-- dump date 20140619_115454 -- class Genbank::CDS -- table cds_note -- id note YP_003754150.1 SMART: rhodanese; KEGG: pla:Plav_0002 rhodanese YP_003754151.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bbt:BBta_0001 chromosomal replication initiation protein; SMART: replication initiation factor DnaA; ATPase AAA YP_003754152.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III subunit beta; KEGG: nwi:Nwi_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_003754153.1 KEGG: rpb:RPB_1094 hypothetical protein; manually curated; PFAM: protein of unknown function DUF559 YP_003754154.1 PFAM: SMC domain protein; KEGG: mes:Meso_0003 recombination protein F YP_003754155.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase subunit beta; KEGG: rpe:RPE_0005 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003754156.1 manually curated; KEGG: azc:AZC_3917 hypothetical protein YP_003754157.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mno:Mnod_5461 sodium/hydrogen exchanger YP_003754158.1 KEGG: pla:Plav_0008 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003754159.1 PFAM: protein of unknown function DUF45; KEGG: azc:AZC_4690 hypothetical protein YP_003754160.1 PFAM: electron transporter SCO1/SenC; KEGG: pla:Plav_0014 classical-complement-pathway C3/C5 convertase YP_003754161.1 KEGG: mlo:mlr5307 two-component, sensor histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003754162.1 KEGG: pla:Plav_0018 two component Fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003754163.1 PFAM: protein of unknown function DUF1052; KEGG: msl:Msil_2157 protein of unknown function DUF1052 YP_003754164.1 KEGG: ade:Adeh_1447 ATP-dependent protease YP_003754165.1 KEGG: msm:MSMEG_3091 ribose transport ATP-binding protein RbsA YP_003754166.1 PFAM: protein of unknown function DUF344; KEGG: atc:AGR_C_733 hypothetical protein YP_003754167.1 PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator YP_003754168.1 KEGG: azc:AZC_4028 acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003754169.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: pla:Plav_0403 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003754170.1 PFAM: Hsp33 protein; KEGG: bbt:BBta_0761 HSP33-like chaperonin YP_003754171.1 KEGG: cak:Caul_3284 signal transduction protein YP_003754172.1 KEGG: bmj:BMULJ_06091 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_003754173.1 PFAM: ApaG domain protein; KEGG: oan:Oant_0397 ApaG YP_003754174.1 KEGG: azc:AZC_4021 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003754175.1 PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: bra:BRADO6769 2'-deoxycytidine 5'-triphosphate deaminase YP_003754176.1 PFAM: protein of unknown function DUF1428; KEGG: mlo:mlr2642 hypothetical protein YP_003754177.1 KEGG: rpt:Rpal_3302 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003754178.1 KEGG: sme:SMc01096 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003754179.1 KEGG: ccs:CCNA_03724 hypothetical protein YP_003754180.1 KEGG: mch:Mchl_1853 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_003754181.1 KEGG: glo:Glov_1412 hypothetical protein YP_003754182.1 PFAM: redoxin; KEGG: pla:Plav_1603 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003754183.1 KEGG: mno:Mnod_7298 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003754184.1 KEGG: bja:bsr1382 hypothetical protein YP_003754185.1 KEGG: mno:Mnod_1682 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003754186.1 KEGG: met:M446_4081 hypothetical protein YP_003754187.1 KEGG: mpo:Mpop_1706 hypothetical protein YP_003754188.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pla:Plav_1268 LysR family transcriptional regulator YP_003754189.1 KEGG: atc:AGR_C_1196 hypothetical protein YP_003754190.1 KEGG: cvi:CV_0172 poly (3-hydroxybutyrate) depolymerase YP_003754191.1 KEGG: mno:Mnod_1733 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein YP_003754192.1 PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin 2; KEGG: bja:blr4438 hypothetical protein YP_003754193.1 KEGG: gem:GM21_1811 response regulator receiver modulated metal dependent phosphohydrolase YP_003754194.1 KEGG: hba:Hbal_2923 hypothetical protein YP_003754195.1 PFAM: glycosyl transferase family 51; KEGG: hth:HTH_0112 penicillin-binding protein YP_003754196.1 SMART: ATPase AAA; KEGG: scl:sce7121 hypothetical protein YP_003754197.1 KEGG: mxa:MXAN_1592 hypothetical protein YP_003754198.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_4591 allergen V5/TPX-1 family protein YP_003754199.1 PFAM: polysaccharide biosynthesis protein; KEGG: rpd:RPD_1391 polysaccharide biosynthesis protein YP_003754200.1 KEGG: scb:SCAB_38741 pyridoxal-5'-phosphate dependent aminotransferase YP_003754201.1 KEGG: mva:Mvan_1255 hypothetical protein YP_003754202.1 KEGG: rpb:RPB_1345 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_003754203.1 KEGG: cwo:Cwoe_3291 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003754204.1 PFAM: aldo/keto reductase; KEGG: ddr:Deide_07880 oxidoreductase YP_003754205.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpe:RPE_1496 hypothetical protein YP_003754206.1 KEGG: mth:MTH1780 stomatin-like protein; PFAM: band 7 protein; SMART: band 7 protein YP_003754207.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ccs:CCNA_01734 MarC family integral membrane protein YP_003754208.1 PFAM: NUDIX hydrolase; KEGG: pla:Plav_2217 NUDIX hydrolase YP_003754209.1 PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_2584 monooxygenase, FAD-binding YP_003754210.1 PFAM: protein of unknown function DUF2327; KEGG: rpd:RPD_3291 hypothetical protein YP_003754211.1 PFAM: alpha/beta hydrolase fold; KEGG: met:M446_6949 alpha/beta hydrolase fold YP_003754212.1 PFAM: Extensin family protein; KEGG: xau:Xaut_1728 extensin family protein YP_003754213.1 PFAM: regulatory protein TetR; KEGG: bra:BRADO1168 TetR family transcriptional regulator YP_003754214.1 KEGG: xau:Xaut_3071 hypothetical protein YP_003754215.1 KEGG: xau:Xaut_3071 hypothetical protein YP_003754216.1 KEGG: mno:Mnod_4909 protein of unknown function DUF1332; PFAM: protein of unknown function DUF1332; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003754217.1 KEGG: azc:AZC_4549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; peptidoglycan-binding protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003754218.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: lhk:LHK_01973 sulfatase YP_003754219.1 PFAM: pentapeptide repeat protein; KEGG: gbe:GbCGDNIH1_1873 pentapeptide repeat-containing protein YP_003754220.1 KEGG: mpo:Mpop_3271 conserved hypothetical protein; exported protein YP_003754221.1 KEGG: pvx:PVX_079910 hypothetical protein YP_003754222.1 KEGG: ppp:PHYPADRAFT_85626 hypothetical protein YP_003754223.1 PFAM: protein of unknown function DUF2478; KEGG: oca:OCAR_6130 hypothetical protein YP_003754224.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bmr:BMI_I1785 ferredoxin A YP_003754225.1 KEGG: cvi:CV_1829 sulfate transporter permease protein CysW YP_003754226.1 KEGG: azc:AZC_1368 ABC transporter periplasmic substrate-binding protein YP_003754227.1 KEGG: azc:AZC_1369 transcriptional regulatory protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator YP_003754228.1 KEGG: pau:PA14_26165 hypothetical protein YP_003754229.1 PFAM: amino acid permease-associated region; KEGG: azc:AZC_1370 amino acid transporter permease YP_003754230.1 KEGG: azc:AZC_1371 hypothetical protein YP_003754231.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: ara:Arad_8374 ferredoxin protein YP_003754232.1 KEGG: ret:RHE_PE00412 hypothetical protein YP_003754233.1 PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: xau:Xaut_3187 glycine cleavage T protein (aminomethyl transferase) YP_003754234.1 PFAM: globin; KEGG: rde:RD1_4240 globin-like protein YP_003754235.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmr:BMI_II478 glyoxalase YP_003754236.1 PFAM: peptidase M23; KEGG: vpa:VP0548 ToxR-activated protein TagE YP_003754237.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: vei:Veis_2444 4'-phosphopantetheinyl transferase YP_003754238.1 KEGG: dma:DMR_01570 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; transferase hexapeptide repeat containing protein YP_003754239.1 KEGG: oca:OCAR_7002 hypothetical protein YP_003754240.1 KEGG: mes:Meso_0777 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003754241.1 PFAM: protein of unknown function DUF839; KEGG: oan:Oant_4449 hypothetical protein YP_003754242.1 PFAM: aminoglycoside phosphotransferase; KEGG: mlo:mll6593 hypothetical protein YP_003754243.1 KEGG: pzu:PHZ_c0640 cold-shock DNA-binding domain protein YP_003754244.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: msl:Msil_1827 alcohol dehydrogenase GroES domain protein YP_003754245.1 KEGG: tgr:Tgr7_1944 flavin reductase domain protein FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_003754246.1 KEGG: stp:Strop_0115 chaperone protein DnaJ YP_003754247.1 KEGG: rpe:RPE_3798 PAS/PAC sensor protein YP_003754248.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpo:Mpop_5160 NAD-dependent epimerase/dehydratase YP_003754249.1 KEGG: pla:Plav_1923 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003754250.1 KEGG: tgr:Tgr7_2287 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; chemotaxis sensory transducer YP_003754251.1 KEGG: bph:Bphy_5922 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003754252.1 KEGG: rhi:NGR_c23560 formate-tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS YP_003754253.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: rma:Rmag_0886 polysaccharide biosynthesis protein CapD YP_003754254.1 PFAM: integrase family protein; O-antigen polymerase; KEGG: mch:Mchl_4758 integrase family protein YP_003754255.1 KEGG: dsh:Dshi_0989 hypothetical protein YP_003754256.1 KEGG: vex:VEA_001988 fatty oxidation complex alpha subunit FadB YP_003754257.1 KEGG: bgl:bglu_1g21240 P42.1; manually curated; PFAM: Pathogenesis-related transcriptional factor and ERF protein; HNH endonuclease YP_003754258.1 KEGG: aco:Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003754259.1 KEGG: cyb:CYB_1946 hypothetical protein YP_003754261.1 KEGG: bfo:BRAFLDRAFT_67299 hypothetical protein YP_003754262.1 manually curated; KEGG: pkn:PKH_123140 splicing factor YP_003754263.1 KEGG: mdo:100019691 similar to FRAP-related protein YP_003754265.1 KEGG: dmo:Dmoj_GI23121 GI23121 gene product from transcript GI23121-RA YP_003754266.1 KEGG: olu:OSTLU_24147 predicted protein YP_003754268.1 KEGG: cre:CHLREDRAFT_167801 hypothetical protein YP_003754269.1 KEGG: mth:MTH1028 hypothetical protein YP_003754270.1 PFAM: HNH endonuclease; KEGG: sye:Syncc9902_1436 HNH nuclease YP_003754271.1 KEGG: tva:TVAG_348550 Sec23/Sec24 zinc finger family protein YP_003754272.1 KEGG: lhk:LHK_01497 exonuclease; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase family YP_003754273.1 PFAM: ERF family protein; KEGG: rpi:Rpic_2344 ERF family protein YP_003754275.1 KEGG: sma:SAV_2858 M protein YP_003754278.1 KEGG: lga:LGAS_1167 trigger factor YP_003754279.1 KEGG: bpt:Bpet2666 chloride channel protein-related protein YP_003754280.1 KEGG: ere:EUBREC_0387 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003754281.1 KEGG: mdo:100018023 similar to ATPase, class I, type 8B, member 3 YP_003754282.1 KEGG: pmu:PM0674 hypothetical protein YP_003754283.1 KEGG: saa:SAUSA300_1957 phiPVL ORF046-like protein YP_003754284.1 KEGG: sro:Sros_7095 hypothetical protein YP_003754285.1 KEGG: mlo:mlr7272 hypothetical protein YP_003754286.1 KEGG: dfe:Dfer_3702 protein of unknown function DUF1549 YP_003754288.1 KEGG: tmz:Tmz1t_0342 ATPase AAA YP_003754289.1 KEGG: dol:Dole_0697 NusG antitermination factor YP_003754291.1 KEGG: bph:Bphy_1887 lambda family phage portal protein YP_003754292.1 KEGG: pat:Patl_2643 KDPG and KHG aldolase YP_003754294.1 KEGG: rru:Rru_A0712 XRE family transcriptional regulator YP_003754295.1 KEGG: nha:Nham_2362 hypothetical protein; PFAM: Pathogenesis-related transcriptional factor and ERF protein; HNH endonuclease; SMART: HNH nuclease YP_003754296.1 KEGG: ade:Adeh_3620 hypothetical protein YP_003754297.1 KEGG: slt:Slit_1566 plectin YP_003754298.1 KEGG: api:100159509 similar to excision repair cross-complementing rodent repair deficiency, complementation group 4 YP_003754299.1 KEGG: mma:MM_2295 surface layer protein B YP_003754301.1 KEGG: ppa:PAS_chr2-2_0118 hypothetical protein YP_003754302.1 manually curated; KEGG: hap:HAPS_1583 phage small subunit terminase YP_003754303.1 PFAM: protein of unknown function DUF264; KEGG: mlo:mll0463 bacteriophage terminase large subunit-like protein YP_003754304.1 KEGG: ctt:CtCNB1_2648 hypothetical protein YP_003754305.1 KEGG: art:Arth_2332 hypothetical protein YP_003754307.1 KEGG: mrd:Mrad2831_5694 hypothetical protein YP_003754308.1 KEGG: rlt:Rleg2_1147 hypothetical protein YP_003754309.1 KEGG: yen:YE0694 adhesin YP_003754310.1 KEGG: osa:4336532 hypothetical protein YP_003754311.1 KEGG: mrb:Mrub_0518 type IV secretory pathway VirB4 protein YP_003754312.1 KEGG: rpi:Rpic_2295 hypothetical protein YP_003754313.1 KEGG: ypb:YPTS_3441 outer membrane autotransporter YP_003754314.1 KEGG: pan:PODANSg4525 hypothetical protein YP_003754315.1 KEGG: rcu:RCOM_1968810 DNA transfer protein gp7 YP_003754316.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bgl:bglu_1g21240 P42.1 YP_003754317.1 KEGG: azc:AZC_0850 hypothetical protein YP_003754318.1 KEGG: mes:Meso_0239 hypothetical protein YP_003754319.1 KEGG: mea:Mex_1p1304 hypothetical protein YP_003754320.1 KEGG: ang:An10g00420 hypothetical protein YP_003754321.1 KEGG: syw:SYNW2350 hypothetical protein YP_003754322.1 KEGG: abc:ACICU_02150 hypothetical protein YP_003754323.1 KEGG: gym:GYMC10_3997 hypothetical protein YP_003754324.1 KEGG: nha:Nham_2362 hypothetical protein; PFAM: Pathogenesis-related transcriptional factor and ERF protein; HNH endonuclease; SMART: HNH nuclease YP_003754325.1 KEGG: nfa:nfa8110 hypothetical protein YP_003754326.1 KEGG: bmj:BMULJ_02960 type IV pilus assembly protein YP_003754327.1 KEGG: xau:Xaut_0830 citrate transporter YP_003754328.1 PFAM: glycosyl transferase family 25; KEGG: swd:Swoo_0075 glycosyl transferase YP_003754329.1 PFAM: polysaccharide biosynthesis protein; KEGG: dda:Dd703_0209 polysaccharide biosynthesis protein YP_003754330.1 PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN1499 glycosyltransferase YP_003754331.1 KEGG: eba:ebA5880 hypothetical protein YP_003754332.1 PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; KEGG: pap:PSPA7_1980 polysaccharide biosynthesis protein; O-antigen biosynthesis protein YP_003754333.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: pen:PSEEN1501 nucleoside-diphosphate-sugar epimerase WbjC YP_003754334.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tmz:Tmz1t_3803 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003754335.1 PFAM: glycosyl transferase group 1; KEGG: pph:Ppha_0573 glycosyl transferase group 1 YP_003754336.1 PFAM: sugar transferase; KEGG: tmz:Tmz1t_1126 undecaprenyl-phosphate galactose phosphotransferase YP_003754337.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: avn:Avin_30060 trimeric LpxA-like family protein YP_003754338.1 KEGG: pph:Ppha_0579 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003754339.1 PFAM: glycosyl transferase family 2; KEGG: mch:Mchl_0392 glycosyl transferase family 2 YP_003754340.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bph:Bphy_5960 NADH:flavin oxidoreductase/NADH oxidase YP_003754341.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: mlo:mll3593 hypothetical protein YP_003754342.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bph:Bphy_5959 hypothetical protein YP_003754343.1 KEGG: bph:Bphy_5956 electron transfer flavoprotein alpha subunit; PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; SMART: electron transfer flavoprotein alpha/beta-subunit YP_003754344.1 KEGG: prw:PsycPRwf_0546 hypothetical protein YP_003754345.1 PFAM: protein of unknown function DUF204; KEGG: bbt:BBta_7389 hypothetical protein YP_003754346.1 KEGG: nve:NEMVE_v1g246414 hypothetical protein YP_003754347.1 KEGG: rlt:Rleg2_3869 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003754348.1 KEGG: avi:Avi_4287 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003754349.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pla:Plav_1481 GCN5-related N-acetyltransferase YP_003754350.1 KEGG: bid:Bind_0415 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_003754351.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rpe:RPE_4095 sodium/calcium exchanger membrane region YP_003754352.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: azc:AZC_4139 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_003754353.1 KEGG: atc:AGR_C_5042 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003754354.1 PFAM: cytidylyltransferase; manually curated; KEGG: smd:Smed_3012 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003754355.1 KEGG: pla:Plav_1476 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003754356.1 PFAM: protein of unknown function DUF163; KEGG: mlo:mll4004 rRNA large subunit methyltransferase YP_003754357.1 KEGG: fjo:Fjoh_4322 G:T/U mismatch-specific DNA glycosylase-like protein YP_003754358.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: alv:Alvin_0717 short-chain dehydrogenase/reductase SDR YP_003754359.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: msl:Msil_0590 protein of unknown function DUF306 MetA and HslJ YP_003754360.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_1613 acyl-CoA dehydrogenase domain-containing protein YP_003754361.1 PFAM: ribonuclease BN; KEGG: azc:AZC_4650 ribonuclease BN YP_003754362.1 KEGG: rsq:Rsph17025_3009 crotonyl-CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_003754363.1 KEGG: bur:Bcep18194_C7709 hypothetical protein YP_003754364.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: xau:Xaut_1197 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003754365.1 KEGG: rop:ROP_59940 GTP-binding protein TypA YP_003754366.1 PFAM: O-antigen polymerase; KEGG: azl:AZL_d00270 hypothetical protein YP_003754367.1 PFAM: glycoside hydrolase; KEGG: mag:amb1842 beta-glucosidase-related glycosidase YP_003754368.1 PFAM: regulatory protein LysR; KEGG: bja:bll3775 formate dehydrogenase YP_003754369.1 KEGG: msl:Msil_0927 hypothetical protein YP_003754370.1 KEGG: mrd:Mrad2831_2947 hypothetical protein YP_003754371.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: atc:AGR_C_5068 hypothetical protein YP_003754372.1 KEGG: rpt:Rpal_1625 hypothetical protein YP_003754373.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_2970 TonB-dependent receptor YP_003754374.1 KEGG: mrd:Mrad2831_4479 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003754375.1 KEGG: msl:Msil_3037 methyltransferase; TIGRFAM: methyltransferase; PFAM: protein of unknown function DUF2260 YP_003754376.1 PFAM: protein of unknown function DUF323; KEGG: msl:Msil_3038 protein of unknown function DUF323 YP_003754377.1 PFAM: protein of unknown function DUF427; KEGG: bbt:BBta_5398 hypothetical protein YP_003754378.1 KEGG: pla:Plav_1262 alpha/beta hydrolase fold; manually curated; PFAM: alpha/beta hydrolase fold YP_003754379.1 PFAM: protein of unknown function DUF2189, transmembrane; KEGG: rhi:NGR_c15150 hypothetical protein YP_003754380.1 PFAM: MraZ domain; KEGG: bid:Bind_0683 hypothetical protein YP_003754381.1 KEGG: azc:AZC_4546 methyltransferase; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003754382.1 KEGG: mch:Mchl_5103 hypothetical protein YP_003754383.1 KEGG: nha:Nham_1273 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003754384.1 KEGG: mrd:Mrad2831_2362 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YP_003754385.1 KEGG: met:M446_0259 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003754386.1 KEGG: azc:AZC_4541 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003754387.1 KEGG: mch:Mchl_5098 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003754388.1 PFAM: cell cycle protein; KEGG: xau:Xaut_1190 cell division protein FtsW YP_003754389.1 KEGG: azc:AZC_4555 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003754390.1 KEGG: mno:Mnod_7442 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003754391.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: azc:AZC_4560 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase YP_003754392.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: mno:Mnod_7439 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003754393.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: mlo:mll1550 cell division protein FtsQ YP_003754394.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: xau:Xaut_0327 cell division protein FtsA; SMART: cell division protein FtsA YP_003754395.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: rlt:Rleg2_2586 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain YP_003754396.1 KEGG: met:M446_6696 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_003754397.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: mlo:mll1543 hypothetical protein YP_003754398.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein; NAD-dependent DNA ligase OB-fold; KEGG: xau:Xaut_1762 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein YP_003754399.1 PFAM: peptidase M24; creatinase; KEGG: pla:Plav_2434 peptidase M24 YP_003754400.1 PFAM: ribosomal L11 methyltransferase; KEGG: pde:Pden_0622 ribosomal L11 methyltransferase YP_003754401.1 KEGG: psl:Psta_4598 hypothetical protein YP_003754402.1 KEGG: ava:Ava_2736 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003754404.1 PFAM: UvrD/REP helicase; KEGG: azc:AZC_4475 DNA helicase II YP_003754405.1 PFAM: AsmA family protein; KEGG: mlo:mll1482 hypothetical protein YP_003754406.1 KEGG: nha:Nham_2735 arylsulfate sulfotransferase-related protein YP_003754407.1 KEGG: sjp:SJA_C1-31150 hypothetical protein YP_003754408.1 KEGG: pla:Plav_2445 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003754409.1 KEGG: afw:Anae109_0406 DEAD/DEAH box helicase domain-containing protein YP_003754410.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rec:RHECIAT_CH0002049 hypothetical protein YP_003754411.1 PFAM: methyltransferase type 12; KEGG: swi:Swit_2164 methyltransferase type 12 YP_003754412.1 PFAM: protein of unknown function DUF1321; KEGG: xau:Xaut_1418 hypothetical protein YP_003754413.1 PFAM: hypothetical protein; KEGG: amr:AM1_2826 CAAX amino terminal protease family protein YP_003754414.1 TIGRFAM: thymidylate synthase; KEGG: pla:Plav_2448 thymidylate synthase; PFAM: thymidylate synthase YP_003754415.1 manually curated; KEGG: mes:Meso_1247 hypothetical protein YP_003754416.1 KEGG: oan:Oant_1793 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003754417.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bja:bll6509 membrane bound protease protein; SMART: band 7 protein YP_003754418.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: azc:AZC_2570 HflC protein precursor; SMART: band 7 protein YP_003754419.1 PFAM: protein of unknown function DUF2065; KEGG: pla:Plav_2460 hypothetical protein YP_003754420.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: azc:AZC_2572 serine protease DO-like protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003754421.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: rpe:RPE_2008 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003754422.1 KEGG: rpe:RPE_2009 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003754423.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: tbd:Tbd_1239 mannose-1-phosphate guanylyltransferase (GDP); PFAM: nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_003754424.1 PFAM: protein of unknown function DUF87; KEGG: pla:Plav_1359 hypothetical protein YP_003754425.1 KEGG: pla:Plav_1358 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003754426.1 TIGRFAM: TonB family protein; KEGG: nhl:Nhal_1797 TonB family protein YP_003754427.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: rru:Rru_A2154 biopolymer transporter ExbD/TolR YP_003754428.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mno:Mnod_1395 MotA/TolQ/ExbB proton channel YP_003754429.1 KEGG: mex:Mext_1619 hypothetical protein YP_003754430.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase YP_003754431.1 KEGG: dre:796666 hypothetical protein LOC796666 YP_003754432.1 KEGG: pla:Plav_2807 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003754434.1 KEGG: rpa:RPA3811 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; SMART: excinuclease ABC C subunit domain protein YP_003754435.1 PFAM: amidase; KEGG: mes:Meso_0343 amidase YP_003754436.1 PFAM: aminotransferase class V; KEGG: bpt:Bpet4350 serine-glyoxylate aminotransferase-related YP_003754437.1 KEGG: mes:Meso_1752 hypothetical protein YP_003754438.1 KEGG: xau:Xaut_1526 hypothetical protein YP_003754439.1 PFAM: protein of unknown function DUF1007; KEGG: rpe:RPE_4805 hypothetical protein YP_003754440.1 PFAM: periplasmic solute binding protein; KEGG: rec:RHECIAT_CH0002848 zinc uptake ABC transporter substrate-binding protein YP_003754441.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0202 two component transcriptional regulator; SMART: response regulator receiver; transcriptional regulator domain protein YP_003754442.1 KEGG: mno:Mnod_7424 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein YP_003754443.1 TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; KEGG: bid:Bind_3411 phosphate ABC transporter ATPase subunit; SMART: ATPase AAA YP_003754444.1 KEGG: mlo:mll3720 phosphate transporter permease protein PstA; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component YP_003754445.1 KEGG: msl:Msil_0838 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component YP_003754446.1 KEGG: azl:AZL_e02450 phosphate transporter substrate-binding protein; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003754447.1 KEGG: met:M446_1659 histidine kinase; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003754448.1 KEGG: bcm:Bcenmc03_1872 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074 YP_003754449.1 PFAM: peptidase M75, Imelysin; KEGG: azc:AZC_2744 uncharacterized iron-regulated protein YP_003754450.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: azl:AZL_c02540 multicopper oxidase type 3 YP_003754451.1 PFAM: protein of unknown function DUF1111; KEGG: azc:AZC_2746 thiol oxidoreductase YP_003754452.1 PFAM: peptidase M75, Imelysin; KEGG: bpt:Bpet3463 hypothetical protein YP_003754453.1 PFAM: conserved hypothetical protein; KEGG: bpe:BP1558 hypothetical protein YP_003754454.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM protein; KEGG: rce:RC1_0705 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003754455.1 KEGG: mno:Mnod_2658 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003754456.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: alv:Alvin_0692 membrane-bound metal-dependent hydrolase YP_003754457.1 PFAM: regulatory protein TetR; KEGG: vex:VEA_004024 transcriptional regulator YP_003754458.1 KEGG: pla:Plav_0225 TadE family protein YP_003754459.1 PFAM: TadE family protein; KEGG: bja:blr3942 hypothetical protein YP_003754460.1 KEGG: bja:blr1444 hypothetical protein YP_003754461.1 PFAM: Flp/Fap pilin component; KEGG: nwi:Nwi_0304 Flp/Fap pilin component YP_003754462.1 PFAM: Flp/Fap pilin component; KEGG: las:CLIBASIA_03100 hypothetical protein YP_003754463.1 PFAM: peptidase A24A prepilin type IV; KEGG: oca:OCAR_7418 peptidase A24A, prepilin type IV YP_003754464.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rpd:RPD_3519 Flp pilus assembly CpaB; SMART: SAF domain protein YP_003754465.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: pla:Plav_0233 type II and III secretion system protein YP_003754466.1 KEGG: pla:Plav_0234 pilus biogenesis lipoprotein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: pilus biogenesis CpaD-related YP_003754467.1 KEGG: pla:Plav_0235 response regulator receiver protein YP_003754468.1 PFAM: type II secretion system protein E; KEGG: mno:Mnod_2830 type II secretion system protein E YP_003754469.1 PFAM: type II secretion system F domain; KEGG: pla:Plav_0237 type II secretion system protein YP_003754470.1 PFAM: type II secretion system F domain; KEGG: pla:Plav_0238 type II secretion system protein YP_003754471.1 PFAM: hypothetical protein; KEGG: rpe:RPE_3757 hypothetical protein YP_003754472.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_2976 leucyl aminopeptidase YP_003754473.1 PFAM: NLP/P60 protein; KEGG: mno:Mnod_1116 NLP/P60 protein YP_003754474.1 KEGG: mag:amb1098 hypothetical protein YP_003754475.1 PFAM: alpha/beta hydrolase fold; KEGG: gau:GAU_3415 hypothetical protein YP_003754476.1 PFAM: glutathione S-transferase domain; KEGG: azo:azo3542 glutathione transferase YP_003754477.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; KEGG: sus:acid_4009 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada; SMART: Helix-turn-helix, AraC domain YP_003754478.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: azc:AZC_2084 YeeE/YedE family protein YP_003754479.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: azc:AZC_2083 YeeE/YedE family protein YP_003754480.1 KEGG: dsh:Dshi_4226 hypothetical protein YP_003754481.1 KEGG: YVTN beta-propeller repeat family protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; SMART: WD-40 repeat protein YP_003754482.1 KEGG: mrd:Mrad2831_2411 cytochrome C550 YP_003754483.1 PFAM: extracellular solute-binding protein family 3; KEGG: azl:AZL_a05230 extracellular solute-binding protein YP_003754484.1 KEGG: tmz:Tmz1t_2818 hypothetical protein YP_003754485.1 SMART: beta-lactamase; KEGG: swi:Swit_0686 beta-lactamase domain-containing protein YP_003754486.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: mch:Mchl_1540 PQQ-dependent dehydrogenase, methanol/ethanol family; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003754487.1 PFAM: protein of unknown function DUF1194; KEGG: mrd:Mrad2831_3936 hypothetical protein YP_003754488.1 KEGG: xop:PXO_00366 general stress protein YP_003754489.1 KEGG: xcv:XCV1419 hypothetical protein YP_003754490.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: mrd:Mrad2831_3539 uracil-DNA glycosylase superfamily protein YP_003754491.1 SMART: Elongator protein 3/MiaB/NifB; KEGG: mch:Mchl_2580 radical SAM domain-containing protein YP_003754492.1 PFAM: protein of unknown function DUF347; KEGG: npu:Npun_R6200 hypothetical protein YP_003754493.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein YP_003754494.1 KEGG: tcr:504839.70 hypothetical protein YP_003754495.1 KEGG: rle:RL1157 two-component response regulator transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003754496.1 KEGG: rlt:Rleg2_0703 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003754497.1 KEGG: sus:acid_5802 hypothetical protein YP_003754498.1 KEGG: ccs:CCNA_01546 DEAD-box RNA helicase-like protein; PFAM: DEAD/DEAH box helicase; helicase; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003754499.1 KEGG: rsq:Rsph17025_4362 hypothetical protein YP_003754500.1 KEGG: rsq:Rsph17025_4361 N-6 DNA methylase YP_003754501.1 KEGG: mag:amb3266 hypothetical protein YP_003754502.1 KEGG: rle:pRL90162 cobalamin synthesis protein YP_003754503.1 SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; DNA-binding protein; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; TIGRFAM: DNA polymerase I; KEGG: pla:Plav_0105 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain YP_003754504.1 KEGG: oca:OCAR_4132 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_003754505.1 KEGG: afw:Anae109_0029 major facilitator transporter YP_003754506.1 KEGG: bja:bsl1446 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003754507.1 KEGG: rru:Rru_A1521 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003754508.1 PFAM: peptidase M15A; KEGG: apa:APP7_0124 hypothetical protein YP_003754509.1 KEGG: abo:ABO_1669 hypothetical protein YP_003754510.1 KEGG: ctp:CTRG_04016 similar to potential protein kinase YP_003754511.1 KEGG: mpo:Mpop_1814 hypothetical protein YP_003754512.1 KEGG: dmo:Dmoj_GI13885 GI13885 gene product from transcript GI13885-RA YP_003754513.1 KEGG: pap:PSPA7_5558 Sel1 YP_003754514.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; KEGG: pla:Plav_0223 GTP-binding protein LepA; SMART: elongation factor G domain protein YP_003754515.1 KEGG: syx:SynWH7803_1731 signal recognition particle protein YP_003754516.1 PFAM: protein of unknown function DUF125 transmembrane; rubrerythrin; KEGG: azl:AZL_013670 hypothetical protein YP_003754517.1 KEGG: bbt:BBta_2243 hypothetical protein; TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein YP_003754518.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: met:M446_4539 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003754519.1 TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: pla:Plav_0221 phenylalanyl-tRNA synthetase subunit beta YP_003754520.1 KEGG: oca:OCAR_4439 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003754521.1 KEGG: mno:Mnod_5553 ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003754522.1 KEGG: dsh:Dshi_0230 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003754523.1 KEGG: gwc:GWCH70_2402 ABC transporter YP_003754524.1 PFAM: GtrA family protein; KEGG: sal:Sala_2862 GtrA-like protein YP_003754525.1 KEGG: clu:CLUG_04191 hypothetical protein YP_003754526.1 KEGG: ami:Amir_3335 cellulase YP_003754527.1 KEGG: amr:AM1_2994 cyclic nucleotide-binding protein, PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003754528.1 KEGG: xau:Xaut_1937 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_003754529.1 PFAM: protein of unknown function DUF1022; KEGG: tmz:Tmz1t_3771 protein of unknown function DUF1022 YP_003754530.1 KEGG: rpt:Rpal_3214 hypothetical protein YP_003754531.1 PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_3159 glycosyl transferase group 1 YP_003754532.1 KEGG: nha:Nham_0078 hypothetical protein YP_003754533.1 KEGG: twh:TWT151 hypothetical protein YP_003754534.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: alv:Alvin_1682 NAD-dependent epimerase/dehydratase YP_003754535.1 PFAM: hypothetical protein; KEGG: pla:Plav_0200 hypothetical protein YP_003754536.1 PFAM: glutathione S-transferase domain; KEGG: mrd:Mrad2831_3133 glutathione S-transferase domain-containing protein YP_003754537.1 KEGG: oan:Oant_1339 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_003754538.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: xau:Xaut_2034 PTS IIA-like nitrogen-regulatory protein PtsN YP_003754539.1 KEGG: pla:Plav_0191 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003754540.1 KEGG: oca:OCAR_4459 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region YP_003754541.1 KEGG: bbt:BBta_0122 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003754542.1 PFAM: OstA family protein; protein of unknown function DUF1239; KEGG: pla:Plav_0194 cell envelope biogenesis YhbN YP_003754543.1 KEGG: pla:Plav_0196 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease YP_003754544.1 KEGG: cli:Clim_1656 hypothetical protein YP_003754545.1 KEGG: msl:Msil_0262 hypothetical protein YP_003754546.1 PFAM: DoxX family protein; KEGG: mpo:Mpop_0499 DoxX family protein YP_003754547.1 KEGG: atc:AGR_C_3412 thermolabile glutaminase (glutaminase A); PFAM: glutaminase, core YP_003754548.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: mei:Msip34_1977 outer membrane autotransporter barrel domain protein; SMART: Autotransporter beta- domain protein YP_003754549.1 KEGG: pop:POPTR_562495 hypothetical protein YP_003754550.1 KEGG: gem:GM21_3035 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_003754551.1 TIGRFAM: solute symporter protein; KEGG: eba:ebA828 hypothetical protein YP_003754552.1 PFAM: Na+/solute symporter; KEGG: tro:trd_1113 sodium/solute symporter YP_003754553.1 KEGG: pla:Plav_0503 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003754554.1 KEGG: oan:Oant_0406 hypothetical protein YP_003754555.1 KEGG: pla:Plav_0458 peptidoglycan binding domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_003754556.1 PFAM: protein of unknown function DUF81; KEGG: mes:Meso_0026 hypothetical protein YP_003754557.1 PFAM: conserved hypothetical protein; KEGG: pla:Plav_0456 hypothetical protein YP_003754558.1 PFAM: metallophosphoesterase; KEGG: rpt:Rpal_0876 metallophosphoesterase YP_003754559.1 KEGG: bmr:BMI_II819 ATP-dependent RNA helicase, DEAD/DEAH box family; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein YP_003754560.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: mes:Meso_0094 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_003754561.1 PFAM: protein of unknown function DUF952; KEGG: rpd:RPD_0787 hypothetical protein YP_003754562.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: mea:Mex_p20010 hypothetical protein YP_003754563.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: bmr:BMI_II784 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic YP_003754564.1 manually curated; KEGG: smd:Smed_4300 hypothetical protein YP_003754565.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: rpe:RPE_0091 penicillin-insensitive murein endopeptidase YP_003754566.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: mno:Mnod_1140 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003754567.1 KEGG: mes:Meso_3980 hypothetical protein YP_003754568.1 KEGG: gau:GAU_2472 hypothetical protein YP_003754569.1 KEGG: nar:Saro_0764 hypothetical protein YP_003754570.1 KEGG: nar:Saro_0765 hypothetical protein YP_003754571.1 KEGG: nar:Saro_0770 hypothetical protein YP_003754572.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: msl:Msil_3423 succinylglutamate desuccinylase/aspartoacylase YP_003754573.1 KEGG: mpo:Mpop_0997 hypothetical protein YP_003754574.1 PFAM: transposase mutator type; KEGG: mdi:METDI2659 transposase of IS1354, IS256 family YP_003754576.1 KEGG: dgr:Dgri_GH14159 GH14159 gene product from transcript GH14159-RA YP_003754577.1 KEGG: mea:Mex_1p2655 cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA); TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003754578.1 KEGG: mno:Mnod_2139 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein YP_003754579.1 KEGG: dac:Daci_5149 ankyrin; PFAM: ankyrin; SMART: ankyrin YP_003754580.1 PFAM: NGN domain protein; KEGG: aeh:Mlg_0093 transcription antitermination protein NusG YP_003754581.1 PFAM: glycosyl transferase group 1; KEGG: mca:MCA1168 colanic acid biosynthesis glycosyl transferase YP_003754582.1 PFAM: protein of unknown function DUF218; KEGG: rpe:RPE_3419 hypothetical protein YP_003754583.1 KEGG: rsp:RSP_7375 colanic acid biosynthesis acetyltransferase WcaF YP_003754584.1 PFAM: glycosyl transferase group 1; KEGG: rba:RB2471 poly(glycerol-phosphate) alpha-glucosyltransferase YP_003754585.1 PFAM: glycosyl transferase group 1; KEGG: cyc:PCC7424_5790 glycosyl transferase group 1 YP_003754586.1 KEGG: sus:acid_4652 transmembrane prediction YP_003754587.1 PFAM: glycosyl transferase group 1; KEGG: bmi:BMEA_B0399 glycosyl transferase group 1 YP_003754588.1 PFAM: glycosyl transferase group 1; KEGG: pmc:P9515_14181 hypothetical protein YP_003754589.1 PFAM: glycosyl transferase group 1; KEGG: pmc:P9515_13801 hypothetical protein YP_003754590.1 PFAM: glycosyl transferase group 1; KEGG: pmc:P9515_13811 hypothetical protein YP_003754591.1 TIGRFAM: methyltransferase FkbM family; KEGG: tmz:Tmz1t_2883 methyltransferase FkbM family YP_003754592.1 TIGRFAM: methyltransferase FkbM family; KEGG: sli:Slin_5205 methyltransferase FkbM family YP_003754593.1 PFAM: glycosyl transferase group 1; KEGG: ote:Oter_2759 glycosyl transferase group 1 YP_003754594.1 PFAM: polysaccharide biosynthesis protein; KEGG: pjd:Pjdr2_1229 polysaccharide biosynthesis protein YP_003754595.1 KEGG: nhl:Nhal_1316 hypothetical protein YP_003754596.1 KEGG: eba:ebA6795 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003754597.1 TIGRFAM: capsular exopolysaccharide family; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein YP_003754598.1 KEGG: eba:ebA6802 capsular polysaccharide biosynthesis protein; PFAM: PHP domain protein YP_003754599.1 KEGG: eba:ebA6791 hypothetical protein YP_003754600.1 PFAM: O-antigen polymerase; KEGG: eba:ebA5975 binding-protein-dependent transporter protein YP_003754601.1 PFAM: sugar transferase; KEGG: rso:RS02342 glycosyl transferase transmembrane protein YP_003754602.1 PFAM: protein of unknown function DUF983; KEGG: bid:Bind_1611 hypothetical protein YP_003754603.1 KEGG: rsk:RSKD131_3171 hypothetical protein; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003754604.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: scl:sce4293 alcohol dehydrogenase YP_003754605.1 KEGG: atc:AGR_C_4642 molybdate-binding periplasmic protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003754606.1 KEGG: msl:Msil_0059 molybdate ABC transporter inner membrane subunit; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003754607.1 KEGG: mno:Mnod_3727 molybdate ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003754608.1 PFAM: regulatory protein LysR; KEGG: bbt:BBta_1642 LysR family transcriptional regulator YP_003754609.1 PFAM: ABC transporter; KEGG: rpt:Rpal_4025 ABC-2 type transporter YP_003754610.1 KEGG: nwi:Nwi_2361 ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003754611.1 KEGG: rsp:RSP_0920 biopolymer transporter, ExbB YP_003754612.1 PFAM: regulatory protein TetR; KEGG: rpt:Rpal_3430 TetR family transcriptional regulator YP_003754613.1 PFAM: NHL repeat containing protein; KEGG: mno:Mnod_3274 glucose/sorbosone dehydrogenase YP_003754614.1 KEGG: reu:Reut_B4897 NAD-dependent epimerase/dehydratase; TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003754615.1 KEGG: bur:Bcep18194_B0107 glycosyl transferase family protein; TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2 YP_003754616.1 KEGG: oca:OCAR_6674 squalene synthase HpnC; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase YP_003754617.1 TIGRFAM: squalene synthase HpnD; KEGG: mno:Mnod_7144 squalene synthase HpnD; PFAM: Squalene/phytoene synthase YP_003754618.1 KEGG: met:M446_6348 squalene-associated FAD-dependent desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase YP_003754619.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; KEGG: mno:Mnod_7146 squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase YP_003754620.1 KEGG: bid:Bind_3157 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003754621.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein; KEGG: msl:Msil_3245 hopanoid biosynthesis associated radical SAM protein HpnH; SMART: Elongator protein 3/MiaB/NifB YP_003754622.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: zmn:Za10_0417 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003754623.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: msl:Msil_3246 hopanoid biosynthesis associated RND transporter like protein HpnN YP_003754624.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM protein; KEGG: met:M446_6339 hopanoid biosynthesis associated radical SAM protein HpnJ; SMART: Elongator protein 3/MiaB/NifB YP_003754625.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; KEGG: hopanoid biosynthesis associated glycosyl transferase protein HpnI YP_003754626.1 PFAM: VacJ family lipoprotein; KEGG: hne:HNE_2105 lipoprotein VacJ YP_003754627.1 KEGG: rru:Rru_A0056 toluene tolerance; TIGRFAM: hopanoid biosynthesis associated membrane protein HpnM; PFAM: toluene tolerance family protein YP_003754628.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; transketolase; KEGG: bra:BRADO2161 1-deoxy-D-xylulose-5-phosphate synthase; SMART: transketolase central region YP_003754629.1 KEGG: mag:amb3101 hypothetical protein YP_003754630.1 KEGG: reh:H16_B2171 cell wall biosynthesis glycosyltransferase; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2 YP_003754631.1 KEGG: mag:amb3100 hypothetical protein; TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein YP_003754632.1 KEGG: bja:bsr4462 hypothetical protein YP_003754633.1 KEGG: cre:CHLREDRAFT_190948 hypothetical protein YP_003754634.1 KEGG: rru:Rru_A1617 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1289 YP_003754635.1 KEGG: bch:Bcen2424_5288 hypothetical protein YP_003754636.1 KEGG: rpc:RPC_2504 hypothetical protein YP_003754637.1 KEGG: rpc:RPC_2505 phosphoglycerate mutase; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase YP_003754638.1 PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: bja:bll2448 cellulose synthase catalytic subunit YP_003754639.1 KEGG: bja:bll2449 hypothetical protein YP_003754640.1 KEGG: pol:Bpro_5177 hypothetical protein YP_003754641.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_2415 major facilitator transporter YP_003754642.1 manually curated; PFAM: ABC transporter; ABC transporter transmembrane region; KEGG: nwi:Nwi_1064 ABC transporter transmembrane region; SMART: ATPase AAA YP_003754643.1 KEGG: slt:Slit_2909 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase YP_003754644.1 KEGG: mno:Mnod_4335 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003754645.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: rru:Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003754646.1 PFAM: protein of unknown function UPF0118; KEGG: xau:Xaut_1431 hypothetical protein YP_003754647.1 KEGG: bra:BRADO1053 hypothetical protein YP_003754648.1 KEGG: hne:HNE_2267 hypothetical protein YP_003754649.1 KEGG: pti:PHATR_46635 hypothetical protein YP_003754650.1 PFAM: cupin; KEGG: nha:Nham_1257 hypothetical protein YP_003754651.1 KEGG: bja:bll4718 hypothetical protein YP_003754652.1 PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mrd:Mrad2831_6157 oxidoreductase FAD/NAD(P)-binding subunit YP_003754653.1 KEGG: oca:OCAR_7340 hypothetical protein YP_003754654.1 PFAM: glutamine amidotransferase class-II; KEGG: atc:AGR_L_1268 hypothetical protein YP_003754655.1 PFAM: glutamate synthase subunit alpha domain protein; KEGG: ret:RHE_PE00420 formyl-methanofuran dehydrogenase domain-containing protein YP_003754656.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: rlg:Rleg_6577 ferredoxin-dependent glutamate synthase YP_003754657.1 KEGG: mlo:mll7307 glutamine synthetase III; TIGRFAM: glutamine synthetaseII; PFAM: glutamine synthetase YP_003754658.1 PFAM: glutamine amidotransferase class-I; KEGG: rpc:RPC_0879 glutamine amidotransferase class-I YP_003754659.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bja:bll6183 hypothetical protein YP_003754660.1 PFAM: glycoside hydrolase; KEGG: bid:Bind_0865 glycoside hydrolase family 3 protein YP_003754661.1 PFAM: protein of unknown function DUF2470; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mes:Meso_2207 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003754662.1 KEGG: rpc:RPC_4886 HhH-GPD; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003754663.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: ara:Arad_1327 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B YP_003754664.1 KEGG: yli:YALI0B22110g YALI0B22110p YP_003754665.1 KEGG: rfr:Rfer_1604 hypothetical protein YP_003754666.1 KEGG: mms:mma_3236 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003754667.1 PFAM: catalase related subgroup; KEGG: bur:Bcep18194_C7513 catalase-like YP_003754668.1 PFAM: general substrate transporter; KEGG: har:HEAR3004 MFS family transporter YP_003754669.1 PFAM: Soluble ligand binding domain; KEGG: nhl:Nhal_2430 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003754670.1 KEGG: dmo:Dmoj_GI13511 GI13511 gene product from transcript GI13511-RA YP_003754671.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4699 LysR family transcriptional regulator YP_003754672.1 PFAM: protein of unknown function DUF2302; KEGG: cli:Clim_2385 OmpA/MotB domain protein YP_003754673.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sme:SMa0228 glutamate dehydrogenase YP_003754674.1 KEGG: azc:AZC_1368 ABC transporter periplasmic substrate-binding protein YP_003754675.1 KEGG: azc:AZC_1369 transcriptional regulatory protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator YP_003754677.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bph:Bphy_5960 NADH:flavin oxidoreductase/NADH oxidase YP_003754678.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bph:Bphy_5959 hypothetical protein YP_003754679.1 KEGG: bph:Bphy_5956 electron transfer flavoprotein alpha subunit; PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; SMART: electron transfer flavoprotein alpha/beta-subunit YP_003754680.1 KEGG: azc:AZC_1370 amino acid transporter permease protein YP_003754681.1 PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: msl:Msil_3605 glycine cleavage T protein (aminomethyl transferase) YP_003754682.1 KEGG: rhi:NGR_c23520 hemin receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003754683.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bph:Bphy_6540 antibiotic biosynthesis monooxygenase YP_003754684.1 TIGRFAM: TonB family protein; KEGG: sme:SMc01515 hypothetical protein YP_003754686.1 KEGG: app:CAP2UW1_2797 hypothetical protein YP_003754687.1 KEGG: ssl:SS1G_12938 hypothetical protein YP_003754688.1 PFAM: NnrS family protein; KEGG: oca:OCAR_5023 NnrS family protein YP_003754689.1 KEGG: oca:OCAR_5528 hypothetical protein YP_003754690.1 KEGG: sro:Sros_9004 dihydroorotate oxidase; manually curated; PFAM: dihydroorotate oxidase YP_003754691.1 KEGG: hha:Hhal_0570 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003754692.1 KEGG: psa:PST_2067 hypothetical protein YP_003754693.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: tmz:Tmz1t_2836 coenzyme PQQ biosynthesis protein E; SMART: Elongator protein 3/MiaB/NifB YP_003754694.1 PFAM: coenzyme PQQ synthesis D; KEGG: psa:PST_2069 pyrroloquinoline quinone biosynthesis protein D YP_003754695.1 KEGG: psa:PST_2070 hypothetical protein; TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_003754696.1 PFAM: beta-ketoacyl synthase; KEGG: nha:Nham_1503 3-oxoacyl-(acyl carrier protein) synthase II YP_003754697.1 PFAM: beta-ketoacyl synthase; KEGG: rpc:RPC_2109 3-oxoacyl-(acyl carrier protein) synthase II YP_003754698.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_CH0002576 probable alcohol dehydrogenase protein YP_003754699.1 PFAM: beta-ketoacyl synthase; KEGG: rpe:RPE_2020 3-oxoacyl-(acyl carrier protein) synthase II YP_003754700.1 PFAM: beta-ketoacyl synthase; KEGG: rpb:RPB_3355 3-oxoacyl-(acyl carrier protein) synthase II YP_003754701.1 PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: nwi:Nwi_1245 3-hydroxymyristoyl-acyl carrier protein dehydratase YP_003754702.1 PFAM: phosphopantetheine-binding; KEGG: xau:Xaut_1263 acyl carrier protein YP_003754703.1 KEGG: hoh:Hoch_5030 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: MaoC domain protein dehydratase; short-chain dehydrogenase/reductase SDR YP_003754704.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: sus:acid_7156 FkbH like protein YP_003754705.1 KEGG: gme:Gmet_2339 acyl carrier protein YP_003754706.1 manually curated; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: mes:Meso_4292 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_003754707.1 KEGG: mes:Meso_4293 3-octaprenyl-4hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein YP_003754708.1 KEGG: mes:Meso_4295 lipid carrier protein-like YP_003754709.1 PFAM: peptidase U32; KEGG: mes:Meso_4296 peptidase U32 YP_003754710.1 PFAM: peptidase U32; KEGG: mes:Meso_4297 peptidase U32 YP_003754711.1 PFAM: cytochrome P450; KEGG: bmr:BMI_II385 heme-thiolate monooxygenase YP_003754712.1 KEGG: azl:AZL_023730 transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003754713.1 PFAM: protein of unknown function DUF2478; KEGG: rsp:RSP_6153 hypothetical protein YP_003754714.1 KEGG: oca:OCAR_5039 hypothetical protein YP_003754715.1 KEGG: mes:Meso_4288 hypothetical protein YP_003754716.1 KEGG: mes:Meso_4286 hypothetical protein YP_003754717.1 PFAM: Ferrous iron transporter; KEGG: mes:Meso_4285 membrane antigen YP_003754718.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM protein; KEGG: rhi:NGR_c09890 HemN coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_003754720.1 KEGG: atc:AGR_L_947 hypothetical protein YP_003754721.1 KEGG: mag:amb2940 hypothetical protein YP_003754722.1 PFAM: cytochrome C oxidase subunit III; KEGG: mag:amb2941 heme/copper-type cytochrome/quinol oxidase subunit 3 YP_003754723.1 KEGG: oan:Oant_4386 cytochrome C class I YP_003754724.1 KEGG: azl:AZL_c02070 nitric-oxide reductase, cytochrome b-containing subunit I; PFAM: cytochrome C oxidase subunit I YP_003754725.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: azl:AZL_c02060 nitric-oxide reductase NorQ protein YP_003754726.1 KEGG: azl:AZL_c02050 nitric-oxide reductase NorD protein; PFAM: von Willebrand factor A; SMART: von Willebrand factor A YP_003754727.1 KEGG: nha:Nham_1934 hypothetical protein YP_003754728.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azl:AZL_a08620 iron complex outermembrane recepter protein YP_003754729.1 KEGG: rba:RB13053 signal peptide YP_003754730.1 KEGG: atc:AGR_C_1196 hypothetical protein YP_003754731.1 KEGG: plu:plu3942 cystathionine beta-lyase YP_003754732.1 PFAM: NnrS family protein; KEGG: mes:Meso_4289 NnrS YP_003754733.1 TIGRFAM: nitrite reductase, copper-containing; KEGG: oca:OCAR_7249 copper-containing nitrite reductase; PFAM: multicopper oxidase type 3 YP_003754734.1 PFAM: Host attachment protein; KEGG: rlt:Rleg2_0970 hypothetical protein YP_003754735.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rpd:RPD_3277 ATP-binding region, ATPase-like; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_003754736.1 KEGG: acr:Acry_0577 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003754737.1 KEGG: met:M446_0946 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003754738.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; KEGG: mei:Msip34_2466 PAS/PAC sensor protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_003754739.1 KEGG: mei:Msip34_2465 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_003754740.1 KEGG: mei:Msip34_2464 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003754741.1 KEGG: cko:CKO_02656 coproporphyrinogen III oxidase; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003754742.1 PFAM: protein of unknown function DUF1008; KEGG: hha:Hhal_0383 hypothetical protein YP_003754743.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hha:Hhal_0382 NAD-dependent epimerase/dehydratase family protein YP_003754744.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: cak:Caul_1141 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_003754745.1 KEGG: smd:Smed_0236 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003754746.1 KEGG: nwi:Nwi_2070 hypothetical protein YP_003754747.1 KEGG: nwi:Nwi_2070 hypothetical protein YP_003754748.1 TIGRFAM: cyanate lyase; KEGG: msl:Msil_0112 cyanate hydratase; PFAM: Cyanate lyase domain protein YP_003754749.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: vei:Veis_4915 formate dehydrogenase YP_003754750.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: msl:Msil_2452 LysR family transcriptional regulator YP_003754751.1 manually curated; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; globin; KEGG: mrd:Mrad2831_4540 fis family transcriptional regulator; SMART: ATPase AAA YP_003754752.1 KEGG: tgr:Tgr7_1816 cupin 2, conserved barrel YP_003754753.1 KEGG: met:M446_1940 hypothetical protein YP_003754755.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; manually curated; KEGG: bmr:BMI_I102 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase YP_003754756.1 KEGG: oca:OCAR_5762 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; sporulation domain protein YP_003754757.1 KEGG: mgr:MGG_03391 hypothetical protein YP_003754758.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: pla:Plav_2797 ATP-dependent Clp protease adaptor protein ClpS YP_003754759.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: azc:AZC_1595 ATPase AAA; SMART: AAA ATPase YP_003754760.1 KEGG: dsh:Dshi_0026 NAD-dependent epimerase/dehydratase YP_003754761.1 PFAM: histidine triad (HIT) protein; KEGG: rlg:Rleg_1771 histidine triad (HIT) protein YP_003754762.1 PFAM: protein of unknown function DUF482; KEGG: pla:Plav_2802 hypothetical protein YP_003754763.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: xau:Xaut_3792 glycerophosphoryl diester phosphodiesterase YP_003754764.1 PFAM: endoribonuclease L-PSP; KEGG: bmr:BMI_I1176 endoribonuclease L-PSP YP_003754765.1 PFAM: Domain of unknown function DUF1849; KEGG: bid:Bind_1791 hypothetical protein YP_003754766.1 KEGG: azc:AZC_1853 hypothetical protein YP_003754767.1 KEGG: mmr:Mmar10_1276 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003754768.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rpb:RPB_2413 response regulator PleD; SMART: GGDEF domain containing protein; response regulator receiver YP_003754769.1 KEGG: sjp:SJA_C1-01020 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003754770.1 PFAM: NUDIX hydrolase; KEGG: cak:Caul_1500 NUDIX hydrolase YP_003754771.1 PFAM: protein of unknown function DUF983; KEGG: msl:Msil_3844 protein of unknown function DUF983 YP_003754772.1 PFAM: ribonuclease II; RNA binding S1 domain protein; manually curated; KEGG: mno:Mnod_7411 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease YP_003754773.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003754774.1 KEGG: rcu:RCOM_1781100 Nodulation protein W YP_003754775.1 KEGG: nha:Nham_2285 DNA processing protein DprA, TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003754776.1 PFAM: protein of unknown function DUF205; KEGG: ara:Arad_1894 glycerol-3-phosphate acyltransferase PlsY YP_003754777.1 KEGG: mno:Mnod_3311 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase; PFAM: amidohydrolase YP_003754778.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: pla:Plav_2836 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003754779.1 KEGG: rsq:Rsph17025_1879 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003754780.1 KEGG: oca:OCAR_5794 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003754781.1 KEGG: mno:Mnod_0669 hypothetical protein YP_003754782.1 KEGG: rpt:Rpal_3517 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: amidase YP_003754783.1 KEGG: oca:OCAR_5798 T-protein; PFAM: chorismate mutase, type II; SMART: chorismate mutase YP_003754784.1 KEGG: mno:Mnod_3319 hypothetical protein YP_003754785.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; KEGG: mpo:Mpop_3262 glutamyl-tRNA(Gln) amidotransferase, B subunit; SMART: Asn/Gln amidotransferase YP_003754787.1 PFAM: cytochrome P450; KEGG: mno:Mnod_6754 cytochrome P450 YP_003754789.1 KEGG: pmr:PMI3534 hypothetical protein YP_003754790.1 KEGG: mxa:MXAN_6419 hypothetical protein YP_003754791.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mms:mma_0551 NADPH2:quinone reductase YP_003754792.1 PFAM: glutathione S-transferase domain; KEGG: xau:Xaut_3798 glutathione S-transferase domain-containing protein YP_003754793.1 KEGG: cai:Caci_7322 hypothetical protein YP_003754794.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: pla:Plav_2849 Sel1 domain-containing protein YP_003754795.1 KEGG: sma:SAV_5152 hypothetical protein YP_003754797.1 KEGG: cag:Cagg_2731 secretion protein HlyD family protein YP_003754798.1 KEGG: ago:AGOS_AEL256C AEL256Cp YP_003754799.1 KEGG: rpb:RPB_3312 hypothetical protein YP_003754800.1 KEGG: pwa:Pecwa_0674 hypothetical protein YP_003754801.1 KEGG: ava:Ava_0764 hypothetical protein YP_003754802.1 KEGG: nph:NP3638A transducer protein htr8 YP_003754803.1 KEGG: smd:Smed_1346 hypothetical protein YP_003754804.1 KEGG: bfs:BF1720 hypothetical protein YP_003754805.1 KEGG: ank:AnaeK_0467 exonuclease SbcC YP_003754806.1 KEGG: xca:xccb100_1050 hypothetical protein YP_003754807.1 KEGG: dma:DMR_14610 hypothetical protein YP_003754808.1 KEGG: dma:DMR_14620 hypothetical protein YP_003754809.1 KEGG: met:M446_3983 integrase family protein; manually curated; PFAM: integrase family protein YP_003754810.1 PFAM: protein of unknown function DUF344; KEGG: xau:Xaut_4684 hypothetical protein YP_003754811.1 KEGG: mpo:Mpop_2607 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_003754812.1 KEGG: bra:BRADO4915 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_003754813.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA0765 outer membrane receptor for iron transport YP_003754814.1 KEGG: pde:Pden_4169 sulfonate/nitrate transport system substrate-binding protein YP_003754815.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pde:Pden_4168 binding-protein-dependent transport systems inner membrane component YP_003754816.1 KEGG: pde:Pden_4167 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003754817.1 PFAM: NnrS family protein; KEGG: pde:Pden_4166 NnrS family protein YP_003754818.1 PFAM: NnrS family protein; KEGG: msl:Msil_1524 NnrS family protein YP_003754820.1 PFAM: DSBA oxidoreductase; KEGG: dsh:Dshi_4063 DsbA oxidoreductase YP_003754821.1 PFAM: protein of unknown function DUF442; KEGG: abo:ABO_1944 hypothetical protein YP_003754822.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mag:amb0857 transporter component YP_003754823.1 KEGG: rpd:RPD_4201 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003754824.1 KEGG: tgr:Tgr7_2207 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003754825.1 KEGG: tgr:Tgr7_2205 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding YP_003754826.1 KEGG: tkm:TK90_0644 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003754827.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: tgr:Tgr7_2206 biotin/lipoate A/B protein ligase YP_003754828.1 KEGG: tgr:Tgr7_0821 GMP synthase - glutamine amidotransferase domain-like protein YP_003754829.1 KEGG: afr:AFE_0363 hypothetical protein YP_003754830.1 KEGG: tkm:TK90_0632 iron-sulfur cluster-binding protein YP_003754831.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: afr:AFE_2586 heterodisulfide reductase subunit B, homolog YP_003754832.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: tgr:Tgr7_2214 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003754833.1 KEGG: afr:AFE_2552 hypothetical protein YP_003754834.1 KEGG: tgr:Tgr7_2212 heterodisulfide reductase subunit C YP_003754835.1 KEGG: tgr:Tgr7_2211 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein YP_003754836.1 KEGG: hypothetical protein YP_003754837.1 PFAM: glycine cleavage system protein H; KEGG: tgr:Tgr7_2208 glycine cleavage system protein H YP_003754838.1 PFAM: cytochrome P450; KEGG: met:M446_1094 cytochrome P450 YP_003754839.1 PFAM: SirA family protein; KEGG: mag:amb0858 redox protein YP_003754840.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_1528 protein of unknown function DUF395 YeeE/YedE YP_003754841.1 KEGG: xau:Xaut_1527 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003754842.1 KEGG: mdi:METDI0763 regulatory protein SoxS precursor YP_003754843.1 KEGG: rpt:Rpal_4962 hypothetical protein YP_003754844.1 KEGG: xau:Xaut_1522 hypothetical protein YP_003754845.1 KEGG: rpd:RPD_4255 sulfur oxidation protein SoxY YP_003754846.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: rpt:Rpal_4959 sulphur oxidation protein SoxZ YP_003754847.1 PFAM: 5'-nucleotidase domain protein; KEGG: bja:blr3515 Mn-dependent hydrolase YP_003754848.1 PFAM: transposase mutator type; KEGG: mdi:METDI2659 transposase of IS1354, IS256 family YP_003754849.1 manually curated; KEGG: nha:Nham_3887 transposase and inactivated derivatives-like YP_003754850.1 PFAM: transposase IS4 family protein; KEGG: mdi:METDI2654 transposase of IS1357, IS701 family YP_003754851.1 KEGG: mdi:METDI2655 transcriptional repressor of DCM dehalogenase; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR YP_003754852.1 PFAM: glutathione S-transferase domain; KEGG: mdi:METDI2656 dichloromethane dehalogenase (DCM dehalogenase) YP_003754853.1 KEGG: mdi:METDI2657 hypothetical protein YP_003754854.1 KEGG: mdi:METDI2658 hypothetical protein YP_003754855.1 PFAM: transposase mutator type; KEGG: mdi:METDI2659 transposase of IS1354, IS256 family YP_003754856.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003754857.1 PFAM: regulatory protein TetR; KEGG: mmb:Mmol_0057 TetR family transcriptional regulator YP_003754858.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pca:Pcar_2639 LysR family transcriptional regulator YP_003754859.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B3588 hypothetical protein YP_003754860.1 PFAM: protein of unknown function DUF442; KEGG: reu:Reut_B3588 hypothetical protein YP_003754861.1 PFAM: protein of unknown function DUF81; KEGG: azc:AZC_2081 hypothetical protein YP_003754862.1 SMART: beta-lactamase; KEGG: bja:bll2990 hypothetical protein YP_003754863.1 KEGG: bja:blr6185 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003754864.1 KEGG: bid:Bind_0534 hypothetical protein YP_003754865.1 KEGG: alv:Alvin_0640 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003754866.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; histidine kinase A domain protein; GAF domain protein; KEGG: mag:amb0896 C4-dicarboxylate transport sensor protein DctS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_003754867.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: psa:PST_0144 isovaleryl-CoA dehydrogenase YP_003754868.1 KEGG: mba:Mbar_A3281 hypothetical protein YP_003754869.1 KEGG: aba:acid345_2739 aspartyl/asparaginyl beta-hydroxylase YP_003754870.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bam:Bamb_0105 (acyl-carrier-protein) phosphodiesterase YP_003754871.1 KEGG: gbe:GbCGDNIH1_0908 peroxidase; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; peroxiredoxin-like YP_003754872.1 PFAM: fatty acid desaturase; KEGG: lbf:LBF_2715 flavodoxin reductase YP_003754873.1 PFAM: globin; KEGG: tkm:TK90_2328 globin YP_003754874.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; oxidoreductase FAD-binding domain protein; KEGG: pmy:Pmen_2542 oxidoreductase FAD/NAD(P)-binding subunit YP_003754875.1 PFAM: ferric-uptake regulator; KEGG: mch:Mchl_0456 ferric uptake regulator, Fur family YP_003754876.1 PFAM: protein of unknown function DUF1488; KEGG: bja:bsl0168 hypothetical protein YP_003754877.1 PFAM: alpha/beta hydrolase fold; KEGG: msl:Msil_2478 hypothetical protein YP_003754879.1 KEGG: mms:mma_2479 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_003754880.1 SMART: beta-lactamase; KEGG: azc:AZC_2082 beta-lactamase-like protein YP_003754881.1 KEGG: mca:MCA0318 SCO1/SenC family protein/methylamine utilization protein MauG, PFAM: Di-haem cytochrome C peroxidase YP_003754882.1 PFAM: electron transporter SCO1/SenC; KEGG: mca:MCA0318 SCO1/SenC family protein/methylamine utilization protein MauG YP_003754883.1 KEGG: mca:MCA0317 selenium-binding protein YP_003754884.1 KEGG: ppu:PP_2422 alkylhydroperoxidase-like protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003754885.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mes:Meso_2063 TonB-dependent receptor YP_003754886.1 KEGG: azl:AZL_007810 hypothetical protein YP_003754887.1 TIGRFAM: TonB family protein; KEGG: rlg:Rleg_3266 TonB family protein YP_003754888.1 KEGG: rlt:Rleg2_2272 hypothetical protein YP_003754889.1 PFAM: protein of unknown function DUF105; KEGG: oan:Oant_4452 hypothetical protein YP_003754890.1 KEGG: cak:Caul_0473 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003754891.1 KEGG: asa:ASA_2896 hypothetical protein YP_003754892.1 KEGG: sjp:SJA_C1-11420 hypothetical protein YP_003754893.1 KEGG: sal:Sala_2779 hypothetical protein YP_003754894.1 TIGRFAM: DNA polymerase III subunit alpha; KEGG: xau:Xaut_3468 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein YP_003754895.1 KEGG: azo:azo1336 sulfate transporter substrate-binding protein; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003754896.1 KEGG: msl:Msil_2419 serine O-acetyltransferase YP_003754897.1 KEGG: bid:Bind_1233 hypothetical protein YP_003754898.1 KEGG: bxe:Bxe_B1552 cysteine desulphurases, SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003754899.1 KEGG: isc:IscW_ISCW004815 histidyl-tRNA synthetase YP_003754900.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003754901.1 KEGG: eba:ebA2148 chemotaxis response regulator; PFAM: CheB methylesterase YP_003754902.1 KEGG: bid:Bind_3835 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: HWE histidine kinase; MCP methyltransferase CheR-type; hypothetical protein; CheB methylesterase; SMART: MCP methyltransferase CheR-type; PAC repeat-containing protein; PAS domain containing protein YP_003754903.1 SMART: cyclic nucleotide-binding; KEGG: met:M446_1834 cyclic nucleotide-binding protein YP_003754904.1 KEGG: swi:Swit_5289 hypothetical protein YP_003754905.1 KEGG: pfl:PFL_2576 hypothetical protein YP_003754906.1 KEGG: rsk:RSKD131_1931 hypothetical protein YP_003754907.1 KEGG: spe:Spro_1278 cell envelope integrity inner membrane protein TolA YP_003754908.1 KEGG: swi:Swit_5230 hypothetical protein YP_003754909.1 KEGG: rle:RL3714 phytochrome/sensor histidine kinase; PFAM: HWE histidine kinase; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; response regulator receiver; SMART: response regulator receiver; GAF domain protein YP_003754910.1 PFAM: nuclear transport factor 2; KEGG: mrd:Mrad2831_5935 signal peptide protein YP_003754911.1 PFAM: regulatory protein TetR; KEGG: mch:Mchl_1454 TetR family transcriptional regulator YP_003754912.1 PFAM: endoribonuclease L-PSP; KEGG: rer:RER_29590 hypothetical protein YP_003754913.1 PFAM: FAD dependent oxidoreductase; KEGG: sil:SPOA0380 hypothetical protein YP_003754914.1 TIGRFAM: glutamine synthetaseII; KEGG: mlo:mlr6210 glutamine synthetase III; PFAM: glutamine synthetase YP_003754915.1 PFAM: glutamine amidotransferase class-II; KEGG: mch:Mchl_1938 glutamine amidotransferase class-II YP_003754916.1 PFAM: glutamate synthase subunit alpha domain protein; KEGG: mch:Mchl_1939 glutamate synthase subunit alpha domain protein YP_003754917.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mei:Msip34_2421 ferredoxin-dependent glutamate synthase YP_003754918.1 KEGG: tgr:Tgr7_1702 transcriptional regulator, XRE family; PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; SMART: hypothetical protein YP_003754919.1 PFAM: amino acid permease-associated region; KEGG: smd:Smed_3317 amino acid permease-associated region YP_003754920.1 PFAM: extracellular solute-binding protein family 3; KEGG: msl:Msil_3735 extracellular solute-binding protein family 3 YP_003754921.1 KEGG: msl:Msil_3734 hypothetical protein YP_003754922.1 KEGG: azo:azo3865 quinoprotein ethanol dehydrogenase; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003754923.1 KEGG: bid:Bind_0121 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003754924.1 KEGG: bid:Bind_0120 transketolase; PFAM: transketolase; transketolase; SMART: transketolase YP_003754925.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: gdj:Gdia_3501 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_003754926.1 KEGG: xau:Xaut_4046 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003754927.1 PFAM: thiazole biosynthesis protein; KEGG: gdj:Gdia_0011 thiazole synthase YP_003754928.1 KEGG: rde:RD1_0748 thiamine biosynthesis protein ThiS, TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003754929.1 KEGG: cbr:CBG21404 Hypothetical protein CBG21404 YP_003754930.1 manually curated; TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: mpo:Mpop_2913 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003754931.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003754932.1 KEGG: dol:Dole_1776 histidine kinase YP_003754933.1 KEGG: oca:OCAR_7033 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003754934.1 PFAM: cytochrome C class I; KEGG: mpt:Mpe_A1589 hypothetical protein YP_003754935.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A1591 quinoprotein ethanol dehydrogenase precursor; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003754936.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sal:Sala_0085 oxidoreductase YP_003754937.1 KEGG: rlg:Rleg_2200 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003754938.1 KEGG: rlt:Rleg2_1990 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003754939.1 PFAM: regulatory protein TetR; KEGG: ara:Arad_3404 transcriptional regulator protein YP_003754940.1 PFAM: patatin; KEGG: mlo:mlr3635 hypothetical protein YP_003754941.1 KEGG: msl:Msil_0811 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003754942.1 KEGG: mno:Mnod_4592 acetoacetate decarboxylase; PFAM: acetoacetate decarboxylase YP_003754943.1 manually curated; KEGG: met:M446_1940 hypothetical protein YP_003754944.1 KEGG: aav:Aave_2157 TetR family transcriptional regulator; manually curated; PFAM: regulatory protein TetR YP_003754945.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2158 major facilitator superfamily transporter YP_003754946.1 KEGG: oca:OCAR_6755 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_003754947.1 KEGG: nwi:Nwi_2888 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_003754948.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: pde:Pden_1347 methylcitrate synthase; PFAM: citrate synthase YP_003754949.1 SMART: beta-lactamase; KEGG: bja:bll4367 hypothetical protein YP_003754950.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B2817 DNA-binding transcriptional regulator CynR YP_003754951.1 KEGG: mfa:Mfla_0310 signal peptide protein YP_003754952.1 KEGG: mpo:Mpop_3828 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003754953.1 KEGG: mpo:Mpop_3827 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003754954.1 KEGG: mch:Mchl_0100 hypothetical protein YP_003754955.1 PFAM: choloylglycine hydrolase; KEGG: gdj:Gdia_2282 choloylglycine hydrolase YP_003754956.1 KEGG: azl:AZL_009970 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003754957.1 PFAM: phosphate transporter; KEGG: gme:Gmet_3131 phosphate transporter YP_003754958.1 KEGG: mpt:Mpe_A3016 hypothetical protein YP_003754960.1 PFAM: Ppx/GppA phosphatase; KEGG: bcs:BCAN_B0683 Ppx/GppA phosphatase YP_003754961.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pla:Plav_1167 ribosomal RNA methyltransferase RrmJ/FtsJ YP_003754962.1 KEGG: cai:Caci_3101 peptidase M1 membrane alanine aminopeptidase YP_003754963.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: azc:AZC_4333 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_003754964.1 PFAM: protein of unknown function DUF1123; KEGG: rpd:RPD_2267 hypothetical protein YP_003754965.1 PFAM: Fmu (Sun) domain protein; KEGG: mlo:mlr6944 SUN-family protein YP_003754966.1 KEGG: mbn:Mboo_2041 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003754967.1 KEGG: hau:Haur_1893 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003754968.1 PFAM: TspO/MBR family protein; KEGG: bpy:Bphyt_6800 TspO and MBR like protein YP_003754969.1 KEGG: azc:AZC_3705 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_003754970.1 KEGG: gau:GAU_1342 hypothetical protein YP_003754971.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rce:RC1_3973 acetyltransferase, GNAT family YP_003754972.1 PFAM: Uncharacterised protein family UPF0324; KEGG: xau:Xaut_2660 hypothetical protein YP_003754973.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oca:OCAR_7550 transcriptional regulator of LysR family YP_003754974.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: oca:OCAR_5974 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_003754975.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: mno:Mnod_6042 acetyl-CoA carboxylase, biotin carboxylase; SMART: biotin carboxylase domain protein YP_003754976.1 KEGG: bbt:BBta_4215 biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003754977.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: rce:RC1_0930 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003754978.1 PFAM: DSBA oxidoreductase; KEGG: bra:BRADO3507 outer membrane protein YP_003754979.1 PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: bja:bll4295 hypothetical protein YP_003754980.1 KEGG: azc:AZC_3627 ribonuclease E and G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/ribonuclease E/G YP_003754981.1 KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003754982.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: azc:AZC_3625 penicillin-binding protein 1A precursor; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003754983.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003754984.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: apt:APA01_21570 malonate semialdehyde decarboxylase YP_003754985.1 KEGG: gyc:GYMC61_3110 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit YP_003754986.1 KEGG: avi:Avi_0413 SAM dependent methyltransferase YP_003754987.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tRNA/rRNA methyltransferase SpoU YP_003754988.1 PFAM: ribosomal L11 methyltransferase; KEGG: hoh:Hoch_0805 histone-arginine N-methyltransferase YP_003754989.1 PFAM: NnrUfamily protein; KEGG: alv:Alvin_3109 NnrUfamily protein YP_003754990.1 KEGG: psb:Psyr_3507 hypothetical protein YP_003754991.1 KEGG: azo:azo0747 hypothetical protein YP_003754992.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_3881 ErfK/YbiS/YcfS/YnhG family protein YP_003754993.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: bbt:BBta_3771 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003754994.1 PFAM: protein of unknown function DUF2133; KEGG: rpe:RPE_3347 hypothetical protein YP_003754995.1 PFAM: pyrrolo-quinoline quinone; KEGG: pla:Plav_3493 pyrrolo-quinoline quinone YP_003754996.1 KEGG: rpt:Rpal_3505 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003754997.1 KEGG: mpo:Mpop_3271 conserved hypothetical protein; exported protein YP_003754998.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: mch:Mchl_5119 DNA polymerase III chi subunit HolC YP_003754999.1 PFAM: protein of unknown function DUF519; KEGG: bja:blr7467 hypothetical protein YP_003755000.1 KEGG: bid:Bind_0662 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003755001.1 KEGG: rcu:RCOM_1781100 Nodulation protein W YP_003755002.1 KEGG: oan:Oant_1647 hypothetical protein YP_003755003.1 KEGG: tps:THAPS_10992 hypothetical protein YP_003755004.1 KEGG: dan:Dana_GF13208 GF13208 gene product from transcript GF13208-RA YP_003755005.1 KEGG: mno:Mnod_1693 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003755006.1 PFAM: protein of unknown function DUF2328; KEGG: mno:Mnod_1690 hypothetical protein YP_003755007.1 PFAM: inositol monophosphatase; KEGG: oan:Oant_0202 3'(2'),5'-bisphosphate nucleotidase YP_003755008.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_0516 hypothetical protein YP_003755009.1 KEGG: rpd:RPD_3683 hypothetical protein YP_003755010.1 KEGG: oca:OCAR_4913 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003755011.1 KEGG: bme:BMEI1294 nitrogen fixation regulation protein FixK; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003755012.1 PFAM: hemic uptake protein hemP; KEGG: mmb:Mmol_2109 hemin transporter, hemin uptake protein YP_003755013.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bja:bll7423 hypothetical protein YP_003755014.1 PFAM: protein of unknown function DUF1008; KEGG: atc:AGR_C_4470 hypothetical protein X YP_003755015.1 PFAM: periplasmic binding protein; KEGG: msl:Msil_1931 periplasmic binding protein YP_003755016.1 PFAM: transporter permease; KEGG: mrd:Mrad2831_4589 transporter permease YP_003755017.1 KEGG: mrd:Mrad2831_4590 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003755018.1 KEGG: sti:Sthe_0732 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003755019.1 PFAM: Rare lipoprotein A; KEGG: ccs:CCNA_01901 lipoprotein YP_003755020.1 KEGG: avi:Avi_0082 hypothetical protein YP_003755021.1 KEGG: pol:Bpro_5069 hypothetical protein YP_003755022.1 KEGG: rso:RS03125 hypothetical protein YP_003755023.1 KEGG: saq:Sare_0311 chaperonin GroEL YP_003755024.1 KEGG: reh:H16_B0392 extra-cytoplasmic solute receptor YP_003755025.1 KEGG: msl:Msil_1305 hypothetical protein YP_003755026.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: emi:Emin_0863 DegT/DnrJ/EryC1/StrS aminotransferase YP_003755027.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:acid_6945 GCN5-related N-acetyltransferase YP_003755028.1 KEGG: rlg:Rleg_0769 cytochrome C YP_003755029.1 KEGG: cmi:CMM_0820 secreted protein YP_003755030.1 KEGG: mrd:Mrad2831_5487 hypothetical protein YP_003755031.1 KEGG: ncr:NCU02184 hypothetical protein YP_003755032.1 KEGG: mno:Mnod_7191 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: transketolase YP_003755033.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: met:M446_6300 dehydrogenase catalytic domain-containing protein YP_003755034.1 KEGG: bmj:BMULJ_02119 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003755035.1 KEGG: chl:Chy400_0215 autotransporter-associated beta strand repeat protein YP_003755036.1 KEGG: tgu:100218673 zinc finger CCCH-type containing 13 YP_003755037.1 PFAM: patatin; KEGG: msl:Msil_0353 patatin YP_003755038.1 KEGG: xau:Xaut_4187 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003755039.1 PFAM: YCII-related; KEGG: msl:Msil_1747 YCII-related YP_003755040.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rec:RHECIAT_CH0002764 hypothetical protein YP_003755041.1 KEGG: nha:Nham_2144 hypothetical protein YP_003755042.1 KEGG: hypothetical protein YP_003755043.1 manually curated; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: rpe:RPE_3682 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003755044.1 PFAM: integrase family protein; KEGG: met:M446_2924 integrase family protein YP_003755045.1 KEGG: hla:Hlac_3437 helicase; PFAM: helicase; SNF2-related protein; SMART: DEAD-like helicase ; helicase YP_003755046.1 SMART: HNH nuclease; KEGG: dps:DP2015 hypothetical protein YP_003755047.1 KEGG: hla:Hlac_3438 hypothetical protein YP_003755048.1 KEGG: plt:Plut_0854 invertase/recombinase like protein; PFAM: Resolvase domain; SMART: Resolvase domain YP_003755049.1 KEGG: cak:Caul_1386 hypothetical protein YP_003755050.1 KEGG: sil:SPO2655 replicative DNA helicase YP_003755051.1 KEGG: bja:bll2759 response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003755052.1 KEGG: azl:AZL_c01170 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; MASE1 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003755053.1 KEGG: gvi:gll0876 AcrB/AcrD/AcrF family multidrug efflux protein; manually curated; PFAM: acriflavin resistance protein YP_003755054.1 KEGG: bcj:BCAS0583 efflux system transport protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003755055.1 KEGG: esa:ESA_02519 hypothetical protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003755056.1 KEGG: ana:alr1677 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_003755058.1 KEGG: ret:RHE_PE00140 hypothetical protein YP_003755059.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003755060.1 KEGG: azc:AZC_1424 nitrite extrusion protein; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_003755061.1 KEGG: azc:AZC_1425 nitrate reductase subunit alpha protein; TIGRFAM: nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003755062.1 TIGRFAM: nitrate reductase subunit beta; KEGG: azc:AZC_1426 nitrate reductase subunit beta protein YP_003755063.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: azc:AZC_1427 nitrate reductase subunit delta protein; PFAM: nitrate reductase subunit delta YP_003755064.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: azc:AZC_1428 nitrate reductase subunit gamma protein; PFAM: nitrate reductase subunit gamma YP_003755065.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: azc:AZC_1429 peptidyl-prolyl cis-trans isomerase YP_003755066.1 KEGG: mrd:Mrad2831_2587 hypothetical protein YP_003755067.1 KEGG: sjp:SJA_C1-00680 hypothetical protein YP_003755068.1 KEGG: scb:SCAB_59641 hypothetical protein YP_003755069.1 PFAM: protein of unknown function DUF2165, transmembrane; KEGG: pfl:PFL_0497 hypothetical protein YP_003755070.1 KEGG: ddi:DDB_0191207 glycoprotein gp100 YP_003755071.1 PFAM: acriflavin resistance protein; KEGG: nwi:Nwi_1521 acriflavin resistance protein YP_003755072.1 PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein YP_003755073.1 KEGG: ara:Arad_4549 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003755074.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bra:BRADO2968 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003755075.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: dac:Daci_3070 methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B YP_003755076.1 KEGG: pzu:PHZ_c1072 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_003755077.1 PFAM: molybdopterin binding domain; KEGG: azc:AZC_1819 competence-damage associated protein YP_003755078.1 KEGG: ara:Arad_8639 sugar ABC transporter YP_003755079.1 KEGG: rci:RRC32 hypothetical protein YP_003755080.1 PFAM: phosphate transporter; KEGG: bra:BRADO6359 inorganic phosphate transporter YP_003755082.1 KEGG: rso:RSc2279 signal peptide protein YP_003755083.1 PFAM: excinuclease ABC C subunit domain protein; KEGG: cpc:Cpar_1954 excinuclease ABC C subunit domain protein YP_003755084.1 manually curated; KEGG: hba:Hbal_2279 hypothetical protein YP_003755085.1 KEGG: mno:Mnod_6038 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit YP_003755086.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: pla:Plav_3297 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_003755087.1 PFAM: protein of unknown function DUF2155; KEGG: mno:Mnod_6040 hypothetical protein YP_003755088.1 KEGG: pla:Plav_2897 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_003755089.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: bid:Bind_0884 peptidoglycan binding domain-containing protein YP_003755090.1 KEGG: sme:SMc01768 transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003755091.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: met:M446_6833 enoyl-CoA hydratase/isomerase YP_003755092.1 PFAM: Extensin family protein; KEGG: xau:Xaut_2474 extensin family protein YP_003755094.1 TIGRFAM: 5-aminolevulinic acid synthase; KEGG: msl:Msil_2030 5-aminolevulinate synthase; PFAM: aminotransferase class I and II YP_003755095.1 KEGG: mch:Mchl_3495 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003755096.1 PFAM: ATP-cone domain protein; KEGG: mlo:mlr8403 transcriptional regulator NrdR YP_003755097.1 KEGG: xau:Xaut_4278 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_003755098.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: azl:AZL_010170 riboflavin synthase alpha chain; PFAM: Lumazine-binding protein YP_003755099.1 KEGG: pla:Plav_2912 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003755100.1 KEGG: rce:RC1_1337 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003755101.1 KEGG: bja:bll5028 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003755102.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: mea:Mex_1p3373 thiamin-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003755103.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: msl:Msil_2112 ErfK/YbiS/YcfS/YnhG family protein YP_003755104.1 KEGG: bja:bll3178 transcriptional regulatory protein; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003755105.1 TIGRFAM: alanine dehydrogenase; KEGG: sme:SMc01169 alanine dehydrogenase oxidoreductase protein; PFAM: alanine dehydrogenase/PNT domain protein YP_003755106.1 KEGG: sme:SMc01534 omega amino acid--pyruvate transaminase; PFAM: aminotransferase class-III YP_003755107.1 KEGG: azl:AZL_c00280 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_003755108.1 KEGG: cak:Caul_3954 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003755109.1 PFAM: aldehyde dehydrogenase; KEGG: cak:Caul_3955 aldehyde dehydrogenase YP_003755110.1 PFAM: glutamine synthetase; KEGG: cak:Caul_3952 glutamine synthetase YP_003755111.1 KEGG: hna:Hneap_2381 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26 YP_003755112.1 PFAM: aminotransferase class-III; KEGG: mlo:mll1207 aminotransferase YP_003755113.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bac:BamMC406_0585 TetR family transcriptional regulator YP_003755114.1 PFAM: glucose sorbosone dehydrogenase; KEGG: dba:Dbac_1142 glucose sorbosone dehydrogenase YP_003755115.1 KEGG: nmc:NMC0998 hypothetical protein YP_003755116.1 KEGG: msl:Msil_3909 hypothetical protein YP_003755117.1 KEGG: bbt:BBta_7804 heat shock protein-DnaJ-like protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003755118.1 KEGG: dre:405822 phosphoglucomutase 2 YP_003755119.1 KEGG: rpc:RPC_3683 hypothetical protein YP_003755120.1 KEGG: bxe:Bxe_B0776 membrane glycoprotein YP_003755121.1 KEGG: aga:AgaP_AGAP011790 CLIP-domain serine protease subfamily A (AGAP011790-PB) YP_003755123.1 KEGG: bja:bll0419 hypothetical protein YP_003755124.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: bmj:BMULJ_05584 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase YP_003755125.1 KEGG: pla:Plav_0784 hypothetical protein YP_003755126.1 KEGG: sit:TM1040_0672 hypothetical protein YP_003755127.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_1025 TonB-dependent receptor YP_003755128.1 KEGG: nha:Nham_1024 BNR repeat-containing glycosyl hydrolase YP_003755129.1 KEGG: nha:Nham_1023 signal peptide protein YP_003755130.1 PFAM: transglycosylase; KEGG: oan:Oant_1065 transglycosylase YP_003755131.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mno:Mnod_8517 2-nitropropane dioxygenase NPD YP_003755132.1 KEGG: hha:Hhal_2401 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074 YP_003755133.1 KEGG: pzu:PHZ_c2662 truncated hemoglobin-like protein YP_003755134.1 KEGG: sro:Sros_3921 multidrug efflux protein NorA YP_003755135.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: xau:Xaut_1777 sulphur oxidation protein SoxZ YP_003755136.1 PFAM: protein of unknown function DUF583; KEGG: rru:Rru_A1867 hypothetical protein YP_003755137.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: mno:Mnod_1830 periplasmic glucan biosynthesis protein MdoG YP_003755138.1 PFAM: protein of unknown function DUF74; KEGG: cak:Caul_3365 hypothetical protein YP_003755139.1 KEGG: pla:Plav_2723 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003755140.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: rpd:RPD_3202 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein YP_003755141.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11-like; KEGG: pla:Plav_2725 ribosomal protein L11; SMART: ribosomal protein L11 YP_003755142.1 KEGG: rhi:NGR_c11790 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003755143.1 PFAM: ribosomal protein L10; KEGG: bbt:BBta_5083 50S ribosomal protein L10 YP_003755144.1 KEGG: gdj:Gdia_2959 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12 YP_003755145.1 KEGG: bra:BRADO3054 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase subunit beta; DNA-directed RNA polymerase subunit beta, external 1 domain YP_003755146.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 4; KEGG: pla:Plav_2730 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_003755147.1 KEGG: bid:Bind_1349 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003755148.1 KEGG: avi:Avi_1834 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003755149.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain IV; elongation factor Tu domain 2 protein; elongation factor G domain protein; KEGG: azc:AZC_2557 elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain protein YP_003755150.1 KEGG: gau:GAU_0871 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein YP_003755151.1 KEGG: rpc:RPC_3449 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003755152.1 KEGG: nha:Nham_1545 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003755153.1 PFAM: ribosomal protein L4/L1e; KEGG: pla:Plav_2737 ribosomal protein L4/L1e YP_003755154.1 PFAM: ribosomal protein L25/L23; KEGG: pla:Plav_2738 ribosomal protein L25/L23 YP_003755155.1 KEGG: mmr:Mmar10_1792 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003755156.1 KEGG: bqu:BQ08190 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003755157.1 KEGG: mpo:Mpop_2128 ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003755158.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; ribosomal protein S3 domain; KH type 2 domain protein; KEGG: pla:Plav_2742 ribosomal protein S3; SMART: KH domain protein YP_003755159.1 KEGG: rpt:Rpal_3660 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16 YP_003755160.1 KEGG: bid:Bind_1362 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003755161.1 KEGG: bbk:BARBAKC583_0707 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003755162.1 KEGG: pla:Plav_2746 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003755163.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: azc:AZC_2543 ribosomal protein L24; SMART: KOW domain protein YP_003755164.1 PFAM: ribosomal protein L5; KEGG: msl:Msil_0568 ribosomal protein L5 YP_003755165.1 PFAM: ribosomal protein S14; KEGG: rce:RC1_0724 ribosomal protein S14 YP_003755166.1 PFAM: ribosomal protein S8; KEGG: cak:Caul_1628 ribosomal protein S8 YP_003755167.1 KEGG: mpo:Mpop_2149 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain YP_003755168.1 KEGG: oan:Oant_1972 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003755169.1 KEGG: nwi:Nwi_1381 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003755170.1 KEGG: atu:Atu8065 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003755171.1 KEGG: rpt:Rpal_3648 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003755172.1 KEGG: xau:Xaut_4778 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003755173.1 KEGG: azc:AZC_2533 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase YP_003755174.1 KEGG: mpo:Mpop_2142 ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003755175.1 KEGG: azl:AZL_018770 small subunit ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003755176.1 TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: pla:Plav_2760 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003755177.1 KEGG: hne:HNE_2826 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003755178.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hne:HNE_3360 NAD-dependent epimerase/dehydratase family protein YP_003755179.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: pla:Plav_2762 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003755180.1 PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN1839 hypothetical protein YP_003755181.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: gbe:GbCGDNIH1_2160 adenylylsulfate kinase; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003755182.1 KEGG: mlo:mlr7575 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_003755183.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; KEGG: mch:Mchl_2510 adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_003755184.1 PFAM: HI0933 family protein; KEGG: rpc:RPC_3087 HI0933-like protein YP_003755186.1 manually curated; PFAM: Cold-shock protein DNA-binding; KEGG: rpc:RPC_2791 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein YP_003755187.1 PFAM: protein of unknown function DUF192; KEGG: rpt:Rpal_2802 protein of unknown function DUF192 YP_003755188.1 KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA YP_003755189.1 PFAM: cytochrome C class I; KEGG: rpb:RPB_1376 cytochrome c, class I YP_003755190.1 KEGG: bra:BRADO5328 cytochrome C-552 precursor (cytochrome C552) YP_003755191.1 KEGG: rsk:RSKD131_1070 hypothetical protein YP_003755192.1 KEGG: rsk:RSKD131_1067 hypothetical protein YP_003755193.1 PFAM: major facilitator superfamily MFS_1; KEGG: msl:Msil_0111 major facilitator superfamily MFS_1 YP_003755194.1 PFAM: ETC complex I subunit conserved region; KEGG: pla:Plav_2976 ETC complex I subunit region YP_003755195.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: reh:H16_B1845 uracil-DNA glycosylase YP_003755196.1 PFAM: protein of unknown function DUF488; KEGG: bmr:BMI_II475 hypothetical protein YP_003755197.1 KEGG: pna:Pnap_2627 ethanolamine ammonia-lyase small subunit; PFAM: ethanolamine ammonia-lyase light chain YP_003755198.1 KEGG: pst:PSPTO_0727 ethanolamine ammonia-lyase, heavy subunit; PFAM: ethanolamine ammonia lyase large subunit YP_003755199.1 KEGG: pen:PSEEN0633 transporter; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region YP_003755200.1 KEGG: mei:Msip34_0961 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003755201.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; hypothetical protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: rfr:Rfer_4387 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003755203.1 KEGG: sjp:SJA_C1-12890 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein YP_003755204.1 manually curated; TIGRFAM: DNA polymerase LigD, ligase domain protein; KEGG: azc:AZC_1006 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein YP_003755205.1 KEGG: pzu:PHZ_p0051 ATP-dependent DNA ligase; TIGRFAM: DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: DNA primase small subunit YP_003755206.1 KEGG: ngk:NGK_0409 FolC protein YP_003755207.1 KEGG: mlo:msl1799 hypothetical protein YP_003755208.1 PFAM: natural resistance-associated macrophage protein; KEGG: bbt:BBta_7276 manganese transporter YP_003755209.1 KEGG: rpe:RPE_2634 hypothetical protein YP_003755210.1 KEGG: lrl:LC705_01953 predicted ORF YP_003755211.1 KEGG: mno:Mnod_2210 ETC complex I subunit conserved region YP_003755212.1 PFAM: PRC-barrel domain protein; KEGG: bja:blr2603 hypothetical protein YP_003755213.1 PFAM: PRC-barrel domain protein; KEGG: xau:Xaut_2027 PRC-barrel domain-containing protein YP_003755214.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smd:Smed_5297 short chain dehydrogenase YP_003755216.1 KEGG: azc:AZC_0439 hypothetical protein; manually curated; PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein YP_003755217.1 KEGG: mrd:Mrad2831_2165 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003755218.1 KEGG: msl:Msil_1705 cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003755219.1 KEGG: amr:AM1_6086 TPR repeat-containing transcriptional regulator LuxR YP_003755220.1 KEGG: rhi:NGR_c12630 hypothetical protein YP_003755221.1 KEGG: mlo:mlr6511 hypothetical protein; PFAM: von Willebrand factor A; SMART: von Willebrand factor A YP_003755222.1 PFAM: nitroreductase; KEGG: rpd:RPD_3262 nitroreductase YP_003755223.1 PFAM: ATP-NAD/AcoX kinase; KEGG: pla:Plav_2701 NAD(+) kinase YP_003755224.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: mdi:METDI0519 copper binding protein, copper sensitivity YP_003755225.1 KEGG: bra:BRADO2751 hypothetical protein YP_003755226.1 KEGG: bbt:BBta_0489 hypothetical protein YP_003755227.1 KEGG: pla:Plav_0844 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein YP_003755228.1 PFAM: ROSMUCR transcriptional regulator; KEGG: azc:AZC_1086 transcriptional regulator YP_003755229.1 KEGG: hba:Hbal_1230 chromosomal replication initiator DnaA domain; PFAM: replication initiation factor DnaA; SMART: replication initiation factor DnaA YP_003755230.1 KEGG: nwi:Nwi_2226 DNA replication initiation ATPase YP_003755231.1 PFAM: Fe-S metabolism associated SufE; KEGG: bbt:BBta_3043 SufE-like protein YP_003755232.1 KEGG: bra:BRADO2707 hypothetical protein YP_003755233.1 PFAM: peptidoglycan-binding protein; KEGG: azc:AZC_1094 hypothetical protein YP_003755234.1 PFAM: protein of unknown function DUF1491; KEGG: xau:Xaut_1408 hypothetical protein YP_003755235.1 KEGG: hmg:100207741 hypothetical protein LOC100207741 YP_003755236.1 KEGG: nwi:Nwi_1148 hypothetical protein YP_003755237.1 PFAM: protein of unknown function DUF1214; KEGG: oca:OCAR_6618 hypothetical protein YP_003755238.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: bid:Bind_1627 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003755239.1 PFAM: protein of unknown function UPF0153; KEGG: rhi:NGR_c07710 hypothetical protein YP_003755240.1 PFAM: protein of unknown function DUF264; KEGG: azc:AZC_1105 hypothetical protein YP_003755241.1 KEGG: pla:Plav_0903 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_003755242.1 KEGG: syd:Syncc9605_0583 signal peptide peptidase A YP_003755243.1 KEGG: swd:Swoo_3382 hypothetical protein YP_003755244.1 KEGG: acr:Acry_1960 HAD family hydrolase YP_003755245.1 KEGG: pla:Plav_0905 HK97 family phage prohead protease; TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97 YP_003755246.1 KEGG: pla:Plav_0906 HK97 family phage major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_003755247.1 KEGG: pla:Plav_0908 phiE125 gp8 hypothetical protein YP_003755248.1 KEGG: aap:NT05HA_0498 phage head-tail adaptor, TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein YP_003755249.1 KEGG: scl:sce6510 ExbD/TolR-like translocation protein YP_003755250.1 KEGG: xau:Xaut_3160 hypothetical protein YP_003755251.1 KEGG: pla:Plav_0911 TP901-1 family phage major tail protein; TIGRFAM: phage major tail protein, TP901-1 family; PFAM: Phage major tail protein, TP901-1, subfamily 1 YP_003755252.1 KEGG: pla:Plav_0913 hypothetical protein YP_003755253.1 PFAM: protein of unknown function DUF2376, phage; KEGG: rpe:RPE_1919 hypothetical protein YP_003755254.1 KEGG: xau:Xaut_3164 gene transfer agent (GTA) orfg11 YP_003755255.1 PFAM: conserved hypothetical protein; KEGG: rpa:RPA1903 hypothetical protein YP_003755256.1 PFAM: Phage conserved hypothetical protein, gene transfer agent-like-like; KEGG: pla:Plav_0917 hypothetical protein YP_003755257.1 KEGG: nha:Nham_1425 phage cell wall peptidase, NlpC/P60; TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein YP_003755258.1 KEGG: pla:Plav_0919 gene transfer agent (GTA) like protein YP_003755259.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; KEGG: mch:Mchl_1579 peptidoglycan-binding protein YP_003755260.1 KEGG: hut:Huta_1380 hypothetical protein YP_003755261.1 KEGG: mes:Meso_0894 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003755262.1 KEGG: oca:OCAR_6578 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003755263.1 PFAM: 17 kDa surface antigen; KEGG: pla:Plav_0789 17 kDa surface antigen YP_003755264.1 KEGG: sme:SMc02361 cytochrome C biogenesis transmembrane protein; TIGRFAM: cytochrome C biogenesis protein CcmI; SMART: Tetratricopeptide repeat YP_003755265.1 PFAM: CcmE/CycJ protein; KEGG: azc:AZC_1133 cytochrome c-type biogenesis protein YP_003755266.1 KEGG: sme:SMc02363 cytochrome C biogenesis transmembrane protein; TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein YP_003755267.1 PFAM: cytochrome C biogenesis protein; KEGG: mrd:Mrad2831_4994 cytochrome C biogenesis protein YP_003755268.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bja:blr3130 serine protease DO-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003755269.1 KEGG: rpd:RPD_2012 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein YP_003755270.1 KEGG: mch:Mchl_0375 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003755271.1 KEGG: pla:Plav_0946 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_003755272.1 KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003755273.1 KEGG: pla:Plav_0952 hypothetical protein YP_003755274.1 KEGG: bxe:Bxe_B1627 membrane-associated protein YP_003755275.1 KEGG: rec:RHECIAT_CH0001392 probable two-component sensor histidine kinase protein; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein YP_003755276.1 KEGG: xau:Xaut_4749 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase YP_003755277.1 KEGG: hne:HNE_0585 carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003755278.1 KEGG: rlg:Rleg_6611 drug resistance transporter EmrB/QacA subfamily YP_003755279.1 PFAM: saccharopine dehydrogenase; KEGG: hne:HNE_0588 saccharopine dehydrogenase (NAD+, L-lysine forming) YP_003755280.1 PFAM: cytochrome C class I; KEGG: mpt:Mpe_A2087 sulfite oxidase cytochrome subunit YP_003755281.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mpt:Mpe_A2086 sulfite oxidase SoxC YP_003755282.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mno:Mnod_5984 sulphur oxidation protein SoxZ YP_003755283.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr7359 transcriptional regulator YP_003755284.1 KEGG: azc:AZC_3911 secretion protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003755285.1 KEGG: azc:AZC_3910 hydrophobe/amphiphile efflux-1; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003755286.1 KEGG: bid:Bind_0441 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_003755287.1 PFAM: Extensin family protein; KEGG: eli:ELI_05395 hypothetical protein YP_003755288.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mch:Mchl_0534 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain YP_003755289.1 KEGG: pla:Plav_1409 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003755290.1 KEGG: bph:Bphy_6874 hypothetical protein YP_003755291.1 KEGG: nfi:NFIA_054910 SNF2 family helicase/ATPase YP_003755294.1 PFAM: FAD dependent oxidoreductase; KEGG: bpt:Bpet0858 hypothetical protein YP_003755295.1 KEGG: rsp:RSP_3313 phage integrase family protein; manually curated; PFAM: integrase family protein YP_003755296.1 KEGG: cyn:Cyan7425_1808 XRE family plasmid maintenance system antidote protein YP_003755297.1 KEGG: vpa:VPA0763 sensor kinase CitA YP_003755298.1 KEGG: ath:AT3G46850 subtilase family protein YP_003755299.1 TIGRFAM: restriction alleviation protein, Lar family; KEGG: rsq:Rsph17025_1730 hypothetical protein YP_003755300.1 KEGG: pag:PLES_15711 hypothetical protein YP_003755301.1 KEGG: nve:NEMVE_v1g92522 hypothetical protein YP_003755303.1 KEGG: ttr:Tter_2322 transcriptional regulator, TrmB YP_003755304.1 KEGG: hypothetical protein YP_003755305.1 KEGG: vha:VIBHAR_01963 hypothetical protein YP_003755306.1 KEGG: oca:OCAR_5559 hypothetical protein YP_003755307.1 KEGG: swi:Swit_4824 phage repressor YP_003755308.1 KEGG: nwi:Nwi_2379 hypothetical protein YP_003755309.1 KEGG: ssl:SS1G_10932 hypothetical protein YP_003755310.1 KEGG: mch:Mchl_0002 chromosomal replication initiation protein YP_003755311.1 KEGG: rpc:RPC_4607 CheA signal transduction histidine kinases YP_003755313.1 KEGG: mno:Mnod_6985 hypothetical protein YP_003755314.1 KEGG: pfs:pQBR0370 hypothetical protein YP_003755315.1 SMART: DEAD-like helicase; KEGG: pfs:pQBR0371 helicase YP_003755317.1 KEGG: dac:Daci_3368 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_003755318.1 KEGG: hne:HNE_3354 hypothetical protein YP_003755319.1 KEGG: cpi:Cpin_4904 asparagine synthase (glutamine-hydrolyzing) YP_003755320.1 KEGG: bcv:Bcav_0946 transposase IS3/IS911 family protein YP_003755321.1 KEGG: bbt:BBta_2039 RND family mulitdrug efflux protein YP_003755322.1 KEGG: vvi:100256322 hypothetical protein LOC100256322 YP_003755323.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: pap:PSPA7_4452 DNA adenine methyltransferase YP_003755324.1 KEGG: mea:Mex_1p3981 hypothetical protein YP_003755326.1 KEGG: atc:AGR_C_1668 hypothetical 12.4 KDA protein in MucR 5'region (ORF2) YP_003755327.1 KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase YP_003755328.1 KEGG: ame:413092 similar to Cdep CG31536-PA, isoform A YP_003755329.1 KEGG: bln:Blon_1259 allergen V5/TPX-1 family protein YP_003755330.1 KEGG: pfo:Pfl01_4702 acyltransferase 3 YP_003755331.1 KEGG: pha:PSHAa1748 chondroitin AC/alginate lyase YP_003755332.1 KEGG: nha:Nham_0595 hypothetical protein YP_003755334.1 KEGG: abi:Aboo_1457 hypothetical protein YP_003755335.1 KEGG: der:Dere_GG14392 GG14392 gene product from transcript GG14392-RA YP_003755336.1 KEGG: pntA; NAD(P)(+) transhydrogenase (AB-specific), subunit alpha YP_003755337.1 KEGG: pjd:Pjdr2_0312 hypothetical protein YP_003755338.1 SMART: hypothetical protein; KEGG: cpi:Cpin_4935 5'-3' DNA helicase YP_003755339.1 KEGG: tbr:Tb927.4.4600 hypothetical protein YP_003755341.1 KEGG: pat:Patl_2408 hypothetical protein YP_003755342.1 KEGG: nve:NEMVE_v1g240452 hypothetical protein YP_003755344.1 KEGG: pop:POPTR_416019 hypothetical protein YP_003755345.1 PFAM: peptidoglycan-binding protein; KEGG: smb:smi_0979 hypothetical protein YP_003755347.1 KEGG: spu:580349 similar to NM23-R7 YP_003755348.1 KEGG: oca:OCAR_5574 hypothetical protein YP_003755349.1 KEGG: mgm:Mmc1_2826 hypothetical protein YP_003755350.1 PFAM: terminase GpA; KEGG: spe:Spro_4922 terminase GpA YP_003755351.1 KEGG: wpi:WPa_1306 phage related protein YP_003755352.1 KEGG: lhk:LHK_01658 phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda YP_003755353.1 PFAM: peptidase S49; KEGG: oca:OCAR_5580 peptidase S49 YP_003755354.1 KEGG: mno:Mnod_2459 hypothetical protein YP_003755355.1 KEGG: mno:Mnod_0593 hypothetical protein YP_003755356.1 KEGG: pno:SNOG_00627 hypothetical protein YP_003755357.1 KEGG: tit:Thit_1607 hydrogenase expression/formation protein HypD YP_003755358.1 KEGG: mno:Mnod_2456 hypothetical protein YP_003755359.1 KEGG: bpt:Bpet4417 phage-like protein YP_003755360.1 PFAM: Mu tail sheath family protein; KEGG: bbt:BBta_6592 Mu-like prophage FluMu tail sheath protein YP_003755361.1 KEGG: bbt:BBta_6591 hypothetical protein YP_003755362.1 KEGG: xtr:780107 MKL/myocardin-like 2 YP_003755363.1 KEGG: oan:Oant_0888 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_003755364.1 PFAM: DNA circulation family protein; KEGG: bbt:BBta_6587 Mu-like prophage DNA circulation protein YP_003755365.1 PFAM: Mu P family protein; KEGG: bbt:BBta_6586 Mu-like prophage tail protein YP_003755366.1 KEGG: mno:Mnod_2446 Mu-like prophage protein GP45-like protein YP_003755367.1 manually curated; KEGG: oan:Oant_2301 PaaR repeat-containing protein YP_003755368.1 PFAM: GP46 family protein; KEGG: bbt:BBta_6584 bacteriophage protein, GP46-like protein YP_003755369.1 PFAM: Baseplate J family protein; KEGG: bbt:BBta_6583 bacteriophage protein YP_003755370.1 PFAM: protein of unknown function DUF2313, Mu protein gp48; KEGG: bbt:BBta_6582 hypothetical protein YP_003755371.1 KEGG: bbt:BBta_6581 hypothetical protein YP_003755372.1 KEGG: azl:AZL_025360 hypothetical protein YP_003755373.1 KEGG: tps:THAPSDRAFT_10744 hypothetical protein YP_003755374.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; KEGG: xau:Xaut_3175 hypothetical protein YP_003755375.1 KEGG: ecg:E2348C_2732 predicted endopeptidase YP_003755376.1 KEGG: pno:SNOG_15521 hypothetical protein YP_003755377.1 KEGG: cai:Caci_1610 pyridoxal-5'-phosphate-dependent protein subunit beta YP_003755378.1 KEGG: npu:Npun_R0782 MotA/TolQ/ExbB proton channel YP_003755379.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: pla:Plav_3003 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003755380.1 KEGG: mpo:Mpop_5239 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_003755381.1 PFAM: protein of unknown function DUF2497; KEGG: psl:Psta_4372 hypothetical protein YP_003755382.1 KEGG: mrd:Mrad2831_5431 hypothetical protein YP_003755383.1 KEGG: pla:Plav_3006 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003755384.1 KEGG: abo:ABO_0848 hypothetical protein YP_003755385.1 PFAM: peptidase M48 Ste24p; KEGG: sjp:SJA_C1-07870 Zn-dependent protease YP_003755386.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: pla:Plav_3010 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003755387.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mno:Mnod_5367 Sel1 domain protein repeat-containing protein YP_003755388.1 KEGG: rsp:RSP_2657 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase YP_003755389.1 KEGG: mpo:Mpop_3583 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003755390.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mes:Meso_1814 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region YP_003755391.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: nha:Nham_1758 arginyl-tRNA synthetase YP_003755392.1 PFAM: sporulation domain protein; KEGG: bbt:BBta_4421 hypothetical protein YP_003755393.1 KEGG: mes:Meso_1809 condensin subunit ScpA; manually curated; PFAM: chromosome segregation and condensation protein ScpA YP_003755394.1 KEGG: oca:OCAR_6269 chromosome segregation and condensation protein ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003755395.1 KEGG: azc:AZC_1736 twin-arginine translocation protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003755396.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: bbt:BBta_4416 sec-independent protein secretion pathway component TatB YP_003755397.1 KEGG: mno:Mnod_2185 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003755398.1 TIGRFAM: seryl-tRNA synthetase; KEGG: msl:Msil_0586 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003755399.1 KEGG: fgr:FG09636.1 hypothetical protein YP_003755400.1 KEGG: pla:Plav_3031 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003755402.1 KEGG: rpb:RPB_2736 peptidase M23B; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003755403.1 PFAM: protein of unknown function DUF815; KEGG: xau:Xaut_4247 hypothetical protein YP_003755404.1 KEGG: bhe:BH05640 hypothetical protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003755405.1 KEGG: rpe:RPE_2907 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003755406.1 KEGG: pla:Plav_3037 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003755407.1 PFAM: protein of unknown function DUF498; KEGG: atc:AGR_C_2875 hypothetical protein YP_003755408.1 KEGG: met:M446_2494 squalene/phytoene synthase YP_003755409.1 KEGG: nha:Nham_1323 hypothetical protein YP_003755410.1 TIGRFAM: gid protein; KEGG: rpa:RPA2827 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A YP_003755411.1 KEGG: rpd:RPD_3706 hypothetical protein YP_003755412.1 KEGG: rpc:RPC_2648 manganese transporter MntH; TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein YP_003755413.1 PFAM: protein of unknown function DUF2157, membrane; KEGG: pla:Plav_2660 membrane protein-like protein YP_003755414.1 KEGG: bja:bll0405 hypothetical protein YP_003755415.1 PFAM: endoribonuclease L-PSP; KEGG: apt:APA01_24200 translation initiation inhibitor YjgF YP_003755416.1 KEGG: lel:LELG_03807 hypothetical protein YP_003755417.1 KEGG: hba:Hbal_0306 hypothetical protein YP_003755418.1 KEGG: met:M446_0624 VrrB protein YP_003755419.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: sme:SMc01780 membrane-bound proton-translocating pyrophosphatase; PFAM: inorganic H pyrophosphatase YP_003755420.1 KEGG: xcv:XCV2565 hypothetical protein YP_003755421.1 PFAM: SmpA/OmlA domain protein; KEGG: pla:Plav_2919 SmpA/OmlA domain-containing protein YP_003755422.1 KEGG: xau:Xaut_4382 ubiquinol-cytochrome C chaperone YP_003755423.1 PFAM: protein of unknown function DUF177; KEGG: rpb:RPB_2648 hypothetical protein YP_003755424.1 KEGG: oca:OCAR_5875 glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003755425.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: pla:Plav_2923 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003755426.1 TIGRFAM: integration host factor, subunit alpha; PFAM: histone family protein DNA-binding protein; KEGG: mag:amb2355 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein YP_003755427.1 KEGG: oca:OCAR_5878 regulatory protein, MerR; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003755428.1 KEGG: mrd:Mrad2831_0013 4'-phosphopantetheinyl transferase YP_003755429.1 KEGG: bra:BRADO2978 signal peptide YP_003755430.1 PFAM: amino acid permease-associated region; KEGG: bja:bll5532 hypothetical protein YP_003755431.1 KEGG: bra:BRADO2976 alpha/beta-hydrolase family protein YP_003755432.1 KEGG: cli:Clim_0620 glycine cleavage system H protein; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage system protein H YP_003755433.1 KEGG: cdf:CD0723 carbon monoxide dehydrogenase/acetyl-CoA synthase complex, dihydrolipoyl dehydrogenase subunit; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003755434.1 PFAM: OsmC family protein; KEGG: rha:RHA1_ro08941 hypothetical protein YP_003755435.1 KEGG: vap:Vapar_2160 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003755436.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase A domain protein; KEGG: app:CAP2UW1_2103 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein YP_003755437.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2904 major facilitator transporter YP_003755438.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: xau:Xaut_1781 pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003755439.1 KEGG: mrd:Mrad2831_4790 hypothetical protein YP_003755440.1 KEGG: bbt:BBta_5941 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003755441.1 SMART: Calcium-binding EF-hand-containing protein; KEGG: mch:Mchl_2189 signal transduction protein with EFhand domain YP_003755442.1 KEGG: msl:Msil_1566 hypothetical protein YP_003755443.1 KEGG: pcs:Pc21g15650 Pc21g15650 YP_003755444.1 PFAM: GumN family protein; KEGG: mes:Meso_3402 GumN YP_003755445.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: msl:Msil_0482 40-residue YVTN family beta-propeller repeat protein YP_003755446.1 PFAM: polyketide cyclase/dehydrase; KEGG: rpe:RPE_3129 MxaD protein YP_003755447.1 SMART: von Willebrand factor A; KEGG: rpc:RPC_1916 von Willebrand factor, type A YP_003755448.1 KEGG: rpc:RPC_1915 hypothetical protein YP_003755449.1 KEGG: rpe:RPE_3132 von Willebrand factor, type A; PFAM: von Willebrand factor A; SMART: von Willebrand factor A YP_003755450.1 KEGG: rpc:RPC_1913 MxaA protein YP_003755451.1 KEGG: rpc:RPC_1912 hypothetical protein YP_003755452.1 KEGG: rpc:RPC_1911 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: ATPase AAA YP_003755453.1 PFAM: methanol dehydrogenase subunit beta; KEGG: mpo:Mpop_4629 methanol dehydrogenase subunit beta YP_003755454.1 PFAM: cytochrome C class I; KEGG: mea:Mex_1p4536 cytochrome C-L precursor YP_003755455.1 KEGG: rpc:RPC_1908 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003755456.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003755457.1 KEGG: mno:Mnod_8028 hypothetical protein YP_003755458.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpe:RPE_3141 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003755459.1 KEGG: rpc:RPC_1904 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003755460.1 KEGG: sti:Sthe_2402 hypothetical protein YP_003755461.1 KEGG: app:CAP2UW1_2723 hypothetical protein YP_003755462.1 KEGG: dvl:Dvul_0821 calcium-binding EF-hand-containing protein YP_003755463.1 SMART: Helix-turn-helix, AraC domain; KEGG: rce:RC1_3211 AraC family transcriptional regulator protein YP_003755464.1 KEGG: oca:OCAR_6490 ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_003755465.1 PFAM: PepSY-associated TM helix domain protein; KEGG: oca:OCAR_6489 PepSY-associated TM helix domain protein YP_003755466.1 KEGG: rpt:Rpal_2080 hypothetical protein YP_003755467.1 KEGG: mlo:mlr1181 hypothetical protein YP_003755468.1 PFAM: Lycopene beta and epsilon cyclase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bra:BRADO4820 oxidoreductase; NAD(FAD)-dependent dehydrogenases YP_003755469.1 KEGG: mxa:MXAN_2357 hypothetical protein YP_003755470.1 KEGG: vap:Vapar_3187 hypothetical protein YP_003755471.1 KEGG: rba:RB7277 hypothetical protein YP_003755472.1 KEGG: hypothetical protein; PFAM: transcription factor jumonji; SMART: transcription factor jumonji jmjC domain protein YP_003755473.1 KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding YP_003755474.1 PFAM: beta-ketoacyl synthase ; phosphopantetheine-binding; acyl transferase; aminotransferase class-III; KEGG: npu:Npun_R6590 beta-ketoacyl synthase YP_003755475.1 KEGG: npu:Npun_R3023 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding YP_003755476.1 KEGG: bra:BRADO4833 hypothetical protein YP_003755477.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: npu:Npun_R2089 4'-phosphopantetheinyl transferase YP_003755478.1 PFAM: polysaccharide biosynthesis protein; KEGG: bra:BRADO4827 polysaccharide transporter YP_003755479.1 PFAM: glycosyl transferase family 2; KEGG: bra:BRADO4817 glycosyl transferase YP_003755480.1 KEGG: swi:Swit_0848 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003755481.1 KEGG: smd:Smed_4797 hypothetical protein YP_003755482.1 KEGG: bra:BRADO4816 pectin lyase-like (virulence factor-like) YP_003755483.1 PFAM: O-antigen polymerase; KEGG: bra:BRADO4815 exopolysaccharide production protein (ExoQ-like); membrane protein YP_003755484.1 PFAM: acyltransferase 3; KEGG: psl:Psta_3769 acyltransferase 3 YP_003755485.1 PFAM: glycosyl transferase group 1; KEGG: bra:BRADO4826 glycosyltransferase (group 1) YP_003755487.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bid:Bind_2762 lipopolysaccharide biosynthesis protein YP_003755488.1 KEGG: ret:RHE_CH03235 exopolysaccharide export protein; manually curated; PFAM: polysaccharide export protein YP_003755489.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: bra:BRADO4822 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003755490.1 KEGG: pla:Plav_1925 sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003755491.1 KEGG: azc:AZC_0483 trehalose-6-phosphate phophatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_003755492.1 PFAM: PfkB domain protein; KEGG: fph:Fphi_1482 ribokinase YP_003755493.1 PFAM: ROK family protein; KEGG: bph:Bphy_2399 ROK family protein YP_003755494.1 KEGG: mes:Meso_1527 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_003755495.1 PFAM: HWE histidine kinase; KEGG: hne:HNE_0423 sensor histidine kinase YP_003755496.1 PFAM: glycoside hydrolase 15-related; KEGG: nwi:Nwi_3025 glycoside hydrolase 15-related YP_003755497.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; response regulator receiver; PAS fold-3 domain protein; KEGG: bja:bll2598 two-component response regulator; SMART: response regulator receiver YP_003755498.1 KEGG: bja:bll2599 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver YP_003755499.1 KEGG: bid:Bind_3241 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003755500.1 KEGG: gdj:Gdia_1254 hypothetical protein YP_003755501.1 KEGG: swi:Swit_3925 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003755502.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: nwi:Nwi_0328 amylo-alpha-1,6-glucosidase YP_003755503.1 PFAM: glycosyl transferase group 1; KEGG: bid:Bind_1230 glycosyl transferase group 1 YP_003755504.1 KEGG: rpe:RPE_2821 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein YP_003755505.1 KEGG: rpb:RPB_4114 hypothetical protein YP_003755506.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: dds:Ddes_0538 superoxide dismutase copper/zinc binding YP_003755507.1 KEGG: sus:acid_1393 fis family transcriptional regulator YP_003755508.1 PFAM: polyketide cyclase/dehydrase; KEGG: msl:Msil_2543 hypothetical protein YP_003755509.1 KEGG: msl:Msil_3144 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003755510.1 KEGG: msl:Msil_3151 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein YP_003755511.1 KEGG: oan:Oant_2510 hypothetical protein YP_003755512.1 KEGG: mno:Mnod_5211 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003755513.1 PFAM: glycosyl transferase group 1; KEGG: mpo:Mpop_1808 glycosyl transferase group 1 YP_003755514.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: nwi:Nwi_1414 polysaccharide export protein YP_003755515.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpe:RPE_2845 lipopolysaccharide biosynthesis YP_003755516.1 PFAM: polysaccharide deacetylase; KEGG: pla:Plav_2994 polysaccharide deacetylase YP_003755517.1 KEGG: oca:OCAR_5889 hypothetical protein YP_003755518.1 PFAM: cytochrome oxidase assembly; KEGG: oan:Oant_2502 cytochrome oxidase assembly YP_003755519.1 SMART: semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: rpa:RPA2491 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding YP_003755520.1 PFAM: integral membrane protein TerC; KEGG: rpe:RPE_4103 integral membrane protein TerC YP_003755521.1 PFAM: ribosomal protein S9; KEGG: oan:Oant_2496 30S ribosomal protein S9 YP_003755522.1 KEGG: xau:Xaut_4344 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003755523.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: xau:Xaut_3191 6-pyruvoyl tetrahydropterin synthase YP_003755524.1 KEGG: oca:OCAR_4785 exported protein of unknown function YP_003755525.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rpt:Rpal_3104 enoyl-CoA hydratase YP_003755526.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dar:Daro_3011 glyoxalase/bleomycin resistance protein/dioxygenase YP_003755527.1 KEGG: ddc:Dd586_2991 CoA-binding protein; PFAM: CoA-binding protein; SMART: CoA-binding protein YP_003755528.1 KEGG: ace:Acel_1272 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; PFAM: GTP cyclohydrolase II YP_003755529.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bra:BRADO4697 acetyltransferase YP_003755530.1 KEGG: bra:BRADO4696 alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase YP_003755531.1 KEGG: avi:Avi_2021 hypothetical protein YP_003755532.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: bra:BRADO3181 sulfur oxidation protein (SoxZ) YP_003755533.1 KEGG: tdn:Suden_0261 thiosulfate-binding protein SoxY YP_003755534.1 PFAM: Flavocytochrome C sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome C sulphide dehydrogenase flavin-binding YP_003755535.1 PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: slt:Slit_1861 protein of unknown function DUF1974 YP_003755536.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; enoyl-CoA hydratase/isomerase; KEGG: nha:Nham_1087 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_003755537.1 KEGG: pfs:PFLU0655 thiolase; TIGRFAM: acetyl-CoA acetyltransferase YP_003755538.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: mlo:mll4091 fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase YP_003755539.1 TIGRFAM: glucan exporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: atc:AGR_C_4944 beta-(1-->2)glucan export ATP-binding protein ChvA (attachment protein); SMART: ATPase AAA YP_003755540.1 PFAM: cytochrome B561; KEGG: bxe:Bxe_B2745 cytochrome b561 YP_003755541.1 KEGG: mno:Mnod_4661 hypothetical protein YP_003755542.1 PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_4662 glycosyl transferase group 1 YP_003755543.1 KEGG: azc:AZC_4167 hypothetical protein YP_003755544.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: xau:Xaut_2316 alcohol dehydrogenase YP_003755545.1 KEGG: xau:Xaut_2317 glucosyltransferase MdoH YP_003755546.1 TIGRFAM: methyltransferase FkbM family; KEGG: mno:Mnod_5570 methyltransferase FkbM family YP_003755547.1 KEGG: azc:AZC_3949 hypothetical protein YP_003755548.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; KEGG: azc:AZC_0099 HAD-superfamily hydrolase YP_003755549.1 KEGG: bay:RBAM_034190 polar chromosome segregation protein YP_003755550.1 KEGG: mch:Mchl_4298 dihydrofolate reductase YP_003755551.1 KEGG: msl:Msil_1586 cytochrome C protein YP_003755552.1 PFAM: aldehyde dehydrogenase; KEGG: bid:Bind_0016 aldehyde dehydrogenase YP_003755553.1 KEGG: pna:Pnap_3729 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003755554.1 KEGG: mxa:MXAN_2606 sensor histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_003755555.1 KEGG: reh:H16_A3120 SAM-dependent methyltransferase YP_003755556.1 KEGG: rme:Rmet_2949 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003755557.1 KEGG: xau:Xaut_1939 glutamate--putrescine ligase; PFAM: glutamine synthetase YP_003755558.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr6533 ABC transporter polyamine transporter, periplasmic protein YP_003755559.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; KEGG: atc:AGR_C_1086 polyamine transporter PotG; SMART: AAA ATPase YP_003755560.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mes:Meso_0165 binding-protein-dependent transport systems inner membrane component YP_003755561.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mes:Meso_0166 binding-protein-dependent transport systems inner membrane component YP_003755562.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_2421 FAD dependent oxidoreductase YP_003755563.1 PFAM: protein of unknown function DUF1109; KEGG: ara:Arad_4851 hypothetical protein YP_003755564.1 manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: rpt:Rpal_2016 RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003755565.1 KEGG: rde:RD1_2328 hypothetical protein YP_003755566.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: msl:Msil_2953 formate dehydrogenase YP_003755567.1 KEGG: saz:Sama_2843 hypothetical protein YP_003755568.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: xau:Xaut_3908 lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM protein YP_003755569.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mes:Meso_0968 glutathione-dependent formaldehyde-activating, GFA YP_003755570.1 manually curated; KEGG: cak:Caul_0762 lysine--tRNA ligase; PFAM: tRNA synthetase class II (D K and N) YP_003755571.1 KEGG: xau:Xaut_2531 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_003755572.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: mno:Mnod_5578 molybdenum cofactor synthesis domain protein; SMART: molybdopterin binding domain YP_003755573.1 KEGG: azc:AZC_2203 molybdopterin cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003755574.1 KEGG: xau:Xaut_4375 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase YP_003755575.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: rpt:Rpal_3235 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003755576.1 KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003755577.1 KEGG: sme:SMc03822 hypothetical protein; PFAM: phosphoglycerate mutase; SMART: phosphoglycerate mutase YP_003755578.1 KEGG: hms:HMU02670 serine transporter YP_003755579.1 TIGRFAM: anthranilate synthase component I; KEGG: xau:Xaut_4378 anthranilate synthase component I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_003755580.1 KEGG: rpt:Rpal_3234 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003755581.1 TIGRFAM: triosephosphate isomerase; KEGG: pla:Plav_3166 triose-phosphate isomerase; PFAM: triosephosphate isomerase YP_003755582.1 KEGG: pen:PSEEN0161 alginate regulatory protein AlgP YP_003755584.1 KEGG: rpe:RPE_2594 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003755585.1 KEGG: bra:BRADO1438 signal peptide YP_003755586.1 TIGRFAM: CTP synthase; KEGG: mes:Meso_1634 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003755587.1 KEGG: cytochrome b561 YP_003755588.1 KEGG: rpt:Rpal_3223 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003755589.1 KEGG: FAD linked oxidase C-terminal domain protein YP_003755590.1 KEGG: mpo:Mpop_1803 hypothetical protein YP_003755591.1 PFAM: ABC transporter; KEGG: bja:blr6191 ABC transporter permease YP_003755592.1 KEGG: bbt:BBta_5947 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003755593.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; aldehyde dehydrogenase; KEGG: mno:Mnod_5316 40-residue YVTN family beta-propeller repeat protein; SMART: hypothetical protein YP_003755594.1 KEGG: bra:BRADO5462 hypothetical protein YP_003755595.1 KEGG: met:M446_5014 hypothetical protein YP_003755596.1 PFAM: NMT1/THI5 like domain protein; KEGG: azl:AZL_a05750 ABC transporter substrate-binding protein YP_003755597.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: psa:PST_2932 sulfonate ABC transporter permease protein YP_003755598.1 KEGG: azl:AZL_a05770 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003755599.1 PFAM: protein of unknown function DUF556; KEGG: rcu:RCOM_0113510 hypothetical protein YP_003755600.1 KEGG: mag:amb2297 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SMART: dihydroneopterin aldolase YP_003755601.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: msl:Msil_2395 aspartate/glutamate/uridylate kinase YP_003755602.1 PFAM: protein of unknown function DUF447; KEGG: gbe:GbCGDNIH1_0766 hypothetical protein YP_003755603.1 KEGG: chu:CHU_3286 SAM-dependent methyltransferase YP_003755604.1 KEGG: mch:Mchl_2198 hypothetical protein YP_003755605.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; KEGG: mrd:Mrad2831_0965 H4MPT-linked C1 transfer pathway protein YP_003755606.1 PFAM: histidine biosynthesis protein; KEGG: gbe:GbCGDNIH1_0769 phosphoribosylformimino-5-aminoimidazole carboxamide isomerase family protein YP_003755607.1 KEGG: xau:Xaut_0032 formaldehyde-activating protein; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_003755608.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: met:M446_5782 triphosphoribosyl-dephospho-CoA protein YP_003755609.1 KEGG: mno:Mnod_6005 alpha-L-glutamate ligase, RimK family; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_003755610.1 TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; KEGG: mea:Mex_1p1763 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase YP_003755611.1 PFAM: protein of unknown function DUF201; KEGG: msl:Msil_2386 protein of unknown function DUF201 YP_003755612.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: msl:Msil_2385 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_003755613.1 KEGG: msl:Msil_2384 beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein YP_003755614.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mrd:Mrad2831_2778 transcriptional coactivator/pterin dehydratase YP_003755615.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: mno:Mnod_5981 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003755616.1 PFAM: cytochrome C class I; KEGG: mno:Mnod_4583 cytochrome c class I YP_003755617.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: bbt:BBta_6304 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_003755618.1 PFAM: coenzyme PQQ synthesis D; KEGG: rpc:RPC_0882 coenzyme PQQ synthesis D YP_003755619.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: msl:Msil_1739 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein YP_003755620.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: azl:AZL_a09970 pyrroloquinoline quinone biosynthesis protein B YP_003755621.1 KEGG: mex:Mext_1820 coenzyme PQQ biosynthesis protein A; TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_003755622.1 KEGG: bpl:BURPS1106A_A0321 hypothetical protein YP_003755623.1 PFAM: flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: met:M446_5483 flavodoxin/nitric oxide synthase YP_003755624.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mno:Mnod_1804 sulfite reductase (NADPH) hemoprotein, beta-component YP_003755625.1 PFAM: ParB-like nuclease; KEGG: bid:Bind_2187 ParB-like nuclease YP_003755626.1 KEGG: rpe:RPE_3556 recombination factor protein RarA; PFAM: ATPase AAA; SMART: ATPase AAA YP_003755627.1 PFAM: protein of unknown function DUF583; KEGG: ecb:100061543 chondroitin sulfate proteoglycan 4 YP_003755628.1 manually curated; TIGRFAM: pseudouridine synthase, RluA family; KEGG: oan:Oant_2083 RluA family pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein YP_003755629.1 KEGG: mes:Meso_0938 hypothetical protein YP_003755630.1 KEGG: gph1; phosphoglycolate phosphatase-1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003755631.1 PFAM: ATP12 ATPase; KEGG: rpa:RPA3207 ATP12 ATPase YP_003755632.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: met:M446_5725 hypothetical protein YP_003755633.1 KEGG: scb:SCAB_3601 hypothetical protein YP_003755634.1 PFAM: carboxyl transferase; KEGG: pla:Plav_2771 carboxyl transferase YP_003755635.1 KEGG: sti:Sthe_2959 hypothetical protein YP_003755636.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: psl:Psta_4108 hypothetical protein YP_003755637.1 PFAM: monooxygenase FAD-binding; KEGG: rpe:RPE_3593 monooxygenase, FAD-binding protein YP_003755638.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpc:RPC_1857 6-phosphogluconate dehydrogenase, NAD-binding YP_003755639.1 PFAM: MgtC/SapB transporter; KEGG: nha:Nham_0456 MgtC/SapB transporter YP_003755640.1 PFAM: major facilitator superfamily MFS_1; KEGG: avi:Avi_0513 MFS permease YP_003755641.1 TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; haloacid dehalogenase; KEGG: rpt:Rpal_1856 ATPase P; SMART: TRASH domain protein YP_003755642.1 PFAM: protein of unknown function DUF156; KEGG: oca:OCAR_7636 hypothetical protein YP_003755643.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ara:Arad_10009 hypothetical protein YP_003755644.1 KEGG: rpe:RPE_1623 hypothetical protein YP_003755645.1 KEGG: nca:Noca_2595 peptidase C60, sortase A and B YP_003755646.1 PFAM: SCP-like extracellular; KEGG: eba:ebA3441 hypothetical protein YP_003755647.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, subunit alpha; KEGG: atc:AGR_C_2144 topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003755648.1 KEGG: zma:100281488 LOC100281488 YP_003755649.1 PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: bja:blr5039 arginyl-tRNA-protein transferase YP_003755650.1 KEGG: bfa:Bfae_09020 hypothetical protein YP_003755651.1 KEGG: bbt:BBta_5959 hypothetical protein YP_003755652.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: mno:Mnod_4793 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003755653.1 KEGG: lif:LinJ31.1690 hypothetical protein YP_003755654.1 KEGG: mno:Mnod_6027 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_003755655.1 PFAM: aminotransferase class I and II; KEGG: xau:Xaut_3522 aminotransferase YP_003755656.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: oan:Oant_1917 homoserine dehydrogenase YP_003755657.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: bmr:BMI_I1284 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_003755658.1 KEGG: ara:Arad_2163 single-stranded-DNA-specific exonuclease protein; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003755659.1 PFAM: integrase family protein; KEGG: mch:Mchl_4758 integrase family protein YP_003755660.1 KEGG: dsh:Dshi_0989 hypothetical protein YP_003755661.1 KEGG: vex:VEA_001988 fatty oxidation complex alpha subunit FadB YP_003755662.1 KEGG: bgl:bglu_1g21240 P42.1; manually curated; PFAM: Pathogenesis-related transcriptional factor and ERF protein; HNH endonuclease YP_003755663.1 KEGG: aco:Amico_0795 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003755664.1 KEGG: cyb:CYB_1946 hypothetical protein YP_003755666.1 KEGG: bfo:BRAFLDRAFT_67299 hypothetical protein YP_003755667.1 KEGG: det:DET0983 translation initiation factor IF-2 YP_003755668.1 KEGG: mdo:100019691 similar to FRAP-related protein YP_003755670.1 KEGG: dmo:Dmoj_GI23121 GI23121 gene product from transcript GI23121-RA YP_003755671.1 KEGG: olu:OSTLU_24147 predicted protein YP_003755673.1 KEGG: cre:CHLREDRAFT_167801 hypothetical protein YP_003755674.1 KEGG: mth:MTH1028 hypothetical protein YP_003755675.1 PFAM: HNH endonuclease; KEGG: sye:Syncc9902_1436 HNH nuclease YP_003755676.1 KEGG: tva:TVAG_348550 Sec23/Sec24 zinc finger family protein YP_003755677.1 KEGG: lhk:LHK_01497 exonuclease; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase family YP_003755678.1 PFAM: ERF family protein; KEGG: rpi:Rpic_2344 ERF family protein YP_003755680.1 KEGG: sma:SAV_2858 M protein YP_003755683.1 KEGG: lga:LGAS_1167 trigger factor YP_003755684.1 KEGG: bpt:Bpet2666 chloride channel protein-related protein YP_003755685.1 KEGG: ere:EUBREC_0387 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003755686.1 KEGG: mdo:100018023 similar to ATPase, class I, type 8B, member 3 YP_003755687.1 KEGG: pmu:PM0674 hypothetical protein YP_003755688.1 KEGG: saa:SAUSA300_1957 phiPVL ORF046-like protein YP_003755689.1 KEGG: sro:Sros_7095 hypothetical protein YP_003755690.1 KEGG: mlo:mlr7272 hypothetical protein YP_003755691.1 KEGG: dfe:Dfer_3702 protein of unknown function DUF1549 YP_003755693.1 KEGG: tmz:Tmz1t_0342 ATPase AAA YP_003755694.1 KEGG: dol:Dole_0697 NusG antitermination factor YP_003755696.1 KEGG: bph:Bphy_1887 lambda family phage portal protein YP_003755697.1 KEGG: pat:Patl_2643 KDPG and KHG aldolase YP_003755699.1 KEGG: rru:Rru_A0712 XRE family transcriptional regulator YP_003755700.1 KEGG: ade:Adeh_3620 hypothetical protein YP_003755701.1 KEGG: slt:Slit_1566 plectin YP_003755702.1 KEGG: mma:MM_2295 surface layer protein B YP_003755704.1 KEGG: ppa:PAS_chr2-2_0118 hypothetical protein YP_003755705.1 manually curated; KEGG: hap:HAPS_1583 phage small subunit terminase YP_003755706.1 KEGG: ppu:PP_3045 ClpP protease YP_003755707.1 KEGG: mrd:Mrad2831_5694 hypothetical protein YP_003755708.1 KEGG: rlt:Rleg2_1147 hypothetical protein YP_003755709.1 KEGG: yen:YE0694 adhesin YP_003755710.1 KEGG: osa:4336532 hypothetical protein YP_003755711.1 KEGG: mrb:Mrub_0518 type IV secretory pathway VirB4 protein YP_003755712.1 KEGG: rpi:Rpic_2295 hypothetical protein YP_003755713.1 KEGG: ypb:YPTS_3441 outer membrane autotransporter YP_003755714.1 KEGG: pan:PODANSg4525 hypothetical protein YP_003755715.1 KEGG: rcu:RCOM_1968810 DNA transfer protein gp7 YP_003755716.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bgl:bglu_1g21240 P42.1 YP_003755717.1 KEGG: azc:AZC_0850 hypothetical protein YP_003755718.1 KEGG: mes:Meso_0239 hypothetical protein YP_003755719.1 KEGG: mea:Mex_1p1304 hypothetical protein YP_003755720.1 KEGG: ang:An10g00420 hypothetical protein YP_003755721.1 KEGG: syw:SYNW2350 hypothetical protein YP_003755722.1 KEGG: abc:ACICU_02150 hypothetical protein YP_003755723.1 KEGG: gym:GYMC10_3997 hypothetical protein YP_003755724.1 KEGG: nha:Nham_2362 hypothetical protein; PFAM: Pathogenesis-related transcriptional factor and ERF protein; HNH endonuclease; SMART: HNH nuclease YP_003755725.1 KEGG: nfa:nfa8110 hypothetical protein YP_003755726.1 KEGG: bmj:BMULJ_02960 type IV pilus assembly protein YP_003755727.1 KEGG: bwe:BcerKBAB4_4213 ankyrin repeat-containing protein YP_003755729.1 KEGG: Ser/Thr phosphatase family protein YP_003755730.1 KEGG: tcu:Tcur_3375 protein of unknown function DUF308 membrane YP_003755731.1 KEGG: pkn:PKH_094500 MAEBL YP_003755732.1 KEGG: rce:RC1_1176 transglycosylase associated protein YP_003755733.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; cytochrome C biogenesis protein transmembrane region; KEGG: bxe:Bxe_B0816 transmembrane protein YP_003755734.1 PFAM: protein of unknown function DUF1194; KEGG: mch:Mchl_1533 protein of unknown function DUF1194 YP_003755735.1 KEGG: xau:Xaut_0033 hypothetical protein YP_003755736.1 KEGG: mea:Mex_1p1755 formyltransferase/hydrolase complex Fhc subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase subunit alpha domain protein YP_003755737.1 TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; KEGG: mch:Mchl_2160 formylmethanofuran--tetrahydromethanopterin formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr) YP_003755738.1 KEGG: mca:MCA2859 formylmethanofurane dehydrogenase, A subunit, TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: amidohydrolase YP_003755739.1 KEGG: nhl:Nhal_0015 formylmethanofuran dehydrogenase subunit B YP_003755740.1 PFAM: polyketide cyclase/dehydrase; KEGG: mpo:Mpop_1790 conserved hypothetical protein; signal peptide YP_003755741.1 KEGG: bja:bll4706 hypothetical protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein YP_003755742.1 KEGG: mpo:Mpop_1768 hypothetical protein YP_003755743.1 KEGG: rde:RD1_0883 hypothetical protein YP_003755744.1 SMART: beta-lactamase; KEGG: xau:Xaut_1782 beta-lactamase domain-containing protein YP_003755745.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: xau:Xaut_1781 pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003755746.1 KEGG: mrd:Mrad2831_0509 hypothetical protein YP_003755747.1 KEGG: rpe:RPE_0853 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003755748.1 KEGG: bra:BRADO5467 hypothetical protein YP_003755749.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: scl:sce5468 glutathione-regulated potassium-efflux system protein KefC YP_003755750.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: rpc:RPC_2897 transketolase; SMART: transketolase YP_003755751.1 KEGG: mea:Mex_1p2369 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003755752.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: rpb:RPB_4376 cytochrome C biogenesis protein, transmembrane region YP_003755753.1 KEGG: mno:Mnod_4968 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003755754.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: met:M446_5803 membrane protein involved in aromatic hydrocarbon degradation YP_003755755.1 KEGG: mno:Mnod_4959 hypothetical protein YP_003755756.1 PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_2503 major facilitator transporter YP_003755757.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: mno:Mnod_4475 mandelate racemase/muconate lactonizing protein YP_003755758.1 PFAM: Apolipoprotein A1/A4/E; KEGG: rhi:NGR_c16680 kinesin-like protein YP_003755759.1 KEGG: pla:Plav_2517 Hpt protein; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_003755760.1 PFAM: ferredoxin; KEGG: bja:bll5885 ferrodoxin YP_003755761.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bra:BRADO5079 thioredoxin reductase, FAD/NAD(P)-binding YP_003755762.1 KEGG: pla:Plav_2433 protein involved in cellulose biosynthesis (CelD)-like protein YP_003755763.1 KEGG: gwc:GWCH70_1179 inner-membrane translocator YP_003755764.1 KEGG: bfu:BC1G_12951 hypothetical protein YP_003755765.1 KEGG: rpd:RPD_3459 hypothetical protein YP_003755766.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003755767.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003755768.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: rpe:RPE_0902 glucan biosynthesis protein G YP_003755769.1 KEGG: mpo:Mpop_3962 glucosyltransferase MdoH YP_003755770.1 PFAM: conserved hypothetical protein; KEGG: bja:blr7254 hypothetical protein YP_003755771.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rlg:Rleg_2178 protein of unknown function DUF463 YcjX family protein YP_003755772.1 KEGG: spu:593722 hypothetical LOC593722 YP_003755773.1 KEGG: xau:Xaut_0519 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase YP_003755774.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: xau:Xaut_1265 protein of unknown function zinc metallopeptidase YP_003755775.1 PFAM: sporulation domain protein; KEGG: nha:Nham_1783 hypothetical protein YP_003755776.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: azc:AZC_1718 glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_003755777.1 KEGG: bmr:BMI_II576 D-fructose-6-phosphate amidotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_003755778.1 PFAM: sporulation domain protein; KEGG: spw:SPCG_1750 cell wall surface anchor family protein YP_003755779.1 PFAM: protein of unknown function DUF502; KEGG: mlo:mll0832 hypothetical protein YP_003755780.1 KEGG: mlo:mlr0830 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; SMART: DEAD-like helicase ; helicase YP_003755781.1 PFAM: protein of unknown function DUF339; KEGG: mch:Mchl_4531 protein of unknown function DUF339 YP_003755782.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase; helicase domain protein; TRCF domain protein; KEGG: azc:AZC_1221 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase YP_003755783.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_3087 AMP-dependent synthetase and ligase YP_003755784.1 PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_3093 extracellular solute-binding protein YP_003755785.1 PFAM: invasion associated locus B family protein; KEGG: bja:bll4589 hypothetical protein YP_003755786.1 KEGG: mrd:Mrad2831_1655 hemimethylated DNA binding protein; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_003755787.1 PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_3870 HpcH/HpaI aldolase YP_003755788.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pzu:PHZ_p0173 acyl-CoA dehydrogenase YP_003755789.1 KEGG: sep:SE2249 streptococcal hemagglutinin protein YP_003755790.1 PFAM: protein of unknown function DUF486; KEGG: mes:Meso_1652 hypothetical protein YP_003755791.1 KEGG: kra:Krad_1453 protein of unknown function DUF477 YP_003755792.1 KEGG: sce:YER093C Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p), a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain YP_003755793.1 KEGG: mrd:Mrad2831_1341 hypothetical protein YP_003755794.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: protein of unknown function DUF883 ElaB YP_003755795.1 KEGG: tkm:TK90_0656 GTP-binding protein HSR1-related protein YP_003755796.1 KEGG: met:M446_4861 lipid A biosynthesis lauroyl acyltransferase; manually curated; PFAM: lipid A biosynthesis acyltransferase YP_003755797.1 KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003755798.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003755799.1 KEGG: bch:Bcen2424_6260 Sel1 domain-containing protein YP_003755800.1 KEGG: pla:Plav_3142 septum formation initiator YP_003755801.1 KEGG: mpo:Mpop_2911 hypothetical protein YP_003755802.1 KEGG: cai:Caci_4566 membrane protein of uknown function UCP014873 YP_003755803.1 KEGG: sti:Sthe_0729 RNA polymerase, sigma 70 subunit, RpoD subfamily YP_003755804.1 KEGG: rlg:Rleg_1802 hypothetical protein YP_003755805.1 PFAM: cyclase/dehydrase; KEGG: mlo:mlr0393 hypothetical protein YP_003755806.1 PFAM: pentapeptide repeat protein; KEGG: gbe:GbCGDNIH1_1873 pentapeptide repeat-containing protein YP_003755807.1 PFAM: damage inducible protein CinA; KEGG: msl:Msil_0525 CinA domain protein YP_003755808.1 KEGG: bph:Bphy_5178 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003755809.1 PFAM: cation efflux protein; KEGG: mes:Meso_4140 transporter YP_003755810.1 KEGG: mlo:mll0395 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003755811.1 KEGG: pla:Plav_3131 nifR3 family TIM-barrel protein; TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS YP_003755812.1 KEGG: xau:Xaut_4400 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003755813.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: azc:AZC_3086 nitrogen assimilation regulatory protein NtrC; SMART: response regulator receiver; ATPase AAA YP_003755814.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: azc:AZC_3084 nitrogen regulation protein NtrY; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003755815.1 KEGG: mno:Mnod_6543 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003755816.1 PFAM: aminotransferase class IV; KEGG: xau:Xaut_4394 aminotransferase class IV YP_003755817.1 KEGG: xau:Xaut_4393 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003755818.1 KEGG: rle:RL2285 GTP-binding protein; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_003755819.1 KEGG: pla:Plav_3170 hypothetical protein; manually curated; PFAM: monooxygenase FAD-binding YP_003755820.1 KEGG: bra:BRADO3851 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_003755821.1 KEGG: pna:Pnap_4852 hypothetical protein YP_003755822.1 KEGG: lch:Lcho_1797 hypothetical protein YP_003755823.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_3268 acetyltransferase YP_003755824.1 KEGG: pap:PSPA7_0354 hypothetical protein YP_003755825.1 KEGG: ank:AnaeK_4223 hypothetical protein YP_003755826.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: rlt:Rleg2_2224 bifunctional deaminase-reductase domain protein YP_003755827.1 KEGG: mes:Meso_1756 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003755828.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mno:Mnod_5836 permease YjgP/YjgQ family protein YP_003755829.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mrd:Mrad2831_0555 permease YjgP/YjgQ family protein YP_003755830.1 PFAM: organic solvent tolerance protein; OstA family protein; KEGG: azc:AZC_4323 organic solvent tolerance protein-like precursor YP_003755831.1 PFAM: SurA domain; KEGG: rpt:Rpal_3474 SurA domain YP_003755832.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: rpt:Rpal_3475 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_003755833.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: mes:Meso_1762 dimethyladenosine transferase; SMART: ribosomal RNA adenine methylase transferase-like YP_003755834.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bra:BRADO3317 guanylate kinase; PFAM: guanylate kinase YP_003755835.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mag:amb0747 hypothetical protein YP_003755836.1 PFAM: aminodeoxychorismate lyase; KEGG: rpt:Rpal_3481 aminodeoxychorismate lyase YP_003755837.1 KEGG: rpt:Rpal_3482 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase YP_003755838.1 KEGG: nha:Nham_2352 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003755839.1 KEGG: xau:Xaut_3115 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003755840.1 KEGG: rpd:RPD_2983 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase YP_003755841.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nha:Nham_3678 glyoxalase/bleomycin resistance protein/dioxygenase YP_003755842.1 KEGG: hau:Haur_0515 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_003755843.1 KEGG: mgi:Mflv_3597 prolipoprotein diacylglyceryl transferase YP_003755844.1 KEGG: pla:Plav_3361 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like YP_003755845.1 KEGG: mag:amb2101 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003755846.1 KEGG: rpd:RPD_2987 hypothetical protein YP_003755847.1 KEGG: oan:Oant_0566 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like YP_003755848.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: msl:Msil_0416 replicative DNA helicase; SMART: ATPase AAA YP_003755849.1 TIGRFAM: alanine racemase; KEGG: rpe:RPE_3334 alanine racemase; PFAM: alanine racemase domain protein YP_003755850.1 TIGRFAM: DNA repair protein RadA; PFAM: DnaB domain protein helicase; KEGG: nwi:Nwi_2015 DNA repair protein RadA; SMART: ATPase AAA YP_003755851.1 PFAM: colicin V production protein; KEGG: azc:AZC_0534 uncharacterized membrane protein YP_003755852.1 KEGG: bid:Bind_2311 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003755853.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mno:Mnod_4628 short-chain dehydrogenase/reductase SDR YP_003755854.1 PFAM: protein of unknown function DUF930; KEGG: nha:Nham_0170 hypothetical protein YP_003755855.1 KEGG: bid:Bind_1532 metal-dependent hydrolase YP_003755856.1 KEGG: nwi:Nwi_1461 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003755857.1 KEGG: rhi:NGR_c16040 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M) YP_003755858.1 SMART: ATPase AAA; KEGG: pla:Plav_3112 DNA replication ATPase YP_003755859.1 TIGRFAM: thymidylate kinase; KEGG: pzu:PHZ_c1605 thymidylate kinase; PFAM: thymidylate kinase YP_003755860.1 KEGG: mea:Mex_1p3122 penicillin binding protein, beta-lactamase/transpeptidase-like superfamily; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003755861.1 KEGG: bmr:BMI_I991 lipoprotein A family protein; TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; sporulation domain protein YP_003755862.1 PFAM: integrase family protein; KEGG: nmu:Nmul_A0922 phage integrase YP_003755863.1 KEGG: lma:LmjF34.0690 hypothetical protein YP_003755864.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bmr:BMI_II1049 phage excisionase YP_003755865.1 KEGG: oca:OCAR_6148 virulence-associated protein E YP_003755866.1 TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: dia:Dtpsy_3221 phage/plasmid primase, P4 family; SMART: primase P4 YP_003755867.1 KEGG: xau:Xaut_4833 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003755868.1 KEGG: nwi:Nwi_3130 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003755869.1 KEGG: xau:Xaut_3974 hypothetical protein YP_003755870.1 KEGG: sye:Syncc9902_0017 hypothetical protein YP_003755871.1 PFAM: cation efflux protein; KEGG: oca:OCAR_6177 cation efflux permease YP_003755872.1 KEGG: rru:Rru_A1026 MerR family transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003755873.1 KEGG: bmi:BMEA_A1674 outer membrane protein Omp31 YP_003755874.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: oca:OCAR_4872 H3U YP_003755875.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0957 TonB-dependent receptor YP_003755876.1 PFAM: periplasmic binding protein; KEGG: nha:Nham_0956 periplasmic binding protein YP_003755877.1 PFAM: luciferase; KEGG: nha:Nham_0958 luciferase-like YP_003755878.1 PFAM: transporter permease; KEGG: nha:Nham_0954 transporter permease YP_003755879.1 KEGG: nha:Nham_0955 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003755880.1 KEGG: eli:ELI_04750 hypothetical protein YP_003755881.1 KEGG: cai:Caci_8233 hypothetical protein YP_003755882.1 PFAM: transcriptional regulator PadR family protein; KEGG: sli:Slin_6512 PadR family transcriptional regulator YP_003755883.1 KEGG: nmu:Nmul_A1285 cupin region; manually curated; PFAM: cupin YP_003755884.1 KEGG: ddi:DDBDRAFT_0217139 hypothetical protein YP_003755886.1 KEGG: bid:Bind_2062 hypothetical protein YP_003755887.1 KEGG: hut:Huta_2122 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_003755888.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: hba:Hbal_2118 cobyrinic acid ac-diamide synthase YP_003755889.1 KEGG: rpc:RPC_4740 hypothetical protein YP_003755890.1 KEGG: mno:Mnod_4585 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_003755891.1 KEGG: bpd:BURPS668_A1670 AMP-binding domain-containing protein YP_003755892.1 TIGRFAM: enolase; KEGG: rru:Rru_A1885 phosphopyruvate hydratase; PFAM: Enolase-like YP_003755893.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ank:AnaeK_3374 glutathione-dependent formaldehyde-activating GFA YP_003755894.1 KEGG: hne:HNE_0531 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003755895.1 KEGG: mfa:Mfla_2600 hypothetical protein YP_003755896.1 PFAM: thioesterase superfamily protein; KEGG: bbt:BBta_4125 hypothetical protein YP_003755897.1 KEGG: dhd:Dhaf_1545 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003755898.1 PFAM: radical SAM protein; KEGG: bph:Bphy_0044 radical SAM domain-containing protein YP_003755899.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: pla:Plav_3150 6-pyruvoyl tetrahydropterin synthase YP_003755900.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: rpt:Rpal_3217 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003755901.1 KEGG: mno:Mnod_1552 VrrB protein YP_003755902.1 PFAM: pirin; KEGG: mdi:METDI0066 pirin-like protein YP_003755903.1 PFAM: protein of unknown function DUF1311; KEGG: rhi:NGR_c25020 urease-associated protein YP_003755904.1 PFAM: protein of unknown function DUF992; KEGG: oca:OCAR_7171 hypothetical protein YP_003755905.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); threonyl/alanyl tRNA synthetase SAD; TGS domain protein; anticodon-binding domain protein; KEGG: msl:Msil_3538 threonyl-tRNA synthetase; SMART: threonyl/alanyl tRNA synthetase SAD YP_003755906.1 KEGG: tkm:TK90_0176 glycogen/starch/alpha-glucan phosphorylase YP_003755907.1 PFAM: protein of unknown function DUF37; KEGG: pla:Plav_2667 hypothetical protein YP_003755908.1 KEGG: prw:PsycPRwf_1942 hypothetical protein YP_003755909.1 KEGG: mrd:Mrad2831_4640 NifU domain-containing protein YP_003755910.1 TIGRFAM: GTP cyclohydrolase I; KEGG: pzu:PHZ_c0417 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003755911.1 KEGG: oan:Oant_2159 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_003755912.1 PFAM: patatin; KEGG: xau:Xaut_1647 patatin YP_003755913.1 KEGG: pla:Plav_2661 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003755914.1 PFAM: rhomboid family protein; KEGG: pla:Plav_2653 rhomboid family protein YP_003755915.1 PFAM: protein of unknown function DUF1457; KEGG: mes:Meso_1724 hypothetical protein YP_003755916.1 PFAM: type IV pilus assembly PilZ; KEGG: mrd:Mrad2831_4632 type IV pilus assembly PilZ YP_003755917.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: azc:AZC_3670 transglutaminase-like cysteine peptidase YP_003755918.1 KEGG: pla:Plav_2634 hexapaptide repeat-containing transferase YP_003755919.1 KEGG: oan:Oant_1927 hypothetical protein YP_003755920.1 KEGG: rhi:NGR_c13220 serine acetyltransferase, CysE; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein YP_003755921.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_2620 enoyl-CoA hydratase YP_003755922.1 PFAM: polysaccharide deacetylase; KEGG: azc:AZC_1060 polysaccharide deacetylase YP_003755923.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mag:amb3944 hypothetical protein YP_003755924.1 PFAM: dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; manually curated; KEGG: azc:AZC_4341 B12-dependent methionine synthase; TIGRFAM: methionine synthase YP_003755925.1 PFAM: homocysteine S-methyltransferase; KEGG: pmy:Pmen_2159 B12-dependent methionine synthase YP_003755926.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: met:M446_4365 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003755927.1 KEGG: bmt:BSUIS_A1504 methyltransferase type 11; PFAM: methyltransferase type 11; regulatory protein ArsR; SMART: regulatory protein ArsR YP_003755928.1 KEGG: fal:FRAAL4892 methyltransferase YP_003755929.1 PFAM: toluene tolerance family protein; KEGG: pla:Plav_2398 toluene tolerance family protein YP_003755930.1 KEGG: bfo:BRAFLDRAFT_90440 hypothetical protein YP_003755931.1 KEGG: bbt:BBta_0007 hypothetical protein YP_003755932.1 KEGG: pla:Plav_2392 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003755933.1 PFAM: protein of unknown function DUF1022; KEGG: pla:Plav_2310 hypothetical protein YP_003755934.1 KEGG: rsk:RSKD131_2975 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003755935.1 KEGG: sru:SRU_0793 hypothetical protein YP_003755936.1 KEGG: pla:Plav_2312 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003755937.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: azc:AZC_1145 carbamoyl-phosphate synthase large subunit; SMART: MGS domain protein YP_003755938.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr2687 fosmidomycin resistance protein YP_003755939.1 KEGG: mmi:MMAR_5455 hypothetical protein YP_003755940.1 KEGG: bid:Bind_1052 peptidase M22 glycoprotease YP_003755941.1 KEGG: pla:Plav_2314 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain YP_003755942.1 PFAM: protein of unknown function; KEGG: bte:BTH_II0619 GatB/YqeY family protein YP_003755943.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; DNA primase, DnaB-helicase binding domain; TOPRIM domain protein; KEGG: bra:BRADO1353 DNA primase; SMART: Toprim sub domain protein YP_003755944.1 KEGG: pla:Plav_2317 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 non-essential domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2 YP_003755945.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: vap:Vapar_4718 ethyl tert-butyl ether degradation EthD YP_003755946.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rpc:RPC_1206 GreA/GreB family elongation factor YP_003755947.1 PFAM: protein of unknown function UPF0047; KEGG: msl:Msil_2118 protein of unknown function UPF0047 YP_003755948.1 PFAM: protein of unknown function DUF1486; KEGG: har:HEAR2043 hypothetical protein YP_003755949.1 KEGG: pde:Pden_2129 hypothetical protein YP_003755950.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nar:Saro_1044 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003755951.1 PFAM: protein of unknown function DUF541; KEGG: pde:Pden_1932 hypothetical protein YP_003755952.1 PFAM: citrate transporter; KEGG: divalent ion symporter YP_003755953.1 KEGG: tcr:504081.50 mucin-associated surface protein (MASP) YP_003755954.1 KEGG: oca:OCAR_6547 membrane protein; manually curated; PFAM: protein of unknown function DUF454 YP_003755955.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azl:AZL_d04650 hypothetical protein YP_003755956.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: oca:OCAR_7167 L-lactate dehydrogenase YP_003755957.1 PFAM: protein of unknown function DUF369; KEGG: sfu:Sfum_3204 hypothetical protein YP_003755958.1 PFAM: beta-ketoacyl synthase; KEGG: rru:Rru_A0045 3-oxoacyl-[acyl-carrier-protein] synthase II YP_003755959.1 PFAM: phosphopantetheine-binding; KEGG: mlo:mlr4951 NodF YP_003755960.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rru:Rru_A1312 AMP-dependent synthetase and ligase YP_003755961.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bbt:BBta_3498 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003755962.1 KEGG: rpa:RPA1995 hypothetical protein YP_003755963.1 KEGG: mch:Mchl_5220 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003755964.1 KEGG: pla:Plav_1103 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003755965.1 PFAM: UspA domain protein; KEGG: rxy:Rxyl_2521 hypothetical protein YP_003755967.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mes:Meso_1462 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; PFAM: DAHP synthetase class II YP_003755968.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eat:EAT1b_1814 short-chain dehydrogenase/reductase SDR YP_003755969.1 KEGG: msl:Msil_0122 glutathione-disulfide reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003755970.1 PFAM: protein of unknown function DUF2059; KEGG: xau:Xaut_3222 hypothetical protein YP_003755971.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: msl:Msil_0120 ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_003755972.1 KEGG: mes:Meso_1458 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_003755973.1 KEGG: afr:AFE_0363 hypothetical protein YP_003755974.1 KEGG: msl:Msil_0077 membrane transporter YP_003755975.1 KEGG: reu:Reut_A2882 lipoprotein YP_003755976.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ara:Arad_4067 peptide methionine sulfoxide reductase protein; PFAM: methionine sulfoxide reductase A YP_003755977.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pzu:PHZ_c3319 ornithine decarboxylase YP_003755978.1 KEGG: rba:RB617 WD-40 repeat-containing regulatory protein YP_003755980.1 KEGG: bja:bll4731 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_003755981.1 KEGG: ade:Adeh_4032 general secretory system II, protein E-like YP_003755982.1 KEGG: bmr:BMI_I948 oxidoreductase, PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003755983.1 KEGG: bmr:BMI_I865 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003755984.1 PFAM: glutathione S-transferase domain; KEGG: mlo:mll0559 glutathione S-transferase YP_003755985.1 PFAM: nuclease (SNase domain protein); KEGG: mlo:mll0560 succinoglycan biotynthesis protein ExoI YP_003755986.1 KEGG: rpb:RPB_3395 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003755987.1 KEGG: mrd:Mrad2831_1975 transmembrane signal peptide protein YP_003755988.1 KEGG: mrd:Mrad2831_0576 hypothetical protein YP_003755989.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; KEGG: pla:Plav_1053 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_003755990.1 PFAM: protein of unknown function DUF81; KEGG: atc:AGR_C_3499 hypothetical protein YP_003755991.1 manually curated; TIGRFAM: TIM-barrel protein, yjbN family; KEGG: bja:blr3734 tRNA-dihydrouridine synthase A; PFAM: dihydrouridine synthase DuS YP_003755992.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: xau:Xaut_5027 MOSC domain-containing protein YP_003755993.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: mrd:Mrad2831_0508 methanol/ethanol family PQQ-dependent dehydrogenase; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003755994.1 KEGG: nhl:Nhal_1084 regulatory protein GntR HTH; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003755995.1 KEGG: mlo:mll6632 Fnr-type transcriptional regulator; PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003755996.1 PFAM: periplasmic binding protein; KEGG: met:M446_4715 periplasmic binding protein YP_003755997.1 KEGG: azl:AZL_000720 hypothetical protein YP_003755998.1 PFAM: protein of unknown function DUF2130; KEGG: rpb:RPB_0215 hypothetical protein YP_003755999.1 KEGG: mno:Mnod_4915 formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_003756000.1 KEGG: bmr:BMI_I1417 hypothetical protein YP_003756001.1 PFAM: ApbE family lipoprotein; KEGG: bbt:BBta_6013 nitrous oxide reductase accessory protein NosX (required for nitrous oxide reduction), ApbE-like lipoprotein YP_003756002.1 PFAM: NosL family protein; KEGG: rpt:Rpal_2355 NosL family protein YP_003756003.1 KEGG: bbt:BBta_6011 copper ABC transporter permease protein NosY YP_003756004.1 KEGG: bbt:BBta_6010 copper ABC transporter ATP-binding protein NosF; PFAM: ABC transporter; SMART: ATPase AAA YP_003756005.1 KEGG: bja:blr0316 periplasmic copper-binding precursor; PFAM: periplasmic copper-binding; SMART: carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat YP_003756006.1 KEGG: oca:OCAR_5030 nitrous-oxide reductase; PFAM: cytochrome C oxidase subunit II YP_003756007.1 PFAM: FMN-binding domain protein; KEGG: met:M446_2862 FMN-binding domain-containing protein YP_003756008.1 KEGG: bja:bll0313 hypothetical protein YP_003756009.1 KEGG: kfl:Kfla_4282 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003756010.1 KEGG: swi:Swit_1007 short-chain dehydrogenase/reductase SDR YP_003756011.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: xau:Xaut_2793 outer membrane autotransporter; SMART: Autotransporter beta- domain protein YP_003756012.1 KEGG: pmy:Pmen_3932 hypothetical protein YP_003756013.1 PFAM: type IV pilus assembly PilZ; KEGG: drm:Dred_1474 type IV pilus assembly PilZ YP_003756014.1 KEGG: bcs:BCAN_A0513 beta-lactamase domain-containing protein YP_003756015.1 PFAM: protein of unknown function DUF1499; KEGG: rpd:RPD_1266 hypothetical protein YP_003756016.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: azc:AZC_1197 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxine 5'-phosphate oxidase dimerisation-like YP_003756017.1 KEGG: aha:AHA_3058 17 kDa antigen YP_003756018.1 KEGG: ddc:Dd586_0395 SinR-like protein YP_003756019.1 KEGG: vei:Veis_1811 regulatory proteins, IclR YP_003756021.1 KEGG: pkn:PKH_142610 RNA-binding protein YP_003756022.1 KEGG: mca:MCA0033 DNA-damage-inducible protein D YP_003756023.1 KEGG: ara:Arad_2240 LexA repressor; TIGRFAM: LexA repressor; PFAM: peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein YP_003756024.1 KEGG: pla:Plav_3179 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003756025.1 KEGG: bmr:BMI_I1158 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003756026.1 KEGG: sme:SMc02087 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: citrate synthase YP_003756027.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: met:M446_0645 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003756028.1 PFAM: protein of unknown function DUF1009; KEGG: bja:bll4848 hypothetical protein YP_003756029.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: met:M446_0643 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003756030.1 KEGG: smd:Smed_1140 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003756031.1 KEGG: met:M446_0641 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_003756032.1 KEGG: azc:AZC_1701 outer membrane protein precursor; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_003756033.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: rpt:Rpal_3261 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_003756034.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: swi:Swit_0466 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003756035.1 PFAM: phosphatidate cytidylyltransferase; KEGG: xau:Xaut_4434 phosphatidate cytidylyltransferase YP_003756036.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: pla:Plav_3192 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003756037.1 KEGG: pla:Plav_3193 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003756038.1 KEGG: pla:Plav_3194 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003756039.1 KEGG: mno:Mnod_1697 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003756040.1 KEGG: rpc:RPC_2436 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003756041.1 KEGG: acp:A2cp1_4222 hypothetical protein YP_003756042.1 KEGG: oan:Oant_4124 hypothetical protein YP_003756043.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: bbt:BBta_4522 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein YP_003756044.1 KEGG: mch:Mchl_1194 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003756045.1 KEGG: nha:Nham_2196 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_003756046.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: sal:Sala_1230 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); prolyl-tRNA synthetase, class II-like; anticodon-binding domain protein YP_003756047.1 PFAM: protein of unknown function DUF1467; KEGG: bid:Bind_1782 hypothetical protein YP_003756048.1 TIGRFAM: methylmalonyl-CoA epimerase; KEGG: mno:Mnod_4142 methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003756049.1 KEGG: bbt:BBta_4546 metallo-beta-lactamase family hydrolase; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein YP_003756050.1 KEGG: pla:Plav_3212 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_003756051.1 KEGG: mes:Meso_1035 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/ubiquinone/plastoquinone (complex I) YP_003756052.1 KEGG: pla:Plav_3214 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/ubiquinone/plastoquinone (complex I) YP_003756053.1 KEGG: azc:AZC_1679 NADH-plastoquinone oxidoreductase chain 5 protein; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/ubiquinone/plastoquinone (complex I); NADH-ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003756054.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ret:RHE_CH01615 NADH dehydrogenase subunit K YP_003756055.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ret:RHE_CH01614 NADH dehydrogenase subunit J YP_003756056.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: pla:Plav_3218 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003756057.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rle:RL1708 NADH dehydrogenase subunit H YP_003756058.1 KEGG: mlo:mll1362 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH-quinone oxidoreductase chain G ; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YP_003756059.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: bbt:BBta_4556 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_003756060.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: sil:SPO2780 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003756061.1 KEGG: vap:Vapar_5757 protein of unknown function DUF6 transmembrane YP_003756062.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: nwi:Nwi_1885 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003756063.1 PFAM: thioesterase superfamily protein; KEGG: oca:OCAR_5925 hypothetical protein YP_003756064.1 KEGG: fal:FRAAL6779 hypothetical protein YP_003756065.1 KEGG: mno:Mnod_4128 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003756066.1 KEGG: lpf:lpl1942 hypothetical protein YP_003756067.1 TIGRFAM: NADH-quinone oxidoreductase subunit beta; KEGG: azc:AZC_1668 NADH ubiqionone oxidoreductase chain B protein; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003756068.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mes:Meso_1022 NADH dehydrogenase subunit A YP_003756069.1 KEGG: ang:An06g01080 hypothetical protein YP_003756070.1 KEGG: gdj:Gdia_2028 hypothetical protein YP_003756071.1 KEGG: nhl:Nhal_1707 hypothetical protein YP_003756072.1 KEGG: xau:Xaut_1894 CHASE2 sensor protein; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003756073.1 PFAM: FecR protein; KEGG: mpo:Mpop_1557 hypothetical protein YP_003756074.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bbt:BBta_4485 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003756075.1 PFAM: Domain of unknown function DUF1993; KEGG: pap:PSPA7_0055 hypothetical protein YP_003756076.1 KEGG: bbt:BBta_5411 hypothetical protein YP_003756077.1 KEGG: ftm:FTM_0702 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003756078.1 SMART: peptidase S16; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bid:Bind_2182 ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein YP_003756079.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; Clp ATPase-like; zinc finger C4 domain protein; KEGG: pla:Plav_3231 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase AAA YP_003756080.1 KEGG: mes:Meso_1169 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_003756081.1 KEGG: pla:Plav_3235 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type YP_003756082.1 KEGG: rhodanese; PFAM: Rhodanese domain protein; SMART: rhodanese YP_003756083.1 PFAM: glutathione peroxidase; KEGG: azl:AZL_027970 glutathione peroxidase YP_003756084.1 KEGG: ptm:GSPATT00026891001 hypothetical protein YP_003756085.1 PFAM: secretion protein HlyD; KEGG: bbt:BBta_7064 hypothetical protein YP_003756086.1 KEGG: rsq:Rsph17025_0175 hypothetical protein YP_003756087.1 KEGG: pen:PSEEN2415 error-prone DNA polymerase YP_003756088.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_1648 esterase YP_003756089.1 KEGG: cin:100181106 hypothetical protein LOC100181106 YP_003756090.1 KEGG: bra:BRADO0993 ABC transporter permease protein; manually curated; PFAM: protein of unknown function DUF214 YP_003756091.1 KEGG: met:M446_1554 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003756092.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pla:Plav_0786 short-chain dehydrogenase/reductase SDR YP_003756093.1 PFAM: phosphoglycerate mutase; KEGG: rhi:NGR_c05180 phosphoglycerate mutase YP_003756094.1 TIGRFAM: chorismate synthase; KEGG: rpd:RPD_1314 chorismate synthase; PFAM: chorismate synthase YP_003756095.1 KEGG: lbz:LbrM17_V2.0710 hypothetical protein YP_003756096.1 PFAM: (uracil-5)-methyltransferase; KEGG: hne:HNE_2781 23S rRNA (uracil-5-)-methyltransferase RumA YP_003756097.1 SMART: RNA-binding S4 domain protein; manually curated; TIGRFAM: hemolysin A; KEGG: rru:Rru_A2620 hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein YP_003756098.1 KEGG: bra:BRADO0884 signal peptide YP_003756099.1 KEGG: pla:Plav_0781 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase YP_003756100.1 KEGG: bqu:BQ03530 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit YP_003756101.1 PFAM: histone deacetylase superfamily; KEGG: msl:Msil_1308 histone deacetylase superfamily YP_003756102.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_4340 short chain dehydrogenase YP_003756103.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bja:bll7955 enoyl-CoA hydratase/isomerase YP_003756104.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: oca:OCAR_6891 acyl-CoA dehydrogenase YP_003756105.1 KEGG: mrd:Mrad2831_3830 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003756106.1 KEGG: afv:AFLA_139530 hypothetical protein YP_003756107.1 PFAM: acyltransferase 3; KEGG: mrd:Mrad2831_0502 acyltransferase 3 YP_003756108.1 PFAM: Clp domain protein; KEGG: hsl:OE3611R transducer protein BasT YP_003756109.1 PFAM: protein of unknown function DUF159; KEGG: rhi:NGR_c08610 hypothetical protein YP_003756110.1 PFAM: conserved hypothetical protein; KEGG: rpb:RPB_1127 hypothetical protein YP_003756111.1 KEGG: pla:Plav_0756 hypothetical protein YP_003756112.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: pla:Plav_0754 lysine exporter protein LysE/YggA YP_003756113.1 KEGG: smd:Smed_0707 hypothetical protein YP_003756114.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr7232 hypothetical protein YP_003756115.1 TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: rpb:RPB_1118 dihydroorotase; PFAM: amidohydrolase YP_003756116.1 KEGG: mrd:Mrad2831_3987 folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003756117.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: rpc:RPC_4332 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_003756118.1 KEGG: rpd:RPD_1235 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003756119.1 KEGG: rpb:RPB_1112 hypothetical protein YP_003756120.1 TIGRFAM: quinolinate synthetase complex, subunit alpha; KEGG: rpb:RPB_1107 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_003756121.1 KEGG: rpb:RPB_1106 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003756122.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: oan:Oant_0431 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003756123.1 KEGG: afv:AFLA_054150 cycloheximide resistance protein YP_003756124.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: xau:Xaut_0494 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilizing protein; PEP-utilising protein mobile region YP_003756125.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: atc:AGR_C_165 hypothetical protein YP_003756126.1 PFAM: ribonuclease T2; KEGG: xau:Xaut_2731 ribonuclease T2 YP_003756127.1 KEGG: scb:SCAB_4621 hypothetical protein YP_003756128.1 KEGG: cak:Caul_3758 hypothetical protein YP_003756129.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_1974 short chain dehydrogenase YP_003756130.1 manually curated; KEGG: amt:Amet_1486 cell wall hydrolase/autolysin YP_003756131.1 KEGG: tde:TDE0488 lipoprotein YP_003756132.1 KEGG: bra:BRADO5334 hypothetical protein YP_003756133.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; UvrB/UvrC protein; KEGG: mes:Meso_1975 excinuclease ABC subunit C; SMART: excinuclease ABC C subunit domain protein; DNA-binding protein YP_003756134.1 PFAM: MscS Mechanosensitive ion channel; KEGG: smd:Smed_1800 MscS mechanosensitive ion channel YP_003756135.1 KEGG: mno:Mnod_3714 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003756136.1 KEGG: mrd:Mrad2831_5403 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_003756137.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: dar:Daro_2729 molybdopterin synthase subunit MoaE YP_003756138.1 KEGG: rpc:RPC_2853 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003756139.1 PFAM: diacylglycerol kinase; KEGG: pla:Plav_1994 diacylglycerol kinase YP_003756140.1 KEGG: xau:Xaut_1986 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003756141.1 KEGG: oca:OCAR_7148 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_003756142.1 KEGG: gbe:GbCGDNIH1_0850 hypothetical protein YP_003756143.1 KEGG: sun:SUN_2376 hypothetical protein YP_003756144.1 KEGG: pfl:PFL_2850 hypothetical protein YP_003756145.1 PFAM: protein of unknown function DUF344; KEGG: gur:Gura_2647 hypothetical protein YP_003756146.1 KEGG: sus:acid_4937 calcium/cation antiporter; TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_003756147.1 manually curated; TIGRFAM: sulfate transporter; KEGG: bja:blr2848 sulfate transporter; PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS YP_003756148.1 KEGG: bid:Bind_2452 hypothetical protein YP_003756149.1 KEGG: azl:AZL_b02390 hypothetical protein YP_003756150.1 KEGG: rhi:NGR_b13630 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003756151.1 KEGG: bja:blr3458 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003756152.1 KEGG: bpa:BPP1167 enoyl-(acyl carrier protein) reductase YP_003756153.1 PFAM: UspA domain protein; KEGG: rxy:Rxyl_2521 hypothetical protein YP_003756154.1 KEGG: bja:bll5080 AcrB/AcrD/AcrF family protein; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003756155.1 KEGG: bja:bll5081 multidrug resistance protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003756156.1 PFAM: protein of unknown function UPF0118; KEGG: nha:Nham_0862 hypothetical protein YP_003756157.1 KEGG: sco:SCO5294 secreted protein YP_003756158.1 KEGG: amt:Amet_0213 hypothetical protein YP_003756159.1 KEGG: xau:Xaut_0924 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003756160.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mei:Msip34_2461 hypothetical protein YP_003756161.1 KEGG: mei:Msip34_2462 hypothetical protein YP_003756162.1 KEGG: mei:Msip34_2463 hypothetical protein YP_003756163.1 PFAM: PRC-barrel domain protein; KEGG: mrd:Mrad2831_4630 PRC-barrel domain-containing protein YP_003756164.1 KEGG: mmr:Mmar10_1158 hypothetical protein YP_003756165.1 KEGG: rpd:RPD_0737 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type YP_003756166.1 KEGG: pla:Plav_1526 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003756167.1 PFAM: FixH family protein; KEGG: FixH family protein YP_003756168.1 KEGG: pla:Plav_1528 cytochrome C oxidase cbb3 type accessory protein FixG; TIGRFAM: cytochrome C oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003756169.1 KEGG: rpb:RPB_0014 cytochrome C oxidase cbb3-type, subunit III; TIGRFAM: cytochrome C oxidase cbb3-type, subunit III; PFAM: cytochrome C class I YP_003756170.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: hne:HNE_1230 cytochrome C oxidase cbb3-type, CcoQ subunit YP_003756171.1 KEGG: rpb:RPB_0016 cytochrome C oxidase cbb3-type, subunit II; TIGRFAM: cytochrome C oxidase cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO YP_003756172.1 TIGRFAM: cytochrome C oxidase cbb3-type, subunit I; KEGG: pla:Plav_1532 cytochrome C oxidase cbb3-type, subunit I; PFAM: cytochrome C oxidase subunit I YP_003756173.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0050 enoyl-(acyl carrier protein) reductase YP_003756174.1 KEGG: azc:AZC_2421 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003756175.1 KEGG: azc:AZC_2420 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: MaoC domain protein dehydratase; phosphate acetyl/butaryl transferase YP_003756176.1 PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: bxe:Bxe_C0053 poly-beta-hydroxybutyrate polymerase YP_003756177.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: nwi:Nwi_2890 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Cobalamin-independent synthase MetE domain protein; methionine synthase vitamin-B12 independent YP_003756178.1 PFAM: thioesterase superfamily protein; KEGG: rpt:Rpal_2645 thioesterase superfamily protein YP_003756179.1 KEGG: bid:Bind_0045 hypothetical protein YP_003756180.1 KEGG: bcs:BCAN_A1651 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_003756181.1 KEGG: rru:Rru_A2316 XRE family transcriptional regulator; PFAM: protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; hypothetical protein; SMART: hypothetical protein YP_003756183.1 PFAM: protein of unknown function DUF955; KEGG: rsp:RSP_4244 hypothetical protein YP_003756185.1 KEGG: ecb:100054150 hypothetical protein LOC100054150 YP_003756186.1 KEGG: mea:Mex_1p1601 hypothetical protein YP_003756188.1 KEGG: rsq:Rsph17025_4400 hypothetical protein YP_003756189.1 PFAM: patatin; KEGG: bja:bll7964 hypothetical protein YP_003756190.1 PFAM: citrate transporter; KEGG: msl:Msil_2569 citrate transporter YP_003756191.1 manually curated; KEGG: msl:Msil_1032 hypothetical protein YP_003756192.1 KEGG: xau:Xaut_1329 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003756193.1 PFAM: cytochrome B561; KEGG: pfs:PFLU3913 cytochrome b561 YP_003756194.1 KEGG: smd:Smed_1932 PhzF family phenazine biosynthesis protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_003756195.1 PFAM: NUDIX hydrolase; KEGG: mno:Mnod_0955 NUDIX hydrolase YP_003756196.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: msl:Msil_3011 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003756197.1 KEGG: mes:Meso_1489 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003756198.1 PFAM: glutathione S-transferase domain; KEGG: bbt:BBta_4787 glutathione S-transferase (GST) YP_003756199.1 KEGG: bmr:BMI_I1357 iron compound ABC transporter periplasmic iron compound-binding protein YP_003756200.1 KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region YP_003756201.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: pla:Plav_2463 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003756202.1 PFAM: carbohydrate-selective porin OprB; KEGG: mea:Mex_2p0466 hypothetical protein YP_003756203.1 KEGG: rfr:Rfer_0625 hypothetical protein YP_003756204.1 KEGG: mes:Meso_4276 pseudoazurin; TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein YP_003756205.1 KEGG: mea:Mex_1p5196 ABC transporter fused ATPase and permease domains; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003756206.1 KEGG: ddi:DDBDRAFT_0216653 hypothetical protein; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003756207.1 PFAM: conserved hypothetical protein; KEGG: mno:Mnod_1637 hypothetical protein YP_003756208.1 TIGRFAM: LAO/AO transporter ATPase; PFAM: ArgK protein; KEGG: xau:Xaut_5042 LAO/AO transporter ATPase; SMART: ATPase AAA YP_003756209.1 PFAM: amino acid permease-associated region; KEGG: cja:CJA_1051 amino acid permease YP_003756210.1 PFAM: Iron sulphur domain-containing, CDGSH-type; KEGG: jan:Jann_3396 zinc finger, CDGSH-type YP_003756212.1 KEGG: rlt:Rleg2_1921 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase-like YP_003756213.1 KEGG: azo:azo2163 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003756214.1 KEGG: bbt:BBta_5297 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein YP_003756215.1 KEGG: rpt:Rpal_4304 hypothetical protein YP_003756216.1 PFAM: protein of unknown function DUF892; KEGG: oca:OCAR_5362 hypothetical protein YP_003756217.1 PFAM: protein of unknown function DUF1234; KEGG: xau:Xaut_2551 hypothetical protein YP_003756218.1 PFAM: protein of unknown function DUF1476; KEGG: azc:AZC_2227 hypothetical protein YP_003756219.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bbt:BBta_5409 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003756220.1 KEGG: pla:Plav_2588 phosphoribosylformylglycinamidine synthase, PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_003756221.1 KEGG: lsp:Bsph_1309 hypothetical protein YP_003756222.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: sal:Sala_0591 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003756223.1 KEGG: hne:HNE_1530 hypothetical protein YP_003756224.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlg:Rleg_2347 glyoxalase/bleomycin resistance protein/dioxygenase YP_003756225.1 KEGG: seu:SEQ_0613 glucokinase YP_003756226.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: bra:BRADO2785 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003756227.1 KEGG: rpb:RPB_2929 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_003756228.1 KEGG: cel:M199.5 COLlagen YP_003756229.1 PFAM: protein of unknown function DUF2147; KEGG: xau:Xaut_1034 hypothetical protein YP_003756230.1 KEGG: mex:Mext_1820 coenzyme PQQ biosynthesis protein A; TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_003756231.1 PFAM: BolA family protein; KEGG: met:M446_0006 BolA family protein YP_003756232.1 KEGG: sjp:SJA_C1-28240 monothiol glutaredoxin; TIGRFAM: glutaredoxin; PFAM: glutaredoxin YP_003756233.1 KEGG: bja:blr6726 AcrB/AcrD/AcrF family protein; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003756234.1 KEGG: bja:blr6725 multidrug resistance protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003756235.1 KEGG: oaa:100079982 similar to betacellulin; BTC YP_003756236.1 PFAM: paraquat-inducible protein A; KEGG: ypb:YPTS_2454 PqiA family integral membrane protein YP_003756237.1 PFAM: general substrate transporter; KEGG: xau:Xaut_3353 major facilitator transporter YP_003756238.1 TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: bmc:BAbS19_I07930 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003756239.1 KEGG: edi:EDI_115560 chromosome-associated kinesin KIF4A YP_003756240.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: avi:Avi_1915 tRNA/rRNA methyltransferase YP_003756241.1 KEGG: rlt:Rleg2_1953 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003756242.1 PFAM: methyltransferase type 12; KEGG: gau:GAU_0808 hypothetical protein YP_003756243.1 KEGG: sde:Sde_1827 heat shock protein DnaJ-like YP_003756244.1 TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; threonyl/alanyl tRNA synthetase SAD; KEGG: bmr:BMI_I1212 alanyl-tRNA synthetase; SMART: threonyl/alanyl tRNA synthetase SAD YP_003756245.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: hba:Hbal_0258 RecA protein; SMART: ATPase AAA YP_003756246.1 KEGG: mfa:Mfla_2364 formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_003756247.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: rpt:Rpal_4405 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein YP_003756248.1 KEGG: ret:RHE_CH02327 hypothetical protein YP_003756249.1 KEGG: mrd:Mrad2831_4663 multi-sensor signal transduction histidine kinase YP_003756250.1 KEGG: pla:Plav_2558 TraR/DksA family transcriptional regulator; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type YP_003756251.1 KEGG: rpe:RPE_2031 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003756252.1 KEGG: gob:Gobs_0429 hypothetical protein YP_003756253.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: scl:sce2064 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003756254.1 PFAM: regulatory protein TetR; KEGG: oan:Oant_4225 TetR family transcriptional regulator YP_003756255.1 PFAM: secretion protein HlyD; KEGG: rhi:NGR_c29530 multidrug resistance protein YP_003756256.1 KEGG: mlo:mlr4819 multidrug resistance protein B (drug efflux transporter); TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003756257.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nwi:Nwi_3051 TonB-dependent receptor YP_003756258.1 KEGG: avi:Avi_3464 Acr family transporter YP_003756259.1 KEGG: cyn:Cyan7425_1215 hypothetical protein YP_003756260.1 PFAM: protein of unknown function DUF2076; KEGG: rle:RL3516 hypothetical protein YP_003756261.1 KEGG: isc:IscW_ISCW020284 classical arabinogalactan protein YP_003756262.1 PFAM: protein of unknown function DUF1236; KEGG: mrd:Mrad2831_2945 hypothetical protein YP_003756263.1 KEGG: tcr:504433.20 hypothetical protein YP_003756264.1 PFAM: glutathione S-transferase domain; KEGG: glutathione S-transferase YP_003756265.1 KEGG: pdi:BDI_3126 hypothetical protein YP_003756266.1 KEGG: bja:bll6012 hypothetical protein YP_003756267.1 PFAM: general secretion pathway protein M; KEGG: alv:Alvin_3008 general secretion pathway protein M YP_003756268.1 PFAM: fimbrial assembly family protein; KEGG: noc:Noc_0758 general secretion pathway protein L YP_003756269.1 KEGG: nhl:Nhal_3652 general secretion pathway protein K YP_003756270.1 KEGG: msl:Msil_0915 general secretion pathway protein J YP_003756271.1 KEGG: eba:ebB44 general secretion pathway protein I YP_003756272.1 TIGRFAM: general secretion pathway protein H; KEGG: bbt:BBta_1281 general secretion pathway protein H, GspH YP_003756273.1 KEGG: nhl:Nhal_0441 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_003756274.1 PFAM: type II secretion system F domain; KEGG: nhl:Nhal_0440 type II secretion system protein YP_003756275.1 KEGG: bja:bll6021 general secretion pathway protein E; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA YP_003756276.1 KEGG: xau:Xaut_2106 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_003756277.1 PFAM: peptidase A24A prepilin type IV; KEGG: bja:blr6023 prepilin peptidase YP_003756278.1 KEGG: bra:BRADO3285 AraC/XylS family transcription factor; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003756279.1 PFAM: carboxylesterase type B; KEGG: msl:Msil_2379 carboxylesterase type B YP_003756280.1 PFAM: carboxylesterase type B; KEGG: msl:Msil_3599 carboxylesterase type B YP_003756281.1 KEGG: lbr:LVIS_2054 hypothetical protein YP_003756282.1 KEGG: bra:BRADO3285 AraC/XylS family transcription factor; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003756283.1 KEGG: msl:Msil_3887 hypothetical protein YP_003756284.1 KEGG: msl:Msil_1853 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003756285.1 KEGG: msl:Msil_1852 hypothetical protein YP_003756286.1 PFAM: Mur ligase middle domain protein; KEGG: ppd:Ppro_2742 Mur ligase middle domain-containing protein YP_003756287.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: xau:Xaut_1906 hypothetical protein YP_003756288.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: pla:Plav_3054 queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase YP_003756289.1 KEGG: rec:RHECIAT_CH0002168 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003756290.1 PFAM: protein of unknown function DUF423; KEGG: bid:Bind_3362 hypothetical protein YP_003756291.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: hne:HNE_1405 peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_003756292.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mno:Mnod_5192 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003756293.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: psl:Psta_0102 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein YP_003756294.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: azc:AZC_2326 coenzyme A biosynthesis protein; PFAM: cytidylyltransferase YP_003756295.1 KEGG: bja:blr3114 hypothetical protein YP_003756296.1 KEGG: mno:Mnod_6164 transcriptional regulator, Crp/Fnr family; PFAM: regulatory protein Crp; SMART: regulatory protein Crp YP_003756297.1 KEGG: oca:OCAR_6233 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; manually curated; TIGRFAM: DNA gyrase subunit alpha; SMART: DNA gyrase/topoisomerase IV subunit A YP_003756298.1 PFAM: PRC-barrel domain protein; KEGG: rec:RHECIAT_CH0000940 hypothetical protein YP_003756299.1 PFAM: cytochrome C class I; KEGG: bja:blr6637 cytochrome C YP_003756300.1 KEGG: gdj:Gdia_1776 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003756301.1 KEGG: bja:bll4698 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003756302.1 PFAM: protein of unknown function UPF0153; KEGG: scl:sce0610 hypothetical protein YP_003756303.1 KEGG: smt:Smal_1233 glyoxalase/bleomycin resistance protein/dioxygenase YP_003756304.1 KEGG: mea:Mex_2p0836 hypothetical protein YP_003756305.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: msl:Msil_0879 glutathione-dependent formaldehyde-activating GFA YP_003756306.1 KEGG: pap:PSPA7_2347 two-component sensor YP_003756307.1 KEGG: mar:MAE_16700 hypothetical protein YP_003756308.1 KEGG: rpe:RPE_2890 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter YP_003756309.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: oca:OCAR_5407 3-demethylubiquinone-9 3-methyltransferase YP_003756310.1 KEGG: hypothetical protein YP_003756311.1 KEGG: avn:Avin_17420 hypothetical protein YP_003756312.1 manually curated; KEGG: avn:Avin_17410 hypothetical protein YP_003756313.1 KEGG: rso:RSp1381 PhnA protein alkylphosphonate uptake; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_003756314.1 KEGG: oca:OCAR_5920 hypothetical protein YP_003756316.1 PFAM: carbonic anhydrase; KEGG: nha:Nham_0361 carbonic anhydrase YP_003756317.1 KEGG: svi:Svir_04970 IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase YP_003756318.1 KEGG: krh:KRH_11940 TerC family integral membrane protein YP_003756319.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcg:BCG9842_B2506 short chain dehydrogenase YP_003756320.1 KEGG: nha:Nham_2665 hypothetical protein YP_003756321.1 PFAM: beta-lactamase; KEGG: mmr:Mmar10_2357 beta-lactamase YP_003756322.1 PFAM: major facilitator superfamily MFS_1; KEGG: phe:Phep_2211 major facilitator superfamily MFS_1 YP_003756323.1 KEGG: bgl:bglu_2g09750 PvdI YP_003756325.1 TIGRFAM: TonB family protein; KEGG: rce:RC1_1801 protein TonB YP_003756326.1 PFAM: protein of unknown function DUF72; KEGG: mes:Meso_1394 hypothetical protein YP_003756327.1 KEGG: swi:Swit_4654 peptidase M48, Ste24p YP_003756328.1 KEGG: bja:bll5579 hypothetical protein YP_003756329.1 KEGG: bba:Bd1303 hypothetical protein YP_003756330.1 KEGG: nha:Nham_3495 hypothetical protein YP_003756331.1 KEGG: fal:FRAAL2692 hypothetical protein YP_003756332.1 KEGG: vpr:Vpar_0746 thioesterase superfamily protein YP_003756333.1 PFAM: conserved hypothetical protein; KEGG: bra:BRADO1469 hypothetical protein YP_003756334.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mlo:mll1184 hypothetical protein YP_003756335.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rce:RC1_2026 deoxyribodipyrimidine photolyase family protein YP_003756336.1 KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003756337.1 KEGG: smt:Smal_2560 hypothetical protein YP_003756338.1 KEGG: rpt:Rpal_3313 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003756339.1 PFAM: nitrogen regulatory protein P-II; KEGG: xau:Xaut_3586 nitrogen regulatory protein P-II YP_003756340.1 KEGG: avi:Avi_2375 glutamine synthetase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp YP_003756341.1 KEGG: cvi:CV_1735 ATP-binding/permease fusion ABC transporter YP_003756342.1 PFAM: major facilitator superfamily MFS_1; KEGG: mea:Mex_1p4860 permease of major facilitator transporter (tat pathway signal) YP_003756343.1 PFAM: aminotransferase class I and II; KEGG: mlo:mll7737 histidinol-phosphate aminotransferase YP_003756344.1 PFAM: conserved hypothetical protein; KEGG: ara:Arad_2494 hypothetical protein YP_003756345.1 KEGG: dol:Dole_1153 hypothetical protein YP_003756346.1 KEGG: mgr:MGG_03952 hypothetical protein YP_003756347.1 KEGG: rru:Rru_A2751 hypothetical protein YP_003756348.1 KEGG: act:ACLA_048030 hypothetical protein YP_003756349.1 KEGG: dsa:Desal_2391 hypothetical protein YP_003756350.1 KEGG: azc:AZC_0095 outer membrane lipoprotein-sorting protein YP_003756351.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmy:Pmen_0132 GCN5-related N-acetyltransferase YP_003756352.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_1255 polysaccharide deacetylase YP_003756353.1 TIGRFAM: lipoate-protein ligase B; KEGG: xau:Xaut_4082 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003756354.1 KEGG: sme:SMc04174 signal peptide protein YP_003756355.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mag:amb4341 transcriptional regulator YP_003756356.1 KEGG: bra:BRADO3249 acyl-CoA carboxylase biotin-carrying subunit; alpha chain; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; SMART: biotin carboxylase domain protein YP_003756357.1 KEGG: mlo:mll0880 hypothetical protein YP_003756358.1 KEGG: mdi:METDI1533 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO YP_003756359.1 KEGG: bcs:BCAN_A0676 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003756360.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: mrd:Mrad2831_3455 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003756361.1 TIGRFAM: signal peptidase I; KEGG: xau:Xaut_3880 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_003756362.1 KEGG: bid:Bind_2443 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003756363.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: pla:Plav_2871 pyridoxine 5'-phosphate synthase; PFAM: pyridoxal phosphate biosynthetic protein PdxJ YP_003756364.1 PFAM: protein of unknown function DUF2062; KEGG: pla:Plav_2870 hypothetical protein YP_003756365.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: xau:Xaut_3877 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain YP_003756366.1 KEGG: bid:Bind_2446 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_003756367.1 PFAM: protein of unknown function DUF88; KEGG: rru:Rru_A1859 hypothetical protein YP_003756368.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: pla:Plav_2864 uracil-DNA glycosylase superfamily protein YP_003756369.1 PFAM: redoxin; KEGG: rxy:Rxyl_1080 redoxin YP_003756370.1 KEGG: smpB; SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003756371.1 KEGG: met:M446_0697 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003756372.1 PFAM: lytic transglycosylase catalytic; KEGG: met:M446_0698 lytic transglycosylase catalytic YP_003756373.1 PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_2860 alpha/beta hydrolase fold YP_003756374.1 KEGG: jan:Jann_1177 hypothetical protein YP_003756376.1 PFAM: OmpA/MotB domain protein; KEGG: xau:Xaut_3825 OmpA/MotB domain-containing protein YP_003756377.1 TIGRFAM: siroheme synthase; KEGG: azc:AZC_0234 uroporphyrin-III C-methyltransferase YP_003756378.1 KEGG: msl:Msil_1406 glucose/sorbosone dehydrogenase-like protein YP_003756379.1 KEGG: mch:Mchl_5509 hypothetical protein YP_003756380.1 KEGG: mrd:Mrad2831_0982 transmembrane protein YP_003756382.1 PFAM: CsbD family protein; KEGG: rpb:RPB_1394 CsbD-like YP_003756383.1 KEGG: rci:RCIX2708 FAD-dependent oxidoreductase YP_003756384.1 KEGG: hmg:100202525 similar to predicted protein YP_003756385.1 KEGG: mgr:MGG_08642 hypothetical protein YP_003756387.1 PFAM: secretion protein HlyD; KEGG: spl:Spea_2191 secretion protein HlyD YP_003756388.1 KEGG: spl:Spea_2190 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003756389.1 KEGG: azc:AZC_0972 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_003756390.1 KEGG: msl:Msil_0850 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003756391.1 KEGG: nha:Nham_2813 hypothetical protein YP_003756392.1 KEGG: nwi:Nwi_2417 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003756393.1 PFAM: NnrS family protein; KEGG: nha:Nham_0648 NnrS YP_003756394.1 KEGG: stp:Strop_1886 phenylalanyl-tRNA synthetase, alpha subunit YP_003756395.1 KEGG: mag:amb0011 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_003756396.1 KEGG: ace:Acel_2081 major facilitator transporter YP_003756397.1 KEGG: bmr:BMI_II610 nucleoside diphosphate kinase regulator YP_003756398.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cce:Ccel_0875 coenzyme F390 synthetase-like protein YP_003756400.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: tkm:TK90_2611 metal dependent phosphohydrolase YP_003756401.1 PFAM: protein of unknown function DUF374; KEGG: mes:Meso_0437 hypothetical protein YP_003756402.1 KEGG: rpa:RPA3082 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_003756403.1 PFAM: glycosyl transferase family 2; KEGG: pla:Plav_0424 glycosyl transferase YP_003756404.1 KEGG: rpc:RPC_0729 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003756405.1 PFAM: glycoside hydrolase; KEGG: mag:amb1842 beta-glucosidase-related glycosidase YP_003756406.1 KEGG: nml:Namu_1492 chloride channel core YP_003756407.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: mes:Meso_2843 intradiol ring-cleavage dioxygenase YP_003756409.1 PFAM: excinuclease ABC C subunit domain protein; KEGG: vvy:VV0371 endonuclease YP_003756410.1 KEGG: nwi:Nwi_1402 hypothetical protein YP_003756411.1 PFAM: formate/nitrite transporter; KEGG: pap:PSPA7_2455 formate/nitrate transporter YP_003756412.1 KEGG: sil:SPOA0173 hypothetical protein YP_003756413.1 PFAM: glycosyl transferase family 39; KEGG: met:M446_5864 glycosyl transferase YP_003756414.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: rpd:RPD_0955 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003756415.1 KEGG: bbt:BBta_2303 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003756416.1 KEGG: azc:AZC_4063 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_003756417.1 KEGG: msl:Msil_0255 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003756418.1 KEGG: azc:AZC_4066 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003756419.1 KEGG: rce:RC1_2867 HPr kinase YP_003756420.1 PFAM: PTS system fructose subfamily IIA component; KEGG: xau:Xaut_2848 PTS system fructose subfamily IIA component YP_003756421.1 KEGG: rru:Rru_A3446 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003756422.1 KEGG: TadE family protein; PFAM: von Willebrand factor A; SMART: von Willebrand factor A YP_003756423.1 TIGRFAM: adenosylhomocysteinase; KEGG: bbt:BBta_5698 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_003756424.1 KEGG: oca:OCAR_4487 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003756425.1 PFAM: protein of unknown function UPF0079; aminoglycoside phosphotransferase; KEGG: rpt:Rpal_0081 protein of unknown function UPF0079 YP_003756426.1 PFAM: nucleotidyl transferase; KEGG: bbt:BBta_0088 nucleotidyl transferase family protein YP_003756427.1 TIGRFAM: double-strand break repair protein AddB; KEGG: azl:AZL_027200 double-strand break repair protein YP_003756428.1 KEGG: pla:Plav_0138 double-strand break repair helicase AddA; TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase YP_003756429.1 KEGG: rak:A1C_00010 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain YP_003756430.1 PFAM: isochorismatase hydrolase; KEGG: mfa:Mfla_2540 isochorismatase hydrolase YP_003756431.1 PFAM: protein of unknown function DUF779; KEGG: hau:Haur_1158 hypothetical protein YP_003756432.1 PFAM: protein of unknown function DUF779; KEGG: azl:AZL_d02860 hypothetical protein YP_003756433.1 PFAM: aldehyde dehydrogenase; KEGG: sjp:SJA_C2-05820 aldehyde dehydrogenase YP_003756434.1 TIGRFAM: FolC bifunctional protein; KEGG: pla:Plav_0140 FolC bifunctional protein; PFAM: Mur ligase middle domain protein YP_003756435.1 KEGG: azc:AZC_1024 acetyl-CoA carboxylase carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: carboxyl transferase YP_003756436.1 TIGRFAM: tryptophan synthase, subunit alpha; KEGG: azc:AZC_1020 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_003756437.1 KEGG: atc:AGR_C_28 tryptophan synthase beta chain; TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003756438.1 KEGG: bja:blr0744 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003756439.1 KEGG: rpc:RPC_2258 hypothetical protein YP_003756440.1 KEGG: rec:RHECIAT_CH0000440 hypothetical protein YP_003756441.1 TIGRFAM: integration host factor subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: rpt:Rpal_0069 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_003756442.1 KEGG: mes:Meso_3671 signal peptide peptidase A; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_003756443.1 KEGG: bmr:BMI_I28 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_003756444.1 KEGG: mlo:mlr4654 hypothetical protein YP_003756445.1 KEGG: bja:bll0561 hypothetical protein YP_003756446.1 TIGRFAM: cytidylate kinase; KEGG: mno:Mnod_7108 cytidylate kinase; PFAM: cytidylate kinase region YP_003756447.1 KEGG: msl:Msil_0615 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003756448.1 PFAM: conserved hypothetical protein; KEGG: met:M446_6550 hypothetical protein YP_003756449.1 PFAM: excinuclease ABC C subunit domain protein; KEGG: rle:RL0110 hypothetical protein YP_003756450.1 PFAM: carbon starvation protein CstA; KEGG: rpd:RPD_1551 carbon starvation protein CstA YP_003756451.1 PFAM: protein of unknown function DUF466; KEGG: aav:Aave_4227 hypothetical protein YP_003756452.1 KEGG: oca:OCAR_6476 holdfast attachment protein C (protein HfaC); PFAM: ABC transporter; SMART: ATPase AAA YP_003756453.1 KEGG: rer:RER_53650 oxidase YP_003756454.1 PFAM: heat shock protein Hsp20; KEGG: bid:Bind_0512 heat shock protein HSP20 YP_003756455.1 PFAM: protein of unknown function DUF1150; KEGG: azc:AZC_0347 hypothetical protein YP_003756456.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: azc:AZC_1016 NAD dependent epimerase YP_003756457.1 KEGG: har:HEAR3303 ArsR regulator operon ArsI; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003756458.1 KEGG: mag:amb1828 protein-tyrosine-phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003756459.1 KEGG: oca:OCAR_4230 arsenic resistance protein; TIGRFAM: arsenic resistance protein; PFAM: sodium symporter YP_003756460.1 KEGG: mlo:mll2167 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase YP_003756461.1 KEGG: oca:OCAR_4229 arsenical resistance protein ArsH; TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase YP_003756462.1 PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI_0334 major facilitator transporter YP_003756463.1 KEGG: app:CAP2UW1_2548 delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; Proline dehydrogenase YP_003756464.1 manually curated; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; KEGG: azc:AZC_1589 pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003756465.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV subunit beta; KEGG: mes:Meso_1015 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003756466.1 PFAM: fatty acid desaturase; KEGG: sal:Sala_0465 fatty acid desaturase YP_003756467.1 PFAM: major intrinsic protein; KEGG: spe:Spro_1009 aquaporin Z YP_003756468.1 KEGG: mrd:Mrad2831_0999 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003756469.1 KEGG: tgu:100190018 evectin-2 pleckstrin homology domain containing family B member 2-like YP_003756470.1 KEGG: azc:AZC_3609 HesB protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003756471.1 KEGG: mpo:Mpop_4461 FeS assembly SUF system protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59 YP_003756472.1 KEGG: mes:Meso_1778 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003756473.1 KEGG: nha:Nham_2326 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_003756474.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: pde:Pden_3966 FeS assembly ATPase SufC; SMART: ATPase AAA YP_003756475.1 KEGG: gdj:Gdia_0591 hypothetical protein YP_003756476.1 KEGG: atc:AGR_C_3348 ABC transporter membrane protein XF1476; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003756477.1 TIGRFAM: Rrf2 family transcriptional regulator; KEGG: rce:RC1_1616 cysteine desulfurase; PFAM: aminotransferase class V; protein of unknown function UPF0074 YP_003756478.1 PFAM: peptidase S15; KEGG: bid:Bind_0096 hypothetical protein YP_003756479.1 PFAM: protein of unknown function UPF0075; KEGG: azc:AZC_3618 anhydro-N-acetylmuramic acid kinase YP_003756480.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: rpc:RPC_2845 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003756481.1 KEGG: pla:Plav_3269 hypothetical protein YP_003756482.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: sme:SMc00524 bacterioferritin comigratory protein YP_003756483.1 PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein YP_003756484.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azl:AZL_019520 acetyltransferase YP_003756485.1 KEGG: lch:Lcho_0747 outer membrane adhesin like proteiin YP_003756486.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: tkm:TK90_2079 multiple antibiotic resistance (MarC)-related protein YP_003756487.1 PFAM: Usg family protein; KEGG: pzu:PHZ_c3229 usg protein, probable subunit of phosphoribosylanthranilate isomerase YP_003756488.1 KEGG: met:M446_6435 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003756489.1 KEGG: bja:blr2558 hypothetical protein YP_003756490.1 PFAM: blue (type 1) copper domain protein; KEGG: sil:SPO0256 plastocyanin/azurin family copper binding protein YP_003756491.1 KEGG: mno:Mnod_7690 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein YP_003756492.1 KEGG: pml:ATP_00463 probable oligopeptide ABC transporter substrate-binding protein YP_003756493.1 KEGG: bja:bsl4595 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003756494.1 PFAM: protein of unknown function DUF1285; KEGG: oan:Oant_1610 hypothetical protein YP_003756495.1 KEGG: azc:AZC_3509 methanol dehydrogenase regulator; PFAM: ATPase associated with various cellular activities AAA_3; SMART: ATPase AAA YP_003756496.1 PFAM: protein of unknown function DUF58; KEGG: azc:AZC_3510 hypothetical protein YP_003756497.1 TIGRFAM: conserved hypothetical protein; KEGG: pla:Plav_2232 hypothetical protein YP_003756498.1 PFAM: protein of unknown function DUF1355; KEGG: rpe:RPE_0937 hypothetical protein YP_003756499.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bav:BAV1034 dehydrogenase YP_003756500.1 KEGG: hne:HNE_0811 hypothetical protein YP_003756501.1 KEGG: oca:OCAR_7033 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003756502.1 KEGG: azl:AZL_a10050 osmoprotectant transporter permease YP_003756503.1 KEGG: isc:IscW_ISCW000396 N-terminal acetyltransferase YP_003756504.1 KEGG: bja:blr6669 hypothetical protein YP_003756505.1 PFAM: polysaccharide deacetylase; KEGG: rpe:RPE_2396 polysaccharide deacetylase YP_003756506.1 KEGG: oca:OCAR_4274 hypothetical protein YP_003756507.1 PFAM: protein of unknown function DUF583; KEGG: sil:SPO2231 hypothetical protein YP_003756508.1 KEGG: dma:DMR_34920 hypothetical protein YP_003756509.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: rru:Rru_A1883 magnesium/cobalt transporter CorA YP_003756510.1 KEGG: xau:Xaut_4388 lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_003756511.1 KEGG: bbt:BBta_3870 RlpA family protein; TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A YP_003756512.1 KEGG: xau:Xaut_1900 hypothetical protein YP_003756513.1 KEGG: bbt:BBta_0665 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003756514.1 PFAM: patatin; KEGG: azc:AZC_4576 hypothetical protein YP_003756515.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_1382 metallophosphoesterase YP_003756516.1 KEGG: rpt:Rpal_4874 NUDIX hydrolase YP_003756517.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3230 GCN5-related N-acetyltransferase YP_003756518.1 PFAM: protein of unknown function DUF1217; KEGG: avi:Avi_0969 hypothetical protein YP_003756519.1 KEGG: tgo:TGME49_081420 histone deacetylase YP_003756520.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_1255 polysaccharide deacetylase YP_003756521.1 PFAM: NUDIX hydrolase; KEGG: rhi:NGR_b16940 NTP pyrophosphohydrolase, MutT family YP_003756522.1 KEGG: spu:586898 similar to N-acetyltransferase ESCO1 (Establishment of cohesion 1 homolog 1) YP_003756523.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: mch:Mchl_0962 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase YP_003756524.1 KEGG: bbt:BBta_1827 hypothetical protein YP_003756525.1 TIGRFAM: phosphoserine aminotransferase; KEGG: bid:Bind_1270 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003756526.1 KEGG: mch:Mchl_5304 porin opacity type YP_003756527.1 KEGG: mpo:Mpop_5382 porin opacity type YP_003756528.1 KEGG: rlg:Rleg_3490 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003756529.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: hba:Hbal_1849 cobyrinic acid ac-diamide synthase YP_003756530.1 KEGG: pst:PSPTO_B0024 resolvase YP_003756531.1 PFAM: amino acid permease-associated region; KEGG: rxy:Rxyl_1097 amino acid permease-associated region YP_003756532.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bbt:BBta_7101 hypothetical protein YP_003756533.1 TIGRFAM: dihydropteroate synthase; KEGG: rsk:RSKD131_0172 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003756534.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: mes:Meso_3167 membrane protease FtsH catalytic subunit; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular YP_003756535.1 KEGG: pla:Plav_2125 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_003756536.1 TIGRFAM: tol-pal system protein YbgF; KEGG: pla:Plav_2124 Tol-Pal system YbgF YP_003756537.1 PFAM: OmpA/MotB domain protein; KEGG: bra:BRADO1176 outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) YP_003756538.1 KEGG: rpc:RPC_4748 OmpA/MotB; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_003756541.1 KEGG: oan:Oant_1218 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; hypothetical protein YP_003756542.1 TIGRFAM: protein TolA; KEGG: mpo:Mpop_5303 protein TolA YP_003756543.1 KEGG: azc:AZC_0522 biopolymer transporter; TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR YP_003756544.1 KEGG: oca:OCAR_7293 protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_003756545.1 KEGG: mpo:Mpop_0219 hypothetical protein YP_003756546.1 KEGG: msl:Msil_2630 hypothetical protein YP_003756547.1 KEGG: mlo:msl7316 hypothetical protein YP_003756548.1 PFAM: amino acid permease-associated region; KEGG: smd:Smed_3297 amino acid permease-associated region YP_003756549.1 KEGG: msl:Msil_2627 hypothetical protein YP_003756550.1 KEGG: smd:Smed_3295 hypothetical protein YP_003756551.1 KEGG: rpc:RPC_1924 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_003756552.1 PFAM: metallophosphoesterase; KEGG: rlg:Rleg_3517 metallophosphoesterase YP_003756553.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; ATPase AAA central domain protein; KEGG: bbt:BBta_6906 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_003756554.1 KEGG: dac:Daci_2258 acriflavin resistance protein YP_003756555.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: bja:blr1536 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003756556.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: rpt:Rpal_1289 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003756557.1 KEGG: bcv:Bcav_2280 integral membrane protein YP_003756558.1 KEGG: alcohol dehydrogenase GroES domain protein YP_003756559.1 PFAM: protein of unknown function DUF28; KEGG: sme:SMc03969 hypothetical protein YP_003756560.1 PFAM: metallophosphoesterase; KEGG: pla:Plav_2112 metallophosphoesterase YP_003756561.1 KEGG: oca:OCAR_7307 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003756562.1 PFAM: protein of unknown function DUF710; KEGG: pla:Plav_2110 hypothetical protein YP_003756563.1 KEGG: chl:Chy400_3800 propeptide PepSY amd peptidase M4 YP_003756564.1 SMART: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: xau:Xaut_3075 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003756565.1 KEGG: oan:Oant_1185 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I YP_003756566.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: azc:AZC_0439 hypothetical protein YP_003756567.1 PFAM: thiamine monophosphate synthase; KEGG: hne:HNE_3185 thiamine-phosphate pyrophosphorylase YP_003756568.1 KEGG: oca:OCAR_7315 Sel1; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_003756569.1 PFAM: inositol monophosphatase; KEGG: pla:Plav_2101 inositol-phosphate phosphatase YP_003756570.1 KEGG: oca:OCAR_7317 MotA/TolQ/ExbB proton channel family YP_003756571.1 PFAM: OmpA/MotB domain protein; KEGG: oca:OCAR_7318 hypothetical protein YP_003756572.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter; ABC transporter transmembrane region; KEGG: rhi:NGR_c28180 ABC transporter ATP-binding protein, ATPase; SMART: ATPase AAA YP_003756573.1 KEGG: mes:Meso_3190 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003756574.1 PFAM: protein of unknown function DUF1465; KEGG: avi:Avi_3663 hypothetical protein YP_003756575.1 PFAM: protein of unknown function DUF1192; KEGG: mag:amb2678 hypothetical protein YP_003756577.1 KEGG: rru:Rru_A1056 zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_003756578.1 KEGG: met:M446_2225 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: haloacid dehalogenase YP_003756579.1 KEGG: rpt:Rpal_1371 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003756580.1 KEGG: eat:EAT1b_2885 3-oxoacyl-(acyl-carrier-protein) reductase YP_003756581.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_a00120 transcriptional regulator YP_003756582.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: reh:H16_A0640 NAD-dependent formate dehydrogenase gamma subunit YP_003756583.1 KEGG: azl:AZL_a00160 formate dehydrogenase, beta subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_003756584.1 manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: azl:AZL_a00170 formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_003756585.1 KEGG: azl:AZL_a00180 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003756586.1 KEGG: met:M446_2356 hypothetical protein YP_003756587.1 TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; elongation factor G domain protein; KEGG: rpc:RPC_4119 elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain protein YP_003756588.1 PFAM: aminotransferase class I and II; KEGG: pla:Plav_2300 aspartate aminotransferase YP_003756589.1 KEGG: svi:Svir_24120 ribonuclease D YP_003756590.1 KEGG: cre:CHLREDRAFT_181050 hypothetical protein YP_003756591.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gvi:glr0293 carbonyl reductase YP_003756592.1 KEGG: nha:Nham_3496 hypothetical protein YP_003756593.1 TIGRFAM: excinuclease ABC subunit B; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; KEGG: oca:OCAR_7183 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase YP_003756594.1 KEGG: mno:Mnod_1815 intracellular protease PfpI family; TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein YP_003756595.1 KEGG: tmz:Tmz1t_3431 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase YP_003756596.1 PFAM: phosphoglycerate mutase; KEGG: rso:RSc3377 hypothetical protein YP_003756597.1 KEGG: bid:Bind_2062 hypothetical protein YP_003756598.1 KEGG: rpt:Rpal_4266 hypothetical protein YP_003756599.1 KEGG: apr:Apre_1555 ribosomal protein L15 YP_003756600.1 SMART: beta-lactamase; KEGG: mpo:Mpop_2508 beta-lactamase YP_003756601.1 KEGG: oca:OCAR_7002 hypothetical protein YP_003756603.1 KEGG: mlo:mll2816 two-component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein YP_003756604.1 KEGG: oca:OCAR_7109 flagellar export protein FliJ YP_003756605.1 KEGG: cur:cur_1817 Fe-S oxidoreductase YP_003756606.1 PFAM: protein of unknown function DUF1153; KEGG: azc:AZC_1033 hypothetical protein YP_003756607.1 KEGG: nwi:Nwi_0603 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_003756608.1 KEGG: pla:Plav_2189 phosphatidylethanolamine N-methyltransferase; PFAM: methyltransferase type 11 YP_003756609.1 PFAM: class I peptide chain release factor; KEGG: rce:RC1_1710 peptidyl-tRNA hydrolase domain YP_003756610.1 PFAM: amine oxidase; KEGG: nar:Saro_1673 FAD dependent oxidoreductase YP_003756611.1 KEGG: sgr:SGR_2594 integral membrane ion antiporter YP_003756612.1 KEGG: cre:CHLREDRAFT_142105 phosphoglycolate phosphatase YP_003756613.1 KEGG: ccs:CCNA_03024 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003756614.1 KEGG: azc:AZC_3973 regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003756615.1 KEGG: mes:Meso_2142 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein YP_003756616.1 KEGG: rpe:RPE_1426 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003756617.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: azc:AZC_3979 delta 1-pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003756618.1 PFAM: protein of unknown function DUF1790; KEGG: mno:Mnod_1376 protein of unknown function DUF1790 YP_003756619.1 PFAM: protein of unknown function DUF526; KEGG: ret:RHE_CH03017 hypothetical protein YP_003756621.1 KEGG: rhi:NGR_c22920 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003756622.1 PFAM: protein of unknown function DUF185; KEGG: msl:Msil_1134 protein of unknown function DUF185 YP_003756623.1 PFAM: protein of unknown function DUF152; KEGG: pzu:PHZ_c2860 hypothetical protein YP_003756624.1 KEGG: bov:BOV_1481 lipoprotein YP_003756625.1 PFAM: phosphoribosyltransferase; manually curated; KEGG: pla:Plav_2258 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase YP_003756626.1 KEGG: mpt:Mpe_A3383 hypothetical protein YP_003756627.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bid:Bind_1144 alcohol dehydrogenase YP_003756628.1 KEGG: bmr:BMI_II1131 Fur family transcriptional regulator YP_003756629.1 KEGG: rpe:RPE_1437 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25-like YP_003756630.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: sil:SPO0811 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003756631.1 KEGG: ter:Tery_3321 hypothetical protein YP_003756632.1 KEGG: pla:Plav_2255 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003756633.1 KEGG: met:M446_4514 hypothetical protein YP_003756634.1 KEGG: oca:OCAR_7581 hypothetical protein YP_003756635.1 KEGG: rce:RC1_3548 catalase; PFAM: catalase related subgroup; catalase domain protein YP_003756636.1 PFAM: class II aldolase/adducin family protein; KEGG: pla:Plav_2248 class II aldolase/adducin family protein YP_003756637.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: pla:Plav_2247 eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_003756638.1 KEGG: pfl:PFL_3106 BioH protein YP_003756639.1 KEGG: sen:SACE_1043 hypothetical protein YP_003756640.1 KEGG: mmr:Mmar10_0743 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003756641.1 KEGG: bpd:BURPS668_A2971 FHA domain-containing protein YP_003756642.1 KEGG: bbt:BBta_0647 5'-methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003756643.1 PFAM: cytochrome C1; KEGG: azc:AZC_3499 cytochrome b/c1 precursor YP_003756644.1 PFAM: cytochrome b/b6 domain; KEGG: bid:Bind_0155 cytochrome b/b6 domain-containing protein YP_003756645.1 TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; KEGG: rlg:Rleg_3042 ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain YP_003756646.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: met:M446_6224 tRNA/rRNA methyltransferase (SpoU) YP_003756647.1 KEGG: sil:SPO2852 CzcN domain-containing protein YP_003756648.1 KEGG: pap:PSPA7_1898 ATP-binding/permease fusion ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_003756649.1 KEGG: oan:Oant_1616 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_003756650.1 PFAM: protein of unknown function DUF2235; KEGG: gob:Gobs_1208 protein of unknown function DUF2235 YP_003756651.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bph:Bphy_4808 NADH:flavin oxidoreductase/NADH oxidase YP_003756652.1 KEGG: nwi:Nwi_0278 hypothetical protein YP_003756653.1 PFAM: NUDIX hydrolase; KEGG: rpe:RPE_0942 NUDIX hydrolase YP_003756654.1 KEGG: rce:RC1_3418 hypothetical protein YP_003756655.1 PFAM: polynucleotide adenylyltransferase region; KEGG: rpb:RPB_1196 polynucleotide adenylyltransferase region YP_003756656.1 KEGG: cin:100179124 similar to transmembrane protein 62 YP_003756657.1 PFAM: metallophosphoesterase; KEGG: met:M446_4942 metallophosphoesterase YP_003756658.1 KEGG: oan:Oant_1728 hypothetical protein YP_003756659.1 PFAM: methyltransferase type 11; KEGG: bid:Bind_3050 methyltransferase type 12 YP_003756660.1 KEGG: bja:bsr4834 hypothetical protein YP_003756661.1 KEGG: mbr:MONBRDRAFT_29712 hypothetical protein YP_003756662.1 KEGG: noc:Noc_2920 hypothetical protein YP_003756663.1 KEGG: sme:SM_b21566 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003756664.1 KEGG: bbt:BBta_5284 co-chaperonin GroES; PFAM: chaperonin Cpn10; SMART: chaperonin Cpn10 YP_003756665.1 KEGG: rsq:Rsph17025_4162 hypothetical protein; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_003756666.1 KEGG: bmr:BMI_I565 superoxide dismutase, Fe-Mn family; PFAM: Manganese/iron superoxide dismutase-like YP_003756667.1 KEGG: jan:Jann_0922 cyclic nucleotide-binding domain-containing protein; PFAM: patatin; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003756668.1 PFAM: patatin; KEGG: rpc:RPC_3027 patatin YP_003756669.1 KEGG: kpu:pK2044_01080 hypothetical protein YP_003756670.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: mpo:Mpop_4924 protein of unknown function DUF853 NPT hydrolase YP_003756671.1 KEGG: rru:Rru_A2480 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase YP_003756672.1 PFAM: Cl- channel voltage-gated family protein; KEGG: azc:AZC_1474 chloride channel protein YP_003756673.1 KEGG: aau:AAur_2369 ribonuclease Rne/Rng family protein YP_003756674.1 KEGG: dan:Dana_GF21393 GF21393 gene product from transcript GF21393-RA YP_003756675.1 KEGG: sus:acid_7895 hypothetical protein YP_003756676.1 PFAM: protein of unknown function DUF817; KEGG: mea:Mex_1p5253 hypothetical protein YP_003756677.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: mno:Mnod_4573 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003756678.1 manually curated; PFAM: DEAD/DEAH box helicase domain protein; helicase; KEGG: pla:Plav_2485 DEAD/DEAH box helicase domain-containing protein; SMART: DEAD-like helicase ; helicase domain protein YP_003756679.1 KEGG: ddr:Deide_22680 hypothetical protein YP_003756680.1 KEGG: rpt:Rpal_4151 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003756681.1 KEGG: bid:Bind_2062 hypothetical protein YP_003756682.1 PFAM: protein of unknown function DUF1520; KEGG: nha:Nham_2714 hypothetical protein YP_003756683.1 KEGG: cre:CHLREDRAFT_174693 hypothetical protein YP_003756684.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: pph:Ppha_1468 protein of unknown function DUF900 hydrolase family protein YP_003756685.1 KEGG: bbt:BBta_3019 arginine/ornithine transporter ATPase; TIGRFAM: LAO/AO transporter ATPase; PFAM: ArgK protein YP_003756686.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: xau:Xaut_2489 peptidase C15 pyroglutamyl peptidase I YP_003756687.1 KEGG: nha:Nham_2646 nitrous oxidase accessory protein YP_003756688.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase; HRDC domain protein; KEGG: tgr:Tgr7_1931 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_003756689.1 KEGG: met:M446_4527 type IV pilus assembly PilZ YP_003756690.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bja:blr7525 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003756691.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: pla:Plav_0599 ATP phosphoribosyltransferase regulatory subunit YP_003756692.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: bra:BRADO6038 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003756693.1 KEGG: rpb:RPB_2707 hypothetical protein YP_003756694.1 KEGG: cak:Caul_2743 cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_003756695.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpb:RPB_3282 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003756696.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_1761 hypothetical protein YP_003756697.1 PFAM: FAD linked oxidase; KEGG: mno:Mnod_0677 FAD linked oxidase YP_003756698.1 KEGG: mno:Mnod_4582 FAD linked oxidase domain protein; PFAM: FAD linked oxidase YP_003756699.1 TIGRFAM: glutamate/cysteine ligase; KEGG: pla:Plav_0658 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase YP_003756700.1 PFAM: protein of unknown function DUF558; KEGG: msl:Msil_2902 protein of unknown function DUF558 YP_003756701.1 KEGG: pla:Plav_0653 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_003756702.1 KEGG: xau:Xaut_1484 hypothetical protein YP_003756703.1 PFAM: protein of unknown function DUF442; KEGG: met:M446_2662 protein tyrosine/serine phosphatase YP_003756704.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; protein of unknown function DUF374; KEGG: bra:BRADO6096 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) YP_003756705.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: mrd:Mrad2831_0888 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003756706.1 PFAM: protein of unknown function DUF2093; KEGG: mes:Meso_0440 hypothetical protein YP_003756707.1 TIGRFAM: exodeoxyribonuclease VII large subunit; KEGG: pla:Plav_0620 exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003756708.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: rpe:RPE_4612 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain YP_003756709.1 PFAM: patatin; KEGG: mlo:mlr8257 hypothetical protein YP_003756710.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mrd:Mrad2831_0072 CMP/dCMP deaminase zinc-binding YP_003756711.1 KEGG: rpt:Rpal_1356 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_003756712.1 KEGG: bra:BRADO6080 methyltransferase; TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase YP_003756713.1 KEGG: oan:Oant_2228 hypothetical protein YP_003756714.1 PFAM: protein of unknown function DUF2239; KEGG: rso:RS03158 hypothetical protein YP_003756715.1 KEGG: xom:XOO_3698 glucose-galactose transporter; TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1 YP_003756716.1 KEGG: oan:Oant_3625 hypothetical protein YP_003756717.1 KEGG: atc:AGR_C_5028 bacterioferritin (BFR); TIGRFAM: bacterioferritin; PFAM: ferritin YP_003756718.1 KEGG: pla:Plav_0293 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003756719.1 KEGG: pla:Plav_0292 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_003756720.1 KEGG: azc:AZC_4243 hypothetical protein; PFAM: peptidase M16 domain protein YP_003756721.1 PFAM: peptidase M16 domain protein; KEGG: azc:AZC_4242 protease precursor YP_003756722.1 KEGG: pzu:PHZ_c3163 hypothetical protein YP_003756723.1 KEGG: pla:Plav_0288 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003756724.1 KEGG: msl:Msil_2860 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003756725.1 KEGG: dpo:Dpse_GA28430 GA28430 gene product from transcript GA28430-RA YP_003756726.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; KEGG: rpe:RPE_1410 riboflavin biosynthesis protein RibF; SMART: riboflavin kinase YP_003756727.1 PFAM: MaoC domain protein dehydratase; KEGG: mag:amb0831 acyl dehydratase YP_003756728.1 PFAM: protein of unknown function DUF1013; KEGG: pla:Plav_2090 hypothetical protein YP_003756729.1 PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; KEGG: mno:Mnod_1556 sulfate transporter YP_003756730.1 PFAM: hypothetical protein; KEGG: mes:Meso_3386 XRE family transcriptional regulator YP_003756731.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mlr7293 acyl-CoA synthetase YP_003756732.1 KEGG: ppd:Ppro_1279 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003756733.1 KEGG: mdi:METDI3470 regulatory protein (nitrile hydratase activator like), GTPase, cobalamin biosynthesis protein (CobW homolog); PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein YP_003756734.1 PFAM: catalase related subgroup; KEGG: bja:blr6251 hypothetical protein YP_003756735.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mes:Meso_2192 activator of HSP90 ATPase-like protein YP_003756736.1 KEGG: oca:OCAR_5411 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003756737.1 PFAM: protein of unknown function DUF465; KEGG: atu:Atu3752 hypothetical protein YP_003756738.1 PFAM: protein of unknown function DUF465; KEGG: pla:Plav_2080 hypothetical protein YP_003756739.1 SMART: beta-lactamase; KEGG: acr:Acry_1612 exonuclease of the beta-lactamase fold involved in RNA processing-like protein YP_003756740.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: mea:Mex_1p3448 ATP-dependent DNA ligase YP_003756741.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: pla:Plav_2072 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003756742.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: azc:AZC_2414 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003756743.1 KEGG: rpb:RPB_1445 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003756744.1 KEGG: rce:RC1_1069 hypothetical protein YP_003756745.1 KEGG: bba:Bd3070 hypothetical protein YP_003756746.1 KEGG: rpb:RPB_1437 NAD(P) transhydrogenase, beta subunit; PFAM: NAD(P) transhydrogenase subunit beta YP_003756747.1 KEGG: atc:AGR_L_2917 hypothetical protein YP_003756748.1 KEGG: rle:RL4135 transmembrane NAD(P) transhydrogenase subunit alpha part 2 YP_003756749.1 KEGG: azc:AZC_0430 NAD(P)(+) transhydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003756750.1 PFAM: aa3 type cytochrome C oxidase subunit IV; KEGG: bra:BRADO1195 hypothetical protein YP_003756751.1 PFAM: K potassium transporter; KEGG: nwi:Nwi_1238 K+ potassium transporter YP_003756752.1 KEGG: mes:Meso_2730 PepF/M3 family oligoendopeptidase; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F YP_003756753.1 KEGG: pla:Plav_2050 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003756754.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_0439 hypothetical protein YP_003756755.1 PFAM: protein of unknown function DUF882; KEGG: mlo:mll2999 hypothetical protein YP_003756756.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oca:OCAR_4501 hydrogen peroxide-inducible genes activator YP_003756757.1 PFAM: protein of unknown function DUF2312; KEGG: rlt:Rleg2_3293 hypothetical protein YP_003756758.1 PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein YP_003756759.1 KEGG: oca:OCAR_7443 hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_003756760.1 PFAM: protein of unknown function DUF1036; KEGG: mno:Mnod_5963 protein of unknown function DUF1036 YP_003756761.1 TIGRFAM: pyruvate kinase; KEGG: smd:Smed_2676 pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_003756762.1 KEGG: nwi:Nwi_0984 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003756763.1 KEGG: nwi:Nwi_0983 50S ribosomal protein L36; manually curated; TIGRFAM: ribosomal protein L36 YP_003756764.1 manually curated; PFAM: response regulator receiver; KEGG: mes:Meso_2750 response regulator receiver protein; SMART: response regulator receiver YP_003756765.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mes:Meso_2749 N-formylglutamate amidohydrolase YP_003756766.1 KEGG: mno:Mnod_1726 histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase YP_003756767.1 PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_1727 alpha/beta hydrolase fold protein YP_003756768.1 PFAM: heat shock protein Hsp20; KEGG: azc:AZC_4265 heat shock protein YP_003756769.1 KEGG: bid:Bind_3031 glutamate synthase (ferredoxin); PFAM: glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamine amidotransferase class-II YP_003756770.1 KEGG: bbt:BBta_1370 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003756771.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cti:RALTA_B0369 transmembrane protein YP_003756772.1 PFAM: protein of unknown function DUF459; KEGG: msl:Msil_3880 protein of unknown function DUF459 YP_003756773.1 KEGG: rpe:RPE_2047 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein YP_003756774.1 KEGG: xau:Xaut_0389 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003756775.1 PFAM: protein of unknown function DUF2320; KEGG: rpa:RPA0880 hypothetical protein YP_003756776.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: oan:Oant_4269 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_003756777.1 TIGRFAM: ferrochelatase; KEGG: mch:Mchl_1748 ferrochelatase; PFAM: ferrochelatase YP_003756778.1 KEGG: csa:Csal_2889 hypothetical protein; PFAM: CHAD domain containing protein; SMART: CHAD domain containing protein YP_003756779.1 KEGG: smd:Smed_4170 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003756780.1 PFAM: thiazole biosynthesis protein; KEGG: rpd:RPD_3430 thiazole synthase YP_003756781.1 KEGG: rde:RD1_0748 thiamine biosynthesis protein ThiS, TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003756782.1 KEGG: bja:bll2324 acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003756783.1 PFAM: FAD dependent oxidoreductase; KEGG: nwi:Nwi_2464 FAD dependent oxidoreductase YP_003756784.1 KEGG: bpt:Bpet0836 hypothetical protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003756785.1 PFAM: cupin; KEGG: rpc:RPC_2157 cupin 2, barrel YP_003756786.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3215 ErfK/YbiS/YcfS/YnhG family protein YP_003756787.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: cak:Caul_2751 lipoyl synthase; PFAM: radical SAM domain protein YP_003756788.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: bja:blr3167 hydroxypyruvate isomerase protein; PFAM: Xylose isomerase domain protein TIM barrel YP_003756789.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nmu:Nmul_A1739 transcriptional regulator CysB-like protein YP_003756790.1 TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter; KEGG: tmz:Tmz1t_0622 sulfate ABC transporter ATPase subunit; SMART: ATPase AAA YP_003756791.1 KEGG: tmz:Tmz1t_0623 sulfate ABC transporter inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter inner membrane subunit CysW; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003756792.1 KEGG: azo:azo1335 sulfate transporter permease; TIGRFAM: sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003756793.1 KEGG: nwi:Nwi_0662 XRE family transcriptional regulator; PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; SMART: hypothetical protein YP_003756794.1 KEGG: oca:OCAR_4436 hypothetical protein YP_003756795.1 KEGG: azo:azo2398 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1234 YP_003756796.1 KEGG: azo:azo2363 periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003756797.1 KEGG: hch:HCH_00655 hypothetical protein YP_003756798.1 PFAM: protein of unknown function DUF214; KEGG: rde:RD1_1737 peptide ABC transporter permease YP_003756799.1 KEGG: pen:PSEEN0581 ABC transporter ATP binding component; PFAM: ABC transporter; SMART: ATPase AAA YP_003756800.1 KEGG: rde:RD1_1739 hypothetical protein YP_003756801.1 KEGG: rpb:RPB_4191 hypothetical protein YP_003756802.1 KEGG: mpo:Mpop_0172 signal transduction histidine kinase; PFAM: HWE histidine kinase; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_003756803.1 PFAM: protein of unknown function DUF1328; KEGG: msl:Msil_0245 protein of unknown function DUF1328 YP_003756804.1 KEGG: rpe:RPE_1751 two-component response regulator; PFAM: response regulator receiver; Sigma-70 region 4 type 2; SMART: response regulator receiver YP_003756805.1 KEGG: bid:Bind_3241 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003756806.1 KEGG: msl:Msil_0285 hypothetical protein YP_003756807.1 KEGG: rpe:RPE_2218 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase YP_003756808.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: bbt:BBta_3152 precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003756809.1 KEGG: rsh:Rsph17029_1474 precorrin methylase YP_003756810.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: met:M446_2444 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003756811.1 TIGRFAM: precorrin-6x reductase; KEGG: rpc:RPC_1885 cobalt-precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_003756812.1 KEGG: bid:Bind_3511 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003756813.1 KEGG: gbe:GbCGDNIH1_0661 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003756814.1 KEGG: mno:Mnod_2151 precorrin-8X methylmutase CbiC/CobH; PFAM: precorrin-8X methylmutase CbiC/CobH YP_003756815.1 KEGG: bid:Bind_3508 precorrin-3B synthase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003756816.1 TIGRFAM: cobalt chelatase subunit CobN; KEGG: rpc:RPC_1889 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase YP_003756817.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bra:BRADO4908 cobalamin synthesis protein CobW; SMART: cobalamin synthesis CobW domain protein YP_003756818.1 KEGG: met:M446_2430 adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis protein YP_003756819.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: mno:Mnod_2143 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_003756820.1 KEGG: mno:Mnod_2141 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase YP_003756821.1 KEGG: mch:Mchl_5724 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003756822.1 KEGG: met:M446_3750 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; cob(II)yrinic acid a,c-diamide reductase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; nitroreductase YP_003756823.1 KEGG: ana:all0384 hypothetical protein; PFAM: Rhodanese domain protein; SMART: rhodanese YP_003756824.1 PFAM: acyltransferase 3; KEGG: swi:Swit_4615 acyltransferase 3 YP_003756825.1 PFAM: protein of unknown function DUF329; KEGG: xau:Xaut_2724 hypothetical protein YP_003756826.1 KEGG: rpt:Rpal_5018 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003756827.1 KEGG: Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003756828.1 KEGG: mbt:JTY_1638 membrane-anchored adenylyl cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003756829.1 PFAM: conserved hypothetical protein; KEGG: azc:AZC_3148 hypothetical protein YP_003756830.1 TIGRFAM: histidinol dehydrogenase; KEGG: mes:Meso_0190 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003756831.1 manually curated; KEGG: mno:Mnod_4928 hypothetical protein YP_003756832.1 KEGG: azc:AZC_3151 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003756833.1 PFAM: patatin; KEGG: aeh:Mlg_1761 patatin YP_003756834.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: mrd:Mrad2831_5457 magnesium transporter; SMART: CBS domain containing protein YP_003756835.1 KEGG: msl:Msil_2464 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003756836.1 KEGG: msl:Msil_2463 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003756837.1 TIGRFAM: GTP cyclohydrolase I; KEGG: oca:OCAR_4254 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003756838.1 KEGG: azc:AZC_0796 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003756839.1 KEGG: cpi:Cpin_7250 KWG Leptospira repeat protein YP_003756840.1 KEGG: avi:Avi_0541 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003756841.1 KEGG: mes:Meso_0394 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003756842.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: met:M446_0034 NAD-dependent epimerase/dehydratase YP_003756843.1 KEGG: slo:Shew_1492 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003756844.1 SMART: Toprim sub domain protein; manually curated; TIGRFAM: recombination protein RecR; KEGG: bhe:BH02300 recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR YP_003756845.1 PFAM: conserved hypothetical protein; KEGG: azc:AZC_0144 hypothetical protein YP_003756846.1 TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA; KEGG: mno:Mnod_4752 DNA polymerase III subunits gamma and tau; SMART: ATPase AAA YP_003756847.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr6518 3-ketoacyl-(acyl-carrier-protein) reductase YP_003756848.1 KEGG: bja:bll1421 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_003756849.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: azc:AZC_0137 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003756850.1 PFAM: cytochrome C class I; KEGG: azc:AZC_0136 cytochrome c YP_003756851.1 PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_0249 extracellular solute-binding protein YP_003756852.1 PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_0248 extracellular solute-binding protein YP_003756853.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rpb:RPB_1772 binding-protein-dependent transport systems inner membrane component YP_003756854.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mno:Mnod_4147 binding-protein-dependent transport systems inner membrane component YP_003756855.1 KEGG: rlg:Rleg_4449 ABC transporter; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003756856.1 PFAM: OmpA/MotB domain protein; KEGG: met:M446_0695 OmpA/MotB domain-containing protein YP_003756857.1 PFAM: saccharopine dehydrogenase; KEGG: mpo:Mpop_5049 saccharopine dehydrogenase YP_003756858.1 KEGG: rlg:Rleg_6820 nuclease (SNase domain protein); PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein) YP_003756859.1 PFAM: pentapeptide repeat protein; KEGG: gbe:GbCGDNIH1_1873 pentapeptide repeat-containing protein YP_003756860.1 PFAM: AsmA family protein; KEGG: pla:Plav_0552 AsmA family protein YP_003756861.1 PFAM: S-adenosylmethionine decarboxylase related; KEGG: pla:Plav_0582 S-adenosylmethionine decarboxylase related YP_003756862.1 PFAM: Domain of unknown function DUF1801; KEGG: mes:Meso_0627 hypothetical protein YP_003756863.1 KEGG: nwi:Nwi_2148 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003756864.1 KEGG: mpo:Mpop_2031 coenzyme A transferase; PFAM: coenzyme A transferase; SMART: coenzyme A transferase YP_003756865.1 PFAM: cytochrome C class I; KEGG: bmr:BMI_II348 cytochrome c family protein YP_003756866.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF971; protein of unknown function DUF59; KEGG: mlo:mlr5402 ATP/GTP-binding-like protein YP_003756867.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mlo:mlr0547 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003756868.1 KEGG: avi:Avi_2069 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region YP_003756869.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis protein; radical SAM domain protein; KEGG: avi:Avi_2072 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003756870.1 KEGG: rpc:RPC_4869 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003756871.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: xau:Xaut_0023 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003756872.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: azc:AZC_4611 cell division ATP-binding protein; SMART: ATPase AAA YP_003756873.1 KEGG: rpe:RPE_4831 hypothetical protein YP_003756874.1 PFAM: protein of unknown function DUF218; KEGG: azc:AZC_4613 hypothetical protein YP_003756875.1 KEGG: rpb:RPB_0837 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003756876.1 PFAM: small multidrug resistance protein; KEGG: gau:GAU_0989 quaternary ammonium compound-resistance protein YP_003756877.1 KEGG: dsh:Dshi_2949 vitamin B12-dependent ribonucleotide reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein YP_003756878.1 KEGG: met:M446_0951 hypothetical protein YP_003756879.1 KEGG: pla:Plav_1584 prephenate dehydrogenase; PFAM: prephenate dehydrogenase YP_003756880.1 KEGG: met:M446_5257 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003756881.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: mlo:mlr3538 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003756882.1 KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein YP_003756883.1 PFAM: methyltransferase type 11; KEGG: bid:Bind_0431 methyltransferase type 11 YP_003756884.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: rhi:NGR_c27100 glyoxalase II; SMART: beta-lactamase YP_003756885.1 PFAM: protein of unknown function DUF985; KEGG: mrd:Mrad2831_5124 hypothetical protein YP_003756886.1 PFAM: protein of unknown function DUF88; KEGG: dvm:DvMF_3051 protein of unknown function DUF88 YP_003756887.1 KEGG: rhi:NGR_c32710 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003756888.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: nwi:Nwi_3060 acetyl-CoA acetyltransferase YP_003756889.1 KEGG: bid:Bind_0428 polyhydroxyalkonate synthesis repressor, PhaR; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_003756890.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: pla:Plav_1571 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003756891.1 KEGG: ret:RHE_CH04016 hypothetical protein YP_003756892.1 KEGG: mmr:Mmar10_1411 50S ribosomal protein L32P; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003756893.1 KEGG: met:M446_6644 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_003756894.1 PFAM: polyprenyl synthetase; KEGG: mch:Mchl_2752 polyprenyl synthetase YP_003756895.1 KEGG: rpb:RPB_2145 outer membrane protein; manually curated; PFAM: porin YP_003756896.1 PFAM: flavin-containing monooxygenase FMO; KEGG: cyt:cce_3763 flavin-binding family monooxygenase YP_003756897.1 KEGG: nha:Nham_0620 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_003756898.1 PFAM: ABC transporter; KEGG: bov:BOV_A1029 zinc ABC transporter permease YP_003756899.1 KEGG: bmi:BMEA_B1117 zinc import ATP-binding protein ZnuC; PFAM: ABC transporter; SMART: ATPase AAA YP_003756900.1 KEGG: azc:AZC_4579 Fe2+/Zn2+ uptake regulation protein YP_003756901.1 KEGG: bra:BRADO0812 hypothetical protein YP_003756902.1 KEGG: xau:Xaut_4106 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate hydrolase YP_003756904.1 KEGG: oca:OCAR_7059 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003756905.1 KEGG: azc:AZC_1459 hypothetical protein YP_003756906.1 PFAM: protein of unknown function DUF583; KEGG: rsk:RSKD131_1297 hypothetical protein YP_003756907.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_2818 LysR family transcriptional regulator YP_003756908.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_0487 short chain dehydrogenase YP_003756909.1 KEGG: mpo:Mpop_0777 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: glycine cleavage system P-protein-like YP_003756910.1 KEGG: ara:Arad_2526 glycine cleavage system protein H; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage system protein H YP_003756911.1 KEGG: azc:AZC_4245 glycine cleavage system T protein; TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003756912.1 KEGG: nwi:Nwi_2161 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003756913.1 KEGG: atc:AGR_C_4545 heme oxygenase; manually curated; PFAM: Haem oxygenase-like YP_003756914.1 KEGG: rlt:Rleg2_0221 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003756915.1 KEGG: mno:Mnod_6193 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003756916.1 KEGG: mno:Mnod_6194 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003756917.1 KEGG: alv:Alvin_0024 membrane protein-like protein YP_003756918.1 KEGG: mpt:Mpe_A3147 signal peptide protein YP_003756919.1 KEGG: avn:Avin_11580 acetyltransferase (GNAT) family YP_003756920.1 KEGG: tkm:TK90_2534 hypothetical protein YP_003756921.1 PFAM: isochorismatase hydrolase; KEGG: bac:BamMC406_1819 isochorismatase hydrolase YP_003756922.1 KEGG: mei:Msip34_0694 phosphate-selective porin O and P YP_003756923.1 PFAM: HupE/UreJ protein; KEGG: rlg:Rleg_6126 HupE/UreJ protein YP_003756924.1 PFAM: urease accessory protein UreD; KEGG: mex:Mext_1199 urease accessory protein UreD YP_003756925.1 KEGG: bbt:BBta_4441 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_003756926.1 TIGRFAM: urease subunit alpha; KEGG: mex:Mext_1197 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein YP_003756927.1 TIGRFAM: urease subunit gamma; urease, beta subunit; KEGG: bbt:BBta_1961 bifunctional urease subunit gamma/beta; PFAM: Urease subunit gamma region; Urease subunit beta YP_003756928.1 PFAM: urease accessory protein UreF; KEGG: bbt:BBta_1960 urease accessory protein UreF YP_003756929.1 PFAM: urease accessory protein UreE; KEGG: bbt:BBta_1959 urease accessory protein UreE YP_003756930.1 TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: rle:pRL120441 ABC transporter component; SMART: ATPase AAA YP_003756931.1 TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: atc:AGR_pAT_797 probable ATP-binding component of ABC transporter; SMART: ATPase AAA YP_003756932.1 KEGG: atc:AGR_pAT_795 ABC transporter (permease); TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator YP_003756933.1 PFAM: inner-membrane translocator; KEGG: rle:pRL120444 permease of ABC transporter YP_003756934.1 KEGG: atc:AGR_pAT_792 hypothetical protein YP_003756935.1 PFAM: ANTAR domain protein; KEGG: bra:BRADO5875 response regulator YP_003756936.1 PFAM: extracellular ligand-binding receptor; KEGG: bra:BRADO5876 aliphatic amidase expression-regulating protein (AmiC) YP_003756937.1 KEGG: azl:AZL_a02790 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003756938.1 KEGG: sal:Sala_0801 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein YP_003756939.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: swi:Swit_3713 RND family efflux transporter MFP subunit YP_003756940.1 KEGG: swi:Swit_3712 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003756941.1 KEGG: dac:Daci_2708 hypothetical protein YP_003756943.1 KEGG: tgo:TGME49_004510 hypothetical protein YP_003756944.1 PFAM: ferric reductase domain protein transmembrane component domain; oxidoreductase FAD-binding domain protein; KEGG: dia:Dtpsy_0748 ferric reductase domain protein transmembrane component YP_003756945.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mag:amb0880 dehydrogenase YP_003756946.1 KEGG: mpt:Mpe_A2975 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074 YP_003756947.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: rlt:Rleg2_0711 bifunctional deaminase-reductase domain protein YP_003756948.1 KEGG: mtp:Mthe_0454 diaminopimelate epimerase YP_003756949.1 KEGG: vap:Vapar_3221 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003756950.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: bcj:BCAM2169 outer membrane autotransporter; SMART: Autotransporter beta- domain protein YP_003756951.1 KEGG: nha:Nham_3292 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003756953.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: rpf:Rpic12D_0067 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003756954.1 KEGG: cqu:CpipJ_CPIJ005630 hypothetical protein YP_003756955.1 KEGG: sme:SMc01756 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003756956.1 SMART: 3'-5' exonuclease; TIGRFAM: ribonuclease D; KEGG: xau:Xaut_3138 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_003756957.1 KEGG: pzu:PHZ_p0115 heat shock protein DnaJ, N-terminal; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003756958.1 PFAM: Ppx/GppA phosphatase; KEGG: azc:AZC_3665 Ppx/GppA phosphatase YP_003756959.1 KEGG: bid:Bind_1568 polyphosphate kinase; PFAM: polyphosphate kinase YP_003756960.1 KEGG: rsq:Rsph17025_0399 chromosomal replication initiator, DnaA YP_003756961.1 PFAM: protein of unknown function UPF0118; KEGG: rec:RHECIAT_CH0001557 permease YP_003756962.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bra:BRADO3343 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase) YP_003756963.1 KEGG: pla:Plav_3330 hypothetical protein YP_003756964.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: mno:Mnod_5547 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003756965.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; KEGG: rpe:RPE_0851 pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003756966.1 KEGG: pcb:PC000826.00.0 hypothetical protein YP_003756967.1 PFAM: glycosyl transferase group 1; KEGG: bid:Bind_0114 glycosyl transferase group 1 YP_003756968.1 KEGG: mpo:Mpop_2023 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase YP_003756969.1 PFAM: cytochrome P450; KEGG: chl:Chy400_1647 cytochrome P450 YP_003756971.1 PFAM: DinB family protein; KEGG: acr:Acry_1562 DinB family protein YP_003756972.1 PFAM: nucleoside diphosphate kinase; KEGG: pzu:PHZ_c1820 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003756973.1 KEGG: bcm:Bcenmc03_3418 hypothetical protein YP_003756974.1 KEGG: tbd:Tbd_0892 hypothetical protein YP_003756975.1 KEGG: pla:Plav_3334 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003756976.1 KEGG: dwi:Dwil_GK12723 GK12723 gene product from transcript GK12723-RA YP_003756977.1 KEGG: nha:Nham_1796 chromate transporter; TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_003756978.1 TIGRFAM: glycyl-tRNA synthetase subunit beta; KEGG: mch:Mchl_3416 glycyl-tRNA synthetase subunit beta YP_003756979.1 KEGG: mmu:100039562 predicted gene 2312 YP_003756980.1 TIGRFAM: glycyl-tRNA synthetase subunit alpha; KEGG: bra:BRADO2029 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha YP_003756981.1 KEGG: sbi:SORBI_07g003550 hypothetical protein YP_003756982.1 PFAM: peptidase S49; KEGG: bbt:BBta_2353 serine protease SohB YP_003756983.1 PFAM: methyltransferase small; KEGG: mch:Mchl_3425 methyltransferase small YP_003756984.1 PFAM: protein of unknown function DUF2007; KEGG: rhi:NGR_c04590 hypothetical protein YP_003756985.1 PFAM: polyprenyl synthetase; KEGG: bid:Bind_0855 polyprenyl synthetase YP_003756986.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: rpe:RPE_4419 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003756987.1 KEGG: nwi:Nwi_2594 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_003756988.1 KEGG: pla:Plav_0719 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003756989.1 KEGG: azl:AZL_e02140 DNA polymerase bacteriophage-type; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily YP_003756990.1 KEGG: dvm:DvMF_1576 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; SMART: transcription activator effector binding YP_003756991.1 TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain; KEGG: mno:Mnod_6073 molybdenum cofactor biosynthesis protein B; SMART: molybdopterin binding domain YP_003756992.1 PFAM: glycosyl transferase family 2; KEGG: pla:Plav_0708 glycosyl transferase YP_003756993.1 KEGG: bmt:BSUIS_A0415 radical SAM domain-containing protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003756994.1 KEGG: swi:Swit_4574 ribonuclease H; PFAM: ribonuclease HII/HIII YP_003756995.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pzu:PHZ_c0577 modification methylase YP_003756996.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; helix-hairpin-helix motif; KEGG: rce:RC1_0510 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; DNA-binding protein; iron-sulfur cluster loop YP_003756997.1 PFAM: protein of unknown function DUF721; KEGG: bbt:BBta_2320 hypothetical protein YP_003756998.1 PFAM: DSBA oxidoreductase; KEGG: msl:Msil_1603 DsbA oxidoreductase YP_003756999.1 KEGG: rhi:NGR_c05580 disulfide bond formation protein D YP_003757000.1 KEGG: bmr:BMI_I499 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003757001.1 KEGG: rhi:NGR_c03620 hypothetical protein YP_003757002.1 KEGG: mlo:mlr7410 FoF1 ATP synthase, subunit I YP_003757003.1 KEGG: apb:SAR116_1101 H+-transporting two-sector ATPase, subunit alpha; TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha YP_003757004.1 KEGG: pub:SAR11_0117 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003757005.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: azc:AZC_4262 ATP synthase subunit B precursor YP_003757006.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bov:BOV_0397 F0F1 ATP synthase subunit B YP_003757007.1 KEGG: avi:Avi_1078 hypothetical protein YP_003757008.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: oca:OCAR_7331 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_003757009.1 TIGRFAM: homoserine kinase; KEGG: rce:RC1_3648 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_003757010.1 KEGG: smd:Smed_0529 ribonuclease H; PFAM: ribonuclease H YP_003757011.1 PFAM: redoxin; KEGG: mno:Mnod_6935 redoxin domain protein YP_003757012.1 KEGG: mno:Mnod_6934 hypothetical protein YP_003757013.1 PFAM: protein of unknown function DUF179; KEGG: oca:OCAR_7326 hypothetical protein YP_003757014.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: msl:Msil_1254 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003757015.1 KEGG: azc:AZC_2241 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003757016.1 KEGG: azc:AZC_2240 mitochondrial processing peptidase-like protein; PFAM: peptidase M16 domain protein YP_003757017.1 TIGRFAM: threonine synthase; KEGG: xau:Xaut_3524 threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003757018.1 PFAM: Surfeit locus 1 family protein; KEGG: met:M446_2342 surfeit locus 1 family protein YP_003757019.1 PFAM: protein of unknown function DUF983; KEGG: bra:BRADO6700 hypothetical protein YP_003757020.1 PFAM: cytochrome C oxidase subunit III; KEGG: pla:Plav_0673 cytochrome C oxidase subunit III YP_003757021.1 PFAM: cytochrome C oxidase assembly protein CtaG/Cox11; KEGG: oan:Oant_0585 cytochrome C oxidase assembly protein YP_003757022.1 KEGG: bid:Bind_0727 protein CoxF YP_003757023.1 KEGG: pla:Plav_0671 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003757024.1 KEGG: azc:AZC_2959 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003757025.1 KEGG: rpd:RPD_0814 cytochrome-c oxidase; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_003757026.1 PFAM: invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein YP_003757027.1 KEGG: ppg:PputGB1_2895 catalase domain-containing protein YP_003757028.1 KEGG: nha:Nham_2600 hypothetical protein YP_003757029.1 KEGG: oaa:100075777 similar to WW domain-containing adapter protein with coiled-coil YP_003757030.1 PFAM: regulatory protein TetR; KEGG: met:M446_0429 TetR family transcriptional regulator YP_003757031.1 KEGG: met:M446_0428 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003757032.1 PFAM: acriflavin resistance protein; KEGG: met:M446_0427 acriflavin resistance protein YP_003757033.1 PFAM: protein of unknown function DUF533; KEGG: msl:Msil_0620 protein of unknown function DUF533 YP_003757034.1 PFAM: secretion protein HlyD; KEGG: bbt:BBta_7064 hypothetical protein YP_003757035.1 KEGG: bbt:BBta_7063 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003757036.1 PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_7062 ABC transporter permease YP_003757037.1 PFAM: protein of unknown function DUF2147; KEGG: xau:Xaut_1034 hypothetical protein YP_003757038.1 manually curated; KEGG: azc:AZC_1648 esterase YP_003757039.1 KEGG: mvn:Mevan_1402 methyl-accepting chemotaxis sensory transducer YP_003757040.1 KEGG: mes:Meso_3941 hypothetical protein YP_003757041.1 KEGG: rer:RER_07200 hypothetical protein YP_003757042.1 KEGG: sal:Sala_0171 para-aminobenzoate synthase, component I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding-like; aminotransferase class IV YP_003757043.1 PFAM: monooxygenase FAD-binding; KEGG: nwi:Nwi_2327 hypothetical protein YP_003757044.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: gox:GOX0315 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003757045.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mlo:mlr9579 magnesium and cobalt transporter YP_003757047.1 TIGRFAM: potassium-transporting ATPase subunit alpha; KEGG: smd:Smed_5358 potassium-transporting ATPase A; PFAM: K transporting ATPase subunit alpha YP_003757048.1 KEGG: sme:SMa2331 potassium-transporting ATPase B; TIGRFAM: K+-transporting ATPase subunit beta; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase YP_003757049.1 TIGRFAM: potassium ABC transporter ATPase; KEGG: oca:OCAR_4177 K+-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit YP_003757050.1 KEGG: sme:SMa2327 sensor protein; PFAM: osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_003757051.1 KEGG: smd:Smed_5362 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein YP_003757052.1 KEGG: oan:Oant_4139 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003757053.1 KEGG: rpa:RPA1393 hypothetical protein YP_003757054.1 PFAM: protein of unknown function DUF323; KEGG: mno:Mnod_8069 protein of unknown function DUF323 YP_003757055.1 KEGG: gme:Gmet_1199 hypothetical protein YP_003757056.1 PFAM: sulfatase; KEGG: fjo:Fjoh_1142 sulfatase YP_003757057.1 KEGG: app:CAP2UW1_0198 nonspecific acid phosphatase precursor YP_003757058.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: nha:Nham_2980 hypothetical protein YP_003757059.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rme:Rmet_5225 hypothetical protein YP_003757060.1 KEGG: xau:Xaut_3415 hypothetical protein YP_003757061.1 PFAM: secretion protein HlyD; KEGG: nha:Nham_2977 secretion protein HlyD YP_003757062.1 KEGG: mea:Mex_2p1237 hypothetical protein YP_003757063.1 KEGG: mlo:mlr2855 two-component response regulator; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver YP_003757064.1 KEGG: mlo:mlr2856 nitrate transporter component, NrtA YP_003757065.1 PFAM: major facilitator superfamily MFS_1; KEGG: mes:Meso_1450 major facilitator transporter YP_003757067.1 KEGG: ret:RHE_CH01782 nitrite reductase [NAD(P)H], large subunit protein; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003757068.1 KEGG: mlo:mlr2863 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003757069.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rlg:Rleg_1627 molybdopterin oxidoreductase YP_003757070.1 KEGG: bra:BRADO6362 hypothetical protein YP_003757071.1 KEGG: cyh:Cyan8802_3578 hypothetical protein YP_003757072.1 KEGG: pcs:Pc18g03770 Pc18g03770 YP_003757073.1 KEGG: met:M446_0272 methyl-accepting chemotaxis sensory transducer YP_003757074.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; KEGG: xau:Xaut_3175 hypothetical protein YP_003757075.1 KEGG: mag:amb4275 hypothetical protein YP_003757076.1 KEGG: pgu:PGUG_00526 hypothetical protein YP_003757077.1 KEGG: oan:Oant_2297 phage-related tail fibre protein-like protein YP_003757078.1 KEGG: dvu:DVU2153 tail fiber protein YP_003757079.1 KEGG: hvo:HVO_1134 hypothetical protein YP_003757080.1 KEGG: ppr:PBPRB1275 hypothetical protein YP_003757081.1 KEGG: sfu:Sfum_1890 hypothetical protein YP_003757082.1 PFAM: Phage tail tape measure protein, conserved region; KEGG: dvu:DVU2157 tail tape measure protein YP_003757084.1 KEGG: hmu:Hmuk_0465 D12 class N6 adenine-specific DNA methyltransferase YP_003757085.1 KEGG: mpo:Mpop_5468 hypothetical protein YP_003757086.1 KEGG: ppw:PputW619_3937 hypothetical protein YP_003757087.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: ppw:PputW619_3938 HK97 family phage protein YP_003757088.1 KEGG: vap:Vapar_2478 head-tail adaptor protein; TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein YP_003757089.1 KEGG: smd:Smed_1332 phiE125 gp8 hypothetical protein YP_003757090.1 KEGG: zro:ZYRO0G05214g hypothetical protein YP_003757091.1 KEGG: smd:Smed_1328 hypothetical protein YP_003757092.1 KEGG: cfa:484298 SAPS domain family, member 1 YP_003757093.1 KEGG: mpt:Mpe_A0539 hypothetical protein YP_003757094.1 KEGG: rpe:RPE_1908 HK97 family phage major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_003757095.1 KEGG: sit:TM1040_1060 peptidase U35, phage prohead HK97; TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97 YP_003757096.1 KEGG: bmv:BMASAVP1_0977 hypothetical protein YP_003757097.1 KEGG: pno:SNOG_03883 hypothetical protein YP_003757098.1 KEGG: gbm:Gbem_0197 hypothetical protein YP_003757099.1 KEGG: dvl:Dvul_0869 HK97 family phage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_003757100.1 PFAM: terminase; KEGG: bcm:Bcenmc03_1289 terminase YP_003757101.1 KEGG: smd:Smed_1338 P27 family phage terminase small subunit YP_003757102.1 KEGG: pic:PICST_83083 hypothetical protein YP_003757103.1 KEGG: nwi:Nwi_1548 hypothetical protein; manually curated; SMART: HNH nuclease YP_003757104.1 KEGG: pap:PSPA7_2885 transcriptional regulator YP_003757105.1 PFAM: hypothetical protein; KEGG: bpt:Bpet0961 hypothetical protein YP_003757106.1 KEGG: sil:SPOA0436 alpha/beta fold family hydrolase YP_003757107.1 KEGG: cre:CHLREDRAFT_150664 RING hypothetical protein YP_003757108.1 KEGG: afn:Acfer_0837 hypothetical protein YP_003757109.1 KEGG: tca:662157 similar to CG1303-PA YP_003757110.1 KEGG: tcu:Tcur_2837 kinetoplast-associated protein-like protein YP_003757111.1 KEGG: mkm:Mkms_5935 hypothetical protein YP_003757112.1 KEGG: rlt:Rleg2_3568 hypothetical protein YP_003757113.1 KEGG: nmg:Nmag_3240 pyrrolo-quinoline quinone YP_003757114.1 KEGG: kfl:Kfla_3820 hypothetical protein YP_003757115.1 KEGG: afw:Anae109_0602 regulatory protein ArsR YP_003757116.1 KEGG: xcb:XC_2014 hypothetical protein YP_003757117.1 KEGG: xau:Xaut_3623 hypothetical protein YP_003757118.1 KEGG: htu:Htur_3193 RecA-superfamily ATPase implicated in signal transduction-like protein YP_003757120.1 KEGG: bta:785824 hypothetical protein LOC785824 YP_003757121.1 KEGG: sbi:SORBI_02g043560 hypothetical protein YP_003757123.1 KEGG: FHA domain-containing protein YP_003757124.1 PFAM: protein of unknown function DUF2312; KEGG: pzu:PHZ_c3117 hypothetical protein YP_003757125.1 KEGG: prw:PsycPRwf_0036 pseudouridine synthase YP_003757126.1 KEGG: pfs:pQBR0371 helicase; PFAM: SNF2-related protein; SMART: DEAD-like helicase YP_003757127.1 KEGG: mag:amb2052 hypothetical protein YP_003757128.1 KEGG: pfs:pQBR0370 hypothetical protein YP_003757129.1 PFAM: MT-A70 family protein; KEGG: rsh:Rsph17029_0660 MT-A70 family protein YP_003757130.1 KEGG: sgr:SGR_4109 L-aspartate oxidase YP_003757131.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: slt:Slit_1955 C-5 cytosine-specific DNA methylase YP_003757132.1 KEGG: ank:AnaeK_1326 integrase catalytic region YP_003757133.1 KEGG: ptr:737498 transmembrane and ubiquitin-like domain containing 1 YP_003757134.1 KEGG: xau:Xaut_4514 hypothetical protein YP_003757136.1 KEGG: maq:Maqu_0118 hypothetical protein YP_003757137.1 KEGG: sco:SCO1278 ATP/GTP-binding protein YP_003757138.1 KEGG: bbt:BBta_p0172 carbamoyltransferase HypF YP_003757139.1 manually curated; KEGG: mrd:Mrad2831_0002 chromosomal replication initiation protein YP_003757140.1 KEGG: dwi:Dwil_GK10250 GK10250 gene product from transcript GK10250-RA YP_003757142.1 KEGG: sjp:SJA_C1-26300 phage repressor YP_003757143.1 KEGG: mno:Mnod_1018 exonuclease RNase T and DNA polymerase III; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_003757144.1 KEGG: gau:GAU_0855 DNA-directed RNA polymerase beta subunit YP_003757145.1 KEGG: pmo:Pmob_0407 DNA methylase N-4/N-6 domain-containing protein YP_003757146.1 KEGG: fre:Franean1_0635 hypothetical protein YP_003757147.1 PFAM: porin; KEGG: mlo:mll1390 outer membrane protein YP_003757148.1 PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_3864 recombinase YP_003757151.1 KEGG: sma:SAV_4393 integral membrane protein YP_003757152.1 SMART: ATPase AAA; KEGG: nmu:Nmul_D2816 plasmid partition protein ParA-like YP_003757153.1 KEGG: hoh:Hoch_4667 hypothetical protein YP_003757154.1 TIGRFAM: lytic murein transglycosylase; KEGG: bra:BRADO4023 transglycolase YP_003757155.1 KEGG: ppa:PAS_chr4_0618 One of two type I myosins YP_003757156.1 KEGG: rpf:Rpic12D_1070 hypothetical protein YP_003757157.1 KEGG: bpt:Bpet0307 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003757158.1 PFAM: dihydropteroate synthase DHPS; KEGG: xau:Xaut_4100 dihydropteroate synthase DhpS YP_003757159.1 TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: pfo:Pfl01_2061 precorrin 6A synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003757160.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_c04930 transcriptional regulator YP_003757161.1 KEGG: met:M446_2368 flavoprotein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_003757162.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll3247 dioxygenase YP_003757163.1 PFAM: phospholipase/carboxylesterase; KEGG: sru:SRU_2742 phospholipase/carboxylesterase YP_003757164.1 KEGG: mms:mma_2479 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_003757165.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: reh:H16_B0945 pyridine nucleotide-disulphide oxidoreductase YP_003757166.1 PFAM: ferritin; KEGG: rlt:Rleg2_4342 ferritin Dps family protein YP_003757167.1 KEGG: msl:Msil_0130 ceramide glucosyltransferase YP_003757168.1 KEGG: mem:Memar_0248 hypothetical protein YP_003757170.1 KEGG: nwi:Nwi_2991 hypothetical protein YP_003757171.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: pzu:PHZ_c2961 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_003757172.1 KEGG: msl:Msil_0049 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003757173.1 PFAM: type III secretion system inner membrane R protein; KEGG: bid:Bind_3589 flagellar biosynthesis protein FliR YP_003757174.1 KEGG: rlg:Rleg_0379 hypothetical protein YP_003757175.1 PFAM: flagellar protein FlgJ-like; KEGG: bja:bll6849 hypothetical protein YP_003757176.1 KEGG: mes:Meso_0268 hypothetical protein YP_003757177.1 KEGG: mno:Mnod_6732 hypothetical protein YP_003757178.1 KEGG: msl:Msil_0055 hypothetical protein YP_003757179.1 KEGG: msl:Msil_1440 hypothetical protein YP_003757180.1 PFAM: CheD family protein; KEGG: ara:Arad_0855 chemoreceptor glutamine deamidase CheD; stimulates methylation of MCP proteins YP_003757181.1 KEGG: bid:Bind_3627 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003757182.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: pzu:PHZ_c3376 chemotaxis-specific methylesterase; SMART: response regulator receiver YP_003757183.1 PFAM: MCP methyltransferase CheR-type; KEGG: acr:Acry_2710 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type YP_003757184.1 KEGG: msl:Msil_1445 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003757185.1 KEGG: acr:Acry_2708 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_003757186.1 KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003757187.1 KEGG: virus protein YP_003757188.1 KEGG: pzu:PHZ_c3382 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003757189.1 KEGG: mpo:Mpop_0517 hypothetical protein; manually curated; PFAM: type IV pilus assembly PilZ YP_003757190.1 TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; KEGG: mch:Mchl_3001 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003757191.1 PFAM: type IV pilus assembly PilZ; KEGG: swi:Swit_3968 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_003757192.1 SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bra:BRADO3548 hypothetical protein; PFAM: GGDEF domain containing protein YP_003757193.1 KEGG: azc:AZC_0653 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003757194.1 PFAM: flagellar hook capping protein; KEGG: bid:Bind_3552 flagellar basal body rod modification protein YP_003757195.1 PFAM: flagellar FlbT family protein; KEGG: met:M446_6510 flagellar biosynthesis repressor FlbT YP_003757196.1 PFAM: flagellar FlaF family protein; KEGG: mes:Meso_0276 flagellar biosynthesis regulatory protein FlaF YP_003757197.1 PFAM: flagellar hook-associated 3 family protein; KEGG: bid:Bind_3555 flagellar hook-associated protein FlgL YP_003757198.1 KEGG: bja:bll6857 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein YP_003757199.1 KEGG: mlo:mlr2937 flagellar hook protein FlgE; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003757200.1 KEGG: ara:Arad_0907 two-component response regulator protein; PFAM: transcriptional regulator; SMART: transcriptional regulator domain protein YP_003757201.1 PFAM: type IV pilus assembly PilZ; KEGG: swi:Swit_3968 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_003757202.1 SMART: heat shock protein DnaJ domain protein; KEGG: bmb:BruAb1_0098 hypothetical protein YP_003757203.1 KEGG: dda:Dd703_1767 histidine kinase YP_003757204.1 KEGG: ele:Elen_1721 ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YP_003757205.1 PFAM: flagellar hook-length control protein; KEGG: sme:SMc03044 chemotaxis protein (motility protein D) YP_003757206.1 KEGG: azc:AZC_0624 chemotaxis protein MotC YP_003757207.1 PFAM: OmpA/MotB domain protein; KEGG: bja:bll6862 flagellar motor protein MotB YP_003757208.1 KEGG: met:M446_3224 hypothetical protein YP_003757209.1 KEGG: met:M446_3225 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein YP_003757210.1 PFAM: flagellin domain protein; KEGG: rpe:RPE_1165 flagellin YP_003757211.1 KEGG: bja:bll6867 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003757212.1 PFAM: flagellar basal body-associated protein FliL; KEGG: azc:AZC_0629 flagellar basal body-associated protein YP_003757213.1 PFAM: flagellar L-ring protein; KEGG: msl:Msil_0031 flagellar L-ring protein YP_003757214.1 KEGG: bja:bll6870 hypothetical protein YP_003757215.1 PFAM: flagellar P-ring protein; KEGG: bja:bll6871 flagellar basal body P-ring protein YP_003757216.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mes:Meso_0294 flagellar protein FlgA; SMART: SAF domain protein YP_003757217.1 KEGG: rhi:NGR_c02770 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003757218.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: azc:AZC_0635 flagellar hook-basal body protein FliE YP_003757219.1 KEGG: msl:Msil_0025 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003757220.1 PFAM: flagellar basal body rod protein; KEGG: rpc:RPC_1094 flagellar basal body rod protein FlgB YP_003757221.1 KEGG: bmt:BSUIS_B0126 hypothetical protein YP_003757222.1 PFAM: type III secretion exporter; KEGG: met:M446_3217 flagellar biosynthesis protein FlhB YP_003757223.1 PFAM: flagellar motor switch protein FliG; KEGG: msl:Msil_0021 flagellar motor switch protein FliG YP_003757224.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: mch:Mchl_0650 flagellar motor switch protein FliN YP_003757225.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: met:M446_3213 flagellar motor switch protein FliM YP_003757226.1 KEGG: mlo:mll2905 flagellar motor protein MotA YP_003757227.1 KEGG: bid:Bind_2810 flagellar basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; PFAM: flagellar basal body rod protein YP_003757228.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: msl:Msil_1657 flagellum-specific ATP synthase; SMART: ATPase AAA YP_003757229.1 PFAM: glycoside hydrolase family 24; KEGG: ere:EUBREC_2755 phage-related lysozyme YP_003757230.1 KEGG: rce:RC1_0504 hypothetical protein; PFAM: CBS domain containing protein; haloacid dehalogenase; SMART: CBS domain containing protein YP_003757231.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4699 LysR family transcriptional regulator YP_003757232.1 KEGG: gbe:GbCGDNIH1_0177 sarcosine oxidase beta subunit; TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase YP_003757233.1 PFAM: Sarcosine oxidase subunit delta heterotetrameric; KEGG: xau:Xaut_4701 sarcosine oxidase subunit delta heterotetrameric YP_003757234.1 KEGG: azl:AZL_a09570 sarcosine oxidase subunit alpha; TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: glycine cleavage T protein (aminomethyl transferase); HI0933 family protein YP_003757235.1 PFAM: Sarcosine oxidase subunit gamma; KEGG: mdi:METDI2319 sarcosine oxidase subunit gamma YP_003757236.1 KEGG: xau:Xaut_4694 XRE family transcriptional regulator; PFAM: hypothetical protein; Cupin 2 conserved barrel domain protein; SMART: hypothetical protein YP_003757237.1 PFAM: sulfatase; KEGG: rpe:RPE_2198 sulfatase YP_003757238.1 KEGG: mex:Mext_1925 hypothetical protein; PFAM: domain of unknown function DUF1745; FIST C domain; SMART: domain of unknown function DUF1745 YP_003757239.1 KEGG: mlo:mlr1132 two-component sensor; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003757240.1 KEGG: mlo:mll1133 two-component response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003757241.1 KEGG: rno:24826 thyroglobulin YP_003757242.1 KEGG: nha:Nham_1427 hypothetical protein YP_003757243.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: maq:Maqu_1687 NAD-dependent epimerase/dehydratase YP_003757244.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase; helicase-associated domain protein; KEGG: met:M446_6547 ATP-dependent helicase HrpB; SMART: helicase-associated domain protein; helicase; DEAD-like helicase YP_003757245.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: mes:Meso_0005 ribulose-5-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003757246.1 KEGG: bra:BRADO1656 phosphoribulokinase (phosphopentokinase) (PRKase) (PRK); PFAM: phosphoribulokinase/uridine kinase YP_003757247.1 PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: nha:Nham_3754 fructose-1,6-bisphosphatase YP_003757248.1 PFAM: 20S proteasome A and subunit betas; KEGG: mlo:mll0713 hypothetical protein YP_003757249.1 KEGG: pde:Pden_0825 transglutaminase domain-containing protein; PFAM: transglutaminase; transglutaminase domain protein; SMART: transglutaminase YP_003757250.1 PFAM: protein of unknown function DUF403; KEGG: mlo:mll0716 hypothetical protein YP_003757251.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: oan:Oant_3524 hypothetical protein YP_003757252.1 KEGG: rhi:NGR_c23560 formate-tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS YP_003757253.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ote:Oter_3339 glyoxalase/bleomycin resistance protein/dioxygenase YP_003757254.1 KEGG: hhe:HH1626 dihydrodipicolinate synthase YP_003757255.1 KEGG: bja:bll1285 hypothetical protein YP_003757256.1 SMART: protein phosphatase 2C domain protein; KEGG: jan:Jann_4143 protein serine/threonine phosphatases YP_003757257.1 PFAM: Forkhead-associated protein; KEGG: jan:Jann_1605 FHA domain-containing protein YP_003757258.1 KEGG: mxa:MXAN_5591 FHA domain-TPR-repeat-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein YP_003757259.1 KEGG: app:CAP2UW1_3021 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: hypothetical protein YP_003757260.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mes:Meso_4066 cytochrome bd ubiquinol oxidase subunit I YP_003757261.1 KEGG: mes:Meso_4065 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003757262.1 SMART: nuclease (SNase domain protein); KEGG: rde:RD1_A0063 succinoglycan biosynthesis protein ExoI YP_003757263.1 KEGG: cyn:Cyan7425_0683 hypothetical protein YP_003757264.1 PFAM: fatty acid desaturase; KEGG: pla:Plav_3282 fatty acid desaturase YP_003757265.1 KEGG: tbd:Tbd_1270 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003757266.1 KEGG: eli:ELI_00525 phosphoenolpyruvate carboxylase YP_003757267.1 TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rhi:NGR_c26250 succinyl-CoA synthetase subunit alpha; SMART: CoA-binding domain protein YP_003757268.1 TIGRFAM: succinyl-CoA synthetase subunit beta; KEGG: rhi:NGR_c26240 malate-CoA ligase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003757269.1 KEGG: mlo:mlr1323 subunit beta of citrate lyase; PFAM: HpcH/HpaI aldolase YP_003757270.1 PFAM: aminotransferase class V; KEGG: mlo:mlr1322 serine-glyoxylate aminotransferase YP_003757271.1 KEGG: mlo:mlr1320 nitrate/nitrite regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003757272.1 KEGG: bja:bll4177 hypothetical protein YP_003757273.1 PFAM: nuclease (SNase domain protein); KEGG: pla:Plav_1691 nuclease YP_003757274.1 PFAM: transcription factor CarD; KEGG: pla:Plav_1694 CarD family transcriptional regulator YP_003757275.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nha:Nham_0506 4Fe-4S ferredoxin iron-sulfur binding YP_003757276.1 KEGG: azl:AZL_026650 ribosome-associated heat shock protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003757277.1 KEGG: xau:Xaut_2639 helicase domain-containing protein; PFAM: helicase; SMART: helicase YP_003757278.1 KEGG: bja:bll0161 hypothetical protein YP_003757279.1 KEGG: sit:TM1040_0671 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003757280.1 KEGG: rpd:RPD_0285 hypothetical protein YP_003757281.1 SMART: von Willebrand factor A; TIGRFAM: cobalt chelatase subunit CobT; KEGG: met:M446_6497 cobalt chelatase subunit CobT; PFAM: Cobalt chelatase CobT subunit YP_003757282.1 SMART: ATPase AAA; TIGRFAM: cobalt chelatase subunit CobS; KEGG: msl:Msil_0318 cobalt chelatase subunit CobS; PFAM: ATPase AAA YP_003757283.1 KEGG: bmr:BMI_I2045 DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003757284.1 PFAM: BolA family protein; KEGG: rpb:RPB_0538 BolA-like protein YP_003757285.1 KEGG: pla:Plav_1716 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_003757286.1 KEGG: msl:Msil_2318 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; shikimate kinase YP_003757287.1 KEGG: mdi:METDI3239 hypothetical protein YP_003757288.1 KEGG: pla:Plav_1719 hypothetical protein YP_003757289.1 KEGG: pla:Plav_1720 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003757290.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mmb:Mmol_0860 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003757291.1 KEGG: hoh:Hoch_6851 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_003757292.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: xau:Xaut_0509 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: acetyl-CoA carboxylase, subunit alpha, conserved region YP_003757293.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_3314 hypothetical protein YP_003757294.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: met:M446_5308 hypothetical protein YP_003757295.1 KEGG: mno:Mnod_4372 hypothetical protein YP_003757296.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_0510 hypothetical protein YP_003757297.1 PFAM: conserved hypothetical protein; KEGG: mch:Mchl_3606 hypothetical protein YP_003757298.1 KEGG: mes:Meso_3014 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SecA preprotein cross-linking region YP_003757299.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: azc:AZC_0311 PpiC-type peptidyl-prolyl cis-trans isomerase precursor YP_003757300.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: mlo:mll3461 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ YP_003757301.1 KEGG: psa:PST_2541 thiopurine S-methyltransferase; PFAM: thiopurine S-methyltransferase YP_003757302.1 KEGG: pla:Plav_1733 mutator MutT protein; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_003757303.1 PFAM: methyltransferase type 11; KEGG: pla:Plav_1735 methyltransferase type 11 YP_003757304.1 KEGG: rpc:RPC_0520 phosphoribosyltransferase; manually curated; PFAM: phosphoribosyltransferase YP_003757305.1 KEGG: pfl:PFL_0373 glutaredoxin; TIGRFAM: glutaredoxin; PFAM: glutaredoxin YP_003757306.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pla:Plav_1738 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003757307.1 PFAM: protein of unknown function DUF1178; KEGG: mpo:Mpop_3477 protein of unknown function DUF1178 YP_003757309.1 SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: mlo:mll5831 biotin synthetase; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein YP_003757310.1 KEGG: rpb:RPB_4344 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003757311.1 KEGG: nha:Nham_2815 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase YP_003757312.1 KEGG: nha:Nham_2814 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_003757313.1 KEGG: rhi:NGR_c25100 3-oxoacyl-[acyl-carrier-protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003757314.1 KEGG: pag:PLES_04211 hypothetical protein; PFAM: YceI family protein; SMART: YceI family protein YP_003757315.1 PFAM: cytochrome B561; KEGG: hch:HCH_01820 cytochrome b561 YP_003757316.1 KEGG: smt:Smal_1230 SMC domain protein YP_003757317.1 KEGG: bja:blr7297 hypothetical protein YP_003757318.1 PFAM: hemic uptake protein hemP; KEGG: hha:Hhal_0386 hypothetical protein YP_003757319.1 KEGG: rlt:Rleg2_0703 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003757320.1 KEGG: mlo:mlr4457 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003757321.1 KEGG: rru:Rru_A2971 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003757322.1 KEGG: oca:OCAR_7084 hypothetical protein YP_003757323.1 KEGG: ade:Adeh_0278 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003757324.1 KEGG: rle:RL3895 transmembrane protein YP_003757325.1 PFAM: protein of unknown function YGGT; KEGG: bid:Bind_2879 protein of unknown function YGGT YP_003757326.1 PFAM: protein of unknown function DUF167; KEGG: mlo:msl4154 hypothetical protein YP_003757327.1 KEGG: bja:bll0549 bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003757328.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: rec:RHECIAT_CH0000361 probable Mg-chelatase protein; SMART: ATPase AAA YP_003757329.1 KEGG: mpo:Mpop_0131 ISSpo8, transposase YP_003757330.1 KEGG: mgr:MGG_09796 hypothetical protein YP_003757331.1 KEGG: acp:A2cp1_3760 hypothetical protein YP_003757332.1 KEGG: pth:PTH_0648 permease YP_003757333.1 KEGG: rpb:RPB_1018 hypothetical protein YP_003757334.1 TIGRFAM: glutathione synthetase; KEGG: rpc:RPC_0319 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_003757335.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase; helicase; KEGG: pla:Plav_1460 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_003757336.1 KEGG: mes:Meso_3212 translaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_003757337.1 PFAM: FAD linked oxidase; KEGG: bja:bll2569 FAD dependent oxidoreductase YP_003757338.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pla:Plav_1457 integrase family protein YP_003757339.1 PFAM: GumN family protein; KEGG: mes:Meso_3402 GumN YP_003757340.1 KEGG: nha:Nham_0537 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003757341.1 KEGG: azc:AZC_4011 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003757342.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: transketolase; dehydrogenase E1 component; KEGG: met:M446_2164 2-oxoglutarate dehydrogenase E1 component; SMART: transketolase central region YP_003757343.1 TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding protein; KEGG: pzu:PHZ_c0159 succinyl-CoA synthetase alpha-subunit; SMART: CoA-binding domain protein YP_003757344.1 TIGRFAM: succinyl-CoA synthetase subunit beta; KEGG: oca:OCAR_6554 succinyl-CoA synthetase beta chain (SCS-alpha); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003757345.1 KEGG: mmr:Mmar10_1758 hypothetical protein YP_003757346.1 KEGG: mdi:METDI2311 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase YP_003757347.1 PFAM: AFG1-family ATPase; KEGG: mpo:Mpop_0870 AFG1-family ATPase YP_003757348.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_0325 hypothetical protein YP_003757349.1 KEGG: gau:GAU_0658 hypothetical protein YP_003757350.1 KEGG: atc:AGR_C_4790 succinate dehydrogenase iron-sulfur protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003757351.1 KEGG: ret:RHE_PE00350 L-asparaginase II protein YP_003757352.1 KEGG: msl:Msil_3563 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003757353.1 KEGG: bmr:BMI_I1925 succinate dehydrogenase, hydrophobic membrane anchor protein, TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_003757354.1 KEGG: mlo:mll4266 succinate dehydrogenase membrane anchor subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_003757355.1 PFAM: MaoC domain protein dehydratase; KEGG: azc:AZC_3739 MaoC family protein YP_003757356.1 KEGG: bid:Bind_1188 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase YP_003757357.1 TIGRFAM: pyridoxal kinase; KEGG: mes:Meso_3224 pyridoxamine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003757358.1 KEGG: vap:Vapar_1961 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase YP_003757359.1 KEGG: rru:Rru_A0128 Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_003757360.1 KEGG: bmr:BMI_I1845 carbonic anhydrase, PFAM: carbonic anhydrase YP_003757361.1 KEGG: bmr:BMI_I101 thiol:disulfide interchange protein, thioredoxin family; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: redoxin YP_003757362.1 KEGG: rpe:RPE_0314 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_003757363.1 KEGG: rhi:NGR_c32350 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein YP_003757365.1 KEGG: pla:Plav_1405 heme exporter protein CcmB; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome C biogenesis protein CcmB YP_003757366.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: pla:Plav_1404 heme exporter protein CcmA; SMART: ATPase AAA YP_003757367.1 KEGG: sme:SMc03846 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_003757368.1 PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_0383 hypothetical protein YP_003757369.1 KEGG: rce:RC1_2186 peptidyl-dipeptidase dcp; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_003757370.1 KEGG: oan:Oant_0102 hypothetical protein YP_003757371.1 PFAM: protein of unknown function UPF0005; KEGG: bmr:BMI_I91 hypothetical protein YP_003757372.1 PFAM: protein of unknown function DUF214; KEGG: mno:Mnod_1778 protein of unknown function DUF214 YP_003757373.1 KEGG: azl:AZL_000320 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003757374.1 PFAM: lipolytic protein G-D-S-L family; KEGG: rpa:RPA0195 acyl-CoA thioesterase precursor YP_003757375.1 KEGG: atc:AGR_C_4856 hypothetical 35.7 KDA protein in MalA 3'region (ORF3); TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX YP_003757376.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mdi:METDI1108 Zn-binding quinone oxidoreductase YP_003757377.1 KEGG: hne:HNE_3326 RNA methyltransferase; manually curated; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003757378.1 KEGG: xau:Xaut_0405 hypothetical protein YP_003757379.1 KEGG: bra:BRADO0206 Smr protein/MutS2 C-terminal; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_003757380.1 PFAM: MltA domain protein; 3D domain protein; KEGG: rpc:RPC_0300 MltA YP_003757381.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: avi:Avi_0009 membrane associated transporter protein YP_003757382.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: pla:Plav_1249 FxsA cytoplasmic membrane protein YP_003757383.1 KEGG: sjp:SJA_C1-08290 preprotein translocase SecB subunit; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_003757384.1 SMART: exonuclease; TIGRFAM: DNA polymerase III epsilon subunit; KEGG: rpt:Rpal_0303 DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III YP_003757385.1 KEGG: mlo:mlr4493 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003757386.1 KEGG: bcs:BCAN_A2115 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase YP_003757387.1 KEGG: pla:Plav_1255 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003757388.1 PFAM: protein of unknown function DUF299; KEGG: mes:Meso_3478 hypothetical protein YP_003757389.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: bra:BRADO1875 uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003757390.1 PFAM: conserved hypothetical protein; KEGG: mes:Meso_3475 hypothetical protein YP_003757391.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor domain protein; Rho termination factor RNA-binding; KEGG: bbt:BBta_0163 transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_003757392.1 PFAM: fatty acid hydroxylase; KEGG: nfa:nfa53570 hypothetical protein YP_003757393.1 PFAM: protein of unknown function DUF255; KEGG: azl:AZL_000080 hypothetical protein YP_003757394.1 KEGG: pla:Plav_1272 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003757395.1 KEGG: pla:Plav_1274 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003757396.1 KEGG: xau:Xaut_1835 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003757397.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: xau:Xaut_1836 cobyrinic acid ac-diamide synthase YP_003757398.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: pla:Plav_1277 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003757399.1 manually curated; TIGRFAM: phosphoribosyl-ATP diphosphatase; KEGG: bbt:BBta_0141 phosphoribosyl-ATP pyrophosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_003757400.1 TIGRFAM: pantothenate kinase; KEGG: pla:Plav_1229 pantothenate kinase YP_003757401.1 KEGG: dmo:Dmoj_GI20404 GI20404 gene product from transcript GI20404-RA YP_003757402.1 PFAM: PfkB domain protein; KEGG: azl:AZL_028340 adenosine kinase YP_003757403.1 KEGG: rpd:RPD_0434 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_003757404.1 PFAM: protein of unknown function DUF2159, secreted; KEGG: xau:Xaut_1447 hypothetical protein YP_003757405.1 manually curated; TIGRFAM: leucyl-tRNA synthetase; KEGG: mes:Meso_3209 leucyl-tRNA synthetase YP_003757406.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: eba:ebA669 hypothetical protein YP_003757407.1 PFAM: protein of unknown function DUF336; KEGG: sus:acid_6903 hypothetical protein YP_003757408.1 PFAM: alanine racemase domain protein; KEGG: avi:Avi_4380 hypothetical protein YP_003757409.1 KEGG: isc:IscW_ISCW003608 discs large protein YP_003757410.1 PFAM: protein of unknown function DUF344; KEGG: pmy:Pmen_4078 hypothetical protein YP_003757411.1 PFAM: aldo/keto reductase; KEGG: bgl:bglu_2g10820 oxidoreductase, MocA YP_003757412.1 KEGG: bbt:BBta_6578 hypothetical protein YP_003757413.1 SMART: beta-lactamase; KEGG: smd:Smed_5230 beta-lactamase domain-containing protein YP_003757414.1 SMART: Helix-turn-helix, AraC domain; KEGG: smd:Smed_5231 helix-turn-helix domain-containing protein YP_003757415.1 KEGG: mdi:METDI2870 DNA-binding membrane protein required for chromosome resolution and partitioning; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma YP_003757416.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: pla:Plav_1299 outer membrane lipoprotein carrier protein LolA YP_003757417.1 KEGG: mrd:Mrad2831_5013 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003757418.1 KEGG: mlo:mlr4237 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; transcriptional regulator YP_003757419.1 KEGG: azc:AZC_0089 hypothetical protein; manually curated; PFAM: ErfK/YbiS/YcfS/YnhG family protein YP_003757420.1 KEGG: mpo:Mpop_2051 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003757421.1 PFAM: nitrogen regulatory protein P-II; KEGG: xau:Xaut_2209 nitrogen regulatory protein P-II YP_003757422.1 KEGG: smd:Smed_3049 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_003757423.1 KEGG: rpe:RPE_0407 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding YP_003757424.1 KEGG: bbt:BBta_0366 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003757425.1 KEGG: ath:AT3G46760 protein kinase family protein YP_003757426.1 KEGG: sme:SMc03859 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003757427.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: xau:Xaut_1464 signal recognition particle protein; SMART: ATPase AAA YP_003757428.1 PFAM: lipid A 3-O-deacylase-related; KEGG: plt:Plut_0491 hypothetical protein YP_003757429.1 KEGG: rpt:Rpal_0251 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003757430.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: radical SAM protein; protein of unknown function UPF0004; KEGG: rce:RC1_2196 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003757431.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: mno:Mnod_4411 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_003757432.1 PFAM: Intracellular septation protein A; KEGG: xau:Xaut_0207 intracellular septation protein A YP_003757433.1 KEGG: rce:RC1_3945 intracellular septation protein A, TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_003757434.1 manually curated; PFAM: regulatory protein MarR; KEGG: MarR family transcriptional regulator; SMART: regulatory protein MarR YP_003757435.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: nwi:Nwi_2793 aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_003757436.1 KEGG: pla:Plav_0413 hypothetical protein YP_003757437.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: mno:Mnod_7390 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003757438.1 KEGG: rpe:RPE_2619 hypothetical protein YP_003757439.1 TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase; KEGG: bja:blr0686 phosphoglyceromutase; SMART: phosphoglycerate mutase YP_003757440.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: rce:RC1_3162 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003757441.1 KEGG: rpc:RPC_0040 inorganic pyrophosphatase; PFAM: inorganic pyrophosphatase YP_003757442.1 PFAM: GCN5-related N-acetyltransferase; KEGG: msl:Msil_1026 GCN5-related N-acetyltransferase YP_003757443.1 PFAM: Phasin; KEGG: oca:OCAR_5122 phasin YP_003757444.1 SMART: ATPase AAA; KEGG: mmr:Mmar10_3066 ATPase AAA YP_003757445.1 KEGG: nwi:Nwi_3095 hypothetical protein YP_003757446.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; KEGG: oan:Oant_3304 GTP-binding protein TypA; SMART: elongation factor G domain protein YP_003757447.1 KEGG: kva:Kvar_4695 MscS mechanosensitive ion channel YP_003757448.1 PFAM: peptidase M50; KEGG: mth:MTH816 sporulation protein IVFB related protein YP_003757449.1 KEGG: bra:BRADO0724 hypothetical protein YP_003757450.1 PFAM: TOBE domain protein; KEGG: ara:Arad_0570 molybdo-pterin binding protein YP_003757451.1 KEGG: pzu:PHZ_c0325 hydrolase, carbon-nitrogen family; TIGRFAM: N-carbamoylputrescine amidase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003757452.1 KEGG: cak:Caul_4697 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_003757453.1 KEGG: nph:NP4976A hypothetical protein YP_003757454.1 TIGRFAM: argininosuccinate synthase; KEGG: ara:Arad_4374 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003757455.1 KEGG: dac:Daci_1499 hypothetical protein YP_003757456.1 KEGG: mmi:MMAR_2683 PPE family protein, PPE31 YP_003757457.1 KEGG: rpd:RPD_0711 hypothetical protein YP_003757458.1 TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: mes:Meso_2859 radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003757459.1 TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; Clp ATPase-like; KEGG: bbt:BBta_0152 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase AAA YP_003757460.1 KEGG: hba:Hbal_3130 hypothetical protein YP_003757461.1 PFAM: 20S proteasome A and subunit betas; KEGG: oca:OCAR_4394 ATP-dependent protease peptidase subunit YP_003757462.1 KEGG: oca:OCAR_4395 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003757463.1 PFAM: protein of unknown function DUF2506; KEGG: rpb:RPB_0406 hypothetical protein YP_003757464.1 KEGG: mno:Mnod_7531 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003757465.1 KEGG: msm:MSMEG_0311 glycosyltransferase YP_003757466.1 KEGG: ypb:YPTS_4102 SinR-like protein YP_003757467.1 KEGG: tcr:508387.40 hypothetical protein YP_003757468.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: rpe:RPE_0367 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_003757469.1 KEGG: hch:HCH_03334 thiol-disulfide isomerase and thioredoxins YP_003757470.1 KEGG: azc:AZC_0213 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003757471.1 KEGG: fps:FP1220 hypothetical protein YP_003757472.1 KEGG: rhi:NGR_c34000 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003757473.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; DNA-binding protein; TIGRFAM: endonuclease III; KEGG: rpa:RPA0343 endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop YP_003757474.1 PFAM: protein of unknown function DUF2244, transmembrane; KEGG: rce:RC1_3158 hypothetical protein YP_003757475.1 KEGG: vei:Veis_0812 FAD dependent oxidoreductase YP_003757476.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase YP_003757477.1 KEGG: pla:Plav_1424 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003757478.1 KEGG: ccs:CCNA_00377 chromosome partition protein smc YP_003757479.1 KEGG: nvi:100117425 similar to kuzbanian YP_003757480.1 PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein YP_003757481.1 PFAM: methyltransferase type 11; KEGG: methyltransferase domain-containing protein YP_003757482.1 PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_2715 hypothetical protein YP_003757483.1 KEGG: nha:Nham_3584 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003757484.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_1149 transcriptional regulator YP_003757485.1 KEGG: pla:Plav_2305 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003757486.1 PFAM: general substrate transporter; KEGG: avi:Avi_2266 MFS permease YP_003757487.1 KEGG: rpc:RPC_0575 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003757488.1 KEGG: rpe:RPE_0094 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003757489.1 PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_3590 OmpA/MotB YP_003757490.1 KEGG: smd:Smed_3101 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003757491.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_0439 hypothetical protein YP_003757492.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: trmD; tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003757493.1 PFAM: protein of unknown function DUF1330; KEGG: mrd:Mrad2831_3703 hypothetical protein YP_003757494.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: msl:Msil_0166 ErfK/YbiS/YcfS/YnhG family protein YP_003757495.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: rpc:RPC_0333 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003757496.1 PFAM: NADPH-dependent FMN reductase; KEGG: pat:Patl_2576 NADPH-dependent FMN reductase YP_003757497.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: pla:Plav_3573 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003757498.1 KEGG: azc:AZC_0690 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70 YP_003757499.1 PFAM: GrpE protein; KEGG: smd:Smed_0012 ribulose-phosphate 3-epimerase YP_003757500.1 KEGG: nwi:Nwi_0194 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: negative regulator of class I heat shock protein YP_003757501.1 TIGRFAM: ribonuclease PH; KEGG: xau:Xaut_2535 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003757502.1 PFAM: protein of unknown function DUF1772; KEGG: xau:Xaut_3066 hypothetical protein YP_003757503.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01145 hypothetical protein YP_003757504.1 PFAM: Ham1 family protein; KEGG: azc:AZC_4290 deoxyribonucleotide triphosphate pyrophosphatase YP_003757505.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; KEGG: mrd:Mrad2831_2941 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_003757506.1 PFAM: SNARE associated Golgi protein; KEGG: azl:AZL_002820 hypothetical protein YP_003757507.1 KEGG: atc:AGR_L_2587 hypothetical protein YP_003757508.1 KEGG: gga:769807 similar to RanBP2 (Ran-binding protein 2) YP_003757509.1 KEGG: pla:Plav_1633 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003757510.1 PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: rhi:NGR_c26840 glutamyl-tRNA synthetase, class Ic YP_003757511.1 KEGG: ade:Adeh_0506 PAS/PAC sensor signal transduction histidine kinase YP_003757512.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpo:Mpop_0473 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_003757513.1 PFAM: protein of unknown function UPF0102; KEGG: mes:Meso_4010 hypothetical protein YP_003757514.1 KEGG: bja:bll0443 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003757515.1 KEGG: rlt:Rleg2_3654 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003757516.1 KEGG: rec:RHECIAT_CH0004152 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma YP_003757517.1 KEGG: nwi:Nwi_0432 OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003757518.1 TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: avi:Avi_4106 ATP synthase F1 subunit beta; SMART: ATPase AAA YP_003757519.1 KEGG: cak:Caul_4736 hypothetical protein YP_003757520.1 KEGG: pla:Plav_1466 ATP synthase F1 epsilon subunit; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like YP_003757521.1 PFAM: NUDIX hydrolase; KEGG: mes:Meso_3449 dinucleoside polyphosphate hydrolase YP_003757522.1 PFAM: NUDIX hydrolase; KEGG: mlo:mll3998 dinucleoside polyphosphate hydrolase YP_003757523.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: bja:blr0434 carboxy-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003757524.1 PFAM: peptidase M23; KEGG: bja:blr0433 hypothetical protein YP_003757525.1 PFAM: Hypoxia induced protein conserved region; KEGG: pla:Plav_1612 hypoxia induced protein region YP_003757526.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: pla:Plav_1609 ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003757527.1 KEGG: atc:AGR_L_2463 electron transfer flavoprotein beta-subunit (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS); PFAM: electron transfer flavoprotein alpha/beta-subunit; SMART: electron transfer flavoprotein alpha/beta-subunit YP_003757528.1 KEGG: rpa:RPA4749 electron transfer flavoprotein subunit alpha; PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; SMART: electron transfer flavoprotein alpha/beta-subunit YP_003757529.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: met:M446_2005 3-hydroxybutyryl-CoA dehydrogenase YP_003757530.1 KEGG: sde:Sde_1317 RND efflux transporter YP_003757531.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:acid_5492 short-chain dehydrogenase/reductase SDR YP_003757532.1 KEGG: hne:HNE_0420 pyrimidine 5'-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_003757533.1 KEGG: pla:Plav_0297 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003757534.1 PFAM: Clp domain protein; KEGG: ssc:100113399 basic proline-rich protein YP_003757535.1 KEGG: bja:blr8099 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_003757536.1 KEGG: azc:AZC_4053 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: hypothetical protein YP_003757537.1 manually curated; TIGRFAM: ribonuclease P protein component; KEGG: bmr:BMI_II1016 ribonuclease P; PFAM: ribonuclease P protein YP_003757538.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mes:Meso_0352 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003757539.1 KEGG: rpc:RPC_0820 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003757540.1 PFAM: protein of unknown function DUF411; KEGG: mes:Meso_4389 hypothetical protein YP_003757541.1 KEGG: oca:OCAR_4549 hypothetical protein; PFAM: Rhodanese domain protein; SMART: rhodanese YP_003757542.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mlr0353 cysteine synthase A YP_003757543.1 KEGG: osa:4334020 hypothetical protein YP_003757544.1 KEGG: cbe:Cbei_3763 periplasmic binding protein YP_003757545.1 KEGG: ang:An02g08610 hypothetical protein YP_003757546.1 KEGG: rfr:Rfer_2038 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein YP_003757547.1 KEGG: smd:Smed_5114 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003757548.1 KEGG: azl:AZL_006960 two-component hybrid sensor and regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003757549.1 PFAM: protein of unknown function DUF1345; KEGG: dar:Daro_0590 hypothetical protein YP_003757550.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold domain protein; hypothetical protein; response regulator receiver; KEGG: pla:Plav_0358 signal transduction histidine kinase; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein YP_003757551.1 KEGG: ccs:CCNA_01509 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein YP_003757552.1 KEGG: mno:Mnod_4423 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: short-chain dehydrogenase/reductase SDR YP_003757553.1 PFAM: extracellular ligand-binding receptor; KEGG: bja:blr0080 hypothetical protein YP_003757554.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_4615 acriflavin resistance protein YP_003757555.1 KEGG: rpb:RPB_3608 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003757556.1 KEGG: sbi:SORBI_04g030110 hypothetical protein YP_003757557.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: pst:PSPTO_3616 hypothetical protein YP_003757558.1 KEGG: vco:VC0395_0570 hypothetical protein YP_003757559.1 PFAM: HemY domain protein; KEGG: met:M446_4536 HemY domain-containing protein YP_003757560.1 KEGG: mrd:Mrad2831_2071 hypothetical protein YP_003757561.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: rsq:Rsph17025_4324 hypothetical protein YP_003757562.1 KEGG: pde:Pden_3630 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003757563.1 PFAM: peptidase M22 glycoprotease; manually curated; KEGG: oan:Oant_0974 DNA-binding/iron metalloprotein/AP endonuclease; TIGRFAM: metalloendopeptidase, glycoprotease family YP_003757564.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pla:Plav_1343 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_003757565.1 PFAM: protein of unknown function DUF55; KEGG: mes:Meso_3206 hypothetical protein YP_003757566.1 PFAM: ribosomal L11 methyltransferase; KEGG: xau:Xaut_1107 hypothetical protein YP_003757567.1 KEGG: xau:Xaut_1479 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003757568.1 PFAM: protein of unknown function DUF1674; KEGG: jan:Jann_4039 hypothetical protein YP_003757569.1 PFAM: peptidase M48 Ste24p; KEGG: smd:Smed_3192 heat shock protein HtpX YP_003757570.1 KEGG: rpe:RPE_0028 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003757571.1 PFAM: Heparinase II/III; KEGG: azc:AZC_4697 hypothetical protein YP_003757572.1 SMART: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: rpe:RPE_0026 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003757573.1 PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_4338 major facilitator superfamily MFS_1 YP_003757574.1 PFAM: protein of unknown function DUF477; KEGG: bid:Bind_3480 hypothetical protein YP_003757575.1 PFAM: protein of unknown function DUF477; KEGG: ccs:CCNA_03569 hypothetical protein YP_003757576.1 PFAM: LemA family protein; KEGG: azc:AZC_2562 LemA protein YP_003757577.1 KEGG: oan:Oant_4124 hypothetical protein YP_003757578.1 KEGG: dya:Dyak_GE15943 GE15943 gene product from transcript GE15943-RA YP_003757579.1 KEGG: nvi:100121963 similar to conserved hypothetical protein YP_003757580.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bmr:BMI_II888 hypothetical protein YP_003757581.1 KEGG: pla:Plav_1312 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain YP_003757582.1 KEGG: mno:Mnod_5189 peptidase S16 lon domain protein; PFAM: peptidase S16; SMART: peptidase S16 lon domain protein YP_003757583.1 PFAM: protein of unknown function DUF343; KEGG: bid:Bind_2731 hypothetical protein YP_003757584.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: azl:AZL_024550 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_003757585.1 KEGG: mrd:Mrad2831_1116 hypothetical protein YP_003757586.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: pla:Plav_3599 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_003757587.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: mlo:mll5321 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_003757588.1 KEGG: pla:Plav_3604 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_003757589.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: oca:OCAR_4526 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003757590.1 PFAM: UspA domain protein; KEGG: mes:Meso_4036 hypothetical protein YP_003757591.1 PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: bbt:BBta_0040 NifU protein YP_003757592.1 PFAM: nitroreductase; KEGG: bur:Bcep18194_B1060 hypothetical protein YP_003757593.1 PFAM: peptidase M22 glycoprotease; KEGG: azc:AZC_4704 glycoprotease YP_003757594.1 KEGG: azl:AZL_000470 ribosomal-protein-alanine N-acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003757595.1 PFAM: ferric-uptake regulator; KEGG: cak:Caul_0013 ferric uptake regulator family protein YP_003757596.1 KEGG: pla:Plav_3616 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003757597.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; radical SAM protein; KEGG: mno:Mnod_0235 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB YP_003757598.1 PFAM: PhoH family protein; KEGG: atc:AGR_C_625 PhoH-like protein YP_003757599.1 PFAM: protein of unknown function UPF0054; KEGG: azc:AZC_0010 hypothetical protein YP_003757600.1 KEGG: sme:SMc01112 hypothetical protein; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_003757601.1 KEGG: rpa:RPA0444 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003757602.1 KEGG: rhi:NGR_c00470 transcriptional regulator; PFAM: hypothetical protein; SMART: hypothetical protein YP_003757603.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: rpb:RPB_1588 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003757604.1 KEGG: pzu:PHZ_c3447 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003757605.1 PFAM: protein of unknown function DUF150; KEGG: bmc:BAbS19_I20230 hypothetical protein YP_003757606.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; K Homology, type 1, subgroup; KEGG: msl:Msil_2297 NusA antitermination factor; SMART: KH domain protein YP_003757607.1 PFAM: protein of unknown function DUF448; KEGG: oan:Oant_0748 hypothetical protein YP_003757608.1 KEGG: bja:bll0783 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein YP_003757609.1 KEGG: cpi:Cpin_0371 hypothetical protein YP_003757610.1 KEGG: mno:Mnod_4619 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003757611.1 KEGG: oca:OCAR_4505 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_003757612.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: dac:Daci_2795 3''-kinase YP_003757613.1 KEGG: sit:TM1040_0081 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003757614.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: msl:Msil_0268 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; polynucleotide phosphorylase, phosphorolytic RNA-binding YP_003757615.1 KEGG: sgr:SGR_268 secreted metalloprotease YP_003757616.1 KEGG: rce:RC1_3325 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003757617.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_4644 enoyl-(acyl carrier protein) reductase YP_003757618.1 PFAM: beta-ketoacyl synthase; KEGG: oca:OCAR_4498 3-oxoacyl-(acyl carrier protein) synthase I YP_003757619.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: rpc:RPC_0349 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003757620.1 PFAM: ferric-uptake regulator; KEGG: ret:RHE_CH00106 iron transcriptional regulator protein YP_003757621.1 PFAM: protein of unknown function DUF1058; KEGG: msl:Msil_2486 protein of unknown function DUF1058 YP_003757622.1 KEGG: mag:amb0195 lactate dehydrogenase and related dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003757623.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: xau:Xaut_4128 UBA/ThiF-type NAD/FAD binding protein YP_003757624.1 KEGG: mno:Mnod_5186 cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003757625.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: bja:bll0758 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_003757626.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: xau:Xaut_0078 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003757627.1 PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 hypothetical protein YP_003757628.1 KEGG: afl:Aflv_2264 sodium:solute symporter; TIGRFAM: solute symporter protein; PFAM: Na+/solute symporter YP_003757629.1 KEGG: bte:BTH_I0600 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_003757630.1 KEGG: msl:Msil_0973 hypothetical protein YP_003757631.1 KEGG: avi:Avi_0827 two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003757632.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: ade:Adeh_2257 hypothetical protein YP_003757633.1 PFAM: virulence factor family protein; KEGG: virulence factor family protein YP_003757634.1 PFAM: acyltransferase 3; KEGG: sun:SUN_0329 hypothetical protein YP_003757635.1 PFAM: rhomboid family protein; KEGG: hau:Haur_2553 rhomboid family protein YP_003757636.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: pla:Plav_1742 ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11 YP_003757637.1 KEGG: pla:Plav_1743 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003757638.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: azc:AZC_4491 phosphoenolpyruvate-protein phosphotransferase; SMART: GAF domain protein YP_003757639.1 KEGG: pla:Plav_3060 SH3 type 3 domain-containing protein YP_003757640.1 KEGG: mes:Meso_2999 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein YP_003757641.1 KEGG: nha:Nham_0469 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003757643.1 KEGG: mno:Mnod_0114 hypothetical protein YP_003757644.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: rpd:RPD_4095 ATPase AAA-2; SMART: ATPase AAA YP_003757645.1 PFAM: porin; KEGG: oan:Oant_0133 porin YP_003757646.1 SMART: regulatory protein LuxR; KEGG: mex:Mext_1995 regulatory protein LuxR YP_003757647.1 KEGG: mno:Mnod_1552 VrrB protein YP_003757648.1 KEGG: nha:Nham_0174 hypothetical protein YP_003757649.1 PFAM: citrate transporter; KEGG: azl:AZL_d00120 hypothetical protein YP_003757650.1 PFAM: peptidase M23; KEGG: bbt:BBta_1196 metalloendopeptidase YP_003757651.1 KEGG: azl:AZL_015580 hypothetical protein YP_003757652.1 PFAM: iron permease FTR1; KEGG: azc:AZC_2743 high-affinity Fe2+/Pb2+ permease YP_003757653.1 PFAM: protein of unknown function DUF1348; KEGG: aba:acid345_2217 hypothetical protein YP_003757654.1 KEGG: bid:Bind_1265 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003757655.1 KEGG: bhe:BH00390 ubiquinone biosynthesis protein AarF; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC transporter YP_003757656.1 KEGG: ure:UREG_02770 hypothetical protein YP_003757657.1 KEGG: rpe:RPE_0470 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_003757658.1 SMART: Formamidopyrimidine-DNA glycosylase catalytic domain protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: msl:Msil_3033 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003757659.1 KEGG: sal:Sala_0839 hypothetical protein YP_003757660.1 KEGG: kra:Krad_4256 drug resistance transporter EmrB/QacA subfamily YP_003757661.1 KEGG: smd:Smed_0001 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20