326 hypothetical protein YP_004579998.1 KEGG: cao:Celal_2342 hypothetical protein YP_004579999.1 PFAM: Beta-lactamase-related; KEGG: rbi:RB2501_12082 serine-type D-Ala-D-Ala carboxypeptidase YP_004580000.1 KEGG: cly:Celly_0063 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580001.1 KEGG: sfr:Sfri_3708 hypothetical protein YP_004580002.1 PFAM: Protein of unknown function DUF2132; KEGG: aha:AHA_3462 hypothetical protein YP_004580003.1 KEGG: zpr:ZPR_4586 hypothetical protein YP_004580004.1 PFAM: Cytochrome c, class I YP_004580005.1 PFAM: DNA alkylation repair enzyme; KEGG: fbc:FB2170_07649 hypothetical protein YP_004580006.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cao:Celal_2234 tRNA/rRNA methyltransferase (SpoU) YP_004580007.1 KEGG: rbi:RB2501_02235 hypothetical protein YP_004580008.1 PFAM: Protein of unknown function DUF805; KEGG: cte:CT1580 aminopeptidase C YP_004580009.1 PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: fjo:Fjoh_4899 tryptophan synthase subunit alpha YP_004580010.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: cly:Celly_0549 tryptophan synthase subunit beta YP_004580011.1 KEGG: cly:Celly_0548 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004580012.1 KEGG: cly:Celly_0547 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004580013.1 PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: fps:FP0511 anthranilate phosphoribosyltransferase YP_004580014.1 TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: fps:FP0512 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; PFAM: Glutamine amidotransferase class-I, C-terminal YP_004580015.1 KEGG: fbc:FB2170_16281 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal YP_004580016.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cat:CA2559_06420 thiol:disulfide interchange protein TlpA YP_004580017.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rbi:RB2501_02170 thiol-disulfide isomerase/thioredoxin YP_004580018.1 KEGG: cly:Celly_0541 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004580019.1 KEGG: cat:CA2559_11818 conserved hypothetical rhodanese-domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004580020.1 PFAM: Carboxylesterase, type B; KEGG: gfo:GFO_2628 carboxylesterase YP_004580021.1 PFAM: Alginate lyase 2; KEGG: cat:CA2559_11528 alginate lyase YP_004580022.1 KEGG: cao:Celal_0442 poly(beta-D-mannuronate) lyase YP_004580023.1 PFAM: Alginate lyase 2; KEGG: gfo:GFO_1145 secreted alginate lyase-like protein YP_004580024.1 PFAM: Heparinase II/III-like; KEGG: cao:Celal_4221 heparinase II/III family protein YP_004580025.1 PFAM: Cupin 2, conserved barrel; KEGG: cly:Celly_1777 cupin 2 barrel domain-containing protein YP_004580026.1 PFAM: TonB-dependent receptor, plug; KEGG: cly:Celly_0296 TonB-dependent receptor plug YP_004580027.1 PFAM: RagB/SusD; KEGG: gfo:GFO_1154 SusD/RagB family protein YP_004580028.1 KEGG: cly:Celly_0298 PKD domain-containing protein; PFAM: PKD; SMART: PKD YP_004580029.1 PFAM: Alginate lyase 2; KEGG: cat:CA2559_11483 hypothetical protein YP_004580030.1 KEGG: cat:CA2559_11478 transcriptional regulator, GntR family protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004580031.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cao:Celal_4213 major facilitator superfamily mfs_1 YP_004580032.1 KEGG: cly:Celly_0302 3-oxoacyl-ACP reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004580033.1 PFAM: Carbohydrate/purine kinase; KEGG: fjo:Fjoh_4261 ribokinase-like domain-containing protein YP_004580034.1 PFAM: KDPG/KHG aldolase; KEGG: gfo:GFO_1707 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase YP_004580035.1 SMART: HTH transcriptional regulator, LacI; KEGG: cat:CA2559_11448 LacI-family transcriptional regulator YP_004580036.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: cao:Celal_3482 hypothetical protein YP_004580037.1 KEGG: gfo:GFO_0929 hypothetical protein YP_004580038.1 KEGG: gfo:GFO_0930 hypothetical protein YP_004580039.1 KEGG: gfo:GFO_1388 integrase; manually curated; PFAM: Integrase, catalytic core YP_004580040.1 PFAM: Transposase IS3/IS911; KEGG: gfo:GFO_1387 transposase YP_004580044.1 KEGG: coc:Coch_0676 hypothetical protein YP_004580045.1 KEGG: cat:CA2559_11218 hypothetical protein YP_004580046.1 KEGG: cat:CA2559_00210 hypothetical saccharopine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal YP_004580047.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ana:all3753 hypothetical protein YP_004580048.1 PFAM: Thrombospondin, type 3-like repeat; KEGG: phe:Phep_3953 hypothetical protein YP_004580049.1 KEGG: mem:Memar_2282 hypothetical protein YP_004580051.1 PFAM: Protein of unknown function DUF1801; KEGG: cly:Celly_2266 hypothetical protein YP_004580052.1 KEGG: fjo:Fjoh_3514 hypothetical protein YP_004580053.1 TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; KEGG: fbc:FB2170_01916 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004580054.1 KEGG: zpr:ZPR_3619 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_004580055.1 KEGG: ran:Riean_1172 hypothetical protein YP_004580058.1 PFAM: Methyltransferase type 11; KEGG: aba:Acid345_3127 methyltransferase type 11 YP_004580059.1 PFAM: Methyltransferase type 12; KEGG: bra:BRADO0169 methyl transferase YP_004580060.1 KEGG: tjr:TherJR_0496 hypothetical protein YP_004580061.1 PFAM: Glycosyl transferase, family 2; KEGG: pgi:PG0334 glycosyl transferase, group 2 family protein YP_004580062.1 manually curated; KEGG: fps:FP1869 hypothetical protein YP_004580063.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fps:FP1870 aminotransferase YP_004580064.1 PFAM: Polysaccharide biosynthesis protein; KEGG: cat:CA2559_09393 lipopolysaccharide biosynthesis protein YP_004580065.1 KEGG: fps:FP1865 glycosyl transferase WbsE YP_004580066.1 PFAM: Glycosyl transferase, group 1; KEGG: fps:FP1864 glycosyl transferase, group 1 family protein YP_004580067.1 PFAM: WxcM-like, C-terminal; KEGG: fps:FP1863 hypothetical protein YP_004580068.1 PFAM: Glycosyl transferase, family 2; KEGG: fps:FP1861 glycosyl transferase, group 2 family protein YP_004580069.1 KEGG: pat:Patl_1101 hypothetical protein YP_004580070.1 KEGG: dal:Dalk_3719 hypothetical protein YP_004580071.1 PFAM: ABC transporter-like; KEGG: cat:CA2559_00170 ATP-binding protein involved in cell division; SMART: ATPase, AAA+ type, core YP_004580072.1 PFAM: Tetratricopeptide TPR-1; KEGG: cat:CA2559_00175 TPR-domain containing protein YP_004580073.1 KEGG: cao:Celal_0525 hypothetical protein YP_004580074.1 PFAM: Amidohydrolase 3; KEGG: cat:CA2559_09378 predicted metal-dependent amidohydrolase with the TIM-barrel fold YP_004580075.1 PFAM: Protein of unknown function DUF2059; KEGG: fbc:FB2170_02225 hypothetical protein YP_004580076.1 PFAM: Methyltransferase type 11; KEGG: cly:Celly_2198 methyltransferase type 11 YP_004580077.1 PFAM: Uncharacterised protein family UPF0153; KEGG: cly:Celly_2200 hypothetical protein YP_004580078.1 PFAM: Fatty acid hydroxylase; KEGG: cly:Celly_2201 fatty acid hydroxylase YP_004580079.1 KEGG: tva:TVAG_166480 hypothetical protein YP_004580080.1 PFAM: Uncharacterised conserved protein UCP016719; KEGG: zpr:ZPR_1141 hypothetical protein YP_004580081.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: gfo:GFO_2398 lipoprotein releasing system transmembrane protein YP_004580082.1 KEGG: cly:Celly_2204 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004580083.1 KEGG: cao:Celal_3651 hypothetical protein YP_004580084.1 KEGG: cao:Celal_2362 hypothetical protein YP_004580085.1 KEGG: fbc:FB2170_16256 hypothetical protein YP_004580086.1 PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; KEGG: cao:Celal_2364 TrkA-n domain protein YP_004580087.1 KEGG: cat:CA2559_00095 Na(+)-linked D-alanine glycine permease; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter YP_004580088.1 KEGG: cat:CA2559_00090 hypothetical protein YP_004580089.1 KEGG: cat:CA2559_00085 probable acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004580090.1 KEGG: mtt:Ftrac_2538 hypothetical protein YP_004580091.1 KEGG: gfo:GFO_2386 tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004580092.1 KEGG: fbc:FB2170_16221 sigma-54 modulation protein YP_004580093.1 KEGG: cat:CA2559_00060 translation elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal YP_004580094.1 KEGG: zpr:ZPR_1162 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein YP_004580095.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: zpr:ZPR_1163 transcription antitermination protein; SMART: Transcription antitermination protein, NusG, N-terminal; KOW YP_004580096.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: cat:CA2559_00045 50S ribosomal protein L11; SMART: Ribosomal protein L11 YP_004580097.1 KEGG: rbi:RB2501_02090 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1 YP_004580098.1 KEGG: gfo:GFO_2372 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10 YP_004580099.1 TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: zpr:ZPR_1167 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal YP_004580100.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: zpr:ZPR_1168 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7 YP_004580101.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: zpr:ZPR_1169 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5 YP_004580102.1 KEGG: cat:CA2559_00015 hypothetical protein YP_004580103.1 KEGG: cat:CA2559_00010 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding YP_004580104.1 KEGG: ter:Tery_3470 hemolysin-type calcium-binding region YP_004580105.1 manually curated; KEGG: ter:Tery_3470 hemolysin-type calcium-binding region YP_004580106.1 manually curated; KEGG: ter:Tery_3470 hemolysin-type calcium-binding region YP_004580107.1 KEGG: ter:Tery_3470 hemolysin-type calcium-binding region YP_004580108.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: fbc:FB2170_16121 hypothetical protein YP_004580109.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; KEGG: cat:CA2559_13643 OmpA family protein YP_004580110.1 PFAM: NUDIX hydrolase domain; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; HAMAP: Isopentenyl-diphosphate Delta-isomerase; KEGG: cat:CA2559_13638 isopentenyl-diphosphate delta-isomerase YP_004580111.1 PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: fps:FP1791 6-pyruvoyltetrahydrobiopterin synthase YP_004580112.1 KEGG: cly:Celly_0510 hypothetical protein YP_004580113.1 KEGG: gfo:GFO_2355 hypothetical protein YP_004580114.1 PFAM: Protein of unknown function DUF819; KEGG: cat:CA2559_07490 hypothetical protein YP_004580115.1 KEGG: cat:CA2559_07480 hypothetical protein YP_004580116.1 KEGG: cao:Celal_2402 DNA-N1-methyladenine dioxygenase YP_004580117.1 KEGG: gfo:GFO_2346 hypothetical protein YP_004580118.1 KEGG: das:Daes_2690 D-Ala-D-Ala dipeptidase; PFAM: Peptidase M15D, vanX D-ala-D-ala dipeptidase YP_004580119.1 PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: fjo:Fjoh_2224 tRNA/rRNA methyltransferase (SpoU) YP_004580120.1 PFAM: Fibronectin, type III; KEGG: cat:CA2559_00775 iron-regulated protein FrpC YP_004580121.1 KEGG: cly:Celly_0274 hypothetical protein YP_004580122.1 KEGG: gfo:GFO_0781 hypothetical protein YP_004580124.1 PFAM: Amidohydrolase 1; KEGG: cly:Celly_0273 amidohydrolase 3 YP_004580125.1 PFAM: Amidohydrolase 1; KEGG: cat:CA2559_12678 secreted enzyme YP_004580126.1 KEGG: zpr:ZPR_1682 amino acid permease YP_004580127.1 TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; KEGG: fjo:Fjoh_2400 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20 YP_004580128.1 PFAM: WD40-like Beta Propeller; KEGG: cly:Celly_1776 hypothetical protein YP_004580129.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: cly:Celly_0268 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004580130.1 KEGG: zpr:ZPR_1687 gliding motility protein GldI; TIGRFAM: Gliding motility-associated, peptidyl-prolyl isomerase, GldI; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type YP_004580131.1 PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: cao:Celal_2756 phosphoesterase RecJ domain protein YP_004580132.1 SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: zpr:ZPR_1690 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core YP_004580133.1 KEGG: afw:Anae109_3035 protease domain-containing protein; PFAM: Peptidase M4, thermolysin C-terminal; Propeptide, peptidase M4/M36 YP_004580134.1 KEGG: zpr:ZPR_2654 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004580135.1 KEGG: cao:Celal_3913 cold-shock DNA-binding protein family; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004580136.1 PFAM: Protein of unknown function DUF721; KEGG: fbc:FB2170_09551 hypothetical protein YP_004580137.1 KEGG: cao:Celal_2762 hypothetical protein YP_004580138.1 TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: cao:Celal_2763 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal YP_004580139.1 KEGG: cat:CA2559_09778 hypothetical protein YP_004580140.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: fjo:Fjoh_0212 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_004580142.1 KEGG: cat:CA2559_07065 hypothetical protein YP_004580143.1 TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: zpr:ZPR_1458 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like YP_004580144.1 PFAM: Peptidase S54, rhomboid; KEGG: cao:Celal_2768 peptidase S54, rhomboid domain protein YP_004580145.1 PFAM: Peptidase S54, rhomboid; KEGG: fbc:FB2170_09591 transmembrane rhomboid family protein YP_004580146.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cat:CA2559_07085 hypothetical protein YP_004580147.1 KEGG: fbc:FB2170_09601 hypothetical protein YP_004580148.1 PFAM: WbqC-like protein family; KEGG: gfo:GFO_0801 hypothetical protein YP_004580149.1 KEGG: cly:Celly_0251 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004580150.1 TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; KEGG: fps:FP1128 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase YP_004580151.1 KEGG: cat:CA2559_07105 hypothetical protein YP_004580152.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: zpr:ZPR_1466 ParB-like chromosome partition protein; SMART: ParB-like nuclease YP_004580153.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fjo:Fjoh_0202 cobyrinic acid a,c-diamide synthase YP_004580154.1 PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; KEGG: gfo:GFO_0807 zinc protease PqqL YP_004580155.1 PFAM: Spore coat protein CotH; KEGG: bth:BT_3500 hypothetical protein YP_004580156.1 PFAM: Metallophosphoesterase; KEGG: lby:Lbys_0126 metallophosphoesterase YP_004580157.1 KEGG: cat:CA2559_06915 hypothetical protein YP_004580158.1 TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: cat:CA2559_07125 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding YP_004580159.1 KEGG: cat:CA2559_07135 hypothetical protein YP_004580160.1 KEGG: cly:Celly_0245 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic YP_004580161.1 KEGG: cat:CA2559_07145 uridine kinase; manually curated; PFAM: Septum formation initiator YP_004580162.1 TIGRFAM: Uridine kinase; KEGG: fps:FP1119 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase YP_004580163.1 PFAM: Cytochrome c, class I; KEGG: cat:CA2559_12333 probable major anaerobically induced outer membrane transmembrane protein YP_004580164.1 KEGG: fbc:FB2170_09801 hypothetical protein YP_004580166.1 KEGG: cly:Celly_1583 succinate-semialdehyde dehydrogenase (NAD(P)(+)); PFAM: Aldehyde dehydrogenase YP_004580167.1 KEGG: cly:Celly_2214 hypothetical protein YP_004580168.1 KEGG: cao:Celal_1825 hypothetical protein YP_004580169.1 KEGG: cao:Celal_1824 glutaminyl-tRNA synthetase YP_004580170.1 PFAM: Haemerythrin/HHE cation-binding motif; KEGG: rbi:RB2501_08495 hypothetical protein YP_004580171.1 KEGG: fjo:Fjoh_3368 topoisomerase IB-like protein YP_004580172.1 KEGG: cly:Celly_2477 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Protein of unknown function DUF2383 YP_004580173.1 KEGG: rbi:RB2501_08505 transcriptional regulatory protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580174.1 KEGG: gfo:GFO_1678 AraC family transcription regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580175.1 PFAM: Arsenate reductase-like; KEGG: cly:Celly_1585 hypothetical protein YP_004580176.1 TIGRFAM: Thioredoxin reductase; KEGG: fps:FP0615 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004580177.1 KEGG: cat:CA2559_09548 hypothetical protein YP_004580178.1 PFAM: PspC; KEGG: gfo:GFO_0991 PspC domain-containing protein YP_004580179.1 PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: zpr:ZPR_2403 PadR-like family transcriptional regulator protein YP_004580180.1 KEGG: fbc:FB2170_14368 hypothetical protein YP_004580181.1 KEGG: fjo:Fjoh_0193 hypothetical protein YP_004580182.1 KEGG: cat:CA2559_08951 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124 YP_004580183.1 KEGG: cat:CA2559_08956 hypothetical protein YP_004580184.1 KEGG: cat:CA2559_06655 hypothetical protein YP_004580185.1 KEGG: cat:CA2559_06660 hypothetical protein YP_004580186.1 KEGG: cat:CA2559_06665 probable cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004580187.1 KEGG: cat:CA2559_06670 hypothetical protein YP_004580188.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cat:CA2559_08961 transcriptional regulator, LysR family protein YP_004580189.1 PFAM: Ferritin/Dps protein; KEGG: fbc:FB2170_14303 DNA-binding DPS protein YP_004580190.1 PFAM: Protein of unknown function DUF2141; KEGG: cao:Celal_2722 hypothetical protein YP_004580191.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; KEGG: cly:Celly_1243 OmpA/MotB domain-containing protein YP_004580192.1 PFAM: Protein of unknown function DUF58; KEGG: cao:Celal_2847 hypothetical protein YP_004580193.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: cly:Celly_0211 ATPase YP_004580194.1 KEGG: fbc:FB2170_15543 hypothetical protein YP_004580195.1 KEGG: fbc:FB2170_15538 hypothetical protein YP_004580196.1 KEGG: cly:Celly_0208 hypothetical protein YP_004580197.1 PFAM: Protein of unknown function DUF95, transmembrane; KEGG: fbc:FB2170_15528 hypothetical protein YP_004580198.1 PFAM: RDD; KEGG: fbc:FB2170_15523 transmembrane protein YP_004580199.1 PFAM: Uncharacterised protein family UPF0126; KEGG: fbc:FB2170_15518 hypothetical protein YP_004580200.1 KEGG: fbc:FB2170_01060 t-RNA-binding region; TIGRFAM: Secretion chaperone CsaA; PFAM: tRNA-binding region YP_004580201.1 SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; KEGG: cly:Celly_0131 PUR-alpha/beta/gamma DNA/RNA-binding protein YP_004580202.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: gfo:GFO_2529 ABC-type multidrug/protein/lipid transporter ATP-binding and permease component; SMART: ATPase, AAA+ type, core YP_004580203.1 KEGG: cat:CA2559_12928 leucine dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YP_004580204.1 KEGG: gfo:GFO_2527 antitermination protein NusB; TIGRFAM: NusB antitermination factor; PFAM: NusB/RsmB/TIM44 YP_004580205.1 PFAM: Protein of unknown function DUF1573; KEGG: cat:CA2559_12918 hypothetical protein YP_004580206.1 KEGG: fbc:FB2170_01020 YajC; TIGRFAM: YajC; PFAM: YajC YP_004580207.1 PFAM: Protein of unknown function DUF1801; KEGG: zpr:ZPR_0859 hypothetical protein YP_004580208.1 PFAM: Uncharacterised conserved protein UCP033199; KEGG: pbs:Plabr_0939 uncharacterized conserved protein UCP033199 YP_004580209.1 KEGG: amc:MADE_00465 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F YP_004580210.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: cly:Celly_0204 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004580211.1 PFAM: NUDIX hydrolase domain; KEGG: cat:CA2559_09303 hypothetical protein YP_004580212.1 KEGG: cat:CA2559_09308 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004580213.1 KEGG: cat:CA2559_01880 hypothetical protein YP_004580214.1 KEGG: fjo:Fjoh_2395 hypothetical protein YP_004580215.1 KEGG: cao:Celal_2859 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004580216.1 PFAM: TonB-dependent receptor, plug; KEGG: cly:Celly_2753 TonB-dependent receptor plug YP_004580217.1 KEGG: sno:Snov_0493 hypothetical protein YP_004580218.1 KEGG: sno:Snov_0494 hypothetical protein YP_004580221.1 PFAM: Protein of unknown function DUF2141; KEGG: fjo:Fjoh_4915 hypothetical protein YP_004580222.1 KEGG: fbc:FB2170_14143 hypothetical protein YP_004580223.1 PFAM: Signal transduction histidine kinase, internal region; KEGG: cly:Celly_2515 signal transduction histidine kinase LytS YP_004580224.1 KEGG: gfo:GFO_1016 hypothetical protein YP_004580225.1 KEGG: cao:Celal_0196 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004580226.1 PFAM: LETM1-like; KEGG: fbc:FB2170_14113 hypothetical protein YP_004580227.1 KEGG: cat:CA2559_12228 hypothetical protein YP_004580228.1 KEGG: cat:CA2559_12223 hypothetical protein YP_004580229.1 KEGG: cao:Celal_0192 tetratricopeptide tpr_1 repeat-containing protein YP_004580230.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cao:Celal_0191 TonB-dependent receptor YP_004580231.1 PFAM: Anti-sigma K factor RskA; KEGG: cly:Celly_2525 hypothetical protein YP_004580232.1 KEGG: cly:Celly_2526 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4 YP_004580233.1 PFAM: Superoxide dismutase, copper/zinc binding; KEGG: cat:CA2559_12203 copper/zinc superoxide dismutase YP_004580234.1 KEGG: cly:Celly_2529 hypothetical protein YP_004580235.1 KEGG: cly:Celly_2531 hypothetical protein YP_004580236.1 KEGG: cly:Celly_2532 magnesium chelatase subunit Chll YP_004580237.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: fbc:FB2170_14103 OsmC-like protein YP_004580238.1 KEGG: cly:Celly_2533 hypothetical protein YP_004580239.1 PFAM: Peptidase M28; KEGG: cly:Celly_2538 peptidase M28 YP_004580240.1 PFAM: Protein of unknown function DUF421; KEGG: gfo:GFO_1918 hypothetical protein YP_004580241.1 KEGG: cly:Celly_2543 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region YP_004580242.1 KEGG: cly:Celly_2544 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004580243.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: cly:Celly_2545 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004580244.1 KEGG: fps:FP1722 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004580245.1 KEGG: fjo:Fjoh_4728 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004580246.1 KEGG: fjo:Fjoh_0497 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580247.1 KEGG: fbc:FB2170_13928 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein YP_004580248.1 KEGG: fjo:Fjoh_4723 endonuclease I; PFAM: Endonuclease I; Fibronectin, type III; SMART: Fibronectin, type III YP_004580249.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: fbc:FB2170_13918 sun protein YP_004580250.1 KEGG: mtt:Ftrac_1243 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004580253.1 PFAM: EF-Hand domain; KEGG: cao:Celal_4099 hypothetical protein YP_004580254.1 SMART: Calcium-binding EF-hand; KEGG: cpi:Cpin_5798 calcium-binding protein YP_004580255.1 KEGG: amr:AM1_1057 hypothetical protein YP_004580256.1 KEGG: cao:Celal_4098 hypothetical protein YP_004580257.1 KEGG: cao:Celal_4097 MORN variant repeat-containing protein YP_004580258.1 PFAM: Copper chaperone SCO1/SenC; KEGG: cao:Celal_4096 electron transport protein sco1/SenC YP_004580259.1 KEGG: gfo:GFO_1053 BNR repeat-containing glycosyl hydrolase YP_004580260.1 KEGG: fbc:FB2170_13898 hypothetical protein YP_004580261.1 KEGG: fbc:FB2170_13893 hypothetical protein YP_004580262.1 KEGG: gfo:GFO_1056 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004580263.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: cao:Celal_0093 xenobiotic-transporting atpase; SMART: ATPase, AAA+ type, core YP_004580264.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; KEGG: fjo:Fjoh_0112 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_004580265.1 PFAM: Glycosyl transferase, family 2; KEGG: cly:Celly_2562 family 2 glycosyl transferase YP_004580266.1 KEGG: cat:CA2559_11233 hypothetical protein YP_004580267.1 KEGG: cat:CA2559_11228 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31 YP_004580268.1 KEGG: cao:Celal_0087 hypothetical protein YP_004580269.1 PFAM: YhhN-like; KEGG: fbc:FB2170_10414 hypothetical protein YP_004580270.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: cat:CA2559_09061 oligopeptide/dipeptide ABC transporter, peptide-binding protein YP_004580271.1 TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; KEGG: zpr:ZPR_2038 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB YP_004580272.1 KEGG: fbc:FB2170_13848 hypothetical protein YP_004580273.1 KEGG: cly:Celly_0169 hypothetical protein YP_004580274.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: cat:CA2559_12858 membrane-bound lytic murein transglycosylase YP_004580275.1 KEGG: rbi:RB2501_00296 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase YP_004580276.1 PFAM: Protein of unknown function DUF81; KEGG: fba:FIC_00076 hypothetical protein YP_004580277.1 KEGG: gfo:GFO_1072 membrane protein YP_004580278.1 TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: cly:Celly_0165 50S ribosomal protein L34; PFAM: Ribosomal protein L34 YP_004580279.1 TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: cat:CA2559_12823 carbamoyl-phosphate synthase, large (or ammonia) subunit (CarB); PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation YP_004580280.1 PFAM: Blue (type 1) copper domain; KEGG: cat:CA2559_12818 hypothetical protein YP_004580281.1 PFAM: Thioesterase superfamily; KEGG: zpr:ZPR_2053 acyl-CoA thioester hydrolase YP_004580282.1 KEGG: cao:Celal_0070 6-phosphogluconate dehydrogenase YP_004580283.1 PFAM: RmuC; KEGG: cao:Celal_0069 RmuC-domain protein YP_004580284.1 PFAM: ABC transporter-like; KEGG: gfo:GFO_1082 ABC-type transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004580285.1 PFAM: Bacterial transport system permease; KEGG: cly:Celly_0155 ABC-type transporter, integral membrane subunit YP_004580286.1 KEGG: cao:Celal_0065 periplasmic binding protein YP_004580287.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: fps:FP1457 TonB-dependent outer membrane receptorprecursor YP_004580288.1 KEGG: fjo:Fjoh_0092 hypothetical protein YP_004580289.1 KEGG: cly:Celly_0195 ATP-binding protein; TIGRFAM: Protein of unknown function DUF71, ATP-binding region; PFAM: Protein of unknown function DUF71, ATP-binding region YP_004580290.1 KEGG: zpr:ZPR_2063 peptidase family S41; PFAM: Peptidase S41; SMART: Peptidase S41 YP_004580291.1 KEGG: cao:Celal_0059 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004580292.1 KEGG: fbc:FB2170_13768 hypothetical protein YP_004580293.1 KEGG: cly:Celly_0149 hypothetical protein YP_004580294.1 KEGG: fjo:Fjoh_0097 hypothetical protein YP_004580296.1 TIGRFAM: Adenylosuccinate lyase; KEGG: cao:Celal_0053 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase YP_004580297.1 KEGG: cao:Celal_0052 adenylosuccinate lyase YP_004580298.1 KEGG: cly:Celly_0143 hypothetical protein YP_004580299.1 PFAM: Glycosyl transferase, group 1; KEGG: psn:Pedsa_0914 glycosyl transferase group 1 YP_004580300.1 KEGG: mtt:Ftrac_3272 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal YP_004580301.1 KEGG: cly:Celly_0554 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004580302.1 KEGG: zpr:ZPR_1344 hypothetical protein YP_004580303.1 KEGG: cao:Celal_0051 nad-dependent deacetylase; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2 YP_004580304.1 KEGG: zpr:ZPR_2882 hypothetical protein YP_004580305.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cat:CA2559_11883 SpoU protein (SpoU) YP_004580306.1 PFAM: Polyketide cyclase/dehydrase; KEGG: fbc:FB2170_13713 hypothetical protein YP_004580307.1 KEGG: cat:CA2559_08806 hypothetical protein YP_004580308.1 KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580309.1 KEGG: fba:FIC_01835 ATPase YP_004580313.1 KEGG: cly:Celly_1706 hypothetical protein YP_004580314.1 PFAM: Fatty acid hydroxylase; KEGG: cly:Celly_2906 fatty acid hydroxylase YP_004580315.1 KEGG: pyo:PY02104 rhoptry protein YP_004580317.1 KEGG: bbe:BBR47_17730 hypothetical protein YP_004580318.1 KEGG: cao:Celal_3067 hypothetical protein YP_004580319.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: fps:FP1819 deoxyribonucleoside-triphosphatase YP_004580320.1 KEGG: rbi:RB2501_02990 hypothetical protein YP_004580321.1 KEGG: cly:Celly_0317 ribosomal RNA large subunit methyltransferase H; HAMAP: Ribosomal RNA large subunit methyltransferase H; PFAM: SPOUT methyltransferase, predicted YP_004580322.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: fbc:FB2170_13633 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004580323.1 PFAM: Ribonuclease BN-related; KEGG: fbc:FB2170_13628 ribonuclease BN YP_004580324.1 PFAM: Protein of unknown function DUF2147; KEGG: cat:CA2559_09958 hypothetical protein YP_004580325.1 TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: cao:Celal_0034 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580327.1 KEGG: fps:FP1852 two-component system response regulatory protein; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004580328.1 TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: cao:Celal_0032 ssu ribosomal protein s6p; PFAM: Ribosomal protein S6, bacterial-like YP_004580329.1 TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: fjo:Fjoh_3481 30S ribosomal protein S18; PFAM: Ribosomal protein S18 YP_004580330.1 TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: cly:Celly_0309 50S ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal YP_004580331.1 PFAM: TonB-dependent receptor, plug; KEGG: cao:Celal_0029 TonB-dependent receptor plug YP_004580332.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: cly:Celly_1462 glycerophosphoryl diester phosphodiesterase YP_004580333.1 KEGG: cao:Celal_0028 hypothetical protein YP_004580334.1 PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: zpr:ZPR_2125 histidyl-tRNA synthetase YP_004580335.1 KEGG: zpr:ZPR_0942 hyalin domain-containing protein YP_004580336.1 KEGG: gfo:GFO_0393 hyalin domain-containing protein; PFAM: MAM; Laminin G, subdomain 2; SMART: LamG-like jellyroll fold; MAM YP_004580337.1 KEGG: gfo:GFO_0393 hyalin domain-containing protein; PFAM: Laminin G, subdomain 2; SMART: LamG-like jellyroll fold YP_004580338.1 KEGG: cat:CA2559_03565 thermolysin; PFAM: Peptidase M14, carboxypeptidase A; Fibronectin, type III; MAM; Hyalin; SMART: Peptidase M14, carboxypeptidase A; Fibronectin, type III; MAM YP_004580339.1 KEGG: fps:FP2240 hypothetical protein YP_004580340.1 PFAM: Monooxygenase, FAD-binding; KEGG: cat:CA2559_03920 monooxygenase, FAD-binding:FAD dependent oxidoreductase:tryptophan halogenase YP_004580341.1 KEGG: cat:CA2559_03915 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase YP_004580342.1 PFAM: KWG Leptospira; KEGG: fps:FP2286 hypothetical protein YP_004580343.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: fps:FP2285 3-oxoacyl-ACP reductase YP_004580344.1 KEGG: fps:FP2284 3-oxoacyl-ACP synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal YP_004580345.1 HAMAP: Acyl carrier protein (ACP); KEGG: cat:CA2559_03900 acyl carrier protein YP_004580346.1 KEGG: fjo:Fjoh_1104 lipid A biosynthesis acyltransferase YP_004580347.1 KEGG: fps:FP2280 dialkylrecorsinol condensing enzyme DarA YP_004580348.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: fps:FP2279 3-oxoacyl-(acyl carrier protein) synthase III YP_004580349.1 KEGG: fjo:Fjoh_1101 hypothetical protein YP_004580350.1 PFAM: Beta-hydroxyacyl-ACP dehydratase, FabA/FabZ; KEGG: fps:FP2277 flexirubin-type pigment biosynthesis acyl carrier protein DarC1 YP_004580351.1 KEGG: fjo:Fjoh_1098 hypothetical protein YP_004580352.1 KEGG: fps:FP2275 hypothetical protein YP_004580353.1 PFAM: ABC transporter-like; KEGG: fps:FP2272 ABC transporter ATPase; SMART: ATPase, AAA+ type, core YP_004580354.1 PFAM: ABC-2 type transporter; KEGG: fps:FP2271 ABC transporter permease YP_004580355.1 KEGG: cat:CA2559_03885 hypothetical protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily YP_004580356.1 KEGG: cat:CA2559_03880 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal YP_004580357.1 KEGG: fps:FP2268 hypothetical protein YP_004580358.1 KEGG: fjo:Fjoh_1089 hypothetical protein YP_004580359.1 KEGG: fjo:Fjoh_1088 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal YP_004580360.1 KEGG: cat:CA2559_03860 beta-ketoacyl synthase YP_004580361.1 PFAM: Polysaccharide deacetylase; KEGG: cat:CA2559_03855 polysaccharide deacetylase YP_004580362.1 PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: cat:CA2559_03850 hypothetical protein YP_004580363.1 KEGG: cat:CA2559_03845 hypothetical protein YP_004580364.1 KEGG: fjo:Fjoh_1083 hypothetical protein YP_004580365.1 PFAM: Beta-hydroxyacyl-ACP dehydratase, FabA/FabZ; KEGG: fps:FP2259 dehydratase YP_004580366.1 KEGG: fps:FP2258 hypothetical protein YP_004580367.1 PFAM: Glycosyl transferase, family 2; Protein of unknown function DUF2062; KEGG: cat:CA2559_03835 dolichyl-phosphate mannose synthase-like protein YP_004580368.1 KEGG: cat:CA2559_03830 hypothetical membrane protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004580369.1 KEGG: fps:FP2255 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_004580370.1 KEGG: cat:CA2559_03820 JmjC domain protein YP_004580371.1 PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Tetratricopeptide TPR-3; KEGG: cat:CA2559_03815 hypothetical protein YP_004580372.1 KEGG: cat:CA2559_03810 coenzyme F390 synthetase-like protein YP_004580373.1 KEGG: fjo:Fjoh_1615 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004580374.1 KEGG: fjo:Fjoh_4845 signal transduction histidine kinase; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; ATP-binding region, ATPase-like; SMART: Tetratricopeptide repeat YP_004580375.1 PFAM: Signal transduction response regulator, receiver region; KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein YP_004580377.1 KEGG: cly:Celly_2235 hypothetical protein YP_004580378.1 KEGG: zpr:ZPR_1416 hypothetical protein YP_004580379.1 KEGG: zpr:ZPR_1418 hypothetical protein YP_004580380.1 KEGG: ptm:GSPATT00039023001 hypothetical protein YP_004580383.1 PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: pct:PC1_4181 protein involved in beta-1 3-glucan synthesis-like protein YP_004580384.1 KEGG: chu:CHU_2394 hypothetical protein YP_004580385.1 KEGG: pfl:PFL_2457 hypothetical protein YP_004580386.1 KEGG: amr:AM1_2774 hypothetical protein YP_004580387.1 KEGG: cly:Celly_3074 hypothetical protein YP_004580388.1 KEGG: cly:Celly_2099 deoxyinosine 3'endonuclease (endonuclease V)-like protein YP_004580389.1 KEGG: cao:Celal_3172 hypothetical protein YP_004580390.1 KEGG: cly:Celly_3083 hypothetical protein YP_004580391.1 KEGG: cao:Celal_3176 hypothetical protein YP_004580392.1 KEGG: zpr:ZPR_1410 hypothetical protein YP_004580393.1 KEGG: cao:Celal_3179 hypothetical protein YP_004580395.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; DNA/RNA helicase, C-terminal; KEGG: gtn:GTNG_0761 type I restriction enzyme EcoKI subunit R; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580396.1 PFAM: Protein of unknown function DUF262; KEGG: pvi:Cvib_0085 hypothetical protein YP_004580397.1 PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; KEGG: ppr:PBPRA1799 hypothetical protein YP_004580398.1 KEGG: ccb:Clocel_1116 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase, adenine-specific YP_004580399.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mma:MM_2703 type I restriction-modification system specificity subunit YP_004580400.1 KEGG: fps:FP1557 hypothetical protein YP_004580401.1 KEGG: fps:FP1556 hypothetical protein YP_004580402.1 KEGG: lic:LIC12053 hypothetical protein YP_004580403.1 KEGG: sli:Slin_6678 hypothetical protein YP_004580404.1 KEGG: dda:Dd703_0007 hypothetical protein YP_004580405.1 KEGG: sli:Slin_6676 HNH endonuclease YP_004580407.1 PFAM: KAP P-loop; KEGG: sne:SPN23F_12510 NTPase YP_004580410.1 KEGG: mev:Metev_0458 hypothetical protein YP_004580412.1 KEGG: ran:Riean_1541 hypothetical protein YP_004580413.1 KEGG: fjo:Fjoh_0579 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004580414.1 KEGG: ppn:Palpr_2694 signal transduction histidine kinase, LytS YP_004580415.1 KEGG: dba:Dbac_1313 hypothetical protein YP_004580416.1 PFAM: Radical SAM; KEGG: tcu:Tcur_2016 radical SAM domain-containing protein YP_004580418.1 KEGG: alv:Alvin_2303 5 nucleotidase deoxy cytosolic type C YP_004580420.1 KEGG: zpr:ZPR_2521 hypothetical protein YP_004580421.1 PFAM: Aminotransferase, class IV; KEGG: cly:Celly_3182 aminotransferase class IV YP_004580422.1 PFAM: Protein of unknown function DUF179; KEGG: cat:CA2559_09628 transcriptional regulator YP_004580423.1 KEGG: gfo:GFO_1443 histone-like DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_004580424.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: fbc:FB2170_10384 methionyl-tRNA formyltransferase YP_004580425.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: cat:CA2559_09613 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580426.1 KEGG: fjo:Fjoh_0136 ATPase-like protein YP_004580427.1 KEGG: zpr:ZPR_2528 hypothetical protein YP_004580428.1 KEGG: cly:Celly_3175 hypothetical protein YP_004580429.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: cly:Celly_3174 UDP-N-acetylglucosamine1-carboxyvinyltransferase YP_004580430.1 KEGG: cat:CA2559_02545 hypothetical protein YP_004580431.1 KEGG: zpr:ZPR_2313 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal YP_004580432.1 KEGG: cly:Celly_3172 hypothetical protein YP_004580433.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cly:Celly_3168 short-chain dehydrogenase/reductase SDR YP_004580434.1 TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: cly:Celly_3165 hypothetical protein YP_004580435.1 KEGG: cao:Celal_0590 arginyl-tRNA synthetase YP_004580436.1 PFAM: Deoxyribodipyrimidine photolyase-related protein; KEGG: zpr:ZPR_3763 deoxyribodipyrimidine photolyase YP_004580437.1 KEGG: gfo:GFO_2715 cryptochrome-like DNA photolyase; TIGRFAM: Cryptochrome, DASH; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal YP_004580438.1 KEGG: zpr:ZPR_3761 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205 YP_004580439.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cly:Celly_3164 NAD-dependent epimerase/dehydratase YP_004580440.1 KEGG: cly:Celly_3163 flavin reductase domain-containing protein FMN-binding protein YP_004580441.1 PFAM: ABC-1; KEGG: cly:Celly_3162 ABC-1 domain-containing protein YP_004580442.1 KEGG: cly:Celly_3161 hypothetical protein YP_004580443.1 KEGG: cly:Celly_3159 hypothetical protein YP_004580444.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cly:Celly_1008 glyoxalase/bleomycin resistance protein/dioxygenase YP_004580445.1 PFAM: Protein of unknown function DUF1697; KEGG: btl:BALH_2466 hypothetical protein YP_004580446.1 KEGG: gfo:GFO_1817 Na+/solute symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter YP_004580448.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: fbc:FB2170_10489 hypothetical protein YP_004580449.1 KEGG: gfo:GFO_1745 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like YP_004580450.1 PFAM: Mechanosensitive ion channel MscS; KEGG: zpr:ZPR_2321 small-conductance mechanosensitive ion channel protein YP_004580451.1 KEGG: fbc:FB2170_10499 Maf-like protein YP_004580452.1 KEGG: fjo:Fjoh_2955 Maf-like protein; HAMAP: Maf-like protein; PFAM: Maf-like protein YP_004580453.1 PFAM: UbiA prenyltransferase; KEGG: cat:CA2559_12008 Maf-like protein YP_004580454.1 TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KEGG: cao:Celal_3370 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family YP_004580455.1 PFAM: Domain of unknown function DUF2520; KEGG: cly:Celly_3150 hypothetical protein YP_004580456.1 KEGG: cao:Celal_1939 sec-independent protein translocase TatC YP_004580457.1 PFAM: Cytochrome c assembly protein; KEGG: zpr:ZPR_2327 cytochrome c assembly protein family hypothetical protein YP_004580458.1 KEGG: zpr:ZPR_2723 large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel YP_004580459.1 KEGG: cly:Celly_1310 hypothetical protein YP_004580460.1 PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: cly:Celly_3145 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004580461.1 KEGG: fba:FIC_01717 SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted YP_004580462.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: cly:Celly_3144 LmbE family protein YP_004580463.1 PFAM: Peptidase M28; KEGG: cly:Celly_3141 peptidase M28 YP_004580464.1 PFAM: Peptidase M28; KEGG: cat:CA2559_08756 aminopeptidase YP_004580466.1 KEGG: fps:FP0227 hypothetical protein YP_004580467.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: cly:Celly_3192 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal YP_004580468.1 PFAM: Thioesterase superfamily; KEGG: cat:CA2559_06210 hypothetical protein YP_004580469.1 PFAM: Nitroreductase-like; KEGG: cat:CA2559_06275 hypothetical protein YP_004580470.1 KEGG: cao:Celal_3435 protein disulfide isomerase YP_004580471.1 KEGG: cly:Celly_3038 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004580472.1 TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: cat:CA2559_06265 riboflavin biosynthesis protein; PFAM: DHBP synthase RibB; GTP cyclohydrolase II YP_004580473.1 KEGG: cat:CA2559_06260 hypothetical protein; manually curated; PFAM: Permease YjgP/YjgQ, predicted YP_004580474.1 PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: cat:CA2559_06255 hypothetical protein YP_004580475.1 PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cao:Celal_3623 cell division protein FtsK/SpoIIIE YP_004580476.1 PFAM: Diacylglycerol kinase, prokaryotic; KEGG: cly:Celly_3033 diacylglycerol kinase YP_004580477.1 KEGG: fps:FP1594 thiol peroxidase; HAMAP: thiol peroxidase; PFAM: Redoxin YP_004580478.1 KEGG: fjo:Fjoh_2765 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain YP_004580479.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: cao:Celal_1173 catalase-peroxidase YP_004580480.1 KEGG: cat:CA2559_07000 ankyrin-like protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat YP_004580481.1 PFAM: Alginate lyase 2; KEGG: cao:Celal_3580 alginate lyase 2 YP_004580482.1 PFAM: Aldehyde dehydrogenase; KEGG: cly:Celly_1449 aldehyde dehydrogenase YP_004580483.1 KEGG: cly:Celly_1450 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580484.1 PFAM: HTH transcriptional regulator, LysR; KEGG: cpi:Cpin_6757 LysR family transcriptional regulator YP_004580485.1 PFAM: Flavodoxin-like fold; KEGG: cpi:Cpin_6756 NAD(P)H dehydrogenase (quinone) YP_004580486.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cat:CA2559_09348 probable hydrolytic enzyme YP_004580487.1 KEGG: maq:Maqu_4123 hypothetical protein YP_004580488.1 KEGG: fjo:Fjoh_1988 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat YP_004580489.1 KEGG: cly:Celly_2029 LuxR family two component transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004580490.1 KEGG: cao:Celal_2198 hypothetical protein YP_004580491.1 KEGG: cao:Celal_2197 hypothetical protein YP_004580492.1 KEGG: cly:Celly_1429 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004580493.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cao:Celal_3351 transcriptional regulator, TetR family YP_004580494.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cao:Celal_2569 transcriptional regulator, LysR family YP_004580495.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cao:Celal_2568 lysine exporter protein (LysE/YggA) YP_004580496.1 KEGG: cly:Celly_3029 hypothetical protein YP_004580497.1 PFAM: Thioredoxin domain; KEGG: zpr:ZPR_2855 thioredoxin YP_004580498.1 KEGG: cly:Celly_3027 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal YP_004580499.1 KEGG: cat:CA2559_12548 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like YP_004580500.1 PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: cat:CA2559_12553 Cys/Met metabolism lyase (PLP-dependent) YP_004580501.1 KEGG: fps:FP1734 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004580502.1 PFAM: Abortive infection protein; KEGG: cat:CA2559_09056 hypothetical protein YP_004580503.1 KEGG: bth:BT_1888 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_004580504.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: cly:Celly_3023 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004580505.1 PFAM: Methyltransferase type 12; KEGG: sus:Acid_4352 glycosyl transferase YP_004580506.1 KEGG: cao:Celal_3651 hypothetical protein YP_004580507.1 KEGG: cly:Celly_2813 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580508.1 PFAM: Aldose 1-epimerase; KEGG: zpr:ZPR_2843 aldose 1-epimerase YP_004580509.1 PFAM: GumN; KEGG: cpi:Cpin_2126 GumN family protein YP_004580510.1 KEGG: cly:Celly_3018 anthranilate synthase; PFAM: Chorismate binding, C-terminal YP_004580511.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: gfo:GFO_2153 PP-loop family protein; PFAM: PP-loop YP_004580512.1 KEGG: cat:CA2559_09878 exported cytochrome c biogenesis-related protein; PFAM: Cytochrome c assembly protein, transmembrane region YP_004580513.1 PFAM: Amidohydrolase 1; TIGRFAM: Adenine deaminase; HAMAP: Adenine deaminase; KEGG: fps:FP1059 adenine deaminase YP_004580514.1 KEGG: fjo:Fjoh_3281 ATPase; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core YP_004580515.1 KEGG: fjo:Fjoh_3267 hypothetical protein YP_004580516.1 KEGG: fjo:Fjoh_3266 hypothetical protein YP_004580517.1 KEGG: cao:Celal_0681 hypothetical protein YP_004580518.1 manually curated; KEGG: cao:Celal_0682 hypothetical protein YP_004580522.1 KEGG: mci:Mesci_6373 cell wall assembly/cell proliferation coordinating protein, knr4-like protein YP_004580524.1 KEGG: fjo:Fjoh_0899 hypothetical protein YP_004580525.1 TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 rhs protein YP_004580528.1 KEGG: bfr:BF2846 hypothetical protein YP_004580529.1 KEGG: cpi:Cpin_6416 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein YP_004580530.1 KEGG: fjo:Fjoh_3261 hypothetical protein YP_004580531.1 KEGG: cao:Celal_3749 hypothetical protein YP_004580532.1 KEGG: cao:Celal_3745 hypothetical protein YP_004580535.1 KEGG: pbe:PB000514.00.0 hypothetical protein YP_004580536.1 PFAM: Peptidase M23; KEGG: abb:ABBFA_000117 LysM domain protein YP_004580537.1 KEGG: cly:Celly_0982 hypothetical protein YP_004580538.1 KEGG: esa:ESA_02034 hypothetical protein YP_004580539.1 KEGG: chu:CHU_0711 hypothetical protein YP_004580541.1 KEGG: cao:Celal_3988 rhs element vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein YP_004580542.1 KEGG: cao:Celal_3749 hypothetical protein YP_004580543.1 KEGG: fjo:Fjoh_3278 hypothetical protein YP_004580544.1 PFAM: NLP/P60; KEGG: cpi:Cpin_4708 NLP/P60 protein YP_004580545.1 KEGG: fjo:Fjoh_3263 gpW/GP25 family protein YP_004580546.1 KEGG: cpi:Cpin_2305 hypothetical protein YP_004580547.1 KEGG: fjo:Fjoh_3280 PKD domain-containing protein; PFAM: PKD; SMART: PKD YP_004580548.1 KEGG: cpi:Cpin_2310 hypothetical protein YP_004580549.1 KEGG: cao:Celal_3743 hypothetical protein YP_004580550.1 PFAM: Magnesium chelatase, ChlI subunit; KEGG: cao:Celal_3649 mg chelatase, subunit chli YP_004580551.1 PFAM: Resolvase, N-terminal; Recombinase; KEGG: cno:NT01CX_2203 DNA recombinase YP_004580552.1 KEGG: lby:Lbys_1065 virulence-associated e family protein YP_004580553.1 PFAM: Resolvase, N-terminal; KEGG: cat:CA2559_04260 hypothetical protein YP_004580554.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nde:NIDE1755 hypothetical protein YP_004580555.1 PFAM: Protein of unknown function DUF2075; Excinuclease ABC, C subunit, N-terminal; KEGG: cgt:cgR_2962 hypothetical protein YP_004580556.1 KEGG: osp:Odosp_1285 MazG nucleotide pyrophosphohydrolase YP_004580557.1 PFAM: Tetratricopeptide TPR-1; KEGG: pph:Ppha_1121 tetratricopeptide TPR_2 repeat protein YP_004580558.1 PFAM: Protein of unknown function DUF159; KEGG: rbi:RB2501_08510 hypothetical protein YP_004580559.1 KEGG: bal:BACI_pCIXO101870 hypothetical protein YP_004580561.1 KEGG: fjo:Fjoh_2970 hypothetical protein YP_004580562.1 KEGG: gfo:GFO_2119 membrane protein YP_004580563.1 KEGG: fjo:Fjoh_2970 hypothetical protein YP_004580564.1 KEGG: gfo:GFO_2119 membrane protein YP_004580565.1 KEGG: gfo:GFO_2119 membrane protein YP_004580566.1 PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; KEGG: gfo:GFO_2118 two-component system sensor histidine kinase YP_004580567.1 PFAM: Aldehyde dehydrogenase; KEGG: fjo:Fjoh_4713 aldehyde dehydrogenase YP_004580568.1 PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: zpr:ZPR_1699 pseudouridylate synthase YP_004580569.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: cat:CA2559_10683 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004580570.1 KEGG: cly:Celly_2676 hypothetical protein YP_004580571.1 TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: fps:FP0884 L-serine ammonia-lyase; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain YP_004580572.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: fbc:FB2170_12941 molecular chaperone DnaK; PFAM: Heat shock protein 70 YP_004580573.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bba:Bd2156 2-nitropropane dioxygenase YP_004580574.1 KEGG: rbi:RB2501_00996 hypothetical protein YP_004580575.1 KEGG: rbi:RB2501_07170 hypothetical protein YP_004580576.1 KEGG: fbc:FB2170_12926 amino-acid acetyltransferase YP_004580577.1 PFAM: Phospholipase/carboxylesterase; KEGG: cao:Celal_3397 phospholipase/carboxylesterase YP_004580578.1 KEGG: fbc:FB2170_12916 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_004580579.1 KEGG: gfo:GFO_2076 isochorismate synthase; TIGRFAM: Isochorismate synthase; PFAM: Chorismate binding, C-terminal YP_004580580.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; TIGRFAM: Menaquinone biosynthesis protein MenD; KEGG: zpr:ZPR_1715 menaquinone biosynthesis protein MenD; HAMAP: Menaquinone biosynthesis protein MenD YP_004580581.1 KEGG: hba:Hbal_0441 hypothetical protein YP_004580582.1 KEGG: zpr:ZPR_1718 nucleic acid-binding domain-containing protein YP_004580583.1 KEGG: cao:Celal_1753 hypothetical protein YP_004580584.1 TIGRFAM: Naphthoate synthase; KEGG: gfo:GFO_2070 naphthoate synthase; PFAM: Crotonase, core YP_004580585.1 KEGG: gfo:GFO_2313 1,4-dihydroxy-2-naphthoateoctaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_004580586.1 KEGG: zpr:ZPR_3063 O-succinylbenzoate synthase; manually curated; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_004580587.1 PFAM: Abortive infection protein; KEGG: cat:CA2559_08301 hypothetical protein YP_004580588.1 KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004580589.1 KEGG: cly:Celly_2698 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_004580590.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cat:CA2559_07155 hypothetical protein YP_004580591.1 KEGG: cao:Celal_3415 methylcrotonoyl-CoA carboxylase; PFAM: Carboxyl transferase YP_004580592.1 PFAM: NADPH-dependent FMN reductase; KEGG: fbc:FB2170_13086 NADPH-dependent FMN reductase YP_004580593.1 KEGG: psn:Pedsa_2078 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004580594.1 PFAM: Pirin, N-terminal; KEGG: fjo:Fjoh_1735 pirin domain-containing protein YP_004580595.1 KEGG: fbc:FB2170_12811 hypothetical protein YP_004580596.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: cly:Celly_2703 ATP-binding cassette protein, ChvD family; SMART: ATPase, AAA+ type, core YP_004580599.1 KEGG: cly:Celly_2704 metal-dependent hydrolase YP_004580600.1 KEGG: cat:CA2559_08341 hypothetical protein YP_004580601.1 KEGG: mtt:Ftrac_3600 hypothetical protein YP_004580602.1 PFAM: PemK-like protein; KEGG: mtt:Ftrac_3601 transcriptional modulator of maze/toxin, mazf YP_004580603.1 KEGG: cat:CA2559_08346 hypothetical protein YP_004580604.1 KEGG: svo:SVI_3076 hypothetical protein YP_004580605.1 KEGG: cat:CA2559_08351 hypothetical protein YP_004580606.1 KEGG: mmw:Mmwyl1_1170 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain YP_004580607.1 KEGG: cat:CA2559_11863 hypothetical protein YP_004580608.1 KEGG: cat:CA2559_05230 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal YP_004580609.1 KEGG: cat:CA2559_11868 hypothetical protein YP_004580610.1 KEGG: cat:CA2559_12338 hypothetical protein YP_004580612.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cat:CA2559_09031 transcriptional regulator, MarR family protein YP_004580613.1 PFAM: Ureohydrolase; KEGG: fps:FP1700 hypothetical protein YP_004580614.1 KEGG: fbc:FB2170_12791 hypothetical protein YP_004580615.1 PFAM: Amidohydrolase 1; TIGRFAM: Imidazolonepropionase; HAMAP: Imidazolonepropionase; KEGG: gfo:GFO_0758 imidazolonepropionase YP_004580617.1 PFAM: Cyclic nucleotide-binding; KEGG: fjo:Fjoh_4303 cyclic nucleotide-binding protein YP_004580618.1 PFAM: Fumarate lyase; Fumarase C, C-terminal; TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: cly:Celly_2707 fumarate hydratase class II YP_004580619.1 KEGG: msu:MS0444 hypothetical protein YP_004580620.1 PFAM: Protein of unknown function DUF2219; KEGG: cat:CA2559_07595 hypothetical protein YP_004580621.1 KEGG: cly:Celly_2709 fumarate hydratase YP_004580622.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: cat:CA2559_09223 TonB-dependent receptor YP_004580623.1 PFAM: Arsenate reductase-like; KEGG: coc:Coch_1881 arsenate reductase YP_004580624.1 KEGG: cly:Celly_2712 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like YP_004580625.1 manually curated YP_004580626.1 KEGG: cly:Celly_2715 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004580627.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: cat:CA2559_08086 hypothetical protein YP_004580628.1 TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: cat:CA2559_08096 hypothetical protein; PFAM: Uncharacterised protein family UPF0133 YP_004580629.1 KEGG: fbc:FB2170_12726 hypothetical protein; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain YP_004580630.1 KEGG: zpr:ZPR_2343 cysteine synthase/cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004580631.1 KEGG: cly:Celly_2722 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II YP_004580632.1 KEGG: cao:Celal_3440 hypothetical protein YP_004580633.1 KEGG: gfo:GFO_1792 hypothetical protein YP_004580634.1 KEGG: cat:CA2559_08131 hypothetical protein YP_004580635.1 PFAM: Protein of unknown function, membrane YfhO; KEGG: gfo:GFO_1791 hypothetical protein YP_004580636.1 PFAM: Glycosyl transferase, group 1; KEGG: fps:FP1797 glycosyl transferase, group 1 family protein YP_004580637.1 PFAM: Polysaccharide biosynthesis protein; KEGG: cly:Celly_2728 polysaccharide biosynthesis protein YP_004580638.1 KEGG: cly:Celly_2729 hypothetical protein YP_004580639.1 KEGG: gfo:GFO_0617 DEAD box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal YP_004580640.1 KEGG: fps:FP1108 hypothetical protein YP_004580641.1 KEGG: cly:Celly_0640 hypothetical protein YP_004580642.1 KEGG: gfo:GFO_1787 UvrABC system protein A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like YP_004580643.1 KEGG: zpr:ZPR_2352 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004580644.1 KEGG: gfo:GFO_1785 hypothetical protein YP_004580645.1 PFAM: HhH-GPD domain; KEGG: fjo:Fjoh_2438 DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain YP_004580646.1 KEGG: cly:Celly_2734 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_004580647.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: fbc:FB2170_15148 hypothetical protein; PFAM: Protein of unknown function DUF28 YP_004580648.1 KEGG: chu:CHU_0630 hypothetical protein YP_004580649.1 SMART: Peptidase S41; TIGRFAM: Peptidase S41A, C-terminal protease; KEGG: fjo:Fjoh_2561 C-terminal processing peptidase; PFAM: Peptidase S41 YP_004580650.1 KEGG: fbc:FB2170_15143 pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase YP_004580651.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: fbc:FB2170_15138 NAD dependent epimerase/dehydratase YP_004580652.1 PFAM: Glutaminase, core; TIGRFAM: glutaminase A; HAMAP: Glutaminase, core; KEGG: cly:Celly_0289 glutaminase YP_004580653.1 PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: fbc:FB2170_15133 aminomethyltransferase YP_004580654.1 PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: gfo:GFO_0851 secreted Xaa-Pro aminopeptidase YP_004580655.1 KEGG: cpi:Cpin_1106 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004580656.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cly:Celly_0287 NAD-dependent epimerase/dehydratase YP_004580657.1 KEGG: cao:Celal_2684 hypothetical protein YP_004580658.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cao:Celal_2685 TonB-dependent receptor YP_004580659.1 KEGG: gfo:GFO_1465 secreted protein YP_004580660.1 KEGG: cat:CA2559_08661 hypothetical protein YP_004580661.1 KEGG: fbc:FB2170_10721 hypothetical protein YP_004580662.1 PFAM: Protein of unknown function DUF2302; KEGG: cao:Celal_4204 hypothetical protein YP_004580663.1 KEGG: cat:CA2559_08686 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region YP_004580664.1 HAMAP: Phosphoserine aminotransferase; KEGG: fbc:FB2170_10736 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004580665.1 KEGG: gfo:GFO_1471 hypothetical protein YP_004580666.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: cly:Celly_2988 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein YP_004580667.1 KEGG: dak:DaAHT2_0594 hypothetical protein YP_004580668.1 KEGG: zpr:ZPR_2727 translation-associated GTPase; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related YP_004580669.1 KEGG: gfo:GFO_1977 PA-phosphatase related phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase YP_004580670.1 KEGG: cat:CA2559_09718 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like YP_004580671.1 PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; KEGG: cly:Celly_2984 DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal YP_004580672.1 PFAM: Integral membrane protein TerC; KEGG: cly:Celly_2473 integral membrane protein TerC YP_004580673.1 KEGG: fbc:FB2170_10791 hypothetical protein YP_004580674.1 KEGG: zpr:ZPR_2721 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004580675.1 PFAM: Peptidase M14, carboxypeptidase A; KEGG: gfo:GFO_1485 M14 family peptidase YP_004580676.1 KEGG: fps:FP0843 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type YP_004580677.1 KEGG: fjo:Fjoh_2807 hypothetical protein YP_004580678.1 KEGG: gfo:GFO_1491 hypothetical protein YP_004580679.1 PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: cat:CA2559_10553 3-dehydroquinate synthase YP_004580680.1 PFAM: Proline dehydrogenase; KEGG: cly:Celly_2975 proline dehydrogenase YP_004580681.1 KEGG: fbc:FB2170_10831 hypothetical protein YP_004580682.1 KEGG: cao:Celal_4180 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal YP_004580683.1 KEGG: gfo:GFO_1780 membrane protein YP_004580685.1 KEGG: cat:CA2559_10268 ATP/GTP-binding transmembrane protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria YP_004580686.1 KEGG: zpr:ZPR_2362 two-component response transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; PglZ domain; SMART: Signal transduction response regulator, receiver region YP_004580687.1 KEGG: cat:CA2559_08156 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region YP_004580688.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: cat:CA2559_08161 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat YP_004580689.1 TIGRFAM: Beta-hydroxyacyl-ACP dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: (3R)-hydroxymyristoyl-ACP dehydratase; KEGG: cat:CA2559_08166 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-ACP dehydratase, FabA/FabZ YP_004580690.1 TIGRFAM: Acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase; KEGG: gfo:GFO_1774 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat YP_004580691.1 TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: zpr:ZPR_2367 translation elongation factor P 2; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central YP_004580692.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; KEGG: fjo:Fjoh_2900 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004580693.1 KEGG: cat:CA2559_08191 hypothetical protein YP_004580694.1 TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: cly:Celly_2964 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase YP_004580695.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: zpr:ZPR_2377 peptidase, M16 family protein YP_004580696.1 KEGG: cat:CA2559_08226 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-ACP reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004580697.1 KEGG: cat:CA2559_08231 hypothetical protein YP_004580698.1 KEGG: cly:Celly_2960 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein YP_004580699.1 PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: cao:Celal_4159 ATP phosphoribosyltransferase YP_004580700.1 PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: cat:CA2559_09011 histidinol dehydrogenase YP_004580701.1 PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: shg:Sph21_5144 histidinol-phosphate aminotransferase YP_004580702.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: cat:CA2559_09001 hypothetical protein YP_004580703.1 PFAM: Imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase, central region; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: fjo:Fjoh_2875 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_004580704.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: fjo:Fjoh_2874 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal YP_004580705.1 KEGG: cly:Celly_0975 hypothetical protein YP_004580706.1 PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: cly:Celly_2954 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase YP_004580707.1 PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: cly:Celly_2953 imidazole glycerol phosphate synthase subunit HisF YP_004580708.1 TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; KEGG: fbc:FB2170_10966 histidine biosynthesis bifunctional protein; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase YP_004580709.1 KEGG: cat:CA2559_10453 hypothetical protein; PFAM: Peptidase S41; SMART: Peptidase S41 YP_004580710.1 PFAM: LytTr DNA-binding region; KEGG: fjo:Fjoh_0682 response regulator receiver protein YP_004580711.1 KEGG: fbc:FB2170_11181 hypothetical protein YP_004580712.1 KEGG: gfo:GFO_1748 tRNA pseudouridine synthase A; manually curated; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004580713.1 PFAM: Ferritin/Dps protein; KEGG: cly:Celly_1591 ferritin Dps family protein YP_004580714.1 PFAM: Mechanosensitive ion channel MscS; Conserved TM helix; KEGG: cly:Celly_1590 mechanosensitive ion channel protein MscS YP_004580715.1 KEGG: cly:Celly_1592 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328 YP_004580717.1 KEGG: fbc:FB2170_11211 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453 YP_004580718.1 KEGG: zpr:ZPR_2601 hypothetical protein YP_004580719.1 PFAM: Protein of unknown function DUF72; KEGG: fbc:FB2170_11221 hypothetical protein YP_004580720.1 PFAM: Thioesterase superfamily; KEGG: gfo:GFO_1516 acyl-CoA thioester hydrolase YP_004580721.1 KEGG: cat:CA2559_11958 hypothetical protein YP_004580722.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: kko:Kkor_1197 peptidase M16 domain-containing protein YP_004580723.1 KEGG: cat:CA2559_09313 hypothetical protein YP_004580724.1 KEGG: cat:CA2559_09318 hypothetical protein YP_004580725.1 KEGG: cat:CA2559_09333 hypothetical protein YP_004580726.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; KEGG: cao:Celal_2701 pyruvate phosphate dikinase pep/pyruvate-binding protein YP_004580727.1 KEGG: gfo:GFO_1583 hypothetical protein YP_004580728.1 PFAM: Uncharacterised protein family UPF0057; KEGG: rbi:RB2501_02755 hypothetical protein YP_004580729.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cly:Celly_2836 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004580730.1 KEGG: cat:CA2559_10033 zinc-containing alcohol dehydrogenase superfamily protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004580731.1 PFAM: Ribonuclease BN-related; KEGG: cly:Celly_2483 ribonuclease BN YP_004580732.1 KEGG: cly:Celly_2478 succinate-semialdehyde dehydrogenase (NAD(P)(+)); PFAM: Aldehyde dehydrogenase YP_004580733.1 KEGG: cat:CA2559_10148 ATP-independent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580734.1 KEGG: pbr:PB2503_12219 hypothetical protein YP_004580735.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: fjo:Fjoh_0978 hypothetical protein YP_004580736.1 TIGRFAM: Protein of unknown function DUF11; KEGG: rbi:RB2501_06870 hypothetical protein YP_004580737.1 KEGG: fjo:Fjoh_0980 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Fibrinogen binding YP_004580738.1 KEGG: fps:FP0014 adhesin precursor SprC YP_004580739.1 KEGG: fjo:Fjoh_0983 hypothetical protein YP_004580740.1 KEGG: fjo:Fjoh_0984 hypothetical protein YP_004580741.1 KEGG: cat:CA2559_06760 outer membrane protein YP_004580742.1 KEGG: cly:Celly_0378 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004580743.1 PFAM: Helix-turn-helix, HxlR type; KEGG: fjo:Fjoh_0113 HxlR family transcriptional regulator YP_004580744.1 PFAM: Nitroreductase-like; KEGG: cly:Celly_2865 nitroreductase YP_004580745.1 KEGG: cly:Celly_2866 zinc-binding alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004580746.1 PFAM: Cupin 2, conserved barrel; KEGG: cao:Celal_3971 hypothetical protein YP_004580747.1 KEGG: cly:Celly_2868 hypothetical protein YP_004580748.1 PFAM: Major royal jelly-related; KEGG: cly:Celly_2869 major royal jelly protein YP_004580749.1 SMART: Helix-turn-helix, AraC domain; KEGG: cly:Celly_2870 AraC family transcriptional regulator YP_004580750.1 PFAM: Crotonase, core; KEGG: cly:Celly_2871 enoyl-CoA hydratase/isomerase YP_004580751.1 KEGG: cly:Celly_2872 NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004580752.1 KEGG: cly:Celly_1779 2OG-Fe(II) oxygenase YP_004580753.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dat:HRM2_14960 dehydrogenase/reductase YP_004580754.1 KEGG: ddf:DEFDS_0726 multiple antibiotic transporter MarC family; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_004580755.1 PFAM: Flavodoxin-like fold; KEGG: cat:CA2559_10213 probable NADP(H) oxidoreductase YP_004580756.1 KEGG: cat:CA2559_10218 potassium efflux system protein; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal YP_004580757.1 KEGG: ppr:PBPRB0725 hypothetical protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580758.1 KEGG: bam:Bamb_4312 hypothetical protein YP_004580759.1 PFAM: Protein of unknown function DUF1486; KEGG: fbc:FB2170_14033 hypothetical protein YP_004580760.1 PFAM: Ferric reductase-like transmembrane component, N-terminal; KEGG: bmr:BMI_II984 sulfite oxidase subunit YedZ YP_004580762.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: cly:Celly_2855 hypothetical protein YP_004580763.1 KEGG: cat:CA2559_11433 catalase HPII; PFAM: Catalase related subgroup; Catalase-related immune responsive; ThiJ/PfpI YP_004580764.1 KEGG: cao:Celal_0867 hypothetical protein YP_004580765.1 KEGG: cly:Celly_1434 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_004580766.1 KEGG: fps:FP1846 hypothetical protein YP_004580767.1 PFAM: NUDIX hydrolase domain; KEGG: cly:Celly_2880 NUDIX hydrolase YP_004580768.1 KEGG: cly:Celly_2881 hypothetical protein YP_004580769.1 PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: cly:Celly_2882 periplasmic-binding protein/LacI transcriptional regulator YP_004580770.1 PFAM: ABC transporter-like; KEGG: cly:Celly_2883 monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core YP_004580771.1 PFAM: Bacterial inner-membrane translocator; KEGG: cly:Celly_2884 ABC-type transporter, integral membrane subunit YP_004580772.1 KEGG: cly:Celly_2885 mannitol 2-dehydrogenase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal YP_004580773.1 KEGG: cly:Celly_2886 fructokinase; PFAM: Carbohydrate/purine kinase YP_004580774.1 PFAM: ThiJ/PfpI; KEGG: cly:Celly_2840 ThiJ/PfpI domain-containing protein YP_004580775.1 KEGG: cly:Celly_2841 alcohol dehydrogenase (NADP(+)); PFAM: Alcohol dehydrogenase, iron-type YP_004580776.1 KEGG: cly:Celly_2842 2-alkenal reductase; PFAM: Alcohol dehydrogenase, zinc-binding YP_004580777.1 PFAM: Nitroreductase-like; KEGG: cly:Celly_2843 nitroreductase YP_004580778.1 KEGG: cao:Celal_1270 nucleoside-diphosphate-sugar epimerase YP_004580779.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cly:Celly_2844 regulatory protein TetR YP_004580780.1 manually curated; KEGG: cly:Celly_2878 12-oxophytodienoate reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_004580781.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: cao:Celal_3886 transporter, NhaC family YP_004580782.1 KEGG: cly:Celly_2894 hypothetical protein YP_004580783.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cly:Celly_2887 regulatory protein TetR YP_004580784.1 KEGG: cly:Celly_2888 hypothetical protein YP_004580785.1 KEGG: cao:Celal_2524 regulatory protein LuxR YP_004580786.1 KEGG: fbc:FB2170_04930 nicotinic acid mononucleotide adenyltransferase YP_004580787.1 KEGG: cao:Celal_0131 luciferase family oxidoreductase, group 1; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004580788.1 KEGG: gfo:GFO_1594 hypothetical protein YP_004580789.1 PFAM: KAP P-loop; KEGG: bfr:BF0134 hypothetical protein YP_004580790.1 KEGG: zpr:ZPR_2298 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004580791.1 KEGG: zpr:ZPR_1916 hypothetical protein YP_004580792.1 KEGG: rbi:RB2501_10292 hypothetical protein YP_004580793.1 TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; KEGG: cat:CA2559_10503 site-specific recombinase, phage integrase family/ribosomal subunitinterface protein YP_004580794.1 KEGG: cat:CA2559_11313 hypothetical protein; PFAM: Protein of unknown function methylase SMART: Pseudouridine synthase/archaeosine transglycosylase YP_004580795.1 KEGG: psn:Pedsa_1051 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580796.1 KEGG: cly:Celly_2794 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580797.1 PFAM: Protein of unknown function DUF1853; KEGG: cly:Celly_2857 hypothetical protein YP_004580798.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: fjo:Fjoh_2289 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger YP_004580799.1 manually curated; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; KEGG: zpr:ZPR_2285 pseudouridylate synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F YP_004580800.1 PFAM: Mechanosensitive ion channel MscS; KEGG: cly:Celly_2827 mechanosensitive ion channel protein MscS YP_004580801.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fbc:FB2170_07659 hypothetical protein YP_004580802.1 PFAM: ABC transporter-like; KEGG: cao:Celal_1045 xenobiotic-transporting atpase; SMART: ATPase, AAA+ type, core YP_004580803.1 PFAM: Secretion protein HlyD; KEGG: cao:Celal_1044 biotin/lipoyl attachment domain-containing protein YP_004580804.1 PFAM: Outer membrane efflux protein; KEGG: cao:Celal_1043 outer membrane efflux protein YP_004580805.1 KEGG: fbc:FB2170_11566 cold shock protein DNA-binding protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004580806.1 KEGG: fps:FP1760 hypothetical protein YP_004580808.1 KEGG: cat:CA2559_10943 oxidoreductase; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_004580809.1 PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: fjo:Fjoh_2839 2OG-Fe(II) oxygenase YP_004580810.1 PFAM: Translation initiation factor SUI1; KEGG: cly:Celly_2924 translation initiation factor SUI1 YP_004580811.1 KEGG: gfo:GFO_1619 hypothetical protein YP_004580812.1 PFAM: Nucleoside phosphorylase; KEGG: cly:Celly_2926 purine or other phosphorylase family 1 YP_004580813.1 KEGG: cly:Celly_2927 hypothetical protein YP_004580815.1 TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: cly:Celly_2928 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like YP_004580816.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: cly:Celly_2929 C4-dicarboxylate anaerobic carrier YP_004580817.1 KEGG: cly:Celly_2581 zeaxanthin epoxidase; PFAM: Monooxygenase, FAD-binding YP_004580818.1 KEGG: ran:Riean_1035 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR YP_004580819.1 KEGG: fjo:Fjoh_2913 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core YP_004580820.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: fps:FP0768 hypothetical protein YP_004580822.1 KEGG: sdn:Sden_1468 aspartate racemase YP_004580823.1 PFAM: Protein of unknown function DUF2260; KEGG: cao:Celal_4080 hypothetical protein YP_004580824.1 KEGG: cao:Celal_4081 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor YP_004580825.1 PFAM: Protein of unknown function DUF1622; KEGG: prw:PsycPRwf_0065 hypothetical protein YP_004580826.1 KEGG: cly:Celly_3132 hypothetical protein YP_004580827.1 HAMAP: Glutathione synthetase, prokaryotic; KEGG: shg:Sph21_4118 glutathione synthase; PFAM: Prokaryotic glutathione synthetase, ATP-binding YP_004580828.1 PFAM: Protein of unknown function DUF1704; KEGG: gfo:GFO_1740 hypothetical protein YP_004580829.1 KEGG: cat:CA2559_11003 hypothetical protein YP_004580830.1 KEGG: gfo:GFO_0250 hypothetical protein YP_004580831.1 PFAM: Rhodanese-like; KEGG: cao:Celal_0335 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like YP_004580832.1 HAMAP: Glutathione synthetase, prokaryotic; KEGG: rbi:RB2501_14639 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding YP_004580833.1 PFAM: Sodium:dicarboxylate symporter; KEGG: cly:Celly_2824 sodium:dicarboxylate symporter YP_004580834.1 TIGRFAM: Chorismate synthase; KEGG: fps:FP0765 chorismate synthase; PFAM: Chorismate synthase YP_004580835.1 PFAM: Metallophosphoesterase; KEGG: cao:Celal_3807 metallophosphoesterase YP_004580836.1 KEGG: zpr:ZPR_2734 FAD-linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal YP_004580837.1 KEGG: cat:CA2559_11038 hypothetical protein YP_004580838.1 PFAM: Glycosyl transferase, group 1; KEGG: fjo:Fjoh_4580 glycosyl transferase, group 1 YP_004580839.1 KEGG: cat:CA2559_11048 hydrolase/beta lactamase fusion protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related YP_004580840.1 TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: fjo:Fjoh_1712 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase; Amino acid-binding ACT YP_004580841.1 KEGG: gfo:GFO_1635 hypothetical protein YP_004580842.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: gfo:GFO_1345 hypothetical protein YP_004580843.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: zpr:ZPR_1723 hypothetical protein YP_004580845.1 PFAM: Cysteine-rich region, CCG; KEGG: cly:Celly_2605 hypothetical protein YP_004580846.1 KEGG: cat:CA2559_11068 hypothetical protein YP_004580847.1 KEGG: cao:Celal_3112 hypothetical protein YP_004580848.1 PFAM: Mammalian cell entry related; KEGG: zpr:ZPR_2741 MCE family protein YP_004580849.1 PFAM: Cell wall hydrolase/autolysin, catalytic; KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase; SMART: Cell wall hydrolase/autolysin, catalytic YP_004580850.1 KEGG: zpr:ZPR_2744 hypothetical protein YP_004580851.1 KEGG: cly:Celly_2600 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP YP_004580852.1 KEGG: fps:FP2281 hypothetical protein; PFAM: Amine oxidase YP_004580853.1 KEGG: cao:Celal_1606 multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_004580854.1 KEGG: cat:CA2559_10383 hypothetical protein YP_004580855.1 KEGG: cly:Celly_2599 hypothetical protein YP_004580856.1 TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cly:Celly_2598 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004580857.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; KEGG: fjo:Fjoh_4591 6-phosphofructokinase YP_004580858.1 PFAM: Protein of unknown function DUF490; KEGG: cat:CA2559_13133 hypothetical protein YP_004580859.1 PFAM: Peptidase M22, glycoprotease; TIGRFAM: glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: cat:CA2559_13138 glycoprotease YP_004580860.1 KEGG: phe:Phep_0290 polysulfide reductase NrfD YP_004580861.1 KEGG: ate:Athe_0639 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004580862.1 KEGG: fps:FP1617 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E YP_004580863.1 KEGG: gfo:GFO_1647 hypothetical protein YP_004580864.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: fjo:Fjoh_4596 tRNA/rRNA methyltransferase (SpoU) YP_004580865.1 PFAM: Uncharacterised protein family UPF0118; KEGG: fbc:FB2170_09836 hypothetical protein YP_004580866.1 KEGG: cao:Celal_3097 hypothetical protein YP_004580867.1 PFAM: Metallophosphoesterase; KEGG: fba:FIC_01803 hypothetical protein YP_004580868.1 KEGG: psn:Pedsa_1472 ATP dependent helicase, Lhr family; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004580869.1 PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; KEGG: fba:FIC_01805 DNA ligase YP_004580870.1 KEGG: fba:FIC_01806 mRNA 3'-end processing factor YP_004580871.1 KEGG: fbc:FB2170_05180 hypothetical protein YP_004580872.1 TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Metal-dependent phosphohydrolase, 7TM intracellular region; KEGG: gfo:GFO_1508 7TM-receptor; SMART: Metal-dependent phosphohydrolase, HD region YP_004580873.1 KEGG: fbc:FB2170_15078 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004580874.1 PFAM: NLP/P60; KEGG: cat:CA2559_11858 dipeptidyl peptidase VI YP_004580875.1 KEGG: cat:CA2559_11133 TPR repeat protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat YP_004580876.1 SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: cat:CA2559_11138 DNA gyrase A subunit; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_004580877.1 KEGG: cat:CA2559_11148 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core YP_004580878.1 KEGG: gfo:GFO_1828 hypothetical protein YP_004580879.1 TIGRFAM: Histidine ammonia-lyase; KEGG: fjo:Fjoh_2576 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase YP_004580880.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: fps:FP0274 hypothetical protein YP_004580881.1 KEGG: fbc:FB2170_15108 sugar kinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal YP_004580882.1 TIGRFAM: Aspartate kinase region; KEGG: cat:CA2559_07425 aspartokinase/homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding YP_004580883.1 PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: Homoserine kinase; HAMAP: Homoserine kinase; KEGG: cly:Celly_2409 homoserine kinase YP_004580884.1 TIGRFAM: Threonine synthase; KEGG: cly:Celly_0286 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004580885.1 KEGG: cao:Celal_3479 hypothetical protein YP_004580886.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: cao:Celal_3478 gtp cyclohydrolase 1 YP_004580887.1 PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: gfo:GFO_1461 peptide methionine sulfoxide reductase YP_004580888.1 KEGG: gfo:GFO_1460 hypothetical protein YP_004580889.1 PFAM: ABC transporter-like; KEGG: cao:Celal_3477 sulfate-transporting atpase; SMART: ATPase, AAA+ type, core YP_004580890.1 KEGG: cat:CA2559_08071 cytoplasmic membrane protein YP_004580891.1 KEGG: fjo:Fjoh_2453 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02757; PFAM: Conserved hypothetical protein CHP02757 YP_004580892.1 KEGG: zpr:ZPR_2543 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; SMART: ATP-binding region, ATPase-like; GAF YP_004580894.1 PFAM: Peptidase M61; KEGG: zpr:ZPR_2276 M61 family glycyl aminopeptidase YP_004580895.1 PFAM: Glycosyl transferase, family 2; KEGG: fbc:FB2170_12611 group 2 family glycosyl transferase YP_004580896.1 TIGRFAM: Double-transmembrane region, N-terminal; KEGG: cat:CA2559_08051 inter-alpha-trypsin inhibitor heavy chain H2-like protein, precursor YP_004580897.1 PFAM: Amidohydrolase 1; KEGG: zpr:ZPR_2541 dihydroorotase YP_004580898.1 KEGG: fjo:Fjoh_2448 hypothetical protein YP_004580899.1 PFAM: Phospholipase/carboxylesterase; KEGG: cat:CA2559_08036 hypothetical protein YP_004580900.1 KEGG: gfo:GFO_1451 hypothetical protein YP_004580901.1 KEGG: cly:Celly_2736 beta-lactamase domain-containing protein YP_004580902.1 KEGG: zpr:ZPR_2533 hypothetical protein YP_004580903.1 KEGG: cao:Celal_2909 hypothetical protein YP_004580904.1 KEGG: fbc:FB2170_15153 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_004580905.1 PFAM: Alcohol dehydrogenase, iron-type; KEGG: cly:Celly_2580 iron-containing alcohol dehydrogenase YP_004580906.1 PFAM: Chloramphenicol acetyltransferase; KEGG: cao:Celal_2906 chloramphenicol acetyltransferase YP_004580907.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: cao:Celal_2905 haloacid dehalogenase domain protein hydrolase YP_004580908.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: cao:Celal_2904 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase YP_004580909.1 KEGG: fbc:FB2170_15173 hypothetical protein YP_004580910.1 KEGG: fbc:FB2170_15178 ATP-dependent exoDNAse subunit alpha YP_004580911.1 KEGG: cat:CA2559_10598 hypothetical protein YP_004580912.1 KEGG: fjo:Fjoh_4516 hypothetical protein YP_004580913.1 PFAM: Protein of unknown function methylase KEGG: cly:Celly_2573 methyltransferase YP_004580915.1 PFAM: tRNA--hydroxylase; KEGG: cat:CA2559_11898 hydroxylase YP_004580916.1 KEGG: cat:CA2559_11903 hypothetical protein YP_004580917.1 PFAM: Ppx/GppA phosphatase; KEGG: gfo:GFO_1832 Ppx/GppA phosphatase YP_004580918.1 TIGRFAM: polyphosphate kinase 1; KEGG: cly:Celly_2567 polyphosphate kinase 1; PFAM: Polyphosphate kinase YP_004580919.1 PFAM: Phosphoglycerate mutase; KEGG: fbc:FB2170_15218 phosphoglycerate mutase family domain-containing protein YP_004580920.1 KEGG: cao:Celal_1478 hypothetical protein YP_004580921.1 KEGG: fjo:Fjoh_4538 von Willebrand factor, type A YP_004580922.1 KEGG: fjo:Fjoh_4538 von Willebrand factor, type A YP_004580923.1 KEGG: fjo:Fjoh_4538 von Willebrand factor, type A YP_004580924.1 TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; KEGG: gfo:GFO_1837 hypothetical protein YP_004580925.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; KEGG: fjo:Fjoh_3973 OmpA/MotB domain-containing protein YP_004580926.1 PFAM: SCP-like extracellular; KEGG: gfo:GFO_1840 SCP-like extracellular protein YP_004580927.1 PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: cly:Celly_0172 pyridoxine/pyridoxamine 5'-phosphate oxidase YP_004580928.1 KEGG: cpr:CPR_0874 hypothetical protein YP_004580929.1 KEGG: cao:Celal_2890 RNase Z; TIGRFAM: Ribonuclease Z; HAMAP: Ribonuclease Z YP_004580930.1 KEGG: rbi:RB2501_12774 ribonuclease Z YP_004580931.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: cao:Celal_2887 aspartate carbamoyltransferase YP_004580932.1 KEGG: zpr:ZPR_1905 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase YP_004580933.1 PFAM: Ribosomal protein S1, RNA binding domain; KEGG: zpr:ZPR_1889 30S ribosomal protein S1 YP_004580934.1 KEGG: cao:Celal_2884 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004580935.1 TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: cao:Celal_2883 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase YP_004580936.1 KEGG: pfh:PFHG_05173 hypothetical protein YP_004580937.1 KEGG: cat:CA2559_10348 hypothetical protein YP_004580938.1 KEGG: ssp:SSP2357 extracellular amidase; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004580939.1 KEGG: fps:FP0019 membrane-bound lytic murein transglycosylase D precursor; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_004580940.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: cat:CA2559_09893 ATP-dependent protease; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core YP_004580941.1 KEGG: fbc:FB2170_15308 hypothetical protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004580942.1 KEGG: cat:CA2559_11198 hypothetical protein YP_004580943.1 KEGG: cao:Celal_2879 hypothetical protein YP_004580944.1 KEGG: cat:CA2559_11208 hypothetical protein YP_004580945.1 KEGG: mar:MAE_58460 hypothetical protein YP_004580946.1 KEGG: cao:Celal_2877 major facilitator transporter YP_004580947.1 PFAM: Peptidase M48, Ste24p; KEGG: cly:Celly_0187 peptidase M48 Ste24p YP_004580948.1 KEGG: fbc:FB2170_15338 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31 YP_004580949.1 KEGG: cao:Celal_2874 1,4-alpha-glucan-branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region YP_004580950.1 KEGG: phe:Phep_3085 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat YP_004580951.1 PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: phe:Phep_3086 glycogen/starch synthase, ADP-glucose type YP_004580952.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: cat:CA2559_12448 methionine sulfoxide reductase, SelR; PFAM: Methionine sulphoxide reductase B YP_004580953.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: zpr:ZPR_1876 peptide methionine sulfoxide reductase; PFAM: Methionine sulphoxide reductase B YP_004580954.1 PFAM: Protein of unknown function DUF1572; KEGG: fps:FP1585 hypothetical protein YP_004580955.1 KEGG: cao:Celal_2862 NADH dehydrogenase (ubiquinone); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004580956.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: fbc:FB2170_15363 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004580957.1 KEGG: gfo:GFO_1872 hypothetical protein YP_004580958.1 PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: cly:Celly_0196 3-dehydroquinate dehydratase, type II YP_004580959.1 KEGG: fba:FIC_00818 hypothetical protein YP_004580960.1 KEGG: cat:CA2559_11983 hypothetical protein YP_004580961.1 KEGG: cao:Celal_2864 tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004580962.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; KEGG: fjo:Fjoh_0123 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAC motif YP_004580963.1 SMART: Metal-dependent phosphohydrolase, HD region; K Homology; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; KEGG: fbc:FB2170_09191 hypothetical protein; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup YP_004580964.1 KEGG: gfo:GFO_1876 hypothetical protein YP_004580965.1 KEGG: fbc:FB2170_09181 hypothetical protein YP_004580966.1 KEGG: cat:CA2559_06690 hypothetical protein; manually curated; PFAM: Peptidase M23 YP_004580967.1 PFAM: TonB-dependent receptor, plug; KEGG: cat:CA2559_06685 hypothetical protein YP_004580968.1 KEGG: cts:Ctha_0890 integrase; manually curated; PFAM: Integrase, catalytic core, phage YP_004580969.1 KEGG: rms:RMA_0889 hypothetical protein YP_004580970.1 KEGG: bsa:Bacsa_2213 hypothetical protein YP_004580971.1 KEGG: cao:Celal_3325 hypothetical protein YP_004580972.1 KEGG: cpi:Cpin_6046 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_004580973.1 KEGG: cpi:Cpin_5965 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004580974.1 KEGG: cpi:Cpin_5970 hypothetical protein YP_004580976.1 PFAM: Amine oxidase; KEGG: sli:Slin_2753 amine oxidase YP_004580977.1 KEGG: cly:Celly_1465 hypothetical protein YP_004580978.1 KEGG: mtt:Ftrac_0107 hypothetical protein YP_004580979.1 PFAM: Metallophosphoesterase; KEGG: cly:Celly_0963 metallophosphoesterase YP_004580980.1 KEGG: coc:Coch_0676 hypothetical protein YP_004580982.1 KEGG: cat:CA2559_06305 transcriptional regulator, ArsR family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004580983.1 KEGG: cat:CA2559_06300 hypothetical protein YP_004580984.1 KEGG: cat:CA2559_06295 short chain dehydrogenase YP_004580985.1 KEGG: sli:Slin_2109 esterase; PFAM: esterase; SMART: Tetratricopeptide repeat YP_004580986.1 PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: btl:BALH_2223 PhnB protein YP_004580987.1 PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: phe:Phep_2291 3-demethylubiquinone-9 3-methyltransferase YP_004580988.1 KEGG: cly:Celly_1778 endoribonuclease L-PSP YP_004580989.1 KEGG: cly:Celly_1919 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580990.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cly:Celly_1918 major facilitator superfamily protein YP_004580991.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_2977 short-chain dehydrogenase/reductase SDR YP_004580992.1 KEGG: cat:CA2559_00460 hypothetical protein YP_004580993.1 KEGG: sli:Slin_3802 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004580994.1 KEGG: cat:CA2559_00470 hypothetical protein YP_004580995.1 PFAM: Small multidrug resistance protein; KEGG: dfe:Dfer_5569 small multidrug resistance protein YP_004580996.1 KEGG: cly:Celly_0109 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter YP_004580997.1 KEGG: cly:Celly_3067 hypothetical protein YP_004580998.1 KEGG: cao:Celal_0732 transcriptional regulator, hxlr family; manually curated; PFAM: Helix-turn-helix, HxlR type YP_004580999.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cat:CA2559_09323 glyoxalase YP_004581000.1 PFAM: Transglutaminase-like; KEGG: cat:CA2559_11163 hypothetical protein YP_004581001.1 KEGG: cly:Celly_0557 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel YP_004581002.1 KEGG: cao:Celal_3496 hypothetical protein YP_004581003.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cly:Celly_0385 alpha/beta hydrolase fold protein YP_004581004.1 KEGG: zpr:ZPR_1863 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004581005.1 KEGG: zpr:ZPR_1862 hypothetical protein YP_004581006.1 KEGG: cat:CA2559_08606 hypothetical protein YP_004581008.1 KEGG: fjo:Fjoh_3296 hypothetical protein YP_004581009.1 KEGG: cao:Celal_2609 hypothetical protein YP_004581010.1 KEGG: fbc:FB2170_09141 hypothetical protein YP_004581011.1 TIGRFAM: Ornithine aminotransferase; KEGG: cly:Celly_0230 ornithine aminotransferase; PFAM: Aminotransferase class-III YP_004581012.1 KEGG: cao:Celal_2604 23S rRNA m(5)u-1939 methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: (Uracil-5)-methyltransferase; Methyltransferase small YP_004581013.1 KEGG: fbc:FB2170_09111 hypothetical protein YP_004581014.1 KEGG: cat:CA2559_08566 hypothetical protein YP_004581015.1 KEGG: hau:Haur_3684 hypothetical protein YP_004581017.1 PFAM: Sulfatase; KEGG: ecy:ECSE_4248 hypothetical protein YP_004581018.1 KEGG: gfo:GFO_1890 hypothetical protein; PFAM: RNA methylase; THUMP YP_004581019.1 PFAM: Methyltransferase type 11; KEGG: fjo:Fjoh_2494 methyltransferase type 11 YP_004581020.1 PFAM: Zinc/iron permease; KEGG: cao:Celal_2599 zinc/iron permease YP_004581021.1 KEGG: cly:Celly_0236 hypothetical protein YP_004581022.1 KEGG: cly:Celly_0237 channel protein, hemolysin III family; TIGRFAM: HylII; PFAM: Hly-III related YP_004581023.1 KEGG: gfo:GFO_1901 hypothetical protein YP_004581024.1 KEGG: cat:CA2559_09738 hydrolase, PFAM: Peptidase M42 YP_004581025.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: cat:CA2559_02090 hypothetical protein YP_004581026.1 PFAM: NUDIX hydrolase domain; KEGG: cly:Celly_0305 NUDIX hydrolase YP_004581027.1 KEGG: ate:Athe_1066 hypothetical protein YP_004581029.1 KEGG: zpr:ZPR_3839 MarC family integral hypothetical protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_004581030.1 KEGG: cao:Celal_3474 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004581031.1 PFAM: Protein of unknown function DUF839, bacterial; KEGG: cao:Celal_3473 hypothetical protein YP_004581032.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: cao:Celal_1006 xenobiotic-transporting atpase; SMART: ATPase, AAA+ type, core YP_004581033.1 KEGG: fbc:FB2170_09721 bicyclomycin resistance protein; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004581035.1 PFAM: CsbD-like; KEGG: gfo:GFO_2266 hypothetical protein YP_004581036.1 PFAM: Patatin; KEGG: rfr:Rfer_1852 patatin YP_004581037.1 PFAM: Fatty acid desaturase, type 1; KEGG: fba:FIC_01750 fatty acid desaturase YP_004581038.1 PFAM: Cyclic nucleotide-binding; KEGG: cly:Celly_2896 cyclic nucleotide-binding protein YP_004581039.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: rbi:RB2501_02190 YCE I like family protein YP_004581040.1 PFAM: Cyclic nucleotide-binding; KEGG: fjo:Fjoh_3193 cyclic nucleotide-binding protein YP_004581041.1 PFAM: Beta-lactamase-related; Tetratricopeptide TPR2; KEGG: ccs:CCNA_03603 beta-lactamase; SMART: Tetratricopeptide repeat YP_004581042.1 TIGRFAM: Acetate--CoA ligase; KEGG: cly:Celly_1908 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_004581043.1 KEGG: gfo:GFO_2366 sodium:alanine symporter family protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter YP_004581044.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cat:CA2559_12083 transcriptional regulator, TetR family protein YP_004581045.1 KEGG: cly:Celly_0373 hypothetical protein YP_004581046.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gfo:GFO_0820 short chain dehydrogenase YP_004581047.1 KEGG: cao:Celal_2576 ethyl tert-butyl ether degradation EthD; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD YP_004581048.1 KEGG: cao:Celal_2575 hypothetical protein YP_004581049.1 PFAM: DSBA oxidoreductase; KEGG: gfo:GFO_0822 DsbA thioredoxin oxdioreductase-polyketide synthase YP_004581050.1 KEGG: glo:Glov_3703 hypothetical protein YP_004581051.1 PFAM: Major royal jelly-related; KEGG: cly:Celly_0376 major royal jelly protein YP_004581052.1 KEGG: cao:Celal_2698 haloacid dehalogenase, type II; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase YP_004581053.1 HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: cao:Celal_3242 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004581054.1 PFAM: PhoH-like protein; KEGG: cat:CA2559_08381 phosphate starvation-inducible PhoH-like protein YP_004581055.1 PFAM: Protein of unknown function DUF62; KEGG: gfo:GFO_1910 hypothetical protein YP_004581056.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gfo:GFO_1911 hypothetical protein YP_004581057.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: phe:Phep_0379 short-chain dehydrogenase/reductase SDR YP_004581058.1 KEGG: zpr:ZPR_1832 gliding motility protein GldG; TIGRFAM: Gliding-associated ABC transporter substrate-binding GldG; Gliding motility-associated ABC transporter permease GldF; PFAM: ABC-type uncharacterised transport system YP_004581059.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: fbc:FB2170_10186 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain YP_004581062.1 KEGG: fjo:Fjoh_1189 regulator of chromosome condensation, RCC1 YP_004581063.1 KEGG: cly:Celly_0719 hypothetical protein YP_004581064.1 KEGG: cly:Celly_0721 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region YP_004581065.1 PFAM: Signal transduction histidine kinase, internal region; Two component regulator three Y; Two component regulator propeller; KEGG: cly:Celly_0720 signal transduction histidine kinase LytS YP_004581066.1 KEGG: cat:CA2559_12573 tRNA modification GTPase YP_004581067.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: gfo:GFO_1271 YeeE/YedE domain-containing protein YP_004581068.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: cat:CA2559_12633 hypothetical protein YP_004581069.1 KEGG: coc:Coch_1464 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II YP_004581070.1 PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: coc:Coch_1463 cytochrome bd ubiquinol oxidase subunit I YP_004581071.1 KEGG: cao:Celal_0561 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004581072.1 PFAM: Protein of unknown function DUF81; KEGG: gfo:GFO_1266 membrane protein YP_004581073.1 PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; KEGG: fbc:FB2170_15003 Crp family transcriptional regulator YP_004581074.1 KEGG: cat:CA2559_12643 predicted phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_004581075.1 KEGG: cat:CA2559_08061 hypothetical protein; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF YP_004581076.1 KEGG: mtt:Ftrac_2442 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004581077.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: cao:Celal_1407 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004581078.1 KEGG: rbi:RB2501_14174 hypothetical protein YP_004581080.1 TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; PAS fold; PAS fold-3; GAF; Helix-turn-helix, Fis-type; KEGG: rbi:RB2501_14179 NifA subfamily, fis family transcriptional regulator; SMART: Signal transduction response regulator, receiver region; GAF; PAS; PAC motif; ATPase, AAA+ type, core YP_004581081.1 KEGG: dal:Dalk_1601 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004581082.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; PAS fold; KEGG: cyc:PCC7424_2021 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif YP_004581083.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: cly:Celly_3272 hypothetical protein YP_004581084.1 PFAM: Phospholipase A1; KEGG: cao:Celal_3085 phospholipase A1 YP_004581086.1 KEGG: cly:Celly_0955 hypothetical protein YP_004581090.1 manually curated; KEGG: fjo:Fjoh_3694 hypothetical protein YP_004581091.1 PFAM: Transposase IS3/IS911; KEGG: gfo:GFO_1387 transposase YP_004581092.1 KEGG: gfo:GFO_1388 integrase; manually curated; PFAM: Integrase, catalytic core YP_004581093.1 KEGG: fps:FP1243 peptidase YP_004581094.1 TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: fjo:Fjoh_2707 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related YP_004581095.1 PFAM: Peptidase S54, rhomboid; KEGG: cat:CA2559_13218 hypothetical protein YP_004581096.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: fjo:Fjoh_4503 lipid A biosynthesis acyltransferase YP_004581097.1 KEGG: fjo:Fjoh_2795 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004581098.1 KEGG: cat:CA2559_08836 phosphoglucomutase/phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004581099.1 PFAM: Acyl carrier protein phosphodiesterase; KEGG: cly:Celly_2815 acyl carrier protein phosphodiesterase YP_004581100.1 TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: cat:CA2559_08826 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase YP_004581101.1 KEGG: cao:Celal_3797 hypothetical protein YP_004581102.1 KEGG: cly:Celly_2783 hypothetical protein YP_004581103.1 KEGG: cly:Celly_3257 hypothetical protein YP_004581104.1 KEGG: cat:CA2559_10878 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like YP_004581105.1 KEGG: rbi:RB2501_03945 hypothetical protein YP_004581106.1 KEGG: cat:CA2559_10023 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730 YP_004581107.1 KEGG: zpr:ZPR_1731 metalloprotease YP_004581108.1 KEGG: fps:FP0719 pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component YP_004581109.1 KEGG: fjo:Fjoh_2016 hypothetical protein YP_004581110.1 KEGG: cly:Celly_3084 hypothetical protein YP_004581111.1 KEGG: rbi:RB2501_00666 arylesterase (aryl-ester hydrolase); PFAM: Alpha/beta hydrolase fold-1 YP_004581112.1 KEGG: mtt:Ftrac_3185 hypothetical protein YP_004581113.1 KEGG: cly:Celly_1503 hypothetical protein YP_004581114.1 KEGG: cly:Celly_2003 beta-lactamase domain-containing protein YP_004581115.1 KEGG: cat:CA2559_10413 proteinase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI YP_004581116.1 KEGG: gfo:GFO_2314 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta YP_004581117.1 PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: fjo:Fjoh_2919 hypothetical protein YP_004581118.1 PFAM: Glycosyl transferase, family 2; KEGG: cat:CA2559_12413 glycosyltransferase YP_004581119.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: fjo:Fjoh_2921 OmpA/MotB domain-containing protein YP_004581120.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: cat:CA2559_04385 di-heme cytochrome c peroxidase YP_004581121.1 KEGG: fps:FP0869 translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal YP_004581122.1 PFAM: Phospholipase/carboxylesterase; KEGG: cat:CA2559_11223 probable lipase YP_004581123.1 PFAM: DNA helicase, UvrD/REP type; KEGG: gfo:GFO_2323 PcrA-like UvrD/Rep family ATP-dependent DNA helicase YP_004581124.1 KEGG: psn:Pedsa_1951 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; Diverse 7TM receptor, transmembrane region; SMART: Transcription regulator LuxR, C-terminal YP_004581125.1 KEGG: cly:Celly_2768 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C YP_004581126.1 KEGG: fjo:Fjoh_2926 hypothetical protein YP_004581127.1 PFAM: Patatin; KEGG: gfo:GFO_2328 patatin-like phospholipase YP_004581128.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: cao:Celal_3764 peptidase M1 membrane alanine aminopeptidase YP_004581129.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: fbc:FB2170_12226 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004581130.1 PFAM: tRNA-hydroxylase; KEGG: cat:CA2559_09818 tRNA-hydroxylase YP_004581131.1 PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: mtt:Ftrac_0705 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_004581132.1 KEGG: cly:Celly_2250 hypothetical protein YP_004581139.1 KEGG: cpy:Cphy_3236 hypothetical protein YP_004581140.1 KEGG: cat:CA2559_00400 hypothetical protein YP_004581141.1 KEGG: cly:Celly_3224 hypothetical protein YP_004581144.1 KEGG: zpr:ZPR_1421 hypothetical protein; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004581147.1 KEGG: pdi:BDI_2714 glycosyl hydrolase YP_004581148.1 KEGG: pdi:BDI_2713 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004581149.1 PFAM: DNA methylase N-4/N-6; KEGG: pdi:BDI_2712 adenine-specific DNA methylase YP_004581150.1 PFAM: VirE N-terminal; KEGG: cly:Celly_3213 hypothetical protein YP_004581151.1 KEGG: cat:CA2559_00435 hypothetical protein YP_004581153.1 PFAM: Integrase, catalytic core, phage; KEGG: cat:CA2559_00445 tyrosine type site-specific recombinase YP_004581158.1 PFAM: Protein of unknown function DUF2136; KEGG: gfo:GFO_0923 hypothetical protein YP_004581159.1 KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004581160.1 PFAM: KWG Leptospira; KEGG: fba:FIC_02508 hypothetical protein YP_004581161.1 KEGG: aps:CFPG_201 hypothetical protein YP_004581162.1 KEGG: fjo:Fjoh_3650 hypothetical protein YP_004581163.1 PFAM: Protein of unknown function DUF2199; KEGG: nmn:NMCC_1608 hypothetical protein YP_004581164.1 PFAM: Transposase IS3/IS911; KEGG: gfo:GFO_1387 transposase YP_004581165.1 KEGG: gfo:GFO_1388 integrase; manually curated; PFAM: Integrase, catalytic core YP_004581167.1 KEGG: cly:Celly_1482 hypothetical protein YP_004581168.1 KEGG: fjo:Fjoh_1877 hypothetical protein YP_004581171.1 KEGG: hso:HS_0101 hypothetical protein YP_004581174.1 KEGG: cao:Celal_1456 hypothetical protein YP_004581175.1 PFAM: Transposase IS3/IS911; KEGG: gfo:GFO_1387 transposase YP_004581176.1 KEGG: gfo:GFO_1388 integrase; manually curated; PFAM: Integrase, catalytic core YP_004581178.1 KEGG: gfo:GFO_2357 hypothetical protein; TIGRFAM: addiction module antidote protein, CC2985; PFAM: addiction module antidote protein, CC2985 YP_004581179.1 PFAM: Plasmid stabilisation system; KEGG: gfo:GFO_2358 plasmid stabilization protein YP_004581180.1 KEGG: pjd:Pjdr2_4681 hypothetical protein YP_004581181.1 PFAM: Protein of unknown function DUF305; KEGG: zpr:ZPR_4065 hypothetical protein YP_004581182.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cly:Celly_2670 redoxin domain-containing protein YP_004581184.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: zpr:ZPR_1201 phenylalanyl-tRNA synthetase subunit beta YP_004581185.1 PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: cly:Celly_0371 phosphoesterase PA-phosphatase-like protein YP_004581186.1 KEGG: cao:Celal_1605 beta-ig-h3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain YP_004581187.1 KEGG: cly:Celly_0213 hypothetical protein YP_004581188.1 KEGG: zpr:ZPR_1229 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004581189.1 KEGG: fps:FP1047 hypothetical protein YP_004581190.1 TIGRFAM: Transaldolase C; HAMAP: transaldolase; KEGG: cao:Celal_3687 transaldolase; PFAM: Transaldolase YP_004581192.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cly:Celly_2664 3-oxoacyl-ACP reductase YP_004581193.1 PFAM: Glutamine cyclotransferase; KEGG: cat:CA2559_10783 glutamine cyclotransferase YP_004581194.1 PFAM: Thioesterase superfamily; KEGG: cly:Celly_2662 hypothetical protein YP_004581195.1 KEGG: cat:CA2559_10793 hypothetical protein YP_004581196.1 KEGG: cly:Celly_2656 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase YP_004581197.1 TIGRFAM: Fumarylacetoacetase; KEGG: cat:CA2559_09238 fumarylacetoacetase; PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like YP_004581198.1 KEGG: fbc:FB2170_13251 hypothetical protein YP_004581199.1 KEGG: cao:Celal_3673 cytosolic protein YP_004581200.1 KEGG: cao:Celal_0279 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004581201.1 TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; PAS fold-3; KEGG: cao:Celal_3642 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif YP_004581202.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: cat:CA2559_09888 heat shock ClpB protein; SMART: ATPase, AAA+ type, core YP_004581203.1 KEGG: cat:CA2559_11153 hypothetical protein YP_004581204.1 KEGG: gfo:GFO_1501 hypothetical protein YP_004581205.1 PFAM: Malate:quinone-oxidoreductase; TIGRFAM: Malate:quinone-oxidoreductase; KEGG: zpr:ZPR_1178 malate:quinone oxidoreductase; HAMAP: Malate:quinone-oxidoreductase YP_004581206.1 PFAM: Phosphoglycerate mutase; KEGG: cly:Celly_2650 phosphoglycerate mutase YP_004581207.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: fbc:FB2170_13286 SsrA-binding protein; PFAM: SsrA-binding protein YP_004581208.1 KEGG: gfo:GFO_2271 hypothetical protein YP_004581209.1 PFAM: Protein of unknown function DUF1648; KEGG: mtt:Ftrac_3142 hypothetical protein YP_004581210.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: zpr:ZPR_3227 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004581211.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: fbc:FB2170_13296 Gfo/Idh/MocA family oxidoreductase YP_004581212.1 KEGG: cat:CA2559_09528 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004581213.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: cly:Celly_3278 hypothetical protein YP_004581215.1 KEGG: fjo:Fjoh_3449 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal YP_004581216.1 KEGG: fjo:Fjoh_3451 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; manually curated; TIGRFAM: DNA polymerase III, epsilon subunit; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal YP_004581217.1 PFAM: Ion transport; KEGG: cao:Celal_4252 ion transport protein YP_004581218.1 PFAM: tRNA isopentenyltransferase; Isopentenyl transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: cat:CA2559_09503 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase YP_004581219.1 PFAM: Protein of unknown function DUF2254, membrane; KEGG: gfo:GFO_2295 hypothetical protein YP_004581220.1 KEGG: gfo:GFO_0658 two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004581221.1 KEGG: fbc:FB2170_13341 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004581222.1 TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: zpr:ZPR_3239 dephospho-CoA kinase YP_004581223.1 KEGG: cat:CA2559_09483 hypothetical protein YP_004581224.1 PFAM: Glycosyl transferase, family 2; KEGG: cao:Celal_4261 glycosyl transferase family 2 YP_004581225.1 PFAM: Fibronectin, type III; KEGG: fps:FP1830 hypothetical protein YP_004581226.1 KEGG: cat:CA2559_09468 enoyl-ACP reductase, NADH YP_004581227.1 KEGG: cly:Celly_3289 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal YP_004581228.1 KEGG: cat:CA2559_09458 hypothetical protein YP_004581229.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: fjo:Fjoh_3467 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein YP_004581230.1 KEGG: cat:CA2559_09448 hypothetical protein YP_004581231.1 TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: cat:CA2559_09443 lipoprotein protein YP_004581232.1 PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: cly:Celly_3294 dihydrodipicolinate synthase YP_004581233.1 KEGG: cly:Celly_3295 hypothetical protein YP_004581234.1 PFAM: 5'-Nucleotidase, C-terminal; KEGG: fbc:FB2170_13401 5'-nucleotidase/2',3'-cyclic phosphodiesterase YP_004581235.1 KEGG: gfo:GFO_0643 secreted or periplasmic 5'-nucleotidase; PFAM: Metallophosphoesterase YP_004581236.1 KEGG: lbf:LBF_2071 hypothetical protein YP_004581237.1 KEGG: fjo:Fjoh_3474 hypothetical protein YP_004581238.1 KEGG: fps:FP1846 hypothetical protein YP_004581239.1 KEGG: fbc:FB2170_13426 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; TIGRFAM: NAD-dependent DNA ligase; HAMAP: DNA ligase; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT YP_004581240.1 KEGG: fbc:FB2170_13431 protoporphyrinogen oxidase; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730 YP_004581241.1 KEGG: fbc:FB2170_13431 protoporphyrinogen oxidase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small YP_004581242.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fjo:Fjoh_5056 GCN5-related N-acetyltransferase YP_004581243.1 KEGG: fbc:FB2170_13443 hypothetical protein YP_004581244.1 TIGRFAM: Riboflavin biosynthesis protein RibD; KEGG: cat:CA2559_12713 riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal YP_004581245.1 KEGG: zpr:ZPR_3587 haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004581246.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: gfo:GFO_0633 hypothetical protein YP_004581247.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; KEGG: fps:FP2027 hypothetical protein YP_004581248.1 KEGG: fps:FP1207 hypothetical protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily