-- dump date 20140619_120111 -- class Genbank::CDS -- table cds_note -- id note YP_004540713.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: xce:Xcel_0001 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal YP_004540714.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: xce:Xcel_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain YP_004540715.1 TIGRFAM: 6-phosphogluconate dehydrogenase related protein; KEGG: xce:Xcel_0003 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal YP_004540716.1 TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: xce:Xcel_0004 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal YP_004540717.1 PFAM: Protein of unknown function DUF721; KEGG: xce:Xcel_0005 hypothetical protein YP_004540719.1 SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: xce:Xcel_0006 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal YP_004540720.1 SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: xce:Xcel_0007 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_004540721.1 KEGG: xce:Xcel_0008 FHA domain containing protein YP_004540722.1 KEGG: xce:Xcel_0009 hypothetical protein YP_004540723.1 KEGG: xce:Xcel_0010 hypothetical protein YP_004540724.1 KEGG: xce:Xcel_0011 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_004540725.1 KEGG: xce:Xcel_0012 rhomboid family protein; manually curated; PFAM: peptidase S54, rhomboid YP_004540726.1 PFAM: Uncharacterised protein family UPF0233; KEGG: xce:Xcel_0013 hypothetical protein YP_004540727.1 PFAM: Protein of unknown function DUF881, bacterial; KEGG: xce:Xcel_0014 hypothetical protein YP_004540728.1 KEGG: xce:Xcel_0015 peptidase C60 sortase A and B; TIGRFAM: peptidase C60, sortase A/B; PFAM: peptidase C60, sortase A/B YP_004540729.1 KEGG: xce:Xcel_0016 hypothetical protein YP_004540730.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; KEGG: xce:Xcel_0017 glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I, C-terminal YP_004540731.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: xce:Xcel_0018 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA YP_004540732.1 KEGG: xce:Xcel_0019 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004540733.1 KEGG: xce:Xcel_0020 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase YP_004540734.1 PFAM: Cell cycle protein; KEGG: xce:Xcel_0021 cell cycle protein YP_004540735.1 KEGG: xce:Xcel_0022 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related YP_004540736.1 KEGG: xce:Xcel_0023 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004540737.1 KEGG: xce:Xcel_0024 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004540738.1 KEGG: sgr:SGR_217 secreted pectate lyase; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_004540739.1 KEGG: bcv:Bcav_1778 hypothetical protein YP_004540740.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sur:STAUR_1852 alpha/beta fold family hydrolase YP_004540741.1 manually curated; KEGG: xce:Xcel_0033 NmrA family protein YP_004540742.1 manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: cfl:Cfla_0078 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004540743.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_0035 GCN5-related N-acetyltransferase YP_004540744.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_0036 alpha/beta hydrolase fold family protein YP_004540745.1 KEGG: cfl:Cfla_1919 hypothetical protein YP_004540746.1 PFAM: glycosyl hydrolase, family 13, catalytic region; KEGG: psa:PST_0489 trehalose synthase protein; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004540747.1 PFAM: NGG1p interacting factor 3, NIF3; KEGG: xce:Xcel_0037 hypothetical protein YP_004540748.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: jde:Jden_1629 HAD-superfamily hydrolase, subfamily IIA YP_004540749.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: mts:MTES_2243 hypothetical protein YP_004540750.1 KEGG: xce:Xcel_0038 proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin YP_004540751.1 KEGG: xce:Xcel_0039 class I and II aminotransferase; PFAM: Aminotransferase, class I/II YP_004540752.1 PFAM: PAS fold-3; ANTAR; KEGG: ske:Sked_11970 RNA-binding protein with PAS domain YP_004540753.1 KEGG: xce:Xcel_1402 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004540754.1 KEGG: xce:Xcel_3079 hypothetical protein YP_004540755.1 KEGG: cfl:Cfla_2833 hypothetical protein YP_004540756.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cfl:Cfla_2832 endonuclease/exonuclease/phosphatase YP_004540757.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xce:Xcel_0040 endonuclease/exonuclease/phosphatase YP_004540758.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: ske:Sked_17150 theronine dehydrogenase-like Zn-dependent dehydrogenase YP_004540759.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_3242 sugar ABC transporter permease YP_004540760.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: amd:AMED_3243 sugar ABC transporter permease YP_004540761.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: amd:AMED_3244 sugar ABC transporter periplasmic protein YP_004540762.1 KEGG: xce:Xcel_0041 hypothetical protein YP_004540763.1 KEGG: ske:Sked_00320 hypothetical protein YP_004540764.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xce:Xcel_0043 LysR family transcriptional regulator YP_004540766.1 PFAM: Lactate/malate dehydrogenase; Amino acid-binding ACT; KEGG: afr:AFE_3000 lactate/malate dehydrogenase family protein YP_004540767.1 TIGRFAM: glycine cleavage system P-protein; HAMAP: glycine cleavage system P-protein; KEGG: cfl:Cfla_0093 glycine dehydrogenase; PFAM: glycine cleavage system P-protein, N-terminal; Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004540768.1 PFAM: glycine cleavage T-protein, N-terminal; glycine cleavage T-protein, C-terminal barrel; TIGRFAM: glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: xce:Xcel_0045 glycine cleavage system T protein YP_004540769.1 TIGRFAM: glycine cleavage H-protein, subgroup; HAMAP: glycine cleavage H-protein; KEGG: xce:Xcel_0046 glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004540770.1 KEGG: xce:Xcel_0047 LuxR family transcriptional regulator; PFAM: transcription regulator LuxR, C-terminal; SMART: transcription regulator LuxR, C-terminal YP_004540771.1 PFAM: NUDIX hydrolase domain; KEGG: ske:Sked_00520 ADP-ribose pyrophosphatase YP_004540772.1 KEGG: svi:Svir_11080 glucose/sorbosone dehydrogenase; PFAM: PKD; carbohydrate binding domain, family 6; SMART: PKD YP_004540773.1 TIGRFAM: gamma-glutamyltranspeptidase; KEGG: aau:AAur_3482 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004540774.1 KEGG: xce:Xcel_0050 hypothetical protein YP_004540775.1 PFAM: Heat shock protein Hsp20; KEGG: cfl:Cfla_0098 heat shock protein HSP20 YP_004540776.1 PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: xce:Xcel_1840 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase YP_004540777.1 KEGG: xce:Xcel_0051 methylenetetrahydrofolate reductase (NAD(P)H); PFAM: Methylenetetrahydrofolate reductase YP_004540778.1 KEGG: rop:ROP_38690 oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004540779.1 PFAM: Protein of unknown function DUF88; KEGG: xce:Xcel_0052 hypothetical protein YP_004540780.1 KEGG: xce:Xcel_0053 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004540781.1 PFAM: transcription regulator LuxR, C-terminal; KEGG: sgr:SGR_3263 hypothetical protein YP_004540782.1 KEGG: sna:Snas_2473 hypothetical protein YP_004540783.1 SMART: HNH nuclease; KEGG: xce:Xcel_3314 hypothetical protein YP_004540784.1 PFAM: Protein of unknown function DUF2183; KEGG: xce:Xcel_0054 hypothetical protein YP_004540785.1 KEGG: xce:Xcel_0055 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase YP_004540786.1 KEGG: bfa:Bfae_01800 transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004540787.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bfa:Bfae_01810 ABC-type sugar transporter periplasmic component YP_004540788.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_01820 permease of ABC-type sugar transporter YP_004540789.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_01830 carbohydrate ABC transporter membrane protein YP_004540790.1 PFAM: Protein of unknown function DUF1680; KEGG: bfa:Bfae_01840 hypothetical protein YP_004540791.1 PFAM: glycoside hydrolase, family 31; KEGG: mts:MTES_2147 alpha-glucosidase, family 31 of glycosyl hydrolase YP_004540792.1 KEGG: bfa:Bfae_01850 Ig-like domain-containing protein; PFAM: Bacterial Ig-related; SMART: LamG-like jellyroll fold YP_004540793.1 KEGG: ach:Achl_0347 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004540794.1 PFAM: Amino acid permease-associated region; KEGG: xce:Xcel_0059 amino acid permease-associated region YP_004540795.1 KEGG: sma:SAV_3667 erythropoiesis-stimulating protein; PFAM: transcription regulator LuxR, C-terminal; SMART: transcription regulator LuxR, C-terminal YP_004540796.1 KEGG: xce:Xcel_0073 Appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing YP_004540797.1 SMART: HTTM; KEGG: psl:Psta_4704 vitamin K-dependent gamma-carboxylase YP_004540798.1 PFAM: peptidase A24A, prepilin type IV; KEGG: cef:CE2562 hypothetical protein YP_004540799.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mau:Micau_3161 regulatory protein TetR YP_004540800.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165; KEGG: kse:Ksed_23490 transposase family protein YP_004540801.1 PFAM: Flp/Fap pilin component; KEGG: gob:Gobs_3427 Flp/Fap pilin protein YP_004540802.1 PFAM: TadE-like; KEGG: gob:Gobs_3426 TadE family protein YP_004540803.1 KEGG: gob:Gobs_3425 hypothetical protein YP_004540804.1 KEGG: gob:Gobs_3424 SAF domain-containing protein YP_004540805.1 PFAM: Signal transduction response regulator, receiver region; KEGG: req:REQ_18400 flp pilus assembly atpase cpae-like YP_004540806.1 PFAM: Type II secretion system protein E; KEGG: gob:Gobs_3422 type II secretion system protein E YP_004540807.1 PFAM: Type II secretion system F domain; KEGG: gob:Gobs_3421 type II secretion system F domain-containing protein YP_004540808.1 PFAM: Type II secretion system F domain; KEGG: gob:Gobs_3420 type II secretion system F domain-containing protein YP_004540809.1 PFAM: PspC; KEGG: xce:Xcel_0060 phage shock protein C, PspC YP_004540810.1 PFAM: Aminoglycoside phosphotransferase; KEGG: xce:Xcel_0072 aminoglycoside phosphotransferase YP_004540812.1 KEGG: sco:SCO4518 integral membrane protein YP_004540815.1 KEGG: cmi:CMM_0693 hypothetical protein YP_004540816.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: ske:Sked_01010 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal YP_004540817.1 KEGG: xce:Xcel_0075 hypothetical protein YP_004540818.1 PFAM: PilT protein, N-terminal; KEGG: azl:AZL_f00690 hypothetical protein YP_004540819.1 KEGG: ske:Sked_01240 hypothetical protein YP_004540820.1 KEGG: xce:Xcel_0083 LamB/YcsF family protein; HAMAP: UPF0271 protein ybgL; PFAM: LamB/YcsF YP_004540821.1 PFAM: peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: xce:Xcel_0084 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_004540822.1 PFAM: Protein of unknown function DUF2087; KEGG: cfl:Cfla_0964 protein of unknown function DUF2087 YP_004540823.1 PFAM: YbaK/aminoacyl-tRNA synthetase associated region; KEGG: xce:Xcel_2094 YbaK/prolyl-tRNA synthetase associated region YP_004540824.1 KEGG: xce:Xcel_0085 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS YP_004540825.1 KEGG: cfl:Cfla_3529 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004540826.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bad:BAD_1405 periplasmic binding (signal peptide) ABC transporter protein YP_004540827.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bll:BLJ_1931 binding-protein-dependent transporter inner membrane component YP_004540828.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bll:BLJ_1930 binding-protein-dependent transporter inner membrane component YP_004540829.1 PFAM: Alpha-L-arabinofuranosidase, C-terminal; KEGG: xce:Xcel_2782 alpha-N-arabinofuranosidase; SMART: Alpha-L-arabinofuranosidase, C-terminal YP_004540830.1 KEGG: nml:Namu_5047 hypothetical protein YP_004540831.1 KEGG: art:Arth_4010 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; D-arabinono-1,4-lactone oxidase YP_004540832.1 PFAM: Sodium:neurotransmitter symporter; KEGG: ske:Sked_01290 SNF family Na+-dependent transporter YP_004540834.1 KEGG: xce:Xcel_0087 extracellular solute-binding protein family 3 protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3 YP_004540835.1 KEGG: xce:Xcel_0100 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004540836.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0101 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004540838.1 PFAM: Excalibur calcium-binding domain; KEGG: xce:Xcel_0102 Excalibur domain-containing protein YP_004540839.1 TIGRFAM: RecB family nuclease, TM0106, KEGG: cfl:Cfla_3239 RecB family nuclease YP_004540840.1 KEGG: ske:Sked_02480 cold-shock DNA-binding protein family; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004540841.1 KEGG: cfl:Cfla_1913 2,5-didehydrogluconate reductase; PFAM: Aldo/keto reductase YP_004540842.1 PFAM: Extracellular ligand-binding receptor; KEGG: xce:Xcel_0104 extracellular ligand-binding receptor YP_004540843.1 KEGG: bcv:Bcav_2158 hypothetical protein YP_004540844.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0105 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004540845.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0106 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004540846.1 PFAM: Bacterial inner-membrane translocator; KEGG: xce:Xcel_0107 inner-membrane translocator YP_004540847.1 PFAM: Bacterial inner-membrane translocator; KEGG: xce:Xcel_0108 inner-membrane translocator YP_004540848.1 KEGG: cmi:CMM_2114 protease II (oligopeptidase B); PFAM: peptidase S9A, oligopeptidase, N-terminal beta-propeller; peptidase S9, prolyl oligopeptidase, catalytic domain YP_004540849.1 PFAM: phosphate transporter; KEGG: jde:Jden_2217 phosphate transporter YP_004540850.1 KEGG: jde:Jden_2216 hypothetical protein YP_004540851.1 KEGG: bcv:Bcav_3777 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 3, N-terminal YP_004540852.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: xce:Xcel_0111 activator of HSP90 ATPase 1 family protein YP_004540853.1 KEGG: xce:Xcel_0112 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004540854.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mts:MTES_0535 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004540855.1 PFAM: AMP-dependent synthetase/ligase; Alpha/beta hydrolase fold-1; KEGG: ske:Sked_36600 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_004540856.1 KEGG: ske:Sked_36590 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004540857.1 KEGG: sgr:SGR_1221 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2236 YP_004540858.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bcv:Bcav_1530 endonuclease/exonuclease/phosphatase YP_004540859.1 HAMAP: UPF0225 protein ychJ; KEGG: xce:Xcel_0877 sec-C motif domain-containing protein YP_004540860.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_0118 major facilitator superfamily protein YP_004540861.1 KEGG: bcv:Bcav_0666 hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; PFAM: Uncharacterised protein family UPF0060 YP_004540862.1 KEGG: nca:Noca_3102 hypothetical protein YP_004540863.1 KEGG: pjd:Pjdr2_5585 hypothetical protein YP_004540866.1 KEGG: xce:Xcel_0119 hypothetical protein YP_004540868.1 KEGG: kra:Krad_0625 hypothetical protein YP_004540870.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bcv:Bcav_0251 alpha/beta hydrolase fold protein YP_004540871.1 KEGG: ske:Sked_01080 sugar kinase, ribokinase; PFAM: carbohydrate/purine kinase YP_004540872.1 manually curated; TIGRFAM: DNA mismatch endonuclease vsr; KEGG: sgr:SGR_4677 DNA mismatch endonuclease; PFAM: DNA mismatch endonuclease vsr YP_004540873.1 TIGRFAM: DNA methylase, C-5 cytosine-specific; KEGG: mcd:MCRO_0336 cytosine-specific DNA modification methyltransferase; PFAM: DNA methylase, C-5 cytosine-specific YP_004540875.1 KEGG: cfl:Cfla_3251 hypothetical protein YP_004540876.1 KEGG: cfl:Cfla_3251 hypothetical protein YP_004540877.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ica:Intca_0898 hypothetical protein YP_004540878.1 PFAM: Uncharacterised protein family UPF0118; KEGG: aau:AAur_0601 permease YP_004540879.1 PFAM: peptidase M4, propeptide, PepSY; KEGG: mlu:Mlut_06340 peptidase propeptide domain-containing protein YP_004540880.1 KEGG: mjl:Mjls_2137 hypothetical protein YP_004540881.1 KEGG: svi:Svir_19290 hypothetical protein YP_004540882.1 KEGG: sro:Sros_8641 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004540883.1 KEGG: xce:Xcel_0134 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004540884.1 KEGG: xce:Xcel_0135 hypothetical protein YP_004540885.1 PFAM: Lipase, GDSL; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: scb:SCAB_70541 lipolytic protein YP_004540886.1 KEGG: bcv:Bcav_4089 V8-like Glu-specific endopeptidase YP_004540887.1 PFAM: transposase, IS116/IS110/IS902; transposase, IS111A/IS1328/IS1533; KEGG: mav:MAV_1059 transposase YP_004540888.1 KEGG: nca:Noca_1780 D-amino-acid oxidase; PFAM: FAD dependent oxidoreductase YP_004540889.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_1128 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004540890.1 KEGG: xce:Xcel_1127 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004540891.1 KEGG: xce:Xcel_1126 extracellular solute-binding protein family 3 protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3 YP_004540892.1 PFAM: NADPH-dependent FMN reductase; KEGG: cfl:Cfla_0467 NADPH-dependent FMN reductase YP_004540893.1 PFAM: Domain of unknown function DUF1994; KEGG: xce:Xcel_0136 Excalibur domain-containing protein YP_004540894.1 PFAM: phospholipase/carboxylesterase; KEGG: nca:Noca_2054 phospholipase/carboxylesterase YP_004540895.1 KEGG: xce:Xcel_0133 hypothetical protein; HAMAP: UPF0303 protein; PFAM: Protein of unknown function DUF336 YP_004540896.1 PFAM: Amidohydrolase 3; KEGG: cfl:Cfla_2956 amidohydrolase 3 YP_004540897.1 KEGG: cmi:CMM_2277 DNA-binding protein YP_004540898.1 KEGG: ske:Sked_16890 hypothetical protein YP_004540899.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xce:Xcel_0140 glyoxalase/bleomycin resistance protein/dioxygenase YP_004540900.1 KEGG: aau:AAur_0122 hypothetical protein YP_004540901.1 KEGG: aau:AAur_0123 protein of unknown function (DUF1469) YP_004540902.1 KEGG: cfl:Cfla_0556 hypothetical protein YP_004540903.1 KEGG: cfl:Cfla_0818 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN-related YP_004540904.1 KEGG: amv:ACMV_30760 hypothetical protein; PFAM: Fumarate lyase; adenylosuccinate lyase, C-terminal YP_004540905.1 KEGG: cfl:Cfla_3657 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004540906.1 PFAM: FAD dependent oxidoreductase; KEGG: cfl:Cfla_0385 FAD dependent oxidoreductase YP_004540907.1 PFAM: Major facilitator superfamily MFS-1; KEGG: stp:Strop_0632 major facilitator transporter YP_004540908.1 KEGG: ica:Intca_3489 esterase YP_004540909.1 KEGG: xce:Xcel_1117 hypothetical protein YP_004540910.1 PFAM: Amino acid permease-associated region; KEGG: xce:Xcel_0141 amino acid permease-associated region YP_004540911.1 KEGG: cfl:Cfla_3654 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004540912.1 KEGG: cfl:Cfla_3653 transcriptional regulator, ArsR family; PFAM: Protein-tyrosine phosphatase, low molecular weight; HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; Protein-tyrosine phosphatase, low molecular weight YP_004540913.1 KEGG: cfl:Cfla_3652 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter YP_004540914.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cfl:Cfla_3548 transcriptional regulator, TetR family YP_004540915.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0145 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004540916.1 KEGG: xce:Xcel_0146 hypothetical protein YP_004540917.1 PFAM: Amino acid permease-associated region; KEGG: cfl:Cfla_3325 amino acid permease-associated region YP_004540918.1 KEGG: ske:Sked_03390 NADH dehydrogenase, FAD-containing subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004540919.1 KEGG: ica:Intca_3295 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004540920.1 KEGG: xce:Xcel_2721 hypothetical protein YP_004540921.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: xce:Xcel_0154 membrane-flanked domain-containing protein YP_004540922.1 PFAM: phosphoglycerate mutase; KEGG: xce:Xcel_0155 phosphoglycerate mutase YP_004540923.1 PFAM: DSBA oxidoreductase; KEGG: ske:Sked_03790 dithiol-disulfide isomerase YP_004540925.1 KEGG: xce:Xcel_0159 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase-like protein YP_004540926.1 KEGG: xce:Xcel_0160 ribonuclease H; PFAM: ribonuclease H YP_004540927.1 PFAM: Protein of unknown function DUF125, transmembrane; KEGG: xce:Xcel_0161 hypothetical protein YP_004540928.1 KEGG: ske:Sked_35830 hypothetical protein YP_004540929.1 KEGG: vpe:Varpa_5168 hypothetical protein YP_004540930.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ske:Sked_01430 arabinose efflux permease family protein YP_004540931.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kfl:Kfla_3693 hypothetical protein YP_004540932.1 KEGG: xce:Xcel_0165 acetyltransferase-like protein YP_004540933.1 TIGRFAM: phosphoglucomutase, alpha-D-glucose specific; KEGG: xce:Xcel_0168 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004540934.1 KEGG: nfa:nfa1230 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_004540935.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: ahe:Arch_1028 Na+/H+ antiporter NhaC YP_004540937.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ske:Sked_16840 short-chain dehydrogenase, teichoic and lipoteichoic acid D-alanine esterification YP_004540938.1 SMART: Helix-turn-helix type 3; KEGG: amd:AMED_3567 XRE family transcriptional regulator YP_004540939.1 TIGRFAM: adenylosuccinate lyase; KEGG: xce:Xcel_3228 adenylosuccinate lyase; PFAM: adenylosuccinate lyase C-terminal; Fumarate lyase YP_004540941.1 PFAM: Membrane protein of unknown function; KEGG: xce:Xcel_3225 membrane protein YP_004540942.1 PFAM: Aminotransferase, class I/II; TIGRFAM: histidinol-phosphate aminotransferase; HAMAP: histidinol-phosphate aminotransferase; KEGG: xce:Xcel_3224 histidinol-phosphate aminotransferase YP_004540943.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mts:MTES_0068 nucleoside-diphosphate-sugar epimerase YP_004540944.1 TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: ica:Intca_0540 transcriptional regulator, MerR family; SMART: HTH transcriptional regulator, MerR YP_004540945.1 PFAM: transketolase, N-terminal; KEGG: sen:SACE_5763 transketolase YP_004540946.1 PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal; KEGG: nda:Ndas_4002 transketolase YP_004540947.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_18860 carbohydrate ABC transporter membrane protein YP_004540948.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_2243 binding-protein-dependent transport systems inner membrane component YP_004540949.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_18880 carbohydrate-binding protein YP_004540950.1 KEGG: cfl:Cfla_3495 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase YP_004540951.1 TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit subgroup x; KEGG: xce:Xcel_3223 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; PFAM: Dehydrogenase, E1 component YP_004540952.1 KEGG: xce:Xcel_3222 transketolase central region; PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal YP_004540953.1 KEGG: xce:Xcel_3221 hypothetical protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004540954.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; Copper resistance D; KEGG: xce:Xcel_3220 copper resistance D domain-containing protein YP_004540955.1 KEGG: fri:FraEuI1c_5950 FAD dependent oxidoreductase; TIGRFAM: FAD-dependent oxidoreductase, HpnW; PFAM: FAD dependent oxidoreductase YP_004540956.1 KEGG: ske:Sked_35650 dipeptidyl aminopeptidase/acylaminoacyl peptidase YP_004540957.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_3219 TetR family transcriptional regulator YP_004540958.1 PFAM: MMPL; KEGG: xce:Xcel_3218 MmpL domain-containing protein YP_004540959.1 TIGRFAM: Phage infection protein, YhgE, N-terminal; KEGG: xce:Xcel_3217 YhgE/Pip N-terminal domain-containing protein YP_004540960.1 KEGG: xce:Xcel_3216 hypothetical protein YP_004540961.1 KEGG: xce:Xcel_3215 hypothetical protein YP_004540962.1 KEGG: xce:Xcel_2045 hypothetical protein YP_004540963.1 PFAM: transposase, IS116/IS110/IS902; transposase, IS111A/IS1328/IS1533; KEGG: mav:MAV_1059 transposase YP_004540964.1 KEGG: xce:Xcel_3214 2,5-didehydrogluconate reductase; PFAM: Aldo/keto reductase YP_004540965.1 KEGG: xce:Xcel_3211 hypothetical protein YP_004540967.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat; KEGG: ske:Sked_35610 thiol-disulfide isomerase-like thioredoxin YP_004540968.1 KEGG: gym:GYMC10_0556 asparaginase/glutaminase; PFAM: Asparaginase/glutaminase YP_004540969.1 PFAM: carbohydrate/purine kinase; KEGG: xce:Xcel_1009 PfkB domain-containing protein YP_004540971.1 KEGG: xce:Xcel_3204 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_004540972.1 manually curated; KEGG: cfl:Cfla_2853 transcriptional regulator YP_004540973.1 PFAM: Polyketide cyclase/dehydrase; KEGG: kfl:Kfla_1531 beta-lactamase domain-containing protein YP_004540974.1 KEGG: xce:Xcel_3203 PTS system, glucose subfamily, IIA subunit; TIGRFAM: phosphotransferase system, sugar-specific permease EIIA 1 domain; PFAM: phosphotransferase system, sugar-specific permease EIIA 1 domain YP_004540975.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: xce:Xcel_3202 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; PEP-utilising enzyme, mobile region; phosphotransferase system, PEP-utilising enzyme, N-terminal YP_004540976.1 KEGG: xce:Xcel_3201 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphotransferase system, phosphocarrier HPr protein; PFAM: phosphotransferase system, phosphocarrier HPr protein YP_004540977.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: xce:Xcel_3200 xylose isomerase domain-containing protein YP_004540978.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_3195 TetR family transcriptional regulator YP_004540979.1 KEGG: xce:Xcel_3194 hypothetical protein YP_004540980.1 KEGG: xce:Xcel_3192 hypothetical protein YP_004540981.1 PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: xce:Xcel_3190 pirin domain-containing protein YP_004540982.1 TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: cfl:Cfla_0147 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain YP_004540983.1 KEGG: xce:Xcel_3188 hypothetical protein YP_004540984.1 KEGG: xce:Xcel_3187 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein YP_004540985.1 PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: xce:Xcel_3186 NADH-ubiquinone oxidoreductase subunit 4L YP_004540986.1 KEGG: ske:Sked_35440 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter subunit MnhD; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase YP_004540987.1 KEGG: xce:Xcel_3184 multisubunit Na+/H+ antiporter MnhE subunit-like protein YP_004540988.1 PFAM: Multiple resistance and pH regulation protein F; KEGG: xce:Xcel_3183 multiple resistance and pH regulation protein F YP_004540989.1 KEGG: xce:Xcel_3182 monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit YP_004540990.1 KEGG: xce:Xcel_3181 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_004540991.1 KEGG: xce:Xcel_3180 AraC family transcriptional regulator; PFAM: Ada DNA repair, metal-binding; Helix-turn-helix, AraC type; AlkA, N-terminal; HhH-GPD domain; SMART: Helix-turn-helix, AraC domain; HhH-GPD domain YP_004540992.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_3164 alpha/beta hydrolase fold protein YP_004540993.1 KEGG: jde:Jden_2432 hypothetical protein YP_004540994.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: xce:Xcel_3161 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core YP_004540995.1 KEGG: cfl:Cfla_0547 hypothetical protein YP_004540996.1 KEGG: xce:Xcel_3155 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004540997.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: xce:Xcel_3148 short-chain dehydrogenase/reductase SDR YP_004540998.1 PFAM: phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: xce:Xcel_3147 orotate phosphoribosyltransferase YP_004540999.1 KEGG: mil:ML5_6072 hypothetical protein YP_004541000.1 manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; KEGG: xce:Xcel_3145 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase YP_004541001.1 PFAM: Protein of unknown function DUF368; KEGG: tfu:Tfu_2249 hypothetical protein YP_004541002.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cfl:Cfla_2970 tRNA/rRNA methyltransferase (SpoU) YP_004541003.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: xce:Xcel_3142 fructose-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II YP_004541004.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: xce:Xcel_3141 anti-sigma-factor antagonist YP_004541005.1 TIGRFAM: PAS; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; ATP-binding region, ATPase-like; KEGG: xce:Xcel_3140 protein serine/threonine phosphatase; SMART: Protein phosphatase 2C-related YP_004541006.1 KEGG: fal:FRAAL6659 hypothetical protein YP_004541007.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ske:Sked_35180 anti-anti-sigma regulatory factor YP_004541008.1 KEGG: xce:Xcel_3138 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; HAMAP: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_004541009.1 PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: phosphoribosylglycinamide synthetase; HAMAP: phosphoribosylglycinamide synthetase; KEGG: xce:Xcel_3134 phosphoribosylamine/glycine ligase YP_004541010.1 PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: xce:Xcel_3133 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004541011.1 KEGG: ami:Amir_5783 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding YP_004541012.1 PFAM: Collagen-binding surface protein Cna-like, B region; KEGG: ica:Intca_2217 Cna B domain protein YP_004541013.1 TIGRFAM: phosphoribosylformylglycinamidine synthetase, PurS subunit; KEGG: xce:Xcel_3127 phosphoribosylformylglycinamidine synthase PurS YP_004541014.1 PFAM: CobB/CobQ-like glutamine amidotransferase; TIGRFAM: phosphoribosylformylglycinamidine synthase I; HAMAP: phosphoribosylformylglycinamidine synthase 1; KEGG: cfl:Cfla_2954 phosphoribosylformylglycinamidine synthase I YP_004541015.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_3590 GCN5-related protein N-acetyltransferase YP_004541016.1 KEGG: apn:Asphe3_23950 Zn-dependent hydrolase, glyoxylase YP_004541017.1 PFAM: PilT protein, N-terminal; KEGG: rhi:NGR_b14010 hypothetical protein YP_004541018.1 TIGRFAM: Prevent-host-death protein; KEGG: hha:Hhal_0788 prevent-host-death family protein YP_004541019.1 TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: xce:Xcel_3120 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004541020.1 SMART: Rhodanese-like; KEGG: xce:Xcel_3119 rhodanese domain-containing protein YP_004541021.1 KEGG: xce:Xcel_3118 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004541022.1 PFAM: Amidase; KEGG: ske:Sked_11510 Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A YP_004541023.1 KEGG: mts:MTES_2593 acetyltransferase, including N-acetylase of ribosomal proteins YP_004541024.1 PFAM: Luciferase-like, subgroup; KEGG: tcu:Tcur_3798 luciferase-like monooxygenase YP_004541025.1 PFAM: MaoC-like dehydratase; KEGG: xce:Xcel_3115 MaoC domain-containing protein dehydratase YP_004541026.1 KEGG: xce:Xcel_3114 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004541027.1 KEGG: xce:Xcel_3113 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004541028.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_3112 TetR family transcriptional regulator YP_004541029.1 KEGG: xce:Xcel_3111 acyl-CoA oxidase domain-containing protein; PFAM: acyl-CoA oxidase/dehydrogenase, central region; acyl-CoA dehydrogenase, N-terminal; acyl-CoA oxidase/dehydrogenase, type 1; acyl-CoA oxidase, C-terminal YP_004541030.1 KEGG: xce:Xcel_3110 hypothetical protein YP_004541031.1 PFAM: Domain of unknown function DUF1851; KEGG: xce:Xcel_3109 hypothetical protein YP_004541032.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: ach:Achl_0808 protein of unknown function DUF6 transmembrane YP_004541033.1 PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: phosphoribosylformylglycinamidine synthase II; HAMAP: phosphoribosylformylglycinamidine synthase 2; KEGG: xce:Xcel_3107 phosphoribosylformylglycinamidine synthase II YP_004541035.1 KEGG: xce:Xcel_3101 hypothetical protein YP_004541036.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: xce:Xcel_3100 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type YP_004541037.1 PFAM: ribonuclease II/R; KEGG: xce:Xcel_3093 ribonuclease II YP_004541038.1 KEGG: xce:Xcel_3092 hypothetical protein YP_004541039.1 KEGG: xce:Xcel_3091 5'-nucleotidase domain-containing protein; PFAM: Endonuclease/exonuclease/phosphatase; carbohydrate-binding domain, family 5/12; SMART: carbohydrate-binding domain, family 5/12 YP_004541040.1 KEGG: xce:Xcel_3090 hypothetical protein YP_004541041.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: xce:Xcel_3089 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase YP_004541042.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: xce:Xcel_3088 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein YP_004541043.1 KEGG: xce:Xcel_3087 hypothetical protein YP_004541044.1 KEGG: xce:Xcel_3086 excisionase family DNA binding domain-containing protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: HTH transcriptional regulator, MerR YP_004541045.1 KEGG: xce:Xcel_3085 hypothetical protein YP_004541046.1 KEGG: xce:Xcel_3084 hypothetical protein YP_004541047.1 PFAM: Protein of unknown function DUF1025; KEGG: xce:Xcel_3083 hypothetical protein YP_004541048.1 PFAM: peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: xce:Xcel_3081 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_004541049.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mts:MTES_1152 hypothetical protein YP_004541050.1 PFAM: Mechanosensitive ion channel MscS; KEGG: ske:Sked_33880 small-conductance mechanosensitive channel YP_004541051.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ske:Sked_18890 glycerophosphoryl diester phosphodiesterase YP_004541053.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: amd:AMED_8967 hypothetical protein YP_004541055.1 PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: jde:Jden_1631 restriction endonuclease YP_004541056.1 PFAM: ABC transporter-like; KEGG: sco:SCO0700 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004541057.1 PFAM: FeS cluster biogenesis; KEGG: xce:Xcel_0286 HesB/YadR/YfhF-family protein YP_004541058.1 KEGG: xce:Xcel_0291 hypothetical protein YP_004541059.1 KEGG: ske:Sked_33700 DNA/RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541060.1 PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: peptide methionine sulfoxide reductase msrB; KEGG: xce:Xcel_0293 methionine-R-sulfoxide reductase YP_004541061.1 KEGG: xce:Xcel_0295 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004541062.1 PFAM: Aldo/keto reductase; KEGG: cfl:Cfla_3459 aldo/keto reductase YP_004541063.1 KEGG: xce:Xcel_0296 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004541064.1 KEGG: cfl:Cfla_2820 sugar transporter; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter YP_004541065.1 KEGG: xce:Xcel_0298 hypothetical protein YP_004541066.1 PFAM: Putitive phosphate transport regulator; KEGG: cfl:Cfla_2818 Putitive phosphate transport regulator YP_004541067.1 PFAM: phosphate transporter; KEGG: ske:Sked_33540 phosphate/sulfate permease YP_004541068.1 KEGG: xce:Xcel_2602 hypothetical protein YP_004541069.1 PFAM: NUDIX hydrolase domain; phosphoglycerate mutase; KEGG: xce:Xcel_0301 NUDIX hydrolase YP_004541070.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: xce:Xcel_0302 polyphosphate kinase YP_004541071.1 KEGG: xce:Xcel_0316 mycothiol biosynthesis acetyltransferase; TIGRFAM: Mycothiol biosynthesis protein, MshD; PFAM: GCN5-related N-acetyltransferase YP_004541072.1 PFAM: AMP-dependent synthetase/ligase; TIGRFAM: acetate--CoA ligase; HAMAP: acetyl-coenzyme A synthetase; KEGG: xce:Xcel_0318 acetate/CoA ligase YP_004541073.1 KEGG: xce:Xcel_0320 HAD-superfamily subfamily IB hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase YP_004541074.1 KEGG: xce:Xcel_0321 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004541075.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_0322 major facilitator superfamily protein YP_004541076.1 KEGG: xce:Xcel_0323 flp pilus assembly protein FlpE YP_004541077.1 KEGG: xce:Xcel_0324 type II secretion system protein E; TIGRFAM: helicase/secretion neighborhood ATPase; PFAM: Type II secretion system protein E YP_004541078.1 KEGG: xce:Xcel_0325 hypothetical protein YP_004541079.1 PFAM: Type II secretion system F domain; KEGG: xce:Xcel_0326 type II secretion system protein YP_004541080.1 KEGG: xce:Xcel_0327 hypothetical protein YP_004541081.1 PFAM: TadE-like; KEGG: xce:Xcel_0328 hypothetical protein YP_004541082.1 TIGRFAM: helicase/secretion neighborhood TadE-like protein; KEGG: xce:Xcel_0329 GAF sensor signal transduction histidine kinase YP_004541083.1 PFAM: HpcH/HpaI aldolase; KEGG: gob:Gobs_4340 HpcH/HpaI aldolase YP_004541084.1 TIGRFAM: helicase/secretion neighborhood DEAH-box helicase; PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: xce:Xcel_0330 DEAD/DEAH box helicase domain-containing protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541085.1 KEGG: xce:Xcel_0333 aspartyl aminopeptidase; PFAM: peptidase M18, aminopeptidase I YP_004541086.1 KEGG: xce:Xcel_0334 hypothetical protein YP_004541087.1 KEGG: xce:Xcel_0335 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004541088.1 KEGG: psa:PST_0375 arsenical pump-driving ATPase; PFAM: ATPase, anion-transporting YP_004541089.1 KEGG: psa:PST_0376 superfamily II DNA helicase YP_004541090.1 PFAM: carbon starvation protein CstA; KEGG: kse:Ksed_03070 carbon starvation protein, membrane protein YP_004541091.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: Inorganic H+ pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; KEGG: xce:Xcel_0336 V-type H(+)-translocating pyrophosphatase YP_004541092.1 PFAM: Protein of unknown function DUF664; KEGG: xce:Xcel_0339 hypothetical protein YP_004541093.1 KEGG: amd:AMED_8470 hypothetical protein YP_004541094.1 KEGG: bha:BH3865 hypothetical protein; PFAM: peptidase M14, carboxypeptidase A; SMART: peptidase M14, carboxypeptidase A YP_004541095.1 KEGG: bfa:Bfae_31480 hypothetical protein YP_004541096.1 PFAM: Protein of unknown function DUF664; KEGG: xce:Xcel_0339 hypothetical protein YP_004541097.1 KEGG: xce:Xcel_0340 hypothetical protein YP_004541098.1 KEGG: xce:Xcel_0341 hypothetical protein YP_004541099.1 PFAM: Methyltransferase small; KEGG: xce:Xcel_0342 methyltransferase small YP_004541100.1 KEGG: kra:Krad_1911 hydrolase of the alpha/beta superfamily protein YP_004541101.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: kfl:Kfla_4017 LysR family transcriptional regulator YP_004541102.1 KEGG: sro:Sros_2479 streptogrisin C; PFAM: peptidase S1/S6, chymotrypsin/Hap YP_004541103.1 PFAM: Beta-lactamase-related; KEGG: kra:Krad_0951 beta-lactamase YP_004541104.1 KEGG: xce:Xcel_0343 phosphoesterase PA-phosphatase related protein; PFAM: phosphatidic acid phosphatase type 2/haloperoxidase; SMART: phosphatidic acid phosphatase type 2/haloperoxidase YP_004541105.1 KEGG: bcv:Bcav_3075 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541106.1 KEGG: bcv:Bcav_3076 beta-galactosidase; PFAM: glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal YP_004541107.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bcv:Bcav_3077 extracellular solute-binding protein family 1 YP_004541108.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3078 fructose-bisphosphate aldolase YP_004541109.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3079 binding-protein-dependent transport systems inner membrane component YP_004541110.1 PFAM: glycosyl hydrolase 53; Bacterial Ig-related; carbohydrate-binding, CenC-like; carbohydrate-binding domain, family 5/12; KEGG: bcv:Bcav_3080 arabinogalactan endo-1,4-beta-galactosidase; SMART: carbohydrate-binding domain, family 5/12 YP_004541111.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: xce:Xcel_0344 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain YP_004541112.1 KEGG: jde:Jden_0099 hypothetical protein YP_004541113.1 KEGG: ske:Sked_32610 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004541114.1 KEGG: xce:Xcel_0352 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal YP_004541115.1 KEGG: ske:Sked_07150 hypothetical protein YP_004541116.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: xce:Xcel_0353 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004541117.1 PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: ske:Sked_32590 thymidylate kinase YP_004541118.1 KEGG: xce:Xcel_0355 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: ATPase, AAA+ type, core YP_004541119.1 PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; Crotonase, core; KEGG: sna:Snas_4501 formyl transferase domain-containing protein YP_004541120.1 KEGG: bcv:Bcav_0685 hypothetical protein YP_004541121.1 PFAM: peptidase S33, tripeptidyl-peptidase C-terminal; Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_0356 TAP domain-containing protein YP_004541122.1 PFAM: Metallophosphoesterase; KEGG: ica:Intca_2881 metallophosphoesterase YP_004541123.1 KEGG: cwo:Cwoe_2455 4'-phosphopantetheinyl transferase YP_004541124.1 KEGG: msm:MSMEG_2469 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004541125.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mjl:Mjls_1962 extracellular solute-binding protein YP_004541126.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2027 binding-protein-dependent transport systems inner membrane component YP_004541127.1 PFAM: ABC transporter-like; transport-associated OB, type 2; KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; SMART: ATPase, AAA+ type, core YP_004541128.1 PFAM: Uncharacterised protein family UPF0027; KEGG: kra:Krad_1410 hypothetical protein YP_004541129.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: cms:CMS_1851 serine/threonine-protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004541131.1 KEGG: kra:Krad_3736 hypothetical protein YP_004541132.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: xce:Xcel_2823 hypothetical protein YP_004541133.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_2822 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004541134.1 KEGG: azc:AZC_0251 phage SPO1 DNA polymerase-related protein YP_004541135.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: xce:Xcel_0358 peptide deformylase YP_004541136.1 KEGG: ace:Acel_2033 glycosyl hydrolase family chitinase YP_004541137.1 KEGG: xce:Xcel_0359 hydrolase of the alpha/beta-hydrolase fold family YP_004541138.1 PFAM: Pentapeptide repeat; KEGG: xce:Xcel_0360 pentapeptide repeat-containing protein YP_004541139.1 PFAM: UspA; KEGG: xce:Xcel_0361 UspA domain-containing protein YP_004541140.1 KEGG: xce:Xcel_0362 hypothetical protein YP_004541141.1 manually curated; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; KEGG: xce:Xcel_0363 ATPase AAA-2 domain-containing protein; SMART: ATPase, AAA+ type, core YP_004541142.1 KEGG: cfl:Cfla_1452 haloacid dehalogenase domain protein hydrolase; PFAM: Haloacid dehalogenase-like hydrolase YP_004541143.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: xce:Xcel_0365 NAD-dependent epimerase/dehydratase YP_004541144.1 KEGG: xce:Xcel_0906 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR, N-terminal; transcriptional regulator IclR, C-terminal; SMART: transcriptional regulator IclR, N-terminal YP_004541145.1 TIGRFAM: KDPG/KHG aldolase; KEGG: xce:Xcel_0907 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase YP_004541146.1 PFAM: carbohydrate/purine kinase; KEGG: ske:Sked_27180 sugar kinase, ribokinase YP_004541147.1 KEGG: xce:Xcel_0366 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541148.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3325 binding-protein-dependent transport systems inner membrane component YP_004541149.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3324 binding-protein-dependent transport systems inner membrane component YP_004541150.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bcv:Bcav_3323 extracellular solute-binding protein family 1 YP_004541151.1 KEGG: ske:Sked_33180 beta-xylosidase; PFAM: glycoside hydrolase, family 39 YP_004541152.1 KEGG: ami:Amir_1977 glycosyltransferase 36 YP_004541153.1 PFAM: Ferritin/Dps protein; KEGG: rsa:RSal33209_2231 ferritin family protein YP_004541154.1 KEGG: xce:Xcel_0371 alpha-glucuronidase; PFAM: glycosyl hydrolase 67 middle; glycosyl hydrolase 67, C-terminal YP_004541155.1 KEGG: ske:Sked_05310 glucuronate isomerase; PFAM: Uronate isomerase YP_004541156.1 KEGG: xce:Xcel_0372 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541157.1 KEGG: xce:Xcel_2666 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal YP_004541158.1 PFAM: glycosyl hydrolase, family 13, catalytic region; KEGG: cfl:Cfla_3225 alpha amylase catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004541159.1 TIGRFAM: Glucose-6-phosphate dehydrogenase-related, F420-dependent; KEGG: sro:Sros_7870 dehydrogenase protein YP_004541160.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_05420 sugar ABC transporter periplasmic protein YP_004541161.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0898 binding-protein-dependent transport systems inner membrane component YP_004541162.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_05440 carbohydrate ABC transporter membrane protein YP_004541163.1 KEGG: xce:Xcel_0900 hypothetical protein YP_004541164.1 KEGG: apn:Asphe3_04010 FG-GAP repeat protein YP_004541165.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: ske:Sked_05530 dehydrogenase YP_004541166.1 KEGG: ske:Sked_05540 hypothetical protein YP_004541167.1 PFAM: Cupin 2, conserved barrel; KEGG: cfl:Cfla_3034 cupin 2 conserved barrel domain protein YP_004541168.1 KEGG: ske:Sked_06640 beta-galactosidase; PFAM: glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal YP_004541169.1 KEGG: xce:Xcel_0880 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541170.1 PFAM: Rhamnose mutarotase; KEGG: xce:Xcel_0885 hypothetical protein YP_004541171.1 KEGG: xce:Xcel_0886 L-rhamnose isomerase; TIGRFAM: Rhamnose isomerase related; PFAM: Xylose isomerase, TIM barrel domain YP_004541172.1 KEGG: fri:FraEuI1c_3439 alpha/beta hydrolase fold-3 domain protein YP_004541173.1 TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; KEGG: xce:Xcel_0887 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; Short-chain dehydrogenase/reductase SDR YP_004541174.1 KEGG: xce:Xcel_2655 carbohydrate kinase FGGY; PFAM: carbohydrate kinase, FGGY, N-terminal YP_004541175.1 PFAM: ATP-binding region, ATPase-like; KEGG: ske:Sked_11800 histidine kinase YP_004541176.1 KEGG: bcv:Bcav_0784 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004541177.1 KEGG: ske:Sked_13140 bacteriophytochrome; PFAM: Sporulation stage II, protein E C-terminal; GAF; PAS fold-2; Phytochrome, central region; SMART: Protein phosphatase 2C-related; GAF YP_004541178.1 PFAM: ATP-binding region, ATPase-like; KEGG: ske:Sked_11800 histidine kinase YP_004541179.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ske:Sked_13130 anti-anti-sigma regulatory factor YP_004541180.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: xce:Xcel_0895 xylose isomerase domain-containing protein YP_004541181.1 PFAM: Protein of unknown function DUF993; KEGG: bcv:Bcav_3366 protein of unknown function DUF993 YP_004541182.1 PFAM: Oxidoreductase, N-terminal; KEGG: apn:Asphe3_23040 dehydrogenase YP_004541183.1 KEGG: xce:Xcel_0888 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004541184.1 PFAM: glycosyl transferase, group 1; KEGG: xce:Xcel_0373 glycosyl transferase group 1 protein YP_004541185.1 KEGG: ske:Sked_05090 hypothetical protein YP_004541186.1 PFAM: glycoside hydrolase, family 10; KEGG: tfu:Tfu_2791 xylanase; SMART: glycoside hydrolase, family 10 YP_004541187.1 PFAM: Protein of unknown function DUF162; KEGG: xce:Xcel_0889 hypothetical protein YP_004541188.1 KEGG: xce:Xcel_0890 iron-sulfur cluster binding protein; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Protein of unknown function DUF162 YP_004541189.1 PFAM: Cysteine-rich region, CCG; KEGG: xce:Xcel_0891 hypothetical protein YP_004541190.1 KEGG: xce:Xcel_0375 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004541191.1 SMART: Protein of unknown function SprT; KEGG: nca:Noca_3805 protein of unknown function SprT YP_004541192.1 KEGG: pjd:Pjdr2_5542 lipolytic protein G-D-S-L family YP_004541193.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: ach:Achl_2367 3-oxoacyl-ACP synthase III YP_004541194.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: xce:Xcel_2657 oxidoreductase domain-containing protein YP_004541195.1 PFAM: Pectate lyase/Amb allergen; KEGG: nda:Ndas_5013 pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_004541196.1 PFAM: Oxidoreductase, N-terminal; KEGG: ske:Sked_05210 dehydrogenase YP_004541197.1 KEGG: bfa:Bfae_29250 transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004541198.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_05250 carbohydrate ABC transporter membrane protein YP_004541199.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_05240 carbohydrate ABC transporter membrane protein YP_004541200.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: tfu:Tfu_1702 sugar-binding protein YP_004541201.1 KEGG: xce:Xcel_2533 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain YP_004541202.1 PFAM: Aldo/keto reductase; KEGG: xce:Xcel_0377 aldo/keto reductase YP_004541203.1 PFAM: carbohydrate/purine kinase; KEGG: xce:Xcel_0378 PfkB domain-containing protein YP_004541204.1 KEGG: msm:MSMEG_6800 fructose transport system kinase YP_004541205.1 KEGG: xce:Xcel_2096 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type, C-terminal; SMART: transcription regulator, AsnC-type YP_004541206.1 TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit subgroup x; KEGG: xce:Xcel_2097 pyruvate dehydrogenase (acetyl-transferring); PFAM: Dehydrogenase, E1 component YP_004541207.1 KEGG: xce:Xcel_2098 transketolase central region; PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal YP_004541208.1 KEGG: xce:Xcel_2099 hypothetical protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004541209.1 KEGG: xce:Xcel_2100 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_004541210.1 KEGG: xce:Xcel_2101 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: carbamoyl phosphate synthetase, large subunit, ATP-binding; carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment YP_004541211.1 KEGG: xce:Xcel_2102 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA oxidase/dehydrogenase, type 1; acyl-CoA dehydrogenase, N-terminal; acyl-CoA oxidase/dehydrogenase, central region YP_004541212.1 PFAM: MaoC-like dehydratase; KEGG: xce:Xcel_2103 MaoC domain-containing protein dehydratase YP_004541213.1 KEGG: xce:Xcel_2104 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase YP_004541214.1 KEGG: xce:Xcel_0382 hypothetical protein YP_004541215.1 KEGG: nda:Ndas_2661 bifunctional deaminase-reductase domain protein YP_004541216.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: xce:Xcel_0383 tRNA/rRNA methyltransferase SpoU YP_004541217.1 HAMAP: phosphoenolpyruvate carboxykinase, GTP-utilising; KEGG: xce:Xcel_0386 phosphoenolpyruvate carboxykinase (GTP); PFAM: phosphoenolpyruvate carboxykinase, GTP-utilising YP_004541218.1 KEGG: xce:Xcel_0387 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004541219.1 KEGG: mil:ML5_4512 hypothetical protein YP_004541221.1 KEGG: ske:Sked_06790 prolyl aminopeptidase 2; PFAM: Alpha/beta hydrolase fold-1 YP_004541222.1 PFAM: carbohydrate kinase, FGGY, N-terminal; carbohydrate kinase, FGGY, C-terminal; TIGRFAM: glycerol kinase; HAMAP: glycerol kinase; KEGG: xce:Xcel_0389 glycerol kinase YP_004541223.1 PFAM: Major intrinsic protein; KEGG: cfl:Cfla_0559 major intrinsic protein YP_004541224.1 KEGG: xce:Xcel_0391 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004541225.1 PFAM: sugar-binding region; KEGG: ske:Sked_06830 transcriptional regulator YP_004541226.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cfl:Cfla_0562 GCN5-related N-acetyltransferase YP_004541227.1 KEGG: xce:Xcel_0394 HhH-GPD family protein; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif YP_004541229.1 KEGG: xce:Xcel_0395 hypothetical protein YP_004541230.1 KEGG: xce:Xcel_0396 hypothetical protein; HAMAP: DNA integrity scanning protein disA; PFAM: DNA integrity scanning protein, DisA, N-terminal; DNA integrity scanning, DisA, linker region; Helix-hairpin-helix motif YP_004541231.1 TIGRFAM: DNA repair protein RadA; PFAM: DNA helicase, DnaB-like, C-terminal; KEGG: xce:Xcel_0397 DNA repair protein RadA; SMART: ATPase, AAA+ type, core YP_004541232.1 KEGG: xce:Xcel_0398 hypothetical protein YP_004541233.1 TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: xce:Xcel_0399 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_004541234.1 PFAM: ABC-2 type transporter; KEGG: xce:Xcel_0418 ABC-2 type transporter YP_004541235.1 PFAM: Regulator of K+ conductance, N-terminal; KEGG: cfl:Cfla_2747 TrkA-N domain protein YP_004541236.1 KEGG: ske:Sked_06990 trk-type K+ transport system, membrane component; PFAM: Cation transporter YP_004541237.1 KEGG: xce:Xcel_0430 histone deacetylase superfamily; PFAM: histone deacetylase superfamily YP_004541238.1 KEGG: mcu:HMPREF0573_10552 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1713, mitochondria YP_004541239.1 KEGG: xce:Xcel_0438 HAD-superfamily subfamily IB hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase YP_004541241.1 PFAM: glutaredoxin 2; KEGG: xce:Xcel_0439 glutaredoxin 2 YP_004541242.1 KEGG: xce:Xcel_0440 CoA-binding domain-containing protein; HAMAP: Redox-sensing transcriptional repressor rex; PFAM: CoA-binding; Rex DNA-binding, C-terminal YP_004541243.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: xce:Xcel_0441 YceI family protein YP_004541244.1 KEGG: xce:Xcel_0442 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004541245.1 KEGG: aeh:Mlg_1635 transmembrane anti-sigma factor YP_004541246.1 PFAM: phosphoglycerate mutase; KEGG: xce:Xcel_0443 phosphoglycerate mutase YP_004541247.1 PFAM: Redoxin; KEGG: xce:Xcel_0444 redoxin domain-containing protein YP_004541248.1 PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: xce:Xcel_0445 cytochrome c biogenesis protein transmembrane region YP_004541249.1 PFAM: ResB-like; KEGG: xce:Xcel_0446 ResB family protein YP_004541250.1 KEGG: xce:Xcel_0447 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein YP_004541251.1 KEGG: xce:Xcel_0448 hypothetical protein YP_004541252.1 KEGG: xce:Xcel_0449 hypothetical protein YP_004541253.1 KEGG: xce:Xcel_0450 1,4-dihydroxy-2-naphthoateoctaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_004541254.1 KEGG: xce:Xcel_0451 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004541255.1 TIGRFAM: Naphthoate synthase; KEGG: xce:Xcel_0455 naphthoate synthase; PFAM: Crotonase, core YP_004541257.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: xce:Xcel_0457 mandelate racemase/muconate lactonizing protein YP_004541258.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; TIGRFAM: Menaquinone biosynthesis protein MenD; KEGG: xce:Xcel_0458 thiamine pyrophosphate protein TPP binding domain-containing protein; HAMAP: Menaquinone biosynthesis protein MenD YP_004541259.1 KEGG: xce:Xcel_0459 2-alkenal reductase; PFAM: peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_004541260.1 TIGRFAM: Isochorismate synthase; KEGG: xce:Xcel_0466 isochorismate synthase; PFAM: Chorismate binding, C-terminal YP_004541261.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: xce:Xcel_0467 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004541262.1 KEGG: cfl:Cfla_3199 hypothetical protein YP_004541263.1 KEGG: xce:Xcel_0468 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD dependent oxidoreductase YP_004541264.1 KEGG: xce:Xcel_0469 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YP_004541265.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: xce:Xcel_0470 NADH-quinone oxidoreductase subunit B YP_004541266.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: xce:Xcel_0471 NADH (or F420H2) dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit YP_004541267.1 PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: xce:Xcel_0472 NADH dehydrogenase I subunit D YP_004541268.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: cfl:Cfla_2712 NADH-quinone oxidoreductase, E subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit YP_004541269.1 TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: xce:Xcel_0474 NADH-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004541270.1 TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: xce:Xcel_0475 NADH-quinone oxidoreductase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region YP_004541271.1 HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: xce:Xcel_0476 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone oxidoreductase, subunit 1 YP_004541272.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: xce:Xcel_0477 NADH-quinone oxidoreductase subunit I YP_004541273.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: xce:Xcel_0478 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_004541274.1 KEGG: xce:Xcel_0479 NADH-ubiquinone oxidoreductase subunit 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L YP_004541275.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: xce:Xcel_0480 proton-translocating NADH-quinone oxidoreductase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YP_004541276.1 TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: xce:Xcel_0481 proton-translocating NADH-quinone oxidoreductase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase YP_004541277.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: xce:Xcel_0482 proton-translocating NADH-quinone oxidoreductase subunit N YP_004541278.1 KEGG: xce:Xcel_0483 polyprenyl synthetase; PFAM: Polyprenyl synthetase YP_004541279.1 KEGG: xce:Xcel_0427 fibronectin type III domain-containing protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III YP_004541280.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: xce:Xcel_0485 ATPase YP_004541281.1 PFAM: Protein of unknown function DUF58; KEGG: xce:Xcel_0486 hypothetical protein YP_004541282.1 KEGG: xce:Xcel_0487 transglutaminase domain-containing protein; PFAM: transglutaminase-like; SMART: transglutaminase-like YP_004541283.1 PFAM: RDD; Forkhead-associated; KEGG: xce:Xcel_0488 FHA domain containing protein YP_004541284.1 KEGG: xce:Xcel_0489 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related YP_004541285.1 PFAM: Forkhead-associated; KEGG: xce:Xcel_0490 FHA domain containing protein YP_004541286.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: xce:Xcel_0491 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004541287.1 KEGG: ske:Sked_07560 hypothetical protein YP_004541289.1 KEGG: cfl:Cfla_1419 FHA domain containing protein; PFAM: Cell divisionFtsK/SpoIIIE; Forkhead-associated; SMART: Forkhead-associated; ATPase, AAA+ type, core YP_004541290.1 KEGG: kra:Krad_3124 hypothetical protein YP_004541291.1 PFAM: peptidase A24A, prepilin type IV; KEGG: xce:Xcel_0501 peptidase A24A prepilin type IV YP_004541292.1 KEGG: xce:Xcel_0502 ferredoxin--NADP(+) reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004541293.1 KEGG: xce:Xcel_0503 peptidase M48 Ste24p; HAMAP: protease htpX; PFAM: peptidase M48, Ste24p YP_004541294.1 KEGG: pjd:Pjdr2_5542 lipolytic protein G-D-S-L family YP_004541295.1 KEGG: xce:Xcel_0505 Cof-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_004541296.1 KEGG: xce:Xcel_0508 hypothetical protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520 YP_004541297.1 KEGG: ske:Sked_07630 RarD protein; TIGRFAM: RarD protein; PFAM: Protein of unknown function DUF6, transmembrane YP_004541298.1 TIGRFAM: ribosomal protein L33; HAMAP: ribosomal protein L33; KEGG: xce:Xcel_0598 50S ribosomal protein L33; PFAM: ribosomal protein L33 YP_004541299.1 HAMAP: UPF0336 protein; KEGG: ske:Sked_07680 hypothetical protein YP_004541300.1 PFAM: MaoC-like dehydratase; KEGG: cfl:Cfla_2692 MaoC domain protein dehydratase YP_004541301.1 KEGG: cfl:Cfla_0057 hypothetical protein YP_004541302.1 TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: xce:Xcel_1454 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC YP_004541303.1 KEGG: xce:Xcel_1803 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase YP_004541304.1 KEGG: xce:Xcel_1802 L-lysine 6-monooxygenase (NADPH) YP_004541305.1 PFAM: IucA/IucC; Siderophore biosynthesis protein, conserved region; KEGG: xce:Xcel_1801 IucA/IucC family protein YP_004541306.1 PFAM: peptidase S45, penicillin amidase; KEGG: xce:Xcel_1800 penicillin amidase YP_004541307.1 PFAM: Siderophore biosynthesis protein, conserved region; KEGG: xce:Xcel_1799 hypothetical protein YP_004541308.1 KEGG: xce:Xcel_0601 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004541309.1 KEGG: xce:Xcel_0602 major facilitator superfamily protein; manually curated; PFAM: Major facilitator superfamily MFS-1 YP_004541310.1 KEGG: xce:Xcel_0603 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal YP_004541311.1 PFAM: YkuD domain; peptidoglycan binding-like; KEGG: xce:Xcel_0604 ErfK/YbiS/YcfS/YnhG family protein YP_004541312.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: sma:SAV_1438 hypothetical protein YP_004541313.1 KEGG: bcv:Bcav_0102 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004541314.1 KEGG: bcv:Bcav_0103 histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004541315.1 PFAM: Protein of unknown function DUF1006; KEGG: sna:Snas_2789 hypothetical protein YP_004541316.1 PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; HAMAP: adenosine deaminase; KEGG: xce:Xcel_0605 adenosine deaminase YP_004541317.1 KEGG: xce:Xcel_0606 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004541318.1 KEGG: xce:Xcel_0607 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like YP_004541319.1 PFAM: ABC-2 type transporter; KEGG: cfl:Cfla_2681 ABC-2 type transporter YP_004541320.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0609 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004541321.1 KEGG: xce:Xcel_0610 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein YP_004541322.1 TIGRFAM: transcription antitermination protein, NusG; PFAM: transcription antitermination protein, NusG, N-terminal; KEGG: xce:Xcel_0611 NusG antitermination factor; SMART: transcription antitermination protein, NusG, N-terminal YP_004541323.1 TIGRFAM: ribosomal protein L11, bacterial-type; PFAM: ribosomal protein L11, C-terminal; ribosomal protein L11, N-terminal; KEGG: jde:Jden_0576 ribosomal protein L11; SMART: ribosomal protein L11 YP_004541324.1 KEGG: cfl:Cfla_2675 ribosomal protein L1; TIGRFAM: ribosomal protein L1, bacterial-type; PFAM: ribosomal protein L1 YP_004541325.1 KEGG: xce:Xcel_0614 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_004541326.1 KEGG: xce:Xcel_0615 hypothetical protein YP_004541327.1 KEGG: xce:Xcel_0616 hypothetical protein YP_004541328.1 KEGG: xce:Xcel_0617 tetratricopeptide repeat-containing protein YP_004541329.1 KEGG: xce:Xcel_0618 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: ribosomal protein L10 YP_004541330.1 TIGRFAM: ribosomal protein L7/L12; HAMAP: ribosomal protein L7/L12; KEGG: gob:Gobs_4520 50S ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12, C-terminal YP_004541331.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: xce:Xcel_0620 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7 YP_004541332.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: xce:Xcel_0621 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5 YP_004541333.1 KEGG: xce:Xcel_0622 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial-type; PFAM: ribosomal protein S12/S23 YP_004541334.1 KEGG: xce:Xcel_0623 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7, bacterial-type; PFAM: ribosomal protein S7 YP_004541335.1 KEGG: cfl:Cfla_2662 translation elongation factor G; TIGRFAM: translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; translation elongation factor EFTu/EF1A, domain 2; translation elongation factor EFG/EF2, domain IV; translation elongation factor EFG/EF2, C-terminal YP_004541336.1 TIGRFAM: translation elongation factor EFTu/EF1A, bacterial/organelle; KEGG: xce:Xcel_0625 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; translation elongation factor EFTu/EF1A, domain 2; translation elongation factor EFTu/EF1A, C-terminal YP_004541337.1 TIGRFAM: ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: xce:Xcel_0626 30S ribosomal protein S10; PFAM: ribosomal protein S10 YP_004541338.1 KEGG: xce:Xcel_0627 50S ribosomal protein L3; TIGRFAM: ribosomal protein L3, bacterial/organelle-type; PFAM: ribosomal protein L3 YP_004541339.1 PFAM: ribosomal protein L4/L1e; KEGG: xce:Xcel_0628 50S ribosomal protein L4/L1e YP_004541340.1 PFAM: ribosomal protein L25/L23; KEGG: xce:Xcel_0629 50S ribosomal protein L25/L23 YP_004541341.1 KEGG: xce:Xcel_0630 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2, bacterial-type; PFAM: ribosomal protein L2 YP_004541342.1 KEGG: ske:Sked_29700 30S ribosomal protein S19P; TIGRFAM: ribosomal protein S19, bacterial-type; PFAM: ribosomal protein S19/S15 YP_004541343.1 KEGG: xce:Xcel_0632 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22, bacterial-type; PFAM: ribosomal protein L22/L17 YP_004541344.1 TIGRFAM: ribosomal protein S3, bacterial; PFAM: ribosomal protein S3, C-terminal; K Homology, type 2; ribosomal protein S3, N-terminal; KEGG: xce:Xcel_0633 30S ribosomal protein S3; SMART: K Homology YP_004541345.1 TIGRFAM: ribosomal protein L16; HAMAP: ribosomal protein L16; KEGG: ske:Sked_29670 50S ribosomal protein L16P; PFAM: ribosomal protein L10e/L16 YP_004541346.1 KEGG: xce:Xcel_0635 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004541347.1 KEGG: xce:Xcel_0636 30S ribosomal protein S17; TIGRFAM: ribosomal protein S17, bacterial-type; PFAM: ribosomal protein S17 YP_004541348.1 KEGG: jde:Jden_0597 ribosomal protein L14; TIGRFAM: ribosomal protein L14, bacterial-type; PFAM: ribosomal protein L14b/L23e YP_004541349.1 TIGRFAM: ribosomal protein L24; PFAM: KOW; KEGG: xce:Xcel_0638 50S ribosomal protein L24; SMART: KOW YP_004541350.1 PFAM: ribosomal protein L5; KEGG: xce:Xcel_0639 50S ribosomal protein L5 YP_004541351.1 PFAM: ribosomal protein S14; KEGG: xce:Xcel_0640 30S ribosomal protein S14 YP_004541352.1 PFAM: ribosomal protein S8; KEGG: cfl:Cfla_2645 ribosomal protein S8 YP_004541353.1 KEGG: xce:Xcel_0642 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial-type; PFAM: ribosomal protein L6, alpha-beta domain YP_004541354.1 KEGG: ske:Sked_29580 50S ribosomal protein L18P; TIGRFAM: ribosomal protein L18, bacterial; PFAM: ribosomal protein L18/L5 YP_004541355.1 KEGG: xce:Xcel_0644 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5, bacterial-type; PFAM: ribosomal protein S5, N-terminal; ribosomal protein S5, C-terminal YP_004541356.1 KEGG: ske:Sked_29560 50S ribosomal protein L30P; TIGRFAM: ribosomal protein L30, bacterial-type; PFAM: ribosomal protein L30p/L7e, conserved region YP_004541357.1 KEGG: xce:Xcel_0646 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15, bacterial-type; PFAM: ribosomal protein L15 YP_004541358.1 KEGG: xce:Xcel_0647 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein YP_004541359.1 TIGRFAM: adenylate kinase, subfamily; HAMAP: adenylate kinase; KEGG: xce:Xcel_0648 adenylate kinase; PFAM: adenylate kinase YP_004541360.1 TIGRFAM: peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: xce:Xcel_0649 methionine aminopeptidase; PFAM: peptidase M24, structural domain YP_004541361.1 KEGG: xce:Xcel_0650 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1, IF1 type YP_004541362.1 TIGRFAM: ribosomal protein L36; HAMAP: ribosomal protein L36; KEGG: cai:Caci_0960 50S ribosomal protein L36; PFAM: ribosomal protein L36 YP_004541363.1 KEGG: ske:Sked_29480 30S ribosomal protein S13P; TIGRFAM: ribosomal protein S13, bacterial-type; PFAM: ribosomal protein S13 YP_004541364.1 KEGG: xce:Xcel_0653 30S ribosomal protein S11; TIGRFAM: ribosomal protein S11, bacterial-type; PFAM: ribosomal protein S11 YP_004541365.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: xce:Xcel_0654 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal YP_004541366.1 TIGRFAM: ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: xce:Xcel_0655 50S ribosomal protein L17; PFAM: ribosomal protein L17 YP_004541367.1 KEGG: xce:Xcel_0656 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein YP_004541368.1 PFAM: ROK; KEGG: xce:Xcel_0657 ROK family protein YP_004541369.1 PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: xce:Xcel_0658 tRNA pseudouridine synthase A YP_004541370.1 KEGG: xce:Xcel_0659 hypothetical protein YP_004541371.1 KEGG: xce:Xcel_0661 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial-type; PFAM: ribosomal protein L13 YP_004541372.1 PFAM: ribosomal protein S9; KEGG: xce:Xcel_0662 30S ribosomal protein S9 YP_004541373.1 TIGRFAM: phosphoglucosamine mutase; KEGG: xce:Xcel_0663 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004541374.1 HAMAP: Formylmethionine deformylase; KEGG: xce:Xcel_0664 peptide deformylase; PFAM: Formylmethionine deformylase YP_004541375.1 KEGG: xce:Xcel_0665 SNARE associated Golgi protein-like protein YP_004541376.1 PFAM: phosphoribulokinase/uridine kinase; TIGRFAM: Bacterial pantothenate kinase; HAMAP: Pantothenate kinase; KEGG: xce:Xcel_0666 pantothenate kinase YP_004541377.1 PFAM: Protein of unknown function DUF72; KEGG: kra:Krad_3388 hypothetical protein YP_004541378.1 PFAM: Sugar isomerase (SIS); glutamine amidotransferase, class-II; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: xce:Xcel_0667 glucosamine/fructose-6-phosphate aminotransferase, isomerizing YP_004541379.1 KEGG: kfl:Kfla_2659 hypothetical protein YP_004541380.1 TIGRFAM: phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: xce:Xcel_0668 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase YP_004541381.1 KEGG: xce:Xcel_0669 luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup YP_004541382.1 KEGG: xce:Xcel_0670 YjeF-family domain-containing protein; TIGRFAM: YjeF-related protein, N-terminal; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related YP_004541383.1 KEGG: sna:Snas_4979 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004541384.1 KEGG: xce:Xcel_0671 glutathione peroxidase; PFAM: glutathione peroxidase YP_004541385.1 PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: xce:Xcel_0672 pseudouridine synthase YP_004541386.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: xce:Xcel_0673 alanine racemase YP_004541387.1 KEGG: xce:Xcel_0674 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria YP_004541388.1 KEGG: xce:Xcel_0675 peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: peptidase M22, glycoprotease YP_004541389.1 KEGG: xce:Xcel_0676 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004541390.1 PFAM: Rhodanese-like; KEGG: xce:Xcel_0677 rhodanese domain-containing protein; SMART: Rhodanese-like YP_004541391.1 PFAM: Nitroreductase-like; KEGG: xce:Xcel_0678 nitroreductase YP_004541392.1 PFAM: peptidase M22, glycoprotease; TIGRFAM: glycoprotease GCP; peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: xce:Xcel_0679 metalloendopeptidase, glycoprotease family YP_004541393.1 TIGRFAM: carboxylate-amine ligase, predicted; HAMAP: carboxylate-amine ligase ybdK; KEGG: xce:Xcel_0681 glutamate--cysteine ligase GCS2; PFAM: glutamate--cysteine ligase, GCS2 YP_004541394.1 KEGG: xce:Xcel_0682 hypothetical protein YP_004541395.1 KEGG: xce:Xcel_0684 chaperonin Cpn10; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10 YP_004541396.1 PFAM: transcription factor WhiB; KEGG: xce:Xcel_0685 transcription factor WhiB YP_004541397.1 KEGG: xce:Xcel_0686 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004541398.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: bcv:Bcav_3055 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core YP_004541399.1 KEGG: xce:Xcel_0068 amine oxidase; PFAM: Amine oxidase YP_004541400.1 PFAM: Endoribonuclease L-PSP; KEGG: xce:Xcel_0067 endoribonuclease L-PSP YP_004541401.1 KEGG: xce:Xcel_0688 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease YP_004541402.1 KEGG: xce:Xcel_0689 IMP dehydrogenase family protein; TIGRFAM: IMP dehydrogenase related 2; PFAM: IMP dehydrogenase/GMP reductase YP_004541403.1 KEGG: xce:Xcel_0690 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004541404.1 KEGG: xce:Xcel_0691 hypothetical protein YP_004541405.1 KEGG: sna:Snas_5298 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004541406.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase; KEGG: cfl:Cfla_0786 carbohydrate kinase, thermoresistant glucokinase family; PFAM: Shikimate kinase YP_004541407.1 KEGG: cfl:Cfla_0785 gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter YP_004541408.1 PFAM: acetate/butyrate kinase; TIGRFAM: acetate kinase; HAMAP: acetate kinase; KEGG: bcv:Bcav_3049 acetate kinase YP_004541409.1 TIGRFAM: phosphate acetyltransferase; KEGG: xce:Xcel_0693 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG YP_004541410.1 HAMAP: phosphoketolase; KEGG: cfl:Cfla_2576 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal YP_004541411.1 KEGG: xce:Xcel_0695 hypothetical protein YP_004541412.1 PFAM: Thiamine monophosphate synthase; TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: xce:Xcel_1455 thiamine-phosphate pyrophosphorylase YP_004541413.1 manually curated; TIGRFAM: glycine oxidase ThiO; KEGG: xce:Xcel_1456 glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase YP_004541414.1 KEGG: xce:Xcel_1457 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS YP_004541415.1 KEGG: xce:Xcel_1458 thiazole biosynthesis family protein; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis YP_004541416.1 KEGG: xce:Xcel_1459 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SMART: Rhodanese-like YP_004541417.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: ske:Sked_28430 multidrug ABC transporter ATPase/permease; SMART: ATPase, AAA+ type, core YP_004541418.1 KEGG: cfl:Cfla_2573 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region YP_004541419.1 KEGG: ske:Sked_28410 hypothetical protein YP_004541420.1 PFAM: GMP synthase, C-terminal; glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: bcv:Bcav_3038 GMP synthase, large subunit YP_004541422.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: kfl:Kfla_3058 TetR family transcriptional regulator YP_004541423.1 PFAM: glycosyl transferase, group 1; KEGG: bcv:Bcav_3037 glycosyl transferase group 1 YP_004541424.1 KEGG: xce:Xcel_0707 hypothetical protein YP_004541425.1 PFAM: PspC; KEGG: bcv:Bcav_3035 phage shock protein C, PspC YP_004541426.1 PFAM: ATP-binding region, ATPase-like; PspC; KEGG: xce:Xcel_0709 signal transduction histidine kinase YP_004541427.1 KEGG: xce:Xcel_0710 LuxR family two component transcriptional regulator; PFAM: transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004541428.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: xce:Xcel_1812 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004541429.1 KEGG: apn:Asphe3_29370 uroporphyrinogen-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; PFAM: Tetrapyrrole methylase YP_004541430.1 TIGRFAM: phosphoadenosine phosphosulphate reductase CysH-type; KEGG: xce:Xcel_0717 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulphate reductase YP_004541431.1 KEGG: xce:Xcel_0718 sulfite reductase (ferredoxin); PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like YP_004541432.1 KEGG: xce:Xcel_0721 hypothetical protein YP_004541433.1 PFAM: Protein of unknown function DUF456; KEGG: xce:Xcel_0722 hypothetical protein YP_004541434.1 KEGG: cmi:CMM_1679 hypothetical protein YP_004541435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nca:Noca_0429 GCN5-related N-acetyltransferase YP_004541436.1 manually curated; PFAM: HTH transcriptional regulator, MerR; KEGG: sro:Sros_8866 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR YP_004541437.1 KEGG: xce:Xcel_0723 ATP-dependent DNA helicase PcrA; TIGRFAM: DNA helicase, ATP-dependent, PcrA type; PFAM: DNA helicase, UvrD/REP type YP_004541438.1 KEGG: nfa:nfa2970 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related YP_004541439.1 PFAM: Clp, N-terminal; KEGG: xce:Xcel_0725 Clp domain-containing protein YP_004541440.1 KEGG: xce:Xcel_0726 hypothetical protein YP_004541441.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: succinyl-CoA synthetase, beta subunit; HAMAP: succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: ske:Sked_28160 succinyl-CoA synthetase (ADP-forming) subunit beta YP_004541442.1 TIGRFAM: succinyl-CoA ligase, alpha subunit; KEGG: ske:Sked_28150 succinyl-CoA synthetase (ADP-forming) subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase YP_004541443.1 KEGG: xce:Xcel_0736 PE-PGRS family protein YP_004541444.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; KEGG: xce:Xcel_0737 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal YP_004541445.1 manually curated; KEGG: nca:Noca_4322 major facilitator transporter YP_004541446.1 KEGG: xce:Xcel_0738 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region YP_004541447.1 KEGG: xce:Xcel_0739 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004541448.1 KEGG: xce:Xcel_0740 hypothetical protein YP_004541449.1 KEGG: scb:SCAB_31701 hypothetical protein YP_004541450.1 PFAM: Major intrinsic protein; KEGG: xce:Xcel_0741 major intrinsic protein YP_004541451.1 TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: ske:Sked_28070 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004541452.1 SMART: ATPase, AAA+ type, core; manually curated; KEGG: bcv:Bcav_1525 ABC transporter related; PFAM: ABC transporter-like YP_004541453.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; Alpha-amylase, C-terminal all beta; TIGRFAM: Alpha-1,6-glucosidases, pullulanase-type; KEGG: xce:Xcel_0747 pullulanase-type alpha-1,6-glucosidase; PFAM: glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; glycoside hydrolase, family 13, N-terminal YP_004541454.1 KEGG: bbt:BBta_5249 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004541455.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: art:Arth_0740 hypothetical protein YP_004541456.1 KEGG: bcv:Bcav_2998 sugar ABC transporter YP_004541457.1 PFAM: ABC transporter-like; KEGG: cfl:Cfla_2514 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004541458.1 PFAM: Bacterial inner-membrane translocator; KEGG: cfl:Cfla_2513 inner-membrane translocator YP_004541459.1 KEGG: cfl:Cfla_2512 ROK family protein; PFAM: ROK; HTH transcriptional regulator, MarR YP_004541460.1 PFAM: ABC transporter-like; KEGG: cfl:Cfla_2511 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004541461.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: xce:Xcel_0748 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT YP_004541462.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_0749 GCN5-related N-acetyltransferase YP_004541463.1 KEGG: xce:Xcel_0400 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004541464.1 PFAM: carbohydrate kinase, FGGY, N-terminal; KEGG: cfl:Cfla_2755 carbohydrate kinase, FGGY-like protein YP_004541465.1 KEGG: bcv:Bcav_3273 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal YP_004541466.1 HAMAP: L-arabinose isomerase; KEGG: xce:Xcel_0403 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_004541467.1 PFAM: Bacterial Ig-related; KEGG: sro:Sros_2448 hypothetical protein YP_004541468.1 PFAM: Protein of unknown function DUF1680; KEGG: mts:MTES_1445 hypothetical protein YP_004541469.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mau:Micau_3820 binding-protein-dependent transport systems inner membrane component YP_004541470.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mil:ML5_4595 binding-protein-dependent transport systems inner membrane component YP_004541471.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mts:MTES_1442 sugar ABC transporter periplasmic protein YP_004541472.1 KEGG: mts:MTES_1439 transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541473.1 PFAM: HTH transcriptional regulator, LacI; KEGG: xce:Xcel_3445 hypothetical protein YP_004541474.1 KEGG: ske:Sked_05510 alpha-L-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal YP_004541475.1 PFAM: Protein of unknown function DUF1680; KEGG: amd:AMED_3410 hypothetical protein YP_004541476.1 KEGG: ske:Sked_07020 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004541477.1 PFAM: Protein of unknown function DUF624; KEGG: jde:Jden_0509 protein of unknown function DUF624 YP_004541478.1 PFAM: glycoside hydrolase, family 43; KEGG: jde:Jden_0510 glycoside hydrolase family 43 YP_004541479.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0511 binding-protein-dependent transport systems inner membrane component YP_004541480.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0512 binding-protein-dependent transport systems inner membrane component YP_004541481.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: jde:Jden_0513 extracellular solute-binding protein family 1 YP_004541482.1 KEGG: bcv:Bcav_0053 alpha-galactosidase YP_004541483.1 KEGG: jde:Jden_0516 arabinan endo-1,5-alpha-L-arabinosidase; PFAM: glycoside hydrolase, family 43 YP_004541484.1 KEGG: xce:Xcel_0754 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase YP_004541485.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: xce:Xcel_0755 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004541486.1 PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: xce:Xcel_0756 3-demethylubiquinone-9 3-methyltransferase YP_004541487.1 KEGG: xce:Xcel_0757 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004541488.1 PFAM: Na/Pi-cotransporter; KEGG: amr:AM1_5305 NptA protein YP_004541490.1 TIGRFAM: Galactokinase; KEGG: xce:Xcel_0758 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal YP_004541491.1 PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: xce:Xcel_0763 hypothetical protein YP_004541492.1 PFAM: Protein of unknown function DUF1003; KEGG: xce:Xcel_0765 hypothetical protein YP_004541493.1 PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; KEGG: xce:Xcel_0766 MgtE intracellular region YP_004541494.1 KEGG: xce:Xcel_0767 hypothetical protein YP_004541495.1 TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: cfl:Cfla_2428 exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit YP_004541496.1 TIGRFAM: Exodeoxyribonuclease V, beta subunit; KEGG: cfl:Cfla_2429 exodeoxyribonuclease V; PFAM: DNA helicase, UvrD/REP type YP_004541497.1 TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: cfl:Cfla_2430 exodeoxyribonuclease V, alpha subunit; PFAM: RNA helicase 1, viral YP_004541498.1 PFAM: peptidase M24, structural domain; peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: xce:Xcel_0769 peptidase M24 YP_004541499.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_0770 alpha/beta hydrolase fold protein YP_004541500.1 KEGG: xce:Xcel_0771 PHP domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal YP_004541501.1 KEGG: xce:Xcel_0772 multiple antibiotic resistance (MarC)-like protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_004541502.1 PFAM: Protein of unknown function DUF1905; KEGG: xce:Xcel_0773 hypothetical protein YP_004541503.1 KEGG: xce:Xcel_0774 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541504.1 KEGG: xce:Xcel_0775 hypothetical protein YP_004541505.1 KEGG: ske:Sked_27680 hypothetical protein YP_004541506.1 PFAM: DNA helicase, UvrD/REP type; KEGG: xce:Xcel_0779 UvrD/REP helicase YP_004541507.1 PFAM: DNA helicase, UvrD/REP type; KEGG: xce:Xcel_0780 UvrD/REP helicase YP_004541508.1 PFAM: Aminoglycoside phosphotransferase; KEGG: xce:Xcel_0783 aminoglycoside phosphotransferase YP_004541509.1 PFAM: NUDIX hydrolase domain; Zinc ribbon, NADH pyrophosphatase; NADH pyrophosphatase-like, N-terminal; KEGG: xce:Xcel_0784 NUDIX hydrolase YP_004541510.1 KEGG: ske:Sked_27570 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein GlrX; PFAM: glutaredoxin YP_004541511.1 KEGG: xce:Xcel_0786 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; Helicase/RNase D C-terminal, HRDC domain; SMART: Helicase/RNase D C-terminal, HRDC domain YP_004541513.1 PFAM: transcription factor WhiB; AT hook, DNA-binding motif; KEGG: xce:Xcel_0788 transcription factor WhiB YP_004541514.1 KEGG: xce:Xcel_0789 UBA/ThiF-type NAD/FAD binding protein YP_004541515.1 KEGG: xce:Xcel_0790 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF45 YP_004541516.1 KEGG: xce:Xcel_0791 hypothetical protein; TIGRFAM: Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342 YP_004541517.1 KEGG: xce:Xcel_0792 peptidase S16 lon domain-containing protein YP_004541518.1 KEGG: xce:Xcel_0793 hypothetical protein; HAMAP: Uncharacterised protein family UPF0182; PFAM: Uncharacterised protein family UPF0182 YP_004541519.1 PFAM: Protein of unknown function DUF1080; KEGG: sen:SACE_2994 glycosyl hydrolase YP_004541520.1 KEGG: mil:ML5_5623 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004541521.1 PFAM: Domain of unknown function DUF1918; Protein of unknown function DUF1876; KEGG: xce:Xcel_0903 hypothetical protein YP_004541522.1 KEGG: ami:Amir_6884 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3 YP_004541523.1 KEGG: kfl:Kfla_5002 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004541524.1 PFAM: ABC transporter-like; KEGG: ami:Amir_6886 ABC transporter; SMART: ATPase, AAA+ type, core YP_004541525.1 KEGG: ske:Sked_25620 CheY-like receiver domain/HTH DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004541526.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: ske:Sked_25610 histidine kinase YP_004541527.1 KEGG: ica:Intca_0965 hypothetical protein YP_004541528.1 PFAM: Protein of unknown function DUF2235; KEGG: nfa:nfa18130 hypothetical protein YP_004541529.1 KEGG: svi:Svir_18710 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter YP_004541530.1 PFAM: ABC transporter-like; KEGG: rha:RHA1_ro02602 ABC transporter, ATP-binding component YP_004541531.1 PFAM: UspA; KEGG: xce:Xcel_0905 UspA domain-containing protein YP_004541532.1 KEGG: cfl:Cfla_0372 Na+/Ca+ antiporter, CaCA family; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region YP_004541533.1 PFAM: Fe-S metabolism associated SufE; KEGG: xce:Xcel_0911 Fe-S metabolism associated SufE YP_004541534.1 PFAM: Rhodanese-like; KEGG: xce:Xcel_0912 rhodanese domain-containing protein; SMART: Rhodanese-like YP_004541535.1 PFAM: GAF; Signal transduction response regulator, C-terminal; KEGG: cfl:Cfla_0169 phytochrome sensor protein YP_004541536.1 PFAM: Aldehyde dehydrogenase; KEGG: xce:Xcel_0913 aldehyde dehydrogenase YP_004541537.1 PFAM: Protein of unknown function DUF779; KEGG: xce:Xcel_0914 hypothetical protein YP_004541538.1 KEGG: xce:Xcel_0915 hypothetical protein YP_004541539.1 KEGG: aai:AARI_12980 hypothetical protein YP_004541540.1 KEGG: xce:Xcel_1807 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004541541.1 KEGG: psa:PST_1480 helicase, PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541542.1 KEGG: pap:PSPA7_6040 hypothetical protein YP_004541543.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: psa:PST_1474 chemotaxis protein MotB-related protein YP_004541544.1 KEGG: vcj:VCD_002606 hypothetical protein YP_004541545.1 KEGG: cmi:CMM_0491 hypothetical protein YP_004541546.1 KEGG: aai:AARI_15500 hypothetical protein YP_004541547.1 KEGG: bcv:Bcav_3917 hypothetical protein YP_004541548.1 KEGG: bcv:Bcav_3918 hypothetical protein YP_004541549.1 KEGG: bcv:Bcav_3916 hypothetical protein YP_004541550.1 KEGG: bcv:Bcav_3915 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific YP_004541551.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: cdi:DIP2313 type I restriction/modification system DNA specificity protein YP_004541552.1 KEGG: ami:Amir_1452 hypothetical protein YP_004541553.1 KEGG: mil:ML5_0713 hypothetical protein YP_004541554.1 KEGG: gob:Gobs_3736 hypothetical protein YP_004541555.1 KEGG: rer:RER_56650 hypothetical protein YP_004541556.1 KEGG: rer:RER_56660 hypothetical protein YP_004541558.1 KEGG: xce:Xcel_2129 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; BRCT; SMART: Exonuclease YP_004541559.1 TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: bcv:Bcav_3906 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal YP_004541560.1 KEGG: rha:RHA1_ro07268 hypothetical protein; manually curated; PFAM: Filamentation induced by cAMP/death on curing, related YP_004541561.1 KEGG: kfl:Kfla_2966 hypothetical protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat YP_004541562.1 KEGG: xce:Xcel_0921 hypothetical protein YP_004541563.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase, family 28; KEGG: cwo:Cwoe_2711 glycosyltransferase, MGT family YP_004541564.1 TIGRFAM: Malate synthase A; KEGG: xce:Xcel_0922 malate synthase A; PFAM: Malate synthase-like, core YP_004541565.1 TIGRFAM: Isocitrate lyase; KEGG: mts:MTES_2434 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase YP_004541566.1 KEGG: xce:Xcel_0924 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004541570.1 KEGG: apn:Asphe3_28310 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004541571.1 TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: mts:MTES_3188 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; PFAM: Coenzyme A transferase YP_004541572.1 TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: mts:MTES_3187 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase YP_004541573.1 PFAM: Short chain fatty acid transporter; KEGG: krh:KRH_02390 short chain fatty acid transporter YP_004541574.1 KEGG: rop:ROP_48680 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004541575.1 PFAM: General substrate transporter; KEGG: aau:AAur_0391 major facilitator transporter YP_004541576.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ach:Achl_0576 transcriptional regulator, LysR family YP_004541577.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: xce:Xcel_0925 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_004541578.1 PFAM: Protein of unknown function DUF1697; KEGG: nda:Ndas_2992 hypothetical protein YP_004541579.1 KEGG: xce:Xcel_0927 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc YP_004541580.1 KEGG: bcv:Bcav_4109 LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor; PFAM: Gram-positive anchor YP_004541581.1 HAMAP: Fumarate hydratase class II; KEGG: xce:Xcel_0935 fumarate lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal YP_004541582.1 PFAM: carbonic anhydrase; KEGG: xce:Xcel_0936 carbonic anhydrase YP_004541583.1 KEGG: ske:Sked_26450 sugar kinase, ribokinase; PFAM: carbohydrate/purine kinase YP_004541584.1 TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: xce:Xcel_0937 exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit YP_004541585.1 KEGG: scb:SCAB_17261 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004541586.1 TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: ske:Sked_26430 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_004541587.1 PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: xce:Xcel_0941 hydroxymethylbutenyl pyrophosphate reductase YP_004541588.1 PFAM: RmuC; KEGG: xce:Xcel_0942 hypothetical protein YP_004541589.1 KEGG: xce:Xcel_0943 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004541590.1 KEGG: xce:Xcel_0944 hypothetical protein YP_004541591.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cfl:Cfla_0724 GCN5-related N-acetyltransferase YP_004541592.1 PFAM: Pentapeptide repeat; KEGG: xce:Xcel_0945 pentapeptide repeat-containing protein YP_004541593.1 KEGG: xce:Xcel_0946 GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related YP_004541594.1 KEGG: cmi:CMM_0281 acetyltransferase YP_004541595.1 PFAM: Methyltransferase type 11; KEGG: dra:DR_2274 hypothetical protein YP_004541596.1 PFAM: Nucleotidyltransferase; KEGG: eum:ECUMN_4816 aminoglycoside resistance protein YP_004541597.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ske:Sked_26210 extracellular solute-binding protein, family 5 YP_004541598.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0786 binding-protein-dependent transport systems inner membrane component YP_004541599.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_26190 dipeptide/oligopeptide/nickel ABC transporter permease YP_004541600.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: ske:Sked_26180 ABC transporter ATPase; SMART: ATPase, AAA+ type, core YP_004541601.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: bcv:Bcav_1558 protein of unknown function DUF214 YP_004541602.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: bcv:Bcav_1557 protein of unknown function DUF214 YP_004541603.1 PFAM: ABC transporter-like; KEGG: bcv:Bcav_1556 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004541604.1 PFAM: ABC transporter-like; KEGG: bcv:Bcav_1555 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004541605.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: cef:CE1884 peptide ABC transporter peptide-binding protein YP_004541606.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cef:CE1885 peptide ABC transporter permease protein YP_004541607.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: car:cauri_0213 iron ABC transport system, permease protein YP_004541608.1 KEGG: cgb:cg2184 peptide ABC transporter ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core YP_004541609.1 KEGG: svi:Svir_01010 choline/carnitine/betaine transport; TIGRFAM: BCCT transporter; PFAM: BCCT transporter YP_004541610.1 KEGG: xce:Xcel_0962 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; translation elongation factor EFTu/EF1A, domain 2; translation elongation factor EFG/EF2, C-terminal YP_004541611.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: xce:Xcel_0963 LmbE family protein YP_004541612.1 KEGG: xce:Xcel_0964 hypothetical protein YP_004541613.1 PFAM: VanW; KEGG: xce:Xcel_0965 VanW family protein YP_004541614.1 KEGG: xce:Xcel_0966 hypothetical protein YP_004541615.1 KEGG: xce:Xcel_0967 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT YP_004541616.1 KEGG: xce:Xcel_0968 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_004541617.1 KEGG: xce:Xcel_0969 hypothetical protein YP_004541618.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: xce:Xcel_0970 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004541619.1 TIGRFAM: succinyldiaminopimelate transaminase, actinobacteria; KEGG: xce:Xcel_0971 class I and II aminotransferase; PFAM: Aminotransferase, class I/II YP_004541620.1 TIGRFAM: Citrate synthase, type II; KEGG: xce:Xcel_0972 citrate synthase I; PFAM: Citrate synthase-like YP_004541621.1 KEGG: xce:Xcel_0974 hypothetical protein YP_004541622.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: ske:Sked_25970 tetrahydrodipicolinate N-succinyltransferase YP_004541623.1 TIGRFAM: succinyl-diaminopimelate desuccinylase; KEGG: xce:Xcel_0976 succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase M20, dimerisation YP_004541625.1 KEGG: xce:Xcel_0977 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730 YP_004541626.1 TIGRFAM: dihydropteroate synthase; KEGG: xce:Xcel_0978 dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_004541627.1 KEGG: xce:Xcel_0979 hypothetical protein YP_004541628.1 PFAM: Methyltransferase type 11; KEGG: cfl:Cfla_1005 O-methyltransferase family 3 YP_004541629.1 KEGG: xce:Xcel_0981 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004541630.1 KEGG: xce:Xcel_0982 hypothetical protein YP_004541631.1 KEGG: ske:Sked_25880 trypsin-like serine protease with C-terminal PDZ domain; PFAM: peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_004541632.1 KEGG: xce:Xcel_0983 sec-independent translocation protein MttA/Hcf106 YP_004541633.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: xce:Xcel_0984 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_004541634.1 PFAM: phosphoesterase, HXTX; KEGG: xce:Xcel_0985 phosphoesterase HXTX YP_004541635.1 PFAM: ribonuclease BN-related; KEGG: xce:Xcel_0986 ribonuclease BN YP_004541636.1 TIGRFAM: succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: ske:Sked_25830 succinate dehydrogenase subunit B; PFAM: Ferredoxin YP_004541637.1 TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: xce:Xcel_0988 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004541638.1 KEGG: xce:Xcel_0989 succinate dehydrogenase hydrophobic anchor subunit-like protein YP_004541639.1 KEGG: ske:Sked_25800 succinate dehydrogenase subunit C; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase, cytochrome b subunit YP_004541640.1 KEGG: xce:Xcel_0992 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal YP_004541641.1 TIGRFAM: peptidase M20D, amidohydrolase; KEGG: xce:Xcel_0993 amidohydrolase; PFAM: peptidase M20; peptidase M20, dimerisation YP_004541642.1 PFAM: Basic membrane lipoprotein; KEGG: cfl:Cfla_1020 basic membrane lipoprotein YP_004541643.1 PFAM: ABC transporter-like; KEGG: cfl:Cfla_1021 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004541644.1 PFAM: Bacterial inner-membrane translocator; KEGG: cfl:Cfla_1022 inner-membrane translocator YP_004541645.1 PFAM: Bacterial inner-membrane translocator; KEGG: cfl:Cfla_1023 inner-membrane translocator YP_004541646.1 KEGG: bcv:Bcav_2943 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding YP_004541647.1 TIGRFAM: Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; KEGG: cfl:Cfla_1025 pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase, C-terminal; glycosyl transferase, family 3; glycosyl transferase, family 3, N-terminal YP_004541648.1 KEGG: ske:Sked_25680 hypothetical protein YP_004541649.1 KEGG: cfl:Cfla_1026 hypothetical protein YP_004541650.1 PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; HAMAP: adenosine deaminase; KEGG: xce:Xcel_1002 adenosine deaminase YP_004541651.1 PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; KEGG: xce:Xcel_1003 deoxyribose-phosphate aldolase YP_004541652.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting; KEGG: sro:Sros_5976 iron transport/utilisation related protein YP_004541653.1 TIGRFAM: Conserved hypothetical protein CHP00725; KEGG: tbi:Tbis_1049 hypothetical protein YP_004541654.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal; KEGG: xce:Xcel_1005 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004541655.1 TIGRFAM: purine nucleotide phosphorylase; Inosine guanosine/xanthosine phosphorylase; KEGG: xce:Xcel_1006 purine nucleotide phosphorylase; PFAM: Nucleoside phosphorylase YP_004541656.1 KEGG: xce:Xcel_1007 pyridine nucleotide-disulphide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004541657.1 KEGG: rop:ROP_58670 hypothetical protein YP_004541658.1 PFAM: NUDIX hydrolase domain; KEGG: ske:Sked_25510 ADP-ribose pyrophosphatase YP_004541659.1 PFAM: carbamoyl phosphate synthetase, large subunit, ATP-binding; carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: xce:Xcel_1012 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004541660.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: xce:Xcel_1013 maf protein; PFAM: Maf-like protein YP_004541661.1 PFAM: Auxin efflux carrier; KEGG: xce:Xcel_1014 auxin efflux carrier YP_004541662.1 PFAM: Protein of unknown function DUF885, bacterial; KEGG: xce:Xcel_1015 hypothetical protein YP_004541663.1 KEGG: cfl:Cfla_0178 hypothetical protein YP_004541665.1 KEGG: xce:Xcel_1019 hypothetical protein YP_004541666.1 manually curated; KEGG: xce:Xcel_1020 hypothetical protein YP_004541667.1 KEGG: xce:Xcel_1021 carboxyl transferase; PFAM: carboxyl transferase YP_004541668.1 KEGG: xce:Xcel_1022 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal YP_004541669.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: xce:Xcel_1023 adenylate/guanylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_004541670.1 PFAM: Protein of unknown function DUF159; KEGG: cfl:Cfla_1044 protein of unknown function DUF159 YP_004541671.1 KEGG: ske:Sked_25390 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004541672.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cfl:Cfla_0485 glycerophosphoryl diester phosphodiesterase YP_004541673.1 KEGG: xce:Xcel_1025 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004541674.1 KEGG: kra:Krad_4012 LysR family transcriptional regulator; TIGRFAM: transcriptional regulator, ArgP; PFAM: HTH transcriptional regulator, LysR YP_004541675.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cai:Caci_5931 lysine exporter protein (LysE/YggA) YP_004541676.1 PFAM: Aminotransferase, class I/II; KEGG: xce:Xcel_1027 class I and II aminotransferase YP_004541677.1 PFAM: Type II secretion system protein E; KEGG: xce:Xcel_1033 type II secretion system protein E YP_004541678.1 PFAM: Type II secretion system F domain; KEGG: xce:Xcel_1032 type II secretion system protein YP_004541679.1 PFAM: Type II secretion system F domain; KEGG: xce:Xcel_1031 type II secretion system protein YP_004541680.1 KEGG: xce:Xcel_1030 hypothetical protein YP_004541681.1 PFAM: TadE-like; KEGG: xce:Xcel_1029 TadE family protein YP_004541682.1 KEGG: xce:Xcel_1028 TadE family protein YP_004541683.1 manually curated; KEGG: cfl:Cfla_1241 hypothetical protein YP_004541684.1 KEGG: req:REQ_01790 hypothetical protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat YP_004541685.1 TIGRFAM: peptide chain release factor 2; HAMAP: peptide chain release factor 2, bacterial; KEGG: xce:Xcel_1034 peptide chain release factor 2; PFAM: Class I peptide chain release factor; peptide chain release factor YP_004541686.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: xce:Xcel_1035 cell division ATP-binding protein FtsE; PFAM: ABC transporter-like YP_004541687.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: xce:Xcel_1036 cell division protein FtsX YP_004541688.1 PFAM: peptidase M23; KEGG: xce:Xcel_1037 peptidase M23 YP_004541689.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: xce:Xcel_1038 SsrA-binding protein; PFAM: SsrA-binding protein YP_004541690.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: xce:Xcel_2314 OsmC family protein YP_004541691.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: sen:SACE_4773 hypothetical protein YP_004541692.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: kfl:Kfla_1852 LysR family transcriptional regulator YP_004541693.1 KEGG: bha:BH3831 hypothetical protein; PFAM: peptidase M14, carboxypeptidase A; SMART: peptidase M14, carboxypeptidase A YP_004541694.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bts:Btus_0541 major facilitator superfamily MFS_1 YP_004541695.1 PFAM: Alanine racemase, N-terminal; KEGG: ske:Sked_08300 amino acid aldolase or racemase YP_004541696.1 KEGG: xce:Xcel_1043 hypothetical protein YP_004541697.1 PFAM: ROK; Bacterial extracellular solute-binding, family 1; KEGG: xce:Xcel_1044 ROK family protein YP_004541698.1 PFAM: Glucosamine/galactosamine-6-phosphate isomerase; TIGRFAM: Glucosamine-6-phosphate isomerase, subgroup; HAMAP: Glucosamine-6-phosphate deaminase; KEGG: xce:Xcel_1049 glucosamine-6-phosphate isomerase YP_004541699.1 KEGG: xce:Xcel_1050 hypothetical protein YP_004541700.1 KEGG: xce:Xcel_1051 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal YP_004541701.1 KEGG: xce:Xcel_1052 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase PFAM: Nicotinate phosphoribosyltransferase-like YP_004541702.1 KEGG: xce:Xcel_1056 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core YP_004541703.1 PFAM: Domain of unknown function DUF2017; KEGG: xce:Xcel_1057 hypothetical protein YP_004541704.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: kfl:Kfla_1534 alcohol dehydrogenase zinc-binding domain-containing protein YP_004541705.1 PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: glutamate racemase; HAMAP: glutamate racemase; KEGG: xce:Xcel_1058 glutamate racemase YP_004541706.1 KEGG: xce:Xcel_1059 metal-dependent hydrolase of the beta-lactamase superfamily III YP_004541707.1 KEGG: nda:Ndas_3912 transmembrane protein YP_004541708.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: xce:Xcel_1061 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_004541709.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: ribonuclease phosphorolytic, bacterial-type; HAMAP: ribonuclease phosphorolytic, bacterial-type; KEGG: xce:Xcel_1062 ribonuclease PH YP_004541710.1 KEGG: pth:PTH_0655 response regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region YP_004541711.1 KEGG: tmr:Tmar_0439 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; GAF; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004541712.1 PFAM: Sodium/solute symporter; KEGG: hmo:HM1_2663 na+/solute symporter YP_004541713.1 KEGG: hmo:HM1_2664 hypothetical protein YP_004541715.1 TIGRFAM: Probable solute:sodium symporter, small subunit; KEGG: alv:Alvin_2961 solute symporter protein YP_004541716.1 KEGG: amr:AM1_5246 sodium/solute symporter, TIGRFAM: Sodium/solute symporter, VC2705 subfamily; PFAM: Sodium/solute symporter YP_004541717.1 KEGG: ske:Sked_25030 ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004541718.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_1064 hypothetical protein YP_004541719.1 KEGG: ske:Sked_24970 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain YP_004541720.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: xce:Xcel_1067 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004541721.1 KEGG: xce:Xcel_1069 chaperonin Cpn10; manually curated; PFAM: Chaperonin Cpn10 YP_004541722.1 KEGG: car:cauri_0633 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase, N-terminal; acyl-CoA oxidase/dehydrogenase, central region; acyl-CoA oxidase/dehydrogenase, type 1 YP_004541723.1 KEGG: bcv:Bcav_1376 hypothetical protein YP_004541724.1 KEGG: fre:Franean1_3178 hypothetical protein YP_004541725.1 TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: xce:Xcel_1073 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase YP_004541726.1 KEGG: xce:Xcel_1082 hypothetical protein YP_004541727.1 HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: xce:Xcel_1083 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004541728.1 KEGG: sro:Sros_2557 hypothetical protein YP_004541729.1 KEGG: xce:Xcel_1086 hypothetical protein YP_004541730.1 KEGG: xce:Xcel_1087 ABC transporter YP_004541731.1 KEGG: xce:Xcel_1088 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004541732.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: xce:Xcel_1089 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004541733.1 KEGG: xce:Xcel_1090 hypothetical protein YP_004541734.1 KEGG: xce:Xcel_1091 ABC transporter YP_004541735.1 PFAM: Thioesterase superfamily; KEGG: xce:Xcel_1095 thioesterase superfamily protein YP_004541736.1 manually curated; KEGG: xce:Xcel_1096 viral-like DNA topoisomerase YP_004541737.1 KEGG: xce:Xcel_1097 acyl-CoA thioesterase; PFAM: acyl-CoA thioesterase YP_004541738.1 PFAM: Globin, truncated bacterial-like; KEGG: cfl:Cfla_1359 globin YP_004541739.1 PFAM: phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: xce:Xcel_1099 phosphotransferase system PTS EIIB protein YP_004541740.1 PFAM: Mechanosensitive ion channel MscS; KEGG: xce:Xcel_1100 MscS mechanosensitive ion channel YP_004541741.1 TIGRFAM: glycoside hydrolase, family 77; KEGG: xce:Xcel_1101 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77 YP_004541742.1 TIGRFAM: peptidase M1, aminopeptidase N actinomycete-type; KEGG: ske:Sked_24580 aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase, N-terminal YP_004541743.1 KEGG: xce:Xcel_1103 hypothetical protein YP_004541744.1 KEGG: xce:Xcel_1104 neprilysin; PFAM: peptidase M13; peptidase M13, neprilysin, C-terminal YP_004541745.1 TIGRFAM: ribose 5-phosphate isomerase, actinobacteria; ribose/galactose isomerase; KEGG: ske:Sked_24510 ribose 5-phosphate isomerase; PFAM: ribose/galactose isomerase YP_004541746.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; KEGG: xce:Xcel_1106 DNA glycosylase/AP lyase, H2TH DNA-binding protein YP_004541747.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: xce:Xcel_1107 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein YP_004541748.1 KEGG: xce:Xcel_1108 luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv3520c; PFAM: Luciferase-like, subgroup YP_004541749.1 KEGG: bcv:Bcav_3170 protein of unknown function DUF661 YP_004541751.1 PFAM: Abortive infection protein; KEGG: nda:Ndas_4306 hypothetical protein YP_004541752.1 KEGG: xce:Xcel_1109 hypothetical protein YP_004541753.1 KEGG: cfl:Cfla_1388 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004541754.1 KEGG: xce:Xcel_1110 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase YP_004541755.1 TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: xce:Xcel_1111 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004541756.1 TIGRFAM: CocE/NonD hydrolase; KEGG: sco:SCO0501 secreted protein YP_004541758.1 KEGG: nda:Ndas_0743 hypothetical protein YP_004541759.1 PFAM: transcriptional regulator PadR N-terminal-like; KEGG: rha:RHA1_ro00244 hypothetical protein YP_004541760.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cfl:Cfla_3202 glyoxalase/bleomycin resistance protein/dioxygenase YP_004541761.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: xce:Xcel_1118 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial YP_004541762.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: xce:Xcel_1119 endopeptidase Clp; PFAM: peptidase S14, ClpP YP_004541763.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: xce:Xcel_1120 endopeptidase Clp; PFAM: peptidase S14, ClpP YP_004541764.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: xce:Xcel_1121 ATP-dependent Clp protease, ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal YP_004541765.1 KEGG: xce:Xcel_1122 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004541766.1 KEGG: xce:Xcel_1123 chorismate mutase; TIGRFAM: Chorismate mutase, bacteria; PFAM: Chorismate mutase, type II YP_004541767.1 KEGG: xce:Xcel_1124 hypothetical protein YP_004541768.1 HAMAP: Valyl-tRNA synthetase YP_004541769.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: gob:Gobs_2310 NADP oxidoreductase coenzyme F420-dependent YP_004541770.1 KEGG: ske:Sked_24120 F420-dependent methylene-tetrahydromethanopterin reductase; TIGRFAM: Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup YP_004541771.1 KEGG: xce:Xcel_1131 F420-dependent oxidoreductase; TIGRFAM: F420-0:gamma-glutamyl ligase; PFAM: F420-0:gamma-glutamyl ligase-related YP_004541772.1 KEGG: bcv:Bcav_4115 hypothetical protein YP_004541773.1 PFAM: YbaK/aminoacyl-tRNA synthetase associated region; KEGG: tcu:Tcur_3021 YbaK/prolyl-tRNA synthetase associated region YP_004541774.1 KEGG: bcv:Bcav_3954 CHRD domain containing protein; PFAM: CHRD; SMART: CHRD YP_004541775.1 PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: xce:Xcel_0246 TRAP dicarboxylate transporter-DctP subunit YP_004541776.1 KEGG: xce:Xcel_1464 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004541777.1 KEGG: xce:Xcel_0245 hypothetical protein YP_004541778.1 KEGG: xce:Xcel_0244 LuxR family two component transcriptional regulator; PFAM: transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region YP_004541779.1 KEGG: ica:Intca_0899 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004541780.1 KEGG: xce:Xcel_0271 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like YP_004541781.1 KEGG: ttm:Tthe_0802 transcriptional regulator, AbrB family; TIGRFAM: transcription regulator AbrB; PFAM: transcription regulator AbrB/SpoV, predicted YP_004541782.1 TIGRFAM: Protein of unknown function DUF132; PFAM: PilT protein, N-terminal; KEGG: ttm:Tthe_0801 PilT protein domain protein; SMART: Nucleotide binding protein, PINc YP_004541783.1 PFAM: Uncharacterised conserved protein UCP028408; KEGG: aai:AARI_33400 hypothetical protein YP_004541784.1 KEGG: mlu:Mlut_22910 hypothetical protein YP_004541785.1 KEGG: aai:AARI_33370 hypothetical protein YP_004541786.1 KEGG: aai:AARI_33360 hypothetical protein YP_004541787.1 PFAM: Aminoglycoside phosphotransferase; KEGG: ske:Sked_19670 hypothetical protein YP_004541788.1 KEGG: mts:MTES_3096 N-Dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase YP_004541789.1 KEGG: xce:Xcel_2074 hypothetical protein YP_004541790.1 PFAM: Metallophosphoesterase; KEGG: cef:CE2911 phosphoesterase YP_004541792.1 KEGG: mta:Moth_1767 hypothetical protein YP_004541794.1 KEGG: nca:Noca_3332 hypothetical protein YP_004541795.1 KEGG: nca:Noca_3331 helix-turn-helix domain-containing protein YP_004541796.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165; KEGG: kse:Ksed_23490 transposase family protein YP_004541797.1 PFAM: glycoside hydrolase, family 43; KEGG: bha:BH1878 hypothetical protein YP_004541798.1 KEGG: sgr:SGR_3316 hypothetical protein YP_004541800.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: ica:Intca_1488 5-methylcytosine restriction system component-like protein YP_004541801.1 KEGG: ica:Intca_1487 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core YP_004541802.1 KEGG: xce:Xcel_2325 hypothetical protein YP_004541803.1 KEGG: gob:Gobs_3741 hypothetical protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Protein of unknown function DUF1998; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541804.1 KEGG: saq:Sare_3087 hypothetical protein YP_004541805.1 manually curated; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; KEGG: gob:Gobs_3743 helicase domain-containing protein; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal YP_004541806.1 KEGG: tcu:Tcur_1957 hypothetical protein YP_004541807.1 KEGG: bcv:Bcav_3381 hypothetical protein YP_004541808.1 KEGG: sgr:SGR_924 hypothetical protein; PFAM: Protein of unknown function DUF1080; carbohydrate binding domain, family 6; PKD; SMART: Cellulose binding, type IV; PKD YP_004541809.1 KEGG: fri:FraEuI1c_2969 hypothetical protein YP_004541810.1 PFAM: Protein of unknown function DUF86 YP_004541811.1 PFAM: Nucleotidyltransferase; KEGG: afo:Afer_0033 transcriptional regulator, XRE family YP_004541812.1 PFAM: Amylo-alpha-1,6-glucosidase; KEGG: xce:Xcel_1137 amylo-alpha-16-glucosidase YP_004541813.1 KEGG: ske:Sked_06350 transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004541814.1 KEGG: ddd:Dda3937_00143 exopolygalacturonate lyase PelX YP_004541815.1 PFAM: Divalent ion tolerance protein, CutA1; KEGG: nda:Ndas_4630 CutA1 divalent ion tolerance protein YP_004541817.1 KEGG: mil:ML5_3197 hypothetical protein YP_004541818.1 KEGG: ami:Amir_3989 glutathione S-transferase; PFAM: glutathione S-transferase, C-terminal YP_004541819.1 KEGG: xce:Xcel_1404 hypothetical protein YP_004541821.1 KEGG: sro:Sros_2455 hypothetical protein YP_004541822.1 KEGG: xce:Xcel_1142 HhH-GPD family protein; TIGRFAM: Conserved hypothetical protein CHP03252, HhH-GPD; PFAM: HhH-GPD domain YP_004541823.1 KEGG: apn:Asphe3_07940 hypothetical protein YP_004541824.1 KEGG: mab:MAB_3980 hypothetical protein YP_004541825.1 KEGG: xce:Xcel_1144 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004541826.1 PFAM: ABC transporter-like; KEGG: ske:Sked_23980 cobalamin/Fe3+-siderophore ABC transporter ATPase; SMART: ATPase, AAA+ type, core YP_004541827.1 KEGG: ske:Sked_23970 Fe3+-siderophore ABC transporter permease; TIGRFAM: proposed F420-0 ABC transporter, permease protein; PFAM: Bacterial transport system permease protein YP_004541828.1 KEGG: ske:Sked_23960 Fe3+-hydroxamate ABC transporter periplasmic protein; TIGRFAM: proposed F420-0 ABC transporter, periplasmic F420-0 binding protein; PFAM: Periplasmic binding protein YP_004541829.1 PFAM: Methyltransferase type 11; KEGG: mau:Micau_1427 methyltransferase YP_004541830.1 KEGG: mil:ML5_0285 hypothetical protein YP_004541831.1 PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation; KEGG: xce:Xcel_1388 oxidoreductase molybdopterin binding protein YP_004541832.1 KEGG: xce:Xcel_1145 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004541833.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: xce:Xcel_1148 isoleucyl-tRNA synthetase YP_004541834.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: xce:Xcel_1149 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central YP_004541835.1 TIGRFAM: dihydroxyacetone kinase DhaK, subunit 1; KEGG: xce:Xcel_1154 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_004541836.1 KEGG: xce:Xcel_1155 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase YP_004541837.1 KEGG: xce:Xcel_1156 dihydroxyacetone kinase, phosphotransfer subunit; TIGRFAM: dihydroxyacetone kinase, subunit phosphotransferase; phosphotransferase system, phosphocarrier HPr protein; PFAM: phosphotransferase system, fructose subfamily IIA component; phosphotransferase system, phosphocarrier HPr protein YP_004541838.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_2112 TetR family transcriptional regulator YP_004541839.1 KEGG: xce:Xcel_2111 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004541840.1 KEGG: xce:Xcel_1157 hypothetical protein YP_004541841.1 SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: ske:Sked_23840 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core YP_004541842.1 KEGG: xce:Xcel_1160 hypothetical protein YP_004541843.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: cfl:Cfla_1464 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core YP_004541844.1 KEGG: jde:Jden_0980 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter YP_004541845.1 PFAM: Nitrogen regulatory protein PII; KEGG: xce:Xcel_1163 nitrogen regulatory protein P-II YP_004541846.1 PFAM: PII-uridylyltransferase/glutamine-synthetase adenylyltransferase; Protein of unknown function DUF294, nucleotidyltransferase ; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: xce:Xcel_1164 UTP-GlnB uridylyltransferase, GlnD; SMART: Metal-dependent phosphohydrolase, HD region YP_004541847.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: xce:Xcel_1165 signal recognition particle protein; SMART: ATPase, AAA+ type, core YP_004541848.1 PFAM: Amidohydrolase 1; KEGG: xce:Xcel_1166 amidohydrolase YP_004541849.1 TIGRFAM: ribosomal protein S16; HAMAP: ribosomal protein S16; KEGG: xce:Xcel_1167 30S ribosomal protein S16; PFAM: ribosomal protein S16 YP_004541850.1 HAMAP: Uncharacterised protein family UPF0109, bacterial; KEGG: xce:Xcel_1168 RNA-binding protein (KH domain) YP_004541851.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: xce:Xcel_1169 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel YP_004541852.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: xce:Xcel_1170 tRNA (guanine-N1)-methyltransferase YP_004541853.1 TIGRFAM: ribosomal protein L19; HAMAP: ribosomal protein L19; KEGG: xce:Xcel_1171 50S ribosomal protein L19; PFAM: ribosomal protein L19 YP_004541854.1 KEGG: xce:Xcel_1172 signal peptidase I; TIGRFAM: peptidase S26A, signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_004541855.1 KEGG: xce:Xcel_1173 ribonuclease H; PFAM: ribonuclease HII/HIII YP_004541856.1 PFAM: Protein of unknown function DUF2469; KEGG: xce:Xcel_1174 hypothetical protein YP_004541857.1 KEGG: cfl:Cfla_1478 protein of unknown function UPF0102; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102 YP_004541858.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: xce:Xcel_1176 Mg chelatase subunit ChlI; SMART: ATPase, AAA+ type, core YP_004541859.1 KEGG: xce:Xcel_1177 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A YP_004541860.1 KEGG: xce:Xcel_1178 integrase family protein; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004541861.1 PFAM: peptidase M23; KEGG: xce:Xcel_1179 peptidase M23 YP_004541862.1 KEGG: cfl:Cfla_1484 ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: ribosomal protein S2 YP_004541863.1 TIGRFAM: translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: xce:Xcel_1181 translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal YP_004541864.1 KEGG: ske:Sked_23590 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase YP_004541865.1 TIGRFAM: ribosome recycling factor; HAMAP: ribosome recycling factor, bacterial-like; KEGG: xce:Xcel_1183 ribosome recycling factor; PFAM: ribosome recycling factor YP_004541866.1 PFAM: phosphatidate cytidylyltransferase; KEGG: xce:Xcel_1184 phosphatidate cytidylyltransferase YP_004541867.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: ribosomal RNA large subunit methyltransferase RlmN; KEGG: ske:Sked_23560 radical SAM enzyme, Cfr family; HAMAP: ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM YP_004541868.1 TIGRFAM: Conserved hypothetical protein CHP03543; DivIVA domain; KEGG: xce:Xcel_1186 hypothetical protein YP_004541869.1 KEGG: msm:MSMEG_4397 transcriptional regulator, MerR family protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004541870.1 PFAM: Major facilitator superfamily MFS-1; Sodium/calcium exchanger membrane region; KEGG: cms:CMS_0595 integral membrane transport protein YP_004541871.1 KEGG: xce:Xcel_1198 hypothetical protein YP_004541872.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: xce:Xcel_1200 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004541873.1 PFAM: peptidase M50; KEGG: xce:Xcel_1201 peptidase M50 YP_004541874.1 TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: cfl:Cfla_1501 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YP_004541875.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1203 GCN5-related N-acetyltransferase YP_004541876.1 KEGG: xce:Xcel_1205 DNA-formamidopyrimidine glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain YP_004541877.1 TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: xce:Xcel_1206 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding YP_004541878.1 KEGG: xce:Xcel_1207 hypothetical protein YP_004541879.1 KEGG: xce:Xcel_1208 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090 YP_004541880.1 KEGG: xce:Xcel_1209 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: transcription factor NusA, N-terminal YP_004541881.1 KEGG: bcv:Bcav_2490 protein of unknown function DUF448; manually curated; PFAM: Protein of unknown function DUF448 YP_004541882.1 KEGG: xce:Xcel_1211 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; translation initiation factor IF-2, N-terminal; translation elongation factor EFTu/EF1A, domain 2 YP_004541883.1 TIGRFAM: ribosome-binding factor A; HAMAP: ribosome-binding factor A; KEGG: xce:Xcel_1212 ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004541884.1 TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: xce:Xcel_1213 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 2, C-terminal, bacterial-type YP_004541885.1 TIGRFAM: riboflavin kinase/FAD synthetase; Cytidyltransferase-related; KEGG: xce:Xcel_1215 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase YP_004541886.1 KEGG: xce:Xcel_1216 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial-type; PFAM: ribosomal protein S15 YP_004541887.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; ribosomal protein S1, RNA binding domain; TIGRFAM: Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: xce:Xcel_1217 guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase YP_004541888.1 KEGG: xce:Xcel_1218 peptidase M16 domain-containing protein; PFAM: peptidase M16, N-terminal; peptidase M16, C-terminal YP_004541889.1 PFAM: dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase, bacterial/plant; HAMAP: dihydrodipicolinate reductase; KEGG: xce:Xcel_1219 dihydrodipicolinate reductase YP_004541890.1 KEGG: xce:Xcel_1220 hypothetical protein YP_004541891.1 KEGG: xce:Xcel_1221 hypothetical protein YP_004541892.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1223 GCN5-related N-acetyltransferase YP_004541893.1 PFAM: Branched-chain amino acid transport; KEGG: xce:Xcel_1226 branched-chain amino acid transport YP_004541894.1 KEGG: xce:Xcel_1227 AzlC family protein; manually curated; PFAM: AzlC-like YP_004541895.1 KEGG: xce:Xcel_1228 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004541896.1 PFAM: dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase subfamily; HAMAP: dihydrodipicolinate synthase; KEGG: xce:Xcel_1229 dihydrodipicolinate synthase YP_004541897.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: xce:Xcel_1230 beta-lactamase domain-containing protein YP_004541898.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_1231 TetR family transcriptional regulator YP_004541899.1 KEGG: xce:Xcel_1232 hypothetical protein YP_004541900.1 KEGG: xce:Xcel_1234 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core YP_004541901.1 PFAM: Capsule synthesis protein, CapA; KEGG: xce:Xcel_1235 enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein YP_004541902.1 KEGG: xce:Xcel_1236 CDP-diacylglycerol/glycerol-3-phosphate3- phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004541903.1 KEGG: xce:Xcel_1237 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal YP_004541904.1 KEGG: xce:Xcel_1238 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004541905.1 KEGG: xce:Xcel_1239 DNA glycosylase/AP lyase, H2TH DNA-binding protein; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004541906.1 KEGG: xce:Xcel_1240 DEAD/H associated domain-containing protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal YP_004541907.1 KEGG: ske:Sked_23210 hypothetical protein YP_004541908.1 KEGG: cfl:Cfla_1544 hypothetical protein YP_004541909.1 SMART: Hedgehog/intein hint, N-terminal; ATPase, AAA+ type, core; Hedgehog/intein hint domain, C-terminal; TIGRFAM: DNA recombination and repair protein RecA; Intein splicing site; KEGG: tcu:Tcur_3294 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; LAGLIDADG DNA endonuclease YP_004541910.1 KEGG: xce:Xcel_1243 regulatory protein RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX YP_004541911.1 KEGG: xce:Xcel_1244 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004541912.1 KEGG: xce:Xcel_1245 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004541913.1 KEGG: bcv:Bcav_2444 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3 YP_004541914.1 PFAM: ABC transporter-like; KEGG: apn:Asphe3_26630 amino acid ABC transporter ATP-binding protein, PAAT family; SMART: ATPase, AAA+ type, core YP_004541915.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: xce:Xcel_1248 RNA modification enzyme, MiaB family; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_004541916.1 KEGG: xce:Xcel_1249 hypothetical protein YP_004541917.1 KEGG: xce:Xcel_1250 hypothetical protein YP_004541918.1 KEGG: xce:Xcel_1251 hypothetical protein YP_004541919.1 KEGG: nda:Ndas_3676 hypothetical protein YP_004541920.1 PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: xce:Xcel_1252 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase YP_004541921.1 PFAM: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: xce:Xcel_1253 diaminopimelate epimerase YP_004541922.1 PFAM: Methyltransferase small; KEGG: xce:Xcel_1254 methyltransferase small YP_004541923.1 KEGG: xce:Xcel_1255 GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related YP_004541924.1 KEGG: xce:Xcel_1256 helicase C2; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal YP_004541925.1 PFAM: Lactate/malate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; HAMAP: L-lactate dehydrogenase; KEGG: xce:Xcel_1257 L-lactate dehydrogenase YP_004541926.1 TIGRFAM: peptidase S24, LexA repressor; HAMAP: LexA repressor; KEGG: xce:Xcel_1258 SOS-response transcriptional repressor, LexA; PFAM: LexA DNA-binding region; peptidase S24/S26A/S26B, conserved region YP_004541927.1 KEGG: xce:Xcel_1259 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding Lysin subgroup YP_004541928.1 TIGRFAM: ribonucleotide reductase regulator NrdR-like; HAMAP: transcriptional repressor nrdR; KEGG: cfl:Cfla_1569 ATP-cone domain protein; PFAM: ATP-cone YP_004541929.1 KEGG: xce:Xcel_2088 hypothetical protein YP_004541930.1 KEGG: xce:Xcel_1261 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT YP_004541931.1 PFAM: DNA helicase, UvrD/REP type; KEGG: xce:Xcel_1262 superfamily I DNA and RNA helicase-like protein YP_004541932.1 KEGG: xce:Xcel_1263 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Protein phosphatase 2C-related YP_004541933.1 KEGG: xce:Xcel_1264 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004541934.1 KEGG: cfl:Cfla_1578 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region YP_004541935.1 KEGG: xce:Xcel_1266 hypothetical protein YP_004541936.1 KEGG: xce:Xcel_1267 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004541937.1 KEGG: xce:Xcel_1268 spermidine synthase-like protein YP_004541938.1 KEGG: xce:Xcel_1269 colicin uptake-like protein YP_004541939.1 HAMAP: DNA polymerase IV; KEGG: xce:Xcel_1270 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like YP_004541940.1 KEGG: ske:Sked_22900 hypothetical protein YP_004541941.1 KEGG: xce:Xcel_1272 transglutaminase domain-containing protein; PFAM: transglutaminase-like; SMART: transglutaminase-like YP_004541942.1 PFAM: Protein of unknown function DUF58; KEGG: xce:Xcel_1273 hypothetical protein YP_004541943.1 KEGG: xce:Xcel_1274 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core YP_004541944.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: xce:Xcel_1275 MraZ protein; PFAM: MraZ domain YP_004541945.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: xce:Xcel_1276 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW YP_004541946.1 KEGG: xce:Xcel_1277 hypothetical protein YP_004541947.1 KEGG: xce:Xcel_1278 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain YP_004541948.1 PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: xce:Xcel_1279 UDP-N-acetylmuramyl-tripeptide synthetase YP_004541949.1 TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: xce:Xcel_1280 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal YP_004541950.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: xce:Xcel_1281 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004541951.1 TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: xce:Xcel_1282 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal YP_004541952.1 KEGG: xce:Xcel_1283 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein YP_004541953.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: xce:Xcel_1284 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase, family 28; glycosyl transferase, family 28, C-terminal YP_004541954.1 PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: xce:Xcel_1285 UDP-N-acetylmuramate/alanine ligase YP_004541955.1 PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: xce:Xcel_1286 cell division protein FtsQ YP_004541956.1 KEGG: xce:Xcel_1287 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain YP_004541957.1 KEGG: xce:Xcel_1288 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase YP_004541958.1 KEGG: xce:Xcel_1289 hypothetical protein; HAMAP: Cell division protein sepF; PFAM: Cell division protein SepF YP_004541959.1 PFAM: Protein of unknown function YGGT; KEGG: xce:Xcel_1290 hypothetical protein YP_004541960.1 KEGG: xce:Xcel_1291 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA YP_004541961.1 KEGG: xce:Xcel_1292 TraR/DksA family transcriptional regulator YP_004541962.1 TIGRFAM: peptidase A8, signal peptidase II; HAMAP: peptidase A8, signal peptidase II; KEGG: cfl:Cfla_1604 lipoprotein signal peptidase; PFAM: peptidase A8, signal peptidase II YP_004541963.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: xce:Xcel_1294 pseudouridine synthase, RluA family; SMART: RNA-binding S4 YP_004541964.1 PFAM: Protein of unknown function DUF1232; KEGG: mjl:Mjls_4982 hypothetical protein YP_004541965.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: xce:Xcel_1296 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_004541966.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_1297 NUDIX hydrolase YP_004541967.1 KEGG: xce:Xcel_1298 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004541968.1 KEGG: xce:Xcel_2721 hypothetical protein YP_004541969.1 PFAM: RNA-binding S4; KEGG: xce:Xcel_1301 RNA-binding S4 domain-containing protein YP_004541970.1 PFAM: histidinol dehydrogenase, prokaryotic-type; TIGRFAM: histidinol dehydrogenase, prokaryotic-type; HAMAP: histidinol dehydrogenase, prokaryotic-type; KEGG: xce:Xcel_1302 histidinol dehydrogenase YP_004541971.1 KEGG: rop:ROP_32750 hypothetical protein YP_004541972.1 KEGG: cfl:Cfla_3314 SNF2-related protein; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541973.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: xce:Xcel_1305 RecQ family ATP-dependent DNA helicase; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004541974.1 KEGG: ica:Intca_1024 hypothetical protein YP_004541975.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: xce:Xcel_1306 Rieske (2Fe-2S) domain-containing protein YP_004541976.1 KEGG: ske:Sked_22550 histidinol phosphate aminotransferase; manually curated; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; HAMAP: histidinol-phosphate aminotransferase YP_004541977.1 HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: xce:Xcel_1308 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase YP_004541978.1 KEGG: xce:Xcel_1309 hypothetical protein YP_004541979.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: xce:Xcel_1310 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I, C-terminal YP_004541980.1 PFAM: histidine biosynthesis; TIGRFAM: Bifunctional HisA/TrpF; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: xce:Xcel_1311 bifunctional HisA/TrpF protein YP_004541981.1 KEGG: xce:Xcel_1312 hypothetical protein YP_004541982.1 PFAM: peptidase S1/S6, chymotrypsin/Hap; KEGG: xce:Xcel_1313 peptidase S1 and S6 chymotrypsin/Hap YP_004541983.1 KEGG: xce:Xcel_1314 hypothetical protein YP_004541984.1 KEGG: xce:Xcel_1315 hypothetical protein YP_004541985.1 KEGG: ske:Sked_22460 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive YP_004541986.1 PFAM: Ferric-uptake regulator; KEGG: cfl:Cfla_1623 ferric uptake regulator, Fur family YP_004541987.1 PFAM: translation initiation factor 3, C-terminal; translation initiation factor 3, N-terminal; manually curated; TIGRFAM: translation initiation factor 3; KEGG: xce:Xcel_1316 translation initiation factor IF-3; HAMAP: translation initiation factor IF-3 YP_004541988.1 TIGRFAM: ribosomal protein L35; HAMAP: ribosomal protein L35; KEGG: xce:Xcel_1317 50S ribosomal protein L35; PFAM: ribosomal protein L35 YP_004541989.1 TIGRFAM: ribosomal protein L20; HAMAP: ribosomal protein L20; KEGG: xce:Xcel_1318 50S ribosomal protein L20; PFAM: ribosomal protein L20 YP_004541990.1 PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: xce:Xcel_1319 tRNA/rRNA methyltransferase SpoU YP_004541991.1 KEGG: xce:Xcel_1320 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: phosphoesterase, HXTX YP_004541992.1 TIGRFAM: phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: phenylalanyl-tRNA synthetase alpha chain; KEGG: xce:Xcel_1321 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase alpha chain; phenylalanyl-tRNA synthetase, class II, N-terminal YP_004541993.1 TIGRFAM: phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: xce:Xcel_1322 phenylalanyl-tRNA synthetase subunit beta YP_004541994.1 PFAM: Short-chain dehydrogenase/reductase SDR; Replication endonuclease, probable, phage; KEGG: bcv:Bcav_2376 short-chain dehydrogenase/reductase SDR YP_004541995.1 TIGRFAM: F420-dependent oxidoreductase, MSMEG_2906 family; KEGG: xce:Xcel_1324 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_004541996.1 KEGG: bcv:Bcav_4083 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11 YP_004541997.1 PFAM: ATP-binding region, ATPase-like; KEGG: fre:Franean1_3845 integral membrane sensor signal transduction histidine kinase YP_004541998.1 KEGG: scl:sce5430 hypothetical protein YP_004541999.1 KEGG: xce:Xcel_1325 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like YP_004542000.1 PFAM: transposase, IS116/IS110/IS902; transposase, IS111A/IS1328/IS1533; KEGG: mav:MAV_1059 transposase YP_004542001.1 PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: xce:Xcel_1327 N-acetyl-gamma-glutamyl-phosphate reductase YP_004542002.1 PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: ske:Sked_22320 glutamate N-acetyltransferase YP_004542003.1 TIGRFAM: acetylglutamate kinase; KEGG: xce:Xcel_1329 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_004542004.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine/succinylornithine aminotransferase; HAMAP: acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: xce:Xcel_1330 acetylornithine and succinylornithine aminotransferase YP_004542005.1 PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: xce:Xcel_1331 ornithine carbamoyltransferase YP_004542006.1 TIGRFAM: Arginine repressor; HAMAP: Arginine repressor; KEGG: xce:Xcel_1332 arginine repressor, ArgR; PFAM: Arginine repressor YP_004542007.1 PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: ske:Sked_22270 argininosuccinate synthase YP_004542008.1 PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: xce:Xcel_1333 argininosuccinate lyase YP_004542009.1 KEGG: xce:Xcel_1334 uridine kinase YP_004542010.1 TIGRFAM: Methylpurine-DNA glycosylase (MPG); HAMAP: 3-methyladenine DNA glycosylase; KEGG: xce:Xcel_1335 DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG) YP_004542011.1 KEGG: xce:Xcel_1336 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HAMAP: Tyrosyl-tRNA synthetase; SMART: RNA-binding S4 YP_004542012.1 KEGG: xce:Xcel_1337 hypothetical protein YP_004542013.1 KEGG: xce:Xcel_1338 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase YP_004542015.1 TIGRFAM: Haemolysin A; PFAM: RNA-binding S4; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: xce:Xcel_1340 hemolysin A; SMART: RNA-binding S4 YP_004542016.1 KEGG: xce:Xcel_1341 NAD(+) kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_004542017.1 KEGG: xce:Xcel_1342 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal YP_004542018.1 PFAM: Thiamin pyrophosphokinase, catalytic domain; KEGG: xce:Xcel_1343 thiamin pyrophosphokinase catalytic region YP_004542019.1 KEGG: xce:Xcel_1344 hypothetical protein YP_004542020.1 KEGG: xce:Xcel_1345 hypothetical protein YP_004542021.1 PFAM: Flagellin assembly, membrane protein MviN; KEGG: xce:Xcel_1346 virulence factor MviN family protein YP_004542022.1 PFAM: CTP synthase, N-terminal; glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: xce:Xcel_1347 CTP synthase YP_004542023.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_1348 NUDIX hydrolase YP_004542024.1 PFAM: Cytochrome oxidase assembly; KEGG: xce:Xcel_1353 cytochrome oxidase assembly YP_004542025.1 PFAM: ABC-2 type transporter; KEGG: xce:Xcel_1354 ABC-2 type transporter YP_004542026.1 manually curated; PFAM: ABC transporter-like; KEGG: cfl:Cfla_1668 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004542027.1 KEGG: bcv:Bcav_4031 protein of unknown function DUF308 membrane YP_004542028.1 KEGG: xce:Xcel_1356 transcriptional regulator YP_004542029.1 KEGG: jde:Jden_1140 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD YP_004542030.1 KEGG: xce:Xcel_1358 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD YP_004542031.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: xce:Xcel_1359 Rieske (2Fe-2S) domain-containing protein YP_004542032.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: xce:Xcel_1360 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core YP_004542033.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: xce:Xcel_1361 cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004542034.1 KEGG: xce:Xcel_1362 SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal YP_004542035.1 PFAM: Protein of unknown function DUF59; KEGG: xce:Xcel_1363 hypothetical protein YP_004542036.1 PFAM: Protein of unknown function, zinc metallopeptidase KEGG: xce:Xcel_1412 hypothetical protein YP_004542037.1 KEGG: xce:Xcel_1411 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004542038.1 KEGG: xce:Xcel_1413 hypothetical protein YP_004542039.1 KEGG: xce:Xcel_1414 hypothetical protein YP_004542040.1 KEGG: xce:Xcel_1415 hypothetical protein YP_004542041.1 TIGRFAM: 3-oxoacyl-ACP reductase; KEGG: ske:Sked_21780 3-oxoacyl-ACP reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004542042.1 KEGG: cfl:Cfla_1687 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004542043.1 PFAM: phosphoglycerate mutase; KEGG: xce:Xcel_1418 phosphohistidine phosphatase, SixA YP_004542044.1 PFAM: Isochorismatase-like; KEGG: kra:Krad_0796 isochorismatase hydrolase YP_004542045.1 PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: kfl:Kfla_6248 permease for cytosine/purines uracil thiamine allantoin YP_004542046.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: ske:Sked_21750 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase YP_004542047.1 PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: xce:Xcel_1420 glucose-1-phosphate adenylyltransferase YP_004542048.1 KEGG: xce:Xcel_1421 glycogen synthase; TIGRFAM: glycogen synthase, corynebacterial; PFAM: glycosyl transferase, group 1 YP_004542049.1 KEGG: xce:Xcel_1426 hypothetical protein YP_004542050.1 KEGG: xce:Xcel_1427 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004542051.1 PFAM: Nodulation efficiency, NfeD; KEGG: xce:Xcel_1428 hypothetical protein YP_004542052.1 KEGG: xce:Xcel_1429 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein YP_004542053.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_1430 regulatory protein TetR YP_004542054.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1431 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542055.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1432 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542056.1 PFAM: carboxylesterase, type B; KEGG: scb:SCAB_22881 membrane-anchored peptidase YP_004542057.1 KEGG: xce:Xcel_1433 glycoside hydrolase family 10; PFAM: glycoside hydrolase, family 10; SMART: glycoside hydrolase, family 10 YP_004542058.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: xce:Xcel_1436 tRNA/rRNA methyltransferase SpoU YP_004542059.1 PFAM: UspA; KEGG: cfl:Cfla_1242 UspA domain protein YP_004542060.1 KEGG: xce:Xcel_1537 hypothetical protein YP_004542061.1 KEGG: xce:Xcel_0782 hypothetical protein YP_004542062.1 SMART: HNH nuclease; KEGG: mpa:MAP3151 hypothetical protein YP_004542063.1 PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: xce:Xcel_1437 FAD-binding 9 siderophore-interacting domain-containing protein YP_004542064.1 KEGG: apn:Asphe3_34950 hypothetical protein YP_004542065.1 PFAM: YbaK/aminoacyl-tRNA synthetase associated region; KEGG: xce:Xcel_1438 YbaK/prolyl-tRNA synthetase associated region YP_004542066.1 KEGG: ami:Amir_5877 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: phosphatidylethanolamine-binding protein PEBP YP_004542067.1 KEGG: rha:RHA1_ro02724 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_004542068.1 KEGG: xce:Xcel_1439 hypothetical protein YP_004542069.1 PFAM: DNA-repair protein, UmuC-like; KEGG: xce:Xcel_1440 hypothetical protein YP_004542070.1 KEGG: cfl:Cfla_2038 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: DNA polymerase III, alpha subunit; HAMAP: Error-prone DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal YP_004542071.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sna:Snas_6053 glycerophosphoryl diester phosphodiesterase YP_004542072.1 KEGG: bcv:Bcav_3693 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004542073.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: bcv:Bcav_3694 activator of HSP90 ATPase 1 family protein YP_004542074.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_1567 GCN5-related protein N-acetyltransferase YP_004542075.1 KEGG: mau:Micau_4265 hypothetical protein YP_004542076.1 KEGG: xce:Xcel_1442 hypothetical protein; PFAM: RIO-like kinase; SMART: RIO kinase YP_004542077.1 KEGG: mts:MTES_1596 Zn-dependent hydrolase, including glyoxylase YP_004542079.1 KEGG: nml:Namu_0748 hypothetical protein YP_004542080.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: xce:Xcel_1445 membrane-bound metal-dependent hydrolase YP_004542081.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: nda:Ndas_2703 alcohol dehydrogenase GroES domain protein YP_004542083.1 KEGG: xce:Xcel_1468 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0118 YP_004542084.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1471 acetyltransferase, GNAT family YP_004542085.1 KEGG: xce:Xcel_1473 peptidyl-dipeptidase DCP; PFAM: peptidase M3A/M3B, thimet/oligopeptidase F YP_004542086.1 PFAM: peptidase M20; peptidase M20, dimerisation; KEGG: xce:Xcel_1474 peptidase M20 YP_004542087.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: cfl:Cfla_2019 fructosamine/ketosamine-3-kinase YP_004542088.1 KEGG: xce:Xcel_1475 hypothetical protein YP_004542089.1 KEGG: cfl:Cfla_2013 hypothetical protein YP_004542090.1 PFAM: Aldo/keto reductase; KEGG: xce:Xcel_1477 aldo/keto reductase YP_004542091.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: UDP-diphosphatase; KEGG: xce:Xcel_1478 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004542092.1 TIGRFAM: Mycothiol biosynthesis protein, MshC; KEGG: ske:Sked_20970 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal YP_004542093.1 KEGG: xce:Xcel_1480 hypothetical protein YP_004542094.1 PFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: xce:Xcel_2766 survival protein SurE YP_004542095.1 PFAM: carbohydrate/purine kinase; KEGG: xce:Xcel_2767 PfkB domain-containing protein YP_004542096.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cfl:Cfla_2980 short-chain dehydrogenase/reductase SDR YP_004542097.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cef:CE0059 hypothetical protein YP_004542098.1 manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: xce:Xcel_1481 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase YP_004542099.1 KEGG: xce:Xcel_1482 RecB family exonuclease-like protein YP_004542100.1 PFAM: peptidase M50; KEGG: xce:Xcel_1483 peptidase M50 YP_004542101.1 KEGG: xce:Xcel_1484 tRNA methyltransferase complex GCD14 subunit; PFAM: tRNA methyltransferase complex GCD14 subunit YP_004542102.1 SMART: ATPase, AAA+ type, core; TIGRFAM: proteasome ATPase; KEGG: xce:Xcel_1485 AAA ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core YP_004542103.1 KEGG: xce:Xcel_1486 hypothetical protein; TIGRFAM: proteasome accessory factor PafA2; PFAM: Protein of unknown function DUF245, C-terminal; Protein of unknown function DUF275, N-terminal YP_004542104.1 TIGRFAM: ubiquitin-like protein Pup; HAMAP: Ubiquitin-like protein pup; KEGG: xce:Xcel_1487 hypothetical protein; PFAM: Protein of unknown function DUF797 YP_004542105.1 KEGG: cfl:Cfla_2001 20S proteasome A and B subunits; TIGRFAM: proteasome, beta subunit; PFAM: Proteasome, subunit alpha/beta YP_004542106.1 KEGG: xce:Xcel_1489 20S proteasome subunits A and B; TIGRFAM: proteasome, alpha subunit; PFAM: Proteasome, subunit alpha/beta YP_004542107.1 KEGG: xce:Xcel_1490 hypothetical protein; TIGRFAM: proteasome accessory factor PafA; PFAM: Protein of unknown function DUF245, C-terminal; Protein of unknown function DUF275, N-terminal YP_004542108.1 PFAM: peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: xce:Xcel_1491 peptidylprolyl isomerase FKBP-type YP_004542109.1 PFAM: histidine biosynthesis; TIGRFAM: histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: xce:Xcel_1492 imidazoleglycerol phosphate synthase, cyclase subunit YP_004542110.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1493 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542111.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1494 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542112.1 HAMAP: phosphoribosyl-AMP cyclohydrolase; KEGG: cfl:Cfla_1993 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004542113.1 TIGRFAM: Anthranilate synthase component I; KEGG: xce:Xcel_1496 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal YP_004542114.1 KEGG: cfl:Cfla_1990 hypothetical protein YP_004542115.1 KEGG: xce:Xcel_1499 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004542116.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: xce:Xcel_1500 tryptophan synthase subunit beta YP_004542117.1 PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: xce:Xcel_1501 tryptophan synthase subunit alpha YP_004542118.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: xce:Xcel_1502 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase YP_004542119.1 KEGG: xce:Xcel_1503 ferredoxin-dependent glutamate synthase; PFAM: glutamate synthase, central-C; glutamine amidotransferase, class-II; glutamate synthase, central-N; glutamate synthase, alpha subunit, C-terminal YP_004542120.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit 1; KEGG: xce:Xcel_1504 glutamate synthase, NADH/NADPH small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004542121.1 TIGRFAM: Pyruvate kinase; KEGG: ske:Sked_20690 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta YP_004542122.1 KEGG: xce:Xcel_1506 response regulator receiver and ANTAR domain-containing protein; PFAM: Signal transduction response regulator, receiver region; ANTAR; SMART: Signal transduction response regulator, receiver region YP_004542123.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1507 GCN5-related N-acetyltransferase YP_004542124.1 manually curated; TIGRFAM: phenylacetic acid degradation-related protein; KEGG: ske:Sked_20230 hypothetical protein; PFAM: Thioesterase superfamily YP_004542125.1 SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; manually curated; TIGRFAM: DNA polymerase 1; KEGG: xce:Xcel_1509 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain YP_004542126.1 PFAM: Methyltransferase type 11; KEGG: xce:Xcel_1513 type 11 methyltransferase YP_004542127.1 PFAM: ribosomal protein S1, RNA binding domain; KEGG: xce:Xcel_1515 RNA binding S1 domain-containing protein YP_004542128.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1518 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542129.1 TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: xce:Xcel_1520 dephospho-CoA kinase YP_004542130.1 TIGRFAM: peptidase C15, pyroglutamyl peptidase I; KEGG: cmi:CMM_0133 pyroglutamylpeptidase; PFAM: peptidase C15, pyroglutamyl peptidase I YP_004542131.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: xce:Xcel_1529 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein YP_004542132.1 KEGG: ske:Sked_06090 membrane protein TerC; TIGRFAM: integral membrane protein, TerC family; PFAM: Integral membrane protein TerC YP_004542133.1 KEGG: xce:Xcel_1534 integral membrane protein TerC; TIGRFAM: integral membrane protein, TerC family; PFAM: Integral membrane protein TerC YP_004542134.1 PFAM: YCII-related; KEGG: xce:Xcel_1540 YCII-like protein YP_004542135.1 KEGG: cfl:Cfla_1951 Zn-dependent hydrolase, glyoxylase YP_004542136.1 TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: xce:Xcel_1542 excinuclease ABC subunit A; PFAM: ABC transporter-like YP_004542137.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: ske:Sked_20080 regulator of disulfide bond formation YP_004542138.1 SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: xce:Xcel_1544 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif YP_004542139.1 HAMAP: ATPase, P-loop-containing; KEGG: xce:Xcel_1545 hypothetical protein YP_004542140.1 KEGG: xce:Xcel_1546 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_004542141.1 TIGRFAM: Sporulation regulator WhiA; HAMAP: sporulation transcription regulator whiA; KEGG: xce:Xcel_1547 hypothetical protein; PFAM: Sporulation regulator WhiA; Sporulation regulator WhiA, N-terminal YP_004542142.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: xce:Xcel_1548 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004542143.1 HAMAP: phosphoglycerate kinase; KEGG: bcv:Bcav_2170 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004542144.1 TIGRFAM: Triosephosphate isomerase; KEGG: xce:Xcel_1550 triosephosphate isomerase; PFAM: Triosephosphate isomerase YP_004542145.1 KEGG: xce:Xcel_1551 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004542146.1 KEGG: kra:Krad_2927 electron transport protein YP_004542147.1 KEGG: xce:Xcel_1553 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase YP_004542148.1 PFAM: Glucose-6-phosphate dehydrogenase subunit; KEGG: xce:Xcel_1554 glucose-6-phosphate dehydrogenase assembly protein OpcA-like protein YP_004542149.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: xce:Xcel_1555 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase YP_004542150.1 TIGRFAM: transaldolase subfamily; HAMAP: transaldolase; KEGG: xce:Xcel_1556 transaldolase; PFAM: transaldolase YP_004542151.1 TIGRFAM: transketolase, bacterial-like; KEGG: xce:Xcel_1557 transketolase; PFAM: transketolase, N-terminal; transketolase-like, pyrimidine-binding domain; transketolase, C-terminal YP_004542152.1 TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: xce:Xcel_1558 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004542153.1 TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: xce:Xcel_1560 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_004542154.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: xce:Xcel_1561 cobyrinic acid ac-diamide synthase YP_004542155.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: xce:Xcel_1562 chromosome segregation and condensation protein ScpA YP_004542156.1 KEGG: xce:Xcel_1563 chromosome segregation and condensation protein ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote YP_004542157.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: xce:Xcel_1564 pseudouridine synthase; SMART: RNA-binding S4 YP_004542158.1 TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: ske:Sked_19860 cytidylate kinase; PFAM: Cytidylate kinase region YP_004542159.1 SMART: ATPase, AAA+ type, core; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; KEGG: xce:Xcel_1565 cytidylate kinase; HAMAP: GTP-binding, EngA; PFAM: GTP-binding protein, HSR1-related YP_004542160.1 KEGG: cfl:Cfla_1923 hypothetical protein YP_004542161.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: ami:Amir_3982 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding YP_004542162.1 TIGRFAM: Lumazine-binding protein; KEGG: nca:Noca_2448 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004542163.1 TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: nca:Noca_2449 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II YP_004542164.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nca:Noca_2450 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_004542165.1 KEGG: bcv:Bcav_2748 hypothetical protein YP_004542166.1 KEGG: nda:Ndas_4329 integral membrane protein YP_004542167.1 PFAM: Protein of unknown function DUF326; KEGG: cfl:Cfla_0358 protein of unknown function DUF326 YP_004542168.1 KEGG: bcv:Bcav_0496 acylphosphatase; HAMAP: acylphosphatase; PFAM: acylphosphatase-like YP_004542169.1 KEGG: bcv:Bcav_1427 hypothetical protein YP_004542170.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: cfl:Cfla_1159 isoprenylcysteine carboxyl methyltransferase YP_004542171.1 KEGG: cfl:Cfla_1160 chalcone and stilbene synthase domain protein; PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal YP_004542172.1 PFAM: UbiA prenyltransferase; KEGG: cfl:Cfla_1161 UbiA prenyltransferase YP_004542173.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_2415 GCN5-related N-acetyltransferase YP_004542174.1 TIGRFAM: phosphomethylpyrimidine kinase type-2; KEGG: cmi:CMM_2116 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_004542175.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1806 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542176.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: xce:Xcel_1805 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542177.1 PFAM: Protein of unknown function DUF1222; KEGG: xce:Xcel_1804 hypothetical protein YP_004542178.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xce:Xcel_1796 LysR family transcriptional regulator YP_004542179.1 KEGG: xce:Xcel_1795 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal YP_004542180.1 KEGG: xce:Xcel_1794 UTP--glucose-1-phosphate uridylyltransferase; PFAM: UTP--glucose-1-phosphate uridylyltransferase YP_004542181.1 KEGG: xce:Xcel_1793 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal YP_004542182.1 KEGG: xce:Xcel_1792 hypothetical protein YP_004542183.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1790 GCN5-related N-acetyltransferase YP_004542184.1 PFAM: Ferritin/Dps protein; KEGG: cfl:Cfla_1904 ferritin Dps family protein YP_004542185.1 KEGG: xce:Xcel_1789 membrane protein, glycine-rich YP_004542186.1 KEGG: xce:Xcel_1787 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core YP_004542187.1 KEGG: xce:Xcel_1786 hypothetical protein YP_004542188.1 KEGG: xce:Xcel_1785 hypothetical protein YP_004542189.1 KEGG: xce:Xcel_1784 hypothetical protein YP_004542190.1 KEGG: xce:Xcel_1783 transcriptional regulator protein-like protein YP_004542191.1 KEGG: xce:Xcel_1782 transcriptional regulator protein-like protein YP_004542192.1 KEGG: xce:Xcel_1781 hypothetical protein YP_004542193.1 PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; KEGG: jde:Jden_1290 twin-arginine translocation protein, TatA/E family subunit YP_004542194.1 KEGG: xce:Xcel_1779 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase YP_004542195.1 KEGG: xce:Xcel_1778 diacylglycerol kinase catalytic subunit; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region YP_004542196.1 KEGG: xce:Xcel_1777 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DSH, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004542197.1 PFAM: Amidohydrolase 3; KEGG: xce:Xcel_1776 amidohydrolase 3 YP_004542198.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: xce:Xcel_1775 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004542199.1 KEGG: ske:Sked_18470 glycosyl transferase; PFAM: glycosyl transferase, family 2 YP_004542200.1 KEGG: xce:Xcel_1774 hypothetical protein YP_004542201.1 PFAM: Luciferase-like, subgroup; KEGG: xce:Xcel_1773 luciferase-like monooxygenase YP_004542202.1 PFAM: NADPH-dependent FMN reductase; KEGG: xce:Xcel_1772 NADPH-dependent FMN reductase YP_004542203.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: xce:Xcel_3082 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004542204.1 KEGG: xce:Xcel_1769 hypothetical protein YP_004542205.1 HAMAP: ribonuclease Z; KEGG: tbi:Tbis_1128 beta-lactamase domain-containing protein YP_004542206.1 TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: xce:Xcel_1771 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal YP_004542207.1 KEGG: cai:Caci_5540 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type, C-terminal; SMART: transcription regulator, AsnC-type YP_004542208.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aau:AAur_3393 acetyltransferase, GNAT family protein YP_004542209.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_1764 alpha/beta hydrolase fold protein YP_004542210.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: gob:Gobs_3813 alpha/beta hydrolase fold protein YP_004542211.1 KEGG: gob:Gobs_0116 multi-sensor signal transduction histidine kinase; PFAM: Sporulation stage II, protein E C-terminal; PAS fold-4; SMART: Protein phosphatase 2C-related YP_004542212.1 PFAM: Luciferase-like, subgroup; KEGG: nca:Noca_3005 luciferase family protein YP_004542213.1 PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; KEGG: stp:Strop_4451 MOSC domain-containing protein YP_004542214.1 PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: nca:Noca_2034 malate dehydrogenase YP_004542215.1 KEGG: gob:Gobs_1771 hypothetical protein YP_004542216.1 KEGG: bcv:Bcav_2072 hypothetical protein YP_004542217.1 PFAM: ABC transporter-like; KEGG: bcv:Bcav_2074 ABC transporter related YP_004542218.1 KEGG: aau:AAur_2012 endoribonuclease L-PSP family protein; manually curated; PFAM: Endoribonuclease L-PSP YP_004542219.1 KEGG: ske:Sked_36560 hypothetical protein YP_004542220.1 KEGG: gob:Gobs_3816 hypothetical protein YP_004542221.1 PFAM: Small multidrug resistance protein; KEGG: cfl:Cfla_0186 small multidrug resistance protein YP_004542222.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: xce:Xcel_1744 integrase family protein YP_004542223.1 KEGG: xce:Xcel_1743 phospholipase D/transphosphatidylase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_004542224.1 KEGG: xce:Xcel_1742 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_004542225.1 SMART: HTH transcriptional regulator, MerR; KEGG: xce:Xcel_1741 MerR family transcriptional regulator YP_004542226.1 PFAM: Protein of unknown function DUF151; KEGG: xce:Xcel_1740 hypothetical protein YP_004542227.1 KEGG: xce:Xcel_1739 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004542228.1 KEGG: xce:Xcel_1738 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated YP_004542229.1 PFAM: Protein of unknown function DUF881, bacterial; KEGG: xce:Xcel_1737 hypothetical protein YP_004542230.1 PFAM: Protein of unknown function DUF1290; KEGG: xce:Xcel_1736 hypothetical protein YP_004542231.1 PFAM: Protein of unknown function DUF881, bacterial; KEGG: xce:Xcel_1735 hypothetical protein YP_004542232.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: xce:Xcel_1734 CDP-alcohol phosphatidyltransferase YP_004542233.1 KEGG: xce:Xcel_1733 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004542234.1 PFAM: Protein of unknown function DUF2581; KEGG: xce:Xcel_1732 hypothetical protein YP_004542235.1 PFAM: ATP phosphoribosyltransferase, catalytic region; histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; histidine biosynthesis HisG, C-terminal; HAMAP: histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: ske:Sked_18190 ATP phosphoribosyltransferase YP_004542236.1 TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: phosphoribosyl-ATP pyrophosphatase; KEGG: art:Arth_1679 phosphoribosyl-ATP pyrophosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_004542238.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: xce:Xcel_1725 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase YP_004542239.1 KEGG: xce:Xcel_1724 hypothetical protein YP_004542240.1 KEGG: cfl:Cfla_3421 HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal YP_004542241.1 KEGG: cfl:Cfla_3420 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_004542242.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; KEGG: xce:Xcel_1723 Fmu (Sun) domain-containing protein YP_004542243.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: xce:Xcel_1722 methionyl-tRNA formyltransferase YP_004542244.1 KEGG: xce:Xcel_1720 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004542245.1 KEGG: xce:Xcel_1719 primosomal protein N' YP_004542246.1 PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: xce:Xcel_1718 S-adenosylmethionine synthetase YP_004542247.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: xce:Xcel_1717 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein YP_004542248.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: xce:Xcel_1716 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_004542249.1 manually curated; KEGG: xce:Xcel_1715 guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; TIGRFAM: Guanylate kinase, sub-group; PFAM: Guanylate kinase; HAMAP: Guanylate kinase, sub-group YP_004542250.1 KEGG: ske:Sked_18020 hypothetical protein YP_004542251.1 PFAM: Orotidine 5'-phosphate decarboxylase, core; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core; HAMAP: Orotidine 5'-phosphate decarboxylase; KEGG: xce:Xcel_1713 orotidine 5'-phosphate decarboxylase YP_004542252.1 TIGRFAM: carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: xce:Xcel_1712 carbamoyl-phosphate synthase large subunit; PFAM: carbamoyl phosphate synthetase, large subunit, ATP-binding; carbamoyl phosphate synthase, large subunit, N-terminal; carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like YP_004542253.1 TIGRFAM: carbamoyl phosphate synthase, small subunit; KEGG: xce:Xcel_1711 carbamoyl-phosphate synthase small subunit; PFAM: carbamoyl phosphate synthase, small subunit, N-terminal; glutamine amidotransferase class-I, C-terminal YP_004542254.1 KEGG: xce:Xcel_1710 hypothetical protein YP_004542255.1 KEGG: xce:Xcel_1709 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 1 YP_004542256.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: xce:Xcel_1708 aspartate carbamoyltransferase YP_004542257.1 HAMAP: Bifunctional protein pyrR; KEGG: xce:Xcel_1707 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004542258.1 TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: ske:Sked_17920 NusB antitermination factor; PFAM: NusB/RsmB/TIM44 YP_004542259.1 TIGRFAM: translation elongation factor P; HAMAP: translation elongation factor P; KEGG: xce:Xcel_1705 translation elongation factor P; PFAM: translation elongation factor, KOW-like; translation elongation factor P/YeiP, central; Elongation factor P, C-terminal YP_004542260.1 KEGG: xce:Xcel_1704 hypothetical protein YP_004542261.1 KEGG: xce:Xcel_1703 hypothetical protein YP_004542262.1 PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: xce:Xcel_1702 3-dehydroquinate dehydratase I YP_004542263.1 KEGG: sti:Sthe_1273 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like YP_004542264.1 KEGG: cwo:Cwoe_4748 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004542265.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_1700 major facilitator superfamily protein YP_004542266.1 KEGG: xce:Xcel_1698 alpha/beta hydrolase fold family protein YP_004542267.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: xce:Xcel_1697 glycerophosphoryl diester phosphodiesterase YP_004542268.1 PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: xce:Xcel_1695 3-dehydroquinate synthase YP_004542269.1 HAMAP: Shikimate kinase; KEGG: ske:Sked_17860 shikimate kinase; PFAM: Shikimate kinase YP_004542270.1 TIGRFAM: Chorismate synthase; KEGG: xce:Xcel_1694 chorismate synthase; PFAM: Chorismate synthase YP_004542271.1 PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; KEGG: xce:Xcel_1693 shikimate dehydrogenase substrate binding domain-containing protein YP_004542272.1 KEGG: xce:Xcel_1692 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like YP_004542273.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: xce:Xcel_1690 Holliday junction resolvase YqgF; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like YP_004542274.1 KEGG: xce:Xcel_1689 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; phosphoesterase, DHHA1 YP_004542275.1 KEGG: xce:Xcel_1688 hypothetical protein YP_004542276.1 KEGG: xce:Xcel_1687 hypothetical protein YP_004542277.1 TIGRFAM: ribosomal protein S4, bacterial-type; PFAM: RNA-binding S4; ribosomal protein S4; KEGG: xce:Xcel_1686 30S ribosomal protein S4; SMART: RNA-binding S4 YP_004542278.1 KEGG: bcv:Bcav_2158 hypothetical protein YP_004542279.1 KEGG: xce:Xcel_1685 AAA ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core YP_004542280.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_1683 GCN5-related N-acetyltransferase YP_004542281.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: xce:Xcel_1682 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain YP_004542282.1 KEGG: sma:SAV_4192 ATP/GTP-binding protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004542283.1 PFAM: Uncharacterised conserved protein UCP012608; KEGG: nca:Noca_4596 hypothetical protein YP_004542284.1 KEGG: amd:AMED_2699 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Hedgehog/intein hint, N-terminal; Hedgehog/intein hint domain, C-terminal YP_004542285.1 KEGG: nml:Namu_0549 glyoxalase/bleomycin resistance protein/dioxygenase YP_004542286.1 TIGRFAM: histidyl-tRNA synthetase, class IIa, subgroup; KEGG: xce:Xcel_1680 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding YP_004542287.1 KEGG: xce:Xcel_1679 beta-lactamase domain-containing protein YP_004542288.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: xce:Xcel_1678 type peptidyl-prolyl cis-trans isomerase cyclophilin YP_004542289.1 PFAM: Protein of unknown function DUF349; KEGG: xce:Xcel_1677 hypothetical protein YP_004542290.1 manually curated; KEGG: xce:Xcel_1676 hypothetical protein YP_004542291.1 KEGG: xce:Xcel_1675 DNA polymerase LigD, polymerase domain-containing protein; TIGRFAM: DNA polymerase LigD, polymerase domain; PFAM: DNA primase, small subunit YP_004542292.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: bcv:Bcav_0204 bifunctional deaminase-reductase domain protein YP_004542293.1 PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; KEGG: xce:Xcel_1674 ATP dependent DNA ligase YP_004542294.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: xce:Xcel_1673 (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT YP_004542295.1 PFAM: phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyl transferase; HAMAP: adenine phosphoribosyl transferase; KEGG: xce:Xcel_1672 adenine phosphoribosyltransferase YP_004542296.1 KEGG: xce:Xcel_1671 protein-export membrane protein SecF; TIGRFAM: SecF protein; PFAM: SecD/SecF/SecDF export membrane protein YP_004542297.1 TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; KEGG: xce:Xcel_1670 protein-export membrane protein SecD YP_004542298.1 KEGG: xce:Xcel_1669 preprotein translocase subunit YajC; TIGRFAM: YajC; PFAM: YajC YP_004542299.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: xce:Xcel_1668 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal YP_004542300.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: xce:Xcel_1667 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal YP_004542301.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: xce:Xcel_1666 crossover junction endodeoxyribonuclease RuvC YP_004542302.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: cfl:Cfla_1793 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28 YP_004542303.1 TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; HAMAP: glutamine amidotransferase subunit pdxT; KEGG: xce:Xcel_1664 SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase YP_004542304.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_1663 NUDIX hydrolase YP_004542305.1 TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: xce:Xcel_1662 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein YP_004542306.1 KEGG: xce:Xcel_1661 hypothetical protein YP_004542307.1 KEGG: xce:Xcel_1660 glycosyl transferase group 1 protein; PFAM: glycosyl transferase, group 1 YP_004542308.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: xce:Xcel_1659 lipid A biosynthesis acyltransferase YP_004542309.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: xce:Xcel_1658 CDP-alcohol phosphatidyltransferase YP_004542310.1 PFAM: histidine triad (HIT) protein; KEGG: xce:Xcel_1657 histidine triad (HIT) protein YP_004542311.1 KEGG: cfl:Cfla_1783 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding YP_004542312.1 KEGG: xce:Xcel_1655 hypothetical protein YP_004542313.1 KEGG: xce:Xcel_1652 hypothetical protein YP_004542314.1 PFAM: Uracil-DNA glycosylase-like; KEGG: xce:Xcel_1651 uracil-DNA glycosylase superfamily YP_004542315.1 PFAM: Protein of unknown function DUF664; KEGG: xce:Xcel_1650 hypothetical protein YP_004542316.1 KEGG: cfl:Cfla_0257 hypothetical protein YP_004542317.1 KEGG: bpf:BpOF4_09425 zinc carboxypeptidase; PFAM: peptidase M14, carboxypeptidase A; SMART: peptidase M14, carboxypeptidase A YP_004542318.1 PFAM: DoxX; KEGG: bcv:Bcav_3760 DoxX family protein YP_004542319.1 PFAM: YCII-related; KEGG: gbr:Gbro_4352 YCII-like protein YP_004542320.1 manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: gbr:Gbro_4353 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004542321.1 KEGG: mts:MTES_0672 thiamine pyrophosphate-requiring enzyme; PFAM: Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004542322.1 KEGG: aai:AARI_07080 MFS superfamily transporter; manually curated; PFAM: Major facilitator superfamily MFS-1 YP_004542323.1 KEGG: bcv:Bcav_0869 hypothetical protein; PFAM: Fumarylacetoacetase, C-terminal-like; ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YP_004542324.1 KEGG: art:Arth_3521 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004542325.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; KEGG: nfa:nfa27770 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004542326.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD; KEGG: mlu:Mlut_20010 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004542327.1 TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: nfa:nfa27750 hydratase; PFAM: Fumarylacetoacetase, C-terminal-like YP_004542328.1 KEGG: mts:MTES_0679 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_004542329.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: nfa:nfa49930 hypothetical protein YP_004542330.1 KEGG: aai:AARI_04300 metallophosphoesterase domain-containing protein YP_004542331.1 TIGRFAM: succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: bcv:Bcav_3564 fumarate reductase iron-sulfur subunit; PFAM: Ferredoxin YP_004542332.1 KEGG: bcv:Bcav_3565 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_004542333.1 KEGG: bcv:Bcav_3566 integral membrane protein YP_004542334.1 KEGG: xce:Xcel_2212 hypothetical protein YP_004542335.1 KEGG: ske:Sked_13130 anti-anti-sigma regulatory factor YP_004542336.1 SMART: Helix-turn-helix type 3; KEGG: bcv:Bcav_4120 helix-turn-helix domain protein YP_004542337.1 KEGG: rer:RER_53950 hypothetical protein YP_004542338.1 KEGG: nml:Namu_2834 phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase YP_004542339.1 KEGG: apn:Asphe3_21950 hypothetical protein YP_004542340.1 KEGG: rsa:RSal33209_3424 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004542341.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: har:HEAR2033 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; DSBA oxidoreductase YP_004542342.1 KEGG: sgr:SGR_555 hypothetical protein YP_004542343.1 KEGG: kfl:Kfla_3684 hypothetical protein YP_004542344.1 PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: mil:ML5_5582 oxidoreductase fad-binding domain protein YP_004542345.1 PFAM: Oxidoreductase, molybdopterin binding; KEGG: amd:AMED_1484 molybdopterin binding domain-containing oxidoreductase YP_004542346.1 KEGG: mts:MTES_0073 histidinol phosphatase; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal YP_004542348.1 KEGG: sro:Sros_2752 drug exporter of the RND superfamily-like protein YP_004542349.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_1606 light-dependent protochlorophyllide reductase YP_004542350.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sgr:SGR_4829 TetR family transcriptional regulator YP_004542352.1 KEGG: nca:Noca_4898 ATPase domain-containing protein; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004542353.1 KEGG: fri:FraEuI1c_6754 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004542354.1 KEGG: nfa:nfa20990 cation transporter; PFAM: Cation transporter YP_004542355.1 KEGG: bcv:Bcav_3779 osmosensitive K channel His kinase sensor; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004542356.1 KEGG: ske:Sked_27020 CheY-like receiver domain/winged-helix DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004542357.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ami:Amir_4873 TetR family transcriptional regulator YP_004542358.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aau:AAur_pTC20156 sugar transporter YP_004542359.1 KEGG: ske:Sked_35340 beta-glucosidase-like glycosyl hydrolase; PFAM: glycoside hydrolase, family 3, N-terminal; glycoside hydrolase, family 3, C-terminal YP_004542360.1 PFAM: Protein of unknown function DUF1593; KEGG: bfa:Bfae_00550 hypothetical protein YP_004542361.1 PFAM: Protein of unknown function DUF1593; Cadherin; KEGG: rbi:RB2501_13119 hypothetical protein YP_004542362.1 KEGG: kfl:Kfla_4566 PfkB domain-containing protein; PFAM: carbohydrate/purine kinase YP_004542363.1 PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_PF00037 ribose ABC transporter substrate-binding protein YP_004542364.1 PFAM: Bacterial inner-membrane translocator; KEGG: ypb:YPTS_2282 inner-membrane translocator YP_004542365.1 PFAM: ABC transporter-like; KEGG: bmi:BMEA_B0838 xylose import ATP-binding protein XylG; SMART: ATPase, AAA+ type, core YP_004542366.1 PFAM: Uncharacterised conserved protein UCP033535, periplasmic lipoprotein; KEGG: ret:RHE_PF00036 hypothetical protein YP_004542367.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sli:Slin_5802 inosine/uridine-preferring nucleoside hydrolase YP_004542368.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ara:Arad_9242 sugar ABC transporter YP_004542369.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_4750 binding-protein-dependent transport systems inner membrane component YP_004542370.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7002 ABC transporter, permease protein YP_004542371.1 KEGG: rcp:RCAP_rcc02653 glycerol kinase; PFAM: carbohydrate kinase, FGGY, N-terminal; carbohydrate kinase, FGGY, C-terminal YP_004542372.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: pwa:Pecwa_2644 xylose isomerase YP_004542373.1 KEGG: hel:HELO_3974 transketolase, subunit A; PFAM: transketolase, N-terminal YP_004542374.1 KEGG: fre:Franean1_0407 transketolase central region; PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal YP_004542375.1 PFAM: sugar-binding region; KEGG: fre:Franean1_0409 DeoR family transcriptional regulator YP_004542376.1 PFAM: transposase IS3/IS911; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein YP_004542377.1 PFAM: Integrase, catalytic core; KEGG: nca:Noca_4830 integrase catalytic subunit YP_004542378.1 PFAM: Integrase, catalytic core; KEGG: saq:Sare_4926 integrase catalytic region YP_004542379.1 KEGG: nml:Namu_3499 integrase YP_004542380.1 PFAM: Aminotransferase, class IV; KEGG: xce:Xcel_1875 class IV aminotransferase YP_004542381.1 KEGG: kfl:Kfla_1757 hypothetical protein YP_004542382.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: kfl:Kfla_1758 multicopper oxidase type 3 YP_004542383.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: cwo:Cwoe_4337 bifunctional deaminase-reductase domain protein YP_004542384.1 KEGG: xce:Xcel_1877 chorismate binding-like protein; PFAM: Chorismate binding, C-terminal YP_004542385.1 KEGG: gob:Gobs_4880 acyl carrier protein YP_004542386.1 PFAM: Protein of unknown function DUF2277; KEGG: xce:Xcel_1878 hypothetical protein YP_004542387.1 KEGG: xce:Xcel_1879 hypothetical protein YP_004542388.1 KEGG: xce:Xcel_1880 hypothetical protein YP_004542389.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: glycogen debranching enzyme GlgX; KEGG: cfl:Cfla_1743 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13, N-terminal; glycosyl hydrolase, family 13, catalytic region YP_004542390.1 KEGG: xce:Xcel_1882 hypothetical protein; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2 YP_004542391.1 PFAM: ATPase, AFG1-like; KEGG: xce:Xcel_1883 AFG1-family ATPase YP_004542392.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: xce:Xcel_1884 bifunctional deaminase-reductase domain-containing protein YP_004542393.1 KEGG: cfl:Cfla_1732 hypothetical protein YP_004542394.1 KEGG: xce:Xcel_1886 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004542395.1 KEGG: xce:Xcel_1887 ATP-grasp protein-like protein YP_004542396.1 KEGG: xce:Xcel_1888 hypothetical protein YP_004542397.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: xce:Xcel_1889 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding YP_004542398.1 KEGG: xce:Xcel_1890 hypothetical protein YP_004542399.1 KEGG: xce:Xcel_1891 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain YP_004542400.1 KEGG: xce:Xcel_1892 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase YP_004542401.1 KEGG: xce:Xcel_1893 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_004542402.1 TIGRFAM: carboxylate-amine ligase, predicted; HAMAP: carboxylate-amine ligase ybdK; KEGG: xce:Xcel_1896 glutamate--cysteine ligase GCS2; PFAM: glutamate--cysteine ligase, GCS2 YP_004542404.1 PFAM: Lipase, GDSL; KEGG: nca:Noca_3985 GDSL family lipase YP_004542405.1 PFAM: transketolase-like, pyrimidine-binding domain; transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: xce:Xcel_1898 deoxyxylulose-5-phosphate synthase YP_004542406.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase related 1; KEGG: xce:Xcel_1899 IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core YP_004542407.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_1901 NUDIX hydrolase YP_004542408.1 PFAM: Aminoglycoside phosphotransferase; KEGG: sro:Sros_5725 aminoglycoside phosphotransferase YP_004542409.1 manually curated; KEGG: xce:Xcel_1907 TetR family transcriptional regulator YP_004542410.1 KEGG: xce:Xcel_1908 hypothetical protein YP_004542411.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: sen:SACE_3000 sugar phosphate isomerase/epimerase YP_004542412.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: svi:Svir_21180 multicopper oxidase YP_004542413.1 KEGG: svi:Svir_21190 hypothetical protein; PFAM: Protein of unknown function DUF1080; PKD; Coagulation factor 5/8 type, C-terminal; SMART: PKD YP_004542414.1 KEGG: svi:Svir_21200 copper binding protein, plastocyanin/azurin family YP_004542415.1 TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: xce:Xcel_1909 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004542417.1 PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: xce:Xcel_1914 deoxyribonuclease/rho motif-related TRAM YP_004542418.1 PFAM: Amino acid permease-associated region; KEGG: xce:Xcel_1916 hypothetical protein YP_004542419.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: xce:Xcel_1917 TrkA-N domain-containing protein YP_004542420.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: xce:Xcel_1918 TrkA-N domain-containing protein YP_004542421.1 KEGG: xce:Xcel_1919 hypothetical protein YP_004542422.1 PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: xce:Xcel_1920 nucleic acid binding OB-fold tRNA/helicase-type YP_004542423.1 KEGG: xce:Xcel_1921 hypothetical protein YP_004542424.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: xce:Xcel_1922 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_004542425.1 KEGG: xce:Xcel_1923 hypothetical protein YP_004542426.1 KEGG: xce:Xcel_1924 hypothetical protein YP_004542427.1 KEGG: xce:Xcel_1925 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase YP_004542428.1 PFAM: Uncharacterised protein family UPF0126; KEGG: xce:Xcel_1926 hypothetical protein YP_004542429.1 KEGG: xce:Xcel_1927 hypothetical protein YP_004542430.1 HAMAP: Thymidine kinase, subgroup; KEGG: xce:Xcel_1929 thymidine kinase; PFAM: Thymidine kinase YP_004542431.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: xce:Xcel_1930 type I phosphodiesterase/nucleotide pyrophosphatase YP_004542432.1 KEGG: xce:Xcel_1931 hypothetical protein YP_004542433.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding; KEGG: xce:Xcel_1932 GCN5-related N-acetyltransferase YP_004542434.1 PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; KEGG: xce:Xcel_1934 DNA topoisomerase; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal YP_004542435.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: apn:Asphe3_00540 hydrolase or acyltransferase of alpha/beta superfamily YP_004542436.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV_6753 acetyltransferase YP_004542437.1 PFAM: YhhN-like; KEGG: req:REQ_22730 integral membrane protein YP_004542438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_1920 GCN5-related protein N-acetyltransferase YP_004542439.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: xce:Xcel_1940 methionine synthase; PFAM: Homocysteine S-methyltransferase; dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region YP_004542440.1 KEGG: gob:Gobs_1484 hypothetical protein YP_004542441.1 KEGG: xce:Xcel_1986 hypothetical protein YP_004542442.1 KEGG: xce:Xcel_1987 hypothetical protein YP_004542443.1 PFAM: DNA topoisomerase, type IIA, subunit B, C-terminal; DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; KEGG: xce:Xcel_1988 DNA topoisomerase; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like YP_004542444.1 KEGG: xce:Xcel_1989 hypothetical protein YP_004542445.1 PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: nml:Namu_2915 FAD linked oxidase domain-containing protein YP_004542446.1 KEGG: xce:Xcel_1991 RpoD subfamily RNA polymerase sigma-70 subunit; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4 YP_004542447.1 PFAM: UspA; KEGG: xce:Xcel_1992 UspA domain-containing protein YP_004542448.1 KEGG: xce:Xcel_1993 hypothetical protein YP_004542449.1 KEGG: xce:Xcel_1994 hypothetical protein YP_004542450.1 PFAM: Polyprenyl synthetase; KEGG: xce:Xcel_1995 polyprenyl synthetase YP_004542451.1 KEGG: xce:Xcel_1996 hypothetical protein YP_004542452.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA; KEGG: xce:Xcel_1997 serine/threonine protein kinase with PASTA sensor(s); SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; PASTA YP_004542453.1 TIGRFAM: DAHP synthetase, class II; KEGG: xce:Xcel_1998 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II YP_004542454.1 KEGG: cfl:Cfla_2066 phosphofructokinase; PFAM: phosphofructokinase YP_004542455.1 KEGG: xce:Xcel_2000 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004542456.1 KEGG: xce:Xcel_2001 hypothetical protein YP_004542457.1 TIGRFAM: Glucokinase ROK; KEGG: xce:Xcel_2002 ROK family glucokinase; PFAM: ROK YP_004542458.1 KEGG: xce:Xcel_2003 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase YP_004542459.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: xce:Xcel_2004 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal YP_004542460.1 PFAM: transcription regulator, AsnC-type, C-terminal; KEGG: xce:Xcel_2005 AsnC family transcriptional regulator YP_004542461.1 PFAM: glycosyl transferase, family 3; glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: xce:Xcel_2006 anthranilate phosphoribosyltransferase YP_004542462.1 SMART: Signal transduction response regulator, receiver region; KEGG: xce:Xcel_2007 response regulator receiver protein YP_004542463.1 KEGG: xce:Xcel_2008 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III YP_004542464.1 PFAM: Cytochrome c, class I; KEGG: xce:Xcel_2009 cytochrome c class I YP_004542465.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: xce:Xcel_2010 Rieske (2Fe-2S) domain-containing protein YP_004542466.1 PFAM: Cytochrome b/b6, N-terminal; KEGG: xce:Xcel_2011 cytochrome b/b6 domain-containing protein YP_004542467.1 PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: xce:Xcel_2012 superoxide dismutase YP_004542468.1 KEGG: xce:Xcel_2014 hypothetical protein YP_004542469.1 KEGG: cfl:Cfla_2081 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I YP_004542470.1 KEGG: xce:Xcel_2016 cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal YP_004542471.1 KEGG: ske:Sked_15620 cysteine desulfurase family protein; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004542472.1 PFAM: SirA-like; KEGG: ske:Sked_15610 regulator of disulfide bond formation YP_004542473.1 KEGG: cfl:Cfla_2084 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_004542474.1 KEGG: xce:Xcel_2018 hypothetical protein YP_004542475.1 PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: ske:Sked_15580 quinolinate synthetase A YP_004542476.1 PFAM: ThiJ/PfpI; KEGG: xce:Xcel_2019 ThiJ/PfpI domain-containing protein YP_004542477.1 PFAM: Thioesterase superfamily; KEGG: ske:Sked_15570 thioesterase YP_004542478.1 KEGG: xce:Xcel_2021 peptidase M20; PFAM: peptidase M20; peptidase M20, dimerisation YP_004542479.1 KEGG: xce:Xcel_2022 hypothetical protein YP_004542480.1 PFAM: Aldo/keto reductase; KEGG: ske:Sked_15540 aryl-alcohol dehydrogenase like protein YP_004542481.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lic:LIC12666 acetyltransferase YP_004542482.1 HAMAP: Arginine deiminase; KEGG: jde:Jden_0146 arginine deiminase; PFAM: Amidinotransferase YP_004542483.1 PFAM: Protein of unknown function DUF161; KEGG: xce:Xcel_2024 hypothetical protein YP_004542484.1 KEGG: cfl:Cfla_2093 transcriptional regulator, GntR family with aminotransferase domain; PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004542485.1 KEGG: xce:Xcel_2025 hypothetical protein YP_004542486.1 PFAM: dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: dihydroorotate dehydrogenase, class 2; HAMAP: dihydroorotate dehydrogenase; KEGG: xce:Xcel_2026 dihydroorotate dehydrogenase YP_004542487.1 KEGG: ske:Sked_15510 hypothetical protein YP_004542488.1 KEGG: xce:Xcel_2028 hypothetical protein YP_004542489.1 HAMAP: cytosol aminopeptidase; KEGG: xce:Xcel_2029 leucyl aminopeptidase; PFAM: peptidase M17, leucyl aminopeptidase, C-terminal; peptidase M17, leucyl aminopeptidase, N-terminal YP_004542490.1 PFAM: Methyltransferase type 11; KEGG: bcv:Bcav_1652 methyltransferase type 11 YP_004542491.1 KEGG: cfl:Cfla_2099 hypothetical protein YP_004542492.1 KEGG: xce:Xcel_2030 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_004542493.1 KEGG: xce:Xcel_2032 hypothetical protein YP_004542494.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: xce:Xcel_2033 oxidoreductase domain-containing protein YP_004542495.1 PFAM: Domain of unknown function DUF1994; KEGG: xce:Xcel_0136 Excalibur domain-containing protein YP_004542496.1 PFAM: MMPL; KEGG: ske:Sked_15430 RND superfamily drug exporter YP_004542497.1 PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: xce:Xcel_2034 lipoate-protein ligase B YP_004542498.1 KEGG: cfl:Cfla_2109 lipoic acid synthetase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB YP_004542499.1 KEGG: xce:Xcel_2036 hypothetical protein YP_004542500.1 KEGG: gob:Gobs_3984 bifunctional deaminase-reductase domain-containing protein YP_004542502.1 PFAM: RDD; KEGG: xce:Xcel_2037 RDD domain containing protein YP_004542503.1 TIGRFAM: glutamine synthetase type I; KEGG: xce:Xcel_2038 glutamine synthetase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp YP_004542504.1 PFAM: Protein of unknown function DUF808; KEGG: mjl:Mjls_2697 hypothetical protein YP_004542505.1 HAMAP: glutamate-ammonia-ligase adenylyltransferase; KEGG: xce:Xcel_2046 glutamate-ammonia ligase adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/glutamine-synthetase adenylyltransferase YP_004542506.1 TIGRFAM: glutamine synthetase type I; KEGG: xce:Xcel_2047 glutamine synthetase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp YP_004542507.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: cfl:Cfla_2120 3-methyl-2-oxobutanoatehydroxymethyltransferase YP_004542508.1 KEGG: xce:Xcel_2048 hypothetical protein YP_004542509.1 KEGG: xce:Xcel_2049 ROK family protein; PFAM: ROK YP_004542510.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: xce:Xcel_2050 anti-sigma-factor antagonist YP_004542511.1 KEGG: cfl:Cfla_3227 small GTP-binding protein; TIGRFAM: Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; translation elongation factor EFG/EF2, domain IV; translation elongation factor EFG/EF2, C-terminal YP_004542512.1 manually curated; KEGG: krh:KRH_06000 hypothetical protein YP_004542513.1 PFAM: CopG-like DNA-binding; KEGG: cms:CMS_0074 DNA-binding protein YP_004542514.1 PFAM: PemK-like protein; KEGG: mbt:JTY_2003 hypothetical protein YP_004542515.1 PFAM: Protein of unknown function DUF328; KEGG: xce:Xcel_2082 hypothetical protein YP_004542516.1 KEGG: jan:Jann_0359 hypothetical protein YP_004542517.1 PFAM: phosphoglycerate mutase; ribonuclease H; KEGG: xce:Xcel_2083 phosphoglycerate mutase YP_004542518.1 PFAM: Protein of unknown function DUF164; KEGG: xce:Xcel_2084 hypothetical protein YP_004542519.1 KEGG: xce:Xcel_2085 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3 YP_004542520.1 KEGG: tbi:Tbis_1616 CBS domain-containing signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004542521.1 KEGG: tcu:Tcur_2094 sugar transporter; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter YP_004542522.1 KEGG: xce:Xcel_2087 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family A, palm domain; SMART: DNA-directed DNA polymerase, family A, palm domain YP_004542523.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kra:Krad_0220 GCN5-related N-acetyltransferase YP_004542524.1 KEGG: ica:Intca_1464 transcriptional regulator, LuxR family; PFAM: transcription regulator LuxR, C-terminal; SMART: transcription regulator LuxR, C-terminal YP_004542525.1 KEGG: bgf:BC1003_0583 hypothetical protein YP_004542526.1 PFAM: SNARE associated Golgi protein; KEGG: krh:KRH_22460 hypothetical protein YP_004542527.1 KEGG: amd:AMED_4173 GntR family transcriptional regulator fused with aminotransferase; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR YP_004542528.1 KEGG: bcv:Bcav_0430 hypothetical protein YP_004542529.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: bcv:Bcav_3841 bifunctional deaminase-reductase domain protein YP_004542530.1 KEGG: bcv:Bcav_0070 hypothetical protein YP_004542531.1 KEGG: art:Arth_3898 chromosome segregation ATPases-like protein YP_004542532.1 KEGG: nda:Ndas_2323 hypothetical protein YP_004542533.1 KEGG: sgr:SGR_369 hypothetical protein YP_004542534.1 KEGG: sna:Snas_1705 hypothetical protein YP_004542535.1 KEGG: bld:BLi03038 hypothetical protein; PFAM: Alkaline phosphatase D-related YP_004542536.1 KEGG: rop:ROP_23870 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004542537.1 KEGG: apn:Asphe3_34920 dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase YP_004542538.1 PFAM: Natural resistance-associated macrophage protein; KEGG: ach:Achl_3378 natural resistance-associated macrophage protein YP_004542539.1 KEGG: xce:Xcel_0205 hypothetical protein YP_004542540.1 KEGG: kfl:Kfla_2837 glycosyl hydrolase family 98 carbohydrate binding module; PFAM: glycoside hydrolase 97; glycosyl hydrolase family 98, carbohydrate-binding module; SMART: glycosyl hydrolase family 98, carbohydrate-binding module YP_004542541.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mil:ML5_4105 binding-protein-dependent transport systems inner membrane component YP_004542542.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165; KEGG: kse:Ksed_23490 transposase family protein YP_004542543.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mts:MTES_2846 sugar ABC transporter periplasmic protein YP_004542544.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: xce:Xcel_2130 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004542545.1 KEGG: xce:Xcel_2131 hypothetical protein YP_004542546.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: xce:Xcel_2132 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: transketolase, N-terminal YP_004542547.1 KEGG: ske:Sked_14130 hypothetical protein YP_004542548.1 KEGG: xce:Xcel_2134 PucR family transcriptional regulator YP_004542549.1 KEGG: xce:Xcel_2135 ACP S-malonyltransferase YP_004542550.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: ske:Sked_14100 3-oxoacyl-ACP synthase III YP_004542551.1 KEGG: xce:Xcel_2137 phosphopantetheine-binding protein; HAMAP: acyl carrier protein (ACP); PFAM: phosphopantetheine-binding YP_004542552.1 KEGG: xce:Xcel_2138 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_004542553.1 KEGG: ske:Sked_33430 Ig-like domain-containing protein; TIGRFAM: LPXTG-motif cell wall anchor; PFAM: Alpha-2-macroglobulin, N-terminal YP_004542554.1 KEGG: rsa:RSal33209_2883 hypothetical protein YP_004542555.1 SMART: HTTM; KEGG: rsa:RSal33209_2884 hypothetical protein YP_004542556.1 KEGG: xce:Xcel_2142 hypothetical protein YP_004542557.1 TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: xce:Xcel_2143 peptide deformylase; PFAM: Formylmethionine deformylase YP_004542559.1 KEGG: xce:Xcel_2146 hypothetical protein YP_004542560.1 KEGG: xce:Xcel_1085 hypothetical protein YP_004542561.1 KEGG: mts:MTES_0650 transcriptional regulator; PFAM: transcriptional regulator IclR, N-terminal; SMART: transcriptional regulator IclR, N-terminal YP_004542562.1 PFAM: phenol hydroxylase, C-terminal dimerisation; Monooxygenase, FAD-binding; KEGG: nfa:nfa27810 phenol 2-monooxygenase YP_004542563.1 KEGG: mts:MTES_0648 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004542564.1 KEGG: kfl:Kfla_0707 hypothetical protein YP_004542565.1 PFAM: Protein of unknown function DUF305; KEGG: bcv:Bcav_0885 protein of unknown function DUF305 YP_004542567.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2150 major facilitator superfamily protein YP_004542568.1 KEGG: xce:Xcel_2156 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain YP_004542569.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: xce:Xcel_2157 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain YP_004542570.1 PFAM: DoxX; KEGG: rha:RHA1_ro05666 hypothetical protein YP_004542571.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: nca:Noca_2052 NADP oxidoreductase, coenzyme F420-dependent YP_004542572.1 KEGG: apn:Asphe3_39790 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004542573.1 KEGG: stp:Strop_3165 hypothetical protein; PFAM: Lipase, GDSL YP_004542574.1 KEGG: xce:Xcel_2159 alpha amylase catalytic subunit; PFAM: glycosyl hydrolase, family 13, catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004542575.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1783 binding-protein-dependent transport systems inner membrane component YP_004542576.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1782 fructose-bisphosphate aldolase YP_004542577.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: cfl:Cfla_2174 extracellular solute-binding protein family 1 YP_004542578.1 KEGG: jde:Jden_1528 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004542579.1 KEGG: ske:Sked_13840 glycosidase; PFAM: glycosyl hydrolase, family 13, catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004542580.1 KEGG: kra:Krad_4241 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase YP_004542581.1 KEGG: kfl:Kfla_5816 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004542582.1 KEGG: xce:Xcel_2165 TIM-barrel protein, nifR3 family; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase YP_004542583.1 KEGG: svi:Svir_21700 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter YP_004542584.1 KEGG: mva:Mvan_1643 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase YP_004542585.1 PFAM: Protein of unknown function DUF1338; KEGG: rha:RHA1_ro00341 hypothetical protein YP_004542586.1 PFAM: FAD dependent oxidoreductase; KEGG: sen:SACE_3881 sarcosine oxidase subunit beta YP_004542587.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rop:ROP_04850 LysR family transcriptional regulator YP_004542588.1 KEGG: cfl:Cfla_1319 hypothetical protein YP_004542589.1 KEGG: xce:Xcel_2167 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase, alpha2 dimer; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding YP_004542590.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: cfl:Cfla_2183 periplasmic solute binding protein YP_004542591.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_2169 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542592.1 PFAM: ABC-3; KEGG: xce:Xcel_2170 ABC-3 protein YP_004542593.1 PFAM: Ferric-uptake regulator; KEGG: xce:Xcel_2171 Fur family ferric uptake regulator YP_004542594.1 PFAM: SNARE associated Golgi protein; KEGG: bcv:Bcav_1771 membrane-associated protein YP_004542595.1 PFAM: Bacterial transport system permease protein; KEGG: xce:Xcel_2172 transport system permease protein YP_004542596.1 PFAM: Bacterial transport system permease protein; KEGG: xce:Xcel_2173 transport system permease protein YP_004542597.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_2174 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542598.1 PFAM: Periplasmic binding protein; KEGG: xce:Xcel_2175 periplasmic binding protein YP_004542599.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: UDP pyrophosphate synthase; KEGG: xce:Xcel_2176 UDP diphosphate synthase YP_004542600.1 TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO; KEGG: xce:Xcel_2177 DNA repair protein RecO; PFAM: Recombination protein O, RecO YP_004542601.1 PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: Yeast 2-isopropylmalate synthase; HAMAP: 2-isopropylmalate synthase; KEGG: xce:Xcel_2182 2-isopropylmalate synthase YP_004542602.1 KEGG: xce:Xcel_2183 hypothetical protein YP_004542603.1 PFAM: Dienelactone hydrolase; KEGG: xce:Xcel_2184 hypothetical protein YP_004542604.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: xce:Xcel_2185 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2 YP_004542605.1 KEGG: xce:Xcel_2186 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Protein of unknown function DUF21; transporter-associated region; SMART: Cystathionine beta-synthase, core YP_004542606.1 TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: ske:Sked_13480 hypothetical protein; PFAM: Uncharacterised protein family UPF0054 YP_004542607.1 KEGG: xce:Xcel_2188 PhoH family protein; manually curated; PFAM: PhoH-like protein YP_004542608.1 PFAM: histidine triad (HIT) protein; KEGG: xce:Xcel_2189 histidine triad (HIT) protein YP_004542609.1 KEGG: xce:Xcel_2190 hypothetical protein; TIGRFAM: ribosomal RNA small subunit methyltransferase E; PFAM: ribosomal RNA small subunit methyltransferase E YP_004542610.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: xce:Xcel_2191 chaperone DnaJ domain-containing protein; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region YP_004542611.1 TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: xce:Xcel_2192 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; HTH transcriptional regulator, DeoR N-terminal YP_004542613.1 KEGG: xce:Xcel_2194 LuxR family transcriptional regulator YP_004542615.1 KEGG: xce:Xcel_2196 hypothetical protein YP_004542616.1 KEGG: rha:RHA1_ro04176 proline rich protein YP_004542617.1 KEGG: xce:Xcel_2198 hypothetical protein YP_004542618.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: xce:Xcel_2199 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004542619.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: xce:Xcel_2200 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; translation elongation factor EFTu/EF1A, domain 2; translation elongation factor EFG/EF2, C-terminal YP_004542620.1 KEGG: cfl:Cfla_0228 intracellular protease, PfpI family; TIGRFAM: peptidase C56, PfpI; PFAM: ThiJ/PfpI YP_004542621.1 KEGG: cfl:Cfla_2217 protein of unknown function DUF1503; TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; PFAM: Protein of unknown function DUF1503 YP_004542622.1 KEGG: xce:Xcel_2206 hypothetical protein YP_004542623.1 TIGRFAM: ribosomal protein S20; HAMAP: ribosomal protein S20; KEGG: xce:Xcel_2207 30S ribosomal protein S20; PFAM: ribosomal protein S20 YP_004542624.1 KEGG: xce:Xcel_2208 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta YP_004542625.1 KEGG: xce:Xcel_2210 ComEC/Rec2-like protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004542626.1 KEGG: xce:Xcel_2211 competence protein ComEA helix-hairpin-helix repeat-containing protein; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding motif, class 1 YP_004542627.1 KEGG: xce:Xcel_2216 DegV family protein; TIGRFAM: DegV; PFAM: DegV YP_004542628.1 KEGG: xce:Xcel_2219 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35 YP_004542629.1 KEGG: xce:Xcel_2220 hypothetical protein YP_004542630.1 KEGG: cfl:Cfla_2030 hypothetical protein YP_004542631.1 KEGG: xce:Xcel_2222 hypothetical protein YP_004542632.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: xce:Xcel_2223 leucyl-tRNA synthetase YP_004542633.1 KEGG: ske:Sked_13240 hypothetical protein; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase YP_004542634.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2225 major facilitator superfamily protein YP_004542635.1 KEGG: ske:Sked_13220 Mn-dependent transcriptional regulator; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor YP_004542636.1 PFAM: Metallophosphoesterase; KEGG: xce:Xcel_2227 metallophosphoesterase YP_004542637.1 SMART: DNA helicase, ATP-dependent, Ku type; TIGRFAM: Ku, prokaryotic type; KEGG: xce:Xcel_2229 Ku protein; HAMAP: DNA repair protein; PFAM: DNA helicase, ATP-dependent, Ku type YP_004542638.1 KEGG: xce:Xcel_3096 transferase hexapeptide protein YP_004542639.1 KEGG: apn:Asphe3_12530 hypothetical protein YP_004542640.1 PFAM: glutaredoxin; KEGG: mlu:Mlut_22520 glutaredoxin-like protein YP_004542641.1 KEGG: xce:Xcel_2233 DNA polymerase LigD, polymerase domain-containing protein; TIGRFAM: DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, ligase region; PFAM: ATP dependent DNA ligase, central; DNA primase, small subunit; ATP dependent DNA ligase, C-terminal YP_004542642.1 PFAM: peptidase M24, structural domain; KEGG: xce:Xcel_2238 peptidase M24 YP_004542643.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nca:Noca_4501 NAD-dependent epimerase/dehydratase YP_004542644.1 KEGG: xce:Xcel_2416 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004542645.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sro:Sros_8955 GCN5-related N-acetyltransferase YP_004542646.1 KEGG: nca:Noca_0914 hypothetical protein YP_004542647.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gob:Gobs_2224 phosphinothricin acetyltransferase YP_004542649.1 KEGG: ske:Sked_28380 pyridoxamine-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YP_004542650.1 TIGRFAM: Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: aau:AAur_1639 hypothetical protein YP_004542651.1 PFAM: Malate:quinone-oxidoreductase; TIGRFAM: Malate:quinone-oxidoreductase; KEGG: xce:Xcel_2241 malate/quinone oxidoreductase; HAMAP: Malate:quinone-oxidoreductase YP_004542652.1 KEGG: kfl:Kfla_1416 hypothetical protein YP_004542653.1 KEGG: bbt:BBta_7516 alkanal monooxygenase; TIGRFAM: oxidoreductase, LLM family; PFAM: Luciferase-like, subgroup YP_004542654.1 KEGG: gob:Gobs_3881 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal YP_004542655.1 KEGG: cfl:Cfla_0904 NAD(P)(+) transhydrogenase (AB-specific); PFAM: NAD(P) transhydrogenase, beta subunit YP_004542656.1 KEGG: ske:Sked_07820 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal YP_004542657.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose synthase; KEGG: bcv:Bcav_1972 maltooligosyl trehalose synthase; PFAM: glycosyl hydrolase, family 13, catalytic region YP_004542658.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: bcv:Bcav_1971 malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13, N-terminal; glycosyl hydrolase, family 13, catalytic region YP_004542659.1 PFAM: Formate/nitrite transporter; KEGG: cfl:Cfla_2879 formate/nitrite transporter YP_004542660.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cmi:CMM_1102 efflux MFS permease YP_004542661.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tpr:Tpau_0439 transcriptional regulator, TetR family YP_004542662.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: mil:ML5_1542 regulatory protein TetR YP_004542665.1 PFAM: Mannonate dehydratase; TIGRFAM: Mannonate dehydratase; HAMAP: Mannonate dehydratase; KEGG: xce:Xcel_2667 mannonate dehydratase YP_004542666.1 PFAM: Polyketide cyclase/dehydrase; KEGG: nfa:nfa2750 hypothetical protein YP_004542667.1 PFAM: glutamate--cysteine ligase, GCS2; manually curated; TIGRFAM: carboxylate-amine ligase, predicted; KEGG: cef:CE2886 carboxylate-amine ligase; HAMAP: carboxylate-amine ligase ybdK YP_004542668.1 PFAM: Beta-lactamase-related; KEGG: bcv:Bcav_1551 beta-lactamase YP_004542669.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS YP_004542671.1 KEGG: gob:Gobs_4946 hypothetical protein YP_004542672.1 KEGG: art:Arth_3233 hypothetical protein YP_004542673.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: tbi:Tbis_3284 monooxygenase FAD-binding protein YP_004542674.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165; KEGG: kse:Ksed_23490 transposase family protein YP_004542675.1 PFAM: Integrase, catalytic core; KEGG: msp:Mspyr1_46420 transposase YP_004542676.1 PFAM: transposase IS3/IS911; KEGG: gob:Gobs_2596 transposase IS3/IS911 family protein YP_004542677.1 KEGG: stp:Strop_2355 hypothetical protein YP_004542678.1 KEGG: cai:Caci_1482 hypothetical protein YP_004542679.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: nfa:nfa34180 translocator YP_004542680.1 manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: mlo:mll4834 transcriptional regulator; SMART: HTH transcriptional regulator, MarR YP_004542681.1 KEGG: kse:Ksed_23490 transposase family protein; manually curated; PFAM: transposase, IS204/IS1001/IS1096/IS1165 YP_004542682.1 PFAM: phosphoglycerate mutase; KEGG: ske:Sked_11490 fructose-2,6-bisphosphatase YP_004542683.1 KEGG: ske:Sked_11480 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein YP_004542684.1 KEGG: xce:Xcel_2251 hypothetical protein YP_004542685.1 PFAM: Cytidylyltransferase; Nicotinamide mononucleotide adenylyltransferase, C-terminal; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: xce:Xcel_2252 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_004542687.1 PFAM: Aldehyde dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase GPR; HAMAP: glutamate-5-semialdehyde dehydrogenase; KEGG: cfl:Cfla_2279 gamma-glutamyl phosphate reductase YP_004542688.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2255 major facilitator superfamily protein YP_004542689.1 KEGG: xce:Xcel_2256 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: glutamate 5-kinase, ProB-related; HAMAP: glutamate 5-kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase YP_004542690.1 TIGRFAM: GTP-binding protein Obg/CgtA; GTP-binding protein GTP1/OBG, C-terminal; HAMAP: GTPase obg; KEGG: xce:Xcel_2258 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTP-binding protein GTP1/OBG, C-terminal YP_004542691.1 TIGRFAM: ribosomal protein L27; HAMAP: ribosomal protein L27; KEGG: cfl:Cfla_2282 ribosomal protein L27; PFAM: ribosomal protein L27 YP_004542692.1 TIGRFAM: ribosomal protein L21; HAMAP: ribosomal protein L21; KEGG: xce:Xcel_2260 50S ribosomal protein L21; PFAM: ribosomal protein L21 YP_004542693.1 KEGG: xce:Xcel_2261 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter YP_004542694.1 PFAM: Dodecin flavoprotein; KEGG: bcv:Bcav_1621 protein of unknown function DUF1458 YP_004542695.1 KEGG: xce:Xcel_2263 protein-L-isoaspartate(D-aspartate)O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004542696.1 PFAM: Fatty acid desaturase, type 1; KEGG: xce:Xcel_2789 fatty acid desaturase YP_004542698.1 HAMAP: Thymidine kinase, subgroup; KEGG: xce:Xcel_2265 thymidine kinase; PFAM: Thymidine kinase YP_004542699.1 KEGG: xce:Xcel_2266 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease E/G; PFAM: RNA-binding protein AU-1/ribonuclease E/G YP_004542700.1 PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: xce:Xcel_2267 cytochrome bd ubiquinol oxidase subunit I YP_004542701.1 KEGG: xce:Xcel_2268 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II YP_004542702.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: xce:Xcel_2269 cysteine ABC transporterppermease/ATP-binding protein CydD; PFAM: ABC transporter-like; ABC transporter, transmembrane region YP_004542703.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: xce:Xcel_2270 cysteine ABC transporterppermease/ATP-binding protein CydC; PFAM: ABC transporter-like YP_004542704.1 KEGG: afo:Afer_1621 prevent-host-death family protein; manually curated; TIGRFAM: Prevent-host-death protein YP_004542705.1 KEGG: afo:Afer_1620 PilT protein domain protein YP_004542706.1 PFAM: FAD dependent oxidoreductase; KEGG: sro:Sros_6398 amine oxidase YP_004542707.1 KEGG: xce:Xcel_2271 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004542709.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: xce:Xcel_2272 formamidopyrimidine-DNA glycosylase YP_004542710.1 KEGG: xce:Xcel_2273 ribonuclease III; PFAM: ribonuclease III; Double-stranded RNA binding; TIGRFAM: ribonuclease III, bacterial; HAMAP: ribonuclease III, bacterial; SMART: ribonuclease III; Double-stranded RNA binding YP_004542711.1 TIGRFAM: ribosomal protein L32p; HAMAP: ribosomal protein L32p; KEGG: xce:Xcel_2274 50S ribosomal protein L32; PFAM: ribosomal protein L32p YP_004542712.1 KEGG: xce:Xcel_2275 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF177 YP_004542713.1 KEGG: xce:Xcel_2276 hypothetical protein YP_004542714.1 PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: xce:Xcel_2277 pantetheine-phosphate adenylyltransferase YP_004542715.1 KEGG: xce:Xcel_2278 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase YP_004542716.1 KEGG: xce:Xcel_2279 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004542717.1 PFAM: Dak phosphatase; KEGG: xce:Xcel_2280 Dak phosphatase YP_004542718.1 TIGRFAM: ribosomal protein L28; HAMAP: ribosomal protein L28; KEGG: xce:Xcel_2281 50S ribosomal protein L28; PFAM: ribosomal protein L28 YP_004542719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_2282 GCN5-related N-acetyltransferase YP_004542720.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: xce:Xcel_2283 thiamine-monophosphate kinase; PFAM: AIR synthase related protein YP_004542721.1 KEGG: xce:Xcel_2284 hypothetical protein YP_004542722.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_3394 glyoxalase/bleomycin resistance protein/dioxygenase YP_004542723.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: xce:Xcel_2285 D-alanine/D-alanine ligase YP_004542724.1 PFAM: acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: xce:Xcel_2286 acyl-CoA dehydrogenase type 2 domain-containing protein YP_004542725.1 KEGG: xce:Xcel_2290 Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004542726.1 KEGG: xce:Xcel_2291 hypothetical protein YP_004542727.1 KEGG: ske:Sked_11140 glycerol-3-phosphate dehydrogenase; HAMAP: glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal YP_004542728.1 KEGG: xce:Xcel_2293 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004542729.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: xce:Xcel_2294 UDP-N-acetylglucosamine1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core YP_004542731.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2295 major facilitator superfamily protein YP_004542732.1 KEGG: aau:AAur_0567 hypothetical protein YP_004542733.1 PFAM: NERD; KEGG: nca:Noca_3808 hypothetical protein YP_004542734.1 KEGG: cfl:Cfla_3237 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004542735.1 PFAM: peptidase S1/S6, chymotrypsin/Hap; Colicin V production protein; KEGG: mts:MTES_3063 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain YP_004542736.1 KEGG: jde:Jden_0744 PfkB domain protein; PFAM: carbohydrate/purine kinase YP_004542737.1 KEGG: cfl:Cfla_3401 glycosyl hydrolase family 32 domain protein; PFAM: glycosyl hydrolases family 32, N-terminal; glycosyl hydrolase family 32, C-terminal; SMART: glycoside hydrolase, family 32 YP_004542738.1 PFAM: ABC transporter-like; KEGG: cms:CMS_2949 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004542739.1 PFAM: Bacterial inner-membrane translocator; KEGG: cms:CMS_2950 sugar transport integral membrane protein YP_004542740.1 PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: cms:CMS_2951 substrate-binding transport lipoprotein YP_004542741.1 KEGG: cmi:CMM_2841 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004542742.1 KEGG: ppm:PPSC2_c2714 cycloinulo-oligosaccharide fructanotransferase; PFAM: glycosyl hydrolases family 32, N-terminal; glycosyl hydrolase family 32, C-terminal; SMART: glycoside hydrolase, family 32; LamG-like jellyroll fold YP_004542743.1 KEGG: bcv:Bcav_1099 fructokinase; PFAM: carbohydrate/purine kinase YP_004542744.1 PFAM: glycosyl hydrolases family 32, N-terminal; glycosyl hydrolase family 32, C-terminal; KEGG: art:Arth_0425 levanase; SMART: glycoside hydrolase, family 32 YP_004542745.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: art:Arth_0426 extracellular solute-binding protein YP_004542746.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0427 binding-protein-dependent transport systems inner membrane component YP_004542747.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_17870 ABC-type polysaccharide transporter permease YP_004542748.1 KEGG: art:Arth_0429 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004542749.1 KEGG: rha:RHA1_ro02773 flavodoxin (beta-lactamase-like) YP_004542750.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rxy:Rxyl_3190 TetR family transcriptional regulator YP_004542751.1 KEGG: cle:Clole_0688 pectate lyase/Amb allergen YP_004542753.1 TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: xce:Xcel_2352 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_004542754.1 PFAM: Protein of unknown function DUF1697; KEGG: nfa:nfa42860 hypothetical protein YP_004542755.1 PFAM: Luciferase-like, subgroup; KEGG: bcv:Bcav_1583 luciferase family protein YP_004542756.1 PFAM: Methyltransferase type 12; KEGG: nda:Ndas_3485 methyltransferase type 11 YP_004542757.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: xce:Xcel_2356 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_004542758.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: xce:Xcel_2357 3-isopropylmalate dehydratase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_004542759.1 KEGG: xce:Xcel_2358 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR, C-terminal; transcriptional regulator IclR, N-terminal; SMART: transcriptional regulator IclR, N-terminal YP_004542760.1 KEGG: xce:Xcel_2359 hypothetical protein YP_004542761.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: xce:Xcel_2360 membrane-flanked domain-containing protein YP_004542762.1 KEGG: xce:Xcel_2362 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_004542763.1 KEGG: xce:Xcel_2363 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004542764.1 KEGG: xce:Xcel_2366 5-carboxymethyl-2-hydroxymuconateDelta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; Domain of unknown function DUF2437 YP_004542765.1 KEGG: xce:Xcel_2367 type 11 methyltransferase; manually curated; PFAM: Methyltransferase type 11 YP_004542766.1 KEGG: xce:Xcel_2368 hypothetical protein YP_004542767.1 KEGG: nca:Noca_2310 PhzF family phenazine biosynthesis protein; TIGRFAM: phenazine biosynthesis PhzC/PhzF protein; PFAM: phenazine biosynthesis PhzC/PhzF protein YP_004542768.1 PFAM: Aldo/keto reductase; KEGG: art:Arth_1649 aldo/keto reductase YP_004542769.1 KEGG: xce:Xcel_2372 hypothetical protein YP_004542770.1 KEGG: cai:Caci_5538 hypothetical protein YP_004542771.1 PFAM: Protein of unknown function DUF1470; KEGG: gbr:Gbro_3999 hypothetical protein YP_004542772.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: nca:Noca_1792 hypothetical protein YP_004542774.1 KEGG: xce:Xcel_2373 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004542775.1 KEGG: ach:Achl_0563 hypothetical protein YP_004542776.1 PFAM: Protein of unknown function DUF81; KEGG: xce:Xcel_2375 hypothetical protein YP_004542777.1 manually curated; TIGRFAM: Conserved hypothetical protein CHP00011; KEGG: xce:Xcel_2376 YbaK/EbsC protein; PFAM: YbaK/aminoacyl-tRNA synthetase associated region YP_004542778.1 PFAM: Protein of unknown function DUF307; KEGG: cfl:Cfla_1180 protein of unknown function DUF307 YP_004542779.1 KEGG: xce:Xcel_2378 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal YP_004542780.1 PFAM: Biotin/lipoate A/B protein ligase; KEGG: xce:Xcel_2379 biotin/lipoate A/B protein ligase YP_004542781.1 PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: amd:AMED_8811 RpiR family transcriptional regulator YP_004542782.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; KEGG: cfl:Cfla_1170 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase YP_004542783.1 KEGG: ske:Sked_16990 signal transduction histidine kinase; PFAM: transcription regulator LuxR, C-terminal; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: transcription regulator LuxR, C-terminal YP_004542784.1 KEGG: mil:ML5_5774 myo-inositol-1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like YP_004542785.1 PFAM: UbiA prenyltransferase; KEGG: nda:Ndas_2325 UbiA prenyltransferase YP_004542786.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: nda:Ndas_2326 xylose isomerase YP_004542787.1 KEGG: sen:SACE_2995 sugar phosphate isomerases/epimerases YP_004542788.1 PFAM: Deoxyribonuclease, TatD-related; KEGG: svi:Svir_11120 metal-dependent hydrolase with TIM-barrel fold protein YP_004542789.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: svi:Svir_11130 xylose isomerase-like enzyme YP_004542790.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: svi:Svir_11140 AP superfamily protein YP_004542791.1 KEGG: cfl:Cfla_1169 hypothetical protein YP_004542792.1 TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: xce:Xcel_2382 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV YP_004542793.1 HAMAP: 3-isopropylmalate dehydrogenase; KEGG: ske:Sked_10780 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase YP_004542794.1 KEGG: ske:Sked_19060 hypothetical protein YP_004542795.1 PFAM: ASCH domain; KEGG: cfl:Cfla_1166 protein of unknown function DUF437 YP_004542796.1 PFAM: acetohydroxy acid isomeroreductase, catalytic; acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: ske:Sked_10700 ketol-acid reductoisomerase YP_004542797.1 KEGG: xce:Xcel_2385 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT YP_004542798.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic; KEGG: xce:Xcel_2386 acetolactate synthase large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_004542799.1 KEGG: ske:Sked_02620 hypothetical protein YP_004542800.1 KEGG: ske:Sked_02610 multidrug ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004542801.1 PFAM: dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: dihydroxy-acid dehydratase; HAMAP: dihydroxy-acid dehydratase; KEGG: cfl:Cfla_1134 dihydroxy-acid dehydratase YP_004542802.1 PFAM: dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: dihydroxy-acid dehydratase; HAMAP: dihydroxy-acid dehydratase; KEGG: bcv:Bcav_1404 dihydroxy-acid dehydratase YP_004542803.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_2392 GCN5-related N-acetyltransferase YP_004542804.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: xce:Xcel_2393 glutamyl-tRNA(Gln) amidotransferase subunit B; PFAM: glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase YP_004542805.1 PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: ske:Sked_10590 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A YP_004542806.1 TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: xce:Xcel_2395 glutamyl-tRNA(Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit YP_004542807.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_2396 GCN5-related N-acetyltransferase YP_004542808.1 KEGG: nda:Ndas_2323 hypothetical protein YP_004542809.1 KEGG: svi:Svir_12340 glucose/sorbosone dehydrogenase; PFAM: PKD; carbohydrate binding domain, family 6; SMART: PKD; Cellulose binding, type IV YP_004542810.1 KEGG: nda:Ndas_4059 xylose isomerase; manually curated; PFAM: Xylose isomerase, TIM barrel domain YP_004542811.1 KEGG: nda:Ndas_4058 monosaccharide-binding protein YP_004542812.1 PFAM: Bacterial inner-membrane translocator; KEGG: nda:Ndas_4057 inner-membrane translocator YP_004542813.1 PFAM: Bacterial inner-membrane translocator; KEGG: nda:Ndas_4056 inner-membrane translocator YP_004542814.1 PFAM: ABC transporter-like; KEGG: sna:Snas_4656 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542815.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: scb:SCAB_16651 hypothetical protein YP_004542816.1 PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: xce:Xcel_2397 xylose isomerase domain-containing protein YP_004542817.1 KEGG: kfl:Kfla_4274 PKD domain containing protein; PFAM: PKD; carbohydrate binding domain, family 6; SMART: PKD; Cellulose binding, type IV YP_004542818.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: xce:Xcel_2398 oxidoreductase domain-containing protein YP_004542819.1 PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: xce:Xcel_2399 periplasmic binding protein/LacI transcriptional regulator YP_004542820.1 PFAM: Bacterial inner-membrane translocator; KEGG: ske:Sked_10510 monosaccharide ABC transporter membrane protein YP_004542821.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_2401 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542822.1 KEGG: ske:Sked_10490 transcriptional regulator/sugar kinase; PFAM: ROK YP_004542823.1 KEGG: bcv:Bcav_0120 hypothetical protein YP_004542824.1 SMART: NAD-dependent DNA ligase, N-terminal; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: xce:Xcel_2404 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT YP_004542825.1 KEGG: xce:Xcel_2406 prolyl oligopeptidase YP_004542826.1 KEGG: ske:Sked_02160 trehalose/maltose hydrolase or phosphorylase; PFAM: glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65, N-terminal; glycoside hydrolase, family 65, C-terminal YP_004542827.1 KEGG: ske:Sked_02150 haloacid dehalogenase superfamily protein; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_004542828.1 KEGG: xce:Xcel_2407 hypothetical protein YP_004542829.1 PFAM: Protein of unknown function DUF1486; KEGG: cai:Caci_3560 protein of unknown function DUF1486 YP_004542830.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: xce:Xcel_2408 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; PFAM: tRNA methyl transferase-like YP_004542831.1 KEGG: xce:Xcel_2409 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004542832.1 PFAM: Protein of unknown function DUF839, bacterial; KEGG: cms:CMS_2946 hypothetical protein YP_004542833.1 KEGG: xce:Xcel_1817 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin biosynthesis MoaE; Molybdopterin binding YP_004542834.1 KEGG: xce:Xcel_1818 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region YP_004542835.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdenum cofactor synthesis; KEGG: xce:Xcel_1819 molybdenum cofactor synthesis domain-containing protein; PFAM: ABC transporter-like; MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV YP_004542836.1 KEGG: kra:Krad_4176 molybdate ABC transporter permease; TIGRFAM: NifC-like ABC-type porter; Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004542837.1 KEGG: xce:Xcel_2808 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004542838.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; Signal transduction response regulator, C-terminal; KEGG: xce:Xcel_1813 uroporphyrinogen III synthase HEM4 YP_004542839.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: bcv:Bcav_2797 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase YP_004542840.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG: xce:Xcel_1814 nitrite reductase (NAD(P)H) small subunit YP_004542841.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: xce:Xcel_1815 nitrite reductase (NAD(P)H) large subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like YP_004542842.1 KEGG: xce:Xcel_3317 aminoglycoside phosphotransferase YP_004542843.1 KEGG: xce:Xcel_1820 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region YP_004542844.1 KEGG: xce:Xcel_1821 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region YP_004542845.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_2802 major facilitator superfamily MFS_1 YP_004542846.1 KEGG: xce:Xcel_1829 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; MoeA, N-terminal region, domain I/II; MoeA, C-terminal, domain IV YP_004542847.1 KEGG: xce:Xcel_1830 hypothetical protein YP_004542848.1 KEGG: xce:Xcel_1831 hypothetical protein YP_004542849.1 TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: xce:Xcel_1832 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004542850.1 PFAM: ThiamineS; KEGG: xce:Xcel_1833 thiamineS protein YP_004542851.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: xce:Xcel_1816 UBA/ThiF-type NAD/FAD binding protein YP_004542852.1 PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: xce:Xcel_2411 electron transfer flavoprotein subunit alpha YP_004542853.1 PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: xce:Xcel_2412 electron transfer flavoprotein subunit alpha/beta YP_004542854.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: glycogen debranching enzyme GlgX; KEGG: xce:Xcel_2413 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13, N-terminal; glycosyl hydrolase, family 13, catalytic region YP_004542855.1 PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: xce:Xcel_2414 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004542856.1 KEGG: bcv:Bcav_2158 hypothetical protein YP_004542857.1 KEGG: xce:Xcel_2417 alpha amylase catalytic subunit; PFAM: glycosyl hydrolase, family 13, catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004542858.1 SMART: glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; KEGG: xce:Xcel_2418 trehalose synthase; PFAM: glycosyl hydrolase, family 13, catalytic region YP_004542859.1 PFAM: Aminoglycoside phosphotransferase; KEGG: xce:Xcel_2419 aminoglycoside phosphotransferase YP_004542860.1 KEGG: xce:Xcel_2421 1,4-alpha-glucan branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; glycoside hydrolase, family 13, N-terminal; glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004542861.1 PFAM: Thioredoxin domain; KEGG: xce:Xcel_2422 tetratricopeptide TPR_2 repeat-containing protein YP_004542862.1 KEGG: xce:Xcel_2423 hypothetical protein YP_004542863.1 KEGG: xce:Xcel_2424 hypothetical protein YP_004542864.1 KEGG: xce:Xcel_2425 hypothetical protein YP_004542865.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_2426 alpha/beta hydrolase fold protein YP_004542866.1 KEGG: xce:Xcel_2427 hydrolase of the alpha/beta superfamily-like protein YP_004542867.1 KEGG: xce:Xcel_2428 hypothetical protein YP_004542868.1 PFAM: peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: xce:Xcel_2429 peptidylprolyl isomerase FKBP-type YP_004542869.1 KEGG: cwo:Cwoe_4197 alpha/beta hydrolase fold protein YP_004542870.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rha:RHA1_ro00066 transcriptional regulator YP_004542871.1 KEGG: mmw:Mmwyl1_2434 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004542873.1 KEGG: pfr:PFREUD_04910 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004542874.1 KEGG: aau:AAur_pTC10129 cobalt-zinc-cadmium efflux permease; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004542875.1 PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: nda:Ndas_4213 arginine biosynthesis bifunctional protein ArgJ YP_004542876.1 KEGG: nml:Namu_0275 urease accessory protein UreH-like protein YP_004542877.1 TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: nml:Namu_0274 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like YP_004542878.1 KEGG: tpr:Tpau_3408 urease accessory protein YP_004542879.1 PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; Urease, beta subunit; TIGRFAM: Urease, alpha subunit; Urease, beta subunit; HAMAP: Urease subunit alpha; KEGG: cfl:Cfla_0697 urease, alpha subunit YP_004542880.1 TIGRFAM: Urease, alpha/gamma subunit; KEGG: nml:Namu_0268 urease subunit gamma; PFAM: Urease, alpha/gamma subunit YP_004542881.1 PFAM: ABC transporter-like; KEGG: ppg:PputGB1_2662 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004542882.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_10080 ABC transporter permease protein YP_004542883.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_5789 dipeptide/oligopeptide ABC transporter, permease protein YP_004542884.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: req:REQ_45420 oligopeptide/dipeptide abc transporter substrate binding lipoprotein YP_004542885.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3622 binding-protein-dependent transport systems inner membrane component YP_004542886.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: fri:FraEuI1c_3623 binding-protein-dependent transport systems inner membrane component YP_004542887.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: mjl:Mjls_1824 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal YP_004542888.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bln:Blon_2472 major facilitator superfamily MFS_1 YP_004542889.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: mjl:Mjls_1828 extracellular solute-binding protein YP_004542890.1 TIGRFAM: agmatinase; KEGG: mva:Mvan_3024 agmatinase; PFAM: Ureohydrolase YP_004542891.1 TIGRFAM: agmatinase; KEGG: sro:Sros_4346 agmatinase; PFAM: Ureohydrolase YP_004542892.1 KEGG: sen:SACE_5322 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004542893.1 KEGG: kra:Krad_2014 dihydrodipicolinate synthetase; manually curated; PFAM: dihydrodipicolinate synthetase YP_004542894.1 PFAM: NERD; KEGG: art:Arth_3664 hypothetical protein YP_004542895.1 KEGG: xce:Xcel_2436 ribonucleoside-diphosphate reductase; PFAM: ribonucleotide reductase YP_004542896.1 KEGG: xce:Xcel_2437 ribonucleoside-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit, C-terminal; ribonucleotide reductase N-terminal; ribonucleotide reductase large subunit, N-terminal YP_004542897.1 TIGRFAM: ribonucleotide reductase Class Ib, NrdI; HAMAP: ribonucleotide reductase Class Ib, NrdI, bacterial; KEGG: xce:Xcel_2438 NrdI protein; PFAM: ribonucleotide reductase Class Ib, NrdI YP_004542898.1 KEGG: xce:Xcel_2439 glutaredoxin-like protein NrdH; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin YP_004542899.1 PFAM: Beta-lactamase-related; KEGG: sro:Sros_4519 beta-lactamase YP_004542900.1 TIGRFAM: glycoside hydrolase, family 1, beta-glucosidase; KEGG: xce:Xcel_2440 beta-galactosidase; PFAM: glycoside hydrolase, family 1 YP_004542901.1 PFAM: glycoside hydrolase, family 31; KEGG: xce:Xcel_1194 glycoside hydrolase family 31 YP_004542902.1 KEGG: xce:Xcel_1193 beta-galactosidase; PFAM: glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal YP_004542903.1 KEGG: xce:Xcel_1192 hypothetical protein YP_004542904.1 KEGG: cfl:Cfla_1083 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004542905.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_10100 carbohydrate ABC transporter membrane protein YP_004542906.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_10090 polysaccharide ABC transporter permease YP_004542907.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_10080 sugar ABC transporter periplasmic protein YP_004542908.1 KEGG: xce:Xcel_1195 beta-glucosidase; PFAM: glycoside hydrolase, family 3, C-terminal; glycoside hydrolase, family 3, N-terminal YP_004542909.1 KEGG: xce:Xcel_2442 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1 YP_004542910.1 KEGG: ske:Sked_10060 nuclease of the RecB family; HAMAP: UPF0286 protein; PFAM: Uncharacterised protein family UPF0286 YP_004542911.1 PFAM: Protein of unknown function DUF2550; KEGG: xce:Xcel_2446 hypothetical protein YP_004542912.1 KEGG: xce:Xcel_2447 H+transporting two-sector ATPase delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal YP_004542913.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: cfl:Cfla_1072 ATP synthase F1, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004542914.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: cfl:Cfla_1071 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit YP_004542915.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: xce:Xcel_2450 ATP synthase F1 subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YP_004542916.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: xce:Xcel_2451 ATP synthase F1 subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit YP_004542917.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: cfl:Cfla_1068 ATP synthase F0, B subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast YP_004542918.1 TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: xce:Xcel_2453 ATP synthase F0 subunit C; PFAM: ATPase, F0/V0 complex, subunit C YP_004542919.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: xce:Xcel_2454 ATP synthase F0 subunit A; PFAM: ATPase, F0 complex, subunit A YP_004542920.1 KEGG: xce:Xcel_2455 hypothetical protein YP_004542921.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: xce:Xcel_2456 glycosyl transferase family 4 YP_004542922.1 KEGG: cfl:Cfla_1063 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal YP_004542923.1 KEGG: xce:Xcel_2458 modification methylase, HemK family; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase type 11 YP_004542924.1 TIGRFAM: peptide chain release factor 1; HAMAP: peptide chain release factor 1; KEGG: xce:Xcel_2459 peptide chain release factor 1; PFAM: Class I peptide chain release factor; peptide chain release factor YP_004542925.1 TIGRFAM: ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: cfl:Cfla_1060 ribosomal protein L31; PFAM: ribosomal protein L31 YP_004542926.1 TIGRFAM: transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: xce:Xcel_2462 transcription termination factor Rho; SMART: ATPase, AAA+ type, core; Cold shock protein YP_004542927.1 TIGRFAM: Homoserine kinase; HAMAP: Homoserine kinase; KEGG: xce:Xcel_2463 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal YP_004542928.1 TIGRFAM: Threonine synthase; KEGG: cfl:Cfla_1056 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_004542929.1 PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: xce:Xcel_2465 homoserine dehydrogenase YP_004542930.1 KEGG: nda:Ndas_0217 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8/S53, subtilisin/kexin/sedolisin; Protease-associated PA; peptidase S8A, DUF1034 C-terminal YP_004542931.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: cfl:Cfla_1053 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004542932.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: xce:Xcel_2467 arginyl-tRNA synthetase YP_004542933.1 KEGG: xce:Xcel_2478 2-methylcitrate dehydratase; PFAM: MmgE/PrpD YP_004542934.1 TIGRFAM: Methylisocitrate lyase; KEGG: xce:Xcel_2479 methylisocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase YP_004542935.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: xce:Xcel_2480 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase-like YP_004542936.1 KEGG: xce:Xcel_2481 hypothetical protein YP_004542937.1 PFAM: peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: xce:Xcel_2482 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_004542938.1 KEGG: xce:Xcel_2483 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_004542939.1 KEGG: xce:Xcel_2484 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; transporter-associated region; SMART: Cystathionine beta-synthase, core YP_004542940.1 manually curated; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: xce:Xcel_2485 winged helix family two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region YP_004542941.1 KEGG: xce:Xcel_2486 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004542942.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: xce:Xcel_2487 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain YP_004542943.1 PFAM: Aldo/keto reductase; KEGG: xce:Xcel_2488 aldo/keto reductase YP_004542944.1 PFAM: Aldose 1-epimerase; KEGG: xce:Xcel_2489 aldose 1-epimerase YP_004542945.1 KEGG: xce:Xcel_2490 acyl-CoA thioesterase I YP_004542946.1 KEGG: cfl:Cfla_1212 hypothetical protein YP_004542947.1 manually curated YP_004542948.1 TIGRFAM: Anti-sigma factor RshA; KEGG: xce:Xcel_2491 anti-sigma factor YP_004542949.1 KEGG: xce:Xcel_2492 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004542950.1 PFAM: DoxX; KEGG: xce:Xcel_2493 DoxX family protein YP_004542951.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: xce:Xcel_2494 3-phosphoshikimate 1-carboxyvinyltransferase YP_004542952.1 KEGG: xce:Xcel_2495 GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; PFAM: GTPase EngC YP_004542953.1 KEGG: xce:Xcel_2496 histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase, , inositol monophosphatase; PFAM: Inositol monophosphatase YP_004542954.1 KEGG: xce:Xcel_2497 hypothetical protein YP_004542955.1 KEGG: xce:Xcel_2499 hypothetical protein YP_004542956.1 KEGG: xce:Xcel_2500 hypothetical protein YP_004542957.1 PFAM: Prophage CP4-57 regulatory; KEGG: xce:Xcel_2501 prophage CP4-57 regulatory YP_004542958.1 KEGG: xce:Xcel_2502 hypothetical protein YP_004542959.1 PFAM: peptidoglycan-binding lysin domain; KEGG: xce:Xcel_2503 hypothetical protein YP_004542960.1 KEGG: xce:Xcel_2504 TonB family protein YP_004542961.1 TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: xce:Xcel_2505 preprotein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif YP_004542962.1 KEGG: apn:Asphe3_35830 hypothetical protein YP_004542963.1 PFAM: Regulator of K+ conductance, N-terminal; Cation/H+ exchanger; KEGG: hel:HELO_3435 sodium/hydrogen exchanger YP_004542964.1 PFAM: Protein of unknown function DUF1006; KEGG: xce:Xcel_2506 hypothetical protein YP_004542965.1 KEGG: xce:Xcel_2507 sigma 54 modulation protein/30S ribosomal protein S30EA; TIGRFAM: ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: ribosomal protein S30Ae/sigma 54 modulation protein YP_004542966.1 PFAM: phosphoribosyltransferase; KEGG: xce:Xcel_2508 competence protein F YP_004542967.1 PFAM: Lipoprotein LpqB, beta-propeller domain, C-terminal; Lipoprotein LpqB, GerMN domain; KEGG: xce:Xcel_2512 hypothetical protein YP_004542968.1 KEGG: xce:Xcel_2513 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004542969.1 KEGG: xce:Xcel_2514 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004542970.1 KEGG: xce:Xcel_2515 hypothetical protein YP_004542971.1 KEGG: xce:Xcel_2516 hypothetical protein YP_004542972.1 PFAM: Protein of unknown function DUF58; KEGG: xce:Xcel_2519 hypothetical protein YP_004542973.1 PFAM: Protein of unknown function DUF95, transmembrane; KEGG: xce:Xcel_2521 hypothetical protein YP_004542974.1 PFAM: RDD; KEGG: xce:Xcel_2522 RDD domain containing protein YP_004542975.1 KEGG: ami:Amir_4758 peptidase M14 carboxypeptidase A; PFAM: peptidase M14, carboxypeptidase A; SMART: peptidase M14, carboxypeptidase A YP_004542976.1 KEGG: ske:Sked_12710 hypothetical protein YP_004542977.1 PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: adenosylhomocysteinase; KEGG: xce:Xcel_2526 adenosylhomocysteinase YP_004542978.1 PFAM: acyltransferase 3; KEGG: bcv:Bcav_1160 acyltransferase 3 YP_004542979.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2528 major facilitator superfamily protein YP_004542980.1 SMART: ATPase, AAA+ type, core; TIGRFAM: glycine betaine/L-proline transport ATP-binding subunit; KEGG: xce:Xcel_2529 glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter-like YP_004542981.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_2530 binding-protein-dependent transport systems inner membrane component YP_004542982.1 PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: xce:Xcel_2531 substrate-binding region of ABC-type glycine betaine transport system YP_004542983.1 KEGG: ach:Achl_1053 protein of unknown function DUF1275; manually curated; PFAM: Protein of unknown function DUF1275 YP_004542984.1 KEGG: art:Arth_0896 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004542985.1 PFAM: acyltransferase 3; KEGG: mau:Micau_3459 acyltransferase 3 YP_004542986.1 PFAM: Protein synthesis factor, GTP-binding; translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: mau:Micau_0758 sulfate adenylyltransferase large subunit YP_004542987.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: gob:Gobs_4661 sulfate adenylyltransferase small subunit; PFAM: phosphoadenosine phosphosulphate reductase YP_004542988.1 PFAM: Inositol monophosphatase; KEGG: kfl:Kfla_2718 inositol monophosphatase YP_004542989.1 PFAM: Protein of unknown function DUF81; KEGG: kfl:Kfla_2739 hypothetical protein YP_004542990.1 PFAM: adenylylsulphate kinase, C-terminal; TIGRFAM: adenylylsulphate kinase, C-terminal; HAMAP: adenylyl-sulfate kinase; KEGG: tfu:Tfu_0425 adenylylsulfate kinase YP_004542991.1 KEGG: xce:Xcel_2541 hypothetical protein YP_004542992.1 KEGG: xce:Xcel_2542 phosphomannomutase; manually curated; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal YP_004542993.1 TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: xce:Xcel_2543 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I YP_004542994.1 KEGG: xce:Xcel_2544 hypothetical protein YP_004542995.1 PFAM: Protein of unknown function DUF1025; KEGG: xce:Xcel_2545 hypothetical protein YP_004542996.1 KEGG: xce:Xcel_2547 hypothetical protein YP_004542997.1 PFAM: transcription factor WhiB; KEGG: xce:Xcel_2549 transcription factor WhiB YP_004542998.1 TIGRFAM: Conserved hypothetical protein CHP03089; KEGG: xce:Xcel_2550 hypothetical protein YP_004542999.1 PFAM: Methyltransferase type 11; KEGG: xce:Xcel_2551 type 11 methyltransferase YP_004543000.1 KEGG: xce:Xcel_2555 hypothetical protein YP_004543001.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: nml:Namu_4461 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal YP_004543002.1 PFAM: glycosyl transferase, family 2; KEGG: cfl:Cfla_2344 glycosyl transferase family 2 YP_004543003.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: xce:Xcel_2557 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004543004.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ske:Sked_09030 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004543005.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: cfl:Cfla_2351 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related YP_004543006.1 PFAM: glycosyl transferase, group 1; KEGG: cfl:Cfla_2357 glycosyl transferase group 1 YP_004543007.1 KEGG: cfl:Cfla_2381 hypothetical protein YP_004543008.1 KEGG: cfl:Cfla_2380 LGFP repeat protein YP_004543009.1 KEGG: xce:Xcel_2552 hypothetical protein YP_004543010.1 KEGG: xce:Xcel_2553 hypothetical protein YP_004543011.1 PFAM: glycosyl transferase, family 2; KEGG: xce:Xcel_2554 glycosyl transferase family 2 protein YP_004543012.1 PFAM: glycosyl transferase, group 1; KEGG: cfl:Cfla_2361 glycosyl transferase group 1 YP_004543013.1 PFAM: glycosyl transferase, family 2; KEGG: cfl:Cfla_2362 glycosyl transferase family 2 YP_004543014.1 PFAM: glycosyl transferase, family 2; KEGG: cfl:Cfla_2365 glycosyl transferase family 2 YP_004543016.1 PFAM: Protein of unknown function, membrane YfhO; KEGG: cai:Caci_2073 hypothetical protein YP_004543017.1 PFAM: ABC-2 type transporter; KEGG: cfl:Cfla_2371 ABC-2 type transporter YP_004543018.1 PFAM: ABC transporter-like; KEGG: cfl:Cfla_2372 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_004543019.1 PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein YP_004543020.1 PFAM: Methyltransferase type 11; KEGG: mem:Memar_0192 glycosyl transferase family protein YP_004543021.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: xce:Xcel_2563 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004543022.1 KEGG: xce:Xcel_2594 cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004543023.1 KEGG: ske:Sked_08560 cell envelope-related transcriptional attenuator domain-containing protein; TIGRFAM: Cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator YP_004543024.1 TIGRFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: ske:Sked_08550 phosphoribosylaminoimidazole carboxylase, PurE protein; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004543025.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ske:Sked_08540 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YP_004543026.1 KEGG: mts:MTES_2158 glycosidase; PFAM: glycosyl hydrolase, family 13, catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004543027.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_31520 carbohydrate ABC transporter membrane protein YP_004543028.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_31530 carbohydrate ABC transporter membrane protein YP_004543029.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ske:Sked_31540 sugar ABC transporter periplasmic protein YP_004543030.1 KEGG: ske:Sked_31550 alpha-galactosidase; PFAM: glycoside hydrolase, clan GH-D YP_004543031.1 PFAM: ROK; KEGG: ske:Sked_31570 transcriptional regulator/sugar kinase YP_004543032.1 PFAM: GtrA-like protein; KEGG: ske:Sked_08530 hypothetical protein YP_004543033.1 KEGG: xce:Xcel_2598 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004543034.1 manually curated; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: xce:Xcel_2599 winged helix family two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region YP_004543035.1 KEGG: xce:Xcel_2600 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like YP_004543036.1 KEGG: ske:Sked_08490 CheY-like receiver domain/HTH DNA-binding domain-containing response regulator; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004543037.1 KEGG: sco:SCO0906 hypothetical protein; TIGRFAM: F420-binding domain, PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YP_004543038.1 KEGG: xce:Xcel_2602 hypothetical protein YP_004543039.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_2603 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543040.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: xce:Xcel_2604 hypothetical protein YP_004543041.1 KEGG: xce:Xcel_2606 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; SMART: ATPase, AAA+ type, core YP_004543042.1 PFAM: transcription factor WhiB; KEGG: xce:Xcel_2608 transcription factor WhiB YP_004543043.1 KEGG: xce:Xcel_2609 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; PAS fold-4; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like YP_004543044.1 PFAM: Protein of unknown function DUF2505; Polyketide cyclase/dehydrase; KEGG: xce:Xcel_2610 hypothetical protein YP_004543045.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bcv:Bcav_2837 extracellular solute-binding protein family 1 YP_004543046.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_2838 binding-protein-dependent transport systems inner membrane component YP_004543047.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_08400 carbohydrate ABC transporter membrane protein YP_004543048.1 TIGRFAM: glycoside hydrolase, family 1, beta-glucosidase; KEGG: xce:Xcel_2614 beta-galactosidase; PFAM: glycoside hydrolase, family 1 YP_004543049.1 KEGG: xce:Xcel_2615 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004543050.1 PFAM: Aldehyde dehydrogenase; Proline dehydrogenase; KEGG: xce:Xcel_2617 aldehyde dehydrogenase YP_004543051.1 TIGRFAM: PAS; PFAM: PAS fold-4; Helix-turn-helix, AraC type; KEGG: bcv:Bcav_2851 transcriptional regulator with PAS/PAC sensors, AraC family; SMART: Helix-turn-helix, AraC domain YP_004543052.1 PFAM: BioY protein; KEGG: sma:SAV_5421 biotin synthase YP_004543053.1 KEGG: xce:Xcel_2618 aldo/keto reductase; PFAM: Aldo/keto reductase YP_004543054.1 KEGG: xce:Xcel_2621 Glu/Leu/Phe/Val dehydrogenase; PFAM: glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region YP_004543055.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: xce:Xcel_0131 antibiotic biosynthesis monooxygenase YP_004543056.1 KEGG: xce:Xcel_2622 modification methylase, HemK family; TIGRFAM: protein-(glutamine-N5) methyltransferase, unknown substrate-specific; Modification methylase HemK; PFAM: Methyltransferase small YP_004543057.1 PFAM: Chlorite dismutase; KEGG: xce:Xcel_2623 chlorite dismutase YP_004543058.1 TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: xce:Xcel_2624 ferrochelatase; PFAM: Ferrochelatase YP_004543059.1 KEGG: xce:Xcel_0764 hypothetical protein YP_004543060.1 KEGG: xce:Xcel_2625 acetyltransferase YP_004543061.1 TIGRFAM: glycerate kinase; KEGG: xce:Xcel_2626 glycerate kinase; PFAM: glycerate kinase YP_004543062.1 PFAM: NADPH-dependent FMN reductase; KEGG: bcv:Bcav_1725 NADPH-dependent FMN reductase YP_004543063.1 KEGG: ach:Achl_2289 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004543064.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: UDP pyrophosphate synthase; KEGG: xce:Xcel_2629 UDP diphosphate synthase YP_004543065.1 PFAM: Hly-III related; KEGG: xce:Xcel_2630 Hly-III family protein YP_004543066.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cfl:Cfla_0944 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004543067.1 KEGG: xce:Xcel_2632 hypothetical protein YP_004543068.1 KEGG: xce:Xcel_2633 mycothiol conjugate amidase Mca; TIGRFAM: Mycothiol conjugate amidase, Mca; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase YP_004543069.1 KEGG: xce:Xcel_2634 secretion protein HlyD family protein YP_004543070.1 PFAM: transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: xce:Xcel_2635 GreA/GreB family elongation factor YP_004543071.1 KEGG: xce:Xcel_2234 ECF subfamily RNA polymerase sigma-24 subunit YP_004543072.1 KEGG: xce:Xcel_2636 threonine dehydratase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT YP_004543073.1 PFAM: Uncharacterised protein family UPF0118; KEGG: xce:Xcel_2637 hypothetical protein YP_004543074.1 PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: xce:Xcel_2638 cystathionine gamma-synthase YP_004543075.1 PFAM: glycosyl hydrolase, family 13, catalytic region; KEGG: ica:Intca_0450 alpha amylase catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic region YP_004543076.1 PFAM: peptide methionine sulphoxide reductase MsrA; TIGRFAM: peptide methionine sulphoxide reductase MsrA; HAMAP: peptide methionine sulphoxide reductase MsrA; KEGG: xce:Xcel_2640 peptide methionine sulfoxide reductase YP_004543077.1 KEGG: mts:MTES_2737 NADH-flavin reductase YP_004543078.1 PFAM: Helix-turn-helix, HxlR type; KEGG: xce:Xcel_0287 HxlR family transcriptional regulator YP_004543079.1 PFAM: ATP dependent DNA ligase, central; DNA ligase, N-terminal; ATP dependent DNA ligase, C-terminal; TIGRFAM: ATP-dependent DNA ligase; HAMAP: DNA ligase; KEGG: xce:Xcel_2642 DNA ligase I, ATP-dependent Dnl1 YP_004543080.1 KEGG: xce:Xcel_2643 hypothetical protein YP_004543081.1 PFAM: LysR, substrate-binding; KEGG: xce:Xcel_2644 LysR family transcriptional regulator YP_004543082.1 KEGG: xce:Xcel_2645 hypothetical protein YP_004543083.1 TIGRFAM: SelT/selW/selH selenoprotein; KEGG: rop:ROP_54540 hypothetical protein YP_004543084.1 KEGG: xce:Xcel_2646 rRNA (guanine-N(2)-)-methyltransferase; PFAM: Methyltransferase small YP_004543085.1 PFAM: peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: xce:Xcel_2669 peptidylprolyl isomerase FKBP-type YP_004543086.1 KEGG: kra:Krad_2822 LysR family transcriptional regulator YP_004543087.1 PFAM: glycoside hydrolase 15-related; KEGG: xce:Xcel_2670 glycoside hydrolase 15-like protein YP_004543088.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: Cystathionine beta-synthase; KEGG: xce:Xcel_2671 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core YP_004543089.1 PFAM: Protein of unknown function DUF1112; KEGG: xce:Xcel_2672 hypothetical protein YP_004543090.1 KEGG: xce:Xcel_2673 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004543091.1 KEGG: xce:Xcel_2674 hypothetical protein YP_004543092.1 PFAM: Acriflavin resistance protein; MMPL; KEGG: cfl:Cfla_0919 acriflavin resistance protein YP_004543094.1 KEGG: art:Arth_2852 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004543095.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: kra:Krad_4258 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14, ClpP YP_004543096.1 HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: rop:ROP_12310 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14, ClpP YP_004543097.1 KEGG: xce:Xcel_2676 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004543098.1 KEGG: ske:Sked_07880 Ppx/GppA phosphatase; manually curated; PFAM: Ppx/GppA phosphatase YP_004543099.1 PFAM: Protein of unknown function DUF501; KEGG: ske:Sked_07870 hypothetical protein YP_004543100.1 PFAM: Septum formation initiator; KEGG: xce:Xcel_2681 septum formation initiator YP_004543101.1 PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: cfl:Cfla_0907 enolase YP_004543102.1 KEGG: bcv:Bcav_1843 DNA alkylation repair enzyme YP_004543103.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair-coupling factor; KEGG: xce:Xcel_2685 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004543104.1 KEGG: xce:Xcel_0139 hypothetical protein YP_004543105.1 PFAM: peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; HAMAP: peptidyl-tRNA hydrolase; KEGG: xce:Xcel_2704 peptidyl-tRNA hydrolase YP_004543106.1 TIGRFAM: ribosomal protein L25; HAMAP: ribosomal protein L25; KEGG: xce:Xcel_2705 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25, N-terminal YP_004543107.1 TIGRFAM: phosphoribosyl pyrophosphokinase; KEGG: xce:Xcel_2708 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004543108.1 KEGG: cfl:Cfla_0880 UDP-N-acetylglucosamine pyrophosphorylase; manually curated; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_004543109.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_2710 TetR family transcriptional regulator YP_004543110.1 KEGG: xce:Xcel_2713 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004543111.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xce:Xcel_2714 major facilitator superfamily protein YP_004543112.1 KEGG: bfa:Bfae_03900 beta-lactamase class A YP_004543113.1 TIGRFAM: L-lysine 6-transaminase; KEGG: rop:ROP_63400 L-lysine aminotransferase; PFAM: Aminotransferase class-III YP_004543114.1 KEGG: mab:MAB_3647c transcriptional regulatory protein; PFAM: transcription regulator, AsnC-type, C-terminal; SMART: transcription regulator, AsnC-type YP_004543115.1 KEGG: cfl:Cfla_0865 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004543116.1 KEGG: xce:Xcel_2723 acetyl xylan esterase; PFAM: acetyl xylan esterase YP_004543117.1 PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: xce:Xcel_2724 4-diphosphocytidyl-2C-methyl-D-erythritolkinase YP_004543118.1 SMART: ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: ribosomal RNA adenine dimethylase; KEGG: xce:Xcel_2725 dimethyladenosine transferase; HAMAP: ribosomal RNA adenine dimethylase; PFAM: ribosomal RNA adenine methylase transferase YP_004543119.1 PFAM: G5; Protein of unknown function DUF348; KEGG: xce:Xcel_2726 G5 domain-containing protein YP_004543120.1 PFAM: transglycosylase-like; G5; Protein of unknown function DUF348; KEGG: xce:Xcel_2727 transglycosylase domain-containing protein YP_004543121.1 PFAM: G5; Protein of unknown function DUF348; KEGG: xce:Xcel_2729 G5 domain-containing protein YP_004543122.1 PFAM: Deoxyribonuclease, TatD-related; KEGG: xce:Xcel_2730 TatD-related deoxyribonuclease YP_004543123.1 PFAM: Aminoacyl-tRNA synthetase, class I (M); TIGRFAM: Methionyl-tRNA synthetase, class Ia; HAMAP: Methionyl-tRNA synthetase; KEGG: cfl:Cfla_0850 methionyl-tRNA synthetase YP_004543124.1 KEGG: xce:Xcel_2732 glucose sorbosone dehydrogenase YP_004543126.1 PFAM: Isochorismatase-like; KEGG: xce:Xcel_2734 isochorismatase hydrolase YP_004543127.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: ribosomal RNA small subunit methyltransferase I; KEGG: xce:Xcel_2735 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase YP_004543128.1 PFAM: glycosyl transferase, family 39; KEGG: xce:Xcel_2736 glycosyl transferase family 39 YP_004543129.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: xce:Xcel_2737 beta-N-acetylhexosaminidase YP_004543130.1 KEGG: xce:Xcel_2738 hypothetical protein YP_004543131.1 KEGG: xce:Xcel_2811 hypothetical protein YP_004543132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_2812 GCN5-related N-acetyltransferase YP_004543133.1 KEGG: xce:Xcel_2813 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004543134.1 PFAM: peptidase S45, penicillin amidase; KEGG: xce:Xcel_2814 peptidase S45 penicillin amidase YP_004543135.1 KEGG: msm:MSMEG_5479 type I antifreeze protein; TIGRFAM: Regulatory protein, FmdB, PFAM: Regulatory protein, FmdB YP_004543136.1 PFAM: SAF domain; KEGG: xce:Xcel_2816 SAF domain-containing protein YP_004543137.1 TIGRFAM: Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; KEGG: cfl:Cfla_0832 large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel YP_004543138.1 KEGG: xce:Xcel_2819 hypothetical protein YP_004543139.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_1603 major facilitator superfamily MFS_1 YP_004543140.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase; KEGG: dra:DR_1910 thermoresistant gluconokinase; PFAM: Shikimate kinase YP_004543141.1 PFAM: Mannonate dehydratase; TIGRFAM: Mannonate dehydratase; HAMAP: Mannonate dehydratase; KEGG: hel:HELO_1152 mannonate dehydratase YP_004543142.1 KEGG: sgr:SGR_924 hypothetical protein; PFAM: carbohydrate binding domain, family 6; PKD; SMART: PKD; Cellulose binding, type IV YP_004543143.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: bcv:Bcav_3348 oxidoreductase domain protein YP_004543144.1 PFAM: ABC transporter-like; KEGG: msm:MSMEG_2633 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_004543145.1 KEGG: amd:AMED_5075 sulfonate/nitrate/taurine ABC transporter periplasmic protein YP_004543146.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_929 ABC transporter permease protein YP_004543147.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: art:Arth_0499 xylose isomerase domain-containing protein YP_004543148.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: kvu:EIO_3024 xylose isomerase domain protein TIM barrel YP_004543149.1 KEGG: fri:FraEuI1c_5659 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_004543150.1 KEGG: gob:Gobs_1558 hypothetical protein YP_004543151.1 PFAM: Protein of unknown function DUF664; KEGG: kfl:Kfla_0341 hypothetical protein YP_004543152.1 manually curated; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; KEGG: cfl:Cfla_0810 helicase domain protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004543153.1 KEGG: sgr:SGR_4822 hypothetical protein YP_004543154.1 PFAM: ROK; KEGG: xce:Xcel_2826 ROK family protein YP_004543155.1 KEGG: xce:Xcel_2827 xylose isomerase; TIGRFAM: Xylose isomerase, actinobacteria; PFAM: Xylose isomerase, TIM barrel domain YP_004543156.1 TIGRFAM: Xylulokinase; KEGG: xce:Xcel_2828 xylulokinase; PFAM: carbohydrate kinase, FGGY, N-terminal; carbohydrate kinase, FGGY, C-terminal YP_004543157.1 KEGG: bcv:Bcav_1327 hypothetical protein YP_004543160.1 KEGG: cai:Caci_4620 hypothetical protein YP_004543161.1 KEGG: cfl:Cfla_3389 hypothetical protein YP_004543162.1 KEGG: xce:Xcel_2833 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004543163.1 PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: xce:Xcel_2834 thymidylate synthase YP_004543164.1 KEGG: xce:Xcel_2838 hypothetical protein YP_004543165.1 PFAM: glycosyl transferase, group 1; KEGG: tbi:Tbis_2855 group 1 glycosyl transferase YP_004543166.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: xce:Xcel_2839 OsmC family protein YP_004543167.1 KEGG: xce:Xcel_2840 hypothetical protein YP_004543168.1 PFAM: Polyketide cyclase/dehydrase; KEGG: ske:Sked_30690 polyketide cyclase / dehydrase and lipid transport YP_004543169.1 PFAM: Aminotransferase, class I/II; KEGG: xce:Xcel_2841 GntR family transcriptional regulator YP_004543170.1 PFAM: Beta-lactamase-related; KEGG: bcv:Bcav_2991 beta-lactamase YP_004543171.1 KEGG: xce:Xcel_2354 hypothetical protein YP_004543172.1 KEGG: xce:Xcel_2355 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_004543173.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: bcv:Bcav_1235 daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter-like YP_004543174.1 PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter YP_004543175.1 KEGG: bcv:Bcav_1237 hypothetical protein YP_004543176.1 PFAM: UspA; KEGG: xce:Xcel_2842 UspA domain-containing protein YP_004543177.1 PFAM: NLP/P60; KEGG: xce:Xcel_2843 NLP/P60 protein YP_004543178.1 PFAM: NLP/P60; KEGG: xce:Xcel_2844 NLP/P60 protein YP_004543179.1 KEGG: xce:Xcel_2845 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; SMART: Iron dependent repressor YP_004543180.1 TIGRFAM: phosphoserine aminotransferase, Mycobacterial type; KEGG: xce:Xcel_2846 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_004543181.1 PFAM: MHYT; KEGG: tcu:Tcur_3716 integral membrane sensor protein YP_004543182.1 PFAM: MHYT; KEGG: tcu:Tcur_3716 integral membrane sensor protein YP_004543183.1 PFAM: Major facilitator superfamily MFS-1; KEGG: cfl:Cfla_0768 major facilitator superfamily MFS_1 YP_004543184.1 KEGG: ske:Sked_30810 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004543186.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ske:Sked_30830 permease YP_004543187.1 KEGG: xce:Xcel_2927 hypothetical protein YP_004543188.1 KEGG: cfl:Cfla_0748 hypothetical protein YP_004543189.1 KEGG: xce:Xcel_2929 hypothetical protein YP_004543190.1 KEGG: xce:Xcel_2930 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004543191.1 KEGG: ske:Sked_31420 hypothetical protein YP_004543192.1 KEGG: xce:Xcel_2932 type III restriction protein res subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal YP_004543193.1 KEGG: cfl:Cfla_3215 F420-dependent oxidoreductase, G6PDH family; TIGRFAM: Glucose-6-phosphate dehydrogenase-related, F420-dependent; PFAM: Luciferase-like, subgroup YP_004543194.1 PFAM: Protein of unknown function DUF202; KEGG: kra:Krad_3719 hypothetical protein YP_004543195.1 KEGG: cmi:CMM_2838 hypothetical protein YP_004543196.1 PFAM: Uncharacterised protein family UPF0118; KEGG: cfl:Cfla_3466 protein of unknown function UPF0118 YP_004543197.1 PFAM: Protein of unknown function DUF477; KEGG: xce:Xcel_2933 hypothetical protein YP_004543198.1 PFAM: PspA/IM30; KEGG: xce:Xcel_2934 phage shock protein A, PspA YP_004543199.1 PFAM: glutamine amidotransferase class-I, C-terminal; KEGG: xce:Xcel_2935 glutamine amidotransferase class-I YP_004543200.1 KEGG: xce:Xcel_2936 hypothetical protein YP_004543201.1 KEGG: ske:Sked_32180 hypothetical protein YP_004543202.1 KEGG: sco:SCO3787 integral membrane protein YP_004543203.1 KEGG: xce:Xcel_2937 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004543204.1 KEGG: xce:Xcel_2938 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004543205.1 KEGG: xce:Xcel_2939 hypothetical protein YP_004543206.1 KEGG: bcv:Bcav_0837 hypothetical protein YP_004543207.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: xce:Xcel_2941 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1 YP_004543208.1 KEGG: kra:Krad_3637 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_004543209.1 KEGG: xce:Xcel_2942 hypothetical protein YP_004543210.1 KEGG: kra:Krad_3638 hypothetical protein YP_004543211.1 TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: xce:Xcel_2944 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like YP_004543212.1 PFAM: Lipase, GDSL; KEGG: xce:Xcel_2945 G-D-S-L family lipolytic protein YP_004543213.1 PFAM: DSBA oxidoreductase; KEGG: xce:Xcel_2947 DsbA oxidoreductase YP_004543214.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: xce:Xcel_2948 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain YP_004543215.1 KEGG: xce:Xcel_2949 trehalose-phosphatase; PFAM: glycosyl transferase, family 20 YP_004543216.1 KEGG: xce:Xcel_2949 trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; PFAM: Trehalose-phosphatase YP_004543217.1 PFAM: ABC transporter-like; transport-associated OB, type 2; KEGG: xce:Xcel_2950 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543218.1 KEGG: xce:Xcel_2951 hypothetical protein YP_004543219.1 KEGG: xce:Xcel_2952 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding YP_004543220.1 TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: xce:Xcel_2953 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR YP_004543221.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: sco:SCO6580 hypothetical protein YP_004543222.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_2956 TetR family transcriptional regulator YP_004543223.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: xce:Xcel_2957 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core YP_004543224.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: xce:Xcel_2958 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004543225.1 PFAM: transcription factor CarD; KEGG: xce:Xcel_2959 CarD family transcriptional regulator YP_004543226.1 KEGG: xce:Xcel_2960 hypothetical protein YP_004543227.1 KEGG: cfl:Cfla_3015 hypothetical protein YP_004543228.1 SMART: ATPase, AAA+ type, core; TIGRFAM: phosphate transport system permease protein 1; KEGG: xce:Xcel_2961 phosphate ABC transporter ATPase subunit; PFAM: ABC transporter-like YP_004543229.1 KEGG: xce:Xcel_2962 phosphate ABC transporter inner membrane subunit PstA; TIGRFAM: phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004543230.1 KEGG: xce:Xcel_2963 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component YP_004543231.1 KEGG: gob:Gobs_4648 phosphate ABC transporter periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004543232.1 KEGG: xce:Xcel_2969 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004543233.1 KEGG: xce:Xcel_2970 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Nucleoside phosphorylase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004543234.1 KEGG: ske:Sked_31900 phosphate uptake regulator PhoU; TIGRFAM: PhoU; PFAM: PhoU YP_004543235.1 PFAM: phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1; HAMAP: phosphoglycerate mutase 1; KEGG: cfl:Cfla_0654 phosphoglycerate mutase 1 family YP_004543236.1 manually curated; KEGG: ami:Amir_4989 hypothetical protein YP_004543237.1 KEGG: xce:Xcel_2973 UDP-N-acetylglucosamine; TIGRFAM: Mycothiol biosynthesis protein, MshA; PFAM: glycosyl transferase, group 1 YP_004543238.1 PFAM: Domain of unknown function DUF2394; KEGG: xce:Xcel_2974 hypothetical protein YP_004543239.1 KEGG: xce:Xcel_2975 hypothetical protein YP_004543240.1 KEGG: xce:Xcel_2976 hypothetical protein YP_004543241.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: xce:Xcel_2977 lysyl-tRNA synthetase YP_004543242.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: cfl:Cfla_0640 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004543243.1 TIGRFAM: L-aspartate oxidase; KEGG: cfl:Cfla_0637 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_004543244.1 PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: jde:Jden_2095 aspartate 1-decarboxylase YP_004543245.1 TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: ske:Sked_32010 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase YP_004543246.1 PFAM: oxidoreductase/dehydrogenase, Rossmann-like domain; Domain of unknown function DUF2520; KEGG: cfl:Cfla_0634 oxidoreductase/dehydrogenase, Rossmann-like domain protein YP_004543247.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: xce:Xcel_2979 membrane-flanked domain-containing protein YP_004543248.1 PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: xce:Xcel_2980 membrane-flanked domain-containing protein YP_004543249.1 KEGG: xce:Xcel_2983 hypothetical protein YP_004543250.1 KEGG: xce:Xcel_2984 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; dihydroneopterin aldolase subgroup; dihydroneopterin aldolase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; dihydroneopterin aldolase YP_004543251.1 TIGRFAM: dihydropteroate synthase; KEGG: xce:Xcel_2985 dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_004543252.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: xce:Xcel_2986 GTP cyclohydrolase I YP_004543253.1 SMART: ATPase, AAA+ type, core; TIGRFAM: peptidase M41, FtsH; KEGG: xce:Xcel_2987 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase, AAA-type, core; peptidase M41, FtsH extracellular YP_004543254.1 TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: xce:Xcel_2988 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004543255.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: xce:Xcel_2989 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop YP_004543256.1 KEGG: xce:Xcel_2990 hypothetical protein; TIGRFAM: uncharacterized protein, coenzyme F420 biosynthesis associated; Protein of unknown function DUF2342; PFAM: Protein of unknown function DUF2342 YP_004543257.1 KEGG: xce:Xcel_2996 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase; TIGRFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C YP_004543258.1 HAMAP: Inorganic pyrophosphatase; KEGG: ske:Sked_32140 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004543259.1 PFAM: NLP/P60; KEGG: xce:Xcel_3000 NLP/P60 protein YP_004543260.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bcv:Bcav_0692 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_004543261.1 PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: xce:Xcel_3002 homoserine O-acetyltransferase YP_004543262.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xce:Xcel_3003 3-demethylubiquinone-9 3-methyltransferase YP_004543263.1 KEGG: sth:STH2027 hypothetical protein YP_004543264.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: xce:Xcel_3006 alcohol dehydrogenase zinc-binding domain-containing protein YP_004543265.1 KEGG: xce:Xcel_3007 hypothetical protein YP_004543266.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: saq:Sare_3303 lysine exporter protein LysE/YggA YP_004543267.1 KEGG: xce:Xcel_3008 hypothetical protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Protein of unknown function DUF77 YP_004543268.1 TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: xce:Xcel_3009 LPPG domain-containing protein containing protein; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_004543269.1 KEGG: xce:Xcel_3010 hypothetical protein; TIGRFAM: Coenzyme F420, CofC; PFAM: Coenzyme F420, CofC YP_004543270.1 PFAM: Nitroreductase-like; KEGG: xce:Xcel_3014 nitroreductase YP_004543271.1 KEGG: xce:Xcel_3016 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG YP_004543272.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cef:CE0059 hypothetical protein YP_004543273.1 KEGG: xce:Xcel_3017 OsmC family protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; PFAM: Peroxiredoxin, OsmC-like protein YP_004543274.1 KEGG: xce:Xcel_3018 hypothetical protein YP_004543275.1 KEGG: xce:Xcel_3019 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_004543276.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: xce:Xcel_3022 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004543277.1 PFAM: L-asparaginase II; KEGG: cfl:Cfla_3083 L-asparaginase II YP_004543278.1 PFAM: Protein of unknown function DUF2516; KEGG: xce:Xcel_3024 hypothetical protein YP_004543279.1 PFAM: PilT protein, N-terminal; KEGG: xce:Xcel_3025 hypothetical protein YP_004543280.1 TIGRFAM: Prevent-host-death protein; KEGG: xce:Xcel_3026 prevent-host-death family protein YP_004543281.1 KEGG: xce:Xcel_3027 hypothetical protein YP_004543282.1 KEGG: xce:Xcel_3028 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: glycine cleavage T-protein, N-terminal YP_004543283.1 KEGG: ske:Sked_04970 hypothetical protein; HAMAP: UPF0678 fatty acid-binding protein-like protein; PFAM: Domain of unknown function DUF1794 YP_004543284.1 KEGG: jde:Jden_0442 hypothetical protein YP_004543285.1 KEGG: fra:Francci3_0454 hypothetical protein YP_004543286.1 KEGG: xce:Xcel_3031 hypothetical protein YP_004543287.1 KEGG: xce:Xcel_3032 hypothetical protein YP_004543288.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: xce:Xcel_3033 YceI family protein YP_004543289.1 KEGG: xce:Xcel_3034 hypothetical protein YP_004543290.1 PFAM: Signal transduction response regulator, C-terminal; KEGG: xce:Xcel_3035 winged helix family two component transcriptional regulator YP_004543291.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: xce:Xcel_3036 alpha/beta hydrolase fold protein YP_004543292.1 SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: xce:Xcel_3037 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif YP_004543293.1 KEGG: xce:Xcel_3038 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp YP_004543294.1 PFAM: Endoribonuclease L-PSP; KEGG: sgr:SGR_738 endoribonuclease YP_004543295.1 PFAM: Endoribonuclease L-PSP; KEGG: xce:Xcel_3039 endoribonuclease L-PSP YP_004543296.1 KEGG: xce:Xcel_3040 hypothetical protein YP_004543297.1 KEGG: xce:Xcel_3041 glycosyl transferase family 51; PFAM: glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_004543298.1 PFAM: Metallophosphoesterase; KEGG: xce:Xcel_3042 metallophosphoesterase YP_004543299.1 KEGG: pjd:Pjdr2_0528 amidase; PFAM: Amidase YP_004543300.1 KEGG: sti:Sthe_3293 amidase; PFAM: Amidase YP_004543301.1 KEGG: xce:Xcel_3061 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004543302.1 KEGG: aai:AARI_30900 hypothetical protein YP_004543303.1 TIGRFAM: DHAP synthase, class 1; KEGG: xce:Xcel_3062 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004543304.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_3063 NUDIX hydrolase YP_004543305.1 KEGG: rxy:Rxyl_1277 peptidase M6, immune inhibitor A; TIGRFAM: M6 metalloprotease; PFAM: peptidase M6, immune inhibitor A YP_004543306.1 PFAM: glutamine amidotransferase class-I, C-terminal; KEGG: xce:Xcel_3327 glutamine amidotransferase YP_004543307.1 PFAM: Bile acid:sodium symporter; KEGG: svi:Svir_20150 Na+-dependent transporter YP_004543308.1 PFAM: ABC-2 type transporter; KEGG: xce:Xcel_3319 ABC-2 type transporter YP_004543309.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_3320 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543310.1 KEGG: xce:Xcel_0284 hypothetical protein YP_004543311.1 TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: xce:Xcel_0283 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding YP_004543312.1 KEGG: xce:Xcel_0282 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT YP_004543313.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: nca:Noca_2593 hypothetical protein YP_004543314.1 PFAM: Protein of unknown function DUF81; KEGG: bcv:Bcav_0553 protein of unknown function DUF81 YP_004543315.1 KEGG: xce:Xcel_0273 hypothetical protein YP_004543316.1 SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: xce:Xcel_0272 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR YP_004543317.1 KEGG: bcv:Bcav_1588 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004543318.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: bcv:Bcav_1587 histidine kinase YP_004543319.1 PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1586 ABC-2 type transporter YP_004543320.1 PFAM: ABC transporter-like; KEGG: bcv:Bcav_1585 ABC transporter related; SMART: ATPase, AAA+ type, core YP_004543321.1 PFAM: NUDIX hydrolase domain; KEGG: kfl:Kfla_3222 NUDIX hydrolase YP_004543322.1 PFAM: Protein of unknown function DUF2174, N-terminal; KEGG: nda:Ndas_1787 hypothetical protein YP_004543323.1 PFAM: Beta-lactamase-related; KEGG: xce:Xcel_0255 beta-lactamase YP_004543324.1 KEGG: sgr:SGR_6942 large multi-functional protein; PFAM: Protein of unknown function DUF1080; PA14; carbohydrate binding domain, family 6; SMART: PA14 YP_004543325.1 PFAM: NUDIX hydrolase domain; KEGG: msm:MSMEG_4488 hydrolase, NUDIX family protein YP_004543326.1 TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: xce:Xcel_0254 DNA polymerase III subunits gamma and tau; SMART: ATPase, AAA+ type, core YP_004543327.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0251 binding-protein-dependent transport systems inner membrane component YP_004543328.1 PFAM: ABC transporter-like; NIL domain; KEGG: xce:Xcel_0250 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543329.1 PFAM: NLPA lipoprotein; KEGG: xce:Xcel_0249 NlpA lipoprotein YP_004543330.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: cfl:Cfla_0462 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase YP_004543331.1 PFAM: Sporulation protein YtfJ; KEGG: hut:Huta_1637 hypothetical protein YP_004543332.1 PFAM: glycoside hydrolase, family 35; KEGG: ami:Amir_2576 beta-galactosidase YP_004543333.1 KEGG: xce:Xcel_0236 glycoside hydrolase family 6; PFAM: 1, 4-beta cellobiohydrolase YP_004543334.1 KEGG: xce:Xcel_0235 hypothetical protein YP_004543335.1 KEGG: xce:Xcel_0234 hypothetical protein YP_004543336.1 KEGG: ske:Sked_04620 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease YP_004543337.1 KEGG: bcv:Bcav_0109 luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase-predicted, Rv1855c; PFAM: Luciferase-like, subgroup YP_004543338.1 KEGG: xce:Xcel_0229 hypothetical protein YP_004543339.1 KEGG: xce:Xcel_0228 hypothetical protein YP_004543340.1 PFAM: transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xce:Xcel_0227 TetR family transcriptional regulator YP_004543341.1 KEGG: rmu:RMDY18_11690 nicotinamide mononucleotide transporter; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_004543343.1 KEGG: xce:Xcel_0223 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA oxidase/dehydrogenase, type 1; acyl-CoA dehydrogenase, N-terminal; acyl-CoA oxidase/dehydrogenase, central region YP_004543344.1 KEGG: xce:Xcel_1389 NUDIX hydrolase; manually curated; PFAM: NUDIX hydrolase domain YP_004543345.1 KEGG: xce:Xcel_0222 Mn2+/Fe2+ transporter, NRAMP family; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein YP_004543346.1 KEGG: xce:Xcel_0221 hypothetical protein YP_004543347.1 PFAM: glycosyl transferase, group 1; KEGG: xce:Xcel_0220 glycosyl transferase group 1 protein YP_004543348.1 PFAM: glycosyl transferase, group 1; KEGG: amd:AMED_0515 glycosyl transferase YP_004543349.1 KEGG: bcv:Bcav_3684 LPXTG-motif cell wall anchor domain protein YP_004543350.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sco:SCO0418 DNA-binding protein YP_004543351.1 KEGG: nfa:nfa27990 hypothetical protein YP_004543352.1 PFAM: peptidase S51, dipeptidase E; KEGG: gym:GYMC10_3227 peptidase S51 dipeptidase E YP_004543353.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sna:Snas_0430 alpha/beta hydrolase fold protein YP_004543354.1 KEGG: gob:Gobs_0852 hypothetical protein YP_004543355.1 KEGG: cyj:Cyan7822_0580 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_004543356.1 PFAM: transposase IS3/IS911; KEGG: gob:Gobs_2596 transposase IS3/IS911 family protein YP_004543357.1 PFAM: transposase IS3/IS911; KEGG: mav:MAV_5035 ISAfe7, transposase OrfA YP_004543358.1 PFAM: Haemolysin-type calcium-binding region; KEGG: kfl:Kfla_0735 RTX toxins and related Ca2+-binding protein-like protein YP_004543359.1 KEGG: xce:Xcel_0217 silent information regulator protein Sir2; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2 YP_004543360.1 PFAM: FAD dependent oxidoreductase; KEGG: xce:Xcel_0214 FAD dependent oxidoreductase YP_004543361.1 KEGG: bcv:Bcav_1630 transglutaminase domain protein YP_004543362.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: xce:Xcel_0208 CMP/dCMP deaminase zinc-binding protein YP_004543363.1 KEGG: xce:Xcel_0207 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: phosphoribosyltransferase YP_004543364.1 KEGG: xce:Xcel_0206 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004543365.1 KEGG: xce:Xcel_0205 hypothetical protein YP_004543366.1 PFAM: Protein of unknown function DUF1540; KEGG: xce:Xcel_1390 hypothetical protein YP_004543367.1 KEGG: xce:Xcel_0204 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_004543368.1 KEGG: xce:Xcel_0203 chaperone DnaJ domain-containing protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal YP_004543369.1 KEGG: xce:Xcel_0202 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor YP_004543370.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: xce:Xcel_0201 chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004543371.1 KEGG: ddr:Deide_2p00510 trypsin-like serine protease; PFAM: peptidase S1/S6, chymotrypsin/Hap; SMART: peptidase S1/S6, chymotrypsin/Hap YP_004543372.1 PFAM: O-methyltransferase, family 3; KEGG: kse:Ksed_01450 O-methyltransferase YP_004543373.1 KEGG: cfl:Cfla_3457 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004543374.1 KEGG: cmi:CMM_2099 hypothetical protein YP_004543375.1 KEGG: sro:Sros_3496 mannitol dehydrogenase-like protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal YP_004543376.1 PFAM: sugar-binding region; KEGG: apn:Asphe3_10240 transcriptional regulator with sigma factor-related N-terminal domain YP_004543377.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: sen:SACE_4162 ABC sugar transporter, substrate-binding component YP_004543378.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nda:Ndas_4000 binding-protein-dependent transporters inner membrane component YP_004543379.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_25010 ABC transporter permease protein YP_004543380.1 KEGG: xce:Xcel_0194 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004543381.1 KEGG: mmh:Mmah_0445 hypothetical protein YP_004543382.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: bcv:Bcav_4090 leucyl-tRNA synthetase YP_004543383.1 KEGG: xce:Xcel_0193 hypothetical protein YP_004543384.1 PFAM: peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: nml:Namu_0756 peptidase M1 membrane alanine aminopeptidase YP_004543385.1 PFAM: UspA; KEGG: xce:Xcel_0192 UspA domain-containing protein YP_004543386.1 KEGG: xce:Xcel_0191 GAF sensor signal transduction histidine kinase; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: GAF; ATP-binding region, ATPase-like YP_004543387.1 KEGG: xce:Xcel_0190 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004543388.1 KEGG: xce:Xcel_0188 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4 YP_004543389.1 KEGG: cfl:Cfla_3049 glycoside hydrolase family 3 domain protein; PFAM: glycoside hydrolase, family 3, N-terminal; glycoside hydrolase, family 3, C-terminal YP_004543390.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aai:AARI_02000 xylobiose ABC transporter inner membrane subunit BxlG YP_004543391.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aai:AARI_01990 xylobiose ABC transporter inner membrane subunit BxlF YP_004543392.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: xce:Xcel_0185 extracellular solute-binding protein family 1 protein YP_004543393.1 KEGG: cfl:Cfla_1125 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004543395.1 KEGG: kfl:Kfla_0268 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004543396.1 KEGG: nca:Noca_2007 ATPase domain-containing protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain YP_004543397.1 PFAM: Aminoglycoside phosphotransferase; KEGG: xce:Xcel_3317 aminoglycoside phosphotransferase YP_004543398.1 KEGG: bpl:BURPS1106A_1463 lipoprotein YP_004543399.1 KEGG: pon:100461715 hypothetical protein LOC100461715 YP_004543400.1 KEGG: cfl:Cfla_0515 hypothetical protein YP_004543401.1 HAMAP: phosphoglucose isomerase (PGI); KEGG: xce:Xcel_0183 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004543402.1 KEGG: tcu:Tcur_2216 hypothetical protein YP_004543403.1 PFAM: ABC transporter-like; KEGG: xce:Xcel_0180 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543404.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0179 binding-protein-dependent transport systems inner membrane component YP_004543405.1 KEGG: bcv:Bcav_3809 ABC transporter, periplasmic binding protein, ThiB subfamily; TIGRFAM: Thiamine ABC transporter periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_004543406.1 KEGG: xce:Xcel_0177 hypothetical protein YP_004543407.1 PFAM: PAS fold-3; KEGG: xce:Xcel_1403 ANTAR domain-containing protein with unknown sensor YP_004543408.1 KEGG: cfl:Cfla_0463 hypothetical protein YP_004543409.1 PFAM: carbamoyltransferase; KEGG: gob:Gobs_4975 carbamoyltransferase YP_004543410.1 PFAM: Protein of unknown function DUF2071; KEGG: sus:Acid_1638 hypothetical protein YP_004543411.1 PFAM: Protein of unknown function DUF81; KEGG: gob:Gobs_1272 hypothetical protein YP_004543412.1 KEGG: sma:SAV_5757 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2; PFAM: transcriptional regulator, Rrf2 YP_004543413.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: ske:Sked_10140 N-acyl-D-glucosamine 2-epimerase YP_004543414.1 KEGG: ske:Sked_05050 sodium/proline symporter; TIGRFAM: Sodium/proline symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter YP_004543415.1 PFAM: Protein of unknown function, ATP binding; KEGG: xce:Xcel_0174 hypothetical protein YP_004543416.1 PFAM: Protein of unknown function DUF742; KEGG: xce:Xcel_0173 hypothetical protein YP_004543417.1 PFAM: Dynein light chain-related; KEGG: xce:Xcel_0172 roadblock/LC7 family protein YP_004543418.1 KEGG: xce:Xcel_0171 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like YP_004543419.1 PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; manually curated; KEGG: xce:Xcel_0170 cyclic nucleotide-binding protein; TIGRFAM: Quinone oxidoreductase , PIG3 YP_004543420.1 PFAM: Protein of unknown function DUF2587; KEGG: xce:Xcel_0169 hypothetical protein YP_004543421.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: xce:Xcel_3232 hypothetical protein YP_004543422.1 PFAM: Protein of unknown function DUF805; KEGG: xce:Xcel_3234 hypothetical protein YP_004543423.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_01770 carbohydrate ABC transporter membrane protein YP_004543424.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ske:Sked_01760 carbohydrate ABC transporter membrane protein YP_004543425.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: xce:Xcel_3237 extracellular solute-binding protein family 1 protein YP_004543426.1 TIGRFAM: peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: xce:Xcel_3238 methionine aminopeptidase; PFAM: peptidase M24, structural domain YP_004543427.1 KEGG: xce:Xcel_3241 HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_004543428.1 PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: xce:Xcel_3242 seryl-tRNA synthetase YP_004543429.1 KEGG: xce:Xcel_3243 diacylglycerol kinase catalytic subunit; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region YP_004543430.1 KEGG: xce:Xcel_3244 hypothetical protein YP_004543431.1 PFAM: glycosyl transferase, family 2; KEGG: xce:Xcel_3245 glycosyl transferase family 2 protein YP_004543432.1 KEGG: xce:Xcel_3246 hypothetical protein YP_004543433.1 KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming; TIGRFAM: LPXTG-motif cell wall anchor; PFAM: Gram-positive anchor YP_004543435.1 TIGRFAM: LPXTG-motif cell wall anchor; KEGG: spu:588657 hypothetical LOC588657 YP_004543436.1 PFAM: Ppx/GppA phosphatase; KEGG: xce:Xcel_3233 Ppx/GppA phosphatase YP_004543437.1 HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: ske:Sked_36020 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_004543438.1 KEGG: xce:Xcel_3249 uroporphyrinogen decarboxylase; manually curated; TIGRFAM: Uroporphyrinogen decarboxylase HemE; PFAM: Uroporphyrinogen decarboxylase (URO-D); HAMAP: Uroporphyrinogen decarboxylase HemE YP_004543439.1 PFAM: Amine oxidase; KEGG: xce:Xcel_3250 FAD dependent oxidoreductase YP_004543440.1 TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: xce:Xcel_3252 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YP_004543441.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: ske:Sked_36060 uroporphyrinogen-III synthase YP_004543442.1 KEGG: xce:Xcel_3254 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase YP_004543443.1 PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: glutamate-1-semialdehyde 2,1-aminomutase; KEGG: xce:Xcel_3255 glutamate-1-semialdehyde-2,1-aminomutase YP_004543445.1 KEGG: cfl:Cfla_2990 hypothetical protein YP_004543449.1 KEGG: apn:Asphe3_05530 carboxypeptidase; PFAM: peptidase M14, carboxypeptidase A; SMART: peptidase M14, carboxypeptidase A YP_004543450.1 PFAM: Protein of unknown function DUF156; KEGG: xce:Xcel_3257 hypothetical protein YP_004543451.1 PFAM: Heavy metal transport/detoxification protein; KEGG: xce:Xcel_3258 heavy metal transport/detoxification protein YP_004543452.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: ske:Sked_36160 copper/silver-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase YP_004543453.1 PFAM: ABC-2 type transporter; KEGG: ske:Sked_36170 multidrug ABC transporter permease YP_004543454.1 PFAM: ABC transporter-like; KEGG: ske:Sked_36180 multidrug ABC transporter ATPase; SMART: ATPase, AAA+ type, core YP_004543455.1 PFAM: HTH transcriptional regulator, ArsR; KEGG: ske:Sked_36190 hypothetical protein YP_004543456.1 PFAM: Abortive infection protein; KEGG: xce:Xcel_3260 abortive infection protein YP_004543457.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: xce:Xcel_3261 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_004543458.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_3262 binding-protein-dependent transport systems inner membrane component YP_004543459.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_3263 binding-protein-dependent transport systems inner membrane component YP_004543460.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: xce:Xcel_3264 extracellular solute-binding protein family 5 protein YP_004543461.1 KEGG: xce:Xcel_3265 hypothetical protein YP_004543462.1 KEGG: xce:Xcel_3268 histone family protein DNA-binding protein; PFAM: histone-like bacterial DNA-binding protein; SMART: histone-like bacterial DNA-binding protein YP_004543463.1 PFAM: NUDIX hydrolase domain; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; HAMAP: Isopentenyl-diphosphate Delta-isomerase; KEGG: bfa:Bfae_04480 isopentenyl-diphosphate delta-isomerase YP_004543464.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sgr:SGR_5554 major facilitator superfamily permease YP_004543465.1 PFAM: Copper resistance protein CopC, core; KEGG: xce:Xcel_3270 copper resistance protein CopC YP_004543466.1 TIGRFAM: NAD+ synthase; KEGG: xce:Xcel_3271 NAD(+) synthase (glutamine-hydrolyzing); PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004543467.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; transporter-associated region; KEGG: xce:Xcel_2793 hypothetical protein YP_004543468.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: xce:Xcel_2794 hypothetical protein YP_004543469.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; transporter-associated region; KEGG: jde:Jden_0148 protein of unknown function DUF21 YP_004543471.1 PFAM: Penicillin-binding protein, transpeptidase; KEGG: xce:Xcel_3275 penicillin-binding protein transpeptidase YP_004543472.1 PFAM: peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: mts:MTES_1148 D-alanyl-D-alanine carboxypeptidase YP_004543473.1 KEGG: sco:SCO0731 transferase; PFAM: Aminotransferase, class I/II YP_004543474.1 KEGG: xce:Xcel_3276 hypothetical protein YP_004543476.1 KEGG: xce:Xcel_3277 LuxR family transcriptional regulator; PFAM: transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; SMART: transcription regulator LuxR, C-terminal YP_004543477.1 KEGG: xce:Xcel_3278 protein serine phosphatase with GAF(s) sensor(s); PFAM: Sporulation stage II, protein E C-terminal; GAF; ATP-binding region, ATPase-like; SMART: Protein phosphatase 2C-related; GAF YP_004543478.1 KEGG: xce:Xcel_3279 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-G type, actinobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_004543479.1 KEGG: xce:Xcel_3281 camphor resistance CrcB protein; HAMAP: CrcB-like protein; PFAM: Camphor resistance CrcB protein YP_004543480.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: xce:Xcel_3282 camphor resistance CrcB protein; PFAM: Camphor resistance CrcB protein YP_004543481.1 KEGG: xce:Xcel_3280 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2 YP_004543482.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: req:REQ_35340 glyoxalase family protein YP_004543483.1 HAMAP: phosphoenolpyruvate carboxylase; KEGG: xce:Xcel_3285 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase YP_004543484.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: xce:Xcel_3286 NAD-dependent epimerase/dehydratase YP_004543485.1 PFAM: CopG-like DNA-binding; KEGG: rha:RHA1_ro03198 hypothetical protein YP_004543486.1 KEGG: rop:ROP_pROB01-04710 hypothetical protein YP_004543487.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_243 acetyltransferase YP_004543488.1 KEGG: xce:Xcel_3287 transmembrane anti-sigma factor YP_004543489.1 KEGG: xce:Xcel_3288 ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4 YP_004543490.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: xce:Xcel_3289 YceI family protein YP_004543491.1 KEGG: xce:Xcel_3290 hypothetical protein YP_004543492.1 KEGG: ske:Sked_21390 phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_004543493.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: xce:Xcel_3293 xylose isomerase domain-containing protein; SMART: Endodeoxyribonuclease IV YP_004543494.1 KEGG: xce:Xcel_0759 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; transcription regulator LuxR, C-terminal YP_004543495.1 PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: xce:Xcel_0760 histidine kinase YP_004543496.1 KEGG: ica:Intca_0184 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004543497.1 KEGG: xce:Xcel_0762 hypothetical protein YP_004543498.1 KEGG: cfl:Cfla_2957 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A YP_004543500.1 PFAM: transcriptional regulator PadR N-terminal-like; KEGG: ske:Sked_00550 transcriptional regulator YP_004543501.1 PFAM: Pyrrolo-quinoline quinone repeat; KEGG: xce:Xcel_3294 hypothetical protein YP_004543502.1 KEGG: xce:Xcel_3294 hypothetical protein YP_004543503.1 PFAM: Protein of unknown function DUF606; KEGG: mil:ML5_1112 hypothetical protein YP_004543504.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: kfl:Kfla_0716 cyclase/dehydrase YP_004543505.1 PFAM: LVIVD; KEGG: mil:ML5_4974 lvivd repeat-containing protein YP_004543506.1 PFAM: Protein of unknown function DUF305; KEGG: sro:Sros_1394 hypothetical protein YP_004543507.1 PFAM: Abortive infection protein; KEGG: ske:Sked_18380 CAAX amino terminal protease family YP_004543508.1 KEGG: xce:Xcel_0873 hypothetical protein YP_004543509.1 PFAM: Protein of unknown function DUF664; KEGG: saq:Sare_2899 hypothetical protein YP_004543510.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xce:Xcel_3298 hypothetical protein YP_004543511.1 TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumB; KEGG: xce:Xcel_3299 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase YP_004543512.1 KEGG: cfl:Cfla_0141 peptidase M28; PFAM: peptidase M28; Protease-associated PA YP_004543513.1 PFAM: RNA polymerase sigma factor 70, region 4 type 2; KEGG: xce:Xcel_3302 hypothetical protein YP_004543514.1 KEGG: ach:Achl_1150 transglycosylase-associated protein YP_004543515.1 KEGG: xce:Xcel_3303 ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin YP_004543516.1 PFAM: Amidinotransferase; KEGG: xce:Xcel_3304 amidinotransferase YP_004543517.1 KEGG: xce:Xcel_3305 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type, C-terminal; SMART: transcription regulator, AsnC-type YP_004543518.1 KEGG: bcv:Bcav_0050 hypothetical protein YP_004543519.1 KEGG: nca:Noca_2321 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase YP_004543520.1 KEGG: ske:Sked_37260 hypothetical protein YP_004543521.1 KEGG: amd:AMED_1213 methylated-DNA-[protein]-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_004543522.1 KEGG: ica:Intca_2231 protein of unknown function DUF255 YP_004543523.1 PFAM: Protein of unknown function DUF1877; KEGG: mil:ML5_4023 hypothetical protein YP_004543524.1 KEGG: apn:Asphe3_32440 lysophospholipase L1-like esterase YP_004543525.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: cfl:Cfla_1155 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004543526.1 PFAM: YCII-related; KEGG: sma:SAV_960 hypothetical protein YP_004543527.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xce:Xcel_0184 GCN5-related N-acetyltransferase YP_004543528.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dpt:Deipr_1622 GCN5-related N-acetyltransferase YP_004543529.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cai:Caci_7727 GCN5-related N-acetyltransferase YP_004543530.1 PFAM: Conserved TM helix; KEGG: aai:AARI_21890 hypothetical protein YP_004543532.1 KEGG: fre:Franean1_4201 alpha/beta hydrolase domain-containing protein YP_004543533.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cmi:CMM_1510 hydrolase YP_004543534.1 KEGG: ske:Sked_05660 hypothetical protein YP_004543535.1 KEGG: apn:Asphe3_41010 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004543536.1 PFAM: Cation efflux protein; KEGG: ica:Intca_2655 cation efflux protein YP_004543537.1 KEGG: xce:Xcel_3334 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004543538.1 KEGG: ach:Achl_3109 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_004543541.1 TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mjl:Mjls_4547 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase YP_004543542.1 KEGG: aau:AAur_pTC10129 cobalt-zinc-cadmium efflux permease; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_004543543.1 KEGG: ckp:ckrop_0446 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_004543544.1 KEGG: xce:Xcel_2416 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004543545.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: jde:Jden_0078 sulphate transporter YP_004543546.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: gbr:Gbro_0593 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004543547.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: fri:FraEuI1c_0838 TRAP transporter solute receptor, TAXI family YP_004543548.1 KEGG: fri:FraEuI1c_0836 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region YP_004543549.1 KEGG: sen:SACE_2833 two-component system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region YP_004543550.1 KEGG: nda:Ndas_0164 LPXTG-motif cell wall anchor domain protein; TIGRFAM: LPXTG-motif cell wall anchor; PFAM: Gram-positive anchor YP_004543551.1 KEGG: sma:SAV_4444 hypothetical protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_004543552.1 PFAM: FAD linked oxidase, N-terminal; Luciferase-like, subgroup; Berberine/berberine-like; KEGG: xce:Xcel_0376 FAD linked oxidase domain-containing protein YP_004543553.1 KEGG: nda:Ndas_2764 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_004543554.1 KEGG: ske:Sked_03050 beta-xylosidase; PFAM: glycoside hydrolase, family 43 YP_004543555.1 KEGG: gob:Gobs_1826 superfamily I DNA and RNA helicase YP_004543556.1 KEGG: svi:Svir_11080 glucose/sorbosone dehydrogenase; PFAM: PKD; carbohydrate binding domain, family 6; SMART: PKD; Cellulose binding, type IV; LamG-like jellyroll fold YP_004543557.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: nda:Ndas_4059 xylose isomerase YP_004543558.1 KEGG: tro:trd_A0080 ABC-type branched-chain amino acid transport systems ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_004543559.1 PFAM: ABC transporter-like; KEGG: nwi:Nwi_0668 ABC-type branched-chain amino acid transport systems ATPase component; SMART: ATPase, AAA+ type, core YP_004543560.1 PFAM: Extracellular ligand-binding receptor; KEGG: tro:trd_A0082 ABC-type branched-chain amino acid transport systems periplasmic component YP_004543561.1 PFAM: Bacterial inner-membrane translocator; KEGG: tro:trd_A0083 ABC transporter ATP-binding protein YP_004543562.1 PFAM: Bacterial inner-membrane translocator; KEGG: apb:SAR116_1788 ABC transporter ATP-binding protein YP_004543563.1 PFAM: Oxidoreductase, N-terminal; KEGG: bcv:Bcav_0808 oxidoreductase domain protein YP_004543564.1 KEGG: bcv:Bcav_0800 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain YP_004543565.1 KEGG: xce:Xcel_3350 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal YP_004543566.1 KEGG: bcv:Bcav_4176 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE YP_004543567.1 KEGG: xce:Xcel_1897 hypothetical protein YP_004543568.1 TIGRFAM: ribosomal protein L9, bacteria/chloroplast; HAMAP: ribosomal protein L9, bacteria/chloroplast; KEGG: cfl:Cfla_3697 ribosomal protein L9; PFAM: ribosomal protein L9, C-terminal; ribosomal protein L9, N-terminal YP_004543569.1 TIGRFAM: ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: cfl:Cfla_3698 ribosomal protein S18; PFAM: ribosomal protein S18 YP_004543570.1 KEGG: xce:Xcel_3354 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_004543571.1 TIGRFAM: ribosomal protein S6; HAMAP: ribosomal protein S6, bacterial-like; KEGG: xce:Xcel_3355 30S ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like YP_004543572.1 PFAM: glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PASTA; KEGG: xce:Xcel_3357 glycosyl transferase family 51; SMART: PASTA YP_004543573.1 PFAM: transcriptional regulator PadR N-terminal-like; KEGG: xce:Xcel_3358 PadR-like family transcriptional regulator YP_004543574.1 KEGG: xce:Xcel_3359 inositol 1-phosphate synthase; TIGRFAM: Myo-inositol 1-phosphate synthase, actinobacteria; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like YP_004543575.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bcv:Bcav_4203 major facilitator superfamily MFS_1 YP_004543576.1 KEGG: xce:Xcel_3361 EmrB/QacA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_004543577.1 TIGRFAM: tRNA adenylyltransferase; HDIG; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: xce:Xcel_3362 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region YP_004543578.1 PFAM: NUDIX hydrolase domain; KEGG: xce:Xcel_3363 NUDIX hydrolase YP_004543579.1 KEGG: xce:Xcel_3364 hypothetical protein YP_004543580.1 KEGG: xce:Xcel_3365 virulence factor MviN family protein; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN YP_004543581.1 KEGG: xce:Xcel_3367 hypothetical protein YP_004543582.1 TIGRFAM: Thioredoxin reductase; KEGG: xce:Xcel_3368 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004543583.1 KEGG: xce:Xcel_3369 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain YP_004543584.1 KEGG: xce:Xcel_3370 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II YP_004543585.1 HAMAP: D-alanine--D-alanine ligase; KEGG: xce:Xcel_3371 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal YP_004543586.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: xce:Xcel_3372 ParB-like partition protein; SMART: ParB-like nuclease YP_004543587.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: xce:Xcel_3373 cobyrinic acid ac-diamide synthase YP_004543588.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: xce:Xcel_3374 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G YP_004543589.1 KEGG: xce:Xcel_3375 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H YP_004543590.1 KEGG: xce:Xcel_3376 60 kDa inner membrane insertion protein; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; PFAM: Membrane insertion protein, OxaA/YidC YP_004543591.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: xce:Xcel_3377 hypothetical protein; PFAM: Protein of unknown function DUF37 YP_004543592.1 KEGG: cfl:Cfla_3729 ribonuclease P protein component; TIGRFAM: ribonuclease P; PFAM: ribonuclease P YP_004543593.1 TIGRFAM: ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: nml:Namu_5415 50S ribosomal protein L34; PFAM: ribosomal protein L34