-- dump date   	20140619_115310
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002120671.1	KEGG: aae:aq_322 chromosome replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase
YP_002120672.1	PFAM: protein of unknown function DUF81; KEGG: sto:ST2237 hypothetical protein
YP_002120673.1	PFAM: t-RNA-binding domain protein; KEGG: aae:aq_422 methionyl-tRNA synthetase beta subunit
YP_002120674.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: cth:Cthe_0282 glycogen/starch synthases, ADP-glucose type
YP_002120675.1	KEGG: aae:aq_1468 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_002120676.1	PFAM: protein of unknown function DUF147; KEGG: aae:aq_1467 hypothetical protein
YP_002120677.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_0310 RND efflux system, outer membrane lipoprotein, NodT family
YP_002120678.1	PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_0311 secretion protein HlyD family protein
YP_002120679.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sul:SYO3AOP1_0312 ABC transporter
YP_002120680.1	PFAM: protein of unknown function DUF214; KEGG: sul:SYO3AOP1_0313 protein of unknown function DUF214
YP_002120681.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: aae:aq_1174 rare lipoprotein A
YP_002120682.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: aae:aq_906 phosphate transport system regulatory protein
YP_002120683.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aae:aq_905 histidine kinase sensor protein
YP_002120684.1	PFAM: major facilitator superfamily MFS_1; KEGG: tpd:Teth39_1328 major facilitator superfamily MFS_1
YP_002120685.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_002120686.1	KEGG: sul:SYO3AOP1_0239 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_002120687.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aae:aq_1464 pseudouridylate synthase
YP_002120688.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_002120689.1	KEGG: aae:aq_1973 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_002120690.1	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1
YP_002120691.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: cth:Cthe_0738 copper ion binding protein
YP_002120692.1	KEGG: sul:SYO3AOP1_0342 transposase
YP_002120693.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002120694.1	PFAM: regulatory protein MerR; KEGG: aae:aq_702 transcriptional regulator (MerR family)
YP_002120695.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: sul:SYO3AOP1_0812 cupin 2 conserved barrel domain protein
YP_002120696.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: aae:aq_607 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase
YP_002120697.1	PFAM: tRNA synthetase class II (D K and N); KEGG: aae:aq_763 lysyl-tRNA synthetase (genX) homolog
YP_002120698.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: aae:aq_831 trans-regulatory protein ExsB
YP_002120699.1	PFAM: chemotaxis sensory transducer; KEGG: tme:Tmel_1579 methyl-accepting chemotaxis sensory transducer
YP_002120700.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2671 tetratricopeptide TPR_2
YP_002120701.1	KEGG: glo:Glov_0518 hypothetical protein
YP_002120702.1	KEGG: sul:SYO3AOP1_0346 carboxylesterase
YP_002120703.1	PFAM: aminotransferase class-III; KEGG: sul:SYO3AOP1_0347 aminotransferase class-III
YP_002120704.1	KEGG: sul:SYO3AOP1_0348 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_002120705.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sul:SYO3AOP1_1306 redoxin domain protein
YP_002120706.1	PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; KEGG: aae:aq_1628 DNA polymerase I 3'-5' exo domain
YP_002120707.1	PFAM: protein of unknown function DUF151; KEGG: aae:aq_283 hypothetical protein
YP_002120709.1	KEGG: aae:aq_1171a ferredoxin
YP_002120710.1	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: aae:aq_1169 pyruvate ferredoxin oxidoreductase, gamma subunit
YP_002120711.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: aae:aq_1168 pyruvate ferredoxin oxidoreductase, beta subunit
YP_002120712.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: aae:aq_1167 pyruvate ferredoxin oxidoreductase, alpha subunit
YP_002120713.1	PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1166 hypothetical protein
YP_002120714.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: aae:aq_671 hydrogenase expression/formation protein B
YP_002120715.1	PFAM: HupH hydrogenase expression protein; KEGG: aae:aq_669 hypothetical protein
YP_002120716.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: aae:aq_672 transcriptional regulatory protein HypF
YP_002120717.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: aae:aq_1021 hydrogenase accessory protein HypA
YP_002120718.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: aae:aq_1019 hydrogenase expression/formation protein
YP_002120719.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: aae:aq_1157 hydrogenase expression/formation protein HypD
YP_002120720.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: hhe:HH0324 hydrogenase isoenzyme formation protein HypC
YP_002120721.1	TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: aae:aq_667 HupD hydrogenase related function
YP_002120722.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: aae:aq_665 Ni/Fe hydrogenase B-type cytochrome subunit
YP_002120723.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_662 hydrogenase large chain
YP_002120724.1	KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein
YP_002120725.1	PFAM: chemotaxis sensory transducer; KEGG: cbk:CLL_A1972 methyl-accepting chemotaxis sensory transducer
YP_002120726.1	KEGG: aae:aq_1862 hypothetical protein
YP_002120727.1	KEGG: sul:SYO3AOP1_0629 hypothetical protein
YP_002120728.1	KEGG: aae:aq_1776  protein
YP_002120729.1	PFAM: protein of unknown function DUF255; KEGG: sul:SYO3AOP1_0787 protein of unknown function DUF255
YP_002120730.1	PFAM: phosphoesterase DHHA1; KEGG: sul:SYO3AOP1_0354 phosphoesterase DHHA1
YP_002120731.1	PFAM: RNA binding S1 domain protein; KEGG: aae:aq_1485 30S ribosomal protein S1
YP_002120733.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: aae:aq_342 MazG protein
YP_002120734.1	KEGG: nis:NIS_0600 hypothetical protein
YP_002120735.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_002120736.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_1244 hypothetical protein
YP_002120737.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: aae:aq_436 5-amino-6-(5-phosphoribosylamino)uracil reductase
YP_002120738.1	KEGG: sul:SYO3AOP1_1581 hypothetical protein
YP_002120739.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_002120740.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: cte:CT0726 HNH endonuclease family protein
YP_002120741.1	PFAM: ribosomal protein L28; KEGG: aae:aq_080 50S ribosomal protein L28
YP_002120742.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: aae:aq_135 NADH dehydrogenase (ubiquinone)
YP_002120743.1	PFAM: phosphate-selective porin O and P; KEGG: aae:aq_1862 hypothetical protein
YP_002120744.1	PFAM: nitrogen-fixing NifU domain protein; protein of unknown function DUF59; KEGG: sul:SYO3AOP1_0399 nitrogen-fixing NifU domain protein
YP_002120745.1	PFAM: manganese and iron superoxide dismutase; KEGG: aae:aq_1499 superoxide dismutase (Fe/Mn family)
YP_002120746.1	KEGG: aoe:Clos_2113 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_002120747.1	PFAM: Lytic transglycosylase catalytic; KEGG: aae:aq_1420 hypothetical protein
YP_002120748.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aae:aq_1288 general secretion pathway protein D
YP_002120749.1	Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_002120750.1	PFAM: SMF family protein; KEGG: aae:aq_1191 hypothetical protein
YP_002120751.1	PFAM: protein of unknown function DUF558; KEGG: aae:aq_165 hypothetical protein
YP_002120752.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpe:Tpen_1456 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_002120753.1	KEGG: aae:aq_1569  protein
YP_002120754.1	KEGG: bur:Bcep18194_B0411 hypothetical protein
YP_002120755.1	KEGG: gox:GOX2657  sulfate-binding protein
YP_002120756.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2122 peptide transport system ATP-binding protein
YP_002120757.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aae:aq_2120 hemolysin homolog protein
YP_002120758.1	KEGG: aae:aq_2059 hypothetical protein
YP_002120759.1	TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sul:SYO3AOP1_1587 acetate/CoA ligase
YP_002120760.1	involved in de novo purine biosynthesis
YP_002120761.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: sul:SYO3AOP1_0405 2-nitropropane dioxygenase NPD
YP_002120762.1	KEGG: aae:aq_2134  protein
YP_002120764.1	KEGG: aae:aq_125  protein
YP_002120765.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002120766.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sul:SYO3AOP1_1718 transposase, IS605 OrfB family
YP_002120767.1	TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; KEGG: sul:SYO3AOP1_1578 phosphoribosylglycinamide formyltransferase 2
YP_002120768.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002120769.1	KEGG: aae:aq_454 lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein
YP_002120770.1	KEGG: aae:aq_087 hypothetical protein
YP_002120771.1	KEGG: aae:aq_088 hypothetical protein
YP_002120772.1	PFAM: Sterol-binding domain protein; KEGG: aae:aq_090 hypothetical protein
YP_002120773.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: aae:aq_091m AAA family ATPase
YP_002120774.1	KEGG: aae:aq_1427 lipid A disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19
YP_002120776.1	PFAM: sodium/calcium exchanger membrane region; KEGG: sul:SYO3AOP1_1150 sodium/calcium exchanger membrane region
YP_002120777.1	PFAM: histone family protein DNA-binding protein; KEGG: sul:SYO3AOP1_1244 histone family protein DNA-binding protein
YP_002120778.1	KEGG: aae:aq_1434 pilin
YP_002120779.1	PFAM: ribosomal protein L21; KEGG: tte:TTE0913 50S ribosomal protein L21
YP_002120780.1	involved in the peptidyltransferase reaction during translation
YP_002120781.1	PFAM: regulatory protein TetR; KEGG: aae:aq_2185 hypothetical protein
YP_002120782.1	PFAM: glycoside hydrolase family 57; KEGG: cau:Caur_1163 glycoside hydrolase family 57
YP_002120783.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002120784.1	KEGG: aae:aq_1426  protein
YP_002120785.1	TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: sul:SYO3AOP1_0808 MoaD family protein
YP_002120786.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_002120787.1	PFAM: protein of unknown function UPF0079; KEGG: sul:SYO3AOP1_0033 protein of unknown function UPF0079
YP_002120788.1	PFAM: MCP methyltransferase CheR-type; KEGG: tex:Teth514_1609 protein-glutamate O-methyltransferase
YP_002120789.1	KEGG: aae:aq_1489 tRNA guanine-N1 methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_002120790.1	KEGG: sul:SYO3AOP1_1583 ATP synthase protein I
YP_002120791.1	PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: aae:aq_951 chorismate mutase/prephenate dehydratase
YP_002120792.1	KEGG: aae:aq_1201  protein
YP_002120793.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aae:aq_1602 protein-export membrane protein SecF
YP_002120795.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_2186 sulfide-quinone reductase
YP_002120797.1	PFAM: protein of unknown function DUF81; KEGG: tbd:Tbd_2380 hypothetical protein
YP_002120798.1	PFAM: thymidylate kinase; KEGG: aae:aq_969 thymidylate kinase
YP_002120799.1	KEGG: aae:aq_1472 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_002120800.1	PFAM: protein of unknown function DUF374; KEGG: fnu:FN1269 hypothetical lipoprotein
YP_002120801.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aae:aq_111 glutamine synthetase
YP_002120802.1	PFAM: nitrogen regulatory protein P-II; KEGG: aae:aq_109 nitrogen regulatory PII protein
YP_002120803.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin binding domain; molybdopterin cofactor biosynthesis MoaC region; KEGG: sul:SYO3AOP1_1766 molybdenum cofactor biosynthesis protein C
YP_002120804.1	PFAM: purine phosphorylase family 2; KEGG: aae:aq_568 probable 5'-methylthioadenosine phosphorylase
YP_002120805.1	PFAM: polysaccharide deacetylase; KEGG: cbf:CLI_2851 polysaccharide deacetylase family protein
YP_002120806.1	KEGG: sul:SYO3AOP1_0421 hypothetical protein
YP_002120807.1	KEGG: aae:aq_521 D-alanine:D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp
YP_002120808.1	KEGG: aae:aq_520 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_002120809.1	KEGG: nis:NIS_0136 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002120810.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
YP_002120811.1	PFAM: EAL domain protein; KEGG: nmu:Nmul_A1138 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
YP_002120812.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_002120813.1	KEGG: aae:aq_221 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_002120814.1	KEGG: aae:aq_220 deoxyuridine 5'triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_002120815.1	KEGG: aae:aq_196 phosphoribosylanthranilate transferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like
YP_002120816.1	PFAM: protein of unknown function DUF178; KEGG: aae:aq_1070 hypothetical protein
YP_002120817.1	binds and unfolds substrates as part of the ClpXP protease
YP_002120818.1	KEGG: aae:aq_1339 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_002120819.1	PFAM: trigger factor domain; KEGG: aae:aq_1340 trigger factor
YP_002120820.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: pab:PAB0825 translation initiation inhibitor
YP_002120821.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_002120822.1	PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: AAA ATPase; KEGG: pfo:PflO1_0822 ABC transporter-like
YP_002120823.1	TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: aae:aq_833 flagellar protein FlgA
YP_002120824.1	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_834 flagellar hook basal-body protein FlgG
YP_002120825.1	KEGG: sml:Smlt1009  glycine-rich autotransporter protein
YP_002120826.1	KEGG: aae:aq_1436  protein
YP_002120827.1	KEGG: aae:aq_1435 pilin
YP_002120828.1	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: aae:aq_1372 argininosuccinate lyase
YP_002120829.1	PFAM: cytochrome c assembly protein; KEGG: aae:aq_055 cytochrome c biogenesis protein
YP_002120830.1	KEGG: aae:aq_849 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002120831.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_002120832.1	catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate
YP_002120833.1	PFAM: acylphosphatase; KEGG: sso:SSO0887 acylphosphatase
YP_002120834.1	PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: aae:aq_652 lipoprotein
YP_002120835.1	PFAM: Inorganic pyrophosphatase; KEGG: aae:aq_1547 inorganic pyrophosphatase
YP_002120836.1	KEGG: aae:aq_1546 polysialic acid capsule expression protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_002120837.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_2154 phosphotidylglycerophosphate synthase
YP_002120838.1	KEGG: aae:aq_1185 hypothetical protein
YP_002120839.1	KEGG: aae:aq_1184 flagellar basal body rod protein FlgB
YP_002120840.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_1183 flagellar biosynthesis FlgC
YP_002120841.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: aae:aq_1182a flagellar hook-basal body protein
YP_002120842.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: aae:aq_1182 Flagellar M-ring protein
YP_002120843.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: sul:SYO3AOP1_1659 flagellar motor switch protein FliM
YP_002120844.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: cno:NT01CX_1869 flagellar motor switch protein
YP_002120845.1	TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: mtp:Mthe_0686 1-phosphofructokinase
YP_002120846.1	PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: nis:NIS_0927 fructose-bisphosphate aldolase, class I
YP_002120847.1	KEGG: aae:aq_1534  protein
YP_002120848.1	PFAM: Mammalian cell entry related domain protein; KEGG: aae:aq_1533  ABC transport system substrate-bindin protein
YP_002120849.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_1531  ABC transport system ATP-binding protein
YP_002120850.1	PFAM: protein of unknown function DUF140; KEGG: aae:aq_1530  ABC transport system permease protein
YP_002120852.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: aae:aq_147 cobalamin synthesis related protein CobW
YP_002120853.1	KEGG: ccv:CCV52592_2170 pyridoxal phosphate-dependent enzyme
YP_002120854.1	KEGG: tac:Ta1156 hypothetical membrane protein
YP_002120855.1	KEGG: sul:SYO3AOP1_0850 hypothetical protein
YP_002120856.1	TIGRFAM: DNA binding domain protein, excisionase family
YP_002120857.1	KEGG: aae:aq_aa40 hypothetical protein
YP_002120858.1	TIGRFAM: transcriptional activator, Baf family; KEGG: ccv:CCV52592_0993 type III pantothenate kinase (pantothenic acid kinase)(PanK-III)
YP_002120859.1	KEGG: aae:aq_2023 inosine monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_002120860.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: aae:aq_064b  sec-independent protein translocase protein
YP_002120861.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: aae:aq_064c  sec-independent protein translocase protein
YP_002120862.1	KEGG: sul:SYO3AOP1_0929  chemotaxis phosphatase, CheZ
YP_002120863.1	PFAM: response regulator receiver; KEGG: sul:SYO3AOP1_0930 response regulator receiver protein
YP_002120864.1	PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_0922 methyl-accepting chemotaxis sensory transducer
YP_002120865.1	KEGG: sul:SYO3AOP1_0923 methyl-accepting chemotaxis sensory transducer
YP_002120866.1	PFAM: response regulator receiver; CheW domain protein; KEGG: sul:SYO3AOP1_0924 response regulator receiver modulated chemotaxis protein CheW
YP_002120867.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sul:SYO3AOP1_0926 chemotaxis protein CheA
YP_002120868.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: aae:aq_566 biotin [acetyl-CoA-carboxylase] ligase
YP_002120869.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: aae:aq_157  protein
YP_002120870.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: aae:aq_538 UDP-3-O-[3-hydroxymyristoyl] glucosamine N acyltransferase
YP_002120871.1	KEGG: aae:aq_359  protein
YP_002120872.1	PFAM: protein of unknown function DUF114; KEGG: aae:aq_814 hypothetical protein
YP_002120873.1	KEGG: aae:aq_1526 DNA polymerase III delta' subunit
YP_002120874.1	PFAM: aminodeoxychorismate lyase; KEGG: aae:aq_775 hypothetical protein
YP_002120875.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: aae:aq_1498  Holliday junction resolvase
YP_002120876.1	PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002120877.1	KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_002120878.1	KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein
YP_002120879.1	PFAM: EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator
YP_002120881.1	KEGG: asu:Asuc_0762 lytic transglycosylase catalytic
YP_002120882.1	PFAM: cell cycle protein; KEGG: aae:aq_1139 cell division protein FtsW
YP_002120883.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002120884.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nis:NIS_0636 hypothetical protein
YP_002120885.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: aae:aq_574 NADH dehydrogenase I chain E
YP_002120886.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: aae:aq_573 NADH dehydrogenase I chain F
YP_002120887.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002120888.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_002120890.1	KEGG: aae:aq_021 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I
YP_002120891.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002120892.1	KEGG: bbt:BBta_1404 hypothetical protein
YP_002120893.1	KEGG: aae:aq_1660 hypothetical protein
YP_002120894.1	KEGG: sul:SYO3AOP1_1078 dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_002120900.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase
YP_002120901.1	TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aae:aq_1556 cysteine synthase, O-acetylserine (thiol) lyase B
YP_002120902.1	PFAM: protein of unknown function DUF177; KEGG: aae:aq_1103 hypothetical protein
YP_002120903.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002120904.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_002120905.1	KEGG: aae:aq_1099 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_002120906.1	KEGG: aae:aq_1356  protein
YP_002120907.1	PFAM: oxidoreductase molybdopterin binding; KEGG: aae:aq_979 hypothetical protein
YP_002120908.1	PFAM: Ppx/GppA phosphatase; KEGG: aae:aq_891 exopolyphosphatase
YP_002120910.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: tme:Tmel_0941 ATPase associated with various cellular activities, AAA_3
YP_002120911.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_563 hypothetical protein
YP_002120913.1	KEGG: msy:MS53_0054 hypothetical protein
YP_002120914.1	KEGG: aae:aq_1478 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein
YP_002120915.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aae:aq_745 twitching motility protein PilT
YP_002120916.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aae:aq_1971 type IV pilus assembly protein TapB
YP_002120917.1	KEGG: aae:aq_544 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_002120918.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002120919.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif
YP_002120920.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: aae:aq_1930b preprotein translocase subunit SecE
YP_002120921.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: aae:aq_1931 transcription antitermination protein NusG
YP_002120922.1	binds directly to 23S ribosomal RNA
YP_002120923.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002120924.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_002120925.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_002120926.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002120927.1	KEGG: aae:aq_1945 RNA polymerase beta prime chain; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein
YP_002120928.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_002120929.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002120930.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002120931.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002120932.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002120933.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_002120934.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_002120935.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002120936.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002120937.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002120938.1	TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: sul:SYO3AOP1_0286 ribosomal protein L22
YP_002120939.1	KEGG: aae:aq_017 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein
YP_002120940.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002120941.1	PFAM: ribosomal protein L29; KEGG: ape:APE_0362a 50S ribosomal protein L29P
YP_002120942.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_002120943.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002120944.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002120945.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002120946.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_002120947.1	PFAM: ribosomal protein S8; KEGG: aae:aq_1651 30S ribosomal protein S8
YP_002120948.1	PFAM: ribosomal protein L6; KEGG: sul:SYO3AOP1_0276 ribosomal protein L6
YP_002120949.1	PFAM: ribosomal protein L18P/L5E; KEGG: aae:aq_1648 50S ribosomal protein L18
YP_002120950.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002120951.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_002120952.1	PFAM: ribosomal protein L15; KEGG: aae:aq_1642 50S ribosomal protein L15
YP_002120953.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_002120954.1	PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: sul:SYO3AOP1_0270 nucleoside-triphosphate--adenylate kinase
YP_002120955.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: aae:aq_076 methionyl aminopeptidase
YP_002120956.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002120957.1	PFAM: ribosomal protein L36; KEGG: tpd:Teth39_0398 ribosomal protein L36
YP_002120958.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002120959.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002120960.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_002120961.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002120962.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002120963.1	PFAM: protein of unknown function YGGT; KEGG: btk:BT9727_3640 hypothetical protein
YP_002120964.1	KEGG: aae:aq_1720 signal recognition particle receptor protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002120965.1	PFAM: ribosomal protein S16; KEGG: aae:aq_123 30S ribosomal protein S16
YP_002120966.1	KEGG: aae:aq_124a hypothetical protein
YP_002120967.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sul:SYO3AOP1_0981 DEAD/DEAH box helicase domain protein
YP_002120968.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pub:SAR11_0604 phosphomethylpyrimidine kinase
YP_002120969.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_413 ABC transporter
YP_002120970.1	KEGG: cha:CHAB381_0509 hypothetical protein
YP_002120971.1	KEGG: sun:SUN_0338 hypothetical protein
YP_002120972.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_7491 glycosyl transferase, family 2
YP_002120973.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: aae:aq_553 fumarate reductase iron-sulfur protein
YP_002120974.1	KEGG: aae:aq_253 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_002120975.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cpb:Cphamn1_1863 molybdopterin oxidoreductase
YP_002120976.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cpb:Cphamn1_1864 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_002120977.1	PFAM: Polysulphide reductase NrfD; KEGG: cch:Cag_0952 polysulfide reductase, subunit C
YP_002120978.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aoe:Clos_0209 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_002120979.1	PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_1662 methyl-accepting chemotaxis sensory transducer
YP_002120980.1	KEGG: aae:aq_977 hypothetical protein
YP_002120981.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: aae:aq_1890 rRNA methylase
YP_002120982.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_002120983.1	KEGG: pho:PH0283 hypothetical protein
YP_002120984.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aae:aq_128 hypothetical protein
YP_002120986.1	PFAM: cytochrome c class I; KEGG: pap:PSPA7_0619 cytochrome c-551 precursor
YP_002120987.1	KEGG: rso:RSc0196  cytochrome c1 signal peptide protein
YP_002120988.1	PFAM: Rhodanese domain protein; KEGG: aae:aq_477 hypothetical protein
YP_002120989.1	PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: aae:aq_409 aspartate carbamoyltransferase catalytic chain
YP_002120990.1	PFAM: PSP1 domain protein; KEGG: aae:aq_1527 hypothetical protein
YP_002120991.1	PFAM: protein of unknown function DUF152; KEGG: aae:aq_167 hypothetical protein
YP_002120992.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002120993.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: aae:aq_423  segregation and condensation protein A
YP_002120994.1	PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: aae:aq_1326 molybdopterin-guainine dinucleotide biosynthesis protein B
YP_002120995.1	KEGG: tma:TM1784 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_002120996.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aae:aq_736 dihydrolipoamide dehydrogenase
YP_002120998.1	PFAM: peptidase M16 domain protein; KEGG: aae:aq_2204 processing protease
YP_002120999.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bph:Bphy_1271 tetratricopeptide TPR_2 repeat protein
YP_002121001.1	PFAM: PspA/IM30 family protein; KEGG: bte:BTH_I2081 PspA/IM30 family superfamily
YP_002121002.1	KEGG: sul:SYO3AOP1_1250  alkylmercury lyase
YP_002121003.1	KEGG: nph:NP2586A probable anaerobic dehydrogenase subunit
YP_002121004.1	KEGG: pas:Pars_0497 nitrate reductase subunit, conjectural
YP_002121005.1	KEGG: nph:NP2584A anaerobic dehydrogenase subunit (probable iron-sulfur protein)
YP_002121006.1	PFAM: molybdopterin oxidoreductase; KEGG: dar:Daro_2584 molybdopterin oxidoreductase:molydopterin dinucleotide-binding region
YP_002121007.1	PFAM: cytochrome d1 heme region; KEGG: sul:SYO3AOP1_0462 hydroxylamine reductase
YP_002121008.1	PFAM: cytochrome c class I; cytochrome d1 heme region; KEGG: sul:SYO3AOP1_0461 cytochrome d1 heme region
YP_002121009.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sul:SYO3AOP1_0459 radical SAM domain protein
YP_002121010.1	PFAM: cytochrome d1 heme region; KEGG: sun:SUN_0249 heme d1 biosynthesis protein NirF
YP_002121011.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sul:SYO3AOP1_0051 uroporphyrin-III C-methyltransferase
YP_002121012.1	KEGG: nis:NIS_1776 transcriptional regulator, AsnC/Lrp family
YP_002121013.1	TIGRFAM: siroheme synthase; KEGG: aae:aq_1237 precorrin-2 oxidase / ferrochelatase
YP_002121014.1	KEGG: sul:SYO3AOP1_0468 hypothetical protein
YP_002121015.1	KEGG: sul:SYO3AOP1_0467 hypothetical protein
YP_002121016.1	PFAM: protein of unknown function DUF59; KEGG: ccv:CCV52592_1842 YitW
YP_002121017.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: sul:SYO3AOP1_0465 transcriptional regulator, Crp/Fnr family
YP_002121018.1	KEGG: sul:SYO3AOP1_0471 hypothetical protein
YP_002121019.1	PFAM: cytochrome c oxidase subunit I; KEGG: sul:SYO3AOP1_0472 nitric-oxide reductase
YP_002121020.1	KEGG: aae:aq_1862 hypothetical protein
YP_002121021.1	PFAM: regulatory protein TetR; KEGG: aae:aq_2179 transcriptional regulator (TetR/AcrR family)
YP_002121022.1	PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: aae:aq_311  protein-L-isoaspartate O-methyltransferase
YP_002121023.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aae:aq_1363 acetyl-CoA carboxylase biotin carboxyl carrier protein
YP_002121024.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002121025.1	PFAM: protein of unknown function DUF815; KEGG: gur:Gura_2054 protein of unknown function DUF815
YP_002121026.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_002121027.1	TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: aae:aq_1257 methionyl-tRNA synthetase alpha subunit
YP_002121028.1	KEGG: cpy:Cphy_3203 hypothetical protein
YP_002121029.1	PFAM: protein of unknown function DUF503; KEGG: sul:SYO3AOP1_0859 protein of unknown function DUF503
YP_002121030.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sul:SYO3AOP1_0957 TPR repeat-containing protein
YP_002121031.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_002121032.1	KEGG: aae:aq_1811 thioredoxin
YP_002121033.1	PFAM: protein of unknown function DUF140; KEGG: aae:aq_355  ABC transport system permease protein
YP_002121034.1	KEGG: tdn:Tmden_1128 hypothetical protein
YP_002121035.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_2356 protein of unknown function DUF6, transmembrane
YP_002121036.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: aae:aq_1069 UDP-glucose-4-epimerase
YP_002121037.1	KEGG: aae:aq_1138 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_002121038.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002121039.1	PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: aae:aq_980 DNA gyrase A subunit
YP_002121040.1	KEGG: aae:aq_298 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_002121041.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_002121042.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: aae:aq_534 ADP-ribosylglycohydrolase
YP_002121043.1	functions in MreBCD complex in some organisms
YP_002121044.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_002121045.1	KEGG: tpd:Teth39_1450 hypothetical protein
YP_002121046.1	KEGG: aae:aq_1189 penicillin binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_002121047.1	PFAM: electron transport protein SCO1/SenC; KEGG: aae:aq_988 hypothetical protein
YP_002121049.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sul:SYO3AOP1_1480 two component transcriptional regulator, winged helix family
YP_002121050.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pmo:Pmob_0869 histidine kinase
YP_002121051.1	PFAM: protein of unknown function UPF0118; KEGG: aae:aq_740 hypothetical protein
YP_002121052.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: aae:aq_1815  GTP-binding protein
YP_002121053.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002121054.1	PFAM: peptidase M50; KEGG: aae:aq_1853 hypothetical protein
YP_002121055.1	PFAM: protein of unknown function DUF164; KEGG: aae:aq_1223 hypothetical protein
YP_002121056.1	PFAM: Radical SAM domain protein; KEGG: aae:aq_1861 [pyruvate formate-lyase] activating enzyme
YP_002121057.1	PFAM: thioesterase superfamily protein; KEGG: sul:SYO3AOP1_1702 thioesterase superfamily protein
YP_002121058.1	PFAM: chemotaxis sensory transducer; KEGG: ppr:PBPRB1868 hypothetical chemotaxis transducer
YP_002121059.1	PFAM: beta-lactamase domain protein; KEGG: fno:Fnod_0356 beta-lactamase domain protein
YP_002121060.1	KEGG: cbk:CLL_A3034 hypothetical protein
YP_002121061.1	PFAM: Radical SAM domain protein; KEGG: abu:Abu_0826 hypothetical protein
YP_002121062.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: pho:PH0483 chemotaxis-specific methylesterase
YP_002121063.1	KEGG: aae:aq_2195 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_002121064.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: sul:SYO3AOP1_0206 lipopolysaccharide transport periplasmic protein LptA
YP_002121065.1	PFAM: protein of unknown function DUF1239; KEGG: aae:aq_2172  protein
YP_002121066.1	KEGG: sul:SYO3AOP1_0809 iron-sulfur cluster-binding protein
YP_002121067.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_1370 MotA/TolQ/ExbB proton channel
YP_002121068.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sul:SYO3AOP1_1369 biopolymer transport protein ExbD/TolR
YP_002121069.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sul:SYO3AOP1_1368 TonB family protein
YP_002121070.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: sul:SYO3AOP1_1302 nitrogen-fixing NifU domain protein
YP_002121071.1	KEGG: aae:aq_900  protein
YP_002121072.1	PFAM: SirA family protein; KEGG: sul:SYO3AOP1_1300 SirA family protein
YP_002121073.1	KEGG: sul:SYO3AOP1_1299 thiamine biosynthesis protein
YP_002121074.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: aae:aq_896 NifU protein
YP_002121075.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_002121076.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: aae:aq_768 hypothetical protein
YP_002121077.1	KEGG: sul:SYO3AOP1_1219 hypothetical protein
YP_002121078.1	TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: aae:aq_1866 aspartate-semialdehyde dehydrogenase
YP_002121079.1	KEGG: sul:SYO3AOP1_0749 hypothetical protein
YP_002121080.1	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: bce:BC2482 hypothetical cytosolic protein
YP_002121081.1	KEGG: sul:SYO3AOP1_0714 hypothetical protein
YP_002121082.1	KEGG: aae:aq_923 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase
YP_002121083.1	KEGG: afw:Anae109_3615 hypothetical protein
YP_002121084.1	KEGG: aae:aq_629 chromosome assembly protein homolog
YP_002121085.1	KEGG: sul:SYO3AOP1_1438 DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_002121086.1	PFAM: SurA domain; KEGG: aae:aq_1694 hypothetical peptidylprolyl isomerase
YP_002121087.1	PFAM: CBS domain containing protein; KEGG: aae:aq_040 hypothetical protein
YP_002121088.1	KEGG: sul:SYO3AOP1_1161 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_002121089.1	PFAM: protein of unknown function DUF72; KEGG: aae:aq_1408 hypothetical protein
YP_002121090.1	KEGG: sul:SYO3AOP1_1394 hypothetical protein
YP_002121091.1	KEGG: aae:aq_288 hypothetical gluconokinase
YP_002121092.1	PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_437 NADH dehydrogenase I chain G
YP_002121093.1	KEGG: aae:aq_1580 orotidine-5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_002121094.1	PFAM: protein of unknown function DUF86; KEGG: aae:aq_1668 hypothetical protein
YP_002121095.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002121096.1	KEGG: aae:aq_1343 hypothetical protein
YP_002121097.1	PFAM: aminotransferase class I and II; KEGG: aae:aq_1969 aspartate aminotransferase
YP_002121098.1	PFAM: sugar fermentation stimulation protein; KEGG: aae:aq_057 sugar fermentation stimulation protein
YP_002121099.1	KEGG: tva:TVAG_355490 viral A-type inclusion protein,  Pfam: ASD2 Myosin_tail_1 TBPIP BRE1 OmpH DMPK_coil HR1 DUF904    Rad50_zn_hook Exonuc_VII_S Prefoldin_2 Snf7 CDC37_N ATG16 BAR    Rab5-bind bZIP_1 EzrA DUF593 TPR_MLP1_2 FlaC_arch Laminin_I    Prefoldin GBP_C PspA_IM30 KNOX2 Tropomyosin Macscav_rec    DUF1978 Spectrin Cob_adeno_trans Prp19 SMC_Nse1 Apolipoprotein Filament CHASE3 Baculo_PEP_C DREPP HALZ Vicilin_N GRIP PROSITE: ASN_RICH GLU_RICH
YP_002121100.1	PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1199 glycosyl transferase group 1
YP_002121101.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: aae:aq_2058 2-acylglycerophosphoethanolamine acyltransferase
YP_002121102.1	PFAM: protein of unknown function UPF0126; KEGG: sul:SYO3AOP1_0167 protein of unknown function UPF0126
YP_002121103.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_002121104.1	KEGG: aae:aq_1155 ATP phosphoribosyltransferase regulatory subunit
YP_002121105.1	PFAM: Organic solvent tolerance protein; KEGG: aae:aq_967 organic solvent tolerance protein
YP_002121106.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; KEGG: aae:aq_966  4-nitrophenylphosphatase
YP_002121107.1	KEGG: ehi:EHI_049640 phospholipid-transporting P-type ATPase
YP_002121108.1	KEGG: tdn:Tmden_0906 protein of unknown function DUF465
YP_002121109.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: aae:aq_1398 3-isopropylmalate dehydratase small subunit
YP_002121110.1	KEGG: aae:aq_1907 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_002121111.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: aae:aq_773 hemolysin
YP_002121112.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: aae:aq_624 penicillin binding protein 1A
YP_002121113.1	TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: aae:aq_181 imidazoleglycerol-phosphate synthase cyclase
YP_002121114.1	PFAM: membrane-flanked domain; KEGG: cau:Caur_2925 membrane-flanked domain
YP_002121115.1	PFAM: protein of unknown function DUF474; KEGG: sul:SYO3AOP1_1279 protein of unknown function DUF474
YP_002121116.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002121117.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002121118.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sul:SYO3AOP1_1690 single-strand binding protein
YP_002121119.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_002121120.1	KEGG: afu:AF0301 hypothetical protein
YP_002121121.1	PFAM: PilT protein domain protein; KEGG: pab:PAB0786 hypothetical protein
YP_002121122.1	PFAM: protein of unknown function DUF214; KEGG: aae:aq_1585 ABC transporter, permease protein
YP_002121123.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_417 ABC transporter
YP_002121124.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sul:SYO3AOP1_0747 membrane protein involved in aromatic hydrocarbon degradation
YP_002121125.1	SMART: Rhodanese domain protein; KEGG: sul:SYO3AOP1_1272 rhodanese domain protein
YP_002121126.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sul:SYO3AOP1_0932 arsenical pump membrane protein
YP_002121127.1	KEGG: tdn:Tmden_1057 hypothetical protein
YP_002121128.1	KEGG: aae:aq_1134 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein
YP_002121129.1	PFAM: ribosomal protein L35; KEGG: aae:aq_792a 50S ribosomal protein L35
YP_002121130.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_002121131.1	SMART: helicase c2; DEAD-like helicases; KEGG: aae:aq_358 ATP-dependent helicase (DinG family)
YP_002121132.1	TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aae:aq_1677 aspartyl-tRNA synthetase
YP_002121134.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: aae:aq_045 Rieske-I iron sulfur protein
YP_002121135.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sul:SYO3AOP1_1077 cytochrome bd ubiquinol oxidase subunit I
YP_002121136.1	KEGG: sul:SYO3AOP1_1076 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_002121137.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: aae:aq_2069 GTP-binding protein
YP_002121138.1	KEGG: aae:aq_1065 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_002121139.1	KEGG: pmo:Pmob_1140 protein of unknown function DUF554
YP_002121140.1	PFAM: histidine triad (HIT) protein; KEGG: aae:aq_141 protein kinase C inhibitor (HIT family)
YP_002121142.1	PFAM: protein of unknown function DUF752; KEGG: aae:aq_1980 hypothetical protein
YP_002121143.1	TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; KEGG: aae:aq_2119 thiamine monophosphate kinase
YP_002121144.1	KEGG: gur:Gura_3306 hypothetical protein
YP_002121145.1	PFAM: beta-lactamase domain protein; KEGG: aae:aq_2135 hypothetical protein
YP_002121147.1	PFAM: protein of unknown function DUF58; KEGG: aae:aq_1508 hypothetical protein
YP_002121148.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aae:aq_1509  oligopeptide transport system permease protein
YP_002121149.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mja:MJ1656 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HpcE)
YP_002121150.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: aae:aq_629 chromosome assembly protein homolog
YP_002121151.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002121152.1	catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis
YP_002121153.1	PFAM: protein of unknown function DUF343; Transcription factor AL2, zinc ribbon domain protein; KEGG: sfu:Sfum_3635 protein of unknown function DUF343
YP_002121154.1	PFAM: FAD linked oxidase domain protein; KEGG: cte:CT0170 hypothetical protein
YP_002121155.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: aae:aq_1919 GTP binding protein Era
YP_002121156.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_002121157.1	KEGG: pca:Pcar_2534 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_002121158.1	PFAM: amino acid-binding ACT domain protein; KEGG: sul:SYO3AOP1_0896 amino acid-binding ACT domain protein
YP_002121159.1	TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: lpc:LPC_3244 fumarate hydratase
YP_002121160.1	PFAM: aminotransferase class-III; KEGG: aae:aq_170 DapA aminotransferase
YP_002121161.1	PFAM: protein of unknown function DUF55; KEGG: sul:SYO3AOP1_0170 protein of unknown function DUF55
YP_002121162.1	KEGG: mja:MJ1644 hypothetical protein
YP_002121163.1	KEGG: csc:Csac_1648 hypothetical protein
YP_002121164.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002121165.1	KEGG: nis:NIS_0741 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_002121166.1	PFAM: protein of unknown function DUF28; KEGG: aae:aq_1575 hypothetical protein
YP_002121167.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: aae:aq_2049 hypothetical protein
YP_002121168.1	PFAM: ExsB family protein; KEGG: dsy:DSY0668 hypothetical protein
YP_002121169.1	KEGG: aae:aq_252  protein
YP_002121170.1	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: aae:aq_138 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
YP_002121171.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_002121172.1	KEGG: rno:684795 hypothetical protein
YP_002121173.1	PFAM: thymidylate synthase complementing protein ThyX; KEGG: sul:SYO3AOP1_0919 thymidylate synthase complementing protein ThyX
YP_002121174.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sul:SYO3AOP1_1671 3-oxoacyl-(acyl-carrier-protein) reductase
YP_002121175.1	carries the fatty acid chain in fatty acid biosynthesis
YP_002121176.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: aae:aq_1717 3-oxoacyl-[acyl-carrier-protein] synthase II
YP_002121177.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: aae:aq_946 RNase III
YP_002121178.1	KEGG: mae:Maeo_0859 N-glycosylase/DNA lyase
YP_002121179.1	KEGG: sul:SYO3AOP1_1345 conserved hypothetical lipoprotein
YP_002121180.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002121181.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_002121182.1	TIGRFAM: dethiobiotin synthase; KEGG: sul:SYO3AOP1_1157 dethiobiotin synthase
YP_002121183.1	KEGG: aae:aq_936 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase
YP_002121184.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002121185.1	KEGG: aeh:Mlg_2741 hypothetical protein
YP_002121186.1	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: aae:aq_813 holo-[acyl-carrier protein] synthase
YP_002121187.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aae:aq_1208 diaminopimelate decarboxylase
YP_002121188.1	PFAM: 4-vinyl reductase 4VR; KEGG: aae:aq_1655 hypothetical protein
YP_002121189.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_002121190.1	PFAM: FAD linked oxidase domain protein; KEGG: aae:aq_1769 D-lactate dehydrogenase
YP_002121191.1	KEGG: mag:amb1922 hypothetical protein
YP_002121192.1	PFAM: type II secretion system protein; KEGG: aae:aq_747 fimbrial assembly protein PilC
YP_002121193.1	KEGG: sah:SaurJH1_1113 bacteriocin-associated integral membrane protein
YP_002121194.1	PFAM: type II and III secretion system protein; KEGG: aae:aq_585 type IV pilus assembly protein PilQ
YP_002121196.1	KEGG: pfa:PFB0375w hypothetical protein
YP_002121198.1	KEGG: tde:TDE2498 metallo-beta-lactamase family protein
YP_002121200.1	KEGG: abu:Abu_1707 site-specific recombinase, phage integrase family
YP_002121202.1	TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpe:Tpen_1455 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
YP_002121203.1	PFAM: aminotransferase class I and II; KEGG: aae:aq_626 8-amino-7-oxononanoate synthase
YP_002121205.1	KEGG: mbn:Mboo_1434 natural resistance-associated macrophage protein
YP_002121206.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aae:aq_481 peptide transport system permease protein
YP_002121207.1	PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; KEGG: aae:aq_1967 DNA polymerase I (PolI)
YP_002121208.1	PFAM: amino acid permease-associated region; KEGG: sul:SYO3AOP1_1274 amino acid permease-associated region
YP_002121209.1	PFAM: acyl-CoA reductase; Aldehyde Dehydrogenase_; KEGG: aae:aq_186 aldehyde dehydrogenase
YP_002121210.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002121211.1	KEGG: tte:TTE1701 hydrogenase 4 subunit D
YP_002121212.1	KEGG: aae:aq_863 hypothetical protein
YP_002121213.1	KEGG: aae:aq_162 folate biosynthesis 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_002121214.1	PFAM: amidohydrolase; KEGG: aae:aq_587 N-ethylammeline chlorohydrolase
YP_002121215.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_002121216.1	KEGG: aae:aq_1466  protein
YP_002121217.1	KEGG: aae:aq_910 DNA replication protein DnaC
YP_002121218.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily
YP_002121219.1	PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: aae:aq_1172 carbamoyl-phosphate synthase large chain
YP_002121220.1	PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: aae:aq_582 anthranilate synthase component I
YP_002121221.1	KEGG: aae:aq_578  serine/threonine protein kinase
YP_002121222.1	PFAM: Sterol-binding domain protein; KEGG: aae:aq_026 hypothetical protein
YP_002121223.1	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: aae:aq_932a phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
YP_002121224.1	KEGG: aae:aq_1105 phosphoribosyl formylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_002121225.1	KEGG: aae:aq_242 Lon protease; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002121226.1	TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: aae:aq_1607 deoxycytidine triphosphate deaminase
YP_002121227.1	PFAM: Lytic transglycosylase catalytic; KEGG: sul:SYO3AOP1_0253 lytic transglycosylase catalytic
YP_002121228.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator
YP_002121229.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002121230.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_835 NADH oxidase
YP_002121231.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_002121232.1	PFAM: aminotransferase class I and II; KEGG: aae:aq_2094  aminotransferase
YP_002121233.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: aae:aq_2095 DnaK suppressor protein
YP_002121234.1	PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_0921 methyl-accepting chemotaxis sensory transducer
YP_002121235.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: aae:aq_540  multiple antibiotic resistance protein
YP_002121237.1	PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_1132 acriflavin resistance protein
YP_002121238.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1133 efflux transporter, RND family, MFP subunit
YP_002121239.1	PFAM: outer membrane efflux protein; KEGG: gme:Gmet_3465 outer membrane efflux protein
YP_002121240.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sul:SYO3AOP1_0933 protein tyrosine phosphatase
YP_002121241.1	PFAM: regulatory protein ArsR; KEGG: aae:aq_1387 transcriptional regulator (ArsR family)
YP_002121242.1	KEGG: tdn:Tmden_1057 hypothetical protein
YP_002121244.1	KEGG: pho:PH1420 hypothetical protein
YP_002121245.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; KEGG: aae:aq_1737 cyclopropane-fatty-acyl-phospholipid synthase
YP_002121246.1	KEGG: sul:SYO3AOP1_1141 hypothetical protein
YP_002121247.1	KEGG: sul:SYO3AOP1_0383 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_002121248.1	PFAM: Chloride channel core; KEGG: cma:Cmaq_0176 chloride channel core
YP_002121249.1	PFAM: protein of unknown function DUF190; KEGG: mae:Maeo_0017 protein of unknown function DUF190
YP_002121250.1	PFAM: protein of unknown function DUF190; KEGG: mac:MA3935 hypothetical protein
YP_002121251.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: aae:aq_449 integral membrane protein possibly involved in chromosome condensation
YP_002121252.1	TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_1360 UDP-N-acetylmuramate-alanine ligase
YP_002121253.1	PFAM: glycosyl transferase family 2; KEGG: sul:SYO3AOP1_0681 glycosyl transferase family 2
YP_002121254.1	PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: aae:aq_1735 chaperone DnaJ
YP_002121255.1	KEGG: csc:Csac_0596 hypothetical protein
YP_002121256.1	PFAM: flagellar P-ring protein; KEGG: aae:aq_1713 flagellar P-ring protein FlgI
YP_002121257.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_1958 hypothetical protein
YP_002121258.1	KEGG: aae:aq_777 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002121259.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: aae:aq_778 hypothetical protein
YP_002121260.1	KEGG: aae:aq_2114 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_002121261.1	KEGG: sul:SYO3AOP1_1064 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase
YP_002121262.1	KEGG: afu:AF0555 hypothetical protein
YP_002121263.1	PFAM: SirA family protein; KEGG: afu:AF0556 hypothetical protein
YP_002121264.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb1817 uncharacterized NAD(FAD)-dependent dehydrogenase
YP_002121265.1	KEGG: sai:Saci_0333 hypothetical protein
YP_002121266.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sul:SYO3AOP1_0432 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_002121268.1	KEGG: aae:aq_2151 twitching mobility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_002121269.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aae:aq_1137 hypothetical protein
YP_002121270.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_002121271.1	Catalyzes the conversion of citrate to isocitrate
YP_002121272.1	PFAM: protein of unknown function DUF100; KEGG: aae:aq_1790 hypothetical protein
YP_002121273.1	KEGG: sul:SYO3AOP1_1489 hypothetical protein
YP_002121275.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aae:aq_1229 transporter (major facilitator family)
YP_002121276.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: aae:aq_1705 UDP-glucose pyrophosphorylase
YP_002121277.1	KEGG: cau:Caur_1161 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_002121279.1	KEGG: aae:aq_920 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; Tetratricopeptide domain protein
YP_002121280.1	PFAM: ferric-uptake regulator; KEGG: pth:PTH_0045 Fe2+/Zn2+ uptake regulation proteins
YP_002121283.1	KEGG: ehi:EHI_173410 mucin-2 precursor
YP_002121284.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aae:aq_529 outer membrane protein c
YP_002121285.1	PFAM: regulatory protein ArsR; KEGG: sul:SYO3AOP1_0374 transcriptional regulator, ArsR family
YP_002121286.1	TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: aae:aq_1916 thioredoxin
YP_002121287.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tte:TTE1881 thioredoxin reductase
YP_002121288.1	PFAM: type IV pilus assembly PilZ; KEGG: aae:aq_1917  protein
YP_002121289.1	PFAM: oxidoreductase domain protein; KEGG: aae:aq_440 hypothetical protein
YP_002121290.1	PFAM: RNA binding S1 domain protein; KEGG: aae:aq_1275 cytoplasmic axial filament protein
YP_002121291.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002121293.1	PFAM: ribonuclease BN; KEGG: aae:aq_453  protein
YP_002121294.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: aae:aq_357a anti sigma factor
YP_002121295.1	PFAM: Chloride channel core; KEGG: pla:Plav_2437 chloride channel core
YP_002121296.1	catalyzes the formation of oxaloacetate from pyruvate
YP_002121297.1	KEGG: aae:aq_1613 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region
YP_002121298.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_0834 MotA/TolQ/ExbB proton channel
YP_002121299.1	PFAM: OmpA/MotB domain protein; KEGG: sul:SYO3AOP1_0835 OmpA/MotB domain protein
YP_002121300.1	KEGG: aae:aq_594 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002121301.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aae:aq_1300 outer membrane protein
YP_002121302.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_002121303.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sul:SYO3AOP1_1757 nucleotide sugar dehydrogenase
YP_002121304.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: aae:aq_133 transcription termination NusB
YP_002121305.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: aae:aq_1771 uroporphyrinogen-III synthase
YP_002121306.1	PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: aae:aq_1772 UDP-3-0-acyl N-acetylglcosamine deacetylase
YP_002121307.1	KEGG: aae:aq_2093 thiol:disulfide interchange protein
YP_002121308.1	PFAM: histone deacetylase superfamily; KEGG: aae:aq_1023 acetoin utilization protein
YP_002121309.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: aae:aq_490 transcriptional regulator (Crp/Fnr family)
YP_002121310.1	TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: aae:aq_236 GMP synthase
YP_002121311.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_002121312.1	TIGRFAM: DNA ligase D, 3'-phosphoesterase domain protein; KEGG: mma:MM_0209 hypothetical protein
YP_002121313.1	PFAM: flagellar motor switch protein FliG; KEGG: aae:aq_653 flagellar switch protein FliG
YP_002121314.1	KEGG: mja:MJ1643 chromosome segretation protein (smc1)
YP_002121315.1	KEGG: aae:aq_1595 flagellar export protein; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase
YP_002121316.1	KEGG: aae:aq_1858 flagellar hook assembly protein
YP_002121317.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: nis:NIS_0628 flagellar basal body and hook protein FlgE
YP_002121318.1	PFAM: flagellar basal body-associated protein FliL; KEGG: aae:aq_1860 flagellar biosynthesis FliL
YP_002121320.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_002121321.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: aae:aq_1962 flagellar biosynthesis protein FliQ
YP_002121322.1	PFAM: type III secretion system inner membrane R protein; KEGG: aae:aq_1961 flagellar biosynthetic protein FliR
YP_002121323.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: aae:aq_2014 flagellar biosynthetic protein FlhB
YP_002121324.1	PFAM: Radical SAM domain protein; KEGG: aae:aq_2035 hypothetical protein
YP_002121325.1	PFAM: ribonuclease H; KEGG: nis:NIS_0214 ribonuclease HI
YP_002121330.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_26720 tetratricopeptide protein
YP_002121331.1	KEGG: sul:SYO3AOP1_0642 polyferredoxin-like protein
YP_002121332.1	KEGG: sul:SYO3AOP1_1110 hypothetical protein
YP_002121333.1	PFAM: glycosyl transferase family 9; KEGG: aae:aq_1543 ADP-heptose:LPS heptosyltransferase
YP_002121334.1	KEGG: aae:aq_1106a molybdopterin converting factor, small subunit
YP_002121335.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002121336.1	KEGG: dps:DP0721 hypothetical protein
YP_002121337.1	PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aae:aq_1672 ATPase subunit of ATP-dependent protease
YP_002121338.1	PFAM: peptidase U32; KEGG: sul:SYO3AOP1_1234 peptidase U32
YP_002121339.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002121340.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: aae:aq_326 3-deoxy-D-manno-2-octulosonic acid transferase (KDO transferase)
YP_002121341.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: aae:aq_1763 myo-inositol-1-phosphate synthase
YP_002121342.1	KEGG: aae:aq_1985 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_002121343.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sul:SYO3AOP1_0213 GTP-binding protein TypA
YP_002121344.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002121345.1	TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: aae:aq_871 thiophene and furan oxidation protein
YP_002121346.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aae:aq_1857 hypothetical protein
YP_002121347.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: aae:aq_1952 hypothetical protein
YP_002121348.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1482 hypothetical protein
YP_002121349.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: sul:SYO3AOP1_1584 transcriptional regulator, AsnC family
YP_002121350.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_002121351.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_002121352.1	KEGG: gme:Gmet_0456 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like
YP_002121354.1	KEGG: mar:MAE_46380 hypothetical protein
YP_002121355.1	PFAM: Integrase catalytic region; KEGG: sul:SYO3AOP1_1393 integrase catalytic region
YP_002121356.1	KEGG: aae:aq_801 sialoglycoprotease; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_002121357.1	KEGG: aae:aq_797 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002121358.1	KEGG: aae:aq_796  protein
YP_002121359.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_3608 general substrate transporter
YP_002121360.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: sul:SYO3AOP1_1139 phospholipid/glycerol acyltransferase
YP_002121361.1	KEGG: sul:SYO3AOP1_1140 deacetylase-like protein
YP_002121362.1	PFAM: glycosyl transferase group 1; KEGG: glo:Glov_0604 glycosyl transferase group 1
YP_002121363.1	PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1145 glycosyl transferase group 1
YP_002121364.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aoe:Clos_0999 diguanylate cyclase/phosphodiesterase
YP_002121365.1	KEGG: tte:TTE1908 hypothetical protein
YP_002121367.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sul:SYO3AOP1_0734 TonB-dependent receptor
YP_002121368.1	PFAM: DNA polymerase subunit beta; KEGG: glo:Glov_3039 DNA polymerase subunit beta
YP_002121369.1	PFAM: protein of unknown function DUF86; KEGG: gur:Gura_4166 protein of unknown function DUF86
YP_002121370.1	PFAM: TonB-dependent receptor; KEGG: acr:Acry_0295 TonB-dependent receptor
YP_002121371.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_0735 MotA/TolQ/ExbB proton channel
YP_002121372.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sul:SYO3AOP1_0736 biopolymer transport protein ExbD/TolR
YP_002121373.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sul:SYO3AOP1_0737 TonB family protein
YP_002121374.1	PFAM: phosphoesterase; KEGG: sus:Acid_4558 40-residue YVTN family beta-propeller repeat protein
YP_002121377.1	KEGG: sul:SYO3AOP1_1342 hypothetical protein
YP_002121379.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_1344 heavy metal translocating P-type ATPase
YP_002121380.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_7268 cation efflux system protein CzcD
YP_002121381.1	KEGG: sul:SYO3AOP1_1138 hypothetical protein
YP_002121382.1	KEGG: gur:Gura_1227 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit
YP_002121383.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gur:Gura_1226 K+-transporting ATPase, B subunit
YP_002121384.1	PFAM: K transporting ATPase KdpC subunit; KEGG: mca:MCA2215 K+-transporting ATPase, C subunit
YP_002121385.1	PFAM: Osmosensitive K channel His kinase sensor; KEGG: gme:Gmet_2436 osmosensitive K+ channel signal transduction histidine kinase
YP_002121389.1	KEGG: pho:PH1798 chromosome assembly protein
YP_002121390.1	KEGG: bcm:Bcenmc03_5909 type IVB pilus formation outer membrane protein, R64 PilN family
YP_002121393.1	KEGG: cbf:CLI_1972 bacterial type II secretion system protein F
YP_002121394.1	KEGG: mmu:100040282 similar to GPI-anchored cell surface glycoprotein required for diploid pseudohyphal formation and haploid invasive growth, transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p)
YP_002121395.1	KEGG: xla:779335 E2F transcription factor 7 Pfam: E2F_TDP
YP_002121396.1	KEGG: pfh:PFHG_01528 conserved hypothetical protein
YP_002121397.1	PFAM: type II secretion system protein E; KEGG: aae:aq_745 twitching motility protein PilT
YP_002121399.1	PFAM: SNARE associated Golgi protein; KEGG: aae:aq_2066 hypothetical protein
YP_002121400.1	PFAM: heat shock protein Hsp20; KEGG: aae:aq_1283 small heat shock protein (class I)
YP_002121401.1	PFAM: nitroreductase; KEGG: nis:NIS_1849 NAD(P)H-flavin oxidoreductase
YP_002121402.1	KEGG: aae:aq_1631  protein
YP_002121403.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: aae:aq_1365 hypothetical protein
YP_002121404.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_002121405.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: aae:aq_892 malonyl-CoA:acyl carrier protein transacylase
YP_002121406.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: aae:aq_655 fumarate reductase iron-sulfur protein
YP_002121407.1	KEGG: aae:aq_419 hypothetical protein
YP_002121408.1	PFAM: histidine triad (HIT) protein; KEGG: aae:aq_2159 hypothetical protein
YP_002121409.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002121410.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP
YP_002121411.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aae:aq_1310 NADH dehydrogenase I chain A
YP_002121412.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_002121413.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: aae:aq_1314 NADH dehydrogenase I chain C; chain D
YP_002121414.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: aae:aq_1315 NADH dehydrogenase I chain H
YP_002121415.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_1317 NADH dehydrogenase I chain I
YP_002121416.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: aae:aq_1318 NADH dehydrogenase I chain J
YP_002121417.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aae:aq_1319 NADH dehydrogenase I chain K
YP_002121418.1	KEGG: aae:aq_1379 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase subunit 5 domain protein
YP_002121419.1	KEGG: aae:aq_1382 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002121420.1	KEGG: aae:aq_1383 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002121421.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aae:aq_1385 NADH dehydrogenase I chain A
YP_002121422.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: aae:aq_551 NADH dehydrogenase I chain C ; chain D
YP_002121423.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sul:SYO3AOP1_0881 NADH dehydrogenase (quinone)
YP_002121424.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_1375 NADH dehydrogenase I chain I
YP_002121425.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: aae:aq_1377 NADH dehydrogenase I chain J
YP_002121426.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aae:aq_1378 NADH dehydrogenase I chain K
YP_002121427.1	KEGG: aae:aq_1320 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase subunit 5 domain protein
YP_002121428.1	KEGG: aae:aq_1321 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002121429.1	KEGG: aae:aq_1322 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002121430.1	KEGG: sul:SYO3AOP1_0874 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region
YP_002121431.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: aae:aq_183a RNA polymerase omega chain
YP_002121432.1	PFAM: peptidase M16 domain protein; KEGG: aae:aq_1271 processing protease
YP_002121433.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: sul:SYO3AOP1_0851 beta-lactamase domain protein
YP_002121435.1	KEGG: mar:MAE_45070 hypothetical protein
YP_002121437.1	PFAM: SMC domain protein; KEGG: aae:aq_1006 exonuclease SbcC
YP_002121438.1	PFAM: Rhodanese domain protein; KEGG: aae:aq_477 hypothetical protein
YP_002121439.1	KEGG: aae:aq_476 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase
YP_002121440.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: aae:aq_305 isoleucyl-tRNA synthetase
YP_002121441.1	KEGG: aae:aq_271  protein
YP_002121442.1	KEGG: aae:aq_1656 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_002121443.1	KEGG: dre:100003536 hypothetical protein LOC100003536
YP_002121444.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1470 biotin carboxylase
YP_002121445.1	KEGG: aae:aq_166 pyrroline carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_002121446.1	PFAM: SMC domain protein; KEGG: aae:aq_561 recombination protein RecN
YP_002121447.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aae:aq_1331 cation efflux system (CzcB-like)
YP_002121448.1	PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_0349 acriflavin resistance protein
YP_002121449.1	PFAM: ribosomal L11 methyltransferase; KEGG: aae:aq_2102 50S ribosomal protein L11 methyltransferase
YP_002121450.1	PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine-binding; KEGG: aae:aq_999 long-chain-fatty-acid CoA ligase
YP_002121451.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_002121452.1	KEGG: aae:aq_1152 aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_002121453.1	PFAM: PfkB domain protein; KEGG: aae:aq_565 ADP-heptose synthase
YP_002121455.1	PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_1614 outer membrane efflux protein
YP_002121456.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1613 efflux transporter, RND family, MFP subunit
YP_002121457.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_1612 acriflavin resistance protein
YP_002121458.1	KEGG: mbn:Mboo_1434 natural resistance-associated macrophage protein
YP_002121459.1	PFAM: Carbohydrate-selective porin OprB; KEGG: sus:Acid_2724 carbohydrate-selective porin OprB
YP_002121460.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily
YP_002121461.1	KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase
YP_002121462.1	PFAM: glycosyl transferase family 39; KEGG: aae:aq_1695a hypothetical protein
YP_002121463.1	PFAM: 17 kDa surface antigen; TraT complement resistance family protein; KEGG: eba:p1B335 TraT complement resistance protein precursor
YP_002121464.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: aae:aq_1303 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_002121465.1	TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: aae:aq_816 glutamate-1-semialdehyde aminotransferase
YP_002121467.1	PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; KEGG: tko:TK1809 4-alpha-glucanotransferase, GH57 family
YP_002121468.1	KEGG: aae:aq_1501 hypothetical protein
YP_002121469.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sul:SYO3AOP1_0746 histidine kinase
YP_002121470.1	heat shock protein involved in degradation of misfolded proteins
YP_002121471.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: aae:aq_1254 preprotein translocase YajC subunit
YP_002121472.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aae:aq_121 hypothetical protein
YP_002121473.1	PFAM: histone family protein DNA-binding protein; KEGG: aae:aq_2174 integration host factor beta subunit
YP_002121474.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_002121475.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_648 hypothetical protein
YP_002121476.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: tpd:Teth39_2110 modification methylase, HemK family
YP_002121477.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: aae:aq_098 protein export membrane protein SecG
YP_002121478.1	catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A
YP_002121479.1	PFAM: chemotaxis sensory transducer; KEGG: cbk:CLL_A0061 methyl-accepting chemotaxis sensory transducer
YP_002121480.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
YP_002121481.1	KEGG: aae:aq_806 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_002121482.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: ecv:APECO1_2045  regulatory protein
YP_002121483.1	KEGG: aae:aq_1770 leucyl-tRNA synthetase beta subunit
YP_002121484.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator
YP_002121486.1	KEGG: sul:SYO3AOP1_0611 hypothetical protein
YP_002121487.1	PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sul:SYO3AOP1_0159 cytochrome c oxidase mono-heme subunit/FixO
YP_002121488.1	PFAM: cytochrome c oxidase subunit I; KEGG: sul:SYO3AOP1_0160 cytochrome-c oxidase
YP_002121489.1	PFAM: cytochrome c class I; KEGG: sul:SYO3AOP1_0161 cytochrome c class I
YP_002121490.1	KEGG: aae:aq_1663 flagellar hook associated protein FlgL
YP_002121491.1	PFAM: protein of unknown function DUF1078 domain protein; KEGG: aae:aq_1662 flagellar hook associated protein FlgK
YP_002121493.1	PFAM: DNA polymerase III delta; KEGG: sul:SYO3AOP1_0179 DNA polymerase III delta subunit
YP_002121494.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: aae:aq_445 acetyl-CoA carboxylase carboxyl transferase subunit beta
YP_002121495.1	KEGG: aae:aq_2132 pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase
YP_002121496.1	KEGG: sul:SYO3AOP1_1395 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_002121497.1	KEGG: aae:aq_291 magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002121498.1	KEGG: aae:aq_589 mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_002121499.1	PFAM: protein of unknown function DUF43; KEGG: aae:aq_1754 hypothetical protein
YP_002121500.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_002121501.1	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: aae:aq_2171  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
YP_002121502.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sul:SYO3AOP1_0314 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
YP_002121503.1	TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sul:SYO3AOP1_0393 mammalian cell entry related domain protein
YP_002121504.1	KEGG: zmo:ZMO0352 hypothetical protein
YP_002121505.1	PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: aae:aq_1774 glutamate ammonia ligase adenylyl-transferase
YP_002121506.1	PFAM: thioesterase superfamily protein; KEGG: aae:aq_1494 hypothetical protein
YP_002121507.1	PFAM: ferric-uptake regulator; KEGG: aae:aq_1418 transcriptional regulator (FurR family)
YP_002121508.1	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: aae:aq_202 HAM1 protein
YP_002121510.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: acl:ACL_1204 thioredoxin reductase
YP_002121511.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator
YP_002121512.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002121513.1	PFAM: regulatory protein TetR; KEGG: sfu:Sfum_1401 transcriptional regulator, TetR family
YP_002121514.1	PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_1380 outer membrane efflux protein
YP_002121515.1	PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_1379 secretion protein HlyD family protein
YP_002121516.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_002121517.1	PFAM: CinA domain protein; KEGG: aae:aq_1996 competence/damage-inducible protein CinA C-terminal domain
YP_002121518.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: aae:aq_556 penicillin binding protein 2
YP_002121520.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aae:aq_1875 S-adenosyl-methyltransferase
YP_002121521.1	PFAM: histone deacetylase superfamily; KEGG: aae:aq_2110 acetoin utilization protein
YP_002121522.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_002121523.1	KEGG: aae:aq_2138  biotin biosynthesis protein
YP_002121524.1	PFAM: chaperonin Cpn10; KEGG: aae:aq_2199 GroES
YP_002121525.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002121526.1	PFAM: glycosyl transferase family 39; KEGG: aae:aq_1220  protein
YP_002121527.1	KEGG: blo:BL1148 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002121528.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_002121529.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aae:aq_1857 hypothetical protein
YP_002121531.1	PFAM: protein of unknown function DUF185; KEGG: aae:aq_622 hypothetical protein
YP_002121532.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_567 ribosomal-protein-alanine acetyltransferase
YP_002121533.1	KEGG: aae:aq_1570  protein
YP_002121534.1	PFAM: flagellar protein FliS; KEGG: aae:aq_2002 flagellar protein FliS
YP_002121535.1	KEGG: aae:aq_2001 flagellar hook associated protein FliD
YP_002121536.1	PFAM: flagellar protein FlaG protein; KEGG: sul:SYO3AOP1_0993 flagellar protein FlaG protein
YP_002121537.1	PFAM: endodeoxyribonuclease RusA; KEGG: aae:aq_1953  crossover junction endodeoxyribonuclease rus
YP_002121538.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_002121539.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: fnu:FN0902 5-formyltetrahydrofolate cyclo-ligase
YP_002121540.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_002121541.1	KEGG: sul:SYO3AOP1_1464 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002121542.1	TIGRFAM: ATP synthase F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; KEGG: aae:aq_179 ATP synthase F0 subunit a
YP_002121543.1	KEGG: aae:aq_178  protein
YP_002121544.1	TIGRFAM: ATP synthase F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; KEGG: sul:SYO3AOP1_0972 ATP synthase F0 subunit C
YP_002121545.1	PFAM: protein of unknown function DUF37; KEGG: aae:aq_175a hypothetical protein
YP_002121546.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: aae:aq_175  60kDa inner-membrane protein
YP_002121547.1	KEGG: aae:aq_592 hypothetical protein
YP_002121548.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate
YP_002121549.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: aae:aq_968 ribulose-5-phosphate 3-epimerase
YP_002121550.1	PFAM: aminotransferase class I and II; KEGG: aae:aq_421 aminotransferase (AspC family)
YP_002121551.1	TIGRFAM: spermidine synthase; PFAM: Spermine synthase; Methyltransferase type 12; KEGG: aae:aq_062 spermidine synthase
YP_002121553.1	PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: aae:aq_282 endonuclease III
YP_002121554.1	PFAM: Na+/solute symporter; KEGG: tvo:TVN1300 Na+/panthothenate symporter permease
YP_002121555.1	KEGG: sto:STS092 hypothetical protein
YP_002121556.1	PFAM: histidinol dehydrogenase; KEGG: aae:aq_782 histidinol dehydrogenase
YP_002121557.1	KEGG: aae:aq_780  protein
YP_002121558.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: aae:aq_1898 methylenetetrahydrofolate dehydrogenase/ methenyltetrahydrofolate cyclohydrolase
YP_002121559.1	KEGG: aae:aq_633 DNA ligase (NAD dependent); TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_002121560.1	KEGG: tva:TVAG_139760 viral A-type inclusion protein,  Pfam: Myosin_tail_1 Pox_A_type_inc TBPIP bZIP_Maf Filament ATG16    Rab5-bind Laminin_I DUF904 Microtub_assoc CDC37_N Syntaxin    HalX Spectrin BRE1 Prefoldin_2 PROSITE: GLU_RICH
YP_002121561.1	PFAM: Domain of unknown function DUF1791; KEGG: cpf:CPF_0093 hypothetical protein
YP_002121562.1	KEGG: sto:ST2368 hypothetical protein
YP_002121563.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pol:Bpro_3715  ferredoxin
YP_002121564.1	PFAM: Rubrerythrin; KEGG: sto:ST2370 hypothetical rubrerythrin
YP_002121565.1	KEGG: bca:BCE_A0224 lumazine binding domain protein
YP_002121566.1	KEGG: nis:NIS_1089 hypothetical protein
YP_002121567.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aae:aq_418 general secretion pathway protein G
YP_002121568.1	KEGG: cbk:CLL_A3296 prokaryotic N-methylation motif domain protein
YP_002121569.1	KEGG: aae:aq_2118 hypothetical protein
YP_002121570.1	KEGG: ddi:DDB_0231216 IRE family protein kinase
YP_002121571.1	PFAM: cell wall hydrolase/autolysin; KEGG: aae:aq_1681 N-acetylmuramoyl-L-alanine amidase
YP_002121572.1	KEGG: aae:aq_1682 hypothetical protein
YP_002121573.1	PFAM: type II secretion system protein E; KEGG: ttj:TTHA0364 type IV pilus assembly protein PilF
YP_002121574.1	KEGG: fnu:FN0992 ADP-heptose:LPS heptosyltransferase II
YP_002121575.1	KEGG: rno:502541 loricrin
YP_002121576.1	KEGG: mar:MAE_57710 hypothetical protein
YP_002121577.1	PFAM: Polyprenyl synthetase; KEGG: aae:aq_895 octoprenyl-diphosphate synthase
YP_002121578.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aae:aq_101 hemolysin
YP_002121579.1	KEGG: cph:Cpha266_2705 hypothetical protein
YP_002121580.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0936 TtrB
YP_002121581.1	PFAM: Polysulphide reductase NrfD; KEGG: wsu:WS0937 hypothetical protein
YP_002121582.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: wsu:WS0938 TtrA
YP_002121583.1	PFAM: polysaccharide deacetylase; KEGG: sul:SYO3AOP1_1196 polysaccharide deacetylase
YP_002121584.1	PFAM: protein of unknown function DUF81; KEGG: tpd:Teth39_0912 protein of unknown function DUF81
YP_002121585.1	KEGG: tex:Teth514_1974 amino acid transporter-like protein
YP_002121587.1	KEGG: aae:aq_1625 hypothetical protein
YP_002121588.1	KEGG: sul:SYO3AOP1_0138 hypothetical protein
YP_002121589.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: aae:aq_1622 succinyl-CoA synthetase alpha chain
YP_002121590.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_002121591.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sul:SYO3AOP1_0368 cold-shock DNA-binding domain protein
YP_002121592.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: sul:SYO3AOP1_1511 tRNA pseudouridine synthase B
YP_002121593.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; Sigma-70 region 4 type 2; KEGG: aae:aq_1452 RNA polymerase sigma factor
YP_002121594.1	KEGG: aae:aq_1450 periplasmic serine protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_002121595.1	PFAM: Methyltransferase type 11; KEGG: aae:aq_2139 hypothetical protein
YP_002121596.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: aae:aq_1638 lipoate-protein ligase A
YP_002121597.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_002121598.1	PFAM: protein of unknown function DUF52; KEGG: aae:aq_890 hypothetical protein
YP_002121599.1	KEGG: aae:aq_1484 hypothetical gluconokinase
YP_002121600.1	PFAM: nitrogen regulatory protein P-II; KEGG: aae:aq_109 nitrogen regulatory PII protein
YP_002121601.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mth:MTH663 ammonium transporter
YP_002121602.1	KEGG: met:M446_4547 hypothetical protein
YP_002121603.1	KEGG: maq:Maqu_2792 diguanylate phosphodiesterase
YP_002121604.1	KEGG: aae:aq_1862 hypothetical protein
YP_002121605.1	TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: wsu:WS1811 molybdenum-pterin-binding protein
YP_002121606.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sul:SYO3AOP1_0252 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_002121607.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hpy:HP0474 molybdenum ABC transporter, permease protein (ModB)
YP_002121608.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cjj:CJJ81176_0322 molybdenum ABC transporter, ATP-binding protein
YP_002121609.1	TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB
YP_002121610.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mca:MCA0205 ferredoxin, 4Fe-4S
YP_002121611.1	PFAM: nitrogen fixation protein NifW; KEGG: zmo:ZMO1836 nitrogenase stabilizing/protective protein
YP_002121612.1	PFAM: NifZ family protein; KEGG: hha:Hhal_0277 NifZ family protein
YP_002121614.1	TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: ckl:CKL_3642 predicted nicotinate-nucleotide diphosphorylase
YP_002121615.1	KEGG: hmo:HM1_1325 hypothetical protein
YP_002121616.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: aae:aq_410 carbamoyl-phosphate synthase small chain
YP_002121617.1	PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1863 multidrug-efflux transporter
YP_002121618.1	KEGG: csa:Csal_2511 hypothetical protein
YP_002121619.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_002121620.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_002121621.1	PFAM: glucose inhibited division protein; KEGG: aae:aq_1582 glucose inhibited division protein B
YP_002121622.1	PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002121623.1	PFAM: NLP/P60 protein; KEGG: sul:SYO3AOP1_0828 NLP/P60 protein
YP_002121624.1	KEGG: rpt:Rpal_4871 TonB-dependent receptor
YP_002121625.1	KEGG: aae:aq_1862 hypothetical protein
YP_002121627.1	KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002121628.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002121629.1	PFAM: protein of unknown function DUF218; KEGG: sul:SYO3AOP1_1020 protein of unknown function DUF218
YP_002121630.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aae:aq_1987 hypothetical protein
YP_002121631.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: aae:aq_1988 TolQ homolog
YP_002121632.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_1989 hypothetical protein
YP_002121633.1	PFAM: Phosphoglycerate mutase; KEGG: aae:aq_1990 phosphoglycerate mutase
YP_002121634.1	PFAM: aminotransferase class V; KEGG: sul:SYO3AOP1_1504 aminotransferase class V
YP_002121635.1	PFAM: nucleoside diphosphate kinase; KEGG: aae:aq_1590 nucleoside diphosphate kinase
YP_002121636.1	PFAM: HhH-GPD family protein; KEGG: aae:aq_172 endonuclease III
YP_002121637.1	KEGG: sul:SYO3AOP1_0793 FlhB domain protein
YP_002121638.1	KEGG: aae:aq_388  protein
YP_002121639.1	KEGG: aae:aq_852 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_002121640.1	KEGG: aae:aq_2203  protein
YP_002121641.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tdn:Tmden_1219 short chain dehydrogenase
YP_002121642.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aae:aq_206 nitrite reductase (NAD(P)H) large subunit
YP_002121643.1	PFAM: ribosomal protein L31; KEGG: aae:aq_873a ribosomal protein L31
YP_002121644.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_002121646.1	PFAM: protein of unknown function DUF202; KEGG: aae:aq_913 hypothetical protein
YP_002121647.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_002121648.1	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aae:aq_1218 RNA polymerase sigma factor
YP_002121649.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily
YP_002121652.1	KEGG: aae:aq_1286 hypothetical protein
YP_002121653.1	PFAM: CoA-binding domain protein; KEGG: aae:aq_1869 hypothetical protein
YP_002121654.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_002121655.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: aae:aq_501 phosphomannomutase
YP_002121656.1	PFAM: protein of unknown function DUF88; KEGG: aae:aq_200 hypothetical protein
YP_002121657.1	KEGG: ptr:460193 similar to TPRXL protein
YP_002121658.1	KEGG: aae:aq_880 hypothetical protein
YP_002121659.1	KEGG: sul:SYO3AOP1_0959 hypothetical protein
YP_002121660.1	KEGG: sul:SYO3AOP1_0958 peptidase C39 bacteriocin processing
YP_002121661.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_002121662.1	KEGG: aae:aq_975 biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_002121663.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aae:aq_903 hypothetical protein
YP_002121664.1	PFAM: protein of unknown function UPF0047; KEGG: aae:aq_1965 hypothetical protein
YP_002121665.1	KEGG: aae:aq_1964 hypothetical zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_002121666.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_002121667.1	PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_1563 multidrug resistance protein
YP_002121668.1	KEGG: aae:aq_408 hypothetical protein
YP_002121669.1	KEGG: aae:aq_1879 N-acetyl-gamma-glutamylphosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_002121670.1	forms a direct contact with the tRNA during translation
YP_002121671.1	PFAM: ribosomal protein L13; KEGG: aae:aq_1877 50S ribosomal protein L13
YP_002121672.1	KEGG: aae:aq_1827 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_002121674.1	PFAM: protein of unknown function DUF1009; KEGG: aae:aq_1276 hypothetical protein
YP_002121675.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE1017 sensory transduction histidine kinase
YP_002121676.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_002121678.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002121679.1	TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: aae:aq_1588 ATP synthase F1 delta chain
YP_002121680.1	KEGG: aae:aq_1587 ATP synthase F0 subunit B
YP_002121681.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: aae:aq_1586 ATP synthase F0 subunit B
YP_002121682.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002121683.1	KEGG: aae:aq_2046 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein
YP_002121685.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002121686.1	KEGG: vfi:VF1884 hypothetical protein
YP_002121687.1	PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: aae:aq_245 phosphoribosylaminoimidazole carboxylase ATPase subunit
YP_002121688.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_002121689.1	KEGG: sul:SYO3AOP1_0631 hypothetical protein
YP_002121690.1	KEGG: sul:SYO3AOP1_1151 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit
YP_002121691.1	PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; KEGG: mse:Msed_0839 DNA topoisomerase, type IA, central domain protein
YP_002121692.1	KEGG: aae:aq_1873  protein
YP_002121694.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: aae:aq_1871 peptide maturation
YP_002121695.1	KEGG: afu:AF1464 hypothetical protein
YP_002121696.1	KEGG: aae:aq_615  protein
YP_002121697.1	PFAM: Lytic transglycosylase catalytic; KEGG: aae:aq_1579 invasion protein IagB
YP_002121698.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_854 hypothetical protein
YP_002121699.1	PFAM: UspA domain protein; KEGG: aae:aq_855 hypothetical protein
YP_002121700.1	PFAM: inositol monophosphatase; KEGG: aae:aq_1983 myo-inositol-1(or 4)-monophosphatase
YP_002121701.1	PFAM: class II aldolase/adducin family protein; KEGG: aae:aq_1658 fuculose-1-phosphate aldolase
YP_002121702.1	TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: aae:aq_052 4-hydroxybenzoate octaprenyltransferase
YP_002121703.1	PFAM: shikimate kinase; KEGG: aae:aq_2177 shikimate kinase
YP_002121704.1	KEGG: aae:aq_420  protein
YP_002121705.1	PFAM: protein of unknown function DUF81; KEGG: aae:aq_127 hypothetical protein
YP_002121706.1	PFAM: Sporulation domain protein; KEGG: cyt:cce_0608 hypothetical protein
YP_002121707.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002121708.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002121709.1	PFAM: ribonuclease HII/HIII; KEGG: sul:SYO3AOP1_0189 ribonuclease H
YP_002121710.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002121711.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:PflO1_1664 C4-dicarboxylate transporter/malic acid transport protein
YP_002121712.1	KEGG: aae:aq_1739 LytB protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein
YP_002121713.1	TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aae:aq_2043 cytochrome c biogenesis protein
YP_002121714.1	KEGG: aae:aq_869 quinolinate phosphoribosyl transferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_002121715.1	PFAM: histone family protein DNA-binding protein; KEGG: gme:Gmet_0355 histone-like DNA-binding protein
YP_002121716.1	KEGG: aae:aq_272  protein
YP_002121717.1	PFAM: ribosomal RNA adenine methylase transferase; KEGG: aae:aq_1816 dimethyladenosine transferase
YP_002121718.1	TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: aae:aq_1495 O-6-methylguanine-DNA-alkyltransferase
YP_002121719.1	KEGG: aae:aq_1862 hypothetical protein
YP_002121720.1	TIGRFAM: leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase class I (M); KEGG: aae:aq_351 leucyl-tRNA synthetase alpha subunit
YP_002121721.1	TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: sul:SYO3AOP1_1101 DJ-1 family protein
YP_002121723.1	KEGG: aae:aq_1192a ferredoxin
YP_002121725.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002121726.1	SMART: protein phosphatase 2C domain protein; KEGG: aae:aq_575 hypothetical protein
YP_002121727.1	PFAM: Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aae:aq_576 ser/thr protein kinase
YP_002121728.1	KEGG: aae:aq_749 pseudouridine synthase I; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase
YP_002121729.1	KEGG: mma:MM_3109 glycogen phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_002121730.1	KEGG: aae:aq_2093 thiol:disulfide interchange protein
YP_002121731.1	PFAM: glycosyl transferase family 9; KEGG: aae:aq_145 ADP-heptose:LPS heptosyltransferase
YP_002121732.1	KEGG: aae:aq_142  protein
YP_002121733.1	TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_2064 glutamate synthase (NADPH) small chain
YP_002121734.1	KEGG: aae:aq_2098 hypothetical protein
YP_002121735.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_403 hypothetical protein
YP_002121736.1	PFAM: protein of unknown function DUF1291; KEGG: sai:Saci_1075 hypothetical protein
YP_002121737.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_002121738.1	PFAM: DsrE family protein; KEGG: aae:aq_401 hypothetical protein
YP_002121739.1	KEGG: mbu:Mbur_0102 hypothetical protein
YP_002121740.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_002121741.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aae:aq_400 heterodisulfide reductase subunit B
YP_002121742.1	KEGG: aae:aq_398 heterodisulfide reductase subunit C
YP_002121743.1	KEGG: aae:aq_397 hypothetical protein
YP_002121744.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_395 heterodisulfide reductase subunit A
YP_002121745.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sso:SSO1129 Heterodisulfite reductase, subunit B (HdrB-1)
YP_002121746.1	KEGG: aae:aq_391 hypothetical protein
YP_002121747.1	KEGG: aae:aq_390 hypothetical protein
YP_002121748.1	KEGG: aae:aq_389 hypothetical protein
YP_002121749.1	PFAM: SirA family protein; KEGG: rma:Rmag_0225 SirA family protein
YP_002121750.1	PFAM: protein of unknown function DUF507; KEGG: aae:aq_1752 hypothetical protein
YP_002121751.1	TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: aae:aq_673 ATP synthase F1 epsilon subunit
YP_002121752.1	KEGG: aae:aq_1882 DNA polymerase III beta chain; TIGRFAM: DNA polymerase III beta subunit; PFAM: DNA polymerase III beta chain
YP_002121753.1	PFAM: conserved hypothetical protein; KEGG: aae:aq_1884 hypothetical protein
YP_002121754.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: aae:aq_1886 ATP-dependent dsDNA exonuclease
YP_002121755.1	PFAM: band 7 protein; KEGG: dra:DR_2143 hypothetical protein
YP_002121756.1	PFAM: protein of unknown function DUF107; KEGG: abc:ACICU_03009 membrane protein
YP_002121757.1	PFAM: dienelactone hydrolase; KEGG: rba:RB5825 probable dienelactone hydrolase
YP_002121758.1	PFAM: protein of unknown function DUF488; KEGG: sso:SSO1867 hypothetical protein
YP_002121759.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1359 hypothetical protein
YP_002121760.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aae:aq_635 hypothetical protein
YP_002121761.1	PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1197 glycosyl transferase group 1
YP_002121762.1	KEGG: pfh:PFHG_04642 conserved hypothetical protein
YP_002121763.1	PFAM: protein of unknown function DUF77; KEGG: aae:aq_2067 hypothetical protein
YP_002121764.1	KEGG: aae:aq_853 6-pyruvoyl tetrahydrobiopterin synthase
YP_002121766.1	PFAM: YicC domain protein; KEGG: sul:SYO3AOP1_1469 domain of unknown function DUF1732
YP_002121767.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_002121768.1	KEGG: nis:NIS_0600 hypothetical protein
YP_002121770.1	PFAM: cell cycle protein; KEGG: aae:aq_025 rod shape determining protein RodA
YP_002121771.1	PFAM: phosphatidate cytidylyltransferase; KEGG: aae:aq_1249 phosphatidate cytidylyltransferase
YP_002121772.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sul:SYO3AOP1_0641 tol-pal system protein YbgF
YP_002121773.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_002121774.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aae:aq_270 prolipoprotein diacylglyceryl transferase
YP_002121775.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: sgr:SGR_4259  D-alanyl-D-alanine carboxypeptidase
YP_002121777.1	KEGG: ath:AT4G11980 ATNUDT14 (Arabidopsis thaliana Nudix hydrolase homolog 14); hydrolase
YP_002121778.1	TIGRFAM: TonB family protein; KEGG: aae:aq_1982  protein
YP_002121779.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: aae:aq_1603 hypothetical protein
YP_002121780.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aae:aq_973 protein export membrane protein SecD
YP_002121781.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: aae:aq_1601 leader peptidase (prepilin peptidase) / N-methyltransferase
YP_002121782.1	KEGG: tcx:Tcr_1973 twin-arginine translocation protein TatB
YP_002121783.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: aae:aq_1267  sec-independant protein translocase
YP_002121784.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: aae:aq_2101 carbamoyl-phosphate synthase large chain
YP_002121785.1	KEGG: sul:SYO3AOP1_1000 hypothetical protein
YP_002121787.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: cps:CPS_2411 hypothetical protein
YP_002121789.1	KEGG: amr:AM1_2734 hypothetical protein
YP_002121790.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: zmo:ZMO0137 hypothetical protein
YP_002121792.1	KEGG: cch:Cag_0368 hypothetical protein
YP_002121793.1	PFAM: ribosomal protein S20; KEGG: aae:aq_1767 30S ribosomal protein S20
YP_002121794.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: aae:aq_711  protein
YP_002121795.1	KEGG: sul:SYO3AOP1_0856 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_002121796.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aae:aq_866 NADH dehydrogenase I chain L
YP_002121797.1	KEGG: cvi:CV_3609 hypothetical protein
YP_002121798.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_002121799.1	PFAM: helix-turn-helix HxlR type; KEGG: npu:Npun_R3268 transcriptional regulator, HxlR family
YP_002121800.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Allinase-like; KEGG: sul:SYO3AOP1_1771 histidinol-phosphate aminotransferase
YP_002121801.1	KEGG: aae:aq_1178 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_002121803.1	KEGG: saz:Sama_3121 hypothetical protein
YP_002121804.1	KEGG: dps:DP0107 similar to signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_002121805.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sul:SYO3AOP1_0582 molybdenum cofactor synthesis domain protein
YP_002121806.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: pla:Plav_3289 thiamine biosynthesis protein ThiS
YP_002121807.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_002121808.1	KEGG: aae:aq_2015 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase
YP_002121809.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aae:aq_1457  ubiquinone/menaquinone biosynthesis methlytransferase ubiE
YP_002121810.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: cbe:Cbei_2840 extradiol ring-cleavage dioxygenase, class III protein, subunit B
YP_002121811.1	PFAM: DNA polymerase subunit beta; KEGG: nis:NIS_1265 hypothetical protein
YP_002121812.1	KEGG: aae:aq_1273  lipoprotein
YP_002121813.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aae:aq_1272 hypothetical protein
YP_002121814.1	KEGG: aae:aq_1558 hypothetical protein
YP_002121815.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lsp:Bsph_2783 response regulator ArlR
YP_002121816.1	KEGG: aae:aq_1242 DNA mismatch repair protein MutS; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein
YP_002121817.1	PFAM: MscS Mechanosensitive ion channel; KEGG: ana:alr1196 hypothetical protein
YP_002121818.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3788  transmembrane oxidoreductase protein
YP_002121819.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pnu:Pnuc_0325 hypothetical protein
YP_002121820.1	KEGG: aae:aq_1236 hypothetical protein
YP_002121821.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aae:aq_1792 transcriptional regulator (NtrC family)
YP_002121822.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sul:SYO3AOP1_1528 glycerol-3-phosphate dehydrogenase (NAD(P)(+))
YP_002121823.1	PFAM: NLP/P60 protein; KEGG: gme:Gmet_1169 NLP/P60:peptidoglycan-binding LysM
YP_002121824.1	KEGG: ava:Ava_2455 ErfK/YbiS/YcfS/YnhG
YP_002121825.1	KEGG: aae:aq_957 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_002121826.1	PFAM: Patatin; KEGG: aae:aq_1386 hypothetical protein
YP_002121827.1	PFAM: cytochrome c class I; KEGG: rfr:Rfer_2468 cytochrome c, class I
YP_002121828.1	KEGG: aae:aq_1450 periplasmic serine protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_002121829.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_002121830.1	KEGG: aae:aq_194  protein
YP_002121831.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aae:aq_1639 oxido/reductase iron sulfur protein
YP_002121832.1	PFAM: protein of unknown function DUF191; KEGG: aae:aq_313 hypothetical protein
YP_002121833.1	KEGG: aae:aq_1369  protein
YP_002121834.1	PFAM: phosphatidylglycerophosphatase A; KEGG: aae:aq_314 phosphatidylglycerophosphatase A
YP_002121835.1	KEGG: sul:SYO3AOP1_0767 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002121837.1	PFAM: thiamine monophosphate synthase; KEGG: aae:aq_1366 thiamine phosphate synthase
YP_002121838.1	TIGRFAM: transposase ; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sul:SYO3AOP1_0092 transposase
YP_002121839.1	KEGG: aae:aq_374 hypothetical protein
YP_002121840.1	PFAM: protein of unknown function UPF0150; KEGG: ana:asl2437 hypothetical protein
YP_002121841.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: aae:aq_1473  protein
YP_002121842.1	KEGG: aae:aq_1465  protein
YP_002121843.1	KEGG: aae:aq_1843 hypothetical protein
YP_002121844.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_002121845.1	PFAM: extracellular solute-binding protein family 5; KEGG: aae:aq_1441 peptide transport system substrate-binding protein
YP_002121846.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: aae:aq_2090 2-isopropylmalate synthase
YP_002121847.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: aae:aq_901 shikimate 5-dehydrogenase
YP_002121848.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_002121849.1	KEGG: aae:aq_054  protein
YP_002121850.1	PFAM: protein of unknown function DUF205; KEGG: aae:aq_676 hypothetical protein
YP_002121851.1	SMART: phospholipase D/Transphosphatidylase; KEGG: kcr:Kcr_0268 phospholipase D/transphosphatidylase
YP_002121852.1	KEGG: aae:aq_742 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201
YP_002121853.1	KEGG: sul:SYO3AOP1_1058 hypothetical protein
YP_002121854.1	PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_407 hypothetical protein
YP_002121855.1	PFAM: type IV pilus assembly PilZ; KEGG: gme:Gmet_0191 hypothetical protein
YP_002121856.1	PFAM: type IV pilus assembly PilZ
YP_002121857.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_002121858.1	PFAM: protein of unknown function DUF88; KEGG: aae:aq_430 hypothetical protein
YP_002121859.1	PFAM: GrpE protein; KEGG: aae:aq_433 heat shock protein GrpE
YP_002121860.1	KEGG: aae:aq_2080 proteinase IV; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_002121861.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: aae:aq_1787 indole-3-glycerol phosphate synthase
YP_002121862.1	PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aae:aq_1997 hypothetical carboxymethylenebutenolidase
YP_002121863.1	KEGG: aae:aq_334 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_002121864.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: sul:SYO3AOP1_1476  signal transduction protein
YP_002121865.1	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: aae:aq_1851 acetolactate synthase small subunit
YP_002121866.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: aae:aq_451 acetolactate synthase large subunit
YP_002121867.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: aae:aq_356 2-isopropylmalate synthase
YP_002121868.1	PFAM: creatinase; peptidase M24; KEGG: aae:aq_1535 Xaa-Pro dipeptidase
YP_002121869.1	PFAM: regulatory protein LacI; sigma-54 DNA-binding domain protein; KEGG: aae:aq_599 RNA polymerase sigma factor
YP_002121870.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: aae:aq_1565 glutamate synthase (NADPH) large chain
YP_002121871.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; KEGG: aae:aq_651 hypothetical protein
YP_002121873.1	PFAM: protein of unknown function DUF156; KEGG: amt:Amet_0044 protein of unknown function DUF156
YP_002121874.1	KEGG: gfo:GFO_1324 membrane protein containing heavy metal transport/detoxification domain
YP_002121875.1	PFAM: Heavy metal transport/detoxification protein; KEGG: ttj:TTHA1718 heavy metal binding protein
YP_002121876.1	TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sag:SAG2023 mercuric reductase
YP_002121877.1	TIGRFAM: valyl-tRNA synthetase; KEGG: sul:SYO3AOP1_1334 valyl-tRNA synthetase
YP_002121878.1	PFAM: Peptidase M23; KEGG: aae:aq_652 lipoprotein
YP_002121881.1	KEGG: mbr:MONBRDRAFT_13061 hypothetical protein PROSITE: SER_RICH THR_RICH
YP_002121883.1	KEGG: gme:Gmet_0839 lipoprotein
YP_002121884.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: dol:Dole_2900 peptidase C14 caspase catalytic subunit P20
YP_002121886.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: cbf:CLI_1224 tetratricopeptide repeat family protein
YP_002121887.1	PFAM: protein of unknown function UPF0005; KEGG: cff:CFF8240_1784 hypothetical protein
YP_002121888.1	Dimethylates a single guanine residue of a number of tRNAs using S-adenosyl-L-methionine as a methyl group donor
YP_002121889.1	PFAM: polysaccharide deacetylase; KEGG: sul:SYO3AOP1_1756 polysaccharide deacetylase
YP_002121890.1	PFAM: ribonucleotide reductase; KEGG: hsl:OE4345R ribonucleoside-diphosphate reductase beta subunit
YP_002121891.1	KEGG: aae:aq_1842  protein
YP_002121892.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_002121893.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: sul:SYO3AOP1_1308 RNA chaperone Hfq
YP_002121894.1	TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: aae:aq_1908 GTP-binding protein HflX
YP_002121895.1	KEGG: aae:aq_1909  protein
YP_002121896.1	PFAM: aldo/keto reductase; KEGG: aae:aq_323 hypothetical protein
YP_002121897.1	PFAM: type II secretion system protein; KEGG: aae:aq_1285 fimbrial assembly protein PilC2
YP_002121898.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aae:aq_270 prolipoprotein diacylglyceryl transferase
YP_002121899.1	SMART: Mov34/MPN/PAD-1 family protein; KEGG: aae:aq_1691 hypothetical protein
YP_002121900.1	KEGG: aae:aq_263 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_002121901.1	KEGG: aae:aq_993 hypothetical protein
YP_002121902.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; KEGG: aae:aq_2060 Mg-dependent DNase
YP_002121903.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_002121905.1	KEGG: mmi:MMAR_2272 PE-PGRS family protein
YP_002121906.1	PFAM: Polyprenyl synthetase; KEGG: aae:aq_748 geranylgeranyl pyrophosphate synthase
YP_002121907.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits
YP_002121909.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002121910.1	PFAM: ATP-binding region ATPase domain protein; KEGG: sul:SYO3AOP1_1478 histidine kinase
YP_002121911.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sul:SYO3AOP1_1480 two component transcriptional regulator, winged helix family
YP_002121912.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_002121913.1	PFAM: ribosome recycling factor; KEGG: aae:aq_712 ribosome recycling factor
YP_002121914.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: aae:aq_108b host factor I
YP_002121915.1	KEGG: aae:aq_1248 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_002121916.1	PFAM: enolase; KEGG: aae:aq_484 enolase
YP_002121919.1	TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: aae:aq_1836 phosphoribosylformylglycinamidine synthase II
YP_002121920.1	TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: aae:aq_1837 lipoprotein signal peptidase
YP_002121921.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: aae:aq_2076 phosphoribosyl anthranilate isomerase
YP_002121922.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: aae:aq_857 phosphoribosylglycinamide formyltransferase
YP_002121923.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_002121924.1	KEGG: aae:aq_243  protein
YP_002121925.1	PFAM: Thioredoxin domain; KEGG: pmi:PMT9312_0244 thioredoxin-like protein TxlA
YP_002121926.1	catalyzes branch migration in Holliday junction intermediates
YP_002121927.1	KEGG: sul:SYO3AOP1_1462 hypothetical protein
YP_002121928.1	PFAM: small multidrug resistance protein; KEGG: tle:Tlet_1278 small multidrug resistance protein
YP_002121929.1	PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: aae:aq_1888 succinyl-CoA synthetase alpha chain
YP_002121930.1	PFAM: ATP-grasp domain protein; KEGG: aae:aq_1306 succinyl-CoA synthetase beta chain
YP_002121931.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aae:aq_319 transcriptional regulator (PhoB-like)
YP_002121932.1	TIGRFAM: 16S rRNA processing protein RimM; KEGG: trq:TRQ2_1231 16S rRNA processing protein RimM
YP_002121933.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: aae:aq_1612 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_002121934.1	PFAM: flagellin domain protein; KEGG: nis:NIS_0640 flagellin
YP_002121935.1	KEGG: sul:SYO3AOP1_1316 hypothetical protein
YP_002121936.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: cytidylyltransferase; FAD synthetase; Riboflavin kinase; KEGG: aae:aq_139 riboflavin kinase / FMN adenylyltransferase
YP_002121937.1	Catalyzes the phosphorylation of UMP to UDP
YP_002121938.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002121939.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002121940.1	KEGG: sul:SYO3AOP1_1012 fimbrial protein
YP_002121941.1	KEGG: pfa:PFL2540w hypothetical protein
YP_002121942.1	TIGRFAM: transposase, IS605 OrfB family; KEGG: sul:SYO3AOP1_0342 transposase
YP_002121943.1	KEGG: sul:SYO3AOP1_0522 hypothetical protein
YP_002121944.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_002121945.1	KEGG: tpt:Tpet_1595 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_002121946.1	KEGG: trq:TRQ2_1662 6-phosphogluconolactonase
YP_002121947.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_1896 hypothetical protein
YP_002121948.1	KEGG: nis:NIS_1167 hypothetical protein
YP_002121949.1	KEGG: aae:aq_401 hypothetical protein
YP_002121950.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_002121951.1	KEGG: aae:aq_2063  protein
YP_002121952.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: aae:aq_269 6-pyruvoyl tetrahydrobiopterin synthase
YP_002121953.1	KEGG: sul:SYO3AOP1_0947 hypothetical protein
YP_002121954.1	KEGG: sul:SYO3AOP1_0948 hypothetical protein
YP_002121955.1	KEGG: sul:SYO3AOP1_0949 hypothetical protein
YP_002121956.1	PFAM: SirA family protein; KEGG: sul:SYO3AOP1_0950 SirA family protein
YP_002121957.1	KEGG: ppd:Ppro_0262 ATPase
YP_002121958.1	KEGG: aae:aq_1010 dehydrogenase
YP_002121959.1	KEGG: aae:aq_325 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_002121961.1	PFAM: helix-turn-helix domain protein; KEGG: pfo:PflO1_0204 transcriptional regulator, XRE family
YP_002121962.1	PFAM: HipA domain protein; KEGG: cch:Cag_1275 hypothetical protein
YP_002121964.1	KEGG: mxa:MXAN_1841 hypothetical protein
YP_002121965.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: sul:SYO3AOP1_0698 NADH ubiquinone oxidoreductase 20 kDa subunit
YP_002121966.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: sul:SYO3AOP1_0699 NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_002121967.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sul:SYO3AOP1_0700 NADH dehydrogenase (quinone)
YP_002121968.1	KEGG: sul:SYO3AOP1_0701 hydrogenase 4 membrane component (E)
YP_002121969.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sul:SYO3AOP1_0702 respiratory-chain NADH dehydrogenase subunit 1
YP_002121970.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sul:SYO3AOP1_0703 NADH dehydrogenase (quinone)
YP_002121971.1	KEGG: cmi:CMM_2429 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein
YP_002121972.1	PFAM: glycosyl transferase family 2; KEGG: sul:SYO3AOP1_0309 glycosyl transferase family 2
YP_002121973.1	heat shock protein involved in degradation of misfolded proteins
YP_002121974.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: aae:aq_1765 transketolase
YP_002121977.1	SMART: Rhodanese domain protein; KEGG: tac:Ta0643 hypothetical protein
YP_002121978.1	PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: sul:SYO3AOP1_1134 rubrerythrin
YP_002121979.1	PFAM: Linocin_M18 bacteriocin protein; KEGG: sul:SYO3AOP1_0119 Linocin_M18 bacteriocin protein
YP_002121980.1	PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002121982.1	KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein
YP_002121983.1	KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
YP_002121984.1	KEGG: aae:aq_1545  protein
YP_002121985.1	PFAM: nitroreductase; KEGG: tpd:Teth39_0911 nitroreductase
YP_002121986.1	KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002121987.1	PFAM: TQO small subunit DoxD; KEGG: bth:BT_0515 terminal quinol oxidase, subunit, (DoxD-like)
YP_002121989.1	PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_2 repeat protein; KEGG: aae:aq_1796 hypothetical protein
YP_002121990.1	PFAM: von Willebrand factor type A; KEGG: aae:aq_345 hypothetical protein
YP_002121992.1	PFAM: chemotaxis sensory transducer; KEGG: nis:NIS_0600 hypothetical protein
YP_002121993.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aae:aq_104 hypothetical protein
YP_002121994.1	PFAM: ribosome-binding factor A; KEGG: lin:lin1364 ribosome-binding factor A
YP_002121995.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: aae:aq_164 transcriptional regulator (NtrC family)
YP_002121997.1	KEGG: aae:aq_1855 DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_002121998.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: aae:aq_038 3-hydroxyisobutyrate dehydrogenase
YP_002121999.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: aae:aq_2155 single-strand-DNA-specific exonuclease RecJ
YP_002122000.1	KEGG: aae:aq_2157  protein
YP_002122001.1	PFAM: Chorismate binding-like; KEGG: aae:aq_1144 para-aminobenzoate synthetase component I
YP_002122002.1	PFAM: aminotransferase class IV; KEGG: aae:aq_1606 aminodeoxychorismate lyase
YP_002122003.1	KEGG: aae:aq_350 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase); TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_002122004.1	PFAM: conserved hypothetical protein; KEGG: aae:aq_818 hypothetical protein
YP_002122005.1	TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aae:aq_819 apolipoprotein N-acyltransferase
YP_002122006.1	KEGG: aae:aq_737 Mrp protein
YP_002122007.1	PFAM: aminotransferase class V; KEGG: aae:aq_739 FeS cluster formation protein NifS
YP_002122008.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aae:aq_638 transcriptional regulator (LysR family)
YP_002122009.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sul:SYO3AOP1_1352 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_002122010.1	PFAM: heat shock protein DnaJ domain protein; KEGG: sul:SYO3AOP1_0928 heat shock protein DnaJ domain protein
YP_002122011.1	PFAM: CheW domain protein; KEGG: sul:SYO3AOP1_0927 chemotaxis protein CheW
YP_002122012.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2137  ABC transport system ATP-binding protein
YP_002122013.1	KEGG: aae:aq_904 hypothetical protein
YP_002122014.1	KEGG: aae:aq_1324  protein
YP_002122015.1	TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: sul:SYO3AOP1_0551 cell division topological specificity factor MinE
YP_002122016.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aae:aq_877 septum site-determining protein MinD
YP_002122017.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: aae:aq_878 septum site-determining protein MinC
YP_002122018.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aae:aq_338 ubiquinone/menaquinone biosynthesis methyltransferase
YP_002122019.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_002122020.1	KEGG: pin:Ping_0273 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002122021.1	PFAM: ATPase; KEGG: cbd:CBUD_0184 archaeal ATPase family protein
YP_002122022.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sul:SYO3AOP1_0009 peptidase U62 modulator of DNA gyrase
YP_002122023.1	KEGG: aae:aq_1680  protein
YP_002122024.1	KEGG: aae:aq_844 (p)ppGpp 3-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_002122025.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_821 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase
YP_002122026.1	PFAM: glycine cleavage H-protein; KEGG: aae:aq_1108 glycine cleavage system protein H
YP_002122027.1	KEGG: sul:SYO3AOP1_1534 outer membrane lipoprotein carrier protein LolA
YP_002122028.1	KEGG: aae:aq_1891 hypothetical protein
YP_002122029.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_002122030.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aae:aq_1342 phosphoglycolate phosphatase
YP_002122031.1	PFAM: Protein of unknown function methylase KEGG: sul:SYO3AOP1_0182 protein of unknown function methylase
YP_002122032.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
YP_002122033.1	KEGG: aae:aq_1618  protein
YP_002122034.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_002122035.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_002122036.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: aae:aq_2147a glutamyl-tRNA (Gln) amidotransferase subunit C
YP_002122037.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_0133 ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_002122039.1	PFAM: flagellar L-ring protein; KEGG: aae:aq_1714 flagellar L-ring protein FlgH
YP_002122040.1	PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1664 biotin carboxylase
YP_002122041.1	PFAM: protein of unknown function DUF167; KEGG: ana:asl3196 hypothetical protein
YP_002122042.1	KEGG: aae:aq_150 citrate synthase
YP_002122043.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: aae:aq_1329 molybdopterin biosynthesis protein MoeB
YP_002122044.1	KEGG: sul:SYO3AOP1_1630 YD repeat protein
YP_002122045.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aae:aq_1724 transcriptional regulator (DegT/DnrJ/EryC1 family)
YP_002122046.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002122047.1	KEGG: aae:aq_644  protein
YP_002122048.1	PFAM: glycosyl transferase family 2; KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase
YP_002122049.1	KEGG: aae:aq_406 hypothetical protein
YP_002122050.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: cch:Cag_0607 phosphoesterase, PA-phosphatase related
YP_002122051.1	PFAM: acriflavin resistance protein; KEGG: aae:aq_695 cation efflux system (AcrB/AcrD/AcrF family)
YP_002122052.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aae:aq_698 acriflavin resistance protein AcrE
YP_002122053.1	PFAM: outer membrane efflux protein; KEGG: aae:aq_699 hypothetical protein
YP_002122054.1	PFAM: ATP-NAD/AcoX kinase; KEGG: aae:aq_909 probable inorganic polyphosphate/ATP-NAD kinase
YP_002122055.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: aae:aq_416 hypothetical protein
YP_002122056.1	PFAM: glutamine amidotransferase class-I; KEGG: sul:SYO3AOP1_1249 glutamine amidotransferase class-I
YP_002122057.1	KEGG: sul:SYO3AOP1_0566  ferredoxin 2Fe-2S protein
YP_002122058.1	PFAM: Carbohydrate-selective porin OprB; KEGG: sus:Acid_2724 carbohydrate-selective porin OprB
YP_002122059.1	PFAM: high-affinity nickel-transporter; KEGG: yen:YE0959  nickel transport protein
YP_002122060.1	PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: ccv:CCV52592_1897 NikR C nickel binding domain family
YP_002122061.1	PFAM: regulatory protein TetR; KEGG: aae:aq_321 hypothetical protein
YP_002122062.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: aae:aq_802 hydrogenase small chain
YP_002122063.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_804 hydrogenase large chain
YP_002122064.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_002122065.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: pmo:Pmob_0979 anaerobic ribonucleoside-triphosphate reductase activating protein
YP_002122066.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002122068.1	KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002122069.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aae:aq_495 bacterioferritin comigratory protein
YP_002122070.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_789 hypothetical protein
YP_002122072.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_002122073.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein
YP_002122074.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: aae:aq_152 thiol disulfide interchange protein
YP_002122075.1	PFAM: cell division protein FtsA; KEGG: aae:aq_523 cell division protein FtsA
YP_002122076.1	PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: aae:aq_1812 homoserine dehydrogenase
YP_002122077.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002122078.1	PFAM: PhoH family protein; KEGG: aae:aq_1351 phosphate starvation-inducible protein
YP_002122079.1	PFAM: protein of unknown function UPF0054; KEGG: aae:aq_1354 hypothetical protein
YP_002122080.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aae:aq_2073 hypothetical protein
YP_002122081.1	KEGG: aae:aq_632 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002122082.1	SMART: Cystinosin/ERS1p repeat; KEGG: sul:SYO3AOP1_0862 hypothetical protein
YP_002122083.1	KEGG: aae:aq_362 hypothetical protein
YP_002122084.1	PFAM: ROK family protein; KEGG: sfu:Sfum_1953 ROK family protein
YP_002122085.1	KEGG: sul:SYO3AOP1_1572 hypothetical protein
YP_002122086.1	KEGG: sul:SYO3AOP1_0491 hypothetical protein
YP_002122088.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: sul:SYO3AOP1_0490 helicase domain protein
YP_002122089.1	KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein
YP_002122091.1	PFAM: FeoA family protein
YP_002122092.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: aae:aq_1255 ferrous iron transport protein B
YP_002122094.1	PFAM: Haem oxygenase-like; KEGG: cyt:cce_2324 heme oxygenase
YP_002122095.1	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: aae:aq_1512 isocitrate dehydrogenase
YP_002122096.1	PFAM: OsmC family protein; KEGG: aae:aq_1515 hypothetical protein
YP_002122097.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1517 pyruvate carboxylase subunit A
YP_002122098.1	catalyzes the formation of oxaloacetate from pyruvate
YP_002122099.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sul:SYO3AOP1_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_002122100.1	TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sul:SYO3AOP1_0617 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
YP_002122101.1	PFAM: pentapeptide repeat protein; KEGG: sul:SYO3AOP1_0707 pentapeptide repeat protein
YP_002122102.1	KEGG: bid:Bind_2816 hypothetical protein
YP_002122103.1	PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; KEGG: aae:aq_1422 hypothetical DNA polymerase / histidinol phosphatase
YP_002122104.1	PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: aae:aq_411 tRNA nucleotidyltransferase (CCA-adding enzyme)
YP_002122105.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sus:Acid_0685 NADH:flavin oxidoreductase/NADH oxidase
YP_002122106.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sul:SYO3AOP1_1602 diguanylate cyclase/phosphodiesterase
YP_002122107.1	KEGG: sul:SYO3AOP1_1604 hypothetical protein
YP_002122108.1	KEGG: sul:SYO3AOP1_1603 hypothetical protein
YP_002122109.1	TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: aae:aq_597 adenylosuccinate lyase
YP_002122110.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_1480  CDPdiacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002122111.1	TIGRFAM: glutaredoxin-like domain protein; KEGG: aae:aq_443 glutaredoxin-like protein
YP_002122112.1	TIGRFAM: hemerythrin-like metal-binding protein; KEGG: sul:SYO3AOP1_1768 hemerythrin-like metal-binding protein
YP_002122113.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: aae:aq_500 thioredoxin reductase
YP_002122114.1	KEGG: aae:aq_250 hypothetical protein
YP_002122115.1	KEGG: aae:aq_247 glutamyl-tRNA (Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase
YP_002122116.1	KEGG: aae:aq_082 hypothetical protein
YP_002122117.1	PFAM: UvrD/REP helicase; KEGG: aae:aq_793 ATP-dependent DNA helicase REP
YP_002122118.1	PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein; KEGG: aae:aq_1863 potassium channel protein
YP_002122119.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_0164 NAD-dependent epimerase/dehydratase
YP_002122120.1	PFAM: protein of unknown function DUF461; KEGG: rpa:RPA2931 DUF461
YP_002122122.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_1684 major facilitator superfamily MFS_1
YP_002122123.1	PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1755 glycosyl transferase group 1
YP_002122124.1	KEGG: aae:aq_1794 hypothetical protein
YP_002122125.1	KEGG: aae:aq_1583  protein
YP_002122126.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_F1823 tetratricopeptide TPR_2 repeat protein
YP_002122127.1	PFAM: UbiA prenyltransferase; KEGG: cdf:CD0982 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
YP_002122128.1	KEGG: aae:aq_1800  protein
YP_002122129.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: aae:aq_1803 sulfur oxidation protein SoxB
YP_002122130.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: aae:aq_1809 hypothetical protein
YP_002122131.1	KEGG: acr:Acry_2479 hypothetical protein
YP_002122132.1	KEGG: aae:aq_1810 hypothetical protein
YP_002122133.1	KEGG: aae:aq_1811 thioredoxin
YP_002122134.1	PFAM: Domain of unknown function DUF1791; KEGG: sul:SYO3AOP1_0504 domain of unknown function DUF1791
YP_002122135.1	KEGG: aae:aq_1862 hypothetical protein
YP_002122136.1	KEGG: sfu:Sfum_1840 hypothetical protein
YP_002122137.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: aae:aq_549 anthranilate synthase component II
YP_002122139.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aoe:Clos_2585 ABC transporter
YP_002122140.1	PFAM: ABC transporter; KEGG: cte:CT0183 ABC-type drug export system, membrane protein
YP_002122142.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_067 dimethylsulfoxide reductase chain B
YP_002122143.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_1747 UDP-MurNac-tripeptide synthetase
YP_002122144.1	KEGG: aae:aq_496 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_002122146.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: aae:aq_1212 flagellar export protein
YP_002122147.1	PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: aae:aq_1214 flagellar biosynthesis FlhF
YP_002122148.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aae:aq_1217 septum site-determining protein MinD
YP_002122149.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: aae:aq_1693 N-terminus of phage SPO1 DNA polymerase
YP_002122150.1	PFAM: PEBP family protein; KEGG: aae:aq_1250 hypothetical protein
YP_002122151.1	PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aae:aq_1296 ATP-dependent Clp protease
YP_002122152.1	PFAM: transglutaminase domain protein; KEGG: sul:SYO3AOP1_1521 transglutaminase domain protein
YP_002122153.1	PFAM: ResB family protein; KEGG: aae:aq_2082 cytochrome c biogenesis protein
YP_002122155.1	KEGG: aae:aq_579 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_002122156.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aae:aq_731 cytochrome c-type biogenesis protein
YP_002122157.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: sul:SYO3AOP1_0967 integral membrane protein MviN
YP_002122158.1	PFAM: Endonuclease V; KEGG: aae:aq_548 hypothetical endonuclease V (deoxyinosine 3'endonuclease)
YP_002122159.1	PFAM: AMMECR1 domain protein; KEGG: aae:aq_1444 hypothetical protein
YP_002122160.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: dar:Daro_3955 filamentation induced by cAMP protein Fic
YP_002122162.1	KEGG: cbf:CLI_1132 hypothetical protein
YP_002122163.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_002122164.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_002122165.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: aae:aq_1706 hypothetical protein
YP_002122166.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: aae:aq_2131 methionyl-tRNA formyltransferase
YP_002122167.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: aae:aq_528 phenylacrylic acid decarboxylase
YP_002122168.1	KEGG: csc:Csac_1889 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_002122170.1	SMART: zinc finger CDGSH-type domain protein; KEGG: mse:Msed_0266 zinc finger, CDGSH-type domain protein
YP_002122171.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aae:aq_728 ornithine decarboxylase
YP_002122172.1	KEGG: aae:aq_682 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_002122173.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aae:aq_1977 enolase-phosphatase E-1
YP_002122174.1	PFAM: Acireductone dioxygenase ARD; KEGG: aae:aq_1975 hypothetical protein
YP_002122175.1	TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: aae:aq_1979 hypothetical protein
YP_002122176.1	KEGG: tet:TTHERM_00163900 Bifunctional endo-1,4-beta-xylanase xylA precursor,  PROSITE: ASN_RICH GLN_RICH
YP_002122177.1	TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_2075 UDP-N-acetylmuramoylalanine-D-glutamate ligase
YP_002122178.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sul:SYO3AOP1_1529 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002122179.1	PFAM: glycosyl transferase family 39; KEGG: aae:aq_765 hypothetical protein
YP_002122180.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aae:aq_050 hypothetical protein
YP_002122181.1	KEGG: aae:aq_1758 hypothetical protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_002122183.1	KEGG: sul:SYO3AOP1_1735 hypothetical protein
YP_002122184.1	KEGG: tte:TTE2487 phosphoglycerate mutase 1; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase
YP_002122185.1	PFAM: SirA family protein; KEGG: sul:SYO3AOP1_1311 SirA family protein
YP_002122186.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: aae:aq_815 pantothenate metabolism flavoprotein
YP_002122187.1	TIGRFAM: transposase, IS605 OrfB family; KEGG: sul:SYO3AOP1_1718 transposase, IS605 OrfB family
YP_002122188.1	PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: aae:aq_1474 general secretion pathway protein E
YP_002122189.1	PFAM: ferredoxin; KEGG: aae:aq_919a ferredoxin
YP_002122190.1	PFAM: peptidase M48 Ste24p; KEGG: aae:aq_1991 probable protease htpX homolog
YP_002122191.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: aae:aq_1490 RNA polymerase sigma factor
YP_002122192.1	KEGG: aae:aq_1493 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_002122193.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: aae:aq_2011 hypothetical protein
YP_002122194.1	TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: aae:aq_045 Rieske-I iron sulfur protein
YP_002122195.1	PFAM: cytochrome b/b6 domain; KEGG: aae:aq_044 ubiquinol-cytochrome c reductase cytochrome b subunit
YP_002122196.1	KEGG: aae:aq_042 ubiquinol-cytochrome c reductase cytochrome c1 subunit
YP_002122197.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002122198.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: sul:SYO3AOP1_1531 dTDP-4-dehydrorhamnose reductase
YP_002122199.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_1390 dTDP-glucose 4,6-dehydratase
YP_002122200.1	KEGG: sul:SYO3AOP1_1389 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_002122201.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sul:SYO3AOP1_1388 glucose-1-phosphate thymidylyltransferase
YP_002122202.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2160 peptide transport system ATP-binding protein
YP_002122203.1	KEGG: sul:SYO3AOP1_1000 hypothetical protein
YP_002122204.1	KEGG: cch:Cag_0368 hypothetical protein
YP_002122205.1	KEGG: cyt:cce_4067 hypothetical protein
YP_002122206.1	TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: syp:SYNPCC7002_A0836 addiction module toxin, Txe/YoeB family
YP_002122207.1	KEGG: sul:SYO3AOP1_1000 hypothetical protein
YP_002122208.1	PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002122209.1	PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1638 lipoate-protein ligase A
YP_002122210.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cac:CAC2328 polysaccharide ABC transporter, ATPase component
YP_002122211.1	PFAM: ABC transporter; KEGG: mxa:MXAN_4623 O-antigen ABC exporter, permease protein
YP_002122212.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: aae:aq_1145 1,3 propanediol dehydrogenase
YP_002122213.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sul:SYO3AOP1_1239 oxidoreductase FAD/NAD(P)-binding domain protein
YP_002122214.1	KEGG: sul:SYO3AOP1_0242 hypothetical protein
YP_002122215.1	PFAM: alanine racemase domain protein; KEGG: aae:aq_274 hypothetical protein
YP_002122216.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: aae:aq_1887 cell cycle protein MesJ
YP_002122217.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_002122218.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: aae:aq_2181 molybdopterin converting factor subunit 2
YP_002122219.1	PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sul:SYO3AOP1_0369 molybdenum cofactor biosynthesis protein A
YP_002122220.1	KEGG: aae:aq_474 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002122222.1	KEGG: sul:SYO3AOP1_0813 hypothetical protein
YP_002122223.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002122224.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_2051 flagellar hook basal-body protein FlgG
YP_002122225.1	KEGG: aae:aq_539  protein
YP_002122226.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_002122227.1	KEGG: sul:SYO3AOP1_0477 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_002122228.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aae:aq_1445 cation transporting ATPase (E1-E2 family)
YP_002122229.1	PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2160 peptide transport system ATP-binding protein
YP_002122230.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sul:SYO3AOP1_1388 glucose-1-phosphate thymidylyltransferase
YP_002122231.1	KEGG: sul:SYO3AOP1_1389 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_002122232.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_1390 dTDP-glucose 4,6-dehydratase
YP_002122233.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis
YP_002122234.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: glo:Glov_1528 hypothetical protein
YP_002122235.1	PFAM: glycosyl transferase family 2; KEGG: cbk:CLL_A3246 WsaE
YP_002122236.1	PFAM: glycosyl transferase family 2; KEGG: pcu:pc0904 probable rhamnosyltransferase
YP_002122237.1	PFAM: glycosyl transferase family 2; KEGG: apa:APP7_1479 glycosyl transferase, group 2 family protein
YP_002122238.1	TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: aae:aq_185 glycerol-3-phosphate cytidyltransferase
YP_002122239.1	PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703
YP_002122240.1	KEGG: bpl:BURPS1106A_A1951 membrane-anchored cell surface protein
YP_002122241.1	PFAM: phosphoesterase RecJ domain protein; KEGG: aae:aq_1630 hypothetical protein
YP_002122242.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_002122243.1	PFAM: molydopterin dinucleotide-binding region; KEGG: aae:aq_116 hypothetical protein
YP_002122244.1	KEGG: aae:aq_1552 enoyl-[acyl-carrier-protein] reductase (NADH)
YP_002122245.1	catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate
YP_002122246.1	KEGG: aae:aq_2141 glycyl-tRNA synthetase beta chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit
YP_002122247.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_002122248.1	PFAM: DNA polymerase subunit beta; KEGG: aae:aq_507 hypothetical protein
YP_002122249.1	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: sul:SYO3AOP1_1773 nucleotidyltransferase substrate binding protein, HI0074 family
YP_002122250.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_2045 folylpolyglutamate synthase / dihydrofolate synthase
YP_002122251.1	KEGG: aae:aq_2158 poly A polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002122252.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_958 phosphotidylglycerophosphate synthase
YP_002122253.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: aae:aq_1175 amidophosphoribosyltransferase
YP_002122254.1	KEGG: mta:Moth_1699 hypothetical protein
YP_002122255.1	PFAM: protein of unknown function DUF354; KEGG: cff:CFF8240_1618 hypothetical protein
YP_002122256.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tdn:Tmden_0186 asparagine synthase, glutamine-hydrolyzing
YP_002122257.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: aae:aq_1005 periplasmic divalent cation tolerance protein
YP_002122260.1	KEGG: aae:aq_805  protein
YP_002122261.1	PFAM: protein of unknown function DUF208; KEGG: aae:aq_701 hypothetical protein
YP_002122262.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_002122263.1	KEGG: aae:aq_581  protein
YP_002122264.1	KEGG: sai:Saci_2119 hypothetical protein
YP_002122265.1	KEGG: sul:SYO3AOP1_1000 hypothetical protein
YP_002122266.1	KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain
YP_002122267.1	TIGRFAM: methyltransferase FkbM family; KEGG: cbk:CLL_A2331  methyltransferase
YP_002122268.1	KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain
YP_002122269.1	KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain
YP_002122270.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_0628 NAD-dependent epimerase/dehydratase
YP_002122271.1	KEGG: aae:aq_1008 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_002122272.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sul:SYO3AOP1_0741 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_002122273.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sul:SYO3AOP1_0742 phosphate ABC transporter, inner membrane subunit PstC
YP_002122274.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sul:SYO3AOP1_0743 phosphate ABC transporter, inner membrane subunit PstA
YP_002122275.1	KEGG: sul:SYO3AOP1_0744 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase
YP_002122276.1	PFAM: Phosphoglycerate mutase; KEGG: aae:aq_1744 phosphoglycerate mutase
YP_002122277.1	KEGG: pho:PH1355.1n hypothetical protein
YP_002122278.1	PFAM: SNARE associated Golgi protein; KEGG: aae:aq_2066 hypothetical protein
YP_002122279.1	PFAM: Prephenate dehydrogenase; KEGG: sul:SYO3AOP1_1358 prephenate dehydrogenase
YP_002122280.1	PFAM: UspA domain protein; KEGG: aae:aq_1024 hypothetical protein
YP_002122281.1	KEGG: aae:aq_1026 gyrase B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_002122282.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_0711 heavy metal translocating P-type ATPase
YP_002122283.1	PFAM: protein of unknown function DUF996; KEGG: mja:MJ1644 hypothetical protein
YP_002122284.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aae:aq_1111 hypothetical protein
YP_002122285.1	PFAM: protein of unknown function DUF150; KEGG: aae:aq_260 hypothetical protein
YP_002122286.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_002122287.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; KEGG: aae:aq_257 RNA methyltransferase
YP_002122288.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_002122289.1	KEGG: dol:Dole_0027 hypothetical protein
YP_002122290.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pha:PSHAb0511 alcohol dehydrogenase, propanol-preferring
YP_002122291.1	KEGG: sul:SYO3AOP1_0325 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_002122292.1	KEGG: aae:aq_1761 hypothetical protein
YP_002122293.1	PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1192 hypothetical protein
YP_002122294.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: aae:aq_1195 pyruvate ferredoxin oxidoreductase, alpha subunit
YP_002122295.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: aae:aq_1196 pyruvate ferredoxin oxidoreductase, beta subunit
YP_002122296.1	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: aae:aq_1200 pyruvate ferredoxin oxidoreductase, gamma subunit
YP_002122297.1	KEGG: sul:SYO3AOP1_1442 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002122298.1	PFAM: protein of unknown function UPF0102; KEGG: sul:SYO3AOP1_0546 protein of unknown function UPF0102
YP_002122299.1	PFAM: protein of unknown function DUF62; KEGG: aae:aq_2196 hypothetical protein