-- dump date 20140619_122116 -- class Genbank::CDS -- table cds_note -- id note YP_003587925.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bld:BLi00001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003587927.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: afl:Aflv_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_003587928.1 PFAM: RNA-binding S4 domain protein; KEGG: lbr:LVIS_0003 S4-like RNA-binding protein YP_003587929.1 KEGG: eat:EAT1b_1727 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_003587930.1 KEGG: cce:Ccel_0005 hypothetical protein YP_003587931.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: pjd:Pjdr2_0006 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003587932.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: aac:Aaci_0006 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003587933.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: gyc:GYMC61_0009 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_003587934.1 KEGG: hor:Hore_21160 peptidase S11 D-alanyl-D- alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003587935.1 KEGG: esi:Exig_1106 hypothetical protein YP_003587936.1 KEGG: bbe:BBR47_00160 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; Indole-3- glycerol phosphate synthase YP_003587937.1 PFAM: SNO glutamine amidotransferase; KEGG: aac:Aaci_0013 SNO glutamine amidotransferase YP_003587938.1 PFAM: SNARE associated Golgi protein; KEGG: aac:Aaci_1043 SNARE associated Golgi protein YP_003587939.1 PFAM: SNARE associated Golgi protein; KEGG: dhd:Dhaf_3002 SNARE associated Golgi protein YP_003587940.1 KEGG: gym:GYMC10_4281 phosphoesterase PA- phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003587941.1 KEGG: mgi:Mflv_3638 transporter DMT superfamily protein YP_003587942.1 PFAM: integrase family protein; KEGG: adg:Adeg_1994 integrase family protein YP_003587944.1 KEGG: hypothetical protein YP_003587945.1 KEGG: rha:RHA1_ro04572 hypothetical protein YP_003587947.1 KEGG: hypothetical protein YP_003587948.1 KEGG: tsi:TSIB_2042 IS element ISTsi1 orfA, putative resolvase YP_003587949.1 PFAM: cytochrome c oxidase subunit I; KEGG: afl:Aflv_1359 cytochrome c oxidase (b(o/a)3- type) chain I YP_003587950.1 PFAM: cytochrome c oxidase subunit II; KEGG: bbe:BBR47_04020 probable bo3-type cytochrome c oxidase YP_003587951.1 KEGG: bbe:BBR47_04010 hypothetical protein YP_003587952.1 KEGG: bbe:BBR47_34070 hypothetical protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003587953.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: swo:Swol_1663 ErfK/YbiS/YcfS/YnhG YP_003587954.1 KEGG: gym:GYMC10_5289 hypothetical protein YP_003587955.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gsu:GSU0065 cytidine/deoxycytidylate deaminase family protein YP_003587956.1 KEGG: bbe:BBR47_00630 probable two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003587957.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: pjd:Pjdr2_0144 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein YP_003587958.1 PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_0145 hypothetical protein YP_003587959.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: bbe:BBR47_00660 recombination protein RecR; SMART: Toprim sub domain protein YP_003587960.1 PFAM: Protein of unknown function DUF2508; KEGG: mta:Moth_0030 hypothetical protein YP_003587961.1 KEGG: aac:Aaci_1358 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein YP_003587962.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: hor:Hore_10260 3-oxoacyl-(acyl-carrier- protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein YP_003587963.1 PFAM: sigmaK-factor processing regulatory BofA; KEGG: bbe:BBR47_00700 sigma-K factor processing regulatory protein YP_003587964.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cyn:Cyan7425_5242 Orn/Lys/Arg decarboxylase major region YP_003587965.1 TIGRFAM: thymidylate kinase; KEGG: tro:trd_0201 thymidylate kinase; PFAM: thymidylate kinase YP_003587966.1 PFAM: protein of unknown function DUF970; KEGG: bcl:ABC0051 hypothetical protein YP_003587967.1 PFAM: protein of unknown function DUF327; KEGG: hmo:HM1_1253 hypothetical protein YP_003587968.1 KEGG: bbe:BBR47_00780 DNA polymerase III delta' subunit YP_003587969.1 PFAM: PSP1 domain protein; KEGG: pjd:Pjdr2_0017 PSP1 domain protein YP_003587970.1 PFAM: protein of unknown function DUF972; KEGG: gtn:GTNG_0026 DNA replication intiation control protein YabA YP_003587971.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bbe:BBR47_00830 hypothetical protein YP_003587972.1 KEGG: aac:Aaci_0127 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003587973.1 KEGG: pjd:Pjdr2_2273 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein YP_003587974.1 KEGG: mta:Moth_0049 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003587975.1 TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; KEGG: pjd:Pjdr2_0025 primase/topoisomerase like protein; SMART: Toprim sub domain protein YP_003587976.1 SMART: Ribosomal RNA adenine methylase transferase- like; TIGRFAM: dimethyladenosine transferase; KEGG: bbe:BBR47_00900 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase YP_003587977.1 PFAM: protein of unknown function DUF458; KEGG: aac:Aaci_0166 protein of unknown function DUF458 YP_003587978.1 PFAM: phosphoesterase RecJ domain protein; KEGG: mac:MA3851 phosphotransferase YP_003587979.1 KEGG: adg:Adeg_2109 glycosyl transferase family 2 YP_003587980.1 KEGG: aac:Aaci_0168 sporulation peptidase YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG YP_003587981.1 KEGG: gyc:GYMC61_1501 5-carboxymethyl-2- hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003587982.1 PFAM: protein of unknown function DUF1021; KEGG: gym:GYMC10_0029 protein of unknown function DUF1021 YP_003587983.1 KEGG: bay:RBAM_000540 SspF YP_003587984.1 TIGRFAM: cyanophycinase; KEGG: aac:Aaci_0172 cyanophycinase; PFAM: peptidase S51 dipeptidase E YP_003587985.1 KEGG: aac:Aaci_0173 cyanophycin synthetase; TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; ATP- dependent carboxylate-amine ligase domain protein ATP- grasp; cytoplasmic peptidoglycan synthetase domain protein YP_003587986.1 KEGG: lsp:Bsph_0065 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003587987.1 KEGG: sth:STH3245 hypothetical protein YP_003587988.1 KEGG: bbe:BBR47_00940 transcriptional repressor of purine operon; TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase YP_003587989.1 KEGG: rrs:RoseRS_2960 putative endoribonuclease L- PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_003587990.1 PFAM: SpoVG family protein; KEGG: cbf:CLI_3766 regulatory protein SpoVG YP_003587991.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: gwc:GWCH70_0045 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_003587992.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: bbe:BBR47_00990 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003587993.1 KEGG: pjd:Pjdr2_0036 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_003587994.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: chy:CHY_0196 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003587995.1 KEGG: pjd:Pjdr2_0038 hypothetical protein YP_003587996.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: aac:Aaci_0182 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_003587997.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: tte:TTE2564 parvulin-like peptidyl-prolyl isomerase YP_003587998.1 KEGG: aac:Aaci_0183 transcriptional regulator, AbrB family; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003587999.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003588000.1 PFAM: polysaccharide biosynthesis protein; KEGG: bbe:BBR47_01060 hypothetical protein YP_003588001.1 KEGG: xau:Xaut_4391 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_003588002.1 KEGG: aac:Aaci_0186 histone family protein DNA- binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003588003.1 KEGG: pth:PTH_0122 ribosome-associated heat shock protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003588004.1 PFAM: polysaccharide biosynthesis protein; KEGG: btk:BT9727_5107 oligosaccharide translocase YP_003588005.1 PFAM: O-antigen polymerase; KEGG: cce:Ccel_2933 O-antigen polymerase YP_003588006.1 KEGG: bha:BH0074 hypothetical protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein YP_003588007.1 PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: aac:Aaci_0189 spore cortex biosynthesis protein, YabQ-like protein YP_003588008.1 PFAM: Septum formation initiator; KEGG: afl:Aflv_0055 septum formation initiator YP_003588009.1 PFAM: RNA binding S1 domain protein; KEGG: aac:Aaci_0191 RNA binding S1 domain protein YP_003588010.1 PFAM: Protein of unknown function DUF2089; KEGG: sth:STH174 hypothetical protein YP_003588011.1 KEGG: bha:BH3593 hypothetical protein YP_003588012.1 KEGG: aac:Aaci_0193 hypothetical protein YP_003588013.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gym:GYMC10_1724 CMP/dCMP deaminase zinc- binding protein YP_003588014.1 SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: bbe:BBR47_01160 stage II sporulation protein E; PFAM: Stage II sporulation E family protein YP_003588015.1 PFAM: protein of unknown function DUF1212; KEGG: bbe:BBR47_01190 hypothetical protein YP_003588016.1 KEGG: dhd:Dhaf_0767 hypothetical protein YP_003588017.1 KEGG: pth:PTH_0197 ATPase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_003588018.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: aac:Aaci_0199 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003588019.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bbe:BBR47_01230 cell division protein FtsH homolog; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular YP_003588020.1 KEGG: hmo:HM1_0199 metal dependent phosphohydrolase domain protein, putative; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003588021.1 KEGG: gym:GYMC10_0057 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003588022.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: hmo:HM1_0664 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003588023.1 KEGG: pjd:Pjdr2_0071 putative transcriptional acitvator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003588024.1 PFAM: Hsp33 protein; KEGG: pjd:Pjdr2_0072 HSP33 protein YP_003588025.1 TIGRFAM: dihydropteroate synthase; KEGG: chy:CHY_2383 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003588026.1 TIGRFAM: dihydroneopterin aldolase; KEGG: aac:Aaci_0965 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003588027.1 TIGRFAM:2-amino-4-hydroxy-6- hydroxymethyldihydropter idinepyrophosphokinase; KEGG: tro:trd_1324 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003588028.1 KEGG: aac:Aaci_0207 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003588029.1 KEGG: aac:Aaci_2083 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_003588030.1 KEGG: hmo:HM1_0646 hypothetical protein YP_003588031.1 KEGG: pjd:Pjdr2_0083 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003588032.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: gyc:GYMC61_0075 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003588033.1 PFAM: thioesterase superfamily protein; KEGG: bha:BH2602 hypothetical protein YP_003588034.1 KEGG: aac:Aaci_1053 integrase catalytic region YP_003588035.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588036.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588037.1 KEGG: mta:Moth_1126 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003588038.1 KEGG: dau:Daud_1136 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003588039.1 KEGG: drm:Dred_0729 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588040.1 PFAM: regulatory protein TetR; KEGG: dra:DR_2376 TetR family transcriptional regulator YP_003588041.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: gym:GYMC10_5783 transcriptional repressor, CtsR YP_003588042.1 PFAM: UvrB/UvrC protein; KEGG: hor:Hore_00850 UvrB/UvrC protein YP_003588043.1 PFAM: ATP:guanido phosphotransferase; KEGG: aac:Aaci_2741 ATP:guanido phosphotransferase YP_003588044.1 KEGG: aac:Aaci_2740 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase YP_003588045.1 TIGRFAM: DNA repair protein RadA; PFAM: DnaB domain protein helicase domain protein; KEGG: gyc:GYMC61_0080 DNA repair protein RadA; SMART: AAA ATPase YP_003588046.1 PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; KEGG: pjd:Pjdr2_5712 protein of unknown function DUF147 YP_003588047.1 PFAM: transcription factor CarD; KEGG: aoe:Clos_0460 CarD family transcriptional regulator YP_003588048.1 KEGG: aac:Aaci_2736 PilT protein domain protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc YP_003588049.1 KEGG: bha:BH0107 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003588050.1 TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; KEGG: afl:Aflv_0081 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003588051.1 KEGG: bha:BH0109 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003588052.1 KEGG: bbe:BBR47_01970 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003588053.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gtn:GTNG_0085 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003588054.1 KEGG: aac:Aaci_2730 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003588055.1 PFAM: protein of unknown function DUF901; KEGG: lwe:lwe0205 hypothetical protein YP_003588056.1 KEGG: aac:Aaci_2728 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003588057.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588058.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588059.1 KEGG: dau:Daud_0208 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003588060.1 KEGG: bbe:BBR47_02040 preprotein translocase SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003588061.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: bbe:BBR47_02050 transcription antitermination protein; SMART: NGN domain protein; KOW domain protein YP_003588062.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: pjd:Pjdr2_5696 ribosomal protein L11; SMART: ribosomal protein L11 YP_003588063.1 KEGG: adg:Adeg_1928 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003588064.1 PFAM: ribosomal protein L10; KEGG: bbe:BBR47_02080 50S ribosomal protein L10 YP_003588065.1 KEGG: gym:GYMC10_5759 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_003588066.1 PFAM: methyltransferase small; KEGG: bbe:BBR47_02100 hypothetical protein YP_003588067.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: aac:Aaci_2719 DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_003588068.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: aac:Aaci_2718 DNA-directed RNA polymerase, beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_003588069.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: bha:BH0128 ribosomal protein L7AE family protein YP_003588070.1 KEGG: aac:Aaci_2716 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003588071.1 KEGG: afl:Aflv_0101 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003588072.1 KEGG: aac:Aaci_2714 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_003588073.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; KEGG: aac:Aaci_2713 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003588074.1 KEGG: pjd:Pjdr2_5681 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003588075.1 KEGG: aac:Aaci_2711 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003588076.1 PFAM: ribosomal protein L4/L1e; KEGG: gyc:GYMC61_0108 ribosomal protein L4/L1e YP_003588077.1 PFAM: Ribosomal protein L25/L23; KEGG: bha:BH0136 50S ribosomal protein L23 YP_003588078.1 KEGG: aac:Aaci_2708 ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003588079.1 KEGG: aac:Aaci_2707 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003588080.1 KEGG: gwc:GWCH70_0116 ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003588081.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: aac:Aaci_2705 ribosomal protein S3; SMART: KH domain protein YP_003588082.1 KEGG: aac:Aaci_2704 ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_003588083.1 KEGG: aac:Aaci_2703 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003588084.1 KEGG: aac:Aaci_2702 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003588085.1 KEGG: aac:Aaci_2701 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003588086.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: aac:Aaci_2700 ribosomal protein L24; SMART: KOW domain protein YP_003588087.1 PFAM: ribosomal protein L5; KEGG: aac:Aaci_2699 ribosomal protein L5 YP_003588088.1 PFAM: ribosomal protein S14; KEGG: aac:Aaci_2698 ribosomal protein S14 YP_003588089.1 PFAM: ribosomal protein S8; KEGG: pth:PTH_0333 30S ribosomal protein S8 YP_003588090.1 KEGG: aac:Aaci_2696 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_003588091.1 KEGG: chy:CHY_2293 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003588092.1 KEGG: pjd:Pjdr2_5663 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_003588093.1 KEGG: gyc:GYMC61_0125 ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003588094.1 KEGG: bha:BH0153 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003588095.1 KEGG: pjd:Pjdr2_5660 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003588096.1 KEGG: gwc:GWCH70_0132 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_003588097.1 KEGG: gwc:GWCH70_0133 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003588098.1 KEGG: aac:Aaci_2689 hypothetical protein YP_003588099.1 KEGG: aac:Aaci_2688 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003588100.1 KEGG: bha:BH0159 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_003588101.1 KEGG: hmo:HM1_1404 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003588102.1 KEGG: bbe:BBR47_02470 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003588103.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: aac:Aaci_2684 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003588104.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: pjd:Pjdr2_5652 DNA-directed RNA polymerase, alpha subunit; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003588105.1 KEGG: gym:GYMC10_5719 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003588106.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: aac:Aaci_2681 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003588107.1 KEGG: aac:Aaci_2680 ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003588108.1 PFAM: ribosomal protein S9; KEGG: aac:Aaci_2679 ribosomal protein S9 YP_003588109.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: aac:Aaci_2676 ATPase-like, ParA/MinD YP_003588110.1 KEGG: bha:BH0241 spore germination protein YP_003588111.1 KEGG: bbe:BBR47_02590 KinB signaling pathway activation protein YP_003588112.1 PFAM: polysaccharide deacetylase; KEGG: aac:Aaci_2674 polysaccharide deacetylase family sporulation protein PdaB YP_003588113.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: bbe:BBR47_02610 hypothetical protein YP_003588114.1 KEGG: aac:Aaci_0321 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003588115.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; KEGG: sth:STH1142 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003588116.1 PFAM: protein of unknown function DUF81; KEGG: azo:azo0433 hypothetical protein YP_003588117.1 TIGRFAM: sulfate adenylyltransferase; KEGG: gtn:GTNG_0387 sulfate adenylyltransferase; PFAM: ATP-sulfurylase YP_003588118.1 PFAM: protein of unknown function DUF147; KEGG: aac:Aaci_2672 protein of unknown function DUF147 YP_003588119.1 PFAM: YbbR family protein; KEGG: tte:TTE2207 hypothetical protein YP_003588120.1 TIGRFAM: phosphoglucosamine mutase; KEGG: aac:Aaci_2670 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003588121.1 KEGG: aac:Aaci_2669 glucosamine/fructose-6- phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_003588122.1 PFAM: AzlC family protein; KEGG: aac:Aaci_3065 AzlC family protein YP_003588123.1 PFAM: branched-chain amino acid transport; KEGG: tpd:Teth39_1954 branched-chain amino acid transport YP_003588124.1 KEGG: bha:BH2909 hypothetical protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_003588125.1 PFAM: heat shock protein Hsp20; KEGG: saf:SULAZ_1145 small heat shock protein YP_003588126.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: pth:PTH_2703 transposase and inactivated derivatives YP_003588128.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; SH3 type 3 domain protein; KEGG: dau:Daud_2095 cell envelope-related transcriptional attenuator; SMART: SH3 domain protein YP_003588129.1 KEGG: gwc:GWCH70_0735 hypothetical protein YP_003588130.1 KEGG: aac:Aaci_0390 beta-lactamase domain protein YP_003588131.1 KEGG: spe:Spro_3665 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003588132.1 KEGG: adg:Adeg_1759 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003588133.1 KEGG: aac:Aaci_0356 outer membrane lipoprotein- sorting protein-like protein YP_003588134.1 KEGG: pjd:Pjdr2_3840 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003588135.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: gym:GYMC10_5263 putative transcriptional regulator, CopG family YP_003588136.1 PFAM: PemK family protein; KEGG: bbe:BBR47_05000 endoribonuclease EndoA YP_003588137.1 TIGRFAM: adenosylhomocysteinase; KEGG: dsy:DSY1889 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase YP_003588138.1 PFAM: peptidase C26; KEGG: drm:Dred_2893 peptidase C26 YP_003588139.1 PFAM: protein of unknown function DUF1659; KEGG: hmo:HM1_3063 hypothetical protein YP_003588140.1 KEGG: dau:Daud_1667 hypothetical protein YP_003588141.1 KEGG: adg:Adeg_1144 putative cytoplasmic protein YP_003588142.1 PFAM: SNARE associated Golgi protein; KEGG: aac:Aaci_0366 SNARE associated Golgi protein YP_003588143.1 KEGG: aac:Aaci_3081 hypothetical protein YP_003588144.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aoe:Clos_2169 hypothetical protein YP_003588145.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: aac:Aaci_0368 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003588146.1 PFAM: protein of unknown function UPF0079; KEGG: drm:Dred_2888 hypothetical protein YP_003588147.1 PFAM: peptidase M22 glycoprotease; KEGG: gtn:GTNG_0212 glycoprotein endopeptidase YP_003588148.1 KEGG: afl:Aflv_0205 acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003588149.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: bha:BH0548 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_003588150.1 KEGG: pjd:Pjdr2_1036 5-formyltetrahydrofolate cyclo- ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003588151.1 KEGG: gym:GYMC10_2884 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003588152.1 PFAM: Chaperonin Cpn10; KEGG: aac:Aaci_0379 chaperonin Cpn10 YP_003588153.1 KEGG: aac:Aaci_0380 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003588154.1 PFAM: thioesterase superfamily protein; KEGG: gtn:GTNG_1412 ComA operon protein 2 YP_003588156.1 KEGG: dhd:Dhaf_2112 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003588157.1 KEGG: lsp:Bsph_3449 protein CbiM; TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein YP_003588158.1 PFAM: Cobalt transport protein CbiN; KEGG: cno:NT01CX_1330 cobalt transport protein CbiN YP_003588159.1 KEGG: dae:Dtox_3734 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein YP_003588160.1 TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: mta:Moth_1219 cobalt transport protein ATP- binding subunit; SMART: AAA ATPase YP_003588161.1 KEGG: lsp:Bsph_2918 putative cob(II)yrinic acid a,c- diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_003588162.1 PFAM: copper amine oxidase domain protein; KEGG: dau:Daud_0712 copper amine oxidase domain- containing protein YP_003588163.1 KEGG: pjd:Pjdr2_5471 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003588164.1 PFAM: protein of unknown function DUF1648; KEGG: pth:PTH_1499 integral membrane protein YP_003588165.1 KEGG: aac:Aaci_1243 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003588166.1 KEGG: aac:Aaci_1244 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588167.1 KEGG: rpf:Rpic12D_0620 hypothetical protein YP_003588168.1 KEGG: bwe:BcerKBAB4_0963 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588169.1 KEGG: dhd:Dhaf_2497 ABC transporter EcsB YP_003588170.1 KEGG: aac:Aaci_0046 hypothetical protein YP_003588172.1 KEGG: chl:Chy400_1558 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003588173.1 KEGG: aac:Aaci_1827 phosphoesterase; PFAM: phosphoesterase YP_003588174.1 KEGG: gym:GYMC10_3598 export-related chaperone CsaA YP_003588175.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bwe:BcerKBAB4_2394 cupin 2 domain-containing protein YP_003588176.1 PFAM: aldo/keto reductase; KEGG: gym:GYMC10_1159 aldo/keto reductase YP_003588177.1 KEGG: adg:Adeg_1218 hypothetical protein YP_003588178.1 PFAM: Peptidase M23; KEGG: mta:Moth_0246 peptidase M23B YP_003588179.1 KEGG: rca:Rcas_0210 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase YP_003588180.1 PFAM: protein of unknown function DUF58; KEGG: bbe:BBR47_05290 hypothetical protein YP_003588181.1 KEGG: bbe:BBR47_05300 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein YP_003588182.1 KEGG: bha:BH0607 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_003588183.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: gym:GYMC10_0908 xanthine/uracil/vitamin C permease YP_003588184.1 KEGG: btk:BT9727_3950 hypothetical protein YP_003588185.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis- type; KEGG: gyc:GYMC61_2756 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_003588186.1 KEGG: tro:trd_0528 putative agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003588187.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gyc:GYMC61_2759 permease for cytosine/purines uracil thiamine allantoin YP_003588188.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gyc:GYMC61_2760 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003588189.1 PFAM: cyclase family protein; KEGG: gyc:GYMC61_2761 cyclase family protein YP_003588190.1 PFAM: cytochrome c class I; KEGG: bbe:BBR47_48160 hypothetical protein YP_003588191.1 PFAM: cytochrome c class I; KEGG: bbe:BBR47_48160 hypothetical protein YP_003588192.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: adg:Adeg_0970 transcriptional regulator-like protein YP_003588193.1 KEGG: hypothetical protein YP_003588194.1 KEGG: gym:GYMC10_5592 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003588195.1 KEGG: gym:GYMC10_5591 hypothetical protein YP_003588196.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; KEGG: dae:Dtox_2781 resolvase domain protein; SMART: regulatory protein MerR YP_003588197.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: adg:Adeg_1869 transposase, IS605 OrfB family YP_003588198.1 KEGG: gym:GYMC10_5590 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588199.1 KEGG: bbe:BBR47_12270 hypothetical protein YP_003588200.1 PFAM: sodium/hydrogen exchanger; KEGG: geo:Geob_2411 sodium/hydrogen exchanger YP_003588201.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: bha:BH3873 acetolactate synthase large subunit YP_003588202.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; GAF domain protein; histidine kinase A domain protein; KEGG: bcq:BCQ_0385 sensor histidine kinase (sporulation kinase), C-terminal region; SMART: ATP-binding region ATPase domain protein; GAF domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_003588203.1 KEGG: aac:Aaci_1122 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003588204.1 KEGG: pjd:Pjdr2_3010 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003588205.1 KEGG: pjd:Pjdr2_3011 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003588206.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: gwc:GWCH70_1696 multicopper oxidase type 3 YP_003588207.1 KEGG: gyc:GYMC61_2543 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid- binding ACT domain protein YP_003588208.1 TIGRFAM: asparagine synthase (glutamine- hydrolyzing); KEGG: mta:Moth_1299 asparagine synthase, glutamine- hydrolyzing; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003588209.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: sus:Acid_0168 hypothetical protein YP_003588210.1 KEGG: drm:Dred_1361 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003588211.1 KEGG: sth:STH907 RNA polymerase factor sigma C; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003588212.1 KEGG: mva:Mvan_3021 FHA domain-containing protein YP_003588213.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; KEGG: geo:Geob_0148 PAS modulated sigma54 specific transcriptional regulator, Fis family; SMART: AAA ATPase; PAS domain containing protein; CBS domain containing protein YP_003588214.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: afl:Aflv_0181 acetyl-CoA carboxylase biotin carboxylase subunit YP_003588215.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sth:STH1572 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_003588216.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbe:BBR47_50040 probable enoyl-CoA hydratase YP_003588217.1 KEGG: mes:Meso_2734 peptidoglycan binding domain- containing protein YP_003588218.1 KEGG: gyc:GYMC61_1675 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003588219.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbe:BBR47_08800 hypothetical protein YP_003588220.1 PFAM: conserved hypothetical protein; KEGG: gvi:glr0491 hypothetical protein YP_003588221.1 PFAM: glutaredoxin; KEGG: gka:GK2075 glutaredoxin YP_003588222.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: sth:STH2848 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003588223.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase YP_003588224.1 KEGG: aac:Aaci_2501 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein YP_003588225.1 KEGG: lmh:LMHCC_1592 putative haloacid dehalogenase- like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003588226.1 KEGG: bbe:BBR47_31800 hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein YP_003588227.1 TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; KEGG: bbe:BBR47_32980 pyruvate dehydrogenase E1 component alpha subunit; PFAM: dehydrogenase E1 component YP_003588228.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bbe:BBR47_32970 pyruvate dehydrogenase E1 component beta subunit YP_003588229.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: aac:Aaci_0455 catalytic domain of components of various dehydrogenase complexes YP_003588230.1 KEGG: bbe:BBR47_32950 dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003588231.1 PFAM: AMP-dependent synthetase and ligase; KEGG: fal:FRAAL5278 putative crotonobetaine/carnitine-CoA ligase YP_003588232.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis- type; KEGG: bbe:BBR47_27550 putative transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003588233.1 PFAM: General substrate transporter; KEGG: gtn:GTNG_0806 putative transport protein YP_003588234.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cno:NT01CX_2116 diaminopimelate decarboxylase YP_003588235.1 KEGG: sth:STH355 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003588236.1 PFAM: protein of unknown function DUF156; KEGG: aac:Aaci_2639 protein of unknown function DUF156 YP_003588237.1 PFAM: protein of unknown function DUF302; KEGG: gka:GK2063 hypothetical protein YP_003588238.1 PFAM: Methyltransferase type 11; KEGG: aac:Aaci_0758 methyltransferase type 11 YP_003588239.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gwc:GWCH70_1890 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003588240.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aac:Aaci_1109 cytochrome c biogenesis protein transmembrane region YP_003588241.1 PFAM: alpha/beta hydrolase fold; KEGG: npu:Npun_R6557 alpha/beta hydrolase fold protein YP_003588242.1 PFAM: Citrate transporter; KEGG: bbe:BBR47_24210 hypothetical protein YP_003588243.1 PFAM: Citrate transporter; KEGG: bbe:BBR47_24210 hypothetical protein YP_003588244.1 KEGG: bbe:BBR47_22030 5-methyltetrahydrofolate-- homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12- binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_003588245.1 KEGG: pla:Plav_0004 DNA polymerase III subunit beta YP_003588246.1 PFAM: cytochrome oxidase assembly; KEGG: aac:Aaci_0510 uncharacterized protein required for cytochrome oxidase assembly-like protein YP_003588247.1 KEGG: bbe:BBR47_49810 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003588248.1 KEGG: bce:BC2464 S-layer protein / peptidoglycan endo-beta-N-acetylglucosaminidase; PFAM: SH3 type 3 domain protein; Mannosyl- glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; SH3 domain protein YP_003588249.1 KEGG: cyt:cce_3657 hypothetical protein YP_003588250.1 KEGG: gyc:GYMC61_1380 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase YP_003588251.1 KEGG: pjd:Pjdr2_4874 toprim domain protein YP_003588252.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: gwc:GWCH70_1466 glycoside hydrolase family 2 sugar binding YP_003588253.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sen:SACE_4163 zinc-binding dehydrogenase YP_003588254.1 PFAM: aldo/keto reductase; KEGG: aac:Aaci_2071 aldo/keto reductase YP_003588255.1 PFAM: protein of unknown function DUF820; KEGG: dae:Dtox_3061 protein of unknown function DUF820 YP_003588256.1 PFAM: glycosyl transferase group 1; KEGG: pth:PTH_0617 glycosyltransferase YP_003588257.1 PFAM: sucrose-6F-phosphate phosphohydrolase; KEGG: rba:RB5197 sucrose-phosphate synthase 1 YP_003588258.1 KEGG: mta:Moth_1689 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH YP_003588259.1 KEGG: rxy:Rxyl_1117 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588260.1 PFAM: ABC-2 type transporter; KEGG: rxy:Rxyl_1116 ABC-2 type transporter YP_003588261.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gtn:GTNG_1355 hypothetical protein YP_003588262.1 PFAM: amidohydrolase 2; KEGG: bpl:BURPS1106A_A2788 amidohydrolase family protein YP_003588263.1 KEGG: bha:BH1933 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003588264.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003588265.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A2770 acyl-CoA transferase/carnitine dehydratase YP_003588266.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aac:Aaci_1850 acyl-CoA dehydrogenase domain protein YP_003588267.1 KEGG: eic:NT01EI_3641 hypothetical protein YP_003588268.1 PFAM: nuclear export factor GLE1; KEGG: lmh:LMHCC_0499 hypothetical protein YP_003588269.1 PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: bwe:BcerKBAB4_1786 copper resistance D domain- containing protein YP_003588270.1 KEGG: afo:Afer_0055 hypothetical protein YP_003588271.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003588272.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003588273.1 KEGG: cbg:CbuG_0193 hypothetical protein YP_003588274.1 KEGG: mea:Mex_2p0680 hypothetical protein YP_003588275.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: bbe:BBR47_13500 probable thioredoxin reductase YP_003588276.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: gym:GYMC10_5135 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003588277.1 PFAM: putative transposase YhgA family protein; KEGG: aac:Aaci_2951 hypothetical protein YP_003588278.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: aac:Aaci_2082 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_003588279.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: tro:trd_A0771 biotin carboxyl carrier protein of acetyl-coa carboxylase (BccP) YP_003588280.1 PFAM: LamB/YcsF family protein; KEGG: dac:Daci_0005 hypothetical protein YP_003588281.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: bpl:BURPS1106A_A0270 biotin-dependent carboxylase domain-containing protein; PFAM: Allophanate hydrolase subunit 2 YP_003588282.1 KEGG: bur:Bcep18194_A6283 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_003588284.1 TIGRFAM: 4-aminobutyrate aminotransferase; KEGG: bbe:BBR47_57540 probable 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_003588285.1 KEGG: bha:BH0995 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003588286.1 PFAM: MaoC domain protein dehydratase; KEGG: aac:Aaci_0161 MaoC domain protein dehydratase YP_003588287.1 KEGG: ade:Adeh_4038 MaoC-like dehydratase YP_003588288.1 KEGG: aac:Aaci_0212 undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA YP_003588289.1 KEGG: aci:ACIAD0754 hypothetical protein YP_003588290.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: pjd:Pjdr2_1019 protein of unknown function DUF161 YP_003588291.1 KEGG: aac:Aaci_0646 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003588292.1 KEGG: nth:Nther_0997 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588293.1 KEGG: rpd:RPD_4207 hypothetical protein YP_003588295.1 PFAM: aminodeoxychorismate lyase; KEGG: shi:Shel_07820 conserved hypothetical protein TIGR00247 YP_003588296.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bcz:BCZK4601 xanthine/uracil permease family protein YP_003588297.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tte:TTE0993 glycerophosphoryl diester phosphodiesterase YP_003588298.1 PFAM: ABC-1 domain protein; aminoglycoside phosphotransferase; KEGG: gka:GK1754 ABC transporter YP_003588299.1 KEGG: sth:STH3215 putative glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003588300.1 PFAM: PilT protein domain protein; KEGG: syf:Synpcc7942_1203 hypothetical protein YP_003588301.1 KEGG: sfu:Sfum_1406 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003588302.1 KEGG: aac:Aaci_0317 hypothetical protein YP_003588303.1 KEGG: mem:Memar_0788 hypothetical protein YP_003588304.1 KEGG: ace:Acel_0811 hypothetical protein YP_003588305.1 PFAM: transposase IS3/IS911 family protein; KEGG: pth:PTH_2416 hypothetical protein YP_003588306.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pth:PTH_0715 hypothetical protein YP_003588307.1 PFAM: PglZ domain protein; KEGG: pth:PTH_0717 hypothetical protein YP_003588308.1 KEGG: cag:Cagg_1125 conserved protein, VrlQ family YP_003588309.1 KEGG: drm:Dred_2903 transposase, IS4 family protein YP_003588310.1 KEGG: aac:Aaci_1858 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003588311.1 PFAM: protein of unknown function DUF255; KEGG: chy:CHY_1723 hypothetical protein YP_003588312.1 PFAM: high-affinity nickel-transporter; KEGG: rxy:Rxyl_0110 high-affinity nickel- transporter YP_003588313.1 PFAM: RelA/SpoT domain protein; KEGG: amt:Amet_3678 RelA/SpoT domain-containing protein YP_003588314.1 KEGG: bbe:BBR47_16260 hypothetical protein; PFAM: Radical SAM domain protein; cobalamin B12- binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003588315.1 PFAM: protein of unknown function DUF16; KEGG: tro:trd_A0398 hypothetical protein YP_003588316.1 KEGG: gwc:GWCH70_1552 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_003588317.1 KEGG: gwc:GWCH70_1553 precorrin-8X methylmutase CbiC/CobH; PFAM: Precorrin-8X methylmutase CbiC/CobH YP_003588318.1 KEGG: gyc:GYMC61_2612 cobalamin biosynthesis protein CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_003588319.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; KEGG: gyc:GYMC61_2611 precorrin-6y C5,15- methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 12 YP_003588320.1 KEGG: bbe:BBR47_12510 cobalt-precorrin-2 C(20)- methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003588321.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: gwc:GWCH70_1557 precorrin-4 C11- methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003588322.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: gyc:GYMC61_2608 cobalamin (vitamin B12) biosynthesis CbiG protein YP_003588323.1 KEGG: bbe:BBR47_12540 cobyrinic acid A,C-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase YP_003588324.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gka:GK1804 hypothetical protein YP_003588325.1 KEGG: afl:Aflv_2180 precorrin-3B methylase CobJ fused to 4Fe-4S reductase domain; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003588326.1 TIGRFAM:nicotinate- nucleotide/dimethylbenzimidazolep hosphoribosyltransferase; KEGG: cag:Cagg_1277 nicotinate- nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003588327.1 KEGG: pjd:Pjdr2_3625 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase YP_003588328.1 PFAM: protein of unknown function DUF105; cobalbumin biosynthesis protein; KEGG: pth:PTH_1477 hypothetical protein YP_003588329.1 KEGG: mta:Moth_1099 adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003588330.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mta:Moth_1102 cobalamin-5'-phosphate synthase YP_003588331.1 KEGG: mta:Moth_1104 L-threonine O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_003588332.1 PFAM: isochorismatase hydrolase; KEGG: dae:Dtox_2831 isochorismatase hydrolase YP_003588333.1 PFAM: cobalt transport protein; KEGG: sth:STH3043 cobalt ABC transporter permease protein YP_003588334.1 KEGG: tpe:Tpen_1105 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588335.1 PFAM: BioY protein; KEGG: cby:CLM_1052 BioY family protein YP_003588336.1 PFAM: cytochrome c oxidase subunit IIa; KEGG: bbe:BBR47_04010 hypothetical protein YP_003588337.1 PFAM: cytochrome c oxidase subunit II; KEGG: bbe:BBR47_04020 probable bo3-type cytochrome c oxidase YP_003588338.1 PFAM: cytochrome c oxidase subunit I; KEGG: bbe:BBR47_04030 probable bo3-type cytochrome c oxidase YP_003588339.1 PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: gwc:GWCH70_2628 transcriptional regulator, TetR family YP_003588340.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: bbe:BBR47_16700 electron transfer flavoprotein beta subunit YP_003588341.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bsu:BSU28520 electron transfer flavoprotein (alpha subunit) YP_003588342.1 KEGG: afl:Aflv_1437 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003588343.1 KEGG: chl:Chy400_3562 major facilitator superfamily MFS_1 YP_003588344.1 KEGG: bbe:BBR47_50110 cytochrome c oxidase polypeptide II precursor; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I YP_003588345.1 TIGRFAM: cytochrome c oxidase, subunit I; KEGG: bbe:BBR47_50100 cytochrome c oxidase polypeptide I; PFAM: cytochrome c oxidase subunit I YP_003588346.1 KEGG: gym:GYMC10_0738 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit III YP_003588347.1 PFAM: cytochrome C oxidase subunit IV; KEGG: mcl:MCCL_0735 hypothetical protein YP_003588348.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bbe:BBR47_49830 cytochrome aa3 biosynthesis CtaG protein YP_003588349.1 PFAM: OsmC family protein; KEGG: esi:Exig_1196 OsmC family protein YP_003588350.1 PFAM: aldo/keto reductase; KEGG: rxy:Rxyl_0748 aldo/keto reductase YP_003588351.1 KEGG: aac:Aaci_0460 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_003588352.1 KEGG: bha:BH1031 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444 YP_003588353.1 PFAM: SpoVR family protein; KEGG: gwc:GWCH70_0551 SpoVR family protein YP_003588354.1 PFAM: protein of unknown function DUF59; KEGG: gyc:GYMC61_1551 protein of unknown function DUF59 YP_003588355.1 KEGG: gtn:GTNG_0639 hypothetical protein YP_003588356.1 KEGG: rhi:NGR_c09920 putative universal stress protein YP_003588357.1 PFAM: Protein of unknown function DUF2249; KEGG: bpr:GBP346_A2889 hypothetical protein YP_003588358.1 KEGG: saz:Sama_1275 anaerobic ribonucleoside triphosphate reductase YP_003588359.1 PFAM: ATP-cone domain protein; KEGG: aac:Aaci_1887 ATP-cone domain protein YP_003588360.1 SMART: Hedgehog/intein hint domain protein; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: aac:Aaci_1886 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit YP_003588361.1 KEGG: bbe:BBR47_21210 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003588362.1 KEGG: bbe:BBR47_30820 hypothetical protein YP_003588363.1 KEGG: aac:Aaci_0460 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_003588364.1 KEGG: bbe:BBR47_10830 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444 YP_003588365.1 PFAM: SpoVR family protein; KEGG: bpu:BPUM_0895 stage V sporulation protein R YP_003588366.1 PFAM: Fmu (Sun) domain protein; KEGG: adg:Adeg_1267 Fmu (Sun) domain protein YP_003588367.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: aac:Aaci_0997 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003588368.1 KEGG: bpd:BURPS668_A1408 serine protease YP_003588369.1 KEGG: aac:Aaci_2372 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003588370.1 PFAM: Radical SAM domain protein; KEGG: cth:Cthe_3107 radical SAM family protein YP_003588371.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: aac:Aaci_1949 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_003588372.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pjd:Pjdr2_4374 UBA/ThiF-type NAD/FAD binding protein YP_003588373.1 PFAM: arsenate reductase and related; KEGG: gwc:GWCH70_2934 arsenate reductase and related YP_003588374.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gyc:GYMC61_0434 ferredoxin (4Fe-4S) YP_003588375.1 KEGG: gtn:GTNG_2733 MalA gene products, putative; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_003588376.1 PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi03697 hypothetical protein YP_003588377.1 PFAM: peptidase M24; creatinase; KEGG: cte:CT2145 peptidase, M24 family protein YP_003588378.1 PFAM: Auxin Efflux Carrier; KEGG: bbe:BBR47_46930 hypothetical protein YP_003588379.1 KEGG: chy:CHY_0434 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003588380.1 KEGG: tsi:TSIB_1401 lysine/arginine/ornithine transport system kinase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein YP_003588381.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: tte:TTE1217 methylmalonyl-CoA mutase N- terminal domain-containing protein; PFAM: methylmalonyl-CoA mutase YP_003588382.1 PFAM: cobalamin B12-binding domain protein; KEGG: pth:PTH_1362 methylmalonyl-CoA mutase C- terminal domain-containing protein YP_003588383.1 KEGG: aoe:Clos_0089 short-chain dehydrogenase/reductase SDR; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003588384.1 KEGG: rsk:RSKD131_3114 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003588385.1 KEGG: pth:PTH_0653 Zn-dependent hydrolases, including glyoxylases YP_003588386.1 KEGG: adg:Adeg_1565 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_003588387.1 PFAM: Protein of unknown function DUF1802; KEGG: bbe:BBR47_15290 hypothetical protein YP_003588388.1 KEGG: aac:Aaci_1628 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003588389.1 PFAM: protein of unknown function DUF218; KEGG: aac:Aaci_1976 protein of unknown function DUF218 YP_003588390.1 PFAM: Protein of unknown function YwhD; KEGG: aac:Aaci_1038 hypothetical protein YP_003588391.1 KEGG: sth:STH3269 arginine/lysine/ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_003588392.1 PFAM: GerA spore germination protein; KEGG: aac:Aaci_0438 GerA spore germination protein YP_003588393.1 KEGG: aac:Aaci_0439 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003588394.1 TIGRFAM: germination protein, Ger(x)C family; KEGG: aac:Aaci_1265 germination protein, Ger(X)C family YP_003588395.1 KEGG: sth:STH2455 hypothetical protein YP_003588396.1 PFAM: protein of unknown function DUF204; KEGG: pjd:Pjdr2_3694 protein of unknown function DUF204 YP_003588397.1 KEGG: aac:Aaci_1042 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003588398.1 PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_20870 hypothetical protein YP_003588399.1 PFAM: Domain of unknown function DUF1805; KEGG: bbe:BBR47_48340 hypothetical protein YP_003588400.1 KEGG: gwc:GWCH70_2655 cellulase; PFAM: peptidase M42 family protein YP_003588401.1 KEGG: phosphatidylinositol kinase domain protein YP_003588402.1 PFAM: alanine racemase domain protein; KEGG: tro:trd_1182 alanine racemase, N-terminal domain family YP_003588403.1 KEGG: pjd:Pjdr2_3372 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003588404.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; KEGG: gtn:GTNG_1155 pyruvate ferredoxin oxidoreductase, alpha subunit,putative YP_003588405.1 KEGG: nth:Nther_1480 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003588406.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003588408.1 TIGRFAM: seryl-tRNA synthetase; KEGG: pjd:Pjdr2_6148 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like YP_003588409.1 KEGG: gyc:GYMC61_1415 glycine oxidase ThiO; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase YP_003588410.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: rxy:Rxyl_2395 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003588412.1 PFAM: protein of unknown function DUF86; KEGG: aac:Aaci_1048 protein of unknown function DUF86 YP_003588414.1 PFAM: polysaccharide deacetylase; KEGG: pth:PTH_1880 hypothetical protein YP_003588415.1 PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; KEGG: hmo:HM1_2271 1,2-diacylglycerol 3- glucosyltransferase, putative YP_003588416.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: llc:LACR_1083 hypothetical protein YP_003588417.1 KEGG: hoh:Hoch_0512 beta-lactamase domain protein YP_003588418.1 KEGG: gtn:GTNG_2190 hypothetical protein; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003588419.1 KEGG: afl:Aflv_2418 predicted sugar phosphatase of the HAD superfamily; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003588420.1 KEGG: bha:BH1185 transcriptional regulator HPr; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003588421.1 KEGG: rpb:RPB_1599 histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003588422.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: rmr:Rmar_0748 fumarate lyase YP_003588423.1 KEGG: similar to conserved hypothetical protein YP_003588424.1 KEGG: sth:STH2741 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003588425.1 KEGG: rpe:RPE_2872 major facilitator transporter YP_003588426.1 KEGG: pth:PTH_0209 thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003588427.1 KEGG: hau:Haur_0337 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003588428.1 PFAM: oxidoreductase molybdopterin binding; KEGG: pjd:Pjdr2_4317 oxidoreductase molybdopterin binding YP_003588429.1 PFAM: AIG2 family protein; KEGG: gwc:GWCH70_1816 AIG2 family protein YP_003588430.1 PFAM: DoxX family protein; KEGG: tro:trd_1359 DoxX subfamily YP_003588431.1 KEGG: bbe:BBR47_12250 probable ABC transporter substrate binding protein YP_003588432.1 KEGG: gwc:GWCH70_1214 lipoprotein YP_003588433.1 KEGG: bbe:BBR47_12230 hypothetical protein YP_003588434.1 KEGG: bbe:BBR47_12220 probable ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588435.1 KEGG: phe:Phep_2955 40-residue YVTN family beta- propeller repeat protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; NHL repeat containing protein YP_003588436.1 PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_4963 polysaccharide deacetylase YP_003588437.1 KEGG: aac:Aaci_1457 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003588438.1 PFAM: regulatory protein MerR; Resolvase domain; KEGG: min:Minf_2376 transposon IS605 OrfA, integrase-resolvase YP_003588439.1 PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: tko:TK0931 transposase YP_003588440.1 KEGG: fal:FRAAL6332 putative ATP-dependent helicase YP_003588441.1 PFAM: DinB family protein; KEGG: bbe:BBR47_03400 hypothetical protein YP_003588442.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: bbe:BBR47_03390 hypothetical protein YP_003588443.1 KEGG: FANCG; Fanconi anemia, complementation group G ; K10894 fanconi anemia group G protein YP_003588444.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003588445.1 KEGG: tex:Teth514_1283 hypothetical protein YP_003588446.1 PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_3048 transcriptional regulator, HxlR family YP_003588447.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cai:Caci_3622 short-chain dehydrogenase/reductase SDR YP_003588448.1 PFAM: major facilitator superfamily MFS_1; KEGG: fre:Franean1_0731 EmrB/QacA family drug resistance transporter YP_003588449.1 KEGG: cpt:CpB0012 hypothetical protein YP_003588450.1 PFAM: transcriptional regulator PadR family protein; KEGG: gym:GYMC10_1200 transcriptional regulator, PadR-like family YP_003588451.1 PFAM: major facilitator superfamily MFS_1; KEGG: gym:GYMC10_1199 major facilitator superfamily MFS_1 YP_003588452.1 KEGG: gym:GYMC10_3218 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003588453.1 PFAM: DinB family protein; KEGG: bwe:BcerKBAB4_4358 DinB family protein YP_003588454.1 KEGG: pjd:Pjdr2_2829 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003588455.1 KEGG: dhd:Dhaf_2249 putative transmembrane anti- sigma factor YP_003588456.1 KEGG: pjd:Pjdr2_2831 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588457.1 KEGG: dae:Dtox_1808 hypothetical protein YP_003588458.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: afu:AF1641 enoyl-CoA hydratase (fad-4) YP_003588459.1 TIGRFAM: cyanate lyase; KEGG: tbd:Tbd_1941 cyanate hydratase; PFAM: Cyanate lyase domain protein YP_003588460.1 KEGG: aac:Aaci_2631 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003588461.1 KEGG: pjd:Pjdr2_1704 hypothetical protein YP_003588462.1 KEGG: cak:Caul_0713 phosphoesterase PA-phosphatase related YP_003588463.1 KEGG: aac:Aaci_2634 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003588464.1 KEGG: bpu:BPUM_0229 major facilitator superfamily multidrug:cation symporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003588465.1 KEGG: dsy:DSY2636 hypothetical protein YP_003588466.1 KEGG: mar:MAE_42890 hypothetical protein YP_003588467.1 KEGG: sul:SYO3AOP1_0717 conserved hypothetical protein, putative cytochrome YP_003588468.1 KEGG: cpi:Cpin_6090 cytochrome c class I YP_003588469.1 KEGG: bay:RBAM_004210 YcnK; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003588470.1 KEGG: bcy:Bcer98_2787 hypothetical protein YP_003588471.1 PFAM: protein of unknown function DUF420; KEGG: aac:Aaci_0670 protein of unknown function DUF420 YP_003588472.1 KEGG: bcg:BCG9842_B4025 group-specific protein YP_003588473.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: bbe:BBR47_44880 probable N-acetylglucosamine- 6-phosphate deacetylase; PFAM: amidohydrolase YP_003588474.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: aba:Acid345_0510 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_003588475.1 KEGG: adg:Adeg_1480 K+-transporting ATPase, B subunit; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003588476.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: mbt:JTY_1061 putative potassium-transporting ATPase C chain; PFAM: K transporting ATPase KdpC subunit YP_003588477.1 KEGG: mca:MCA2214 sensor histidine kinase KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; GAF domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003588478.1 KEGG: hau:Haur_2274 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003588479.1 KEGG: aav:Aave_2095 NIPSNAP family protein YP_003588480.1 KEGG: hypothetical protein YP_003588481.1 PFAM: protein of unknown function DUF59; KEGG: aac:Aaci_0985 protein of unknown function DUF59 YP_003588482.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: aac:Aaci_0986 FeS assembly ATPase SufC; SMART: AAA ATPase YP_003588483.1 KEGG: gyc:GYMC61_3073 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_003588484.1 KEGG: gyc:GYMC61_3072 cysteine desulfurase, SufS subfamily; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003588485.1 KEGG: aac:Aaci_0989 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_003588486.1 KEGG: aac:Aaci_0990 FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003588487.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: aac:Aaci_0991 Rieske (2Fe-2S) iron-sulphur domain protein YP_003588488.1 KEGG: aac:Aaci_0992 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003588489.1 KEGG: bbe:BBR47_24190 hypothetical protein YP_003588490.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: btk:BT9727_2708 enoyl-CoA hydratase YP_003588491.1 PFAM: NUDIX hydrolase; KEGG: bcr:BCAH187_A5069 MutT/NUDIX family protein YP_003588492.1 KEGG: gym:GYMC10_5449 hypothetical protein YP_003588493.1 KEGG: afl:Aflv_1056 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_003588494.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588495.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588496.1 PFAM: protein of unknown function DUF485; KEGG: chy:CHY_2034 hypothetical protein YP_003588497.1 KEGG: chy:CHY_2033 sodium:solute transporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003588498.1 KEGG: bld:BLi00823 YfkE; TIGRFAM: calcium/proton antiporter, CaCA family; calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region YP_003588499.1 PFAM: Lytic transglycosylase catalytic; KEGG: pth:PTH_0856 hypothetical protein YP_003588500.1 KEGG: gwc:GWCH70_1852 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_003588501.1 KEGG: sus:Acid_0207 LysR family transcriptional regulator YP_003588502.1 KEGG: mta:Moth_0515 histidinol phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003588503.1 KEGG: bbe:BBR47_41660 phospho-2-dehydro-3- deoxyheptonate aldolase/chorismate mutase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II YP_003588504.1 KEGG: bbe:BBR47_41620 acetoin utilization protein AcuC; PFAM: histone deacetylase superfamily YP_003588505.1 KEGG: hmo:HM1_2366 acetoin utilization protein, subunit B; PFAM: CBS domain containing protein; amino acid- binding ACT domain protein; SMART: CBS domain containing protein YP_003588506.1 KEGG: bpu:BPUM_2617 acetoin dehydrogenase AcuA YP_003588507.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbe:BBR47_21120 acetyl-CoA synthetase YP_003588508.1 KEGG: aac:Aaci_1867 hypothetical protein YP_003588509.1 PFAM: aminotransferase class-III; KEGG: hmo:HM1_1941 ornithine aminotransferase, putative YP_003588510.1 PFAM: cyclase/dehydrase; KEGG: hmo:HM1_1942 streptomyces cyclase/dehydrase, putative YP_003588511.1 KEGG: adg:Adeg_1649 shikimate/quinate 5- dehydrogenase YP_003588512.1 KEGG: dth:DICTH_1916 heat shock protein, class I YP_003588513.1 PFAM: protein of unknown function DUF1641; KEGG: hut:Huta_2081 protein of unknown function DUF1641 YP_003588514.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb1817 NAD(FAD)-dependent dehydrogenase YP_003588515.1 PFAM: SirA family protein; KEGG: afu:AF0556 hypothetical protein YP_003588516.1 SMART: Rhodanese domain protein; KEGG: gka:GK2065 hypothetical protein YP_003588517.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; KEGG: afl:Aflv_0285 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003588518.1 KEGG: sab:SAB2270c two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003588519.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_48820 hypothetical protein YP_003588520.1 KEGG: adg:Adeg_0526 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003588521.1 PFAM: FAD linked oxidase domain protein; KEGG: gka:GK3215 D-lactate dehydrogenase YP_003588522.1 TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; KEGG: aac:Aaci_0902 pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003588523.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: aac:Aaci_0903 transketolase central region YP_003588524.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: sth:STH413 pyruvate dehydrogenase E2 YP_003588525.1 KEGG: bbe:BBR47_16730 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_003588526.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: sth:STH1086 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003588527.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: amt:Amet_0094 putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003588528.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; KEGG: adg:Adeg_1849 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_003588529.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: gym:GYMC10_4596 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III YP_003588530.1 KEGG: bbe:BBR47_09050 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003588531.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pjd:Pjdr2_6080 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003588532.1 PFAM: methylenetetrahydrofolate reductase; KEGG: tex:Teth514_1210 methylenetetrahydrofolate reductase YP_003588533.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: aac:Aaci_2351 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003588534.1 PFAM: Radical SAM domain protein; KEGG: bha:BH2218 hypothetical protein YP_003588535.1 KEGG: app:CAP2UW1_4702 hypothetical protein YP_003588536.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: aac:Aaci_1864 excinuclease ABC, C subunit; SMART: Excinuclease ABC C subunit domain protein YP_003588537.1 KEGG: oih:OB1643 Na(+):solute symporter YP_003588538.1 PFAM: AMP-dependent synthetase and ligase; KEGG: aac:Aaci_1254 acetate/CoA ligase YP_003588539.1 KEGG: gym:GYMC10_2089 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003588540.1 PFAM: protein of unknown function DUF190; KEGG: ccs:CCNA_02810 hypothetical protein YP_003588541.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: hmo:HM1_0095 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003588542.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: aac:Aaci_1863 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_003588543.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: aac:Aaci_1862 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003588544.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: aac:Aaci_1861 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003588545.1 KEGG: aac:Aaci_1854 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003588546.1 KEGG: sth:STH341 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003588547.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bbe:BBR47_17880 germination protein YP_003588548.1 KEGG: mta:Moth_0520 Ham1-like protein; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_003588549.1 KEGG: aac:Aaci_1846 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type YP_003588550.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bbe:BBR47_17940 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_003588551.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: bay:RBAM_025280 ATP-dependent protease ATP- binding subunit ClpX; SMART: AAA ATPase YP_003588552.1 TIGRFAM: ATP-dependent protease LonB; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; KEGG: pth:PTH_0806 ATP-dependent protease; SMART: AAA ATPase YP_003588553.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003588554.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: gym:GYMC10_1512 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_003588555.1 KEGG: lsp:Bsph_3977 GTP-binding protein; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003588556.1 TIGRFAM: glutamyl-tRNA reductase; KEGG: bpu:BPUM_2458 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_003588557.1 PFAM: cytochrome c assembly protein; KEGG: bbe:BBR47_18020 HemX protein YP_003588558.1 KEGG: adg:Adeg_1261 siroheme synthase; TIGRFAM: siroheme synthase YP_003588559.1 TIGRFAM: porphobilinogen deaminase; KEGG: gka:GK2645 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_003588560.1 KEGG: dau:Daud_1346 uroporphyrin-III C- methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4 YP_003588561.1 KEGG: tro:trd_1124 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_003588562.1 KEGG: rxy:Rxyl_0505 AsnC family transcriptional regulator YP_003588563.1 KEGG: bbe:BBR47_18060 glutamate-1-semialdehyde 2,1- aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003588564.1 KEGG: aac:Aaci_1834 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003588565.1 KEGG: hypothetical protein YP_003588566.1 KEGG: rrs:RoseRS_0583 TPR repeat-containing protein YP_003588567.1 KEGG: hypothetical protein YP_003588568.1 KEGG: pjd:Pjdr2_4429 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003588569.1 TIGRFAM: FolC bifunctional protein; KEGG: gyc:GYMC61_0880 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003588570.1 KEGG: aac:Aaci_1829 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003588571.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: gtn:GTNG_2558 pili biogenesis protein PilT- like ATPase; SMART: AAA ATPase YP_003588572.1 PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; KEGG: mta:Moth_0051 hypothetical protein YP_003588573.1 PFAM: Sporulation domain protein; KEGG: bam:Bamb_3353 sporulation domain-containing protein YP_003588574.1 KEGG: bbe:BBR47_18300 hypothetical protein YP_003588575.1 KEGG: bbe:BBR47_18310 septum formation protein Maf; TIGRFAM: maf protein; PFAM: Maf family protein YP_003588576.1 KEGG: gyc:GYMC61_0899 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003588577.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: aac:Aaci_1824 cell shape determining protein, MreB/Mrl family; SMART: actin/actin family protein YP_003588578.1 KEGG: btk:BT9727_4185 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003588579.1 TIGRFAM: rod shape-determining protein MreD; KEGG: aoe:Clos_1763 hypothetical protein YP_003588580.1 KEGG: pjd:Pjdr2_4419 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_003588581.1 KEGG: chy:CHY_0348 septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase YP_003588582.1 KEGG: bcl:ABC2799 cell division protein FtsW; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003588583.1 PFAM: Peptidase M23; KEGG: aac:Aaci_1819 peptidase M23 YP_003588584.1 PFAM: peptidase M50; KEGG: aac:Aaci_1818 peptidase M50 YP_003588585.1 KEGG: ckr:CKR_0792 hypothetical protein; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003588586.1 PFAM: protein of unknown function DUF464; KEGG: gym:GYMC10_1541 protein of unknown function DUF464 YP_003588587.1 KEGG: afl:Aflv_0696 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003588588.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003588589.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003588590.1 KEGG: afl:Aflv_0697 sporulation initiation phosphotransferase, spo0B YP_003588591.1 KEGG: gwc:GWCH70_2537 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP- binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein YP_003588592.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: aac:Aaci_1968 NADH:flavin oxidoreductase/NADH oxidase YP_003588593.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sth:STH1117 putative oxidoreductase YP_003588594.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: gtn:GTNG_3398 mannnose-6 phosphate isomelase; PFAM: mannose-6-phosphate isomerase type I YP_003588595.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: tex:Teth514_1787 nucleotidyl transferase YP_003588596.1 PFAM: glycosyl transferase group 1; KEGG: dau:Daud_0865 glycosyl transferase, group 1 YP_003588597.1 KEGG: sth:STH1119 glycosyltransferase, group I YP_003588598.1 PFAM: aminotransferase class I and II; KEGG: adg:Adeg_0048 aminotransferase class I and II YP_003588599.1 KEGG: mta:Moth_1189 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; regulatory protein GntR HTH; SMART: Transcription regulator, AsnC-type YP_003588600.1 PFAM: type II secretion system protein E; KEGG: acr:Acry_0893 type II secretion system protein E YP_003588601.1 PFAM: Type II secretion system F domain; KEGG: pfs:PFLU4079 putative general secretion pathway protein F YP_003588602.1 KEGG: aac:Aaci_1809 hypothetical protein YP_003588603.1 KEGG: dau:Daud_0994 N-terminal methylation protein YP_003588604.1 KEGG: mmi:MMAR_1063 transcriptional regulatory protein YP_003588605.1 KEGG: hypothetical protein YP_003588606.1 KEGG: mta:Moth_1546 hypothetical protein YP_003588607.1 KEGG: gbm:Gbem_1555 shikimate kinase; PFAM: shikimate kinase YP_003588608.1 KEGG: bbe:BBR47_19980 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003588609.1 PFAM: amino acid-binding ACT domain protein; KEGG: gym:GYMC10_1549 amino acid-binding ACT domain protein YP_003588610.1 KEGG: aac:Aaci_1022 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003588611.1 KEGG: hmo:HM1_1938 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003588612.1 KEGG: aac:Aaci_1803 DNA replication protein-like protein; PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase YP_003588613.1 KEGG: bpu:BPUM_2191 hypothetical protein YP_003588614.1 KEGG: pjd:Pjdr2_3991 SNF2-related protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein YP_003588615.1 KEGG: drm:Dred_0720 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003588616.1 KEGG: aac:Aaci_1799 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like YP_003588617.1 KEGG: gka:GK2423 glycine dehydrogenase subunit 2; PFAM: Glycine cleavage system P-protein-like YP_003588618.1 KEGG: hypothetical protein YP_003588619.1 PFAM: Phosphoglycerate mutase; KEGG: phosphoglycerate mutase gpmB YP_003588620.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: sth:STH1866 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003588621.1 PFAM: peptidase M24; creatinase; KEGG: gyc:GYMC61_0232 peptidase M24 YP_003588622.1 KEGG: aac:Aaci_1795 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein YP_003588623.1 KEGG: gtn:GTNG_2340 hypothetical protein YP_003588624.1 KEGG: dae:Dtox_2692 hypothetical protein YP_003588625.1 KEGG: aac:Aaci_1794 hypothetical protein YP_003588626.1 KEGG: aac:Aaci_1793 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase YP_003588627.1 KEGG: sth:STH1861 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB YP_003588628.1 KEGG: bbe:BBR47_23240 stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein YP_003588629.1 KEGG: pth:PTH_1169 hypothetical protein; TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD YP_003588630.1 KEGG: pjd:Pjdr2_2298 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE YP_003588631.1 PFAM: Sporulation stage III protein AF; KEGG: bbe:BBR47_23270 stage III sporulation protein AF YP_003588632.1 TIGRFAM: stage III sporulation protein AG; KEGG: bha:BH2791 mutants block sporulation after engulfment YP_003588633.1 KEGG: aac:Aaci_1786 hypothetical protein YP_003588634.1 KEGG: gym:GYMC10_2099 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003588635.1 KEGG: bbe:BBR47_23310 biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_003588636.1 PFAM: protein of unknown function DUF322; KEGG: dau:Daud_1017 hypothetical protein YP_003588637.1 KEGG: mta:Moth_1522 hypothetical protein YP_003588638.1 KEGG: bbe:BBR47_23340 hypothetical protein YP_003588639.1 KEGG: mta:Moth_1521 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003588640.1 PFAM: peptidase M22 glycoprotease; KEGG: bbe:BBR47_23360 peptidase M22 family protein YP_003588641.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aac:Aaci_1778 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003588642.1 KEGG: bha:BH2784 methylenetetrahydrofolate dehydrogenase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003588643.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: gyc:GYMC61_0248 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003588644.1 KEGG: sth:STH1845 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_003588645.1 PFAM: Polyprenyl synthetase; KEGG: sus:Acid_1114 farnesyl-diphosphate synthase YP_003588646.1 KEGG: pjd:Pjdr2_2312 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein YP_003588647.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bay:RBAM_022590 YqxC; SMART: RNA-binding S4 domain protein YP_003588648.1 KEGG: bbe:BBR47_23440 putative inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_003588649.1 KEGG: bha:BH2777 arginine repressor; TIGRFAM: arginine repressor; PFAM: arginine repressor YP_003588650.1 KEGG: sth:STH1835 DNA repair and genetic recombination protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_003588651.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: gwc:GWCH70_2315 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein YP_003588652.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: aac:Aaci_1767 sporulation transcriptional activator Spo0A; SMART: response regulator receiver YP_003588653.1 PFAM: YfkB-like domain protein; Radical SAM domain protein; KEGG: bha:BH0889 hypothetical protein YP_003588654.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pjd:Pjdr2_2248 peptidase S8 and S53 subtilisin kexin sedolisin YP_003588655.1 PFAM: SNARE associated Golgi protein; KEGG: sus:Acid_1106 alkaline phosphatase YP_003588656.1 PFAM: protein of unknown function DUF309; KEGG: bbe:BBR47_47480 hypothetical protein YP_003588657.1 KEGG: bbe:BBR47_52630 probable thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003588658.1 KEGG: saz:Sama_0331 hypothetical protein YP_003588659.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; SH3 type 3 domain protein; KEGG: bbe:BBR47_04570 putative regulatory protein; SMART: SH3 domain protein YP_003588660.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gwc:GWCH70_0923 short-chain dehydrogenase/reductase SDR YP_003588662.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: tpd:Teth39_0501 O-acetylhomoserine/O- acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein YP_003588663.1 KEGG: hypothetical protein YP_003588664.1 PFAM: extracellular solute-binding protein family 5; KEGG: cbi:CLJ_B1268 putative oligopeptide ABC transporter, oligopeptide-binding protein YP_003588665.1 KEGG: ter:Tery_0459 PucC protein YP_003588666.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: ote:Oter_2652 iron-sulfur cluster assembly accessory protein YP_003588667.1 KEGG: aac:Aaci_1989 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003588668.1 PFAM: Protein of unknown function; KEGG: afl:Aflv_0841 hypothetical protein YP_003588669.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: aac:Aaci_2266 biotin/lipoate A/B protein ligase YP_003588670.1 PFAM: band 7 protein; KEGG: dhd:Dhaf_2899 hypothetical protein YP_003588671.1 KEGG: TCEAL5; transcription elongation factor A (SII)-like 5 YP_003588672.1 KEGG: pjd:Pjdr2_2229 sporulation protein YqfC YP_003588673.1 PFAM: putative stage IV sporulation YqfD; KEGG: bbe:BBR47_20610 putative stage IV sporulation protein YP_003588674.1 PFAM: PhoH family protein; KEGG: gym:GYMC10_1762 PhoH family protein YP_003588675.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: aac:Aaci_1984 7TM receptor with intracellular metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003588676.1 PFAM: protein of unknown function UPF0054; KEGG: gym:GYMC10_1764 protein of unknown function UPF0054 YP_003588677.1 PFAM: diacylglycerol kinase; phosphoesterase PA- phosphatase related; KEGG: tte:TTE0973 diacylglycerol kinase YP_003588678.1 KEGG: bcl:ABC1681 Era, Era/TrmE family GTP-binding protein; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003588679.1 KEGG: gtn:GTNG_2423 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_003588680.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: pjd:Pjdr2_2239 glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit YP_003588681.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: hmo:HM1_2458 glycyl-tRNA synthetase, beta subunit YP_003588682.1 KEGG: bbe:BBR47_20710 probable control catabolite protein of gluconeogenic genes; PFAM: CBS domain containing protein; Helix-turn- helix type 11 domain protein; SMART: CBS domain containing protein YP_003588683.1 PFAM: protein of unknown function DUF299; KEGG: dae:Dtox_3045 protein of unknown function DUF299 YP_003588684.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: dau:Daud_1926 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein YP_003588685.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: aac:Aaci_1978 DNA primase; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003588686.1 KEGG: bha:BH1376 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein YP_003588688.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aac:Aaci_2056 acyl-CoA dehydrogenase domain protein YP_003588689.1 KEGG: rxy:Rxyl_1711 AMP-dependent synthetase and ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003588690.1 PFAM: protein of unknown function DUF34; KEGG: aac:Aaci_1974 protein of unknown function DUF34 YP_003588692.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003588693.1 KEGG: aac:Aaci_2556 transposase IS4 family protein YP_003588694.1 PFAM: Integrase catalytic region; KEGG: hmo:HM1_0159 transposase, putative YP_003588696.1 PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3199 major facilitator superfamily MFS_1 YP_003588697.1 KEGG: hmo:HM1_0159 transposase, putative YP_003588698.1 KEGG: cbe:Cbei_2571 hypothetical protein YP_003588699.1 KEGG: gvi:gll3657 MerR family transcriptional regulator YP_003588700.1 KEGG: gka:GK2355 hypothetical protein YP_003588701.1 KEGG: pth:PTH_0033 hypothetical protein YP_003588702.1 KEGG: dae:Dtox_2229 transposase family protein YP_003588703.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: ate:Athe_1938 beta-lactamase domain protein YP_003588704.1 PFAM: protein of unknown function DUF114; KEGG: adg:Adeg_0215 protein of unknown function DUF114 YP_003588705.1 KEGG: hypothetical protein YP_003588706.1 PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3141 GerA spore germination protein YP_003588707.1 KEGG: pjd:Pjdr2_3142 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003588708.1 KEGG: pjd:Pjdr2_3143 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_003588709.1 KEGG: pjd:Pjdr2_3144 hypothetical protein YP_003588710.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: pth:PTH_2548 hypothetical protein; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003588711.1 KEGG: gtn:GTNG_0239 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_003588712.1 TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; KEGG: bbe:BBR47_05970 phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003588713.1 KEGG: hoh:Hoch_3842 phosphoribosylformylglycinamidine synthase, PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_003588714.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: bbe:BBR47_05990 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003588715.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: drm:Dred_2366 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003588716.1 KEGG: bcy:Bcer98_0274 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003588717.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; KEGG: hmo:HM1_3108 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003588718.1 KEGG: gtn:GTNG_0246 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_003588719.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bha:BH0633 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003588720.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: adg:Adeg_0312 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; Phosphoribosylglycinamide synthetase, N- domain; Phosphoribosylglycinamide synthetase, C-domain YP_003588721.1 PFAM: Patatin; KEGG: dac:Daci_3593 patatin YP_003588722.1 PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_4993 major facilitator transporter YP_003588723.1 KEGG: aac:Aaci_1584 hypothetical protein YP_003588724.1 KEGG: cpr:CPR_0469 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_003588725.1 KEGG: lsp:Bsph_3158 hypothetical protein YP_003588726.1 KEGG: aac:Aaci_3026 YolD-like protein YP_003588727.1 KEGG: dau:Daud_1710 resolvase domain-containing protein; PFAM: Resolvase domain; regulatory protein MerR; SMART: regulatory protein MerR YP_003588728.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003588729.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003588730.1 KEGG: ckr:CKR_0249 hypothetical protein YP_003588731.1 KEGG: sth:STH2741 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003588732.1 PFAM: Proline dehydrogenase; KEGG: gka:GK3010 proline dehydrogenase YP_003588733.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis- type; KEGG: bbe:BBR47_09240 probable transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003588734.1 KEGG: hmo:HM1_0789 SNF2 family helicase, putative; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003588735.1 KEGG: dau:Daud_0258 hypothetical protein YP_003588736.1 PFAM: protein of unknown function DUF820; KEGG: dae:Dtox_3061 protein of unknown function DUF820 YP_003588737.1 PFAM: protein of unknown function UPF0158; KEGG: hoh:Hoch_5435 hypothetical protein YP_003588738.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: cbe:Cbei_2837 plasmid pRiA4b ORF-3 family protein YP_003588739.1 PFAM: copper amine oxidase domain protein; KEGG: sth:STH162 putative hydrolase YP_003588740.1 PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 hypothetical protein YP_003588741.1 KEGG: gyc:GYMC61_3296 aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde Dehydrogenase YP_003588742.1 PFAM: helix-turn-helix Fis-type; sigma-54 factor interaction domain-containing protein; KEGG: rca:Rcas_2042 Fis family GAF modulated sigma54 specific transcriptional regulator YP_003588743.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gwc:GWCH70_0570 alcohol dehydrogenase GroES domain protein YP_003588744.1 PFAM: copper amine oxidase domain protein; KEGG: bbe:BBR47_07390 hypothetical protein YP_003588745.1 KEGG: ter:Tery_1657 TPR repeat-containing protein YP_003588746.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: pjd:Pjdr2_0929 flavodoxin/nitric oxide synthase YP_003588747.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: sth:STH944 hypothetical protein YP_003588748.1 KEGG: tro:trd_1705 hypothetical transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003588749.1 KEGG: neu:NE0084 thioredoxin YP_003588750.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: nth:Nther_2586 transposase IS116/IS110/IS902 family protein YP_003588751.1 PFAM: protein of unknown function DUF820; KEGG: dhd:Dhaf_0120 protein of unknown function DUF820 YP_003588752.1 KEGG: ckr:CKR_0249 hypothetical protein YP_003588753.1 KEGG: hmo:HM1_1054 udp-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003588754.1 KEGG: dma:DMR_13500 GGDEF domain protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_003588755.1 KEGG: aac:Aaci_2955 hypothetical protein YP_003588756.1 KEGG: mth:MTH1789 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003588757.1 KEGG: bce:BC1215 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_003588758.1 KEGG: ddr:Deide_20315 putative dTDP-4- dehydrorhamnose 3,5-epimerase YP_003588759.1 KEGG: amr:AM1_0404 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_003588760.1 PFAM: glycosyl transferase family 2; KEGG: mca:MCA0619 glycosyl transferase, group 2 family protein YP_003588761.1 PFAM: glycosyl transferase group 1; KEGG: cyn:Cyan7425_3800 putative glycosyl transferase YP_003588762.1 KEGG: afo:Afer_1971 glycosyl transferase family 2 YP_003588763.1 PFAM: glycosyl transferase family 2; KEGG: cyp:PCC8801_0906 glycosyl transferase family 2 YP_003588764.1 PFAM: ABC-2 type transporter; KEGG: adg:Adeg_0506 ABC-2 type transporter YP_003588765.1 KEGG: aac:Aaci_0276 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588766.1 PFAM: Integrase catalytic region; KEGG: aac:Aaci_0499 integrase catalytic region YP_003588767.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: pth:PTH_2767 nucleoside-diphosphate-sugar epimerases YP_003588768.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: bbe:BBR47_42580 putative polysaccharide biosynthesis protein YP_003588769.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3643 glycosyl transferase, group 1 YP_003588770.1 KEGG: hau:Haur_3873 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase YP_003588771.1 TIGRFAM: sugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family; KEGG: tte:TTE0666 acetyltransferase YP_003588772.1 KEGG: tte:TTE0667 cell wall biogenesis regulatory protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003588774.1 KEGG: chy:CHY_1250 ISChy3, orf1 YP_003588775.1 KEGG: tko:TK0371 hypothetical protein YP_003588776.1 KEGG: mac:MA0098 hypothetical protein YP_003588777.1 PFAM: Radical SAM domain protein; KEGG: bcg:BCG9842_B0919 spore photoproduct lyase YP_003588778.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: pth:PTH_1557 hypothetical protein YP_003588779.1 KEGG: pcu:pc0918 hypothetical protein YP_003588780.1 KEGG: adg:Adeg_0266 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003588781.1 PFAM: PilT protein domain protein; KEGG: gvi:glr1771 hypothetical protein YP_003588782.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rxy:Rxyl_2744 cobalamin synthesis protein, P47K YP_003588783.1 KEGG: hps:HPSH_01625 hypothetical protein YP_003588784.1 PFAM: polysaccharide deacetylase; KEGG: cjd:JJD26997_0672 polysaccharide deacetylase family protein YP_003588785.1 PFAM: Asparaginase/glutaminase; KEGG: bmr:BMI_I1982 L-asparaginase type II, putative YP_003588786.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: tex:Teth514_1926 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003588787.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2739 major facilitator transporter YP_003588788.1 KEGG: tpd:Teth39_2217 hypothetical protein YP_003588789.1 KEGG: dhd:Dhaf_0353 helix-turn-helix domain- containing protein YP_003588790.1 KEGG: drm:Dred_0797 hypothetical protein YP_003588791.1 PFAM: DNA polymerase beta domain protein region; KEGG: tte:TTE1988 nucleotidyltransferase YP_003588792.1 PFAM: YcfA family protein; KEGG: chy:CHY_2496 hypothetical protein YP_003588793.1 PFAM: protein of unknown function UPF0150; KEGG: pth:PTH_0968 hypothetical protein YP_003588794.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588795.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588796.1 TIGRFAM: amidohydrolase; KEGG: gyc:GYMC61_3340 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003588797.1 PFAM: DNA polymerase beta domain protein region; KEGG: tte:TTE1988 nucleotidyltransferase YP_003588798.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: drm:Dred_1909 transposase IS116/IS110/IS902 family protein YP_003588799.1 KEGG: smg1; PI-3-kinase-related kinase SMG-1; K08873 PI-3-kinase-related kinase SMG- 1 YP_003588800.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588801.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588802.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dau:Daud_0403 DNA binding domain-containing protein YP_003588803.1 PFAM: PemK family protein; KEGG: dau:Daud_0402 transcriptional modulator of MazE/toxin, MazF YP_003588804.1 PFAM: protein of unknown function DUF521; KEGG: mth:MTH1421 hypothetical protein YP_003588805.1 PFAM: protein of unknown function DUF126; KEGG: mac:MA0244 hypothetical protein YP_003588806.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE1343 transcriptional regulator YP_003588807.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bcl:ABC3328 allantoate amidohydrolase; PFAM: peptidase M20 YP_003588808.1 PFAM: amidohydrolase; KEGG: bcl:ABC3327 hypothetical protein YP_003588809.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: mta:Moth_0465 ABC transporter, substrate- binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein family 3 YP_003588810.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2276 binding-protein-dependent transport systems inner membrane component YP_003588811.1 KEGG: mta:Moth_0467 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588812.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mka:MK0297 D-3-phosphoglycerate dehydrogenase YP_003588813.1 TIGRFAM: urocanate hydratase; KEGG: sth:STH3193 urocanate hydratase; PFAM: Urocanase YP_003588814.1 KEGG: gtn:GTNG_1226 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase YP_003588816.1 PFAM: protein of unknown function DUF820; KEGG: tex:Teth514_0998 hypothetical protein YP_003588817.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bbe:BBR47_44890 probable nitropropane dioxygenase YP_003588818.1 PFAM: Spore germination protein-like Gmad2, bacteria; KEGG: dau:Daud_0450 hypothetical protein YP_003588819.1 KEGG: drm:Dred_3248 SNF2 helicase associated domain- containing protein; PFAM: SNF2-related protein; SNF2 helicase associated domain protein ; zinc finger SWIM domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003588820.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tex:Teth514_2358 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003588821.1 KEGG: pth:PTH_1557 hypothetical protein YP_003588822.1 KEGG: Gm8951; predicted gene 8951 YP_003588823.1 KEGG: sth:STH938 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003588824.1 KEGG: pth:PTH_1601 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein YP_003588825.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: adg:Adeg_0186 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_003588826.1 KEGG: adg:Adeg_0188 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003588827.1 KEGG: adg:Adeg_1153 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_003588828.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: bcy:Bcer98_1444 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003588829.1 KEGG: bcg:BCG9842_B3491 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding YP_003588830.1 KEGG: pjd:Pjdr2_1303 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003588831.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bbe:BBR47_16200 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003588832.1 KEGG: bbe:BBR47_16210 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003588833.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: aac:Aaci_2226 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003588834.1 PFAM: UbiA prenyltransferase; KEGG: ctc:CTC01291 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase YP_003588835.1 PFAM: histidine triad (HIT) protein; KEGG: cpf:CPF_2281 HIT family protein YP_003588836.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gka:GK1317 acyl-CoA transferase/carnitine dehydratase YP_003588837.1 KEGG: hmo:HM1_0232 polyphosphate kinase; PFAM: Polyphosphate kinase YP_003588838.1 PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: hmo:HM1_0233 exopolyphosphatase, putative YP_003588839.1 KEGG: chy:CHY_1273 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003588840.1 TIGRFAM: catechol 2,3 dioxygenase; KEGG: tmz:Tmz1t_3109 catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003588841.1 PFAM: ferredoxin; KEGG: reh:H16_B0545 2Fe-2S ferredoxin YP_003588842.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: mpt:Mpe_A2284 phenol hydrolase beta subunit YP_003588843.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: mpt:Mpe_A2283 phenol hydrolase activator YP_003588844.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: rme:Rmet_1784 methane/phenol/toluene hydroxylase YP_003588845.1 KEGG: mpt:Mpe_A2316 putative serine/threonine protein kinase YP_003588846.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_7611 alpha/beta hydrolase fold YP_003588847.1 PFAM: Activator of aromatic catabolism; 4-vinyl reductase 4VR; KEGG: tmz:Tmz1t_1844 PAS/PAC sensor signal transduction histidine kinase YP_003588848.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; KEGG: azo:azo1220 aromatic/alkene monooxygenase, subunit gamma YP_003588849.1 KEGG: aac:Aaci_1622 betaine-aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003588850.1 KEGG: aac:Aaci_1621 2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003588851.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: aac:Aaci_1620 acetaldehyde dehydrogenase (acetylating); PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding YP_003588852.1 KEGG: aac:Aaci_1619 4-hydroxy-2-oxovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_003588853.1 KEGG: aac:Aaci_1618 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003588854.1 KEGG: gyc:GYMC61_2300 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003588855.1 PFAM: protein of unknown function DUF336; KEGG: pzu:PHZ_c2132 hypothetical protein YP_003588857.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ttj:TTHB244 phenol hydroxylase component B YP_003588858.1 KEGG: tth:TTC0429 hypothetical protein YP_003588859.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aac:Aaci_2119 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003588860.1 TIGRFAM: NAD+ synthetase; KEGG: aac:Aaci_2118 NAD+ synthetase; PFAM: NAD synthase YP_003588861.1 PFAM: protein of unknown function DUF28; KEGG: pth:PTH_1024 hypothetical protein YP_003588862.1 KEGG: pjd:Pjdr2_4403 hypothetical protein YP_003588863.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: pjd:Pjdr2_4402 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003588864.1 KEGG: aac:Aaci_2114 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_003588865.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: bbe:BBR47_18660 Holliday junction ATP- dependent DNA helicase; SMART: AAA ATPase YP_003588866.1 KEGG: bbe:BBR47_18670 hypothetical protein YP_003588867.1 KEGG: aac:Aaci_2112 RNA polymerase, sigma 28 subunit, SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_003588868.1 KEGG: pjd:Pjdr2_1315 hypothetical protein YP_003588869.1 KEGG: mta:Moth_1695 S-adenosylmethionine; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein YP_003588870.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; KEGG: gka:GK2587 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_003588871.1 KEGG: bbe:BBR47_18720 hypothetical protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003588872.1 KEGG: bbe:BBR47_18730 hypothetical protein YP_003588873.1 PFAM: protein of unknown function DUF421; KEGG: hmo:HM1_1754 duf421 protein YP_003588874.1 PFAM: polysaccharide biosynthesis protein; KEGG: aac:Aaci_2104 stage V sporulation protein B YP_003588875.1 KEGG: pjd:Pjdr2_4390 hypothetical protein YP_003588876.1 KEGG: dhd:Dhaf_3610 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003588877.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: aac:Aaci_2097 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein YP_003588878.1 KEGG: ade:Adeh_0179 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003588879.1 KEGG: dae:Dtox_2285 beta-lactamase domain protein YP_003588880.1 KEGG: aac:Aaci_2579 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003588881.1 KEGG: ote:Oter_0268 appr-1-p processing domain- containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003588882.1 PFAM: Uncharacterised protein family UPF0324; KEGG: dhd:Dhaf_1147 hypothetical protein YP_003588883.1 KEGG: gwc:GWCH70_3053 hypothetical protein YP_003588884.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_56310 transcriptional regulator YP_003588885.1 KEGG: gka:GK0676 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_003588886.1 TIGRFAM: malate synthase A; KEGG: aac:Aaci_2530 malate synthase A; PFAM: Malate synthase family protein YP_003588887.1 TIGRFAM: malate synthase A; KEGG: aac:Aaci_2530 malate synthase A; PFAM: Malate synthase family protein YP_003588888.1 TIGRFAM: phosphoserine aminotransferase; KEGG: lsp:Bsph_3670 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003588889.1 KEGG: rxy:Rxyl_2342 acetoacetyl-CoA synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase YP_003588890.1 KEGG: eat:EAT1b_1895 hypothetical protein YP_003588891.1 KEGG: aac:Aaci_0846 hypothetical protein YP_003588892.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aac:Aaci_1009 DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein YP_003588893.1 KEGG: aac:Aaci_1008 hypothetical protein YP_003588894.1 KEGG: aac:Aaci_1007 DNA repair nucleotidyltransferase/DNA polymerase-like protein YP_003588895.1 KEGG: sth:STH1116 putative phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003588896.1 KEGG: tpd:Teth39_0477 peptidoglycan binding domain- containing protein YP_003588897.1 KEGG: aac:Aaci_0192 hypothetical protein YP_003588898.1 KEGG: cte:CT1277 hypothetical protein YP_003588899.1 KEGG: tro:trd_0391 cysteine desulfurase; PFAM: aminotransferase class V YP_003588900.1 KEGG: aac:Aaci_2883 hypothetical protein YP_003588901.1 PFAM: class II aldolase/adducin family protein; KEGG: tth:TTC0412 L-ribulose-phosphate 4-epimerase YP_003588902.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3170 putative short-chain dehydrogenase/reductase YP_003588903.1 KEGG: aac:Aaci_1747 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; Tetratricopeptide repeat YP_003588904.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bcy:Bcer98_1446 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003588905.1 KEGG: mta:Moth_1874 hypothetical protein YP_003588906.1 KEGG: aac:Aaci_1004 hypothetical protein YP_003588907.1 KEGG: hor:Hore_16490 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003588908.1 KEGG: aac:Aaci_1049 3D domain protein; PFAM: 3D domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003588909.1 PFAM: ABC transporter, ATPase, predicted; KEGG: gyc:GYMC61_1322 ABC transporter, ATPase, predicted YP_003588910.1 PFAM: thioesterase superfamily protein; KEGG: gka:GK1743 hypothetical protein YP_003588911.1 KEGG: sth:STH2917 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_003588912.1 KEGG: aac:Aaci_1871 hypothetical protein YP_003588913.1 TIGRFAM: phosphatidylserine decarboxylase; KEGG: hmo:HM1_2775 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003588914.1 KEGG: aac:Aaci_0149 sortase family protein; TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B YP_003588915.1 KEGG: KIAA0754 YP_003588916.1 KEGG: bvi:Bcep1808_2190 DNA internalization-related competence protein ComEC/Rec2 YP_003588917.1 KEGG: gtn:GTNG_1969 hypothetical protein YP_003588918.1 KEGG: gtn:GTNG_1968 hypothetical protein YP_003588919.1 KEGG: proteophosphoglycan ppg4 YP_003588921.1 PFAM: alpha/beta hydrolase fold; KEGG: tte:TTE2547 alpha/beta superfamily hydrolase/acyltransferase YP_003588922.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: rmr:Rmar_2483 Mur ligase middle domain protein YP_003588923.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: tte:TTE2545 D-alanine-D-alanine ligase and related ATP-grasp enzyme; PFAM: D-alanine--D-alanine ligase domain protein YP_003588924.1 PFAM: S-layer domain protein; KEGG: tte:TTE2606 hypothetical protein YP_003588925.1 KEGG: aac:Aaci_2210 hypothetical protein YP_003588926.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_2994 alanine-glyoxylate aminotransferase YP_003588927.1 KEGG: amc:MADE_02276 vcbs repeat-containing protein YP_003588928.1 PFAM: NUDIX hydrolase; KEGG: ade:Adeh_1821 lipoate-protein ligase B YP_003588929.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bwe:BcerKBAB4_1126 enoyl-(acyl carrier protein) reductase YP_003588930.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003588931.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003588932.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: afl:Aflv_1909 short chain dehydrogenase YP_003588933.1 PFAM: regulatory protein TetR; KEGG: bbe:BBR47_54950 probable transcriptional regulator YP_003588934.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bbe:BBR47_54940 putative methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; ArgK protein; cobalamin B12-binding domain protein YP_003588935.1 PFAM: Beta-ketoacyl synthase; KEGG: aac:Aaci_2413 beta-ketoacyl synthase YP_003588936.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mav:MAV_5076 acyl-CoA ligase YP_003588937.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; KEGG: bbe:BBR47_48990 probable 3-hydroxyacyl-CoA dehydrogenase YP_003588938.1 KEGG: bbe:BBR47_48980 probable acetyl-CoA C- acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003588939.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gtn:GTNG_2958 acyl-CoA dehydrogenase YP_003588940.1 KEGG: aac:Aaci_0139 GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; SMART: regulatory protein LuxR YP_003588941.1 KEGG: ttj:TTHA0401 hypothetical protein YP_003588942.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ttj:TTHA0400 zinc-binding dehydrogenase YP_003588943.1 PFAM: ribonucleotide reductase; KEGG: aac:Aaci_0133 ribonucleotide reductase YP_003588944.1 PFAM: Aldehyde Dehydrogenase; KEGG: aac:Aaci_2504 aldehyde dehydrogenase YP_003588945.1 KEGG: aac:Aaci_0150 ABC-1 domain protein; PFAM: ABC-1 domain protein; SMART: serine/threonine protein kinase YP_003588946.1 KEGG: hypothetical protein; K12879 THO complex subunit 2 YP_003588947.1 KEGG: sen:SACE_6847 PE-PGRS family protein YP_003588948.1 KEGG: aac:Aaci_0151 hypothetical protein YP_003588949.1 KEGG: gka:GK2770 hypothetical protein YP_003588950.1 KEGG: gyc:GYMC61_0747 hypothetical protein YP_003588952.1 KEGG: hypothetical protein YP_003588953.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aac:Aaci_1225 GCN5-related N- acetyltransferase YP_003588954.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afu:AF0093 sulfate ABC transporter, permease protein (CysT) YP_003588955.1 KEGG: rle:pRL120171 putative ATP-binding component of ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase YP_003588956.1 KEGG: gyc:GYMC61_0645 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; Sporulation domain protein; SMART: cell wall hydrolase/autolysin YP_003588957.1 PFAM: Abortive infection protein; KEGG: pjd:Pjdr2_0972 abortive infection protein YP_003588958.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_4834 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003588959.1 PFAM: peptidase M16 domain protein; KEGG: bbe:BBR47_34060 hypothetical protein YP_003588960.1 PFAM: peptidase M16 domain protein; KEGG: gym:GYMC10_4117 peptidase M16 domain protein YP_003588961.1 KEGG: pfl:PFL_3309 hypothetical protein YP_003588962.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: adg:Adeg_0889 nitrogen-fixing NifU domain protein YP_003588963.1 KEGG: bha:BH0943 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003588964.1 KEGG: aac:Aaci_1104 two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver YP_003588965.1 KEGG: gym:GYMC10_0985 hypothetical protein YP_003588966.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mpl:Mpal_0345 UDP-N-acetylglucosamine 2- epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003588967.1 KEGG: rci:RCIX444 putative ABC-type sulfonate import system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003588968.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0111 ABC transporter permease protein YP_003588969.1 KEGG: bra:BRADO0680 ABC transporter substrate- binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_003588970.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003588971.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003588972.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: pth:PTH_1048 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003588973.1 KEGG: chy:CHY_2204 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003588974.1 KEGG: bbe:BBR47_18920 hypothetical protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003588975.1 KEGG: bcl:ABC1584 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003588976.1 KEGG: gka:GK2564 iron-sulfur cofactor synthesis; PFAM: aminotransferase class V YP_003588977.1 KEGG: chy:CHY_2197 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like YP_003588978.1 PFAM: SPW repeat; KEGG: rhi:NGR_b23070 hypothetical protein YP_003588979.1 KEGG: gka:GK0461 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003588980.1 PFAM: Protein of unknown function DUF2294; KEGG: sca:Sca_0285 hypothetical protein YP_003588981.1 KEGG: bld:BLi02222 YjgC; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region YP_003588982.1 PFAM: protein of unknown function DUF1641; KEGG: bwe:BcerKBAB4_0503 hypothetical protein YP_003588983.1 KEGG: gtn:GTNG_0662 molybdopterin biosynthesis MoeA protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003588984.1 KEGG: cyt:cce_0097 putative molybdopterin-guanine dinucleotide biosynthesis protein A YP_003588985.1 KEGG: bha:BH1265 hypothetical protein YP_003588986.1 KEGG: mta:Moth_0096 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase YP_003588987.1 PFAM: protein of unknown function UPF0118; KEGG: gym:GYMC10_1593 protein of unknown function UPF0118 YP_003588988.1 TIGRFAM: alanyl-tRNA synthetase; KEGG: aac:Aaci_2026 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_003588989.1 PFAM: Resolvase domain; regulatory protein MerR; KEGG: min:Minf_2376 transposon IS605 OrfA, integrase-resolvase YP_003588990.1 PFAM: putative transposase IS891/IS1136/IS1341 family; KEGG: mtp:Mthe_1117 IS605 family transposase OrfB YP_003588991.1 PFAM: protein of unknown function DUF965; KEGG: bsu:BSU27400 hypothetical protein YP_003588992.1 KEGG: drm:Dred_0775 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003588993.1 PFAM: protein of unknown function DUF1292; KEGG: pth:PTH_1066 hypothetical protein YP_003588994.1 PFAM: DNA polymerase beta domain protein region; KEGG: pth:PTH_0436 hypothetical protein YP_003588995.1 PFAM: HEPN domain protein; KEGG: pth:PTH_0437 hypothetical protein YP_003588996.1 KEGG: hau:Haur_2989 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV YP_003588997.1 KEGG: gwc:GWCH70_3096 hypothetical protein YP_003588999.1 KEGG: swo:Swol_1699 acetoin operon expression regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003589000.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_2091 5-oxoprolinase (ATP- hydrolyzing) YP_003589001.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rca:Rcas_1777 hydantoinase B/oxoprolinase YP_003589002.1 PFAM: Acetone carboxylase gamma subunit; KEGG: gwc:GWCH70_1201 acetone carboxylase gamma subunit YP_003589003.1 KEGG: rxy:Rxyl_2342 acetoacetyl-CoA synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase YP_003589004.1 KEGG: cbb:CLD_2909 sensory box sigma-54 dependent transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003589005.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rca:Rcas_1777 hydantoinase B/oxoprolinase YP_003589006.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_2091 5-oxoprolinase (ATP- hydrolyzing) YP_003589007.1 PFAM: Acetone carboxylase gamma subunit; KEGG: rca:Rcas_1776 acetone carboxylase gamma subunit YP_003589008.1 KEGG: dae:Dtox_1930 hypothetical protein YP_003589009.1 KEGG: hor:Hore_11320 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003589010.1 KEGG: bbe:BBR47_44110 putative heme-based signal transducer protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003589011.1 KEGG: aac:Aaci_2851 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003589012.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: tth:TT_P0074 acyl-CoA dehydrogenase AidB YP_003589013.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sai:Saci_1779 medium-chain-fatty-acid-CoA ligase YP_003589014.1 KEGG: nfa:nfa53170 hypothetical protein YP_003589015.1 KEGG: aac:Aaci_2423 sulfite reductase (NADPH); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003589016.1 PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; KEGG: afu:AF1511 hypothetical protein YP_003589017.1 PFAM: acylphosphatase; KEGG: blj:BLD_0151 acylphosphatase YP_003589018.1 PFAM: protein of unknown function DUF421; KEGG: smt:Smal_3940 hypothetical protein YP_003589020.1 PFAM: inositol monophosphatase; KEGG: gym:GYMC10_0871 inositol monophosphatase YP_003589021.1 PFAM: Patatin; KEGG: bca:BCE_4900 phospholipase, putative YP_003589022.1 PFAM: aminodeoxychorismate lyase; KEGG: bbe:BBR47_19060 hypothetical protein YP_003589023.1 TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: gwc:GWCH70_2482 uridine kinase; SMART: AAA ATPase YP_003589024.1 PFAM: LmbE family protein; KEGG: tex:Teth514_1010 LmbE family protein YP_003589025.1 KEGG: aac:Aaci_3073 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003589026.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: aac:Aaci_2455 multicopper oxidase type 3 YP_003589027.1 KEGG: nml:Namu_5000 putative metal cation transporter YP_003589028.1 KEGG: C6 transcription factor, putative YP_003589029.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1696 DNA polymerase beta subunit YP_003589030.1 KEGG: drm:Dred_0896 HEPN domain-containing protein; PFAM: HEPN domain protein; SMART: HEPN domain protein YP_003589032.1 PFAM: copper amine oxidase domain protein; KEGG: lsp:Bsph_2053 hypothetical protein YP_003589033.1 KEGG: aac:Aaci_1137 hypothetical protein YP_003589034.1 PFAM: globin; KEGG: bbe:BBR47_45900 hypothetical protein YP_003589035.1 KEGG: bcy:Bcer98_0207 nitrite reductase (NAD(P)H), small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003589036.1 KEGG: gka:GK1868 assimilatory nitrite reductase subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein YP_003589037.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: gka:GK1866 assimilatory nitrate reductase catalytic subunit YP_003589038.1 PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi00365 NasA YP_003589039.1 PFAM: ANTAR domain protein; KEGG: mch:Mchl_4961 response regulator receiver and ANTAR domain protein YP_003589040.1 KEGG: pjd:Pjdr2_5919 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3-like YP_003589041.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: gtn:GTNG_1638 short-chain-specific acyl-CoA dehydrogenase YP_003589043.1 KEGG: esi:Exig_0511 hypothetical protein YP_003589044.1 KEGG: gym:GYMC10_1690 RNA polymerase, sigma 28 subunit, SigK; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_003589045.1 PFAM: thioesterase superfamily protein; KEGG: aac:Aaci_2418 thioesterase superfamily protein YP_003589047.1 KEGG: rxy:Rxyl_2338 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase YP_003589048.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hau:Haur_1560 acyl-CoA dehydrogenase domain- containing protein YP_003589049.1 PFAM: aminoglycoside phosphotransferase; KEGG: rxy:Rxyl_2337 aminoglycoside phosphotransferase YP_003589050.1 KEGG: mta:Moth_2039 hypothetical protein YP_003589051.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: gym:GYMC10_3654 integral membrane sensor signal transduction histidine kinase YP_003589052.1 KEGG: pjd:Pjdr2_5870 hypothetical protein YP_003589053.1 PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_5871 glycosyl transferase family 2 YP_003589054.1 PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_5872 glycosyl transferase group 1 YP_003589055.1 KEGG: pjd:Pjdr2_5874 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; TPR repeat- containing protein; SMART: Tetratricopeptide repeat YP_003589056.1 PFAM: glycosyl transferase family 2; TPR repeat- containing protein; KEGG: pjd:Pjdr2_5875 glycosyl transferase family 2 YP_003589057.1 PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_4; KEGG: pjd:Pjdr2_5876 glycosyl transferase family 2 YP_003589058.1 KEGG: pjd:Pjdr2_5877 hypothetical protein YP_003589059.1 KEGG: chy:CHY_2613 hypothetical protein YP_003589060.1 KEGG: rsq:Rsph17025_0513 UBA/ThiF-type NAD/FAD binding protein YP_003589061.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mta:Moth_2018 ferredoxin-dependent glutamate synthase YP_003589062.1 KEGG: mta:Moth_2093 hypothetical protein YP_003589063.1 KEGG: vkg; viking YP_003589064.1 PFAM: glycosyl transferase group 1; KEGG: sth:STH1367 hypothetical protein YP_003589065.1 PFAM: glycosyl transferase group 1; KEGG: sth:STH1367 hypothetical protein YP_003589066.1 PFAM: glycosyl transferase family 2; KEGG: sth:STH1362 glycosyl transferase YP_003589067.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sth:STH1369 UDP-glucose 4-epimerase YP_003589068.1 PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_4077 nucleotidyl transferase YP_003589069.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_4078 NAD-dependent epimerase/dehydratase YP_003589070.1 PFAM: TrkA-N domain protein; UDP-glucose/GDP- mannose dehydrogenase dimerisation; KEGG: sth:STH1368 UDP-N-acetyl-D-mannosamine dehydrogenase YP_003589071.1 KEGG: hmo:HM1_0387 hypothetical protein YP_003589072.1 KEGG: bbe:BBR47_17370 hypothetical protein; PFAM: glycosyl transferase family 2 YP_003589073.1 KEGG: bbe:BBR47_19090 penicillin binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003589074.1 KEGG: nth:Nther_1736 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003589075.1 TIGRFAM: ribosome biogenesis GTPase YqeH; KEGG: gym:GYMC10_1709 ribosome biogenesis GTPase YqeH; PFAM: GTP-binding protein HSR1-related YP_003589076.1 KEGG: testis development protein nyd-sp29 YP_003589077.1 TIGRFAM: shikimate 5-dehydrogenase; KEGG: bbe:BBR47_19890 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_003589078.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: gtn:GTNG_2458 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_003589079.1 KEGG: aac:Aaci_2014 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain YP_003589080.1 KEGG: aac:Aaci_2013 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003589081.1 KEGG: dau:Daud_1865 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003589082.1 KEGG: aac:Aaci_2011 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_003589083.1 TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein; PFAM: Soluble ligand binding domain; KEGG: aau:AAur_2244 putative comEA protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003589084.1 KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003589085.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: tpd:Teth39_0476 Ku domain-containing protein; SMART: Ku domain protein YP_003589086.1 KEGG: aac:Aaci_1464 hypothetical protein YP_003589087.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aac:Aaci_0845 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003589088.1 KEGG: gtn:GTNG_2449 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_003589089.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: bha:BH1915 small acid soluble protein YP_003589090.1 KEGG: aac:Aaci_2005 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003589091.1 TIGRFAM: spore protease; KEGG: pjd:Pjdr2_2199 spore protease; PFAM: peptidase M63 germination protease YP_003589092.1 KEGG: gwc:GWCH70_2443 stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein YP_003589093.1 KEGG: fal:FRAAL0487 putative sensor-like histidine kinase YP_003589094.1 KEGG: aac:Aaci_2000 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003589095.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: aac:Aaci_1999 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein YP_003589096.1 KEGG: bbe:BBR47_20280 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein YP_003589097.1 PFAM: GrpE protein; KEGG: gwc:GWCH70_2438 GrpE protein YP_003589098.1 KEGG: aac:Aaci_1996 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_003589099.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: aac:Aaci_1995 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003589100.1 KEGG: bcy:Bcer98_3038 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_003589101.1 PFAM: protein of unknown function DUF839; copper amine oxidase domain protein; KEGG: mca:MCA1083 hypothetical protein YP_003589102.1 PFAM: alpha/beta hydrolase fold; KEGG: rce:RC1_2982 hydrolase, alpha YP_003589103.1 KEGG: aac:Aaci_0807 phenylacetate-CoA oxygenase, PaaG subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_003589104.1 PFAM: phenylacetic acid degradation B; KEGG: aac:Aaci_0808 phenylacetic acid degradation B YP_003589105.1 KEGG: sth:STH2484 phenylacetic acid degradation protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_003589106.1 KEGG: sth:STH2483 phenylacetic acid degradation protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_003589107.1 PFAM: regulatory protein TetR; KEGG: aac:Aaci_0806 transcriptional regulator, TetR family YP_003589108.1 KEGG: aac:Aaci_0811 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003589109.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: aac:Aaci_0812 ethyl tert-butyl ether degradation EthD YP_003589110.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aac:Aaci_0815 enoyl-CoA hydratase/isomerase YP_003589111.1 PFAM: thioesterase superfamily protein; KEGG: hma:rrnB0244 phenylacetic acid degradation protein PaaI YP_003589112.1 PFAM: Aldehyde Dehydrogenase; KEGG: gyc:GYMC61_2837 aldehyde dehydrogenase YP_003589113.1 KEGG: aac:Aaci_0813 hypothetical protein YP_003589114.1 KEGG: gka:GK2035 acetyl-CoA acetyltransferase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase YP_003589115.1 KEGG: esi:Exig_0396 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003589116.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_1052 acyl-CoA dehydrogenase domain protein YP_003589117.1 KEGG: chy:CHY_1745 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003589118.1 KEGG: rmr:Rmar_1731 tetratricopeptide TPR_2 YP_003589119.1 PFAM: protein of unknown function DUF558; KEGG: pth:PTH_0881 16S ribosomal RNA methyltransferase RsmE YP_003589120.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bbe:BBR47_20340 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003589121.1 PFAM: NUDIX hydrolase; KEGG: gym:GYMC10_1747 NUDIX hydrolase YP_003589122.1 KEGG: aac:Aaci_1990 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter YP_003589123.1 KEGG: aac:Aaci_1451 protein of unknown function methylase putative; PFAM: methyltransferase small; PUA domain containing protein; SMART: PUA domain containing protein YP_003589124.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: mxa:MXAN_0438 MOSC domain-containing protein YP_003589125.1 KEGG: hmo:HM1_0011 hypothetical protein YP_003589126.1 KEGG: efe:EFER_3211 putative regulatory protein, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003589127.1 PFAM: protein of unknown function DUF427; KEGG: nfa:nfa19250 hypothetical protein YP_003589128.1 PFAM: protein of unknown function DUF323; KEGG: noc:Noc_2029 hypothetical protein YP_003589129.1 KEGG: noc:Noc_2028 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260 YP_003589130.1 PFAM: MaoC domain protein dehydratase; KEGG: nca:Noca_1459 dehydratase YP_003589131.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_2206 3-ketoacyl-(acyl-carrier- protein) reductase YP_003589132.1 PFAM: protein of unknown function DUF35; KEGG: pol:Bpro_5254 hypothetical protein YP_003589133.1 KEGG: pag:PLES_43091 thiolase YP_003589134.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: aac:Aaci_1851 L-carnitine dehydratase/bile acid-inducible protein F YP_003589135.1 PFAM: MaoC domain protein dehydratase; KEGG: ttj:TTHB019 MaoC-related acyl dehydratase YP_003589136.1 PFAM: MmgE/PrpD family protein; KEGG: pth:PTH_1493 hypothetical protein YP_003589137.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ace:Acel_0400 short chain enoyl-CoA hydratase YP_003589138.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_5625 L-carnitine dehydratase/bile acid-inducible protein F YP_003589139.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpt:Bpet2270 acyl-CoA dehydrogenase YP_003589140.1 PFAM: pyruvate carboxyltransferase; KEGG: gwc:GWCH70_1838 pyruvate carboxyltransferase YP_003589141.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rhi:NGR_c06050 3-oxoacyl-[acyl-carrier- protein] reductase YP_003589142.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbe:BBR47_40570 putative 2,4-dienoyl-CoA reductase [NADPH] YP_003589143.1 KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003589144.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aac:Aaci_1209 acyl-CoA dehydrogenase domain protein YP_003589145.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: drm:Dred_1909 transposase IS116/IS110/IS902 family protein YP_003589146.1 KEGG: aac:Aaci_1210 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase YP_003589147.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aac:Aaci_1211 short-chain dehydrogenase/reductase SDR YP_003589148.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gyc:GYMC61_1052 acyl-CoA dehydrogenase domain protein YP_003589149.1 KEGG: mae:Maeo_1125 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003589150.1 PFAM: Luciferase-like, subgroup; KEGG: nar:Saro_1469 luciferase-like YP_003589151.1 KEGG: kpu:KP1_2781 putative enzyme YP_003589152.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gtn:GTNG_1173 medium-chain-fatty-acid-CoA ligase YP_003589153.1 KEGG: pth:PTH_2900 transcriptional activator of acetoin/glycerol metabolism; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003589154.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2882 5-exo-alcohol dehydrogenase YP_003589155.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: tro:trd_1391 StyB protein YP_003589156.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa33810 putative acyl-CoA dehydrogenase YP_003589157.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mes:Meso_3279 acyl-CoA dehydrogenase-like YP_003589158.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: chy:CHY_1736 enoyl-CoA hydratase/isomerase family protein YP_003589159.1 PFAM: Aldehyde Dehydrogenase; KEGG: gwc:GWCH70_0886 aldehyde dehydrogenase YP_003589160.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pmo:Pmob_0729 short-chain dehydrogenase/reductase SDR YP_003589161.1 PFAM: Chlorite dismutase; KEGG: pjd:Pjdr2_4832 chlorite dismutase YP_003589162.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: sth:STH926 2-cys peroxiredoxin YP_003589163.1 KEGG: sth:STH927 hypothetical protein YP_003589164.1 KEGG: dae:Dtox_0417 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003589165.1 KEGG: dau:Daud_1710 resolvase domain-containing protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003589166.1 KEGG: bgl:bglu_2g05130 transcriptional regulator, winged helix family protein YP_003589167.1 KEGG: pth:PTH_0247 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003589168.1 PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1255 major facilitator superfamily MFS_1 YP_003589169.1 KEGG: adg:Adeg_1147 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003589170.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bbe:BBR47_41920 molybdopterin biosynthesis protein MoeB YP_003589171.1 KEGG: bbe:BBR47_41870 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003589172.1 KEGG: amt:Amet_2208 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_003589173.1 KEGG: bha:BH2767 hypothetical protein YP_003589174.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis- type; KEGG: bbe:BBR47_23660 transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003589175.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: aac:Aaci_1459 Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_003589176.1 KEGG: gka:GK2378 branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase alpha subunit); PFAM: dehydrogenase E1 component YP_003589177.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bbe:BBR47_23700 2-oxoisovalerate dehydrogenase beta subunit YP_003589178.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: sth:STH2160 branched-chain alpha-keto acid dehydrogenase E2 YP_003589179.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: aac:Aaci_1757 lipoic acid synthetase; PFAM: Radical SAM domain protein YP_003589180.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: tte:TTE2389 methylmalonyl-CoA mutase N- terminal domain-containing protein; PFAM: methylmalonyl-CoA mutase YP_003589181.1 KEGG: hmo:HM1_0377 methymalonyl-coa mutase C- terminal domain protein; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: cobalamin B12-binding domain protein; Glyoxalase/bleomycin resistance protein/dioxygenase YP_003589182.1 PFAM: carboxyl transferase; KEGG: bbe:BBR47_26900 putative propionyl-CoA carboxylase YP_003589183.1 PFAM: peptidase M20; KEGG: geo:Geob_2000 peptidase T-like protein YP_003589184.1 PFAM: NUDIX hydrolase; KEGG: tte:TTE1310 NTP pyrophosphohydrolase including oxidative damage repair enzyme YP_003589185.1 KEGG: bbe:BBR47_23770 hypothetical protein YP_003589186.1 KEGG: bcy:Bcer98_2791 sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane YP_003589187.1 KEGG: aac:Aaci_1751 hypothetical protein YP_003589188.1 PFAM: ferric-uptake regulator; KEGG: afl:Aflv_0995 Fe2+ uptake regulation protein YP_003589189.1 TIGRFAM: alanine dehydrogenase; KEGG: chy:CHY_0666 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003589190.1 KEGG: cenp-B, putative YP_003589191.1 KEGG: sth:STH1821 recombinase; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003589192.1 TIGRFAM: phosphopentomutase; KEGG: aac:Aaci_1749 phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein YP_003589193.1 KEGG: bwe:BcerKBAB4_3917 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_003589194.1 KEGG: gym:GYMC10_2140 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003589195.1 KEGG: bgl:bglu_1g22730 GCN5-related N- acetyltransferase YP_003589196.1 KEGG: dae:Dtox_1125 hypothetical protein YP_003589197.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcy:Bcer98_1455 major facilitator transporter YP_003589198.1 KEGG: sth:STH1241 hypothetical protein; TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type YP_003589199.1 KEGG: bbe:BBR47_37810 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003589200.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bbe:BBR47_37800 pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_003589201.1 PFAM: phosphoribosyltransferase; KEGG: bha:BH2541 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_003589202.1 KEGG: aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) ; K00609 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003589203.1 KEGG: bpu:BPUM_1450 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003589204.1 KEGG: bbe:BBR47_37710 carbamoyl-phosphate synthase large chain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003589205.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: gka:GK1153 dihydroorotate dehydrogenase electron transfer subunit YP_003589206.1 KEGG: afl:Aflv_1801 dihydroorotate dehydrogenase 1B; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_003589207.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: drm:Dred_1687 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003589208.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: dhd:Dhaf_1179 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003589209.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding domain protein; KEGG: met:M446_3012 oxidoreductase FAD-binding subunit YP_003589210.1 KEGG: met:M446_3011 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_003589211.1 PFAM: purine catabolism PurC domain protein; KEGG: mta:Moth_2125 CdaR family transcriptional regulator YP_003589212.1 PFAM: major facilitator superfamily MFS_1; KEGG: ooe:OEOE_0265 major facilitator superfamily permease YP_003589213.1 KEGG: azc:AZC_3897 putative allantoinase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_003589214.1 KEGG: ate:Athe_0519 hypothetical protein YP_003589215.1 PFAM: transposase IS200-family protein; KEGG: dae:Dtox_0900 transposase IS200-family protein YP_003589216.1 KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003589217.1 KEGG: cli:Clim_1219 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003589218.1 KEGG: gka:GK0570 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003589219.1 KEGG: eba:ebA1549 hypothetical protein YP_003589220.1 KEGG: SGPP2; sphingosine-1-phosphate phosphotase 2 ; K04717 sphingosine-1-phosphate phosphotase 2 YP_003589221.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ssp:SSP0519 putative oxidoreductase YP_003589222.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003589223.1 KEGG: aac:Aaci_3073 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003589224.1 KEGG: bha:BH0327 hypothetical protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: protein of unknown function DUF324 YP_003589225.1 TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: ttu:TERTU_4366 CRISPR-associated protein, Crm2 family YP_003589226.1 PFAM: CRISPR-associated protein, Cmr3; KEGG: ttu:TERTU_4365 CRISPR-associated protein, Cmr3 family YP_003589227.1 KEGG: ttu:TERTU_4364 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324 YP_003589228.1 KEGG: dau:Daud_1819 CRISPR-associated Cmr5 family protein; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1 YP_003589229.1 KEGG: ttu:TERTU_4362 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324 YP_003589230.1 KEGG: mvu:Metvu_1220 CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812 YP_003589231.1 KEGG: lga:LGAS_1849 prolyl aminopeptidase YP_003589232.1 KEGG: avn:Avin_15780 transposase, IS891/IS1136/IS1341; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003589233.1 PFAM: Acetamidase/Formamidase; KEGG: aac:Aaci_0774 acetamidase/formamidase YP_003589234.1 PFAM: amino acid permease-associated region; KEGG: gyc:GYMC61_0413 amino acid permease- associated region YP_003589235.1 KEGG: tro:trd_A0665 glutamine synthetase (glutamate- -ammonia ligase) (GS); PFAM: glutamine synthetase catalytic region YP_003589236.1 KEGG: nth:Nther_1911 PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003589237.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbe:BBR47_06130 probable branched-chain amino acid ABC transporter substrate binding protein YP_003589238.1 PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06140 probable branched-chain amino acid ABC transporter permease YP_003589239.1 PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06150 probable branched-chain amino acid ABC transporter permease YP_003589240.1 KEGG: bbe:BBR47_06160 probable branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589241.1 KEGG: bbe:BBR47_06170 probable branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589242.1 KEGG: aac:Aaci_2143 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein YP_003589243.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: gwc:GWCH70_0919 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component YP_003589244.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: pth:PTH_2703 transposase and inactivated derivatives YP_003589245.1 PFAM: carbonic anhydrase; Carbonic anhydrase, YbcF- related; KEGG: bay:RBAM_031920 YvdA YP_003589246.1 KEGG: gym:GYMC10_5507 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003589247.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: gym:GYMC10_5508 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003589248.1 PFAM: Cell wall-active antibiotics response protein; KEGG: gym:GYMC10_5509 cell wall-active antibiotics response protein YP_003589249.1 PFAM: PspA/IM30 family protein; KEGG: gym:GYMC10_5510 phage shock protein A, PspA YP_003589250.1 PFAM: PspC domain protein; KEGG: gym:GYMC10_5511 phage shock protein C, PspC YP_003589251.1 PFAM: PspA/IM30 family protein; KEGG: gym:GYMC10_5512 phage shock protein A, PspA YP_003589252.1 KEGG: gym:GYMC10_5513 hypothetical protein YP_003589253.1 KEGG: mei:Msip34_2318 hypothetical protein YP_003589254.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003589255.1 KEGG: dau:Daud_1710 resolvase domain-containing protein; PFAM: Resolvase domain; regulatory protein MerR; SMART: regulatory protein MerR YP_003589256.1 PFAM: ROK family protein; KEGG: gym:GYMC10_2583 ROK family protein YP_003589257.1 PFAM: Methyltransferase type 12; KEGG: acr:Acry_2848 methyltransferase type 11 YP_003589258.1 PFAM: protein of unknown function DUF134; KEGG: cce:Ccel_0627 protein of unknown function DUF134 YP_003589259.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: drm:Dred_1909 transposase IS116/IS110/IS902 family protein YP_003589260.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cce:Ccel_0628 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_003589261.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ttj:TTHA1263 hypothetical protein YP_003589262.1 PFAM: protein of unknown function DUF16; KEGG: ate:Athe_0246 hypothetical protein YP_003589263.1 KEGG: chl:Chy400_2365 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_003589264.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: mta:Moth_2275 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; glycosyl transferase family 3 YP_003589265.1 KEGG: sfu:Sfum_1834 hypothetical protein YP_003589266.1 PFAM: protein of unknown function DUF990; KEGG: eat:EAT1b_1970 protein of unknown function DUF990 YP_003589267.1 PFAM: protein of unknown function DUF990; KEGG: cce:Ccel_2521 protein of unknown function DUF990 YP_003589268.1 KEGG: sth:STH2664 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589269.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bbe:BBR47_37370 probable fibronectin-binding protein YP_003589270.1 KEGG: pjd:Pjdr2_3769 calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_003589271.1 TIGRFAM: diaminopimelate epimerase; KEGG: mta:Moth_0888 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003589272.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mta:Moth_0890 hypothetical protein YP_003589273.1 PFAM: protein of unknown function DUF370; KEGG: pth:PTH_1796 hypothetical protein YP_003589274.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bbe:BBR47_37340 guanylate kinase; PFAM: guanylate kinase YP_003589275.1 KEGG: gyc:GYMC61_1949 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003589276.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: pjd:Pjdr2_3757 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003589277.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: gka:GK1170 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_003589278.1 TIGRFAM: peptide deformylase; KEGG: mta:Moth_0897 peptide deformylase; PFAM: formylmethionine deformylase YP_003589279.1 KEGG: hmo:HM1_2133 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003589280.1 KEGG: aac:Aaci_1322 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003589281.1 KEGG: aac:Aaci_1323 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_003589282.1 PFAM: Protein phosphatase 2C-like; KEGG: pjd:Pjdr2_3751 protein serine/threonine phosphatase; SMART: protein phosphatase 2C domain protein YP_003589283.1 KEGG: bbe:BBR47_37250 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain; PASTA domain containing protein YP_003589284.1 KEGG: pjd:Pjdr2_3749 ribosome small subunit- dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_003589285.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: gym:GYMC10_1957 ribulose-phosphate 3- epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003589286.1 KEGG: aac:Aaci_1329 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003589287.1 PFAM: protein of unknown function DUF322; KEGG: pjd:Pjdr2_3744 protein of unknown function DUF322 YP_003589288.1 PFAM: Dak phosphatase; KEGG: lpj:JDM1_1366 hypothetical protein YP_003589289.1 KEGG: aac:Aaci_1330 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003589290.1 KEGG: hypothetical protein YP_003589291.1 KEGG: bbe:BBR47_36400 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative YP_003589292.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bha:BH2589 lipopolysaccharide core biosynthesis; PFAM: cytidylyltransferase YP_003589293.1 PFAM: Patatin; KEGG: bbe:BBR47_36370 hypothetical protein YP_003589294.1 KEGG: bcl:ABC2374 hypothetical protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003589295.1 PFAM: protein of unknown function DUF177; KEGG: gym:GYMC10_4250 protein of unknown function DUF177 YP_003589296.1 KEGG: gwc:GWCH70_1006 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003589297.1 KEGG: bsu:BSU15880 fatty acid biosynthesis transcriptional regulator YP_003589298.1 KEGG: bbe:BBR47_36280 probable phosphate:acyl-[acyl carrier protein] acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003589299.1 KEGG: pjd:Pjdr2_3492 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_003589300.1 KEGG: gtn:GTNG_1043 3-ketoacyl-(acyl-carrier- protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003589301.1 KEGG: aac:Aaci_1345 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003589302.1 KEGG: aac:Aaci_1346 3-oxoacyl-(acyl-carrier- protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_003589303.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: aac:Aaci_1347 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003589304.1 KEGG: hypothetical protein YP_003589305.1 KEGG: pjd:Pjdr2_3487 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003589306.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: gtn:GTNG_1047 signal recognition particle- docking protein FtsY; SMART: AAA ATPase YP_003589307.1 PFAM: putative helix-turn-helix protein YlxM/p13 family protein; KEGG: pjd:Pjdr2_3485 putative helix-turn-helix protein YlxM/p13 family protein YP_003589308.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: gka:GK1196 signal recognition particle GTPase; SMART: AAA ATPase YP_003589309.1 KEGG: gtn:GTNG_1050 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003589310.1 KEGG: aac:Aaci_1355 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003589311.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: pjd:Pjdr2_3480 tRNA (guanine-N1)- methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003589312.1 KEGG: bld:BLi01824 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003589313.1 TIGRFAM: signal peptidase I; KEGG: hor:Hore_12270 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003589314.1 KEGG: bcl:ABC2285 GTPase; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_003589315.1 KEGG: acp:A2cp1_0300 ribonuclease H; PFAM: ribonuclease HII/HIII YP_003589316.1 TIGRFAM: penicillin-binding protein 2; KEGG: aac:Aaci_2332 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003589317.1 PFAM: protein of unknown function UPF0102; KEGG: tte:TTE1452 hypothetical protein YP_003589318.1 KEGG: bbe:BBR47_10110 hypothetical protein YP_003589319.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: gtn:GTNG_0782 FixA protein YP_003589320.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: tte:TTE0547 electron transfer flavoprotein subunit alpha YP_003589321.1 PFAM: FAD dependent oxidoreductase; KEGG: afl:Aflv_1250 dehydrogenase (flavoprotein) YP_003589322.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mta:Moth_0061 ferredoxin YP_003589323.1 KEGG: gka:GK1576 hypothetical protein YP_003589324.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: rxy:Rxyl_1395 Mg chelatase-related protein; SMART: AAA ATPase YP_003589325.1 KEGG: swo:Swol_2157 dolichyl-phosphate beta-D- mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein YP_003589326.1 KEGG: rxy:Rxyl_0756 hypothetical protein YP_003589327.1 PFAM: Helix-turn-helix type 11 domain protein; 3H domain protein; KEGG: aac:Aaci_2341 3H domain protein YP_003589328.1 KEGG: afl:Aflv_0705 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_003589329.1 KEGG: hmo:HM1_1864 cysteine desulfurase family protein; PFAM: aminotransferase class V YP_003589330.1 KEGG: dhd:Dhaf_2112 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003589331.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: amt:Amet_1632 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 YP_003589332.1 KEGG: SEC1; SM/Sec1-family protein YP_003589333.1 KEGG: fra:Francci3_4281 hypothetical protein YP_003589334.1 TIGRFAM: glutamate racemase; KEGG: adg:Adeg_0479 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003589335.1 KEGG: bbe:BBR47_47720 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003589336.1 KEGG: bbe:BBR47_48630 hypothetical protein YP_003589337.1 KEGG: pth:PTH_0102 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003589338.1 KEGG: swo:Swol_0928 hypothetical protein YP_003589339.1 KEGG: gym:GYMC10_4201 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003589340.1 KEGG: gwc:GWCH70_1100 succinyl-CoA synthetase, alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA- binding domain protein YP_003589341.1 KEGG: hmo:HM1_2210 DNA processing protein dpra, putative; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003589342.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: pjd:Pjdr2_3465 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003589343.1 TIGRFAM: gid protein; KEGG: aac:Aaci_1382 gid protein; PFAM: glucose-inhibited division protein A YP_003589344.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gyc:GYMC61_1996 tyrosine recombinase XerC YP_003589345.1 PFAM: 20S proteasome A and B subunits; KEGG: gwc:GWCH70_1105 20S proteasome A and B subunits YP_003589346.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: bbe:BBR47_34880 ATP-dependent hsl protease ATP-binding subunit HslU; SMART: AAA ATPase YP_003589347.1 KEGG: bbe:BBR47_34870 GTP-sensing transcriptional pleiotropic repressor; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein YP_003589348.1 KEGG: mta:Moth_0768 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_003589349.1 KEGG: afl:Aflv_1743 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003589350.1 KEGG: net:Neut_0748 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003589351.1 KEGG: aac:Aaci_1389 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_003589352.1 KEGG: gym:GYMC10_4190 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_003589353.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: aac:Aaci_1391 flagellar assembly protein FliH/type III secretion system HrpE YP_003589354.1 SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: bld:BLi01844 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region YP_003589355.1 KEGG: viscerotropic leishmaniasis antigen YP_003589356.1 PFAM: MgtE intracellular region; KEGG: cpi:Cpin_1608 collagen triple helix repeat protein YP_003589357.1 KEGG: rce:RC1_0224 flagellar hook-length control protein, putative YP_003589358.1 PFAM: flagellar hook capping protein; KEGG: pth:PTH_2082 flagellar hook capping protein YP_003589359.1 KEGG: gym:GYMC10_4182 fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003589360.1 PFAM: flagellar FlbD family protein; KEGG: gyc:GYMC61_2012 flagellar FlbD family protein YP_003589361.1 PFAM: flagellar basal body-associated protein FliL; KEGG: aac:Aaci_1401 flagellar basal body-associated protein FliL YP_003589362.1 KEGG: bha:BH2446 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_003589363.1 KEGG: gyc:GYMC61_2015 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein YP_003589364.1 KEGG: bbe:BBR47_34690 chemotaxis response protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003589365.1 PFAM: flagellar biosynthesis protein FliO; KEGG: gtn:GTNG_1086 flagella biosynthesis protein FliZ YP_003589366.1 KEGG: bbe:BBR47_34670 flagellar biosynthetic protein FliP precursor; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003589367.1 KEGG: bbe:BBR47_34660 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003589368.1 KEGG: gym:GYMC10_4173 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003589369.1 KEGG: aac:Aaci_1409 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003589370.1 KEGG: pjd:Pjdr2_3436 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003589371.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: hmo:HM1_2244 GTP-binding signal recognition particle protein, putative; SMART: AAA ATPase YP_003589372.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: afl:Aflv_1719 antiactivator of flagellar biosynthesis FleN, an ATPase YP_003589373.1 KEGG: aba:Acid345_1770 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase YP_003589374.1 KEGG: gym:GYMC10_4167 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein YP_003589375.1 KEGG: bbe:BBR47_34580 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003589376.1 PFAM: CheC domain protein; KEGG: afl:Aflv_1715 chemotaxis protein phosphatase CheC YP_003589377.1 stimulates methylation of MCP proteins; KEGG: tte:TTE1414 chemoreceptor glutamine deamidase CheD; PFAM: CheD family protein YP_003589378.1 KEGG: hmo:HM1_2251 RNA polymerase sigma factor, FliA/whig family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_003589379.1 PFAM: protein of unknown function DUF342; KEGG: hor:Hore_16620 predicted polymerase, contains PALM domain, HD hydrolase domain and Zn-ribbon domain YP_003589380.1 KEGG: sat:SYN_02383 phosphoenolpyruvate synthase YP_003589381.1 KEGG: pjd:Pjdr2_3421 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003589382.1 KEGG: chy:CHY_1786 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003589383.1 TIGRFAM: uridylate kinase; KEGG: bbe:BBR47_34460 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003589384.1 KEGG: chy:CHY_1784 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003589385.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: bbe:BBR47_34440 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003589386.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bbe:BBR47_34430 phosphatidate cytidyltransferase YP_003589387.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bcb:BCB4264_A3354 1-deoxy-D-xylulose 5- phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003589388.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: aac:Aaci_1426 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_003589389.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; KEGG: bwe:BcerKBAB4_4131 4-hydroxy-3-methylbut-2-en- 1-yl diphosphate synthase; PFAM: IspG family protein YP_003589390.1 KEGG: pjd:Pjdr2_3812 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein YP_003589391.1 PFAM: glycosyl transferase family 2; KEGG: tte:TTE1399 cell wall biosynthesis glycosyltransferase YP_003589392.1 SMART: Exonuclease; phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; KEGG: aac:Aaci_1427 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_003589393.1 PFAM: protein of unknown function DUF150; KEGG: afl:Aflv_1699 uncharacterized conserved protein, YhbC family YP_003589394.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; KEGG: bbe:BBR47_34360 transcription elongation protein NusA; SMART: KH domain protein YP_003589395.1 PFAM: protein of unknown function DUF448; KEGG: aac:Aaci_1433 protein of unknown function DUF448 YP_003589396.1 KEGG: aac:Aaci_1435 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein YP_003589397.1 KEGG: aac:Aaci_1436 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003589398.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: aac:Aaci_1437 phosphoesterase RecJ domain protein YP_003589399.1 KEGG: aac:Aaci_1438 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; DKCLD domain protein YP_003589400.1 KEGG: bbe:BBR47_34280 riboflavin biosynthesis protein RibC; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase YP_003589401.1 KEGG: gyc:GYMC61_2052 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003589402.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: aac:Aaci_1442 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_003589403.1 KEGG: ddr:Deide_3p01020 hypothetical protein YP_003589404.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gwc:GWCH70_0885 alcohol dehydrogenase GroES domain protein YP_003589405.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: mpt:Mpe_A0950 propane monoxygenase hydroxylase large subunit YP_003589406.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: vei:Veis_4410 oxidoreductase FAD-binding subunit YP_003589407.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: bra:BRADO4348 putative methane/phenol/toluene monooxygenase (A subunit, beta chain) YP_003589408.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: msl:Msil_1648 monooxygenase component MmoB/DmpM YP_003589409.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: pth:PTH_2703 transposase and inactivated derivatives YP_003589410.1 PFAM: AMP-dependent synthetase and ligase; KEGG: oih:OB2666 AMP-binding enzyme YP_003589411.1 KEGG: gyc:GYMC61_3296 aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde Dehydrogenase YP_003589412.1 PFAM: protein of unknown function DUF779; KEGG: gka:GK3199 hypothetical protein YP_003589413.1 KEGG: gtn:GTNG_0616 putative regulator of acetoin metabolism; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003589414.1 PFAM: polysaccharide deacetylase; KEGG: gka:GK1270 deacetylase YP_003589415.1 PFAM: peptidase M16 domain protein; KEGG: bbe:BBR47_34230 probable zinc protease YP_003589416.1 KEGG: dau:Daud_0937 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003589417.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cag:Cagg_2685 thioredoxin reductase YP_003589418.1 KEGG: mta:Moth_1062 hypothetical protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_003589419.1 TIGRFAM: dipicolinic acid synthetase, A subunit; KEGG: bbe:BBR47_34210 dipicolinate synthase A chain YP_003589420.1 KEGG: bbe:BBR47_34200 dipicolinate synthase B chain; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein YP_003589421.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bbe:BBR47_34190 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003589422.1 KEGG: bcb:BCB4264_A3898 aspartate kinase I; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003589423.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: mta:Moth_1068 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003589424.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: aac:Aaci_1460 beta-lactamase domain protein YP_003589425.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; KEGG: aac:Aaci_0339 4-hydroxyphenylacetate 3- monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase YP_003589426.1 KEGG: gka:GK3033 3,4-dihydroxyphenylacetate 2,3- dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3- dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003589427.1 KEGG: aac:Aaci_0336 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003589428.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; dihydrodipicolinate synthase; KEGG: aac:Aaci_0341 2,4-dihydroxyhept-2-ene-1,7- dioic acid aldolase; PFAM: dihydrodipicolinate synthetase YP_003589429.1 TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; KEGG: tth:TTC0592 2-hydroxyhepta-2,4-diene-1,7- dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7- dioate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003589430.1 KEGG: aac:Aaci_0338 5-carboxymethyl-2- hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003589431.1 PFAM: Extracellular ligand-binding receptor; KEGG: dau:Daud_0668 extracellular ligand-binding receptor YP_003589432.1 PFAM: inner-membrane translocator; KEGG: gtn:GTNG_2983 branched chain amino acid ABC transporter permease YP_003589433.1 PFAM: inner-membrane translocator; KEGG: gtn:GTNG_2982 branched chain amino acid ABC transporter permease YP_003589434.1 KEGG: gur:Gura_2127 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589435.1 KEGG: gsu:GSU1730 branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589437.1 TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; KEGG: gka:GK2027 pyruvate dehydrogenase E1 (lipoamide) alpha subunit; PFAM: dehydrogenase E1 component YP_003589438.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: hma:rrnB0199 pyruvate dehydrogenase YP_003589439.1 PFAM: YheO domain protein; KEGG: tpd:Teth39_1426 YheO domain-containing protein YP_003589440.1 KEGG: rmr:Rmar_2450 3-oxoacyl-(acyl-carrier- protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003589441.1 KEGG: bcb:BCB4264_A1366 transcriptional regulator, PadR family; TIGRFAM: poly-beta-hydroxybutyrate-responsive repressor; PFAM: transcriptional regulator PadR family protein YP_003589442.1 KEGG: pai:PAE0906 paREP7 YP_003589443.1 KEGG: bcy:Bcer98_1042 polyhydroxyalkanoic acid synthase, PhaR subunit YP_003589444.1 KEGG: rxy:Rxyl_2393 3-ketoacyl-(acyl-carrier- protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003589445.1 KEGG: bcy:Bcer98_1044 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: alpha/beta hydrolase fold; Poly-beta- hydroxybutyrate polymerase domain protein YP_003589446.1 PFAM: peptidase S14 ClpP; KEGG: bbe:BBR47_34150 translocation-enhancing protein YP_003589447.1 KEGG: mta:Moth_1070 hypothetical protein YP_003589448.1 KEGG: aac:Aaci_1463 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase YP_003589449.1 KEGG: bwe:BcerKBAB4_4127 major facilitator transporter YP_003589450.1 PFAM: amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_3384 amino acid-binding ACT domain protein YP_003589451.1 SMART: helix-turn-helix domain protein; KEGG: rxy:Rxyl_1422 hypothetical protein YP_003589452.1 PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: bay:RBAM_009420 YhcN YP_003589453.1 PFAM: protein of unknown function DUF520; KEGG: aac:Aaci_1469 protein of unknown function DUF520 YP_003589454.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bbe:BBR47_34000 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003589455.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; KEGG: bbe:BBR47_33990 probable CDP-diacylglycerol-- glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003589456.1 KEGG: aac:Aaci_1471 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain YP_003589457.1 KEGG: aac:Aaci_1472 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003589458.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: aac:Aaci_1473 RecA protein; SMART: AAA ATPase YP_003589459.1 PFAM: regulatory protein RecX; KEGG: lrh:LGG_01831 regulatory protein, RecX family YP_003589460.1 SMART: metal-dependent phosphohydrolase HD region; KH domain protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; KEGG: bbe:BBR47_33940 2',3'-cyclic-nucleotide 2'- phosphodiesterase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup YP_003589461.1 PFAM: metallophosphoesterase; KEGG: adg:Adeg_1474 metallophosphoesterase YP_003589462.1 PFAM: Stage V sporulation protein S; KEGG: bpu:BPUM_1601 stage V sporulation protein S YP_003589463.1 PFAM: peptidase M19 renal dipeptidase; KEGG: aac:Aaci_1477 membrane dipeptidase YP_003589464.1 PFAM: Spore coat protein CotE; KEGG: aac:Aaci_1478 spore coat protein E YP_003589465.1 KEGG: hmo:HM1_2608 hypothetical protein YP_003589466.1 KEGG: aac:Aaci_1480 hypothetical protein YP_003589467.1 KEGG: aac:Aaci_1481 hypothetical protein YP_003589468.1 KEGG: bbe:BBR47_13680 hypothetical protein YP_003589469.1 KEGG: gym:GYMC10_4948 hypothetical protein YP_003589470.1 KEGG: aac:Aaci_1010 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_003589471.1 KEGG: aac:Aaci_0805 hypothetical protein YP_003589472.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003589473.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003589474.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: aac:Aaci_1484 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB YP_003589475.1 PFAM: protein of unknown function DUF1333; KEGG: aac:Aaci_1485 protein of unknown function DUF1333 YP_003589476.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS IV domain protein; KEGG: gtn:GTNG_1160 DNA mismatch repair protein MutS; SMART: MutS III domain protein; DNA mismatch repair protein MutS domain protein YP_003589477.1 KEGG: gtn:GTNG_1161 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003589478.1 PFAM: protein of unknown function DUF548; KEGG: adg:Adeg_1923 protein of unknown function DUF548 YP_003589479.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gtn:GTNG_1167 tRNA delta(2)- isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; Isopentenyl transferase YP_003589480.1 KEGG: pjd:Pjdr2_2610 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003589481.1 KEGG: sth:STH3166 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_003589482.1 KEGG: bbe:BBR47_13460 hypothetical protein YP_003589483.1 PFAM: inner-membrane translocator; KEGG: gtn:GTNG_2983 branched chain amino acid ABC transporter permease YP_003589484.1 PFAM: inner-membrane translocator; KEGG: dau:Daud_0670 inner-membrane translocator YP_003589485.1 KEGG: mch:Mchl_5338 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589486.1 PFAM: Luciferase-like, subgroup; KEGG: rpf:Rpic12D_0164 luciferase-like monooxygenase YP_003589487.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: aac:Aaci_0762 flavin reductase domain protein FMN-binding YP_003589488.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbe:BBR47_40870 hypothetical protein YP_003589489.1 PFAM: homogentisate 12-dioxygenase; KEGG: btk:BT9727_0215 homogentisate 1,2-dioxygenase YP_003589490.1 KEGG: chl:Chy400_2743 beta-lactamase domain protein YP_003589491.1 KEGG: aac:Aaci_1566 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003589492.1 KEGG: aac:Aaci_1567 GTP-binding protein HSR1- related YP_003589493.1 PFAM: Aluminium resistance family protein; KEGG: pjd:Pjdr2_2617 aluminium resistance family protein YP_003589494.1 KEGG: pjd:Pjdr2_2618 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003589495.1 TIGRFAM: glutamine synthetase, type I; KEGG: pjd:Pjdr2_2619 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003589496.1 PFAM: cytochrome c class I; KEGG: eat:EAT1b_0893 cytochrome c class I YP_003589497.1 TIGRFAM: LexA repressor; KEGG: bha:BH2356 LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_003589498.1 KEGG: bfa:Bfae_10630 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003589499.1 PFAM: DSBA oxidoreductase; KEGG: bay:RBAM_035520 YwbO YP_003589500.1 KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003589501.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; KEGG: tsi:TSIB_2042 IS element ISTsi1 orfA, putative resolvase; SMART: regulatory protein MerR YP_003589502.1 PFAM: protein of unknown function DUF542 ScdA domain protein; KEGG: cac:CAC0071 hypothetical protein YP_003589503.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: gtn:GTNG_0656 respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_003589504.1 KEGG: bce:BC2120 respiratory nitrate reductase delta chain; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit YP_003589505.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: gtn:GTNG_1713 nitrate reductase beta subunit YP_003589506.1 TIGRFAM: nitrate reductase, alpha subunit; KEGG: gtn:GTNG_0653 respiratory nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003589507.1 KEGG: gvi:gsr3843 hypothetical protein YP_003589508.1 KEGG: gtn:GTNG_0652 hypothetical protein YP_003589509.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK0766 nitrate/nitrite transporter YP_003589510.1 PFAM: transposase IS3/IS911 family protein; KEGG: pth:PTH_2416 hypothetical protein YP_003589511.1 PFAM: NifZ family protein; KEGG: avn:Avin_01680 nitrogen fixation protein NifZ YP_003589512.1 PFAM: amino acid permease-associated region; KEGG: bpt:Bpet3919 amino acid transporter YP_003589513.1 PFAM: oxidoreductase molybdopterin binding; KEGG: vfm:VFMJ11_1152 sulfite-dehydrogenase YP_003589514.1 PFAM: protein of unknown function DUF323; KEGG: vfi:VF_1077 NirV precursor YP_003589515.1 PFAM: Protein of unknown function DUF2000; KEGG: amt:Amet_1548 hypothetical protein YP_003589516.1 KEGG: stp:Strop_1040 hypothetical protein YP_003589517.1 KEGG: amt:Amet_1547 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003589518.1 PFAM: transposase IS3/IS911 family protein; KEGG: dae:Dtox_2623 transposase IS3/IS911 family protein YP_003589519.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: amt:Amet_1405 phage integrase family protein YP_003589520.1 PFAM: putative transposase; KEGG: rle:pRL110341 putative transposase for insertion sequence element YP_003589521.1 PFAM: FAD dependent oxidoreductase; KEGG: pmx:PERMA_1461 sulfide-quinone reductase YP_003589522.1 KEGG: cli:Clim_2404 hypothetical protein YP_003589523.1 KEGG: ttj:TTHB175 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589524.1 KEGG: mta:Moth_1823 NifC-like ABC-type porter; TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003589525.1 KEGG: mta:Moth_1824 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003589526.1 KEGG: scl:sce1136 putative regulator of molybdate uptake; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003589527.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aac:Aaci_1902 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003589528.1 KEGG: gyc:GYMC61_0509 primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region YP_003589529.1 PFAM: AAA ATPase central domain protein; peptidase M41; KEGG: aac:Aaci_1639 vesicle-fusing ATPase; SMART: AAA ATPase YP_003589530.1 KEGG: swo:Swol_1259 hypothetical protein YP_003589531.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: bcy:Bcer98_1267 hypothetical protein YP_003589532.1 KEGG: drm:Dred_1759 hypothetical protein YP_003589533.1 PFAM: amidohydrolase; KEGG: aac:Aaci_1645 amidohydrolase YP_003589534.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: dau:Daud_0648 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related YP_003589535.1 PFAM: glycosidase PH1107-related; KEGG: tpd:Teth39_2180 glycosidase, PH1107-related YP_003589536.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: gym:GYMC10_2243 CoA-binding domain protein YP_003589537.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: bbe:BBR47_25050 hypothetical protein YP_003589538.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: bcl:ABC2065 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_003589539.1 TIGRFAM: pantoate/beta-alanine ligase; KEGG: pth:PTH_0221 panthothenate synthetase; PFAM: Pantoate-beta-alanine ligase YP_003589540.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: gyc:GYMC61_0501 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003589541.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; KEGG: sth:STH1400 transcriptional repressor, BirA- like; PFAM: biotin/lipoate A/B protein ligase; Helix-turn- helix type 11 domain protein; biotin protein ligase domain protein YP_003589542.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: afw:Anae109_2353 tRNA cytidylyltransferase YP_003589543.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: pjd:Pjdr2_2439 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003589544.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: aac:Aaci_1657 MazG nucleotide pyrophosphohydrolase YP_003589545.1 KEGG: aac:Aaci_1659 sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein YP_003589546.1 KEGG: bbe:BBR47_09120 probable undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA YP_003589547.1 KEGG: pjd:Pjdr2_4001 hypothetical protein YP_003589548.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: aac:Aaci_1662 protein of unknown function DUF2179 YP_003589549.1 PFAM: cytochrome c class I; KEGG: bbe:BBR47_24910 menaquinol-cytochrome c reductase cytochrome b/c subunit YP_003589550.1 PFAM: Cytochrome b/b6 domain; KEGG: bbe:BBR47_24900 menaquinol-cytochrome c reductase cytochrome b subunit YP_003589551.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bay:RBAM_020720 QcrA YP_003589552.1 KEGG: pae:PA2424 peptide synthase YP_003589553.1 PFAM: Protein of unknown function UPF0302; KEGG: aac:Aaci_1663 protein of unknown function UPF0302 YP_003589554.1 KEGG: bbe:BBR47_24860 hypothetical protein YP_003589555.1 KEGG: pjd:Pjdr2_3778 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003589556.1 PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor YP_003589557.1 PFAM: inner-membrane translocator; KEGG: gyc:GYMC61_3056 inner-membrane translocator YP_003589558.1 PFAM: inner-membrane translocator; KEGG: lsp:Bsph_4668 high-affinity branched-chain amino acid transport system permease protein YP_003589559.1 KEGG: gtn:GTNG_2927 putative branched chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589560.1 KEGG: hmo:HM1_0494 branched-chain amino acid abc transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589561.1 KEGG: hmo:HM1_1927 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003589562.1 PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; KEGG: afl:Aflv_1108 prephenate dehydrogenase YP_003589563.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: mta:Moth_1336 tryptophan synthase, alpha chain; PFAM: tryptophan synthase alpha chain YP_003589564.1 KEGG: aac:Aaci_1668 tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003589565.1 KEGG: gym:GYMC10_2212 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003589566.1 KEGG: pzu:PHZ_c1761 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_003589567.1 KEGG: mta:Moth_1340 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003589568.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: gym:GYMC10_2207 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003589569.1 TIGRFAM: chorismate synthase; KEGG: aac:Aaci_1674 chorismate synthase; PFAM: chorismate synthase YP_003589570.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bbe:BBR47_55270 pseudouridine synthase YP_003589571.1 KEGG: gym:GYMC10_2657 general stress protein YP_003589572.1 PFAM: DSBA oxidoreductase; KEGG: cpo:COPRO5265_0036 dithiol-disulfide isomerase YP_003589573.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase YP_003589574.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase YP_003589575.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0674 putative fatty-acid--CoA ligase YP_003589576.1 KEGG: hmu:Hmuk_2913 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_003589577.1 PFAM: MaoC domain protein dehydratase; KEGG: gyc:GYMC61_2956 MaoC domain protein dehydratase YP_003589578.1 PFAM: thioesterase superfamily protein; KEGG: dol:Dole_1498 thioesterase superfamily protein YP_003589579.1 KEGG: nca:Noca_2009 AMP-dependent synthetase and ligase YP_003589580.1 KEGG: sus:Acid_3872 hypothetical protein YP_003589581.1 PFAM: protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein YP_003589582.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbe:BBR47_50020 probable enoyl-CoA hydratase YP_003589583.1 KEGG: bbe:BBR47_35090 putative nuclease precursor; PFAM: nuclease (SNase domain protein); Excalibur domain protein; SMART: nuclease (SNase domain protein) YP_003589584.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003589585.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003589586.1 PFAM: transposase IS3/IS911 family protein; KEGG: pth:PTH_2416 hypothetical protein YP_003589588.1 PFAM: restriction endonuclease; KEGG: ava:Ava_B0091 restriction endonuclease YP_003589589.1 PFAM: protein of unknown function DUF45; KEGG: bcr:BCAH187_A1102 zinc metalloprotease YP_003589590.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: hor:Hore_04460 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase YP_003589591.1 PFAM: restriction modification system DNA specificity domain; KEGG: ava:Ava_1158 restriction modification system DNA specificity subunit YP_003589592.1 KEGG: rci:RCIX973 type I restriction modification system, methyltransferase subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase YP_003589593.1 PFAM: copper amine oxidase domain protein; KEGG: pth:PTH_0265 hypothetical protein YP_003589594.1 PFAM: protein of unknown function DUF820; KEGG: tpd:Teth39_2031 hypothetical protein YP_003589595.1 PFAM: MCP methyltransferase CheR-type; KEGG: bbe:BBR47_24690 chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type YP_003589596.1 PFAM: Patatin; KEGG: aac:Aaci_1690 patatin YP_003589597.1 PFAM: nucleoside diphosphate kinase; KEGG: aac:Aaci_1691 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003589598.1 KEGG: gtn:GTNG_2144 component II of heptaprenyl diphosphate synthase; PFAM: Polyprenyl synthetase YP_003589599.1 KEGG: gym:GYMC10_5103 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003589600.1 PFAM: protein of unknown function DUF178; KEGG: bbe:BBR47_24660 putative menaquinone biosynthesis protein YP_003589601.1 KEGG: aae:aq_648 hypothetical protein YP_003589602.1 KEGG: gym:GYMC10_2202 3-octaprenyl-4- hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy- lyase; PFAM: flavoprotein YP_003589603.1 KEGG: bbe:BBR47_24630 putative menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_003589604.1 PFAM: Heptaprenyl diphosphate synthase subunit 1; KEGG: bbe:BBR47_24620 heptaprenyl diphosphate synthase component I YP_003589605.1 KEGG: rle:pRL90277 putative cytochrome bd-related ABC transport ATP-binding protein YP_003589606.1 PFAM: tryptophan RNA-binding attenuator protein; KEGG: bbe:BBR47_24610 transcription attenuation protein YP_003589607.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbe:BBR47_25890 acetyl-CoA synthetase YP_003589608.1 KEGG: aac:Aaci_1697 stage IV sporulation protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A YP_003589609.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: gka:GK2420 lipoate protein ligase YP_003589610.1 KEGG: aac:Aaci_1698 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_003589611.1 KEGG: bbe:BBR47_24500 glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_003589612.1 PFAM: protein of unknown function DUF205; KEGG: gym:GYMC10_2185 protein of unknown function DUF205 YP_003589613.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: aac:Aaci_1701 ribosome-associated GTPase EngA; SMART: AAA ATPase YP_003589614.1 KEGG: tte:TTE1621 hypothetical protein YP_003589615.1 KEGG: xcv:XCV2141 protein kinase YP_003589616.1 KEGG: cti:RALTA_A0875 conserved hypothetical protein, DUF6; putative transmembrane protein YP_003589617.1 PFAM: RNA binding S1 domain protein; KEGG: bcl:ABC1874 30S ribosomal protein S1 YP_003589618.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: sth:STH1669 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003589619.1 KEGG: hmo:HM1_1928 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase YP_003589620.1 KEGG: cce:Ccel_1732 hypothetical protein YP_003589621.1 KEGG: dhd:Dhaf_0071 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003589622.1 KEGG: bcy:Bcer98_1896 spore germination YpeB; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4 YP_003589623.1 KEGG: gka:GK2231 sporulation specific N- acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme); TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan- binding domain 1 protein YP_003589624.1 KEGG: aac:Aaci_1710 hypothetical protein YP_003589625.1 KEGG: gyc:GYMC61_1045 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase YP_003589626.1 PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter YP_003589627.1 KEGG: sth:STH2643 putative (2R)-phospho-3- sulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA YP_003589628.1 PFAM: protein of unknown function DUF441; KEGG: bbe:BBR47_23170 hypothetical protein YP_003589629.1 PFAM: Negative regulator of genetic competence; KEGG: aac:Aaci_1712 negative regulator of genetic competence YP_003589630.1 PFAM: UvrD/REP helicase; KEGG: aac:Aaci_1715 UvrD/REP helicase YP_003589631.1 KEGG: bbe:BBR47_40690 hypothetical protein YP_003589632.1 KEGG: pth:PTH_1320 suppresse phage shock protein A YP_003589633.1 PFAM: metallophosphoesterase; KEGG: aac:Aaci_1716 metallophosphoesterase YP_003589634.1 TIGRFAM: GTP cyclohydrolase I; KEGG: bbe:BBR47_24590 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003589635.1 KEGG: aac:Aaci_0346 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; Fibronectin type III domain protein YP_003589636.1 KEGG: bcq:BCQ_5012 cold shock protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003589637.1 KEGG: sth:STH230 glutamate synthase large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_003589638.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aac:Aaci_1719 HtrA2 peptidase YP_003589639.1 KEGG: gsu:GSU1308 hypothetical protein YP_003589641.1 KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003589642.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gem:GM21_3612 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003589643.1 KEGG: aac:Aaci_1723 hypothetical protein YP_003589644.1 KEGG: gym:GYMC10_3932 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003589646.1 PFAM: Silent information regulator protein Sir2; KEGG: aac:Aaci_1724 silent information regulator protein Sir2 YP_003589647.1 PFAM: protein of unknown function DUF466; KEGG: bbe:BBR47_43380 hypothetical protein YP_003589648.1 PFAM: carbon starvation protein CstA; KEGG: gka:GK0612 carbon starvation protein YP_003589649.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: bbe:BBR47_24220 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003589650.1 PFAM: thiazole biosynthesis family protein; KEGG: bbe:BBR47_31030 thiazole biosynthesis protein ThiG YP_003589651.1 KEGG: afl:Aflv_2314 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003589652.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: cag:Cagg_3166 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003589653.1 PFAM: CoA-binding domain protein; KEGG: dae:Dtox_0803 CoA-binding domain protein YP_003589654.1 KEGG: gym:GYMC10_1854 hypothetical protein YP_003589655.1 PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: bay:RBAM_014660 YlaJ YP_003589656.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: aac:Aaci_1727 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003589657.1 KEGG: aac:Aaci_1728 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003589658.1 KEGG: adg:Adeg_1292 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003589659.1 KEGG: pjd:Pjdr2_2362 nucleoside recognition domain protein YP_003589660.1 PFAM: nucleoside recognition domain protein; KEGG: gym:GYMC10_2159 nucleoside recognition domain protein YP_003589661.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: pjd:Pjdr2_2360 peptidase S11 D-alanyl-D- alanine carboxypeptidase 1 YP_003589662.1 KEGG: aac:Aaci_1733 sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ YP_003589663.1 KEGG: aac:Aaci_1734 hypothetical protein YP_003589664.1 KEGG: bbe:BBR47_24090 segregation and condensation protein B; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003589665.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bbe:BBR47_24080 segregation and condensation protein A YP_003589666.1 PFAM: peptidase M50; KEGG: bbe:BBR47_24070 peptidase M50 family protein YP_003589667.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: tpd:Teth39_0024 riboflavin synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003589668.1 KEGG: gyc:GYMC61_0387 3,4-dihydroxy-2-butanone 4- phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003589669.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: dau:Daud_0624 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_003589670.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: mta:Moth_0915 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003589671.1 KEGG: aac:Aaci_0663 peptidase S11 D-alanyl-D- alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003589672.1 KEGG: gwc:GWCH70_2242 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003589673.1 KEGG: bha:BH1570 sporulation protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein YP_003589674.1 KEGG: gym:GYMC10_1703 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein YP_003589675.1 KEGG: aac:Aaci_1743 stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_003589676.1 KEGG: bld:BLi02493 SpoVAB YP_003589677.1 KEGG: gka:GK2307 stage V sporulation protein AA YP_003589678.1 KEGG: aac:Aaci_1744 RNA polymerase, sigma 28 subunit, SigF; TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003589679.1 SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: aac:Aaci_1745 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein YP_003589680.1 KEGG: gym:GYMC10_2141 anti-sigma-factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti- sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_003589681.1 KEGG: dth:DICTH_0605 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; SMART: AAA ATPase YP_003589682.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: adg:Adeg_1105 binding-protein-dependent transport systems inner membrane component YP_003589683.1 KEGG: mta:Moth_0863 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003589684.1 KEGG: aac:Aaci_1297 DivIVA domain protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_003589685.1 PFAM: protein of unknown function YGGT; KEGG: gym:GYMC10_1830 protein of unknown function YGGT YP_003589686.1 PFAM: protein of unknown function DUF552; KEGG: pjd:Pjdr2_3877 protein of unknown function DUF552 YP_003589687.1 PFAM: alanine racemase domain protein; KEGG: bha:BH2550 hypothetical protein YP_003589688.1 PFAM: protein of unknown function DUF152; KEGG: chy:CHY_2048 hypothetical protein YP_003589689.1 KEGG: aac:Aaci_1292 sporulation protein, YlmC/YmxH family; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_003589690.1 KEGG: gym:GYMC10_1825 RNA polymerase, sigma 28 subunit, SigG; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003589691.1 KEGG: pjd:Pjdr2_3882 RNA polymerase, sigma 28 subunit, SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_003589692.1 PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: pjd:Pjdr2_3883 sigma-E processing peptidase SpoIIGA YP_003589693.1 KEGG: aac:Aaci_1288 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003589694.1 KEGG: aac:Aaci_1287 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003589695.1 PFAM: protein of unknown function DUF1290; KEGG: lsp:Bsph_1438 small basic protein YP_003589696.1 PFAM: protein of unknown function DUF881; KEGG: tte:TTE1642 hypothetical protein YP_003589697.1 PFAM: protein of unknown function DUF881; KEGG: aac:Aaci_1284 protein of unknown function DUF881 YP_003589698.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: aac:Aaci_1283 polypeptide-transport- associated domain protein FtsQ-type YP_003589699.1 KEGG: pjd:Pjdr2_3888 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003589700.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: aac:Aaci_1278 UDP-N- acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003589701.1 TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; KEGG: bay:RBAM_015080 undecaprenyldiphospho- muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_003589702.1 KEGG: aac:Aaci_1276 stage V sporulation protein E; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein YP_003589703.1 KEGG: gka:GK1118 UDP-N-acetylmuramoyl-L-alanyl-D- glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003589704.1 TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; KEGG: aac:Aaci_1274 phospho-N-acetylmuramoyl- pentapeptide-transferas E; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003589705.1 KEGG: pjd:Pjdr2_3894 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003589706.1 SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: aac:Aaci_1272 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein YP_003589707.1 KEGG: aac:Aaci_1271 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein YP_003589708.1 TIGRFAM: cell division protein FtsL; KEGG: saq:Sare_3445 hypothetical protein YP_003589709.1 KEGG: hmo:HM1_2051 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003589710.1 KEGG: gym:GYMC10_1807 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_003589711.1 KEGG: erythrocyte membrane-associated antigen YP_003589712.1 KEGG: gwc:GWCH70_1836 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_003589713.1 PFAM: pyruvate carboxyltransferase; KEGG: bbe:BBR47_38570 hydroxymethylglutaryl-CoA lyase YP_003589714.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: adg:Adeg_0287 short-chain dehydrogenase/reductase SDR YP_003589715.1 KEGG: tth:TTC1272 HesB protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003589716.1 KEGG: ssp:SSP0242 ABC-type amino acid transport system periplasmic component YP_003589717.1 KEGG: pjd:Pjdr2_3918 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003589718.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gym:GYMC10_2409 haloacid dehalogenase domain protein hydrolase YP_003589719.1 KEGG: bmr:BMI_II1181 branched chain amino acid ABC transporter, ATP-binding/permease protein YP_003589720.1 PFAM: helix-turn-helix HxlR type; KEGG: amu:Amuc_0802 transcriptional regulator, HxlR family YP_003589721.1 PFAM: GLUG domain protein; KEGG: hwa:HQ1081A halomucin YP_003589722.1 KEGG: aac:Aaci_2998 hypothetical protein YP_003589723.1 KEGG: aac:Aaci_2807 hypothetical protein YP_003589725.1 PFAM: S-layer domain protein; regulator of chromosome condensation RCC1; KEGG: geo:Geob_2704 cytochrome c family protein YP_003589726.1 KEGG: drm:Dred_1845 two component transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003589727.1 KEGG: zgc:101095 YP_003589728.1 KEGG: gka:GK1079 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl- phosphate synthase L chain ATP-binding; Carbamoyl- phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein YP_003589729.1 KEGG: METRNL; meteorin, glial cell differentiation regulator-like YP_003589730.1 TIGRFAM: transcription factor, RsfA family; KEGG: pjd:Pjdr2_3907 transcription factor, RsfA family YP_003589732.1 KEGG: mta:Moth_0198 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein YP_003589733.1 KEGG: hor:Hore_22050 aminotransferase class V; PFAM: aminotransferase class V YP_003589734.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003589735.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003589736.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bbe:BBR47_14090 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003589737.1 PFAM: protein of unknown function DUF185; KEGG: gbm:Gbem_2793 protein of unknown function DUF185 YP_003589738.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: aac:Aaci_1260 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003589739.1 KEGG: aac:Aaci_1258 hypothetical protein YP_003589740.1 KEGG: ftm:FTM_1235 isochorismatase hydrolase family protein YP_003589741.1 KEGG: Dlc1; deleted in liver cancer 1 YP_003589742.1 KEGG: hau:Haur_3703 peptidase S16 lon domain- containing protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein YP_003589743.1 PFAM: conserved hypothetical protein; KEGG: aac:Aaci_1257 hypothetical protein YP_003589744.1 KEGG: hypothetical protein LOC100264112 YP_003589746.1 PFAM: protein of unknown function DUF1333; KEGG: bha:BH2371 hypothetical protein YP_003589747.1 PFAM: protein of unknown function DUF1292; KEGG: dhd:Dhaf_3561 protein of unknown function DUF1292 YP_003589748.1 KEGG: zinc finger protein 62 YP_003589749.1 KEGG: aac:Aaci_0085 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_003589750.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: dsy:DSY4105 hypothetical protein YP_003589751.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: bbe:BBR47_49260 hypothetical protein YP_003589752.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: dhd:Dhaf_1346 CobB/CobQ domain protein glutamine amidotransferase YP_003589753.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: adg:Adeg_0443 domain of unknown function DUF1727 YP_003589754.1 KEGG: aac:Aaci_1220 anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003589755.1 KEGG: gem:GM21_2261 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003589756.1 PFAM: Ferritin Dps family protein; KEGG: aac:Aaci_0703 ferritin Dps family protein YP_003589757.1 KEGG: aac:Aaci_1860 hypothetical protein YP_003589758.1 PFAM: ferric-uptake regulator; KEGG: ser:SERP1398 FUR family transcriptional regulator YP_003589759.1 PFAM: 3D domain protein; KEGG: pjd:Pjdr2_4889 3D domain protein YP_003589760.1 KEGG: dae:Dtox_2380 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein YP_003589761.1 KEGG: amt:Amet_4225 sporulation stage V, protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_003589762.1 PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: afl:Aflv_2082 hypothetical protein YP_003589763.1 PFAM: protein of unknown function DUF1657; KEGG: bbe:BBR47_41060 hypothetical protein YP_003589764.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gtn:GTNG_0182 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003589765.1 KEGG: gtn:GTNG_0183 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003589766.1 KEGG: gtn:GTNG_2175 CotJA protein YP_003589767.1 KEGG: gwc:GWCH70_2188 CotJB protein YP_003589768.1 KEGG: bld:BLi01147 CotJC; PFAM: manganese containing catalase YP_003589769.1 KEGG: gka:GK2231 sporulation specific N- acetylmuramoyl-L-alanine amidase (spore cortex-lytic enzyme); TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan- binding domain 1 protein YP_003589770.1 PFAM: lipolytic protein G-D-S-L family; KEGG: esi:Exig_1074 GDSL family lipase YP_003589771.1 PFAM: GerA spore germination protein; KEGG: afl:Aflv_0893 stage V sporulation protein AF YP_003589772.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: aac:Aaci_1017 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel YP_003589773.1 KEGG: bbe:BBR47_14030 putative N-acetylmuramoyl-L- alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003589774.1 PFAM: Protein of unknown function DUF2062; KEGG: cyb:CYB_2148 hypothetical protein YP_003589775.1 KEGG: aac:Aaci_0322 ornithine aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III YP_003589776.1 KEGG: hla:Hlac_0431 glutamyl-tRNA(Gln) amidotransferase, B subunit YP_003589777.1 KEGG: adg:Adeg_0019 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003589778.1 KEGG: hypothetical protein YP_003589779.1 PFAM: Bifunctional DNA primase/polymerase ; Primase 1; KEGG: pth:PTH_2505 hypothetical protein YP_003589780.1 KEGG: cph:Cpha266_1624 hypothetical protein YP_003589781.1 KEGG: hypothetical protein YP_003589782.1 KEGG: hypothetical protein YP_003589784.1 KEGG: hypothetical protein LOC100167645 YP_003589785.1 KEGG: gka:GK0521 hypothetical protein; TIGRFAM: phage transcriptional regulator, ArpU family; PFAM: Sigma-70 region 4 type 2 YP_003589786.1 KEGG: swi:Swit_1877 short chain dehydrogenase YP_003589787.1 KEGG: ere:EUBREC_3601 DNA recombinase, putative YP_003589789.1 KEGG: nfa:nfa45640 putative transcriptional regulator YP_003589791.1 PFAM: integrase family protein; KEGG: adg:Adeg_1994 integrase family protein YP_003589792.1 PFAM: protein of unknown function DUF881; KEGG: aac:Aaci_1284 protein of unknown function DUF881 YP_003589793.1 KEGG: lba:Lebu_0886 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589794.1 PFAM: inner-membrane translocator; KEGG: hor:Hore_19980 inner-membrane translocator YP_003589795.1 PFAM: protein of unknown function DUF534; KEGG: ckr:CKR_0548 hypothetical protein YP_003589796.1 KEGG: nth:Nther_2223 cold-shock DNA-binding protein family; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003589797.1 KEGG: bld:BLi02860 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003589798.1 PFAM: polysaccharide deacetylase; KEGG: bbe:BBR47_48720 hypothetical protein YP_003589799.1 SMART: ATP-binding region ATPase domain protein; TIGRFAM: PAS sensor protein; KEGG: pol:Bpro_4297 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein YP_003589800.1 KEGG: aac:Aaci_0516 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003589801.1 PFAM: UspA domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: hmo:HM1_0423 metal dependent phosphohydrolase, putative YP_003589802.1 KEGG: gym:GYMC10_5465 ABC transporter related protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_003589803.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0252 binding-protein-dependent transport systems inner membrane component YP_003589804.1 PFAM: NLPA lipoprotein; KEGG: tpd:Teth39_1334 YaeC family lipoprotein YP_003589806.1 KEGG: afo:Afer_1278 hypothetical protein YP_003589807.1 KEGG: ace:Acel_0821 SMC domain-containing protein YP_003589808.1 PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_1602 hypothetical protein YP_003589809.1 KEGG: sae:NWMN_2458 heavy metal-binding protein; TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein YP_003589810.1 PFAM: protein of unknown function DUF156; KEGG: aac:Aaci_1112 protein of unknown function DUF156 YP_003589811.1 PFAM: galactose-1-phosphate uridyl transferase domain protein; KEGG: mma:MM_0586 sulfate adenylyltransferase YP_003589812.1 KEGG: reu:Reut_B4026 CBS:protein of unknown function DUF21:transporter-associated region YP_003589813.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK2753 3-ketoacyl-(acyl-carrier-protein) reductase YP_003589814.1 KEGG: swo:Swol_1031 hypothetical protein; TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003589815.1 KEGG: btl:BALH_1413 thermostable carboxypeptidase 1; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase YP_003589816.1 TIGRFAM: glutaredoxin-like domain protein; KEGG: aac:Aaci_2537 glutaredoxin-like domain protein YP_003589817.1 PFAM: protein of unknown function DUF423; KEGG: bcl:ABC3922 hypothetical protein YP_003589818.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: sth:STH930 glutamate synthetase YP_003589819.1 KEGG: sth:STH931 hypothetical protein YP_003589820.1 PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; KEGG: aac:Aaci_0886 CoA-binding domain protein YP_003589821.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gwc:GWCH70_0811 Glu/Leu/Phe/Val dehydrogenase YP_003589822.1 KEGG: pjd:Pjdr2_0576 hypothetical protein YP_003589823.1 KEGG: gyc:GYMC61_3326 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003589824.1 KEGG: afw:Anae109_3643 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_003589825.1 SMART: Protein-tyrosine phosphatase, low molecular weight; TIGRFAM: arsenate reductase (thioredoxin); KEGG: aac:Aaci_0537 arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight YP_003589826.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gtn:GTNG_2972 thioredoxin reductase-like protein YP_003589827.1 PFAM: Beta-ketoacyl synthase; KEGG: reu:Reut_C6295 thiolase YP_003589828.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; asparagine synthase; KEGG: bcl:ABC4036 glycolate oxidase iron-sulfur subunit YP_003589829.1 PFAM: FAD linked oxidase domain protein; KEGG: bcl:ABC4037 glycolate oxidase subunit YP_003589830.1 KEGG: bcl:ABC4039 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003589831.1 KEGG: gtn:GTNG_3365 hypothetical protein YP_003589832.1 PFAM: UbiA prenyltransferase; KEGG: gtn:GTNG_3366 1,4-dihydroxy-2-naphthodate octaprenyltransferase-like protein YP_003589833.1 KEGG: bcq:BCQ_4732 sporulation inhibitor KapD; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003589834.1 KEGG: gyc:GYMC61_2826 adenine deaminase; PFAM: amidohydrolase YP_003589835.1 PFAM: SNARE associated Golgi protein; KEGG: aac:Aaci_0972 SNARE associated Golgi protein YP_003589836.1 PFAM: isochorismatase hydrolase; KEGG: gym:GYMC10_1699 isochorismatase hydrolase YP_003589837.1 KEGG: gym:GYMC10_1698 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_003589838.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_1697 binding-protein-dependent transport systems inner membrane component YP_003589839.1 KEGG: gym:GYMC10_1696 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589840.1 KEGG: Tnxb; tenascin XB ; K06252 tenascin YP_003589841.1 PFAM: Creatininase; KEGG: sco:SCO6654 hypothetical protein YP_003589842.1 PFAM: amidohydrolase; KEGG: cbt:CLH_0589 hydroxydechloroatrazine ethylaminohydrolase YP_003589843.1 TIGRFAM: adenosine deaminase; KEGG: chl:Chy400_0540 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_003589844.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bha:BH0749 4-hydroxybenzoyl-CoA reductase YP_003589845.1 KEGG: bha:BH0748 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003589846.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bha:BH0747 hypothetical protein YP_003589847.1 PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_3320 inner-membrane translocator YP_003589848.1 PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_3321 inner-membrane translocator YP_003589849.1 KEGG: pjd:Pjdr2_3322 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589850.1 PFAM: basic membrane lipoprotein; KEGG: pjd:Pjdr2_3323 basic membrane lipoprotein YP_003589851.1 PFAM: amidohydrolase; KEGG: pjd:Pjdr2_3326 S-adenosylhomocysteine deaminase YP_003589852.1 KEGG: azo:azo1184 putative transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin YP_003589853.1 TIGRFAM: urate oxidase; KEGG: bha:BH0759 uricase; PFAM: Uricase YP_003589854.1 KEGG: sus:Acid_0358 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_003589855.1 PFAM: purine catabolism PurC domain protein; KEGG: bha:BH0757 hypothetical protein YP_003589856.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: gtn:GTNG_3186 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003589857.1 KEGG: azc:AZC_0793 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003589858.1 KEGG: bha:BH2309 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase YP_003589859.1 KEGG: aac:Aaci_2892 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003589860.1 PFAM: nitrogen regulatory protein P-II; KEGG: aac:Aaci_2893 nitrogen regulatory protein P- II YP_003589861.1 KEGG: rca:Rcas_0132 hypothetical protein YP_003589862.1 KEGG: rca:Rcas_0129 amino acid permease-associated region YP_003589863.1 KEGG: hla:Hlac_3248 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family YP_003589864.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bra:BRADO6795 putative agmatine ureohydrolase YP_003589865.1 KEGG: aac:Aaci_0933 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003589866.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: geo:Geob_0968 alcohol dehydrogenase GroES domain protein YP_003589867.1 PFAM: amidohydrolase 2; KEGG: gme:Gmet_2218 amidohydrolase 2 YP_003589869.1 PFAM: acyltransferase 3; KEGG: aac:Aaci_0723 acyltransferase 3 YP_003589870.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: bra:BRADO4348 putative methane/phenol/toluene monooxygenase (A subunit, beta chain) YP_003589871.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: msl:Msil_1648 monooxygenase component MmoB/DmpM YP_003589872.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rca:Rcas_4434 alcohol dehydrogenase YP_003589873.1 KEGG: kko:Kkor_1884 hypothetical protein YP_003589874.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dae:Dtox_2961 iron-containing alcohol dehydrogenase YP_003589875.1 KEGG: bbe:BBR47_46530 probable two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003589876.1 KEGG: bha:BH0537 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_003589877.1 TIGRFAM: PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: aac:Aaci_0526 diguanylate cyclase and metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003589878.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: chl:Chy400_2995 nickel-dependent hydrogenase large subunit YP_003589879.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rca:Rcas_3806 NADH ubiquinone oxidoreductase 20 kDa subunit YP_003589880.1 KEGG: rca:Rcas_3807 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_003589881.1 KEGG: chl:Chy400_2999 hydrogenase nickel insertion protein HypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_003589882.1 KEGG: sru:SRU_0318 hypothetical protein YP_003589883.1 KEGG: bbe:BBR47_44110 putative heme-based signal transducer protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003589884.1 PFAM: S-layer domain protein; KEGG: tte:TTE0861 hypothetical protein YP_003589885.1 PFAM: transposase IS605 OrfB; KEGG: hwa:HQ2051A IS1341-type transposase YP_003589886.1 PFAM: transposase IS200-family protein; KEGG: cyp:PCC8801_3900 transposase IS200-family protein YP_003589887.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: dps:DP1829 hypothetical protein YP_003589888.1 KEGG: msm:MSMEG_4159 IS6120, transposase YP_003589889.1 KEGG: rca:Rcas_1793 cyclic nucleotide-binding protein YP_003589890.1 PFAM: RimK domain protein ATP-grasp; KEGG: bra:BRADO4372 putative glutathione synthase YP_003589891.1 KEGG: retinal homeobox protein YP_003589892.1 KEGG: chy:CHY_0189 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003589893.1 KEGG: mpt:Mpe_A2125 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003589894.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ttj:TTHA0486 iron-sulfur protein YP_003589895.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rme:Rmet_1308 alcohol dehydrogenase GroES- like protein YP_003589896.1 KEGG: bbt:BBta_1592 hypothetical protein YP_003589897.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bbt:BBta_1593 putative ferredoxin NAD(+) reductase YP_003589898.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: tro:trd_A0923 toluene-4-monooxygenase system protein E YP_003589899.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: fra:Francci3_0214 monooxygenase component MmoB/DmpM YP_003589900.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tro:trd_A0921 toluene-4-monooxygenase system protein C YP_003589901.1 PFAM: Toluene-4-monooxygenase system B; KEGG: tro:trd_A0920 toluene-4-monooxygenase system protein B YP_003589902.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: bbt:BBta_1598 toluene-4-monooxygenase system protein A YP_003589903.1 KEGG: rha:RHA1_ro08079 catechol 2,3 dioxygenase; TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003589904.1 PFAM: ferredoxin; KEGG: ctt:CtCNB1_3625 Na(+)-translocating NADH- quinonereductase subunit F YP_003589905.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rca:Rcas_2414 4-hydroxyphenylacetate 3- hydroxylase YP_003589906.1 KEGG: gbr:Gbro_0235 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003589907.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: art:Arth_2570 flavin reductase domain- containing protein YP_003589908.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: saf:SULAZ_0206 hypothetical protein YP_003589909.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_31260 hypothetical protein YP_003589910.1 PFAM: amino acid permease-associated region; KEGG: rso:RS02383 amino acid transporter transmembrane protein YP_003589911.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbe:BBR47_21120 acetyl-CoA synthetase YP_003589912.1 PFAM: PGAP1 family protein; KEGG: bpu:BPUM_2852 hypothetical protein YP_003589913.1 KEGG: aac:Aaci_0900 cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein YP_003589914.1 KEGG: aha:AHA_0224 hypothetical protein YP_003589915.1 KEGG: gym:GYMC10_5593 hypothetical protein YP_003589916.1 KEGG: gym:GYMC10_5594 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003589917.1 KEGG: pac:PPA0291 hypothetical protein YP_003589918.1 PFAM: protein of unknown function DUF964; KEGG: aac:Aaci_2369 protein of unknown function DUF964 YP_003589919.1 KEGG: gwc:GWCH70_0549 heavy metal translocating P- type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003589920.1 KEGG: bbe:BBR47_03330 probable transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003589921.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: tte:TTE2004 glycerol-3-phosphate responsive antiterminator (mRNA-binding) YP_003589922.1 PFAM: extracellular solute-binding protein family 1; KEGG: mta:Moth_1484 extracellular solute-binding protein YP_003589923.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mta:Moth_1398 xylose isomerase-like TIM barrel YP_003589924.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1483 binding-protein dependent transport system inner membrane protein YP_003589925.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1482 binding-protein dependent transport system inner membrane protein YP_003589926.1 KEGG: gwc:GWCH70_3234 PilT protein domain protein YP_003589927.1 KEGG: gwc:GWCH70_3235 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003589928.1 PFAM: conserved hypothetical protein; KEGG: aac:Aaci_0632 hypothetical protein YP_003589929.1 KEGG: tmz:Tmz1t_0251 transcriptional regulator, XRE family YP_003589930.1 PFAM: HEPN domain protein; KEGG: drm:Dred_0896 HEPN domain-containing protein YP_003589931.1 PFAM: helix-turn-helix domain protein; KEGG: rpf:Rpic12D_4620 transcriptional regulator, XRE family YP_003589932.1 PFAM: Ferritin Dps family protein; KEGG: aac:Aaci_0703 ferritin Dps family protein YP_003589933.1 KEGG: sgr:SGR_7127t putative transposase YP_003589934.1 PFAM: copper amine oxidase domain protein; KEGG: sth:STH2256 hypothetical protein YP_003589935.1 KEGG: similar to GA17399-PA YP_003589936.1 KEGG: fra:Francci3_3430 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_003589937.1 PFAM: Resolvase domain; KEGG: mbt:JTY_0943 putative resolvase YP_003589938.1 KEGG: hor:Hore_16490 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003589939.1 KEGG: gyc:GYMC61_1556 nitric-oxide reductase YP_003589940.1 KEGG: acr:Acry_2422 site-specific DNA- methyltransferase (adenine-specific) YP_003589941.1 KEGG: aac:Aaci_3073 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003589943.1 PFAM: transposase IS3/IS911 family protein; KEGG: pth:PTH_2416 hypothetical protein YP_003589944.1 PFAM: glycosyl transferase family 2; General secretory system II protein E domain protein; KEGG: tro:trd_1121 glycosyl transferase, group 2 family protein YP_003589945.1 KEGG: aac:Aaci_3026 YolD-like protein YP_003589946.1 KEGG: rca:Rcas_1290 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003589947.1 PFAM: transcriptional regulator PadR family protein; KEGG: glo:Glov_0133 transcriptional regulator, PadR- like family YP_003589948.1 PFAM: class II aldolase/adducin family protein; KEGG: afo:Afer_1874 class II aldolase/adducin family protein YP_003589949.1 PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_5004 polysaccharide deacetylase YP_003589950.1 PFAM: polysaccharide deacetylase; KEGG: gym:GYMC10_2424 polysaccharide deacetylase YP_003589951.1 PFAM: Integral membrane protein TerC; KEGG: adg:Adeg_0569 integral membrane protein TerC YP_003589952.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: amt:Amet_1405 phage integrase family protein YP_003589953.1 PFAM: putative transposase; KEGG: rle:pRL110341 putative transposase for insertion sequence element YP_003589954.1 KEGG: afu:AF0673 mercuric resistance operon regulatory protein (MerR); PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003589955.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfl:PFL_3018 enoyl-CoA hydratase YP_003589956.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA2146 putative long-chain-fatty-acid-- CoA ligase YP_003589957.1 KEGG: gyc:GYMC61_3124 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003589958.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: pjd:Pjdr2_0183 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_003589959.1 KEGG: bay:RBAM_030910 YvaK YP_003589960.1 KEGG: bha:BH3555 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003589961.1 TIGRFAM: enolase; KEGG: bbe:BBR47_52350 enolase; PFAM: Enolase-like YP_003589962.1 KEGG: gyc:GYMC61_3134 phosphoglycerate mutase, 2,3- bisphosphoglycerate-independent; TIGRFAM: phosphoglycerate mutase, 2,3- bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_003589963.1 KEGG: pth:PTH_2721 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003589964.1 KEGG: bbe:BBR47_52380 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003589965.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003589966.1 PFAM: putative sugar-binding domain protein; KEGG: bbe:BBR47_52410 central glycolytic genes regulator YP_003589967.1 KEGG: sth:STH239 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003589968.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: aac:Aaci_0740 NADP oxidoreductase coenzyme F420-dependent YP_003589969.1 KEGG: mem:Memar_1498 UvrD/REP helicase; PFAM: UvrD/REP helicase YP_003589970.1 KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like YP_003589971.1 KEGG: MAP2; microtubule-associated protein 2 ; K10430 microtubule-associated protein 2 YP_003589972.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: gym:GYMC10_0182 protein of unknown function DUF199 YP_003589973.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: aac:Aaci_0417 protein of unknown function UPF0052 and CofD YP_003589974.1 PFAM: conserved hypothetical protein; KEGG: bld:BLi03725 hypothetical protein YP_003589975.1 KEGG: pjd:Pjdr2_0168 TPR repeat-containing protein YP_003589976.1 KEGG: aac:Aaci_1954 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003589977.1 KEGG: sil:SPO2877 hypothetical protein YP_003589978.1 KEGG: hypothetical LOC593151 YP_003589979.1 KEGG: mra:MRA_3918 hypothetical protein YP_003589980.1 PFAM: Methyltransferase type 11; KEGG: dhd:Dhaf_2386 methyltransferase type 11 YP_003589981.1 PFAM: AMP-dependent synthetase and ligase; KEGG: oih:OB2666 AMP-binding enzyme YP_003589982.1 PFAM: peptidase M29 aminopeptidase II; KEGG: aac:Aaci_0078 peptidase M29 aminopeptidase II YP_003589983.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbe:BBR47_17150 putative oxidoreductase YP_003589984.1 PFAM: oxidoreductase domain protein; KEGG: bbe:BBR47_17140 putative oxidoreductase YP_003589985.1 PFAM: pyruvate carboxyltransferase; KEGG: gyc:GYMC61_3564 pyruvate carboxyltransferase YP_003589986.1 KEGG: gyc:GYMC61_3563 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003589987.1 PFAM: major facilitator superfamily MFS_1; KEGG: mno:Mnod_0896 major facilitator superfamily MFS_1 YP_003589988.1 KEGG: bcl:ABC0546 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003589989.1 KEGG: gyc:GYMC61_3151 phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase YP_003589990.1 KEGG: tpd:Teth39_0521 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003589991.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: cyh:Cyan8802_0338 phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_003589992.1 KEGG: pjd:Pjdr2_0163 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003589993.1 KEGG: hha:Hhal_1094 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003589994.1 TIGRFAM: histidinol dehydrogenase; KEGG: gyc:GYMC61_3156 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003589995.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: gym:GYMC10_0145 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003589996.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: pjd:Pjdr2_0159 histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S) YP_003589997.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: aac:Aaci_2464 flavin reductase domain protein FMN-binding YP_003589998.1 KEGG: pth:PTH_2862 membrane protein; PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003589999.1 PFAM: membrane protein of unknown function; KEGG: rpf:Rpic12D_3334 membrane protein of unknown function YP_003590000.1 KEGG: aac:Aaci_0411 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003590001.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: aac:Aaci_0410 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003590002.1 KEGG: aac:Aaci_2391 small, acid-soluble spore protein tlp YP_003590003.1 PFAM: OmpA/MotB domain protein; KEGG: aac:Aaci_0409 OmpA/MotB domain protein YP_003590004.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aac:Aaci_0408 MotA/TolQ/ExbB proton channel YP_003590005.1 KEGG: gym:GYMC10_5838 cell division topological determinant; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003590006.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: afl:Aflv_2551 periplasmic protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein YP_003590007.1 PFAM: protein of unknown function DUF214; KEGG: bbe:BBR47_52840 cell division protein FtsX YP_003590008.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: aac:Aaci_0405 cell division ATP-binding protein FtsE; SMART: AAA ATPase YP_003590009.1 KEGG: hypothetical protein YP_003590010.1 PFAM: Urease accessory protein UreD; KEGG: cth:Cthe_1812 urease accessory protein UreD YP_003590011.1 KEGG: pjd:Pjdr2_4324 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_003590012.1 PFAM: Urease accessory protein UreF; KEGG: pjd:Pjdr2_4325 urease accessory protein UreF YP_003590013.1 TIGRFAM: urease, alpha subunit; urease, beta subunit; KEGG: pjd:Pjdr2_4326 urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; Urease beta subunit YP_003590014.1 TIGRFAM: urease, gamma subunit; KEGG: gyc:GYMC61_2773 urease, gamma subunit; PFAM: Urease gamma subunit region YP_003590015.1 PFAM: Ion transport 2 domain protein; KEGG: cno:NT01CX_2089 hypothetical protein YP_003590016.1 KEGG: tro:trd_A0097 medium-chain-fatty-acid--CoA ligase (medium-chain acyl-CoA synthetase) YP_003590017.1 PFAM: S-layer domain protein; KEGG: pth:PTH_1590 hypothetical protein YP_003590019.1 KEGG: gym:GYMC10_5847 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003590020.1 TIGRFAM: argininosuccinate synthase; KEGG: sth:STH2874 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003590021.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: aac:Aaci_1227 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003590022.1 KEGG: adg:Adeg_0373 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003590023.1 KEGG: hmo:HM1_2109 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003590024.1 KEGG: gka:GK2336 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003590025.1 KEGG: gwc:GWCH70_3234 PilT protein domain protein YP_003590027.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: adg:Adeg_1446 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_003590028.1 PFAM: protein of unknown function DUF1470; KEGG: btl:BALH_0860 hypothetical protein YP_003590029.1 KEGG: cbi:CLJ_B1757 hypothetical protein YP_003590030.1 KEGG: vsp:VS_II1023 hypothetical protein YP_003590031.1 KEGG: fslF; G-protein-coupled receptor (GPCR) family protein YP_003590032.1 KEGG: rlt:Rleg2_0352 putative succinoglycan biosynthesis transport protein YP_003590033.1 KEGG: rfe:RF_0015 antitoxin of toxin-antitoxin system StbD; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003590034.1 PFAM: Integrase catalytic region; KEGG: mta:Moth_2229 integrase catalytic subunit YP_003590035.1 KEGG: chy:CHY_1250 ISChy3, orf1 YP_003590036.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: gtn:GTNG_0160 hypothetical protein YP_003590037.1 KEGG: cpe:CPE1368 hypothetical protein; PFAM: Ig domain protein group 2 domain protein; nucleic acid binding OB-fold tRNA/helicase-type; S-layer domain protein; SMART: Ig domain protein group 2 domain protein YP_003590038.1 KEGG: aac:Aaci_2556 transposase IS4 family protein YP_003590039.1 KEGG: dae:Dtox_0135 hypothetical protein YP_003590041.1 PFAM: major facilitator superfamily MFS_1; KEGG: sar:SAR0942 hypothetical protein YP_003590042.1 KEGG: hor:Hore_23440 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003590043.1 KEGG: cbe:Cbei_0406 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_003590044.1 KEGG: stp:Strop_2201 hypothetical protein YP_003590045.1 PFAM: transposase IS4 family protein; KEGG: drm:Dred_3238 transposase, IS4 family protein YP_003590046.1 KEGG: adg:Adeg_0059 phospholipase D (PLD) family protein YP_003590047.1 KEGG: dsy:DSY4418 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003590048.1 KEGG: sth:STH3032 hypothetical protein YP_003590049.1 KEGG: hypothetical protein YP_003590050.1 PFAM: Sporulation protein YtfJ; KEGG: amt:Amet_2930 hypothetical protein YP_003590051.1 PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM3832 putative permease YP_003590052.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gym:GYMC10_6020 cytochrome bd ubiquinol oxidase subunit I YP_003590053.1 KEGG: aac:Aaci_1937 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003590054.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: bsu:BSU38740 ABC membrane transporter (ATP- binding protein) required for cytochrome bd function; SMART: AAA ATPase YP_003590055.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: gym:GYMC10_6017 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; SMART: AAA ATPase YP_003590056.1 KEGG: nth:Nther_2517 hypothetical protein YP_003590057.1 KEGG: nth:Nther_2518 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; helix- turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003590058.1 PFAM: UvrD/REP helicase; KEGG: esi:Exig_0705 UvrD/REP helicase YP_003590059.1 KEGG: sth:STH2726 group II intron-encoding maturase, N-terminally truncated YP_003590060.1 KEGG: rrs:RoseRS_1857 hypothetical protein; PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF324; SMART: Cold shock protein YP_003590061.1 KEGG: rrs:RoseRS_1858 hypothetical protein YP_003590062.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 hypothetical protein YP_003590063.1 PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_3293 hypothetical protein YP_003590064.1 KEGG: rrs:RoseRS_1861 hypothetical protein YP_003590065.1 PFAM: CRISPR-associated protein Cas02710; KEGG: rrs:RoseRS_1862 hypothetical protein YP_003590066.1 KEGG: dvm:DvMF_1760 hypothetical protein YP_003590067.1 PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein YP_003590068.1 KEGG: aac:Aaci_3073 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003590070.1 KEGG: rce:RC1_2567 hypothetical protein YP_003590071.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1971 ABC transporter permease protein YP_003590072.1 KEGG: bbr:BB4363 putative ABC transport proteins, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590073.1 KEGG: sth:STH1969 ABC transporter substrate-binding protein YP_003590074.1 PFAM: protein of unknown function DUF156; KEGG: tel:tlr1576 hypothetical protein YP_003590075.1 KEGG: mac:MA0805 cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003590076.1 PFAM: protein of unknown function DUF1453; KEGG: gym:GYMC10_0629 protein of unknown function DUF1453 YP_003590077.1 PFAM: protein of unknown function DUF1292; KEGG: aac:Aaci_1255 protein of unknown function DUF1292 YP_003590078.1 KEGG: bpm:BURPS1710b_A1645 limonene-1,2-epoxide hydrolase catalytic domain-contain protein YP_003590079.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003590080.1 PFAM: protein of unknown function DUF910; KEGG: ste:STER_0769 hypothetical protein YP_003590081.1 KEGG: bbe:BBR47_40890 pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase YP_003590082.1 PFAM: protein of unknown function DUF1540; KEGG: dae:Dtox_2290 protein of unknown function DUF1540 YP_003590083.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: mta:Moth_2287 acetylornithine aminotransferase; PFAM: aminotransferase class-III YP_003590084.1 KEGG: dhd:Dhaf_3477 hypothetical protein YP_003590085.1 TIGRFAM: acetylglutamate kinase; KEGG: hmo:HM1_1430 acetylglutamate kinase, putative; PFAM: aspartate/glutamate/uridylate kinase YP_003590086.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: pth:PTH_0502 N-acetylglutamate synthase; PFAM: arginine biosynthesis protein ArgJ YP_003590087.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: bbe:BBR47_53030 N-acetyl-gamma-glutamyl- phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_003590088.1 PFAM: Integral membrane protein TerC; KEGG: vap:Vapar_5190 integral membrane protein TerC YP_003590089.1 PFAM: Chromate transporter; KEGG: gym:GYMC10_1271 chromate transporter YP_003590090.1 PFAM: Chromate transporter; KEGG: gym:GYMC10_1272 chromate transporter YP_003590091.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hmo:HM1_1581 integral membrane protein duf6, putative YP_003590092.1 KEGG: mxa:MXAN_0148 hypothetical protein YP_003590093.1 PFAM: metallophosphoesterase; KEGG: mba:Mbar_A0070 phosphoesterase YP_003590094.1 KEGG: hypothetical protein LOC761535 YP_003590095.1 KEGG: bcg:BCG9842_B3550 prolipoprotein diacylglyceryl transferase family protein YP_003590096.1 PFAM: protein of unknown function DUF204; KEGG: dhd:Dhaf_4830 protein of unknown function DUF204 YP_003590097.1 PFAM: glycosyl transferase group 1; KEGG: seh:SeHA_C4044 UDP-D- galactose:(glucosyl)lipopolysaccharide-1,6-D- galactosyltransfe rase YP_003590098.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_4840 glycosyl transferase family protein YP_003590099.1 PFAM: Methyltransferase type 11; KEGG: dau:Daud_1458 methyltransferase type 11 YP_003590100.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2943 major facilitator transporter YP_003590101.1 KEGG: hypothetical protein YP_003590102.1 KEGG: mba:Mbar_A3427 ArsR family transcriptional regulator; PFAM: Rhodanese domain protein; regulatory protein ArsR; SMART: regulatory protein ArsR; Rhodanese domain protein YP_003590103.1 KEGG: chy:CHY_1864 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590104.1 KEGG: chy:CHY_0892 hypothetical protein YP_003590105.1 KEGG: nth:Nther_1810 sporulation protein YunB; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like YP_003590106.1 PFAM: protein of unknown function DUF45; KEGG: cce:Ccel_2307 protein of unknown function DUF45 YP_003590107.1 PFAM: heat shock protein Hsp20; KEGG: bld:BLi02478 hypothetical protein YP_003590108.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein; KEGG: mta:Moth_1709 tyrosyl-tRNA synthetase; SMART: RNA-binding S4 domain protein YP_003590109.1 KEGG: aac:Aaci_2124 glycosyl transferase family 51; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase YP_003590110.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: gyc:GYMC61_0824 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_003590111.1 PFAM: membrane protein of unknown function; KEGG: aac:Aaci_2126 membrane protein of unknown function YP_003590112.1 PFAM: protein of unknown function DUF710; KEGG: bbe:BBR47_16420 Z ring-associated protein YP_003590113.1 KEGG: aac:Aaci_2129 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003590114.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: gtn:GTNG_2633 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003590115.1 KEGG: bha:BH3336 hypothetical protein YP_003590116.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gym:GYMC10_5501 tRNA/rRNA methyltransferase (SpoU) YP_003590117.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: amt:Amet_1637 TrkA domain-containing protein YP_003590118.1 TIGRFAM: potassium uptake protein, TrkH family; KEGG: gyc:GYMC61_1067 potassium uptake protein, TrkH family; PFAM: cation transporter YP_003590119.1 KEGG: gtn:GTNG_2640 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003590120.1 KEGG: gwc:GWCH70_2659 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003590121.1 KEGG: bbe:BBR47_16070 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_003590122.1 KEGG: hmo:HM1_1780 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein YP_003590123.1 KEGG: xca:xccb100_1671 putative Tfp pilus assembly protein YP_003590124.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO5284 hypothetical protein YP_003590125.1 PFAM: thioesterase superfamily protein; KEGG: gka:GK1363 hypothetical protein YP_003590126.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: nth:Nther_2586 transposase IS116/IS110/IS902 family protein YP_003590127.1 KEGG: ttj:TTHA1580 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003590128.1 KEGG: mav:MAV_5082 hypothetical protein YP_003590129.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: swi:Swit_0889 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_003590130.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic- ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: art:Arth_4346 Rieske (2Fe-2S) domain- containing protein YP_003590131.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ttu:TERTU_1262 aromatic ring-opening dioxygenase, catalytic LigB subunit family protein YP_003590132.1 PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: saz:Sama_2383 hypothetical protein YP_003590133.1 PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_3055 alpha/beta hydrolase fold YP_003590134.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: rpf:Rpic12D_1552 Asp/Glu/hydantoin racemase YP_003590135.1 KEGG: similar to CG3108-PA YP_003590136.1 KEGG: gyc:GYMC61_2288 5-carboxymethyl-2- hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003590137.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bha:BH2004 gentisate 1,2-dioxygenase YP_003590138.1 PFAM: Luciferase-like, subgroup; KEGG: tgr:Tgr7_0734 luciferase-like monooxygenase YP_003590139.1 KEGG: rme:Rmet_0082 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003590141.1 KEGG: dhd:Dhaf_0322 transcriptional regulator, AbrB family YP_003590142.1 KEGG: similar to aminocarboxymuconate semialdehyde decarboxylase YP_003590143.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2956 alpha/beta hydrolase YP_003590144.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: tro:trd_A0775 carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) YP_003590145.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: msm:MSMEG_5883 2Fe-2S-binding domain- containing protein YP_003590146.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: tro:trd_0577 carbon monoxide dehydrogenase medium chain YP_003590147.1 KEGG: nca:Noca_0239 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003590148.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: npu:Npun_R0619 short-chain dehydrogenase/reductase SDR YP_003590149.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_A3047 enoyl-CoA hydratase YP_003590150.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1014 enoyl-CoA hydratase/isomerase YP_003590151.1 PFAM: MaoC domain protein dehydratase; KEGG: bpa:BPP0651 hypothetical protein YP_003590152.1 PFAM: Aldehyde Dehydrogenase; KEGG: aac:Aaci_2504 aldehyde dehydrogenase YP_003590153.1 KEGG: tpd:Teth39_1975 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003590154.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sru:SRU_0987 pectin degradation protein YP_003590155.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: tro:trd_A0928 pigment production hydroxylase YP_003590156.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B2964 catechol 2,3-dioxygenase YP_003590157.1 KEGG: bur:Bcep18194_B2964 catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003590158.1 PFAM: ferredoxin; KEGG: lch:Lcho_4353 oxidoreductase FAD/NAD(P)- binding subunit YP_003590159.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: swi:Swit_1879 putative indolepyruvate oxidoreductase subunit B YP_003590160.1 KEGG: nfa:nfa12370 putative indolepyruvate ferredoxin oxidoreductase alpha subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003590161.1 PFAM: NLP/P60 protein; KEGG: cbe:Cbei_2971 NLP/P60 protein YP_003590162.1 PFAM: protein of unknown function DUF820; KEGG: gur:Gura_3383 hypothetical protein YP_003590163.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: aac:Aaci_2211 S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_003590164.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbe:BBR47_38620 hypothetical protein YP_003590165.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: tte:TTE2225 alternative thymidylate synthase YP_003590166.1 KEGG: gym:GYMC10_4599 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003590167.1 PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_0421 peptidase M48, Ste24p YP_003590168.1 KEGG: rpf:Rpic12D_3123 5'-nucleotidase domain protein YP_003590169.1 PFAM: phosphate transporter; KEGG: gwc:GWCH70_2876 phosphate transporter YP_003590170.1 PFAM: Putitive phosphate transport regulator; KEGG: bbe:BBR47_36630 hypothetical protein YP_003590171.1 PFAM: Peptidase M23; KEGG: bay:RBAM_029440 YunA YP_003590172.1 KEGG: gwc:GWCH70_0836 hypothetical protein YP_003590173.1 PFAM: polysaccharide biosynthesis protein; KEGG: bbe:BBR47_01060 hypothetical protein YP_003590174.1 KEGG: dia:Dtpsy_0567 glycosyl transferase family 4 YP_003590175.1 KEGG: hmo:HM1_3104 cbs domain protein, putative; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003590176.1 TIGRFAM: phage holin, LL-H family; KEGG: Nematode cuticle collagen N-terminal domain containing protein YP_003590177.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: gym:GYMC10_5485 small acid-soluble spore protein alpha/beta type YP_003590178.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: aac:Aaci_2221 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase YP_003590179.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gwc:GWCH70_1350 molybdopterin biosynthesis MoaE protein YP_003590180.1 PFAM: thiamineS protein; KEGG: dge:Dgeo_0329 molybdopterin converting factor, subunit 1 YP_003590181.1 KEGG: oih:OB1738 hypothetical protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003590182.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: aeh:Mlg_0678 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003590183.1 KEGG: gwc:GWCH70_1051 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003590184.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: gka:GK0189 NAD-specific glutamate dehydrogenase (NAD-GDH) YP_003590185.1 KEGG: sru:SRU_0234 transcriptional regulator, AbrB family protein YP_003590187.1 KEGG: aac:Aaci_2378 GTP-sensing transcriptional pleiotropic repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein YP_003590188.1 KEGG: bfa:Bfae_26990 protein kinase family protein with PASTA domain; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein YP_003590189.1 KEGG: gym:GYMC10_2275 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003590190.1 KEGG: bbe:BBR47_25320 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003590191.1 PFAM: Coat F domain protein; KEGG: mta:Moth_2016 coat F domain-containing protein YP_003590192.1 KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003590193.1 PFAM: peptidase M50; KEGG: rpf:Rpic12D_2396 peptidase M50 YP_003590194.1 PFAM: type IV pilus assembly PilZ; KEGG: dhd:Dhaf_4131 type IV pilus assembly PilZ YP_003590195.1 KEGG: tfu:Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein YP_003590196.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gyc:GYMC61_1518 transketolase central region YP_003590197.1 KEGG: gyc:GYMC61_1517 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003590198.1 KEGG: bld:BLi00853 hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003590199.1 KEGG: afl:Aflv_1888 hypothetical protein YP_003590201.1 KEGG: xac:XAC0359 glycerol uptake facilitator protein YP_003590202.1 KEGG: tte:TTE1575 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_003590203.1 KEGG: hmo:HM1_2783 ATPase, putative; PFAM: protein of unknown function DUF815; AAA ATPase central domain protein; SMART: AAA ATPase YP_003590204.1 KEGG: sth:STH3230 non-specific DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003590205.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gyc:GYMC61_1803 AMP-dependent synthetase and ligase YP_003590206.1 KEGG: ADR181Wp YP_003590207.1 KEGG: gka:GK2833 16S pseudouridylate synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003590208.1 KEGG: bbe:BBR47_04310 citrate synthase; PFAM: Citrate synthase YP_003590209.1 PFAM: PspA/IM30 family protein; KEGG: bcy:Bcer98_3471 phage shock protein A, PspA YP_003590210.1 PFAM: protein of unknown function DUF350; KEGG: bcq:BCQ_4619 hypothetical protein YP_003590211.1 KEGG: bcy:Bcer98_3469 group-specific protein YP_003590212.1 KEGG: bcg:BCG9842_B0313 putative lipoprotein YP_003590213.1 PFAM: protein of unknown function DUF162; KEGG: pjd:Pjdr2_3760 protein of unknown function DUF162 YP_003590214.1 KEGG: gym:GYMC10_3947 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162 YP_003590215.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: bbe:BBR47_30520 hypothetical protein YP_003590216.1 PFAM: ABC-3 protein; KEGG: dhd:Dhaf_3000 ABC-3 protein YP_003590217.1 KEGG: rca:Rcas_1590 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590218.1 PFAM: periplasmic solute binding protein; KEGG: dhd:Dhaf_2998 periplasmic solute binding protein YP_003590219.1 PFAM: ferric-uptake regulator; KEGG: aac:Aaci_2612 ferric uptake regulator, Fur family YP_003590220.1 KEGG: nfa:nfa23260 putative ABC transporter YP_003590221.1 KEGG: taf:THA_1573 methionyl-tRNA synthetase YP_003590222.1 KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_003590223.1 KEGG: hau:Haur_3843 spermidine synthase-like protein YP_003590224.1 KEGG: aac:Aaci_2605 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590225.1 KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003590226.1 KEGG: col-62; COLlagen YP_003590227.1 KEGG: dae:Dtox_3325 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer YP_003590228.1 PFAM: ROK family protein; KEGG: aac:Aaci_0086 glucokinase, ROK family YP_003590229.1 KEGG: dau:Daud_0168 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_003590230.1 PFAM: Lytic transglycosylase catalytic; KEGG: pjd:Pjdr2_1527 lytic transglycosylase catalytic YP_003590231.1 KEGG: aac:Aaci_2343 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003590232.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: gtn:GTNG_2653 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA- binding; zinc finger Fpg domain protein YP_003590233.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bay:RBAM_020720 QcrA YP_003590234.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: aac:Aaci_2345 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; DNA-directed DNA polymerase YP_003590235.1 PFAM: extracellular solute-binding protein family 5; KEGG: tte:TTE0611 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components YP_003590236.1 TIGRFAM: malate dehydrogenase, NAD-dependent; KEGG: bbe:BBR47_13910 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_003590237.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: aac:Aaci_2348 isocitrate dehydrogenase, NADP- dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003590238.1 KEGG: bbe:BBR47_13840 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region YP_003590239.1 TIGRFAM: 6-phosphofructokinase; KEGG: gyc:GYMC61_0777 6-phosphofructokinase; PFAM: phosphofructokinase YP_003590240.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: bbe:BBR47_13820 acetyl-CoA carboxylase carboxyl transferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_003590241.1 KEGG: aac:Aaci_2354 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_003590242.1 KEGG: aac:Aaci_2355 hypothetical protein YP_003590243.1 KEGG: bld:BLi03071 YtsJ; PFAM: malic protein NAD-binding; malic protein domain protein YP_003590244.1 PFAM: phosphatidylglycerophosphatase A; KEGG: gym:GYMC10_4936 phosphatidylglycerophosphatase A YP_003590245.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; KEGG: bbe:BBR47_13770 DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_003590246.1 KEGG: bbe:BBR47_13720 hypothetical protein; PFAM: DRTGG domain protein; regulatory protein GntR HTH; CBS domain containing protein; thioesterase superfamily protein; SMART: CBS domain containing protein YP_003590247.1 PFAM: thioesterase superfamily protein; KEGG: gym:GYMC10_2149 thioesterase superfamily protein YP_003590248.1 KEGG: aac:Aaci_2366 hypothetical protein YP_003590249.1 KEGG: gwc:GWCH70_1183 hypothetical protein YP_003590250.1 KEGG: aac:Aaci_2368 beta-lactamase domain protein YP_003590251.1 KEGG: cce:Ccel_0643 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; S-layer domain protein; SMART: chitinase II YP_003590252.1 PFAM: protein of unknown function DUF445; KEGG: bha:BH1148 hypothetical protein YP_003590253.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: tro:trd_0363 probable acetolactate synthase large subunit YP_003590254.1 TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: gyc:GYMC61_0658 phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_003590255.1 KEGG: rpe:RPE_2639 filamentous haemagglutinin outer membrane protein YP_003590256.1 KEGG: pjd:Pjdr2_3353 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590257.1 PFAM: transport system permease protein; KEGG: dhd:Dhaf_3251 transport system permease protein YP_003590258.1 PFAM: periplasmic binding protein; KEGG: dsy:DSY2084 hypothetical protein YP_003590259.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase YP_003590260.1 TIGRFAM: helicase, RecD/TraA family; KEGG: dau:Daud_0818 RecD/TraA family helicase; SMART: AAA ATPase YP_003590261.1 KEGG: hmu:Hmuk_2393 hypothetical protein YP_003590262.1 KEGG: gtn:GTNG_0702 oligopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F YP_003590263.1 KEGG: gwc:GWCH70_1892 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003590264.1 KEGG: fnu:FN2002 permease YP_003590265.1 PFAM: chalcone and stilbene synthase domain protein; KEGG: bbe:BBR47_36650 probable naringenin-chalcone synthase YP_003590266.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: hmo:HM1_0405 hypothetical protein YP_003590267.1 KEGG: aac:Aaci_1050 NLP/P60 protein; PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein YP_003590268.1 PFAM: Protein of unknown function DUF1811; KEGG: bsu:BSU08530 hypothetical protein YP_003590269.1 PFAM: protein of unknown function DUF523; KEGG: sth:STH1078 hypothetical protein YP_003590270.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; KEGG: gwc:GWCH70_0842 methylated-DNA/protein- cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding YP_003590271.1 KEGG: chl:Chy400_2345 hypothetical protein YP_003590272.1 PFAM: Acetone carboxylase gamma subunit; KEGG: gwc:GWCH70_1201 acetone carboxylase gamma subunit YP_003590273.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: aeh:Mlg_1030 acetone carboxylase, alpha subunit YP_003590274.1 KEGG: mch:Mchl_5523 5-oxoprolinase (ATP- hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein YP_003590275.1 KEGG: avn:Avin_20940 sigma54-dependent activator protein AcxR; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_003590276.1 KEGG: aac:Aaci_0735 Mn2+/Fe2+ transporter, NRAMP family; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_003590277.1 PFAM: Polysulphide reductase NrfD; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chl:Chy400_3458 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003590278.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: tro:trd_A0628 formate dehydrogenase YP_003590279.1 PFAM: protein of unknown function DUF81; KEGG: bbe:BBR47_28330 hypothetical protein YP_003590280.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: gfo:GFO_1276 periplasmic 5'-nucleotidase YP_003590281.1 KEGG: gvi:glr0348 two-component response regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003590282.1 KEGG: mta:Moth_0446 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003590283.1 KEGG: mta:Moth_0445 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003590284.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: mta:Moth_0443 biotin/lipoate A/B protein ligase YP_003590285.1 KEGG: tth:TTC0149 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_003590286.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase YP_003590287.1 KEGG: afl:Aflv_2346 peroxiredoxin family protein YP_003590288.1 KEGG: fre:Franean1_0402 integrase catalytic region YP_003590289.1 KEGG: bcy:Bcer98_3325 GAF domain-containing protein YP_003590290.1 KEGG: tro:trd_0158 hypothetical protein YP_003590291.1 PFAM: SirA family protein; KEGG: tro:trd_0160 uncharacterized protein family UPF0033 YP_003590292.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: tro:trd_0142 hypothetical protein YP_003590293.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_944 glycine cleavage system protein H YP_003590294.1 PFAM: glycine cleavage H-protein; KEGG: tro:trd_0144 GcvH YP_003590295.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: mei:Msip34_2458 protein of unknown function DUF224 cysteine-rich region domain protein YP_003590296.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: cts:Ctha_0131 electron transfer flavoprotein alpha subunit YP_003590297.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: tro:trd_0149 electron transfer flavoprotein subunit beta YP_003590298.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: tro:trd_0150 iron-sulfur cluster-binding protein YP_003590299.1 KEGG: tro:trd_0151 hypothetical protein YP_003590300.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cts:Ctha_0136 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003590301.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: tro:trd_0154 hypothetical protein YP_003590302.1 KEGG: afo:Afer_0964 hypothetical protein YP_003590303.1 PFAM: SpoVR family protein; KEGG: bbe:BBR47_11690 stage V sporulation protein R YP_003590304.1 KEGG: bbe:BBR47_10830 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444 YP_003590305.1 KEGG: aac:Aaci_0460 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_003590306.1 KEGG: gym:GYMC10_5475 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein YP_003590307.1 KEGG: fno:Fnod_1559 alanine racemase YP_003590308.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bsu:BSU03350 putative metal uptake system lipoprotein YP_003590309.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dau:Daud_0172 hydrolase YP_003590310.1 PFAM: purine or other phosphorylase family 1; KEGG: pth:PTH_0210 purine nucleoside phosphorylase YP_003590311.1 KEGG: chy:CHY_1122 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003590312.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sth:STH749 two-component sensor kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003590313.1 KEGG: sth:STH2007 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003590314.1 KEGG: tro:trd_1863 [NiFe] hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein YP_003590315.1 PFAM: glutaredoxin; KEGG: tro:trd_1864 glutaredoxin 3 YP_003590316.1 KEGG: tro:trd_1865 phosphoheptose isomerase YP_003590317.1 KEGG: tro:trd_1866 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003590318.1 KEGG: sae:NWMN_2595 high-affinity nickel transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_003590319.1 KEGG: tro:trd_1867 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_003590320.1 KEGG: tro:trd_1868 hydrogenase maturation factor YP_003590321.1 KEGG: min:Minf_1796 [NiFe] hydrogenase metallocenter assembly protein HypC; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_003590322.1 PFAM: NHL repeat containing protein; KEGG: cag:Cagg_0477 NHL repeat containing protein YP_003590323.1 PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] iron-sulphur domain; KEGG: gau:GAU_0407 hypothetical protein YP_003590324.1 KEGG: chl:Chy400_2991 hypothetical protein YP_003590325.1 KEGG: rca:Rcas_3801 tetratricopeptide TPR_4 YP_003590326.1 KEGG: rca:Rcas_3803 hydrogenase maturation protease YP_003590327.1 KEGG: rca:Rcas_3804 hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_003590328.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: cag:Cagg_0471 nickel-dependent hydrogenase large subunit YP_003590329.1 KEGG: chl:Chy400_2996 NADH ubiquinone oxidoreductase 20 kDa subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003590330.1 KEGG: aba:Acid345_0924 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_003590331.1 PFAM: protein of unknown function DUF1641; KEGG: chl:Chy400_3000 protein of unknown function DUF1641 YP_003590332.1 KEGG: scl:sce2944 phosphate ABC transporter, permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590333.1 KEGG: aba:Acid345_2974 phosphate ABC transporter inner membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590334.1 KEGG: mta:Moth_0115 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003590335.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: chy:CHY_2116 phosphate ABC transporter, ATP- binding protein PstB; SMART: AAA ATPase YP_003590336.1 KEGG: aac:Aaci_2570 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003590337.1 KEGG: lhk:LHK_00115 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003590338.1 KEGG: scl:sce2946 phosphate ABC transporter, substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003590339.1 KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003590340.1 PFAM: MscS Mechanosensitive ion channel; KEGG: aac:Aaci_2331 MscS mechanosensitive ion channel YP_003590341.1 KEGG: aau:AAur_pTC20143 putative integral membrane protein YP_003590342.1 KEGG: aac:Aaci_0916 aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_003590343.1 PFAM: NUDIX hydrolase; KEGG: oih:OB3112 hypothetical protein YP_003590344.1 KEGG: aac:Aaci_0452 hypothetical protein YP_003590345.1 KEGG: bbe:BBR47_42030 transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003590346.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rxy:Rxyl_2072 isocitrate dehydrogenase (NADP) YP_003590347.1 PFAM: aminoglycoside phosphotransferase; KEGG: aac:Aaci_0449 aminoglycoside phosphotransferase YP_003590348.1 KEGG: aac:Aaci_0447 domain of unknown function DUF1730; PFAM: domain of unknown function DUF1730; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein YP_003590349.1 KEGG: bbe:BBR47_10730 ribonuclease H; PFAM: ribonuclease H YP_003590350.1 KEGG: dau:Daud_1400 membrane lipoprotein lipid attachment site YP_003590351.1 KEGG: lsp:Bsph_0336 hypothetical protein YP_003590352.1 KEGG: hypothetical protein YP_003590353.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: sth:STH2787 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_003590354.1 PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM3832 putative permease YP_003590355.1 PFAM: alpha/beta hydrolase fold; KEGG: nar:Saro_3884 alpha/beta hydrolase fold YP_003590356.1 KEGG: cbb:CLD_0115 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590357.1 PFAM: ABC-2 type transporter; KEGG: cpc:Cpar_1860 ABC-2 type transporter YP_003590358.1 KEGG: npu:Npun_F4671 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590359.1 KEGG: bbe:BBR47_16860 putative transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003590360.1 KEGG: ckr:CKR_0286 hypothetical protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003590361.1 PFAM: Camphor resistance CrcB protein; KEGG: hmo:HM1_0794 CrcB protein, putative YP_003590362.1 KEGG: chy:CHY_1740 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003590363.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aac:Aaci_0157 short-chain dehydrogenase/reductase SDR YP_003590364.1 PFAM: protein of unknown function DUF488; KEGG: gtn:GTNG_3199 hypothetical protein YP_003590365.1 PFAM: nitroreductase; KEGG: ton:TON_0855 NAD(P)H oxidase YP_003590366.1 PFAM: Acetamidase/Formamidase; KEGG: gyc:GYMC61_2184 acetamidase/formamidase YP_003590367.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: afw:Anae109_3504 hemerythrin HHE cation binding domain-containing protein YP_003590368.1 PFAM: PilT protein domain protein; KEGG: aac:Aaci_2996 PilT protein domain protein YP_003590369.1 KEGG: avi:Avi_3606 regulators of stationary/sporulation gene expression protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003590370.1 KEGG: gka:GK0765 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003590371.1 KEGG: fsu:Fisuc_3041 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003590372.1 KEGG: gtn:GTNG_0639 hypothetical protein YP_003590373.1 KEGG: afl:Aflv_0826 transcriptional regulator, Crp family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003590374.1 KEGG: rlg:Rleg_4164 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590375.1 KEGG: tna:CTN_0071 amino acid ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590376.1 KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590377.1 KEGG: bln:Blon_0760 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003590378.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pth:PTH_0619 small-conductance mechanosensitive channel YP_003590379.1 PFAM: FeoA family protein; KEGG: vvy:VV1040 Fe2+ transport system protein A YP_003590380.1 KEGG: gyc:GYMC61_2658 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein YP_003590381.1 KEGG: pgn:PGN_1086 hypothetical protein YP_003590382.1 KEGG: tne:Tneu_1863 cupin 2 domain-containing protein YP_003590383.1 KEGG: bam:Bamb_5224 DNA helicase related protein YP_003590384.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BSU21450 putative glycosyltransferase YP_003590385.1 KEGG: bbe:BBR47_24180 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003590386.1 PFAM: electron transport protein SCO1/SenC; KEGG: bbe:BBR47_51720 SCO1 protein homolog YP_003590387.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: aba:Acid345_1412 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003590388.1 PFAM: protein of unknown function DUF1054; KEGG: bcy:Bcer98_2662 hypothetical protein YP_003590389.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: hmo:HM1_2792 D-isomer specific 2-hydroxyacid dehydrogenase, nad-binding domain YP_003590390.1 KEGG: cag:Cagg_1114 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003590391.1 KEGG: aac:Aaci_0685 hypothetical protein YP_003590392.1 KEGG: bgl:bglu_1g12000 hypothetical protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_003590393.1 KEGG: swo:Swol_0981 hypothetical protein YP_003590394.1 KEGG: afl:Aflv_1218 cation transport ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003590395.1 KEGG: gwc:GWCH70_1660 blue (type 1) copper domain protein YP_003590396.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: aac:Aaci_2854 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_003590397.1 KEGG: bce:BC4118 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase YP_003590398.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: bsu:BSU30220 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003590399.1 KEGG: bcb:BCB4264_A4230 adenosylmethionine--8-amino- 7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_003590400.1 KEGG: aac:Aaci_0431 transcription factor, RsfA family YP_003590401.1 KEGG: tgr:Tgr7_0684 hypothetical protein YP_003590402.1 PFAM: major facilitator superfamily MFS_1; KEGG: tye:THEYE_A1806 hypothetical protein YP_003590403.1 KEGG: bcq:BCQ_0525 probable integral membrane protein YP_003590404.1 PFAM: Pirin domain protein; KEGG: aac:Aaci_2876 pirin domain protein YP_003590405.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU08650 enoyl-(acyl carrier protein) reductase YP_003590406.1 PFAM: protein of unknown function DUF402; KEGG: gyc:GYMC61_1350 protein of unknown function DUF402 YP_003590407.1 KEGG: aac:Aaci_0429 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_003590408.1 KEGG: gwc:GWCH70_0968 hypothetical protein YP_003590409.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_0333 glycosyl transferase group 1 YP_003590410.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; NUDIX hydrolase; KEGG: bbe:BBR47_10260 probable A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003590411.1 KEGG: gwc:GWCH70_2203 ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003590412.1 KEGG: bte:BTH_II1045 head portal protein YP_003590413.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_5634 protein of unknown function DUF6 transmembrane YP_003590414.1 KEGG: gtn:GTNG_1441 hypothetical protein YP_003590415.1 KEGG: gwc:GWCH70_1938 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_003590416.1 KEGG: aac:Aaci_0733 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_003590417.1 KEGG: gwc:GWCH70_1911 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003590418.1 KEGG: gka:GK0398 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_003590419.1 PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_1383 glycolate oxidase subunit YP_003590420.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: aac:Aaci_2533 protein of unknown function DUF224 cysteine-rich region domain protein YP_003590421.1 PFAM: FAD linked oxidase domain protein; KEGG: aac:Aaci_2534 FAD linked oxidase domain protein YP_003590422.1 PFAM: iron permease FTR1; KEGG: bbe:BBR47_57390 hypothetical protein YP_003590423.1 KEGG: pjd:Pjdr2_0996 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_003590424.1 PFAM: Peptidase M75, Imelysin; KEGG: bsu:BSU38270 lipoprotein binding ferrous or ferric iron for transport YP_003590425.1 KEGG: hypothetical protein YP_003590426.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; KEGG: pjd:Pjdr2_4612 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003590427.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rrs:RoseRS_0825 MobA-like protein-like protein YP_003590428.1 KEGG: cpi:Cpin_4137 xanthine dehydrogenase YP_003590429.1 PFAM: VWA containing CoxE family protein; KEGG: rmr:Rmar_2376 VWA containing CoxE family protein YP_003590430.1 KEGG: mno:Mnod_1752 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003590431.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: tro:trd_1208 carbon monoxide dehydrogenase medium chain YP_003590432.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: tro:trd_1207 oxidoreductase, large chain YP_003590433.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: tro:trd_1206 [2Fe-2S] binding domain protein YP_003590434.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: chl:Chy400_3739 carbon monoxide dehydrogenase subunit G YP_003590435.1 PFAM: major facilitator superfamily MFS_1; KEGG: mem:Memar_0535 major facilitator transporter YP_003590436.1 KEGG: nth:Nther_2335 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_003590437.1 KEGG: bbe:BBR47_18800 hypothetical protein; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003590438.1 KEGG: mta:Moth_0491 hypothetical protein YP_003590439.1 KEGG: drm:Dred_0583 SMC domain-containing protein YP_003590440.1 KEGG: drm:Dred_0582 hypothetical protein YP_003590441.1 KEGG: drm:Dred_0581 hypothetical protein YP_003590442.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbe:BBR47_20980 long-chain-fatty-acid--CoA ligase YP_003590443.1 PFAM: globin; KEGG: afl:Aflv_2119 hemoglobin-like protein YP_003590444.1 PFAM: Auxin Efflux Carrier; KEGG: gym:GYMC10_5171 auxin efflux carrier YP_003590445.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ote:Oter_4195 hydrolase YP_003590446.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bha:BH1938 hypothetical protein YP_003590447.1 KEGG: gwc:GWCH70_1241 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_003590448.1 PFAM: CcmE/CycJ protein; KEGG: hor:Hore_03750 putative cytochrome c-type biogenesis protein CcmE YP_003590449.1 PFAM: cytochrome c assembly protein; KEGG: chy:CHY_1387 putative cytochrome c-type biogenesis protein CcmF YP_003590450.1 PFAM: cytochrome C biogenesis protein; KEGG: chy:CHY_0563 putative cytochrome c biogenesis protein YP_003590451.1 KEGG: chy:CHY_1386 hypothetical protein YP_003590452.1 KEGG: tro:trd_0263 hypothetical protein YP_003590453.1 KEGG: mac:MA1430 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590454.1 PFAM: ABC-2 type transporter; KEGG: chy:CHY_1383 putative heme exporter protein CcmB YP_003590455.1 PFAM: cytochrome c assembly protein; KEGG: tro:trd_1217 heme exporter protein C YP_003590456.1 KEGG: xop:PXO_00243 two-component VirA-like sensor kinase YP_003590457.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gwc:GWCH70_1890 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003590458.1 KEGG: chy:CHY_0094 SPFH domain-containing protein/band 7 family protein YP_003590459.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: aac:Aaci_2593 hypothetical protein YP_003590460.1 KEGG: mucin-associated surface protein (MASP) YP_003590461.1 KEGG: hypothetical protein YP_003590462.1 PFAM: ApbE family lipoprotein; KEGG: rrs:RoseRS_0609 ApbE family lipoprotein YP_003590463.1 KEGG: ote:Oter_1727 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003590464.1 KEGG: afl:Aflv_0280 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003590465.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rxy:Rxyl_2103 YbaK/prolyl-tRNA synthetase associated region YP_003590466.1 PFAM: protein of unknown function DUF1450; KEGG: bcl:ABC3175 hypothetical protein YP_003590467.1 PFAM: HhH-GPD family protein; KEGG: bbe:BBR47_09260 putative DNA-3-methyladenine glycosylase II; SMART: HhH-GPD family protein YP_003590468.1 KEGG: gwc:GWCH70_2704 hypothetical protein YP_003590469.1 KEGG: gym:GYMC10_6092 heavy metal translocating P- type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; copper ion binding protein; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003590470.1 KEGG: aac:Aaci_2479 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003590471.1 KEGG: bha:BH0651 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003590472.1 KEGG: bcy:Bcer98_2909 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590473.1 KEGG: bwe:BcerKBAB4_4075 ABC-2 type transport system permease protein YP_003590474.1 PFAM: protein of unknown function UPF0150; KEGG: chy:CHY_2510 hypothetical protein YP_003590475.1 KEGG: aac:Aaci_2650 CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196 YP_003590476.1 KEGG: aac:Aaci_2651 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_003590477.1 PFAM: CRISPR-associated protein, GSU0054; KEGG: tgr:Tgr7_2439 hypothetical protein YP_003590478.1 KEGG: tgr:Tgr7_2440 hypothetical protein; TIGRFAM: CRISPR-associated protein, GSU0053 family; PFAM: CRISPR-associated protein GSU0053 YP_003590479.1 KEGG: tgr:Tgr7_2441 hypothetical protein YP_003590480.1 TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: tgr:Tgr7_2442 hypothetical protein; SMART: helicase domain protein; DEAD-like helicase YP_003590481.1 PFAM: regulatory protein TetR; KEGG: bbe:BBR47_40920 probable transcriptional regulator YP_003590482.1 KEGG: bcr:BCAH187_A5150 hypothetical protein YP_003590483.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dsy:DSY4234 hypothetical protein YP_003590484.1 KEGG: gwc:GWCH70_2645 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003590485.1 KEGG: swo:Swol_1620 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590486.1 KEGG: aac:Aaci_0653 ABC-2 type transporter YP_003590488.1 PFAM: HicB family protein; KEGG: ana:all5276 HicB protein YP_003590489.1 KEGG: ana:asl5277 HicA protein YP_003590490.1 KEGG: ara:Arad_3001 UDP-N-acetylmuramoyl-L-alanyl-D- glutamyl-L-lysyl-D -alanyl-D-alanine synthetase protein YP_003590491.1 PFAM: amidohydrolase 2; KEGG: bay:RBAM_009100 hypothetical protein YP_003590492.1 PFAM: protein of unknown function UCP012535; KEGG: pjd:Pjdr2_3904 hypothetical protein YP_003590493.1 PFAM: DinB family protein; KEGG: pjd:Pjdr2_3980 DinB family protein YP_003590494.1 KEGG: cai:Caci_0552 hypothetical protein YP_003590495.1 KEGG: importin beta-4 YP_003590496.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: nca:Noca_4827 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003590497.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nca:Noca_4826 short-chain dehydrogenase/reductase SDR YP_003590498.1 KEGG: xau:Xaut_5064 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003590499.1 KEGG: aac:Aaci_0933 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003590500.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: swi:Swit_3047 phytanoyl-CoA dioxygenase YP_003590501.1 KEGG: nca:Noca_4810 methionine synthase (B12- independent) YP_003590502.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: nca:Noca_4810 methionine synthase (B12- independent) YP_003590503.1 KEGG: aac:Aaci_0318 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein YP_003590504.1 KEGG: aac:Aaci_3055 transposase IS4 family protein YP_003590505.1 KEGG: tpd:Teth39_0121 CRISPR-associated Cas family protein YP_003590507.1 TIGRFAM: CRISPR-associated helicase Cas3; CRISPR- associated HD domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: dae:Dtox_4288 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase ; helicase domain protein YP_003590508.1 KEGG: dae:Dtox_4289 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522 YP_003590509.1 KEGG: dae:Dtox_4290 CRISPR-associated protein, CT1132 family; TIGRFAM: CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801 YP_003590510.1 PFAM: CRISPR-associated protein TM1802; KEGG: dae:Dtox_4291 hypothetical protein YP_003590511.1 PFAM: Silent information regulator protein Sir2; KEGG: amt:Amet_1469 silent information regulator protein Sir2 YP_003590512.1 PFAM: YCII-related; KEGG: bid:Bind_1394 YCII-related YP_003590513.1 KEGG: gwc:GWCH70_0314 CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812 YP_003590514.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: drm:Dred_1909 transposase IS116/IS110/IS902 family protein YP_003590515.1 KEGG: pth:PTH_1913 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196 YP_003590516.1 KEGG: tpd:Teth39_0134 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_003590517.1 KEGG: gyc:GYMC61_1187 CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4 YP_003590518.1 TIGRFAM: CRISPR-associated helicase Cas3; PFAM: type III restriction protein res subunit; KEGG: pth:PTH_1916 helicases; SMART: DEAD-like helicase YP_003590519.1 KEGG: dhd:Dhaf_3937 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522 YP_003590520.1 KEGG: pth:PTH_1918 hypothetical protein; TIGRFAM: CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801 YP_003590521.1 KEGG: pth:PTH_1919 hypothetical protein YP_003590522.1 KEGG: dhd:Dhaf_3942 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57 YP_003590523.1 PFAM: Silent information regulator protein Sir2; KEGG: amt:Amet_1469 silent information regulator protein Sir2 YP_003590524.1 PFAM: protein of unknown function DUF16; KEGG: chy:CHY_2008 KID repeat-containing protein YP_003590525.1 KEGG: aoe:Clos_2612 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003590526.1 PFAM: acriflavin resistance protein; KEGG: hor:Hore_05050 acriflavin resistance protein YP_003590527.1 PFAM: regulatory protein TetR; KEGG: aac:Aaci_0022 transcriptional regulator, TetR family YP_003590528.1 PFAM: secretion protein HlyD family protein; KEGG: bbe:BBR47_49630 hypothetical protein YP_003590529.1 KEGG: bbe:BBR47_49620 probable ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590530.1 PFAM: ABC-2 type transporter; KEGG: bbe:BBR47_49610 hypothetical protein YP_003590531.1 KEGG: pjd:Pjdr2_4661 putative DNA helicase YP_003590532.1 KEGG: bsu:BSU12250 putative phosphate ABC transporter (ATP-binding protein); PFAM: ABC transporter related; SMART: AAA ATPase YP_003590533.1 PFAM: conserved hypothetical protein; KEGG: aac:Aaci_2859 hypothetical protein YP_003590534.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gwc:GWCH70_1827 protein of unknown function DUF6 transmembrane YP_003590535.1 PFAM: amino acid permease-associated region; KEGG: bld:BLi03669 YvbW YP_003590536.1 PFAM: aminotransferase class I and II; KEGG: aac:Aaci_1035 aminotransferase class I and II YP_003590537.1 KEGG: msm:MSMEG_1088 glutamyl-tRNA(Gln)/aspartyl- tRNA(Asn) amidotransferase, A subunit; PFAM: Amidase YP_003590538.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590539.1 PFAM: putative transposase; KEGG: rle:pRL110341 putative transposase for insertion sequence element YP_003590540.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dat:HRM2_26340 XerC YP_003590541.1 PFAM: integrase family protein; KEGG: reh:PHG057 putative integrase/recombinase YP_003590542.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: drm:Dred_1909 transposase IS116/IS110/IS902 family protein YP_003590543.1 KEGG: app:CAP2UW1_3683 hypothetical protein YP_003590544.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003590545.1 PFAM: IstB domain protein ATP-binding protein; KEGG: aac:Aaci_1555 IstB domain protein ATP-binding protein YP_003590546.1 PFAM: Integrase catalytic region; KEGG: aac:Aaci_1554 integrase catalytic region YP_003590547.1 PFAM: Integrase catalytic region; KEGG: dae:Dtox_2623 transposase IS3/IS911 family protein YP_003590548.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590549.1 PFAM: Integral membrane protein TerC; KEGG: gtn:GTNG_0523 hypothetical protein YP_003590550.1 PFAM: nitroreductase; KEGG: bpu:BPUM_3458 flavin reductase YP_003590551.1 KEGG: sfu:Sfum_1351 hypothetical protein YP_003590552.1 KEGG: bcl:ABC2043 diadenosine tetraphosphatase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_003590553.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bha:BH3875 hypothetical protein YP_003590554.1 PFAM: cytochrome c class I; KEGG: afl:Aflv_2560 cytochrome c551 YP_003590555.1 KEGG: scl:sce5636 protein kinase YP_003590556.1 KEGG: xcv:XCVd0085 hypothetical protein YP_003590557.1 KEGG: aac:Aaci_1053 integrase catalytic region YP_003590558.1 KEGG: tro:trd_A0563 xanthine dehydrogenase accessory factor, putative subfamily, putative; PFAM: YHS domain protein; SMART: TRASH domain protein YP_003590559.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: dge:Dgeo_0213 carbon monoxide dehydrogenase subunit G YP_003590560.1 KEGG: rxy:Rxyl_0114 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003590561.1 PFAM: VWA containing CoxE family protein; KEGG: rmr:Rmar_2769 VWA containing CoxE family protein YP_003590562.1 KEGG: dge:Dgeo_0385 hypothetical protein; PFAM: protein of unknown function DUF182 YP_003590563.1 KEGG: bba:Bd3304 hypothetical protein YP_003590564.1 KEGG: hypothetical protein YP_003590565.1 KEGG: ckr:CKR_1206 hypothetical protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_003590566.1 KEGG: ckr:CKR_1211 hypothetical protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003590567.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: pfl:PFL_4027 oligopeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase YP_003590568.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckr:CKR_1209 hypothetical protein YP_003590569.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckr:CKR_1208 hypothetical protein YP_003590570.1 PFAM: extracellular solute-binding protein family 5; KEGG: ckr:CKR_1207 hypothetical protein YP_003590571.1 PFAM: peptidase M19 renal dipeptidase; KEGG: ckr:CKR_1212 hypothetical protein YP_003590572.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_1890 acyl-CoA synthetases (AMP- forming)/AMP-acid ligases II YP_003590573.1 PFAM: major facilitator superfamily MFS_1; KEGG: aac:Aaci_0877 major facilitator superfamily MFS_1 YP_003590574.1 KEGG: aac:Aaci_3076 diguanylate phosphodiesterase; PFAM: EAL domain protein; Sporulation stage 0, Spo0E-like regulatory phosphatase; SMART: EAL domain protein YP_003590575.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590576.1 KEGG: gka:GK3096 mercuric reductase; TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003590577.1 KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003590578.1 KEGG: rxy:Rxyl_1770 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003590579.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; KEGG: dae:Dtox_2000 DNA binding domain protein, excisionase family; SMART: regulatory protein MerR YP_003590580.1 KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003590581.1 KEGG: rca:Rcas_1290 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590582.1 PFAM: transcriptional regulator PadR family protein; KEGG: glo:Glov_0133 transcriptional regulator, PadR- like family YP_003590583.1 PFAM: class II aldolase/adducin family protein; KEGG: afo:Afer_1874 class II aldolase/adducin family protein YP_003590584.1 PFAM: plasmid stabilization system; KEGG: gwc:GWCH70_3095 hypothetical protein YP_003590585.1 KEGG: gwc:GWCH70_3096 hypothetical protein YP_003590586.1 KEGG: gym:GYMC10_0995 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_003590587.1 PFAM: Methyltransferase type 11; KEGG: rci:RCIX2438 SAM-dependent methyltransferase YP_003590588.1 KEGG: pjd:Pjdr2_1091 glutamyl-tRNA(Gln) amidotransferase, B subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase YP_003590589.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: gka:GK0282 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase YP_003590590.1 KEGG: gtn:GTNG_0261 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003590591.1 KEGG: Os03g0362500; hypothetical protein YP_003590592.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: ate:Athe_0835 glycosyl transferase family 4 YP_003590593.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin- helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: gwc:GWCH70_0271 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD- dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein YP_003590594.1 KEGG: gtn:GTNG_0255 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase YP_003590595.1 KEGG: SNF2 superfamily protein YP_003590596.1 KEGG: gyc:GYMC61_1144 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor YP_003590597.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aac:Aaci_0815 enoyl-CoA hydratase/isomerase YP_003590598.1 KEGG: aac:Aaci_2384 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003590599.1 KEGG: aac:Aaci_2386 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003590600.1 KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003590601.1 KEGG: aac:Aaci_2553 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein YP_003590602.1 KEGG: aac:Aaci_2554 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003590603.1 KEGG: mta:Moth_0226 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003590604.1 KEGG: mta:Moth_1128 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590605.1 KEGG: lhk:LHK_02224 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590606.1 KEGG: lhk:LHK_02225 glutamine transport system substrate-binding protein precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003590607.1 PFAM: LamB/YcsF family protein; KEGG: bsu:BSU04050 LamB/YcsF family protein YP_003590608.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: bay:RBAM_004320 KipA; PFAM: Allophanate hydrolase subunit 2 YP_003590609.1 KEGG: bay:RBAM_004310 KipI; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_003590610.1 KEGG: hypothetical protein YP_003590611.1 KEGG: chy:CHY_0986 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003590612.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: dau:Daud_1783 flagellar hook-associated 2 domain-containing protein YP_003590613.1 PFAM: flagellar protein FlaG protein; KEGG: dae:Dtox_0668 flagellar protein FlaG protein YP_003590614.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbe:BBR47_11010 hypothetical protein YP_003590615.1 KEGG: hypothetical protein YP_003590616.1 PFAM: transposase mutator type; KEGG: aac:Aaci_1531 transposase mutator type YP_003590617.1 KEGG: par:Psyc_1530 peptidase RseP YP_003590618.1 KEGG: bcq:BCQ_4963 lichenicidin prepeptide YP_003590619.1 KEGG: efa:EF0525 CylL-L protein YP_003590620.1 PFAM: Abortive infection protein; KEGG: dhd:Dhaf_3241 abortive infection protein YP_003590621.1 PFAM: Abortive infection protein; KEGG: dhd:Dhaf_3241 abortive infection protein YP_003590622.1 PFAM: Lanthionine synthetase C family protein; KEGG: bcq:BCQ_4956 lantibiotic modifying enzyme YP_003590623.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bcq:BCQ_4950 intracellular serine protease YP_003590624.1 KEGG: bcq:BCQ_4951 lantibiotic transport protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase YP_003590625.1 KEGG: bce:BC2442 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003590626.1 KEGG: gtn:GTNG_1264 hypothetical protein YP_003590627.1 KEGG: mgi:Mflv_1475 major facilitator transporter YP_003590628.1 KEGG: bcq:BCQ_4963 lichenicidin prepeptide YP_003590629.1 PFAM: Abortive infection protein; KEGG: dhd:Dhaf_3241 abortive infection protein YP_003590630.1 PFAM: transposase IS605 OrfB; KEGG: adg:Adeg_0745 transposase IS605 OrfB YP_003590631.1 KEGG: syx:SynWH7803_0175 ABC-type sugar transport system, periplasmic component YP_003590632.1 PFAM: peptidase M48 Ste24p; KEGG: eat:EAT1b_2333 peptidase M48 Ste24p YP_003590633.1 PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; KEGG: btl:BALH_0448 diacylglycerol glucosyltransferase YP_003590634.1 PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_0465 major facilitator superfamily MFS_1 YP_003590635.1 KEGG: gyc:GYMC61_0223 peptidoglycan-binding lysin domain protein; PFAM: glycoside hydrolase family 18; Peptidoglycan- binding lysin domain; SMART: Peptidoglycan-binding LysM; chitinase II YP_003590636.1 KEGG: dae:Dtox_1540 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase YP_003590637.1 PFAM: protein of unknown function DUF1156; KEGG: app:CAP2UW1_4592 hypothetical protein YP_003590638.1 KEGG: syp:SYNPCC7002_F0018 hypothetical protein YP_003590639.1 KEGG: ter:Tery_3115 AAA family ATPase YP_003590640.1 KEGG: rfr:Rfer_0461 aminotransferase, class IV YP_003590641.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: hmo:HM1_2081 signal transduction protein, putative; SMART: EAL domain protein; GGDEF domain containing protein YP_003590642.1 KEGG: aac:Aaci_1905 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590643.1 KEGG: scl:sce2944 phosphate ABC transporter, permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590644.1 KEGG: aba:Acid345_2974 phosphate ABC transporter inner membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590645.1 KEGG: geo:Geob_2012 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003590646.1 KEGG: adg:Adeg_1616 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003590647.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: afr:AFE_2158 transcriptional regulator, LysR family YP_003590648.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: bbe:BBR47_54890 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003590649.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: syf:Synpcc7942_0977 phosphoribulokinase YP_003590650.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: hmo:HM1_2603 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003590651.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: chy:CHY_0787 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_003590652.1 KEGG: min:Minf_1264 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit- like YP_003590653.1 KEGG: min:Minf_1263 ribulose bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain YP_003590654.1 TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: noc:Noc_0331 AAA ATPase; SMART: AAA ATPase YP_003590655.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aac:Aaci_1778 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003590656.1 KEGG: gwc:GWCH70_1241 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_003590657.1 KEGG: pjd:Pjdr2_5804 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003590658.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: afl:Aflv_2715 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase YP_003590659.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bbe:BBR47_54450 NADH-quinone oxidoreductase chain A YP_003590660.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: pjd:Pjdr2_5811 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003590661.1 KEGG: bca:BCE_5423 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003590662.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: afl:Aflv_2697 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003590663.1 KEGG: bbe:BBR47_54410 NADH-quinone oxidoreductase chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003590664.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gtn:GTNG_3297 NADH dehydrogenase subunit I YP_003590665.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: bbe:BBR47_54390 NADH-quinone oxidoreductase chain J YP_003590666.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gwc:GWCH70_3294 NADH-ubiquinone oxidoreductase chain 4L YP_003590667.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: gtn:GTNG_3294 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003590668.1 KEGG: gtn:GTNG_3292 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003590669.1 KEGG: sde:Sde_3293 hypothetical protein YP_003590670.1 KEGG: cch:Cag_1687 hypothetical protein YP_003590671.1 KEGG: cch:Cag_1686 hypothetical protein YP_003590673.1 KEGG: bbt:BBta_2331 hypothetical protein YP_003590674.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: bwe:BcerKBAB4_0306 putative sigma54 specific transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003590675.1 TIGRFAM: histidinol dehydrogenase; KEGG: smd:Smed_1713 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003590676.1 KEGG: cbe:Cbei_4350 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003590677.1 KEGG: cbe:Cbei_4349 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590678.1 KEGG: adg:Adeg_2055 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590679.1 KEGG: tte:TTE2558 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003590680.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_1658 2,3-dihydroxy-2,3- dihydrophenylpropionate dehydrogenase YP_003590681.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro10136 2-hydroxy-6-oxo-6-phenylhexa- 2,4-dienoate hydrolase YP_003590682.1 KEGG: tro:trd_A0339 dihydrodiol dehydrogenase YP_003590683.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: mjl:Mjls_1661 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_003590684.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: mgi:Mflv_0537 ring hydroxylating dioxygenase, alpha subunit YP_003590685.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msl:Msil_1465 glyoxalase/bleomycin resistance protein/dioxygenase YP_003590687.1 PFAM: aldo/keto reductase; KEGG: gwc:GWCH70_2264 aldo/keto reductase YP_003590688.1 KEGG: dhd:Dhaf_3797 hypothetical protein YP_003590689.1 KEGG: chl:Chy400_2359 hypothetical protein YP_003590690.1 PFAM: protein of unknown function UPF0150; HicB family protein; KEGG: drm:Dred_2428 hypothetical protein YP_003590691.1 KEGG: dae:Dtox_0157 hypothetical protein YP_003590693.1 PFAM: carbonic anhydrase; KEGG: rca:Rcas_1333 carbonic anhydrase YP_003590694.1 KEGG: dhd:Dhaf_1775 hypothetical protein YP_003590695.1 PFAM: copper amine oxidase domain protein; KEGG: swo:Swol_0126 N-acetylmuramoyl-L-alanine amidase YP_003590696.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: afl:Aflv_0317 C-di-GMP phosphodiesterase class II (HD-GYP domain) YP_003590697.1 KEGG: aac:Aaci_3076 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003590698.1 KEGG: bbe:BBR47_46660 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003590699.1 KEGG: dhd:Dhaf_1775 hypothetical protein YP_003590700.1 KEGG: drm:Dred_0797 hypothetical protein YP_003590701.1 KEGG: pth:PTH_0403 nucleic acid-binding protein YP_003590702.1 KEGG: dhd:Dhaf_0322 transcriptional regulator, AbrB family YP_003590703.1 KEGG: pth:PTH_0397 cytotoxic translational repressor YP_003590704.1 KEGG: cai:Caci_1812 helicase C2 YP_003590705.1 KEGG: tko:TK0470 reverse gyrase YP_003590706.1 KEGG: hypothetical protein YP_003590707.1 KEGG: dal:Dalk_4980 hypothetical protein YP_003590708.1 KEGG: hau:Haur_3672 hypothetical protein YP_003590709.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: gur:Gura_3165 CopG/DNA-binding domain- containing protein YP_003590710.1 PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0249 hypothetical protein YP_003590711.1 PFAM: YcfA family protein; KEGG: mta:Moth_0250 YcfA-like YP_003590712.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ere:EUBREC_2418 putative acetyl-hydrolase YP_003590713.1 PFAM: aldo/keto reductase; KEGG: gwc:GWCH70_2264 aldo/keto reductase YP_003590714.1 KEGG: hmo:HM1_0414 hypothetical protein YP_003590716.1 PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: ppw:PputW619_4524 plasmid pRiA4b ORF-3 family protein YP_003590717.1 KEGG: similar to alpha-5 collagen YP_003590718.1 KEGG: ace:Acel_0249 xylose isomerase domain- containing protein YP_003590719.1 PFAM: YcfA family protein; KEGG: rpb:RPB_2527 YcfA-like YP_003590720.1 PFAM: protein of unknown function UPF0150; KEGG: pth:PTH_0935 hypothetical protein YP_003590722.1 KEGG: lba:Lebu_0829 hypothetical protein YP_003590723.1 KEGG: avn:Avin_17430 hypothetical protein YP_003590724.1 KEGG: rsh:Rsph17029_3189 hypothetical protein YP_003590725.1 SMART: AAA ATPase; KEGG: hmo:HM1_0414 hypothetical protein YP_003590726.1 KEGG: esi:Exig_0369 hypothetical protein YP_003590727.1 KEGG: pma:Pro1273 hypothetical protein YP_003590728.1 KEGG: sgr:SGR_3857 hypothetical protein YP_003590729.1 KEGG: dhd:Dhaf_1775 hypothetical protein YP_003590730.1 KEGG: drm:Dred_0797 hypothetical protein YP_003590731.1 KEGG: pth:PTH_0403 nucleic acid-binding protein YP_003590732.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: gur:Gura_3165 CopG/DNA-binding domain- containing protein YP_003590733.1 PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0249 hypothetical protein YP_003590734.1 PFAM: YcfA family protein; KEGG: mta:Moth_0250 YcfA-like YP_003590735.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ere:EUBREC_2418 putative acetyl-hydrolase YP_003590736.1 KEGG: drm:Dred_3238 transposase, IS4 family protein YP_003590737.1 PFAM: protein of unknown function UPF0150; KEGG: drm:Dred_2428 hypothetical protein YP_003590738.1 PFAM: N-6 DNA methylase; KEGG: mma:MM_2981 type I restriction-modification system specificity subunit YP_003590739.1 PFAM: N-6 DNA methylase; KEGG: tte:TTE1547 type I restriction-modification system methyltransferase subunit YP_003590740.1 KEGG: tte:TTE1545 restriction endonuclease S subunits YP_003590741.1 KEGG: paa:Paes_1336 hypothetical protein YP_003590742.1 KEGG: rca:Rcas_0618 hypothetical protein YP_003590743.1 PFAM: DNA polymerase beta domain protein region; KEGG: dhd:Dhaf_1803 DNA polymerase beta domain protein region YP_003590744.1 PFAM: protein of unknown function DUF86; KEGG: dhd:Dhaf_1804 protein of unknown function DUF86 YP_003590745.1 KEGG: aac:Aaci_3055 transposase IS4 family protein YP_003590746.1 PFAM: HicB family protein; protein of unknown function UPF0150; KEGG: tde:TDE0481 hypothetical protein YP_003590747.1 PFAM: protein of unknown function UPF0150; KEGG: pth:PTH_0935 hypothetical protein YP_003590748.1 KEGG: gka:GK2708 hypothetical protein YP_003590749.1 KEGG: bja:bll8177 hypothetical protein YP_003590750.1 KEGG: hypothetical protein YP_003590751.1 PFAM: RES domain protein; KEGG: pph:Ppha_2135 RES domain protein YP_003590752.1 KEGG: cce:Ccel_0103 hypothetical protein YP_003590753.1 KEGG: swo:Swol_0231 hypothetical protein YP_003590754.1 PFAM: flagellin domain protein; KEGG: tpd:Teth39_1779 flagellin domain-containing protein YP_003590755.1 KEGG: nca:Noca_0772 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_003590756.1 PFAM: protein of unknown function DUF180; KEGG: cth:Cthe_2240 flagellar assembly protein FliW YP_003590757.1 KEGG: pjd:Pjdr2_5762 hypothetical protein YP_003590758.1 KEGG: pjd:Pjdr2_5763 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_003590759.1 KEGG: gym:GYMC10_5873 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003590760.1 PFAM: FlgN family protein; KEGG: nth:Nther_2237 hypothetical protein YP_003590761.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: fal:FRAAL5154 hypothetical protein YP_003590762.1 PFAM: protein of unknown function DUF820; KEGG: tex:Teth514_0292 hypothetical protein YP_003590763.1 KEGG: ate:Athe_2262 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003590764.1 KEGG: ate:Athe_2261 hypothetical protein YP_003590765.1 KEGG: ate:Athe_1678 hypothetical protein YP_003590766.1 KEGG: aac:Aaci_1561 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_003590767.1 KEGG: aac:Aaci_1601 amino acid transporter YP_003590768.1 KEGG: rpf:Rpic12D_1972 LamB/YcsF family protein YP_003590769.1 KEGG: dma:DMR_11140 competence protein F YP_003590770.1 KEGG: gtn:GTNG_3074 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_003590771.1 SMART: AAA ATPase; Helix-hairpin-helix DNA-binding class 1; TIGRFAM: helicase, RecD/TraA family; KEGG: nth:Nther_2311 helicase, RecD/TraA family; PFAM: UvrD/REP helicase YP_003590772.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: nth:Nther_1347 small acid-soluble spore protein alpha/beta type YP_003590773.1 PFAM: glycosyl transferase family 2; KEGG: gym:GYMC10_5880 hypothetical protein YP_003590774.1 KEGG: bbe:BBR47_54020 two-component response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003590775.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: afl:Aflv_0414 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003590776.1 KEGG: aac:Aaci_1053 integrase catalytic region YP_003590777.1 PFAM: fatty acid desaturase type 2; KEGG: bcz:BCZK2881 acyl-[acyl-carrier protein] desaturase YP_003590778.1 PFAM: protein of unknown function DUF421; KEGG: ajs:Ajs_1869 membrane protein-like protein YP_003590779.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: aac:Aaci_2575 glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003590780.1 KEGG: bbe:BBR47_16660 putative regulatory protein; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003590781.1 PFAM: polysaccharide deacetylase; KEGG: tro:trd_0362 polysaccharide deacetylase family protein YP_003590782.1 PFAM: copper amine oxidase domain protein; KEGG: aac:Aaci_0685 hypothetical protein YP_003590783.1 KEGG: cce:Ccel_0221 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003590784.1 PFAM: S-layer domain protein; KEGG: gym:GYMC10_5889 S-layer domain protein YP_003590785.1 PFAM: conserved hypothetical protein; KEGG: avn:Avin_02480 cation-translocating P-type ATPase with extended N-terminal transmembrane region YP_003590786.1 PFAM: Patatin; KEGG: pfl:PFL_1581 patatin-like phospholipase family protein YP_003590787.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: sth:STH2571 putative enoyl-(acyl-carrier- protein) reductase YP_003590788.1 KEGG: sth:STH42 hypothetical protein YP_003590789.1 KEGG: chy:CHY_0818 hypothetical protein YP_003590790.1 PFAM: thymidine kinase; KEGG: aac:Aaci_1097 hypothetical protein YP_003590791.1 TIGRFAM: alanine racemase; KEGG: sth:STH2936 alanine racemase; PFAM: alanine racemase domain protein YP_003590792.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: gtn:GTNG_0527 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003590793.1 KEGG: gym:GYMC10_1152 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_003590794.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590795.1 PFAM: amino acid permease-associated region; KEGG: mno:Mnod_4992 amino acid permease-associated region YP_003590796.1 KEGG: dia:Dtpsy_2453 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003590797.1 PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein YP_003590798.1 KEGG: lpc:LPC_0902 acetyltransferase YP_003590799.1 KEGG: amr:AM1_2740 hypothetical protein YP_003590800.1 PFAM: purine catabolism PurC domain protein; KEGG: pjd:Pjdr2_4685 transcriptional regulator, CdaR YP_003590801.1 PFAM: class II aldolase/adducin family protein; KEGG: hor:Hore_09610 class II aldolase/adducin family protein YP_003590802.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: pth:PTH_2703 transposase and inactivated derivatives YP_003590803.1 KEGG: dae:Dtox_2459 hypothetical protein YP_003590804.1 PFAM: plasmid stabilization system; KEGG: sus:Acid_1015 plasmid stabilization system protein YP_003590805.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: afl:Aflv_2053 permease of the drug/metabolite transporter (DMT) superfamily YP_003590806.1 KEGG: bbe:BBR47_49070 hypothetical protein YP_003590807.1 KEGG: rxy:Rxyl_0233 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003590808.1 KEGG: dhd:Dhaf_0322 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003590809.1 KEGG: pth:PTH_0397 cytotoxic translational repressor YP_003590810.1 KEGG: dae:Dtox_0135 hypothetical protein YP_003590811.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: lsp:Bsph_2849 enoyl-CoA hydratase echA8 YP_003590812.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: tro:trd_1364 protein C7orf10 YP_003590813.1 PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2118 metabolite transporter YP_003590814.1 KEGG: hypothetical protein YP_003590815.1 PFAM: peptidase S58 DmpA; KEGG: bbe:BBR47_25700 hypothetical protein YP_003590816.1 KEGG: bbe:BBR47_25690 hypothetical protein YP_003590817.1 PFAM: cobalt transport protein; KEGG: bbe:BBR47_25680 probable ABC transporter permease protein YP_003590818.1 KEGG: bbe:BBR47_25670 probable ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590819.1 KEGG: gtn:GTNG_0290 hypothetical protein; TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003590820.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_0092 3-ketoacyl-(acyl-carrier- protein) reductase YP_003590821.1 PFAM: Aldehyde Dehydrogenase; KEGG: bbe:BBR47_56480 putative aldehyde dehydrogenase YP_003590822.1 TIGRFAM: tartrate dehydrogenase; KEGG: bbe:BBR47_56490 isocitrate/isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003590823.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis- type; KEGG: tpd:Teth39_1679 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS domain containing protein YP_003590825.1 KEGG: gyc:GYMC61_2799 nucleic acid-binding protein contains PIN domain-like protein YP_003590826.1 PFAM: flavin reductase domain protein FMN-binding; NADPH-dependent FMN reductase; KEGG: rfr:Rfer_1780 NADPH-dependent FMN reductase YP_003590827.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dat:HRM2_47720 SerA2 YP_003590828.1 KEGG: mlo:mlr9217 dibenzothiophene desulfurization enzyme YP_003590829.1 PFAM: Endoribonuclease L-PSP; KEGG: ate:Athe_0192 endoribonuclease L-PSP YP_003590830.1 PFAM: Extracellular ligand-binding receptor; KEGG: gvi:glr2353 periplasmic amino acid-binding protein YP_003590831.1 PFAM: inner-membrane translocator; KEGG: sat:SYN_00787 branched-chain amino acid transport system permease protein YP_003590832.1 KEGG: tex:Teth514_0572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590833.1 KEGG: rca:Rcas_1895 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590834.1 PFAM: inner-membrane translocator; KEGG: lip:LI0338 branched chain amino acid ABC transporter, permease protein YP_003590835.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rxy:Rxyl_2065 LysR family transcriptional regulator YP_003590836.1 KEGG: app:CAP2UW1_3684 hypothetical protein YP_003590837.1 TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, beta subunit; KEGG: mcl:MCCL_0809 L-serine dehydratase beta subunit; PFAM: serine dehydratase beta chain; amino acid- binding ACT domain protein YP_003590838.1 TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, alpha subunit; KEGG: gym:GYMC10_0512 L-serine dehydratase, iron- sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain YP_003590839.1 KEGG: gym:GYMC10_0510 dihydrodipicolinate synthetase YP_003590840.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gym:GYMC10_0509 NAD-dependent epimerase/dehydratase YP_003590841.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_1863 major facilitator transporter YP_003590842.1 TIGRFAM: amidohydrolase; KEGG: gwc:GWCH70_3175 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003590843.1 KEGG: gtn:GTNG_3187 hypothetical protein YP_003590845.1 PFAM: amino acid permease-associated region; KEGG: gtn:GTNG_1284 gamma-aminobutyrate permease YP_003590846.1 PFAM: aminotransferase class-III; KEGG: bbe:BBR47_32450 probable aminotransferase YP_003590847.1 TIGRFAM: alanine dehydrogenase; KEGG: ttj:TTHA0216 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003590848.1 KEGG: gtn:GTNG_1849 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003590849.1 KEGG: pth:PTH_2513 hypothetical protein YP_003590850.1 KEGG: dau:Daud_0319 PilT domain-containing protein YP_003590851.1 KEGG: rmr:Rmar_0557 hypothetical protein YP_003590852.1 KEGG: cdl:CDR20291_3366 putative phophoesterase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003590853.1 PFAM: amidohydrolase; KEGG: pjd:Pjdr2_1120 amidohydrolase YP_003590854.1 KEGG: cdl:CDR20291_3368 phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590855.1 KEGG: cdl:CDR20291_3369 phosphonate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003590856.1 PFAM: phosphonate metabolism PhnJ; KEGG: cdl:CDR20291_3370 putative phosphonate metabolism protein YP_003590857.1 PFAM: phosphonate metabolism; KEGG: mpt:Mpe_B0462 phosphonate metabolism protein YP_003590858.1 KEGG: cdf:CD3537 putative phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_003590859.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; KEGG: cdl:CDR20291_3373 putative phosphonate metabolism protein YP_003590860.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: vap:Vapar_0376 transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH YP_003590861.1 PFAM: amidohydrolase; KEGG: ele:Elen_0233 amidohydrolase YP_003590862.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: dba:Dbac_0821 phosphonate metabolim protein, transferase hexapeptide repeat family YP_003590863.1 KEGG: amt:Amet_1160 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590864.1 KEGG: bha:BH0470 phosphonates transport system (permease); TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003590865.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: amt:Amet_1162 phosphonate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003590866.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonates transport system (phosphate-binding protein) YP_003590867.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aac:Aaci_1458 short-chain dehydrogenase/reductase SDR YP_003590868.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rxy:Rxyl_2358 AMP-dependent synthetase and ligase YP_003590869.1 PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein YP_003590870.1 KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_003590871.1 KEGG: bld:BLi00965 YhcA; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590872.1 PFAM: secretion protein HlyD family protein; KEGG: bcb:BCB4264_A4677 hypothetical protein YP_003590873.1 KEGG: drm:Dred_0454 secretion protein HlyD YP_003590874.1 KEGG: bbe:BBR47_13980 putative transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003590875.1 KEGG: aac:Aaci_2223 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein YP_003590876.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gyc:GYMC61_1743 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003590877.1 KEGG: bbe:BBR47_16630 probable polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase YP_003590878.1 KEGG: bsu:BSU36050 spore coat protein (outer) YP_003590880.1 PFAM: Arsenical pump membrane protein; KEGG: pjd:Pjdr2_2369 arsenical pump membrane protein YP_003590881.1 KEGG: gtn:GTNG_2559 pili biogenesis protein PilB- like ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase YP_003590882.1 PFAM: Type II secretion system F domain; KEGG: tpd:Teth39_1069 type II secretion system protein YP_003590883.1 KEGG: aac:Aaci_0303 type IV pilin YP_003590884.1 KEGG: syn:slr1120 type 4 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_003590885.1 KEGG: dac:Daci_5510 YD repeat-containing protein YP_003590886.1 KEGG: rso:RSc0726 hypothetical protein YP_003590887.1 KEGG: nca:Noca_1125 hypothetical protein YP_003590888.1 KEGG: amr:AM1_3324 hypothetical protein YP_003590889.1 KEGG: aac:Aaci_0307 Tfp pilus assembly protein ATPase PilM-like protein YP_003590890.1 PFAM: Fimbrial assembly family protein; KEGG: SL44-1; basic proline-rich protein YP_003590891.1 KEGG: YALI0F00990p YP_003590892.1 KEGG: azo:azo1486 putative signaling protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_003590893.1 PFAM: protein of unknown function DUF159; KEGG: pjd:Pjdr2_3739 protein of unknown function DUF159 YP_003590894.1 PFAM: peptidase M42 family protein; KEGG: tex:Teth514_0376 peptidase M42 family protein YP_003590895.1 KEGG: dhd:Dhaf_2767 peptidase M42 family protein; PFAM: peptidase M42 family protein YP_003590896.1 PFAM: peptidase M42 family protein; KEGG: sth:STH1081 endo-1,4-beta-glucanase YP_003590897.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hmo:HM1_1180 transmembrane small multi-drug resistance protein, putative YP_003590898.1 KEGG: adg:Adeg_0091 hypothetical protein YP_003590899.1 PFAM: glycosyl transferase family 2; KEGG: adg:Adeg_0090 glycosyl transferase family 2 YP_003590900.1 KEGG: mta:Moth_2225 hypothetical protein YP_003590901.1 PFAM: ABC-2 type transporter; KEGG: bbe:BBR47_07050 Na(+) extrusion ABC transporter permease protein YP_003590902.1 KEGG: bbe:BBR47_07040 Na(+) extrusion ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003590903.1 PFAM: glycosyl transferase group 1; KEGG: aac:Aaci_1655 glycosyl transferase group 1 YP_003590904.1 KEGG: sus:Acid_6881 Ig family protein; PFAM: S-layer domain protein; Ig family protein; SMART: Dystroglycan-type cadherin domain protein YP_003590905.1 KEGG: gym:GYMC10_0772 hypothetical protein YP_003590906.1 PFAM: DNA polymerase beta domain protein region; KEGG: rmr:Rmar_0551 DNA polymerase beta domain protein region YP_003590907.1 KEGG: hmo:HM1_0739 nucleotidyltransferase substrate- binding protein, putative; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074 YP_003590908.1 PFAM: S-layer domain protein; KEGG: pth:PTH_0929 hypothetical protein YP_003590909.1 KEGG: gyc:GYMC61_2219 quinone oxidoreductase, YhdH/YhfP family; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003590910.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: dhd:Dhaf_3290 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein YP_003590911.1 KEGG: aac:Aaci_2951 hypothetical protein YP_003590912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: lbl:LBL_2515 cation transporter protein YP_003590913.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: noc:Noc_1950 short-chain dehydrogenase/reductase SDR YP_003590914.1 PFAM: FAD linked oxidase domain protein; D- arabinono-14-lactone oxidase; KEGG: app:CAP2UW1_1472 FAD linked oxidase domain protein YP_003590915.1 KEGG: aac:Aaci_2611 hypothetical protein YP_003590916.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rer:RER_13150 protein-tyrosine kinase YP_003590917.1 PFAM: O-antigen polymerase; KEGG: cac:CAC3293 hypothetical protein YP_003590918.1 KEGG: ctt:CtCNB1_3290 type IV pilus biogenesis/stability protein PilW YP_003590919.1 PFAM: acriflavin resistance protein; KEGG: drm:Dred_2950 acriflavin resistance protein YP_003590920.1 KEGG: bbe:BBR47_32120 putative efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003590921.1 KEGG: bbe:BBR47_14010 putative multidrug resistance protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003590922.1 KEGG: bbe:BBR47_14000 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003590923.1 PFAM: secretion protein HlyD family protein; KEGG: bbe:BBR47_13990 hypothetical protein YP_003590924.1 PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4152 outer membrane protein-like protein YP_003590925.1 PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4154 copper amine oxidase domain protein YP_003590926.1 PFAM: glycosyl transferase group 1; KEGG: adg:Adeg_0104 glycosyl transferase group 1 YP_003590927.1 KEGG: acr:Acry_2174 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_003590928.1 KEGG: dae:Dtox_0468 hypothetical protein YP_003590929.1 KEGG: hut:Huta_0976 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein YP_003590930.1 KEGG: efa:EF3263 hypothetical protein YP_003590931.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590932.1 PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein YP_003590933.1 TIGRFAM: prevent-host-death family protein; KEGG: dol:Dole_0923 prevent-host-death family protein YP_003590934.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; KEGG: dae:Dtox_2000 DNA binding domain protein, excisionase family; SMART: regulatory protein MerR YP_003590935.1 KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003590936.1 KEGG: eba:p2A362 hypothetical protein YP_003590937.1 KEGG: gur:Gura_0714 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003590938.1 KEGG: min:Minf_2376 transposon IS605 OrfA, integrase-resolvase; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; Resolvase domain YP_003590939.1 PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: mtp:Mthe_1117 IS605 family transposase OrfB YP_003590940.1 PFAM: protein of unknown function DUF955; helix- turn-helix domain protein; KEGG: dae:Dtox_3877 helix-turn-helix domain protein YP_003590941.1 PFAM: SpoVT/AbrB domain protein; KEGG: gym:GYMC10_0285 transcriptional regulator/antitoxin, MazE YP_003590942.1 KEGG: afl:Aflv_1612 prophage maintenance system killer protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic YP_003590944.1 PFAM: protein of unknown function DUF820; KEGG: gka:GK2126 hypothetical protein YP_003590945.1 PFAM: SpoVT/AbrB domain protein; KEGG: hbu:Hbut_0673 hypothetical protein YP_003590946.1 KEGG: gur:Gura_0714 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003590947.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_0713 PilT domain-containing protein YP_003590948.1 KEGG: azo:azo0631 HD-domain-containing protein YP_003590949.1 KEGG: cac:CAC0427 glycerol-3-phosphate ABC- transporter, permease component YP_003590950.1 PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF) YP_003590951.1 PFAM: SpoVT/AbrB domain protein; KEGG: gyc:GYMC61_2489 transcriptional regulator/antitoxin, MazE YP_003590952.1 PFAM: protein of unknown function DUF820; KEGG: dsy:DSY2029 hypothetical protein YP_003590953.1 KEGG: cch:Cag_0883 hypothetical protein YP_003590954.1 PFAM: acriflavin resistance protein; KEGG: gur:Gura_4228 acriflavin resistance protein YP_003590955.1 KEGG: saf:SULAZ_0501 acriflavin resistance protein AcrE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003590956.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: gyc:GYMC61_3242 protein of unknown function UPF0029 YP_003590957.1 KEGG: swo:Swol_0747 hypothetical protein YP_003590958.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: aac:Aaci_2744 transcriptional regulator, LuxR family; SMART: regulatory protein LuxR YP_003590959.1 KEGG: gym:GYMC10_5895 beta-hydroxyacyl-(acyl- carrier-protein) dehydratase FabZ; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003590960.1 KEGG: bbe:BBR47_54230 hypothetical protein; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003590961.1 KEGG: csc:Csac_0595 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003590962.1 KEGG: gwc:GWCH70_3281 flagellar basal body rod protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003590963.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: aac:Aaci_2750 sporulation transcriptional regulator SpoIIID YP_003590964.1 PFAM: Peptidase M23; KEGG: bbe:BBR47_54300 forespore-expressed protein YP_003590965.1 KEGG: mta:Moth_2374 sporulation protein and related proteins; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein YP_003590966.1 KEGG: bay:RBAM_007600 YfmS; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003590967.1 KEGG: kra:Krad_2874 hypothetical protein YP_003590968.1 KEGG: aac:Aaci_2753 UDP-N-acetylglucosamine1- carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003590969.1 PFAM: Protein of unknown function DUF1779; KEGG: aac:Aaci_2754 hypothetical protein YP_003590970.1 PFAM: conserved hypothetical protein; KEGG: esi:Exig_2674 hypothetical protein YP_003590971.1 KEGG: aac:Aaci_1684 hypothetical protein YP_003590972.1 PFAM: major facilitator superfamily MFS_1; KEGG: aac:Aaci_0213 major facilitator superfamily MFS_1 YP_003590973.1 KEGG: bbe:BBR47_54350 NADH-quinone oxidoreductase chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003590974.1 KEGG: bbe:BBR47_54360 NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003590975.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: bbe:BBR47_54370 NADH-quinone oxidoreductase chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003590976.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bbe:BBR47_54380 NADH-quinone oxidoreductase chain K YP_003590977.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: pjd:Pjdr2_5807 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003590978.1 KEGG: bbe:BBR47_54400 NADH-quinone oxidoreductase chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003590979.1 KEGG: bbe:BBR47_54410 NADH-quinone oxidoreductase chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003590980.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: afl:Aflv_2697 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003590981.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gtn:GTNG_3300 NADH dehydrogenase subunit C YP_003590982.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: pjd:Pjdr2_5811 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003590983.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bwe:BcerKBAB4_5098 NADH dehydrogenase subunit A YP_003590984.1 KEGG: afl:Aflv_2701 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit- like YP_003590985.1 SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: aac:Aaci_2757 ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003590986.1 KEGG: pjd:Pjdr2_5819 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003590987.1 TIGRFAM: ATP synthase F1, alpha subunit; KEGG: pjd:Pjdr2_5820 ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003590988.1 KEGG: swo:Swol_2385 ATP synthase F1 delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003590989.1 KEGG: bha:BH3758 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_003590990.1 KEGG: afl:Aflv_2707 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003590991.1 KEGG: pjd:Pjdr2_5824 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_003590992.1 PFAM: ATP synthase I; KEGG: stp:Strop_1674 cation efflux protein YP_003590993.1 KEGG: hmo:HM1_1096 hypothetical protein YP_003590994.1 KEGG: aac:Aaci_2058 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003590995.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: hor:Hore_17920 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003590996.1 KEGG: dsy:DSY4927 hypothetical protein; PFAM: glycine hydroxymethyltransferase YP_003590997.1 PFAM: conserved hypothetical protein; KEGG: sth:STH78 hypothetical protein YP_003590998.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: afl:Aflv_2715 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase YP_003590999.1 PFAM: SirA family protein; KEGG: kse:Ksed_00560 predicted redox protein, regulator of disulfide bond formation YP_003591000.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: efe:EFER_2096 conserved hypothetical protein; putative inner membrane protein YP_003591001.1 KEGG: bbe:BBR47_54720 low molecular weight protein- tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003591002.1 KEGG: nwi:Nwi_1300 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003591003.1 PFAM: zinc/iron permease; KEGG: dau:Daud_0057 zinc/iron permease YP_003591004.1 PFAM: protein of unknown function DUF204; KEGG: bbe:BBR47_54730 hypothetical protein YP_003591005.1 KEGG: afl:Aflv_2719 putative translation factor (SUA5); TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003591006.1 KEGG: aac:Aaci_2778 stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R YP_003591007.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: chl:Chy400_1757 protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small YP_003591008.1 KEGG: aac:Aaci_2780 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003591009.1 KEGG: mpo:Mpop_2298 filamentation induced by cAMP protein Fic YP_003591010.1 PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: dau:Daud_1400 membrane lipoprotein lipid attachment site YP_003591011.1 KEGG: pjd:Pjdr2_0142 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003591012.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: drt:Dret_1804 protein of unknown function DUF2078, membrane YP_003591013.1 TIGRFAM: glycerate kinase; KEGG: spe:Spro_1142 glycerate kinase; PFAM: glycerate kinase YP_003591014.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA- binding; Rho termination factor domain protein; KEGG: aac:Aaci_2782 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_003591015.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: gtn:GTNG_3328 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_003591016.1 KEGG: bbe:BBR47_22900 hypothetical protein YP_003591017.1 TIGRFAM: amidohydrolase; KEGG: afl:Aflv_1903 metal-dependent amidase/aminoacylase/carboxypeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003591018.1 KEGG: bbe:BBR47_39110 putative 2,3,4,5- tetrahydropyridine-2-carboxylate N-acetyltransferase; TIGRFAM:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase hexapeptide repeat containing protein YP_003591019.1 KEGG: sth:STH2130 hypothetical protein YP_003591020.1 TIGRFAM: transaldolase; KEGG: aac:Aaci_2783 transaldolase; PFAM: Transaldolase YP_003591021.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: hor:Hore_18020 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_003591022.1 KEGG: aac:Aaci_2784 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591023.1 TIGRFAM: CTP synthase; KEGG: afl:Aflv_2732 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003591024.1 PFAM: DNA-directed RNA polymerase delta subunit; KEGG: gym:GYMC10_0123 DNA-directed RNA polymerase delta subunit YP_003591025.1 KEGG: pfu:PF1947 hypothetical protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein YP_003591026.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gtn:GTNG_3338 acyl-CoA dehydrogenase (short- chain specific) YP_003591027.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dhd:Dhaf_2865 acyl-CoA dehydrogenase domain protein YP_003591028.1 KEGG: bbe:BBR47_54980 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003591029.1 KEGG: bbe:BBR47_54990 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003591030.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: gwc:GWCH70_3345 protein of unknown function DUF224 cysteine-rich region domain protein YP_003591031.1 KEGG: tpd:Teth39_1303 small acid-soluble spore protein, alpha/beta type YP_003591032.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: gyc:GYMC61_3457 arginyl-tRNA synthetase YP_003591033.1 KEGG: aac:Aaci_2793 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003591034.1 KEGG: bha:BH3811 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_003591035.1 KEGG: aac:Aaci_2797 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase YP_003591036.1 PFAM: aminotransferase class I and II; KEGG: aac:Aaci_2798 aminotransferase class I and II YP_003591037.1 KEGG: aac:Aaci_2800 hypothetical protein YP_003591038.1 KEGG: aac:Aaci_2802 hypothetical protein YP_003591039.1 PFAM: lipolytic protein G-D-S-L family; KEGG: aac:Aaci_2673 lipolytic protein G-D-S-L family YP_003591040.1 KEGG: avn:Avin_21300 ABC transporter, ATP binding component; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_003591041.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3625 ABC transport system permease protein YP_003591042.1 PFAM: extracellular solute-binding protein family 1; KEGG: cya:CYA_2782 iron ABC transporter iron- binding subunit YP_003591043.1 PFAM: protein of unknown function DUF163; KEGG: sha:SH0023 hypothetical protein YP_003591044.1 KEGG: gyc:GYMC61_1216 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003591045.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Resolvase domain; regulatory protein MerR; KEGG: pab:PAB2076 resolvase related protein; SMART: regulatory protein MerR YP_003591046.1 KEGG: pjd:Pjdr2_6250 hypothetical protein YP_003591047.1 KEGG: gyc:GYMC61_3534 beta-lactamase domain protein YP_003591048.1 KEGG: bbe:BBR47_59150 hypothetical protein YP_003591049.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: afl:Aflv_2841 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003591050.1 KEGG: bha:BH3243 cell division protein YP_003591051.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: gym:GYMC10_6305 replicative DNA helicase; SMART: AAA ATPase YP_003591052.1 KEGG: gyc:GYMC61_3541 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_003591053.1 KEGG: gym:GYMC10_6309 hypothetical protein YP_003591054.1 KEGG: aac:Aaci_2928 ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003591055.1 KEGG: aac:Aaci_2929 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003591056.1 KEGG: aac:Aaci_2930 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_003591057.1 KEGG: aac:Aaci_2931 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related YP_003591058.1 PFAM: protein of unknown function DUF951; KEGG: tpd:Teth39_2276 hypothetical protein YP_003591059.1 KEGG: pha:PSHAa1329 hypothetical protein YP_003591060.1 KEGG: pjd:Pjdr2_6279 sporulation protein YyaC; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256 YP_003591061.1 KEGG: bbe:BBR47_59330 hypothetical protein; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_003591062.1 KEGG: bbe:BBR47_38910 hypothetical protein YP_003591063.1 PFAM: protein of unknown function DUF554; KEGG: dhd:Dhaf_4952 protein of unknown function DUF554 YP_003591064.1 KEGG: hmo:HM1_0917 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V YP_003591065.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aac:Aaci_2940 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003591066.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aac:Aaci_2941 cobyrinic acid ac-diamide synthase YP_003591067.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bbe:BBR47_59380 nucleoid occlusion protein; SMART: ParB domain protein nuclease YP_003591068.1 KEGG: gwc:GWCH70_3427 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003591069.1 KEGG: aac:Aaci_2944 glucose inhibited division protein A; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003591070.1 KEGG: gym:GYMC10_6336 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003591071.1 KEGG: bbe:BBR47_59450 membrane protein OxaA precursor; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_003591072.1 PFAM: protein of unknown function DUF37; KEGG: ami:Amir_7098 protein of unknown function DUF37 YP_003591073.1 KEGG: bbe:BBR47_59470 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_003591074.1 KEGG: bha:BH4066 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34