-- dump date 20140619_115310 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002120671.1 195952381 6744473 265..1599 1 NC_011126.1 KEGG: aae:aq_322 chromosome replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; chromosomal replication initiator protein DnaA 1599 6744473 HY04AAS1_0001 Hydrogenobaculum sp. Y04AAS1 chromosomal replication initiator protein DnaA YP_002120671.1 265 D 380749 CDS YP_002120672.1 195952382 6742780 complement(1600..2403) 1 NC_011126.1 PFAM: protein of unknown function DUF81; KEGG: sto:ST2237 hypothetical protein; hypothetical protein 2403 6742780 HY04AAS1_0002 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120672.1 1600 R 380749 CDS YP_002120673.1 195952383 6742781 complement(2400..2750) 1 NC_011126.1 PFAM: t-RNA-binding domain protein; KEGG: aae:aq_422 methionyl-tRNA synthetase beta subunit; t-RNA-binding domain-containing protein 2750 6742781 HY04AAS1_0003 Hydrogenobaculum sp. Y04AAS1 t-RNA-binding domain-containing protein YP_002120673.1 2400 R 380749 CDS YP_002120674.1 195952384 6742782 2810..4258 1 NC_011126.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: cth:Cthe_0282 glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 4258 6742782 HY04AAS1_0004 Hydrogenobaculum sp. Y04AAS1 glycogen/starch synthase YP_002120674.1 2810 D 380749 CDS YP_002120675.1 195952385 6742783 4258..5445 1 NC_011126.1 KEGG: aae:aq_1468 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 5445 6742783 HY04AAS1_0005 Hydrogenobaculum sp. Y04AAS1 dihydropteroate synthase YP_002120675.1 4258 D 380749 CDS YP_002120676.1 195952386 6742784 5438..6184 1 NC_011126.1 PFAM: protein of unknown function DUF147; KEGG: aae:aq_1467 hypothetical protein; hypothetical protein 6184 6742784 HY04AAS1_0006 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120676.1 5438 D 380749 CDS YP_002120677.1 195952387 6742785 complement(6189..7586) 1 NC_011126.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_0310 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT family 7586 6742785 HY04AAS1_0007 Hydrogenobaculum sp. Y04AAS1 RND efflux system, outer membrane lipoprotein, NodT family YP_002120677.1 6189 R 380749 CDS YP_002120678.1 195952388 6742786 complement(7588..8679) 1 NC_011126.1 PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_0311 secretion protein HlyD family protein; secretion protein HlyD family protein 8679 6742786 HY04AAS1_0008 Hydrogenobaculum sp. Y04AAS1 secretion protein HlyD family protein YP_002120678.1 7588 R 380749 CDS YP_002120679.1 195952389 6742787 complement(8758..9465) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sul:SYO3AOP1_0312 ABC transporter; ABC transporter 9465 6742787 HY04AAS1_0009 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002120679.1 8758 R 380749 CDS YP_002120680.1 195952390 6742788 complement(9467..10609) 1 NC_011126.1 PFAM: protein of unknown function DUF214; KEGG: sul:SYO3AOP1_0313 protein of unknown function DUF214; hypothetical protein 10609 6742788 HY04AAS1_0010 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120680.1 9467 R 380749 CDS YP_002120681.1 195952391 6742791 complement(11078..11563) 1 NC_011126.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: aae:aq_1174 rare lipoprotein A; rare lipoprotein A 11563 6742791 HY04AAS1_0011 Hydrogenobaculum sp. Y04AAS1 rare lipoprotein A YP_002120681.1 11078 R 380749 CDS YP_002120682.1 195952392 6742792 11837..12499 1 NC_011126.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: aae:aq_906 phosphate transport system regulatory protein; phosphate uptake regulator PhoU 12499 6742792 HY04AAS1_0012 Hydrogenobaculum sp. Y04AAS1 phosphate uptake regulator PhoU YP_002120682.1 11837 D 380749 CDS YP_002120683.1 195952393 6742793 12459..14255 1 NC_011126.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aae:aq_905 histidine kinase sensor protein; integral membrane sensor signal transduction histidine kinase 14255 6742793 HY04AAS1_0013 Hydrogenobaculum sp. Y04AAS1 integral membrane sensor signal transduction histidine kinase YP_002120683.1 12459 D 380749 CDS YP_002120684.1 195952394 6742794 complement(14245..15384) 1 NC_011126.1 PFAM: major facilitator superfamily MFS_1; KEGG: tpd:Teth39_1328 major facilitator superfamily MFS_1; major facilitator superfamily protein 15384 6742794 HY04AAS1_0014 Hydrogenobaculum sp. Y04AAS1 major facilitator superfamily protein YP_002120684.1 14245 R 380749 CDS YP_002120685.1 195952395 6742795 complement(15381..16352) 1 NC_011126.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 16352 6742795 HY04AAS1_0015 Hydrogenobaculum sp. Y04AAS1 quinolinate synthetase YP_002120685.1 15381 R 380749 CDS YP_002120686.1 195952396 6742796 16463..17401 1 NC_011126.1 KEGG: sul:SYO3AOP1_0239 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 17401 6742796 HY04AAS1_0016 Hydrogenobaculum sp. Y04AAS1 ribose-phosphate pyrophosphokinase YP_002120686.1 16463 D 380749 CDS YP_002120687.1 195952397 6742798 complement(17522..18241) 1 NC_011126.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: aae:aq_1464 pseudouridylate synthase; pseudouridine synthase 18241 6742798 HY04AAS1_0017 Hydrogenobaculum sp. Y04AAS1 pseudouridine synthase YP_002120687.1 17522 R 380749 CDS YP_002120688.1 195952398 6742799 complement(18238..18786) 1 NC_011126.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 18786 folE 6742799 folE Hydrogenobaculum sp. Y04AAS1 GTP cyclohydrolase I YP_002120688.1 18238 R 380749 CDS YP_002120689.1 195952399 6742800 complement(18866..19663) 1 NC_011126.1 KEGG: aae:aq_1973 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 19663 6742800 HY04AAS1_0019 Hydrogenobaculum sp. Y04AAS1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002120689.1 18866 R 380749 CDS YP_002120690.1 195952400 6742801 complement(19653..20780) 1 NC_011126.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 20780 prfB 6742801 prfB Hydrogenobaculum sp. Y04AAS1 peptide chain release factor 2 YP_002120690.1 19653 R 380749 CDS YP_002120691.1 195952401 6742802 complement(20782..20994) 1 NC_011126.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: cth:Cthe_0738 copper ion binding protein; copper ion binding protein 20994 6742802 HY04AAS1_0021 Hydrogenobaculum sp. Y04AAS1 copper ion binding protein YP_002120691.1 20782 R 380749 CDS YP_002120692.1 195952402 6742803 complement(21151..21885) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0342 transposase; hypothetical protein 21885 6742803 HY04AAS1_0022 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120692.1 21151 R 380749 CDS YP_002120693.1 195952403 6742804 22003..23157 1 NC_011126.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 23157 6742804 HY04AAS1_0023 Hydrogenobaculum sp. Y04AAS1 chaperone protein DnaJ YP_002120693.1 22003 D 380749 CDS YP_002120694.1 195952404 6742805 23147..23542 1 NC_011126.1 PFAM: regulatory protein MerR; KEGG: aae:aq_702 transcriptional regulator (MerR family); MerR family transcriptional regulator 23542 6742805 HY04AAS1_0024 Hydrogenobaculum sp. Y04AAS1 MerR family transcriptional regulator YP_002120694.1 23147 D 380749 CDS YP_002120695.1 195952405 6742806 complement(23571..23864) 1 NC_011126.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sul:SYO3AOP1_0812 cupin 2 conserved barrel domain protein; Cupin 2 conserved barrel domain-containing protein 23864 6742806 HY04AAS1_0025 Hydrogenobaculum sp. Y04AAS1 Cupin 2 conserved barrel domain-containing protein YP_002120695.1 23571 R 380749 CDS YP_002120696.1 195952406 6742807 complement(23857..25242) 1 NC_011126.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: aae:aq_607 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 25242 6742807 HY04AAS1_0026 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylglucosamine pyrophosphorylase YP_002120696.1 23857 R 380749 CDS YP_002120697.1 195952407 6742808 complement(25252..26154) 1 NC_011126.1 PFAM: tRNA synthetase class II (D K and N); KEGG: aae:aq_763 lysyl-tRNA synthetase (genX) homolog; tRNA synthetase class II (D K and N) 26154 6742808 HY04AAS1_0027 Hydrogenobaculum sp. Y04AAS1 tRNA synthetase class II (D K and N) YP_002120697.1 25252 R 380749 CDS YP_002120698.1 195952408 6742809 complement(26151..26801) 1 NC_011126.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: aae:aq_831 trans-regulatory protein ExsB; exsB protein 26801 6742809 HY04AAS1_0028 Hydrogenobaculum sp. Y04AAS1 exsB protein YP_002120698.1 26151 R 380749 CDS YP_002120699.1 195952409 6742810 complement(26805..28427) 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: tme:Tmel_1579 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 28427 6742810 HY04AAS1_0029 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002120699.1 26805 R 380749 CDS YP_002120700.1 195952410 6742811 complement(28417..29304) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2671 tetratricopeptide TPR_2; hypothetical protein 29304 6742811 HY04AAS1_0030 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120700.1 28417 R 380749 CDS YP_002120701.1 195952411 6742812 29387..29803 1 NC_011126.1 KEGG: glo:Glov_0518 hypothetical protein; hypothetical protein 29803 6742812 HY04AAS1_0031 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120701.1 29387 D 380749 CDS YP_002120702.1 195952412 6742813 complement(30182..31006) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0346 carboxylesterase; carboxylesterase 31006 6742813 HY04AAS1_0032 Hydrogenobaculum sp. Y04AAS1 carboxylesterase YP_002120702.1 30182 R 380749 CDS YP_002120703.1 195952413 6742814 complement(31008..32369) 1 NC_011126.1 PFAM: aminotransferase class-III; KEGG: sul:SYO3AOP1_0347 aminotransferase class-III; class III aminotransferase 32369 6742814 HY04AAS1_0033 Hydrogenobaculum sp. Y04AAS1 class III aminotransferase YP_002120703.1 31008 R 380749 CDS YP_002120704.1 195952414 6742815 complement(32317..32946) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0348 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 32946 6742815 HY04AAS1_0034 Hydrogenobaculum sp. Y04AAS1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_002120704.1 32317 R 380749 CDS YP_002120705.1 195952415 6742816 complement(33006..33512) 1 NC_011126.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sul:SYO3AOP1_1306 redoxin domain protein; Redoxin domain-containing protein 33512 6742816 HY04AAS1_0035 Hydrogenobaculum sp. Y04AAS1 Redoxin domain-containing protein YP_002120705.1 33006 R 380749 CDS YP_002120706.1 195952416 6742817 complement(33590..34489) 1 NC_011126.1 PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; KEGG: aae:aq_1628 DNA polymerase I 3'-5' exo domain; 5'-3' exonuclease 34489 6742817 HY04AAS1_0036 Hydrogenobaculum sp. Y04AAS1 5'-3' exonuclease YP_002120706.1 33590 R 380749 CDS YP_002120707.1 195952417 6742818 complement(34490..34984) 1 NC_011126.1 PFAM: protein of unknown function DUF151; KEGG: aae:aq_283 hypothetical protein; hypothetical protein 34984 6742818 HY04AAS1_0037 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120707.1 34490 R 380749 CDS YP_002120708.1 195952418 6742819 complement(35103..35372) 1 NC_011126.1 hypothetical protein 35372 6742819 HY04AAS1_0038 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120708.1 35103 R 380749 CDS YP_002120709.1 195952419 6742820 complement(35376..35600) 1 NC_011126.1 KEGG: aae:aq_1171a ferredoxin; ferredoxin 35600 6742820 HY04AAS1_0039 Hydrogenobaculum sp. Y04AAS1 ferredoxin YP_002120709.1 35376 R 380749 CDS YP_002120710.1 195952420 6742821 complement(35611..36291) 1 NC_011126.1 TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: aae:aq_1169 pyruvate ferredoxin oxidoreductase, gamma subunit; pyruvate/ketoisovalerate oxidoreductase subunit gamma 36291 6742821 HY04AAS1_0040 Hydrogenobaculum sp. Y04AAS1 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_002120710.1 35611 R 380749 CDS YP_002120711.1 195952421 6742822 complement(36303..37169) 1 NC_011126.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: aae:aq_1168 pyruvate ferredoxin oxidoreductase, beta subunit; thiamine pyrophosphate TPP binding domain-containing protein 37169 6742822 HY04AAS1_0041 Hydrogenobaculum sp. Y04AAS1 thiamine pyrophosphate TPP binding domain-containing protein YP_002120711.1 36303 R 380749 CDS YP_002120712.1 195952422 6742823 complement(37200..38369) 1 NC_011126.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: aae:aq_1167 pyruvate ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 38369 6742823 HY04AAS1_0042 Hydrogenobaculum sp. Y04AAS1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002120712.1 37200 R 380749 CDS YP_002120713.1 195952423 6742824 complement(38385..39098) 1 NC_011126.1 PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1166 hypothetical protein; CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit 39098 6742824 HY04AAS1_0043 Hydrogenobaculum sp. Y04AAS1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit YP_002120713.1 38385 R 380749 CDS YP_002120714.1 195952424 6742825 complement(39298..40050) 1 NC_011126.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: aae:aq_671 hydrogenase expression/formation protein B; hydrogenase accessory protein HypB 40050 6742825 HY04AAS1_0044 Hydrogenobaculum sp. Y04AAS1 hydrogenase accessory protein HypB YP_002120714.1 39298 R 380749 CDS YP_002120715.1 195952425 6742826 complement(40043..40432) 1 NC_011126.1 PFAM: HupH hydrogenase expression protein; KEGG: aae:aq_669 hypothetical protein; HupH hydrogenase expression protein 40432 6742826 HY04AAS1_0045 Hydrogenobaculum sp. Y04AAS1 HupH hydrogenase expression protein YP_002120715.1 40043 R 380749 CDS YP_002120716.1 195952426 6742827 complement(40426..42636) 1 NC_011126.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: aae:aq_672 transcriptional regulatory protein HypF; (NiFe) hydrogenase maturation protein HypF 42636 6742827 HY04AAS1_0046 Hydrogenobaculum sp. Y04AAS1 (NiFe) hydrogenase maturation protein HypF YP_002120716.1 40426 R 380749 CDS YP_002120717.1 195952427 6742828 complement(42633..42977) 1 NC_011126.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: aae:aq_1021 hydrogenase accessory protein HypA; hydrogenase nickel insertion protein HypA 42977 6742828 HY04AAS1_0047 Hydrogenobaculum sp. Y04AAS1 hydrogenase nickel insertion protein HypA YP_002120717.1 42633 R 380749 CDS YP_002120718.1 195952428 6742829 complement(42979..43965) 1 NC_011126.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: aae:aq_1019 hydrogenase expression/formation protein; hydrogenase expression/formation protein HypE 43965 6742829 HY04AAS1_0048 Hydrogenobaculum sp. Y04AAS1 hydrogenase expression/formation protein HypE YP_002120718.1 42979 R 380749 CDS YP_002120719.1 195952429 6742830 complement(43956..45050) 1 NC_011126.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: aae:aq_1157 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 45050 6742830 HY04AAS1_0049 Hydrogenobaculum sp. Y04AAS1 hydrogenase expression/formation protein HypD YP_002120719.1 43956 R 380749 CDS YP_002120720.1 195952430 6742831 complement(45028..45267) 1 NC_011126.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: hhe:HH0324 hydrogenase isoenzyme formation protein HypC; hydrogenase assembly chaperone hypC/hupF 45267 6742831 HY04AAS1_0050 Hydrogenobaculum sp. Y04AAS1 hydrogenase assembly chaperone hypC/hupF YP_002120720.1 45028 R 380749 CDS YP_002120721.1 195952431 6742832 complement(45277..45777) 1 NC_011126.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: aae:aq_667 HupD hydrogenase related function; hydrogenase maturation protease 45777 6742832 HY04AAS1_0051 Hydrogenobaculum sp. Y04AAS1 hydrogenase maturation protease YP_002120721.1 45277 R 380749 CDS YP_002120722.1 195952432 6742833 complement(45774..46469) 1 NC_011126.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: aae:aq_665 Ni/Fe hydrogenase B-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 46469 6742833 HY04AAS1_0052 Hydrogenobaculum sp. Y04AAS1 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_002120722.1 45774 R 380749 CDS YP_002120723.1 195952433 6742834 complement(46462..48363) 1 NC_011126.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_662 hydrogenase large chain; nickel-dependent hydrogenase large subunit 48363 6742834 HY04AAS1_0053 Hydrogenobaculum sp. Y04AAS1 nickel-dependent hydrogenase large subunit YP_002120723.1 46462 R 380749 CDS YP_002120724.1 195952434 6742835 complement(48367..49437) 1 NC_011126.1 KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 49437 6742835 HY04AAS1_0054 Hydrogenobaculum sp. Y04AAS1 hydrogenase (NiFe) small subunit HydA YP_002120724.1 48367 R 380749 CDS YP_002120725.1 195952435 6742836 49700..51844 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: cbk:CLL_A1972 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 51844 6742836 HY04AAS1_0055 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002120725.1 49700 D 380749 CDS YP_002120726.1 195952436 6742837 51854..53233 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 53233 6742837 HY04AAS1_0056 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120726.1 51854 D 380749 CDS YP_002120727.1 195952437 6742838 complement(53236..53766) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0629 hypothetical protein; hypothetical protein 53766 6742838 HY04AAS1_0057 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120727.1 53236 R 380749 CDS YP_002120728.1 195952438 6742839 53808..54536 1 NC_011126.1 KEGG: aae:aq_1776 protein; hypothetical protein 54536 6742839 HY04AAS1_0058 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120728.1 53808 D 380749 CDS YP_002120729.1 195952439 6742841 complement(54665..56569) 1 NC_011126.1 PFAM: protein of unknown function DUF255; KEGG: sul:SYO3AOP1_0787 protein of unknown function DUF255; hypothetical protein 56569 6742841 HY04AAS1_0059 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120729.1 54665 R 380749 CDS YP_002120730.1 195952440 6742842 complement(56614..57534) 1 NC_011126.1 PFAM: phosphoesterase DHHA1; KEGG: sul:SYO3AOP1_0354 phosphoesterase DHHA1; phosphoesterase DHHA1 57534 6742842 HY04AAS1_0060 Hydrogenobaculum sp. Y04AAS1 phosphoesterase DHHA1 YP_002120730.1 56614 R 380749 CDS YP_002120731.1 195952441 6742843 complement(57534..59111) 1 NC_011126.1 PFAM: RNA binding S1 domain protein; KEGG: aae:aq_1485 30S ribosomal protein S1; RNA binding S1 domain-containing protein 59111 6742843 HY04AAS1_0061 Hydrogenobaculum sp. Y04AAS1 RNA binding S1 domain-containing protein YP_002120731.1 57534 R 380749 CDS YP_002120732.1 195952442 6742844 complement(59219..59377) 1 NC_011126.1 hypothetical protein 59377 6742844 HY04AAS1_0062 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120732.1 59219 R 380749 CDS YP_002120733.1 195952443 6742845 complement(59382..60137) 1 NC_011126.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: aae:aq_342 MazG protein; MazG family protein 60137 6742845 HY04AAS1_0063 Hydrogenobaculum sp. Y04AAS1 MazG family protein YP_002120733.1 59382 R 380749 CDS YP_002120734.1 195952444 6742847 60800..61264 1 NC_011126.1 KEGG: nis:NIS_0600 hypothetical protein; hypothetical protein 61264 6742847 HY04AAS1_0064 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120734.1 60800 D 380749 CDS YP_002120735.1 195952445 6742848 61362..62363 1 NC_011126.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 62363 6742848 HY04AAS1_0065 Hydrogenobaculum sp. Y04AAS1 ketol-acid reductoisomerase YP_002120735.1 61362 D 380749 CDS YP_002120736.1 195952446 6742849 62360..62983 1 NC_011126.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_1244 hypothetical protein; CDP-alcohol phosphatidyltransferase 62983 6742849 HY04AAS1_0066 Hydrogenobaculum sp. Y04AAS1 CDP-alcohol phosphatidyltransferase YP_002120736.1 62360 D 380749 CDS YP_002120737.1 195952447 6742850 62976..63644 1 NC_011126.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: aae:aq_436 5-amino-6-(5-phosphoribosylamino)uracil reductase; 5-amino-6-(5-phosphoribosylamino)uracil reductase 63644 6742850 HY04AAS1_0067 Hydrogenobaculum sp. Y04AAS1 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002120737.1 62976 D 380749 CDS YP_002120738.1 195952448 6742851 63675..63932 1 NC_011126.1 KEGG: sul:SYO3AOP1_1581 hypothetical protein; hypothetical protein 63932 6742851 HY04AAS1_0068 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120738.1 63675 D 380749 CDS YP_002120739.1 195952449 6742852 63929..64717 1 NC_011126.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 64717 6742852 HY04AAS1_0069 Hydrogenobaculum sp. Y04AAS1 dihydrodipicolinate reductase YP_002120739.1 63929 D 380749 CDS YP_002120740.1 195952450 6742853 64714..65238 1 NC_011126.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: cte:CT0726 HNH endonuclease family protein; HNH endonuclease 65238 6742853 HY04AAS1_0070 Hydrogenobaculum sp. Y04AAS1 HNH endonuclease YP_002120740.1 64714 D 380749 CDS YP_002120741.1 195952451 6742854 65293..65484 1 NC_011126.1 PFAM: ribosomal protein L28; KEGG: aae:aq_080 50S ribosomal protein L28; 50S ribosomal protein L28 65484 6742854 HY04AAS1_0071 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L28 YP_002120741.1 65293 D 380749 CDS YP_002120742.1 195952452 6742855 65536..66447 1 NC_011126.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: aae:aq_135 NADH dehydrogenase (ubiquinone); NAD-dependent epimerase/dehydratase 66447 6742855 HY04AAS1_0072 Hydrogenobaculum sp. Y04AAS1 NAD-dependent epimerase/dehydratase YP_002120742.1 65536 D 380749 CDS YP_002120743.1 195952453 6742856 complement(66424..67596) 1 NC_011126.1 PFAM: phosphate-selective porin O and P; KEGG: aae:aq_1862 hypothetical protein; phosphate-selective porin O and P 67596 6742856 HY04AAS1_0073 Hydrogenobaculum sp. Y04AAS1 phosphate-selective porin O and P YP_002120743.1 66424 R 380749 CDS YP_002120744.1 195952454 6742857 complement(67679..67942) 1 NC_011126.1 PFAM: nitrogen-fixing NifU domain protein; protein of unknown function DUF59; KEGG: sul:SYO3AOP1_0399 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 67942 6742857 HY04AAS1_0074 Hydrogenobaculum sp. Y04AAS1 nitrogen-fixing NifU domain-containing protein YP_002120744.1 67679 R 380749 CDS YP_002120745.1 195952455 6742858 complement(67957..68580) 1 NC_011126.1 PFAM: manganese and iron superoxide dismutase; KEGG: aae:aq_1499 superoxide dismutase (Fe/Mn family); Superoxide dismutase 68580 6742858 HY04AAS1_0075 Hydrogenobaculum sp. Y04AAS1 Superoxide dismutase YP_002120745.1 67957 R 380749 CDS YP_002120746.1 195952456 6742859 complement(68636..69223) 1 NC_011126.1 KEGG: aoe:Clos_2113 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 69223 6742859 HY04AAS1_0076 Hydrogenobaculum sp. Y04AAS1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002120746.1 68636 R 380749 CDS YP_002120747.1 195952457 6742860 complement(69216..70184) 1 NC_011126.1 PFAM: Lytic transglycosylase catalytic; KEGG: aae:aq_1420 hypothetical protein; Lytic transglycosylase 70184 6742860 HY04AAS1_0077 Hydrogenobaculum sp. Y04AAS1 Lytic transglycosylase YP_002120747.1 69216 R 380749 CDS YP_002120748.1 195952458 6742861 complement(70234..72216) 1 NC_011126.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aae:aq_1288 general secretion pathway protein D; general secretion pathway protein D 72216 6742861 HY04AAS1_0078 Hydrogenobaculum sp. Y04AAS1 general secretion pathway protein D YP_002120748.1 70234 R 380749 CDS YP_002120749.1 195952459 6742862 72431..72835 1 NC_011126.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase proenzyme 72835 6742862 HY04AAS1_0079 Hydrogenobaculum sp. Y04AAS1 S-adenosylmethionine decarboxylase proenzyme YP_002120749.1 72431 D 380749 CDS YP_002120750.1 195952460 6742863 72829..73830 1 NC_011126.1 PFAM: SMF family protein; KEGG: aae:aq_1191 hypothetical protein; SMF family protein 73830 6742863 HY04AAS1_0080 Hydrogenobaculum sp. Y04AAS1 SMF family protein YP_002120750.1 72829 D 380749 CDS YP_002120751.1 195952461 6742864 73823..74482 1 NC_011126.1 PFAM: protein of unknown function DUF558; KEGG: aae:aq_165 hypothetical protein; hypothetical protein 74482 6742864 HY04AAS1_0081 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120751.1 73823 D 380749 CDS YP_002120752.1 195952462 6742865 74519..76174 1 NC_011126.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpe:Tpen_1456 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 76174 6742865 HY04AAS1_0082 Hydrogenobaculum sp. Y04AAS1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002120752.1 74519 D 380749 CDS YP_002120753.1 195952463 6742866 76181..77275 1 NC_011126.1 KEGG: aae:aq_1569 protein; hypothetical protein 77275 6742866 HY04AAS1_0083 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120753.1 76181 D 380749 CDS YP_002120754.1 195952464 6742867 77396..78196 1 NC_011126.1 KEGG: bur:Bcep18194_B0411 hypothetical protein; hypothetical protein 78196 6742867 HY04AAS1_0084 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120754.1 77396 D 380749 CDS YP_002120755.1 195952465 6742868 78216..79223 1 NC_011126.1 KEGG: gox:GOX2657 sulfate-binding protein; sulfate-binding protein 79223 6742868 HY04AAS1_0085 Hydrogenobaculum sp. Y04AAS1 sulfate-binding protein YP_002120755.1 78216 D 380749 CDS YP_002120756.1 195952466 6742869 79479..80222 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2122 peptide transport system ATP-binding protein; ABC transporter 80222 6742869 HY04AAS1_0086 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002120756.1 79479 D 380749 CDS YP_002120757.1 195952467 6742870 80215..81468 1 NC_011126.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aae:aq_2120 hemolysin homolog protein; CBS domain containing protein 81468 6742870 HY04AAS1_0087 Hydrogenobaculum sp. Y04AAS1 CBS domain containing protein YP_002120757.1 80215 D 380749 CDS YP_002120758.1 195952468 6742871 81425..82123 1 NC_011126.1 KEGG: aae:aq_2059 hypothetical protein; hypothetical protein 82123 6742871 HY04AAS1_0088 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120758.1 81425 D 380749 CDS YP_002120759.1 195952469 6742872 82156..84036 1 NC_011126.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sul:SYO3AOP1_1587 acetate/CoA ligase; acetate/CoA ligase 84036 6742872 HY04AAS1_0089 Hydrogenobaculum sp. Y04AAS1 acetate/CoA ligase YP_002120759.1 82156 D 380749 CDS YP_002120760.1 195952470 6742873 84037..85557 1 NC_011126.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 85557 purH 6742873 purH Hydrogenobaculum sp. Y04AAS1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002120760.1 84037 D 380749 CDS YP_002120761.1 195952471 6742874 85619..86767 1 NC_011126.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: sul:SYO3AOP1_0405 2-nitropropane dioxygenase NPD; 2-nitropropane dioxygenase NPD 86767 6742874 HY04AAS1_0091 Hydrogenobaculum sp. Y04AAS1 2-nitropropane dioxygenase NPD YP_002120761.1 85619 D 380749 CDS YP_002120762.1 195952472 6742875 86768..87100 1 NC_011126.1 KEGG: aae:aq_2134 protein; hypothetical protein 87100 6742875 HY04AAS1_0092 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120762.1 86768 D 380749 CDS YP_002120763.1 195952473 6742876 87097..87378 1 NC_011126.1 hypothetical protein 87378 6742876 HY04AAS1_0093 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120763.1 87097 D 380749 CDS YP_002120764.1 195952474 6742877 87375..87773 1 NC_011126.1 KEGG: aae:aq_125 protein; hypothetical protein 87773 6742877 HY04AAS1_0094 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120764.1 87375 D 380749 CDS YP_002120765.1 195952475 6742878 87770..88906 1 NC_011126.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 88906 6742878 HY04AAS1_0095 Hydrogenobaculum sp. Y04AAS1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002120765.1 87770 D 380749 CDS YP_002120766.1 195952476 6742879 89036..90628 1 NC_011126.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sul:SYO3AOP1_1718 transposase, IS605 OrfB family; transposase, IS605 OrfB family 90628 6742879 HY04AAS1_0096 Hydrogenobaculum sp. Y04AAS1 transposase, IS605 OrfB family YP_002120766.1 89036 D 380749 CDS YP_002120767.1 195952477 6742880 90661..91845 1 NC_011126.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; KEGG: sul:SYO3AOP1_1578 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 91845 6742880 HY04AAS1_0097 Hydrogenobaculum sp. Y04AAS1 phosphoribosylglycinamide formyltransferase 2 YP_002120767.1 90661 D 380749 CDS YP_002120768.1 195952478 6742881 91855..93654 1 NC_011126.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 93654 6742881 HY04AAS1_0098 Hydrogenobaculum sp. Y04AAS1 GTP-binding protein LepA YP_002120768.1 91855 D 380749 CDS YP_002120769.1 195952479 6742882 93651..94748 1 NC_011126.1 KEGG: aae:aq_454 lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 94748 6742882 HY04AAS1_0099 Hydrogenobaculum sp. Y04AAS1 lysine 2,3-aminomutase YodO family protein YP_002120769.1 93651 D 380749 CDS YP_002120770.1 195952480 6742883 94906..95247 1 NC_011126.1 KEGG: aae:aq_087 hypothetical protein; hypothetical protein 95247 6742883 HY04AAS1_0100 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120770.1 94906 D 380749 CDS YP_002120771.1 195952481 6742884 95259..95582 1 NC_011126.1 KEGG: aae:aq_088 hypothetical protein; hypothetical protein 95582 6742884 HY04AAS1_0101 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120771.1 95259 D 380749 CDS YP_002120772.1 195952482 6742885 95641..96027 1 NC_011126.1 PFAM: Sterol-binding domain protein; KEGG: aae:aq_090 hypothetical protein; Sterol-binding domain-containing protein 96027 6742885 HY04AAS1_0102 Hydrogenobaculum sp. Y04AAS1 Sterol-binding domain-containing protein YP_002120772.1 95641 D 380749 CDS YP_002120773.1 195952483 6742886 96036..97595 1 NC_011126.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: aae:aq_091m AAA family ATPase; PAS modulated sigma54 specific transcriptional regulator, Fis family 97595 6742886 HY04AAS1_0103 Hydrogenobaculum sp. Y04AAS1 PAS modulated sigma54 specific transcriptional regulator, Fis family YP_002120773.1 96036 D 380749 CDS YP_002120774.1 195952484 6742888 complement(97733..98800) 1 NC_011126.1 KEGG: aae:aq_1427 lipid A disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 98800 6742888 HY04AAS1_0104 Hydrogenobaculum sp. Y04AAS1 lipid-A-disaccharide synthase YP_002120774.1 97733 R 380749 CDS YP_002120775.1 195952485 6742889 complement(98793..99194) 1 NC_011126.1 hypothetical protein 99194 6742889 HY04AAS1_0105 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120775.1 98793 R 380749 CDS YP_002120776.1 195952486 6742890 99225..100184 1 NC_011126.1 PFAM: sodium/calcium exchanger membrane region; KEGG: sul:SYO3AOP1_1150 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane protein 100184 6742890 HY04AAS1_0106 Hydrogenobaculum sp. Y04AAS1 sodium/calcium exchanger membrane protein YP_002120776.1 99225 D 380749 CDS YP_002120777.1 195952487 6742891 100181..100489 1 NC_011126.1 PFAM: histone family protein DNA-binding protein; KEGG: sul:SYO3AOP1_1244 histone family protein DNA-binding protein; histone family protein DNA-binding protein 100489 6742891 HY04AAS1_0107 Hydrogenobaculum sp. Y04AAS1 histone family protein DNA-binding protein YP_002120777.1 100181 D 380749 CDS YP_002120778.1 195952488 6742893 100611..101108 1 NC_011126.1 KEGG: aae:aq_1434 pilin; pilin 101108 6742893 HY04AAS1_0108 Hydrogenobaculum sp. Y04AAS1 pilin YP_002120778.1 100611 D 380749 CDS YP_002120779.1 195952489 6742894 101177..101467 1 NC_011126.1 PFAM: ribosomal protein L21; KEGG: tte:TTE0913 50S ribosomal protein L21; 50S ribosomal protein L21 101467 6742894 HY04AAS1_0109 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L21 YP_002120779.1 101177 D 380749 CDS YP_002120780.1 195952490 6742895 101471..101734 1 NC_011126.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 101734 rpmA 6742895 rpmA Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L27 YP_002120780.1 101471 D 380749 CDS YP_002120781.1 195952491 6742896 101727..102344 1 NC_011126.1 PFAM: regulatory protein TetR; KEGG: aae:aq_2185 hypothetical protein; TetR family transcriptional regulator 102344 6742896 HY04AAS1_0111 Hydrogenobaculum sp. Y04AAS1 TetR family transcriptional regulator YP_002120781.1 101727 D 380749 CDS YP_002120782.1 195952492 6742897 102331..104379 1 NC_011126.1 PFAM: glycoside hydrolase family 57; KEGG: cau:Caur_1163 glycoside hydrolase family 57; glycoside hydrolase family 57 104379 6742897 HY04AAS1_0112 Hydrogenobaculum sp. Y04AAS1 glycoside hydrolase family 57 YP_002120782.1 102331 D 380749 CDS YP_002120783.1 195952493 6742898 104394..105593 1 NC_011126.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 105593 6742898 HY04AAS1_0113 Hydrogenobaculum sp. Y04AAS1 tryptophan synthase subunit beta YP_002120783.1 104394 D 380749 CDS YP_002120784.1 195952494 6742899 complement(105596..105910) 1 NC_011126.1 KEGG: aae:aq_1426 protein; hypothetical protein 105910 6742899 HY04AAS1_0114 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120784.1 105596 R 380749 CDS YP_002120785.1 195952495 6742900 106092..106370 1 NC_011126.1 TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: sul:SYO3AOP1_0808 MoaD family protein; MoaD family protein 106370 6742900 HY04AAS1_0115 Hydrogenobaculum sp. Y04AAS1 MoaD family protein YP_002120785.1 106092 D 380749 CDS YP_002120786.1 195952496 6742901 complement(106339..107235) 1 NC_011126.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 107235 miaA 6742901 miaA Hydrogenobaculum sp. Y04AAS1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002120786.1 106339 R 380749 CDS YP_002120787.1 195952497 6742902 complement(107226..107627) 1 NC_011126.1 PFAM: protein of unknown function UPF0079; KEGG: sul:SYO3AOP1_0033 protein of unknown function UPF0079; hypothetical protein 107627 6742902 HY04AAS1_0117 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120787.1 107226 R 380749 CDS YP_002120788.1 195952498 6742904 complement(107800..108723) 1 NC_011126.1 PFAM: MCP methyltransferase CheR-type; KEGG: tex:Teth514_1609 protein-glutamate O-methyltransferase; MCP methyltransferase, CheR-type 108723 6742904 HY04AAS1_0118 Hydrogenobaculum sp. Y04AAS1 MCP methyltransferase, CheR-type YP_002120788.1 107800 R 380749 CDS YP_002120789.1 195952499 6742905 complement(108699..109457) 1 NC_011126.1 KEGG: aae:aq_1489 tRNA guanine-N1 methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 109457 6742905 HY04AAS1_0119 Hydrogenobaculum sp. Y04AAS1 tRNA (guanine-N1)-methyltransferase YP_002120789.1 108699 R 380749 CDS YP_002120790.1 195952500 6742906 complement(109450..109668) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1583 ATP synthase protein I; ATP synthase protein I 109668 6742906 HY04AAS1_0120 Hydrogenobaculum sp. Y04AAS1 ATP synthase protein I YP_002120790.1 109450 R 380749 CDS YP_002120791.1 195952501 6742907 complement(109665..110735) 1 NC_011126.1 PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: aae:aq_951 chorismate mutase/prephenate dehydratase; prephenate dehydratase 110735 6742907 HY04AAS1_0121 Hydrogenobaculum sp. Y04AAS1 prephenate dehydratase YP_002120791.1 109665 R 380749 CDS YP_002120792.1 195952502 6742908 complement(110732..110992) 1 NC_011126.1 KEGG: aae:aq_1201 protein; hypothetical protein 110992 6742908 HY04AAS1_0122 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120792.1 110732 R 380749 CDS YP_002120793.1 195952503 6742909 111058..111939 1 NC_011126.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aae:aq_1602 protein-export membrane protein SecF; protein-export membrane protein SecF 111939 6742909 HY04AAS1_0123 Hydrogenobaculum sp. Y04AAS1 protein-export membrane protein SecF YP_002120793.1 111058 D 380749 CDS YP_002120794.1 195952504 6742910 112003..112119 1 NC_011126.1 hypothetical protein 112119 6742910 HY04AAS1_0124 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120794.1 112003 D 380749 CDS YP_002120795.1 195952505 6742911 112247..113533 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_2186 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 113533 6742911 HY04AAS1_0125 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002120795.1 112247 D 380749 CDS YP_002120796.1 195952506 6742912 113585..113743 1 NC_011126.1 hypothetical protein 113743 6742912 HY04AAS1_0126 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120796.1 113585 D 380749 CDS YP_002120797.1 195952507 6742913 complement(113775..114533) 1 NC_011126.1 PFAM: protein of unknown function DUF81; KEGG: tbd:Tbd_2380 hypothetical protein; hypothetical protein 114533 6742913 HY04AAS1_0127 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120797.1 113775 R 380749 CDS YP_002120798.1 195952508 6742914 complement(114601..115203) 1 NC_011126.1 PFAM: thymidylate kinase; KEGG: aae:aq_969 thymidylate kinase; dTMP kinase 115203 6742914 HY04AAS1_0128 Hydrogenobaculum sp. Y04AAS1 dTMP kinase YP_002120798.1 114601 R 380749 CDS YP_002120799.1 195952509 6742915 complement(115203..116660) 1 NC_011126.1 KEGG: aae:aq_1472 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 116660 6742915 HY04AAS1_0129 Hydrogenobaculum sp. Y04AAS1 replicative DNA helicase YP_002120799.1 115203 R 380749 CDS YP_002120800.1 195952510 6742916 complement(116697..117299) 1 NC_011126.1 PFAM: protein of unknown function DUF374; KEGG: fnu:FN1269 hypothetical lipoprotein; hypothetical protein 117299 6742916 HY04AAS1_0130 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120800.1 116697 R 380749 CDS YP_002120801.1 195952511 6742917 complement(117348..118757) 1 NC_011126.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aae:aq_111 glutamine synthetase; glutamine synthetase, type I 118757 6742917 HY04AAS1_0131 Hydrogenobaculum sp. Y04AAS1 glutamine synthetase, type I YP_002120801.1 117348 R 380749 CDS YP_002120802.1 195952512 6742918 complement(118794..119132) 1 NC_011126.1 PFAM: nitrogen regulatory protein P-II; KEGG: aae:aq_109 nitrogen regulatory PII protein; nitrogen regulatory protein P-II 119132 6742918 HY04AAS1_0132 Hydrogenobaculum sp. Y04AAS1 nitrogen regulatory protein P-II YP_002120802.1 118794 R 380749 CDS YP_002120803.1 195952513 6742919 complement(119266..120174) 1 NC_011126.1 TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin binding domain; molybdopterin cofactor biosynthesis MoaC region; KEGG: sul:SYO3AOP1_1766 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 120174 6742919 HY04AAS1_0133 Hydrogenobaculum sp. Y04AAS1 molybdenum cofactor biosynthesis protein C YP_002120803.1 119266 R 380749 CDS YP_002120804.1 195952514 6742920 complement(120171..121013) 1 NC_011126.1 PFAM: purine phosphorylase family 2; KEGG: aae:aq_568 probable 5'-methylthioadenosine phosphorylase; purine phosphorylase family 2 121013 6742920 HY04AAS1_0134 Hydrogenobaculum sp. Y04AAS1 purine phosphorylase family 2 YP_002120804.1 120171 R 380749 CDS YP_002120805.1 195952515 6742921 complement(121047..121799) 1 NC_011126.1 PFAM: polysaccharide deacetylase; KEGG: cbf:CLI_2851 polysaccharide deacetylase family protein; polysaccharide deacetylase 121799 6742921 HY04AAS1_0135 Hydrogenobaculum sp. Y04AAS1 polysaccharide deacetylase YP_002120805.1 121047 R 380749 CDS YP_002120806.1 195952516 6742922 complement(121866..122702) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0421 hypothetical protein; hypothetical protein 122702 6742922 HY04AAS1_0136 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120806.1 121866 R 380749 CDS YP_002120807.1 195952517 6742923 complement(122695..123561) 1 NC_011126.1 KEGG: aae:aq_521 D-alanine:D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; D-alanine/D-alanine ligase 123561 6742923 HY04AAS1_0137 Hydrogenobaculum sp. Y04AAS1 D-alanine/D-alanine ligase YP_002120807.1 122695 R 380749 CDS YP_002120808.1 195952518 6742924 complement(123552..124400) 1 NC_011126.1 KEGG: aae:aq_520 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 124400 6742924 HY04AAS1_0138 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002120808.1 123552 R 380749 CDS YP_002120809.1 195952519 6742925 124472..125518 1 NC_011126.1 KEGG: nis:NIS_0136 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 125518 6742925 HY04AAS1_0139 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor protein YP_002120809.1 124472 D 380749 CDS YP_002120810.1 195952520 6742926 125515..126105 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate cyclase 126105 6742926 HY04AAS1_0140 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase YP_002120810.1 125515 D 380749 CDS YP_002120811.1 195952521 6742927 126128..126970 1 NC_011126.1 PFAM: EAL domain protein; KEGG: nmu:Nmul_A1138 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); diguanylate phosphodiesterase 126970 6742927 HY04AAS1_0141 Hydrogenobaculum sp. Y04AAS1 diguanylate phosphodiesterase YP_002120811.1 126128 D 380749 CDS YP_002120812.1 195952522 6742929 127113..127388 1 NC_011126.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 127388 rpsO 6742929 rpsO Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S15 YP_002120812.1 127113 D 380749 CDS YP_002120813.1 195952523 6742930 127391..129502 1 NC_011126.1 KEGG: aae:aq_221 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 129502 6742930 HY04AAS1_0143 Hydrogenobaculum sp. Y04AAS1 polynucleotide phosphorylase/polyadenylase YP_002120813.1 127391 D 380749 CDS YP_002120814.1 195952524 6742931 129506..129940 1 NC_011126.1 KEGG: aae:aq_220 deoxyuridine 5'triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 129940 6742931 HY04AAS1_0144 Hydrogenobaculum sp. Y04AAS1 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_002120814.1 129506 D 380749 CDS YP_002120815.1 195952525 6742932 129937..130950 1 NC_011126.1 KEGG: aae:aq_196 phosphoribosylanthranilate transferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 130950 6742932 HY04AAS1_0145 Hydrogenobaculum sp. Y04AAS1 anthranilate phosphoribosyltransferase YP_002120815.1 129937 D 380749 CDS YP_002120816.1 195952526 6742933 130947..131684 1 NC_011126.1 PFAM: protein of unknown function DUF178; KEGG: aae:aq_1070 hypothetical protein; hypothetical protein 131684 6742933 HY04AAS1_0146 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120816.1 130947 D 380749 CDS YP_002120817.1 195952527 6742934 complement(131681..132880) 1 NC_011126.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 132880 clpX 6742934 clpX Hydrogenobaculum sp. Y04AAS1 ATP-dependent protease ATP-binding subunit ClpX YP_002120817.1 131681 R 380749 CDS YP_002120818.1 195952528 6742935 complement(132882..133499) 1 NC_011126.1 KEGG: aae:aq_1339 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 133499 6742935 HY04AAS1_0148 Hydrogenobaculum sp. Y04AAS1 ATP-dependent Clp protease, proteolytic subunit ClpP YP_002120818.1 132882 R 380749 CDS YP_002120819.1 195952529 6742936 complement(133486..134856) 1 NC_011126.1 PFAM: trigger factor domain; KEGG: aae:aq_1340 trigger factor; trigger factor domain 134856 6742936 HY04AAS1_0149 Hydrogenobaculum sp. Y04AAS1 trigger factor domain YP_002120819.1 133486 R 380749 CDS YP_002120820.1 195952530 6742938 complement(135039..135419) 1 NC_011126.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: pab:PAB0825 translation initiation inhibitor; endoribonuclease L-PSP 135419 6742938 HY04AAS1_0150 Hydrogenobaculum sp. Y04AAS1 endoribonuclease L-PSP YP_002120820.1 135039 R 380749 CDS YP_002120821.1 195952531 6742939 complement(135416..136501) 1 NC_011126.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 136501 6742939 HY04AAS1_0151 Hydrogenobaculum sp. Y04AAS1 cell division protein FtsZ YP_002120821.1 135416 R 380749 CDS YP_002120822.1 195952532 6742941 complement(136690..138462) 1 NC_011126.1 PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: AAA ATPase; KEGG: pfo:PflO1_0822 ABC transporter-like; ABC transporter 138462 6742941 HY04AAS1_0152 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002120822.1 136690 R 380749 CDS YP_002120823.1 195952533 6742942 complement(138475..139182) 1 NC_011126.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: aae:aq_833 flagellar protein FlgA; flagella basal body P-ring formation protein FlgA 139182 6742942 HY04AAS1_0153 Hydrogenobaculum sp. Y04AAS1 flagella basal body P-ring formation protein FlgA YP_002120823.1 138475 R 380749 CDS YP_002120824.1 195952534 6742943 complement(139182..139973) 1 NC_011126.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_834 flagellar hook basal-body protein FlgG; flagellar basal-body rod protein FlgG 139973 6742943 HY04AAS1_0154 Hydrogenobaculum sp. Y04AAS1 flagellar basal-body rod protein FlgG YP_002120824.1 139182 R 380749 CDS YP_002120825.1 195952535 6742944 complement(140030..141325) 1 NC_011126.1 KEGG: sml:Smlt1009 glycine-rich autotransporter protein; hypothetical protein 141325 6742944 HY04AAS1_0155 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120825.1 140030 R 380749 CDS YP_002120826.1 195952536 6742945 complement(141337..142248) 1 NC_011126.1 KEGG: aae:aq_1436 protein; hypothetical protein 142248 6742945 HY04AAS1_0156 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120826.1 141337 R 380749 CDS YP_002120827.1 195952537 6742946 complement(142232..142579) 1 NC_011126.1 KEGG: aae:aq_1435 pilin; pilin 142579 6742946 HY04AAS1_0157 Hydrogenobaculum sp. Y04AAS1 pilin YP_002120827.1 142232 R 380749 CDS YP_002120828.1 195952538 6742947 complement(142609..143985) 1 NC_011126.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: aae:aq_1372 argininosuccinate lyase; argininosuccinate lyase 143985 6742947 HY04AAS1_0158 Hydrogenobaculum sp. Y04AAS1 argininosuccinate lyase YP_002120828.1 142609 R 380749 CDS YP_002120829.1 195952539 6742948 complement(143982..144755) 1 NC_011126.1 PFAM: cytochrome c assembly protein; KEGG: aae:aq_055 cytochrome c biogenesis protein; cytochrome c assembly protein 144755 6742948 HY04AAS1_0159 Hydrogenobaculum sp. Y04AAS1 cytochrome c assembly protein YP_002120829.1 143982 R 380749 CDS YP_002120830.1 195952540 6742949 complement(144752..145957) 1 NC_011126.1 KEGG: aae:aq_849 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 145957 6742949 HY04AAS1_0160 Hydrogenobaculum sp. Y04AAS1 MiaB-like tRNA modifying protein YliG YP_002120830.1 144752 R 380749 CDS YP_002120831.1 195952541 6742950 complement(145959..147077) 1 NC_011126.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 147077 6742950 HY04AAS1_0161 Hydrogenobaculum sp. Y04AAS1 S-adenosylmethionine synthetase YP_002120831.1 145959 R 380749 CDS YP_002120832.1 195952542 6742951 complement(147070..148029) 1 NC_011126.1 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate; bifunctional phosphoglucose/phosphomannose isomerase 148029 6742951 HY04AAS1_0162 Hydrogenobaculum sp. Y04AAS1 bifunctional phosphoglucose/phosphomannose isomerase YP_002120832.1 147070 R 380749 CDS YP_002120833.1 195952543 6742952 148114..148395 1 NC_011126.1 PFAM: acylphosphatase; KEGG: sso:SSO0887 acylphosphatase; acylphosphatase 148395 6742952 HY04AAS1_0163 Hydrogenobaculum sp. Y04AAS1 acylphosphatase YP_002120833.1 148114 D 380749 CDS YP_002120834.1 195952544 6742953 148358..149419 1 NC_011126.1 PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: aae:aq_652 lipoprotein; Peptidase M23 149419 6742953 HY04AAS1_0164 Hydrogenobaculum sp. Y04AAS1 Peptidase M23 YP_002120834.1 148358 D 380749 CDS YP_002120835.1 195952545 6742954 149458..149979 1 NC_011126.1 PFAM: Inorganic pyrophosphatase; KEGG: aae:aq_1547 inorganic pyrophosphatase; Inorganic diphosphatase 149979 6742954 HY04AAS1_0165 Hydrogenobaculum sp. Y04AAS1 Inorganic diphosphatase YP_002120835.1 149458 D 380749 CDS YP_002120836.1 195952546 6742955 149976..150935 1 NC_011126.1 KEGG: aae:aq_1546 polysialic acid capsule expression protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 150935 6742955 HY04AAS1_0166 Hydrogenobaculum sp. Y04AAS1 KpsF/GutQ family protein YP_002120836.1 149976 D 380749 CDS YP_002120837.1 195952547 6742956 150932..151576 1 NC_011126.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_2154 phosphotidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 151576 6742956 HY04AAS1_0167 Hydrogenobaculum sp. Y04AAS1 CDP-alcohol phosphatidyltransferase YP_002120837.1 150932 D 380749 CDS YP_002120838.1 195952548 6742957 151581..153419 1 NC_011126.1 KEGG: aae:aq_1185 hypothetical protein; hypothetical protein 153419 6742957 HY04AAS1_0168 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120838.1 151581 D 380749 CDS YP_002120839.1 195952549 6742958 153422..153796 1 NC_011126.1 KEGG: aae:aq_1184 flagellar basal body rod protein FlgB; flagellar basal body rod protein FlgB 153796 6742958 HY04AAS1_0169 Hydrogenobaculum sp. Y04AAS1 flagellar basal body rod protein FlgB YP_002120839.1 153422 D 380749 CDS YP_002120840.1 195952550 6742959 153811..154221 1 NC_011126.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_1183 flagellar biosynthesis FlgC; flagellar basal-body rod protein FlgC 154221 6742959 HY04AAS1_0170 Hydrogenobaculum sp. Y04AAS1 flagellar basal-body rod protein FlgC YP_002120840.1 153811 D 380749 CDS YP_002120841.1 195952551 6742960 154224..154529 1 NC_011126.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: aae:aq_1182a flagellar hook-basal body protein; flagellar hook-basal body complex subunit FliE 154529 6742960 HY04AAS1_0171 Hydrogenobaculum sp. Y04AAS1 flagellar hook-basal body complex subunit FliE YP_002120841.1 154224 D 380749 CDS YP_002120842.1 195952552 6742961 154537..156039 1 NC_011126.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: aae:aq_1182 Flagellar M-ring protein; flagellar M-ring protein FliF 156039 6742961 HY04AAS1_0172 Hydrogenobaculum sp. Y04AAS1 flagellar M-ring protein FliF YP_002120842.1 154537 D 380749 CDS YP_002120843.1 195952553 6742962 156052..157017 1 NC_011126.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: sul:SYO3AOP1_1659 flagellar motor switch protein FliM; flagellar motor switch protein FliM 157017 6742962 HY04AAS1_0173 Hydrogenobaculum sp. Y04AAS1 flagellar motor switch protein FliM YP_002120843.1 156052 D 380749 CDS YP_002120844.1 195952554 6742963 157017..157466 1 NC_011126.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: cno:NT01CX_1869 flagellar motor switch protein; flagellar motor switch protein FliN 157466 6742963 HY04AAS1_0174 Hydrogenobaculum sp. Y04AAS1 flagellar motor switch protein FliN YP_002120844.1 157017 D 380749 CDS YP_002120845.1 195952555 6742964 complement(157467..158387) 1 NC_011126.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: mtp:Mthe_0686 1-phosphofructokinase; 1-phosphofructokinase 158387 6742964 HY04AAS1_0175 Hydrogenobaculum sp. Y04AAS1 1-phosphofructokinase YP_002120845.1 157467 R 380749 CDS YP_002120846.1 195952556 6742965 complement(158384..159286) 1 NC_011126.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: nis:NIS_0927 fructose-bisphosphate aldolase, class I; aldolase 159286 6742965 HY04AAS1_0176 Hydrogenobaculum sp. Y04AAS1 aldolase YP_002120846.1 158384 R 380749 CDS YP_002120847.1 195952557 6742966 complement(159279..159836) 1 NC_011126.1 KEGG: aae:aq_1534 protein; hypothetical protein 159836 6742966 HY04AAS1_0177 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120847.1 159279 R 380749 CDS YP_002120848.1 195952558 6742967 complement(159833..160750) 1 NC_011126.1 PFAM: Mammalian cell entry related domain protein; KEGG: aae:aq_1533 ABC transport system substrate-bindin protein; Mammalian cell entry related domain-containing protein 160750 6742967 HY04AAS1_0178 Hydrogenobaculum sp. Y04AAS1 Mammalian cell entry related domain-containing protein YP_002120848.1 159833 R 380749 CDS YP_002120849.1 195952559 6742968 complement(160743..161477) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_1531 ABC transport system ATP-binding protein; ABC transporter 161477 6742968 HY04AAS1_0179 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002120849.1 160743 R 380749 CDS YP_002120850.1 195952560 6742969 complement(161474..162457) 1 NC_011126.1 PFAM: protein of unknown function DUF140; KEGG: aae:aq_1530 ABC transport system permease protein; hypothetical protein 162457 6742969 HY04AAS1_0180 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120850.1 161474 R 380749 CDS YP_002120851.1 195952561 6742970 162477..162947 1 NC_011126.1 hypothetical protein 162947 6742970 HY04AAS1_0181 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120851.1 162477 D 380749 CDS YP_002120852.1 195952562 6742971 162944..163870 1 NC_011126.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: aae:aq_147 cobalamin synthesis related protein CobW; cobalamin synthesis protein P47K 163870 6742971 HY04AAS1_0182 Hydrogenobaculum sp. Y04AAS1 cobalamin synthesis protein P47K YP_002120852.1 162944 D 380749 CDS YP_002120853.1 195952563 6742972 163878..164294 1 NC_011126.1 KEGG: ccv:CCV52592_2170 pyridoxal phosphate-dependent enzyme; hypothetical protein 164294 6742972 HY04AAS1_0183 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120853.1 163878 D 380749 CDS YP_002120854.1 195952564 6742973 complement(164282..165169) 1 NC_011126.1 KEGG: tac:Ta1156 hypothetical membrane protein; hypothetical protein 165169 6742973 HY04AAS1_0184 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120854.1 164282 R 380749 CDS YP_002120855.1 195952565 6742974 complement(165166..165864) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0850 hypothetical protein; hypothetical protein 165864 6742974 HY04AAS1_0185 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120855.1 165166 R 380749 CDS YP_002120856.1 195952566 6742975 complement(165861..166052) 1 NC_011126.1 TIGRFAM: DNA binding domain protein, excisionase family; transcriptional antiterminator, BglG 166052 6742975 HY04AAS1_0186 Hydrogenobaculum sp. Y04AAS1 transcriptional antiterminator, BglG YP_002120856.1 165861 R 380749 CDS YP_002120857.1 195952567 6742976 complement(166140..166517) 1 NC_011126.1 KEGG: aae:aq_aa40 hypothetical protein; hypothetical protein 166517 6742976 HY04AAS1_0187 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120857.1 166140 R 380749 CDS YP_002120858.1 195952568 6742977 complement(166537..167208) 1 NC_011126.1 TIGRFAM: transcriptional activator, Baf family; KEGG: ccv:CCV52592_0993 type III pantothenate kinase (pantothenic acid kinase)(PanK-III); Baf family transcriptional acitvator 167208 6742977 HY04AAS1_0188 Hydrogenobaculum sp. Y04AAS1 Baf family transcriptional acitvator YP_002120858.1 166537 R 380749 CDS YP_002120859.1 195952569 6742978 complement(167205..168674) 1 NC_011126.1 KEGG: aae:aq_2023 inosine monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 168674 6742978 HY04AAS1_0189 Hydrogenobaculum sp. Y04AAS1 inosine-5'-monophosphate dehydrogenase YP_002120859.1 167205 R 380749 CDS YP_002120860.1 195952570 6742979 168775..168966 1 NC_011126.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: aae:aq_064b sec-independent protein translocase protein; twin-arginine translocation protein, TatA/E family subunit 168966 6742979 HY04AAS1_0190 Hydrogenobaculum sp. Y04AAS1 twin-arginine translocation protein, TatA/E family subunit YP_002120860.1 168775 D 380749 CDS YP_002120861.1 195952571 6742980 169021..169209 1 NC_011126.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: aae:aq_064c sec-independent protein translocase protein; twin-arginine translocation protein, TatA/E family subunit 169209 6742980 HY04AAS1_0191 Hydrogenobaculum sp. Y04AAS1 twin-arginine translocation protein, TatA/E family subunit YP_002120861.1 169021 D 380749 CDS YP_002120862.1 195952572 6742981 169212..169772 1 NC_011126.1 KEGG: sul:SYO3AOP1_0929 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 169772 6742981 HY04AAS1_0192 Hydrogenobaculum sp. Y04AAS1 chemotaxis phosphatase, CheZ YP_002120862.1 169212 D 380749 CDS YP_002120863.1 195952573 6742982 169786..170169 1 NC_011126.1 PFAM: response regulator receiver; KEGG: sul:SYO3AOP1_0930 response regulator receiver protein; response regulator receiver protein 170169 6742982 HY04AAS1_0193 Hydrogenobaculum sp. Y04AAS1 response regulator receiver protein YP_002120863.1 169786 D 380749 CDS YP_002120864.1 195952574 6742983 170187..172055 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_0922 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 172055 6742983 HY04AAS1_0194 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002120864.1 170187 D 380749 CDS YP_002120865.1 195952575 6742984 172077..172442 1 NC_011126.1 KEGG: sul:SYO3AOP1_0923 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 172442 6742984 HY04AAS1_0195 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002120865.1 172077 D 380749 CDS YP_002120866.1 195952576 6742985 172455..173495 1 NC_011126.1 PFAM: response regulator receiver; CheW domain protein; KEGG: sul:SYO3AOP1_0924 response regulator receiver modulated chemotaxis protein CheW; response regulator receiver modulated chemotaxis protein CheW 173495 6742985 HY04AAS1_0196 Hydrogenobaculum sp. Y04AAS1 response regulator receiver modulated chemotaxis protein CheW YP_002120866.1 172455 D 380749 CDS YP_002120867.1 195952577 6742986 173499..175562 1 NC_011126.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sul:SYO3AOP1_0926 chemotaxis protein CheA; chemotaxis protein CheA 175562 6742986 HY04AAS1_0197 Hydrogenobaculum sp. Y04AAS1 chemotaxis protein CheA YP_002120867.1 173499 D 380749 CDS YP_002120868.1 195952578 6742987 175669..176382 1 NC_011126.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: aae:aq_566 biotin [acetyl-CoA-carboxylase] ligase; biotin/acetyl-CoA-carboxylase ligase 176382 6742987 HY04AAS1_0198 Hydrogenobaculum sp. Y04AAS1 biotin/acetyl-CoA-carboxylase ligase YP_002120868.1 175669 D 380749 CDS YP_002120869.1 195952579 6742988 176413..176925 1 NC_011126.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: aae:aq_157 protein; outer membrane chaperone Skp 176925 6742988 HY04AAS1_0199 Hydrogenobaculum sp. Y04AAS1 outer membrane chaperone Skp YP_002120869.1 176413 D 380749 CDS YP_002120870.1 195952580 6742989 176922..177896 1 NC_011126.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: aae:aq_538 UDP-3-O-[3-hydroxymyristoyl] glucosamine N acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 177896 6742989 HY04AAS1_0200 Hydrogenobaculum sp. Y04AAS1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_002120870.1 176922 D 380749 CDS YP_002120871.1 195952581 6742990 complement(177893..178954) 1 NC_011126.1 KEGG: aae:aq_359 protein; permease-like protein 178954 6742990 HY04AAS1_0201 Hydrogenobaculum sp. Y04AAS1 permease-like protein YP_002120871.1 177893 R 380749 CDS YP_002120872.1 195952582 6742991 complement(178954..179805) 1 NC_011126.1 PFAM: protein of unknown function DUF114; KEGG: aae:aq_814 hypothetical protein; hypothetical protein 179805 6742991 HY04AAS1_0202 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120872.1 178954 R 380749 CDS YP_002120873.1 195952583 6742992 complement(179835..180575) 1 NC_011126.1 KEGG: aae:aq_1526 DNA polymerase III delta' subunit; DNA polymerase III subunit delta' 180575 6742992 HY04AAS1_0203 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunit delta' YP_002120873.1 179835 R 380749 CDS YP_002120874.1 195952584 6742993 complement(180577..181521) 1 NC_011126.1 PFAM: aminodeoxychorismate lyase; KEGG: aae:aq_775 hypothetical protein; aminodeoxychorismate lyase 181521 6742993 HY04AAS1_0204 Hydrogenobaculum sp. Y04AAS1 aminodeoxychorismate lyase YP_002120874.1 180577 R 380749 CDS YP_002120875.1 195952585 6742994 complement(181505..181876) 1 NC_011126.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: aae:aq_1498 Holliday junction resolvase; Holliday junction resolvase YqgF 181876 6742994 HY04AAS1_0205 Hydrogenobaculum sp. Y04AAS1 Holliday junction resolvase YqgF YP_002120875.1 181505 R 380749 CDS YP_002120876.1 195952586 6742995 complement(181895..183418) 1 NC_011126.1 PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 183418 6742995 HY04AAS1_0206 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120876.1 181895 R 380749 CDS YP_002120877.1 195952587 6742996 complement(183458..185776) 1 NC_011126.1 KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 185776 6742996 HY04AAS1_0207 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase YP_002120877.1 183458 R 380749 CDS YP_002120878.1 195952588 6742997 complement(185773..188616) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 188616 6742997 HY04AAS1_0208 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_002120878.1 185773 R 380749 CDS YP_002120879.1 195952589 6742998 complement(188690..190912) 1 NC_011126.1 PFAM: EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator; diguanylate phosphodiesterase 190912 6742998 HY04AAS1_0209 Hydrogenobaculum sp. Y04AAS1 diguanylate phosphodiesterase YP_002120879.1 188690 R 380749 CDS YP_002120880.1 195952590 6742999 191040..191273 1 NC_011126.1 hypothetical protein 191273 6742999 HY04AAS1_0210 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120880.1 191040 D 380749 CDS YP_002120881.1 195952591 6743000 191242..191796 1 NC_011126.1 KEGG: asu:Asuc_0762 lytic transglycosylase catalytic; hypothetical protein 191796 6743000 HY04AAS1_0211 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120881.1 191242 D 380749 CDS YP_002120882.1 195952592 6743001 191807..192931 1 NC_011126.1 PFAM: cell cycle protein; KEGG: aae:aq_1139 cell division protein FtsW; cell cycle protein 192931 6743001 HY04AAS1_0212 Hydrogenobaculum sp. Y04AAS1 cell cycle protein YP_002120882.1 191807 D 380749 CDS YP_002120883.1 195952593 6743002 192913..193980 1 NC_011126.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 193980 murG 6743002 murG Hydrogenobaculum sp. Y04AAS1 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_002120883.1 192913 D 380749 CDS YP_002120884.1 195952594 6743003 193977..195065 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nis:NIS_0636 hypothetical protein; diguanylate cyclase 195065 6743003 HY04AAS1_0214 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase YP_002120884.1 193977 D 380749 CDS YP_002120885.1 195952595 6743004 195107..195571 1 NC_011126.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: aae:aq_574 NADH dehydrogenase I chain E; NADH-quinone oxidoreductase subunit E 195571 6743004 HY04AAS1_0215 Hydrogenobaculum sp. Y04AAS1 NADH-quinone oxidoreductase subunit E YP_002120885.1 195107 D 380749 CDS YP_002120886.1 195952596 6743005 195546..196823 1 NC_011126.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: aae:aq_573 NADH dehydrogenase I chain F; NADH dehydrogenase (quinone) 196823 6743005 HY04AAS1_0216 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002120886.1 195546 D 380749 CDS YP_002120887.1 195952597 6743006 196839..198503 1 NC_011126.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 198503 6743006 HY04AAS1_0217 Hydrogenobaculum sp. Y04AAS1 dihydroxy-acid dehydratase YP_002120887.1 196839 D 380749 CDS YP_002120888.1 195952598 6743007 198514..199644 1 NC_011126.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 199644 tgt 6743007 tgt Hydrogenobaculum sp. Y04AAS1 queuine tRNA-ribosyltransferase YP_002120888.1 198514 D 380749 CDS YP_002120889.1 195952599 6743008 199661..199813 1 NC_011126.1 hypothetical protein 199813 6743008 HY04AAS1_0219 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120889.1 199661 D 380749 CDS YP_002120890.1 195952600 6743009 complement(199850..200503) 1 NC_011126.1 KEGG: aae:aq_021 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase, type I 200503 6743009 HY04AAS1_0220 Hydrogenobaculum sp. Y04AAS1 3-dehydroquinate dehydratase, type I YP_002120890.1 199850 R 380749 CDS YP_002120891.1 195952601 6743010 complement(200503..201660) 1 NC_011126.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 201660 6743010 HY04AAS1_0221 Hydrogenobaculum sp. Y04AAS1 chorismate synthase YP_002120891.1 200503 R 380749 CDS YP_002120892.1 195952602 6743011 complement(201964..202929) 1 NC_011126.1 KEGG: bbt:BBta_1404 hypothetical protein; hypothetical protein 202929 6743011 HY04AAS1_0222 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120892.1 201964 R 380749 CDS YP_002120893.1 195952603 6743013 complement(203362..203871) 1 NC_011126.1 KEGG: aae:aq_1660 hypothetical protein; hypothetical protein 203871 6743013 HY04AAS1_0223 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120893.1 203362 R 380749 CDS YP_002120894.1 195952604 6743014 complement(204251..204667) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1078 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 204667 6743014 HY04AAS1_0224 Hydrogenobaculum sp. Y04AAS1 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002120894.1 204251 R 380749 CDS YP_002120895.1 195952605 6743015 complement(204754..204981) 1 NC_011126.1 hypothetical protein 204981 6743015 HY04AAS1_0225 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120895.1 204754 R 380749 CDS YP_002120896.1 195952606 6743016 complement(205357..205491) 1 NC_011126.1 hypothetical protein 205491 6743016 HY04AAS1_0226 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120896.1 205357 R 380749 CDS YP_002120897.1 195952607 6743017 complement(205560..206144) 1 NC_011126.1 hypothetical protein 206144 6743017 HY04AAS1_0227 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120897.1 205560 R 380749 CDS YP_002120898.1 195952608 6743018 complement(206156..206350) 1 NC_011126.1 hypothetical protein 206350 6743018 HY04AAS1_0228 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120898.1 206156 R 380749 CDS YP_002120899.1 195952609 6743019 complement(206397..206975) 1 NC_011126.1 hypothetical protein 206975 6743019 HY04AAS1_0229 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120899.1 206397 R 380749 CDS YP_002120900.1 195952610 6743020 207147..208079 1 NC_011126.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 208079 6743020 HY04AAS1_0230 Hydrogenobaculum sp. Y04AAS1 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002120900.1 207147 D 380749 CDS YP_002120901.1 195952611 6743021 208076..209041 1 NC_011126.1 TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aae:aq_1556 cysteine synthase, O-acetylserine (thiol) lyase B; cysteine synthase B 209041 6743021 HY04AAS1_0231 Hydrogenobaculum sp. Y04AAS1 cysteine synthase B YP_002120901.1 208076 D 380749 CDS YP_002120902.1 195952612 6743022 209043..209558 1 NC_011126.1 PFAM: protein of unknown function DUF177; KEGG: aae:aq_1103 hypothetical protein; hypothetical protein 209558 6743022 HY04AAS1_0232 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120902.1 209043 D 380749 CDS YP_002120903.1 195952613 6743023 209539..209721 1 NC_011126.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 209721 rpmF 6743023 rpmF Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L32 YP_002120903.1 209539 D 380749 CDS YP_002120904.1 195952614 6743024 209733..210752 1 NC_011126.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 210752 6743024 HY04AAS1_0234 Hydrogenobaculum sp. Y04AAS1 glycerol-3-phosphate acyltransferase PlsX YP_002120904.1 209733 D 380749 CDS YP_002120905.1 195952615 6743025 210752..211663 1 NC_011126.1 KEGG: aae:aq_1099 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 211663 6743025 HY04AAS1_0235 Hydrogenobaculum sp. Y04AAS1 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002120905.1 210752 D 380749 CDS YP_002120906.1 195952616 6743026 211665..212078 1 NC_011126.1 KEGG: aae:aq_1356 protein; hypothetical protein 212078 6743026 HY04AAS1_0236 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120906.1 211665 D 380749 CDS YP_002120907.1 195952617 6743027 212146..212715 1 NC_011126.1 PFAM: oxidoreductase molybdopterin binding; KEGG: aae:aq_979 hypothetical protein; oxidoreductase molybdopterin-binding protein 212715 6743027 HY04AAS1_0237 Hydrogenobaculum sp. Y04AAS1 oxidoreductase molybdopterin-binding protein YP_002120907.1 212146 D 380749 CDS YP_002120908.1 195952618 6743028 complement(212718..213620) 1 NC_011126.1 PFAM: Ppx/GppA phosphatase; KEGG: aae:aq_891 exopolyphosphatase; Ppx/GppA phosphatase 213620 6743028 HY04AAS1_0238 Hydrogenobaculum sp. Y04AAS1 Ppx/GppA phosphatase YP_002120908.1 212718 R 380749 CDS YP_002120909.1 195952619 6743029 complement(213623..213838) 1 NC_011126.1 hypothetical protein 213838 6743029 HY04AAS1_0239 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120909.1 213623 R 380749 CDS YP_002120910.1 195952620 6743030 complement(213835..214746) 1 NC_011126.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: tme:Tmel_0941 ATPase associated with various cellular activities, AAA_3; ATPase 214746 6743030 HY04AAS1_0240 Hydrogenobaculum sp. Y04AAS1 ATPase YP_002120910.1 213835 R 380749 CDS YP_002120911.1 195952621 6743031 complement(214767..216689) 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_563 hypothetical protein; diguanylate cyclase 216689 6743031 HY04AAS1_0241 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase YP_002120911.1 214767 R 380749 CDS YP_002120912.1 195952622 6743032 complement(216815..216907) 1 NC_011126.1 hypothetical protein 216907 6743032 HY04AAS1_0242 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120912.1 216815 R 380749 CDS YP_002120913.1 195952623 6743033 217001..217282 1 NC_011126.1 KEGG: msy:MS53_0054 hypothetical protein; hypothetical protein 217282 6743033 HY04AAS1_0243 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120913.1 217001 D 380749 CDS YP_002120914.1 195952624 6743034 217272..217943 1 NC_011126.1 KEGG: aae:aq_1478 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR 217943 6743034 HY04AAS1_0244 Hydrogenobaculum sp. Y04AAS1 recombination protein RecR YP_002120914.1 217272 D 380749 CDS YP_002120915.1 195952625 6743035 complement(218271..219350) 1 NC_011126.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aae:aq_745 twitching motility protein PilT; twitching motility protein 219350 6743035 HY04AAS1_0245 Hydrogenobaculum sp. Y04AAS1 twitching motility protein YP_002120915.1 218271 R 380749 CDS YP_002120916.1 195952626 6743036 complement(219379..221061) 1 NC_011126.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aae:aq_1971 type IV pilus assembly protein TapB; type II secretion system protein E 221061 6743036 HY04AAS1_0246 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein E YP_002120916.1 219379 R 380749 CDS YP_002120917.1 195952627 6743039 complement(221582..222085) 1 NC_011126.1 KEGG: aae:aq_544 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 222085 6743039 HY04AAS1_0249 Hydrogenobaculum sp. Y04AAS1 hypoxanthine phosphoribosyltransferase YP_002120917.1 221582 R 380749 CDS YP_002120918.1 195952628 6743043 222513..223730 1 NC_011126.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 223730 6743043 HY04AAS1_0250 Hydrogenobaculum sp. Y04AAS1 elongation factor Tu YP_002120918.1 222513 D 380749 CDS YP_002120919.1 195952629 6743044 223741..223890 1 NC_011126.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 223890 rpmG 6743044 rpmG Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L33 YP_002120919.1 223741 D 380749 CDS YP_002120920.1 195952630 6743046 223990..224190 1 NC_011126.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: aae:aq_1930b preprotein translocase subunit SecE; preprotein translocase subunit SecE 224190 6743046 HY04AAS1_0252 Hydrogenobaculum sp. Y04AAS1 preprotein translocase subunit SecE YP_002120920.1 223990 D 380749 CDS YP_002120921.1 195952631 6743047 224187..224924 1 NC_011126.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: aae:aq_1931 transcription antitermination protein NusG; NusG antitermination factor 224924 6743047 HY04AAS1_0253 Hydrogenobaculum sp. Y04AAS1 NusG antitermination factor YP_002120921.1 224187 D 380749 CDS YP_002120922.1 195952632 6743048 224935..225372 1 NC_011126.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 225372 rplK 6743048 rplK Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L11 YP_002120922.1 224935 D 380749 CDS YP_002120923.1 195952633 6743049 225378..226103 1 NC_011126.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 226103 rplA 6743049 rplA Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L1 YP_002120923.1 225378 D 380749 CDS YP_002120924.1 195952634 6743050 226117..226653 1 NC_011126.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 226653 rplJ 6743050 rplJ Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L10 YP_002120924.1 226117 D 380749 CDS YP_002120925.1 195952635 6743051 226680..227063 1 NC_011126.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 227063 rplL 6743051 rplL Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L7/L12 YP_002120925.1 226680 D 380749 CDS YP_002120926.1 195952636 6743052 227173..231585 1 NC_011126.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 231585 rpoB 6743052 rpoB Hydrogenobaculum sp. Y04AAS1 DNA-directed RNA polymerase subunit beta YP_002120926.1 227173 D 380749 CDS YP_002120927.1 195952637 6743053 231585..236276 1 NC_011126.1 KEGG: aae:aq_1945 RNA polymerase beta prime chain; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 236276 6743053 HY04AAS1_0259 Hydrogenobaculum sp. Y04AAS1 DNA-directed RNA polymerase subunit beta' YP_002120927.1 231585 D 380749 CDS YP_002120928.1 195952638 6743054 236341..236748 1 NC_011126.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 236748 rpsL 6743054 rpsL Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S12 YP_002120928.1 236341 D 380749 CDS YP_002120929.1 195952639 6743055 236748..237230 1 NC_011126.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 237230 6743055 HY04AAS1_0261 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S7 YP_002120929.1 236748 D 380749 CDS YP_002120930.1 195952640 6743056 237245..239323 1 NC_011126.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 239323 6743056 HY04AAS1_0262 Hydrogenobaculum sp. Y04AAS1 elongation factor G YP_002120930.1 237245 D 380749 CDS YP_002120931.1 195952641 6743057 239337..240554 1 NC_011126.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 240554 6743057 HY04AAS1_0263 Hydrogenobaculum sp. Y04AAS1 elongation factor Tu YP_002120931.1 239337 D 380749 CDS YP_002120932.1 195952642 6743058 240565..240879 1 NC_011126.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 240879 rpsJ 6743058 rpsJ Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S10 YP_002120932.1 240565 D 380749 CDS YP_002120933.1 195952643 6743059 240884..241582 1 NC_011126.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 241582 rplC 6743059 rplC Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L3 YP_002120933.1 240884 D 380749 CDS YP_002120934.1 195952644 6743060 241584..242186 1 NC_011126.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 242186 rplD 6743060 rplD Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L4 YP_002120934.1 241584 D 380749 CDS YP_002120935.1 195952645 6743061 242183..242482 1 NC_011126.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 242482 rplW 6743061 rplW Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L23 YP_002120935.1 242183 D 380749 CDS YP_002120936.1 195952646 6743062 242493..243359 1 NC_011126.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 243359 rplB 6743062 rplB Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L2 YP_002120936.1 242493 D 380749 CDS YP_002120937.1 195952647 6743063 243359..243820 1 NC_011126.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 243820 rpsS 6743063 rpsS Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S19 YP_002120937.1 243359 D 380749 CDS YP_002120938.1 195952648 6743064 243830..244195 1 NC_011126.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: sul:SYO3AOP1_0286 ribosomal protein L22; 50S ribosomal protein L22 244195 6743064 HY04AAS1_0270 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L22 YP_002120938.1 243830 D 380749 CDS YP_002120939.1 195952649 6743065 244195..244890 1 NC_011126.1 KEGG: aae:aq_017 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 244890 6743065 HY04AAS1_0271 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S3 YP_002120939.1 244195 D 380749 CDS YP_002120940.1 195952650 6743066 244895..245320 1 NC_011126.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 245320 rplP 6743066 rplP Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L16 YP_002120940.1 244895 D 380749 CDS YP_002120941.1 195952651 6743067 245317..245517 1 NC_011126.1 PFAM: ribosomal protein L29; KEGG: ape:APE_0362a 50S ribosomal protein L29P; 50S ribosomal protein L29 245517 6743067 HY04AAS1_0273 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L29 YP_002120941.1 245317 D 380749 CDS YP_002120942.1 195952652 6743068 245514..245792 1 NC_011126.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 245792 rpsQ 6743068 rpsQ Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S17 YP_002120942.1 245514 D 380749 CDS YP_002120943.1 195952653 6743069 245845..246210 1 NC_011126.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 246210 rplN 6743069 rplN Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L14 YP_002120943.1 245845 D 380749 CDS YP_002120944.1 195952654 6743070 246210..246566 1 NC_011126.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 246566 rplX 6743070 rplX Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L24 YP_002120944.1 246210 D 380749 CDS YP_002120945.1 195952655 6743071 246572..247135 1 NC_011126.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 247135 rplE 6743071 rplE Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L5 YP_002120945.1 246572 D 380749 CDS YP_002120946.1 195952656 6743072 247145..247333 1 NC_011126.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 247333 rpsN 6743072 rpsN Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S14 YP_002120946.1 247145 D 380749 CDS YP_002120947.1 195952657 6743073 247345..247755 1 NC_011126.1 PFAM: ribosomal protein S8; KEGG: aae:aq_1651 30S ribosomal protein S8; 30S ribosomal protein S8 247755 6743073 HY04AAS1_0279 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S8 YP_002120947.1 247345 D 380749 CDS YP_002120948.1 195952658 6743074 247768..248313 1 NC_011126.1 PFAM: ribosomal protein L6; KEGG: sul:SYO3AOP1_0276 ribosomal protein L6; 50S ribosomal protein L6 248313 6743074 HY04AAS1_0280 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L6 YP_002120948.1 247768 D 380749 CDS YP_002120949.1 195952659 6743075 248325..248693 1 NC_011126.1 PFAM: ribosomal protein L18P/L5E; KEGG: aae:aq_1648 50S ribosomal protein L18; 50S ribosomal protein L18P/L5E 248693 6743075 HY04AAS1_0281 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L18P/L5E YP_002120949.1 248325 D 380749 CDS YP_002120950.1 195952660 6743076 248703..249272 1 NC_011126.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 249272 rpsE 6743076 rpsE Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S5 YP_002120950.1 248703 D 380749 CDS YP_002120951.1 195952661 6743077 249276..249455 1 NC_011126.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 249455 rpmD 6743077 rpmD Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L30 YP_002120951.1 249276 D 380749 CDS YP_002120952.1 195952662 6743078 249452..249910 1 NC_011126.1 PFAM: ribosomal protein L15; KEGG: aae:aq_1642 50S ribosomal protein L15; 50S ribosomal protein L15 249910 6743078 HY04AAS1_0284 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L15 YP_002120952.1 249452 D 380749 CDS YP_002120953.1 195952663 6743079 249903..251195 1 NC_011126.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 251195 secY 6743079 secY Hydrogenobaculum sp. Y04AAS1 preprotein translocase subunit SecY YP_002120953.1 249903 D 380749 CDS YP_002120954.1 195952664 6743080 251195..251830 1 NC_011126.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: sul:SYO3AOP1_0270 nucleoside-triphosphate--adenylate kinase; Nucleoside-triphosphate--adenylate kinase 251830 6743080 HY04AAS1_0286 Hydrogenobaculum sp. Y04AAS1 Nucleoside-triphosphate--adenylate kinase YP_002120954.1 251195 D 380749 CDS YP_002120955.1 195952665 6743081 251827..252600 1 NC_011126.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: aae:aq_076 methionyl aminopeptidase; methionine aminopeptidase, type I 252600 6743081 HY04AAS1_0287 Hydrogenobaculum sp. Y04AAS1 methionine aminopeptidase, type I YP_002120955.1 251827 D 380749 CDS YP_002120956.1 195952666 6743082 252602..252844 1 NC_011126.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 252844 infA 6743082 infA Hydrogenobaculum sp. Y04AAS1 translation initiation factor IF-1 YP_002120956.1 252602 D 380749 CDS YP_002120957.1 195952667 6743083 252854..252967 1 NC_011126.1 PFAM: ribosomal protein L36; KEGG: tpd:Teth39_0398 ribosomal protein L36; 50S ribosomal protein L36 252967 6743083 HY04AAS1_0289 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L36 YP_002120957.1 252854 D 380749 CDS YP_002120958.1 195952668 6743084 252982..253362 1 NC_011126.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 253362 rpsM 6743084 rpsM Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S13 YP_002120958.1 252982 D 380749 CDS YP_002120959.1 195952669 6743085 253375..253767 1 NC_011126.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 253767 6743085 HY04AAS1_0291 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S11 YP_002120959.1 253375 D 380749 CDS YP_002120960.1 195952670 6743086 253771..254394 1 NC_011126.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 254394 rpsD 6743086 rpsD Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S4 YP_002120960.1 253771 D 380749 CDS YP_002120961.1 195952671 6743087 254405..255364 1 NC_011126.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 255364 6743087 HY04AAS1_0293 Hydrogenobaculum sp. Y04AAS1 DNA-directed RNA polymerase subunit alpha YP_002120961.1 254405 D 380749 CDS YP_002120962.1 195952672 6743088 255369..255725 1 NC_011126.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 255725 rplQ 6743088 rplQ Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L17 YP_002120962.1 255369 D 380749 CDS YP_002120963.1 195952673 6743089 255722..255958 1 NC_011126.1 PFAM: protein of unknown function YGGT; KEGG: btk:BT9727_3640 hypothetical protein; hypothetical protein 255958 6743089 HY04AAS1_0295 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120963.1 255722 D 380749 CDS YP_002120964.1 195952674 6743090 255985..257292 1 NC_011126.1 KEGG: aae:aq_1720 signal recognition particle receptor protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 257292 6743090 HY04AAS1_0296 Hydrogenobaculum sp. Y04AAS1 signal recognition particle protein YP_002120964.1 255985 D 380749 CDS YP_002120965.1 195952675 6743091 257410..257646 1 NC_011126.1 PFAM: ribosomal protein S16; KEGG: aae:aq_123 30S ribosomal protein S16; 30S ribosomal protein S16 257646 6743091 HY04AAS1_0297 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S16 YP_002120965.1 257410 D 380749 CDS YP_002120966.1 195952676 6743092 257660..257899 1 NC_011126.1 KEGG: aae:aq_124a hypothetical protein; hypothetical protein 257899 6743092 HY04AAS1_0298 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120966.1 257660 D 380749 CDS YP_002120967.1 195952677 6743093 258023..259117 1 NC_011126.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sul:SYO3AOP1_0981 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase domain-containing protein 259117 6743093 HY04AAS1_0299 Hydrogenobaculum sp. Y04AAS1 DEAD/DEAH box helicase domain-containing protein YP_002120967.1 258023 D 380749 CDS YP_002120968.1 195952678 6743094 complement(259250..260029) 1 NC_011126.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pub:SAR11_0604 phosphomethylpyrimidine kinase; Phosphomethylpyrimidine kinase 260029 6743094 HY04AAS1_0300 Hydrogenobaculum sp. Y04AAS1 Phosphomethylpyrimidine kinase YP_002120968.1 259250 R 380749 CDS YP_002120969.1 195952679 6743095 complement(260026..260742) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_413 ABC transporter; ABC transporter 260742 6743095 HY04AAS1_0301 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002120969.1 260026 R 380749 CDS YP_002120970.1 195952680 6743096 complement(260748..261311) 1 NC_011126.1 KEGG: cha:CHAB381_0509 hypothetical protein; hypothetical protein 261311 6743096 HY04AAS1_0302 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120970.1 260748 R 380749 CDS YP_002120971.1 195952681 6743097 261379..262083 1 NC_011126.1 KEGG: sun:SUN_0338 hypothetical protein; hypothetical protein 262083 6743097 HY04AAS1_0303 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120971.1 261379 D 380749 CDS YP_002120972.1 195952682 6743098 262085..264298 1 NC_011126.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_7491 glycosyl transferase, family 2; type 11 methyltransferase 264298 6743098 HY04AAS1_0304 Hydrogenobaculum sp. Y04AAS1 type 11 methyltransferase YP_002120972.1 262085 D 380749 CDS YP_002120973.1 195952683 6743099 264295..264945 1 NC_011126.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: aae:aq_553 fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 264945 6743099 HY04AAS1_0305 Hydrogenobaculum sp. Y04AAS1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_002120973.1 264295 D 380749 CDS YP_002120974.1 195952684 6743100 264942..265415 1 NC_011126.1 KEGG: aae:aq_253 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 265415 6743100 HY04AAS1_0306 Hydrogenobaculum sp. Y04AAS1 pantetheine-phosphate adenylyltransferase YP_002120974.1 264942 D 380749 CDS YP_002120975.1 195952685 6743101 265542..268358 1 NC_011126.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cpb:Cphamn1_1863 molybdopterin oxidoreductase; molybdopterin oxidoreductase 268358 6743101 HY04AAS1_0307 Hydrogenobaculum sp. Y04AAS1 molybdopterin oxidoreductase YP_002120975.1 265542 D 380749 CDS YP_002120976.1 195952686 6743102 268377..269048 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cpb:Cphamn1_1864 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 269048 6743102 HY04AAS1_0308 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002120976.1 268377 D 380749 CDS YP_002120977.1 195952687 6743103 269061..269960 1 NC_011126.1 PFAM: Polysulphide reductase NrfD; KEGG: cch:Cag_0952 polysulfide reductase, subunit C; Polysulfide reductase NrfD 269960 6743103 HY04AAS1_0309 Hydrogenobaculum sp. Y04AAS1 Polysulfide reductase NrfD YP_002120977.1 269061 D 380749 CDS YP_002120978.1 195952688 6743104 269954..270919 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aoe:Clos_0209 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 270919 6743104 HY04AAS1_0310 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002120978.1 269954 D 380749 CDS YP_002120979.1 195952689 6743105 270982..272643 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_1662 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 272643 6743105 HY04AAS1_0311 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002120979.1 270982 D 380749 CDS YP_002120980.1 195952690 6743106 272640..273530 1 NC_011126.1 KEGG: aae:aq_977 hypothetical protein; hypothetical protein 273530 6743106 HY04AAS1_0312 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120980.1 272640 D 380749 CDS YP_002120981.1 195952691 6743107 complement(273500..274255) 1 NC_011126.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: aae:aq_1890 rRNA methylase; TrmH family RNA methyltransferase 274255 6743107 HY04AAS1_0313 Hydrogenobaculum sp. Y04AAS1 TrmH family RNA methyltransferase YP_002120981.1 273500 R 380749 CDS YP_002120982.1 195952692 6743108 complement(274249..274980) 1 NC_011126.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 274980 6743108 HY04AAS1_0314 Hydrogenobaculum sp. Y04AAS1 3-deoxy-manno-octulosonate cytidylyltransferase YP_002120982.1 274249 R 380749 CDS YP_002120983.1 195952693 6743109 complement(274977..275327) 1 NC_011126.1 KEGG: pho:PH0283 hypothetical protein; hypothetical protein 275327 6743109 HY04AAS1_0315 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120983.1 274977 R 380749 CDS YP_002120984.1 195952694 6743110 complement(275320..276654) 1 NC_011126.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aae:aq_128 hypothetical protein; MATE efflux family protein 276654 6743110 HY04AAS1_0316 Hydrogenobaculum sp. Y04AAS1 MATE efflux family protein YP_002120984.1 275320 R 380749 CDS YP_002120985.1 195952695 6743111 complement(276725..277393) 1 NC_011126.1 hypothetical protein 277393 6743111 HY04AAS1_0317 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120985.1 276725 R 380749 CDS YP_002120986.1 195952696 6743112 277569..277913 1 NC_011126.1 PFAM: cytochrome c class I; KEGG: pap:PSPA7_0619 cytochrome c-551 precursor; cytochrome c class I 277913 6743112 HY04AAS1_0318 Hydrogenobaculum sp. Y04AAS1 cytochrome c class I YP_002120986.1 277569 D 380749 CDS YP_002120987.1 195952697 6743113 complement(278070..279551) 1 NC_011126.1 KEGG: rso:RSc0196 cytochrome c1 signal peptide protein; hypothetical protein 279551 6743113 HY04AAS1_0319 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120987.1 278070 R 380749 CDS YP_002120988.1 195952698 6743114 279867..280178 1 NC_011126.1 PFAM: Rhodanese domain protein; KEGG: aae:aq_477 hypothetical protein; Rhodanese domain-containing protein 280178 6743114 HY04AAS1_0320 Hydrogenobaculum sp. Y04AAS1 Rhodanese domain-containing protein YP_002120988.1 279867 D 380749 CDS YP_002120989.1 195952699 6743115 280180..281046 1 NC_011126.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: aae:aq_409 aspartate carbamoyltransferase catalytic chain; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain 281046 6743115 HY04AAS1_0321 Hydrogenobaculum sp. Y04AAS1 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_002120989.1 280180 D 380749 CDS YP_002120990.1 195952700 6743116 281057..281926 1 NC_011126.1 PFAM: PSP1 domain protein; KEGG: aae:aq_1527 hypothetical protein; PSP1 domain-containing protein 281926 6743116 HY04AAS1_0322 Hydrogenobaculum sp. Y04AAS1 PSP1 domain-containing protein YP_002120990.1 281057 D 380749 CDS YP_002120991.1 195952701 6743117 281926..282498 1 NC_011126.1 PFAM: protein of unknown function DUF152; KEGG: aae:aq_167 hypothetical protein; hypothetical protein 282498 6743117 HY04AAS1_0323 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120991.1 281926 D 380749 CDS YP_002120992.1 195952702 6743118 282548..283606 1 NC_011126.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 283606 6743118 HY04AAS1_0324 Hydrogenobaculum sp. Y04AAS1 threonine synthase YP_002120992.1 282548 D 380749 CDS YP_002120993.1 195952703 6743119 complement(283603..284211) 1 NC_011126.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: aae:aq_423 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 284211 6743119 HY04AAS1_0325 Hydrogenobaculum sp. Y04AAS1 chromosome segregation and condensation protein ScpA YP_002120993.1 283603 R 380749 CDS YP_002120994.1 195952704 6743120 complement(284195..284611) 1 NC_011126.1 PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: aae:aq_1326 molybdopterin-guainine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis MobB region 284611 6743120 HY04AAS1_0326 Hydrogenobaculum sp. Y04AAS1 molybdopterin-guanine dinucleotide biosynthesis MobB region YP_002120994.1 284195 R 380749 CDS YP_002120995.1 195952705 6743121 complement(284608..285471) 1 NC_011126.1 KEGG: tma:TM1784 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 285471 6743121 HY04AAS1_0327 Hydrogenobaculum sp. Y04AAS1 acetylglutamate kinase YP_002120995.1 284608 R 380749 CDS YP_002120996.1 195952706 6743122 complement(285482..286843) 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aae:aq_736 dihydrolipoamide dehydrogenase; pyridine nucleotide-disulfide oxidoreductase dimerisation protein 286843 6743122 HY04AAS1_0328 Hydrogenobaculum sp. Y04AAS1 pyridine nucleotide-disulfide oxidoreductase dimerisation protein YP_002120996.1 285482 R 380749 CDS YP_002120997.1 195952707 6743123 complement(286830..287075) 1 NC_011126.1 hypothetical protein 287075 6743123 HY04AAS1_0329 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120997.1 286830 R 380749 CDS YP_002120998.1 195952708 6743124 complement(287075..288250) 1 NC_011126.1 PFAM: peptidase M16 domain protein; KEGG: aae:aq_2204 processing protease; peptidase M16 domain-containing protein 288250 6743124 HY04AAS1_0330 Hydrogenobaculum sp. Y04AAS1 peptidase M16 domain-containing protein YP_002120998.1 287075 R 380749 CDS YP_002120999.1 195952709 6743125 complement(288253..289302) 1 NC_011126.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bph:Bphy_1271 tetratricopeptide TPR_2 repeat protein; hypothetical protein 289302 6743125 HY04AAS1_0331 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002120999.1 288253 R 380749 CDS YP_002121000.1 195952710 6743126 complement(289299..289442) 1 NC_011126.1 hypothetical protein 289442 6743126 HY04AAS1_0332 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121000.1 289299 R 380749 CDS YP_002121001.1 195952711 6743127 complement(289439..290113) 1 NC_011126.1 PFAM: PspA/IM30 family protein; KEGG: bte:BTH_I2081 PspA/IM30 family superfamily; phage shock protein A, PspA 290113 6743127 HY04AAS1_0333 Hydrogenobaculum sp. Y04AAS1 phage shock protein A, PspA YP_002121001.1 289439 R 380749 CDS YP_002121002.1 195952712 6743128 complement(290169..290483) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1250 alkylmercury lyase; alkylmercury lyase 290483 6743128 HY04AAS1_0334 Hydrogenobaculum sp. Y04AAS1 alkylmercury lyase YP_002121002.1 290169 R 380749 CDS YP_002121003.1 195952713 6743129 complement(290626..291294) 1 NC_011126.1 KEGG: nph:NP2586A probable anaerobic dehydrogenase subunit; hypothetical protein 291294 6743129 HY04AAS1_0335 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121003.1 290626 R 380749 CDS YP_002121004.1 195952714 6743130 complement(291296..292147) 1 NC_011126.1 KEGG: pas:Pars_0497 nitrate reductase subunit, conjectural; hypothetical protein 292147 6743130 HY04AAS1_0336 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121004.1 291296 R 380749 CDS YP_002121005.1 195952715 6743131 complement(292159..293307) 1 NC_011126.1 KEGG: nph:NP2584A anaerobic dehydrogenase subunit (probable iron-sulfur protein); Selenate reductase 293307 6743131 HY04AAS1_0337 Hydrogenobaculum sp. Y04AAS1 Selenate reductase YP_002121005.1 292159 R 380749 CDS YP_002121006.1 195952716 6743132 complement(293328..296792) 1 NC_011126.1 PFAM: molybdopterin oxidoreductase; KEGG: dar:Daro_2584 molybdopterin oxidoreductase:molydopterin dinucleotide-binding region; molybdopterin oxidoreductase 296792 6743132 HY04AAS1_0338 Hydrogenobaculum sp. Y04AAS1 molybdopterin oxidoreductase YP_002121006.1 293328 R 380749 CDS YP_002121007.1 195952717 6743133 297010..298656 1 NC_011126.1 PFAM: cytochrome d1 heme region; KEGG: sul:SYO3AOP1_0462 hydroxylamine reductase; Hydroxylamine reductase 298656 6743133 HY04AAS1_0339 Hydrogenobaculum sp. Y04AAS1 Hydroxylamine reductase YP_002121007.1 297010 D 380749 CDS YP_002121008.1 195952718 6743134 298658..300331 1 NC_011126.1 PFAM: cytochrome c class I; cytochrome d1 heme region; KEGG: sul:SYO3AOP1_0461 cytochrome d1 heme region; cytochrome d1 heme region 300331 6743134 HY04AAS1_0340 Hydrogenobaculum sp. Y04AAS1 cytochrome d1 heme region YP_002121008.1 298658 D 380749 CDS YP_002121009.1 195952719 6743135 300331..301407 1 NC_011126.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sul:SYO3AOP1_0459 radical SAM domain protein; Radical SAM domain-containing protein 301407 6743135 HY04AAS1_0341 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121009.1 300331 D 380749 CDS YP_002121010.1 195952720 6743136 301395..302474 1 NC_011126.1 PFAM: cytochrome d1 heme region; KEGG: sun:SUN_0249 heme d1 biosynthesis protein NirF; cytochrome d1 heme region 302474 6743136 HY04AAS1_0342 Hydrogenobaculum sp. Y04AAS1 cytochrome d1 heme region YP_002121010.1 301395 D 380749 CDS YP_002121011.1 195952721 6743137 302467..303213 1 NC_011126.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sul:SYO3AOP1_0051 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 303213 6743137 HY04AAS1_0343 Hydrogenobaculum sp. Y04AAS1 uroporphyrin-III C-methyltransferase YP_002121011.1 302467 D 380749 CDS YP_002121012.1 195952722 6743138 303201..304214 1 NC_011126.1 KEGG: nis:NIS_1776 transcriptional regulator, AsnC/Lrp family; AsnC family transcriptional regulator 304214 6743138 HY04AAS1_0344 Hydrogenobaculum sp. Y04AAS1 AsnC family transcriptional regulator YP_002121012.1 303201 D 380749 CDS YP_002121013.1 195952723 6743139 complement(304211..304759) 1 NC_011126.1 TIGRFAM: siroheme synthase; KEGG: aae:aq_1237 precorrin-2 oxidase / ferrochelatase; siroheme synthase 304759 6743139 HY04AAS1_0345 Hydrogenobaculum sp. Y04AAS1 siroheme synthase YP_002121013.1 304211 R 380749 CDS YP_002121014.1 195952724 6743140 304865..305149 1 NC_011126.1 KEGG: sul:SYO3AOP1_0468 hypothetical protein; hypothetical protein 305149 6743140 HY04AAS1_0346 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121014.1 304865 D 380749 CDS YP_002121015.1 195952725 6743141 305146..306369 1 NC_011126.1 KEGG: sul:SYO3AOP1_0467 hypothetical protein; hypothetical protein 306369 6743141 HY04AAS1_0347 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121015.1 305146 D 380749 CDS YP_002121016.1 195952726 6743142 306379..306669 1 NC_011126.1 PFAM: protein of unknown function DUF59; KEGG: ccv:CCV52592_1842 YitW; hypothetical protein 306669 6743142 HY04AAS1_0348 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121016.1 306379 D 380749 CDS YP_002121017.1 195952727 6743143 complement(306675..307334) 1 NC_011126.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: sul:SYO3AOP1_0465 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 307334 6743143 HY04AAS1_0349 Hydrogenobaculum sp. Y04AAS1 Crp/Fnr family transcriptional regulator YP_002121017.1 306675 R 380749 CDS YP_002121018.1 195952728 6743144 307452..307853 1 NC_011126.1 KEGG: sul:SYO3AOP1_0471 hypothetical protein; hypothetical protein 307853 6743144 HY04AAS1_0350 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121018.1 307452 D 380749 CDS YP_002121019.1 195952729 6743145 307876..310122 1 NC_011126.1 PFAM: cytochrome c oxidase subunit I; KEGG: sul:SYO3AOP1_0472 nitric-oxide reductase; Nitric-oxide reductase 310122 6743145 HY04AAS1_0351 Hydrogenobaculum sp. Y04AAS1 Nitric-oxide reductase YP_002121019.1 307876 D 380749 CDS YP_002121020.1 195952730 6743146 310247..311593 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 311593 6743146 HY04AAS1_0352 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121020.1 310247 D 380749 CDS YP_002121021.1 195952731 6743147 complement(311684..312259) 1 NC_011126.1 PFAM: regulatory protein TetR; KEGG: aae:aq_2179 transcriptional regulator (TetR/AcrR family); TetR family transcriptional regulator 312259 6743147 HY04AAS1_0353 Hydrogenobaculum sp. Y04AAS1 TetR family transcriptional regulator YP_002121021.1 311684 R 380749 CDS YP_002121022.1 195952732 6743148 complement(312285..313043) 1 NC_011126.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: aae:aq_311 protein-L-isoaspartate O-methyltransferase; tRNA methyltransferase complex GCD14 subunit 313043 6743148 HY04AAS1_0354 Hydrogenobaculum sp. Y04AAS1 tRNA methyltransferase complex GCD14 subunit YP_002121022.1 312285 R 380749 CDS YP_002121023.1 195952733 6743149 complement(313043..313489) 1 NC_011126.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aae:aq_1363 acetyl-CoA carboxylase biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 313489 6743149 HY04AAS1_0355 Hydrogenobaculum sp. Y04AAS1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002121023.1 313043 R 380749 CDS YP_002121024.1 195952734 6743150 complement(313491..314075) 1 NC_011126.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 314075 6743150 HY04AAS1_0356 Hydrogenobaculum sp. Y04AAS1 elongation factor P YP_002121024.1 313491 R 380749 CDS YP_002121025.1 195952735 6743151 complement(314068..314823) 1 NC_011126.1 PFAM: protein of unknown function DUF815; KEGG: gur:Gura_2054 protein of unknown function DUF815; hypothetical protein 314823 6743151 HY04AAS1_0357 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121025.1 314068 R 380749 CDS YP_002121026.1 195952736 6743152 complement(314820..315692) 1 NC_011126.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 315692 6743152 HY04AAS1_0358 Hydrogenobaculum sp. Y04AAS1 dihydrodipicolinate synthase YP_002121026.1 314820 R 380749 CDS YP_002121027.1 195952737 6743153 complement(315729..317210) 1 NC_011126.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: aae:aq_1257 methionyl-tRNA synthetase alpha subunit; methionyl-tRNA synthetase 317210 6743153 HY04AAS1_0359 Hydrogenobaculum sp. Y04AAS1 methionyl-tRNA synthetase YP_002121027.1 315729 R 380749 CDS YP_002121028.1 195952738 6743154 317266..317673 1 NC_011126.1 KEGG: cpy:Cphy_3203 hypothetical protein; hypothetical protein 317673 6743154 HY04AAS1_0360 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121028.1 317266 D 380749 CDS YP_002121029.1 195952739 6743155 complement(317670..317957) 1 NC_011126.1 PFAM: protein of unknown function DUF503; KEGG: sul:SYO3AOP1_0859 protein of unknown function DUF503; hypothetical protein 317957 6743155 HY04AAS1_0361 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121029.1 317670 R 380749 CDS YP_002121030.1 195952740 6743156 complement(317994..318443) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sul:SYO3AOP1_0957 TPR repeat-containing protein; hypothetical protein 318443 6743156 HY04AAS1_0362 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121030.1 317994 R 380749 CDS YP_002121031.1 195952741 6743157 complement(318440..319468) 1 NC_011126.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 319468 mnmA 6743157 mnmA Hydrogenobaculum sp. Y04AAS1 tRNA-specific 2-thiouridylase MnmA YP_002121031.1 318440 R 380749 CDS YP_002121032.1 195952742 6743158 complement(319471..319911) 1 NC_011126.1 KEGG: aae:aq_1811 thioredoxin; thioredoxin 319911 6743158 HY04AAS1_0364 Hydrogenobaculum sp. Y04AAS1 thioredoxin YP_002121032.1 319471 R 380749 CDS YP_002121033.1 195952743 6743159 complement(319908..320648) 1 NC_011126.1 PFAM: protein of unknown function DUF140; KEGG: aae:aq_355 ABC transport system permease protein; hypothetical protein 320648 6743159 HY04AAS1_0365 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121033.1 319908 R 380749 CDS YP_002121034.1 195952744 6743160 complement(320651..321547) 1 NC_011126.1 KEGG: tdn:Tmden_1128 hypothetical protein; hypothetical protein 321547 6743160 HY04AAS1_0366 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121034.1 320651 R 380749 CDS YP_002121035.1 195952745 6743161 321583..322464 1 NC_011126.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_2356 protein of unknown function DUF6, transmembrane; hypothetical protein 322464 6743161 HY04AAS1_0367 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121035.1 321583 D 380749 CDS YP_002121036.1 195952746 6743162 complement(322467..323438) 1 NC_011126.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: aae:aq_1069 UDP-glucose-4-epimerase; UDP-glucose 4-epimerase 323438 6743162 HY04AAS1_0368 Hydrogenobaculum sp. Y04AAS1 UDP-glucose 4-epimerase YP_002121036.1 322467 R 380749 CDS YP_002121037.1 195952747 6743163 complement(323439..323885) 1 NC_011126.1 KEGG: aae:aq_1138 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase B 323885 6743163 HY04AAS1_0369 Hydrogenobaculum sp. Y04AAS1 ribose 5-phosphate isomerase B YP_002121037.1 323439 R 380749 CDS YP_002121038.1 195952748 6743164 complement(323882..325288) 1 NC_011126.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 325288 gatB 6743164 gatB Hydrogenobaculum sp. Y04AAS1 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002121038.1 323882 R 380749 CDS YP_002121039.1 195952749 6743165 325358..327658 1 NC_011126.1 PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: aae:aq_980 DNA gyrase A subunit; DNA topoisomerase 327658 6743165 HY04AAS1_0371 Hydrogenobaculum sp. Y04AAS1 DNA topoisomerase YP_002121039.1 325358 D 380749 CDS YP_002121040.1 195952750 6743166 327655..328920 1 NC_011126.1 KEGG: aae:aq_298 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 328920 6743166 HY04AAS1_0372 Hydrogenobaculum sp. Y04AAS1 seryl-tRNA synthetase YP_002121040.1 327655 D 380749 CDS YP_002121041.1 195952751 6743167 328917..329495 1 NC_011126.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 329495 hisB 6743167 hisB Hydrogenobaculum sp. Y04AAS1 imidazoleglycerol-phosphate dehydratase YP_002121041.1 328917 D 380749 CDS YP_002121042.1 195952752 6743168 329492..330463 1 NC_011126.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: aae:aq_534 ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 330463 6743168 HY04AAS1_0374 Hydrogenobaculum sp. Y04AAS1 ADP-ribosylation/Crystallin J1 YP_002121042.1 329492 D 380749 CDS YP_002121043.1 195952753 6743169 330478..331488 1 NC_011126.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 331488 6743169 HY04AAS1_0375 Hydrogenobaculum sp. Y04AAS1 rod shape-determining protein MreB YP_002121043.1 330478 D 380749 CDS YP_002121044.1 195952754 6743170 331485..332258 1 NC_011126.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 332258 6743170 HY04AAS1_0376 Hydrogenobaculum sp. Y04AAS1 rod shape-determining protein MreC YP_002121044.1 331485 D 380749 CDS YP_002121045.1 195952755 6743171 332255..332695 1 NC_011126.1 KEGG: tpd:Teth39_1450 hypothetical protein; hypothetical protein 332695 6743171 HY04AAS1_0377 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121045.1 332255 D 380749 CDS YP_002121046.1 195952756 6743172 332692..334452 1 NC_011126.1 KEGG: aae:aq_1189 penicillin binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 334452 6743172 HY04AAS1_0378 Hydrogenobaculum sp. Y04AAS1 penicillin-binding protein 2 YP_002121046.1 332692 D 380749 CDS YP_002121047.1 195952757 6743173 334476..335048 1 NC_011126.1 PFAM: electron transport protein SCO1/SenC; KEGG: aae:aq_988 hypothetical protein; electron transport protein SCO1/SenC 335048 6743173 HY04AAS1_0379 Hydrogenobaculum sp. Y04AAS1 electron transport protein SCO1/SenC YP_002121047.1 334476 D 380749 CDS YP_002121048.1 195952758 6743174 335104..335295 1 NC_011126.1 hypothetical protein 335295 6743174 HY04AAS1_0380 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121048.1 335104 D 380749 CDS YP_002121049.1 195952759 6743175 335292..335993 1 NC_011126.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sul:SYO3AOP1_1480 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 335993 6743175 HY04AAS1_0381 Hydrogenobaculum sp. Y04AAS1 winged helix family two component transcriptional regulator YP_002121049.1 335292 D 380749 CDS YP_002121050.1 195952760 6743176 335984..337147 1 NC_011126.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pmo:Pmob_0869 histidine kinase; integral membrane sensor signal transduction histidine kinase 337147 6743176 HY04AAS1_0382 Hydrogenobaculum sp. Y04AAS1 integral membrane sensor signal transduction histidine kinase YP_002121050.1 335984 D 380749 CDS YP_002121051.1 195952761 6743177 complement(337144..338205) 1 NC_011126.1 PFAM: protein of unknown function UPF0118; KEGG: aae:aq_740 hypothetical protein; hypothetical protein 338205 6743177 HY04AAS1_0383 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121051.1 337144 R 380749 CDS YP_002121052.1 195952762 6743178 complement(338189..338743) 1 NC_011126.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: aae:aq_1815 GTP-binding protein; small GTP-binding protein 338743 6743178 HY04AAS1_0384 Hydrogenobaculum sp. Y04AAS1 small GTP-binding protein YP_002121052.1 338189 R 380749 CDS YP_002121053.1 195952763 6743179 complement(338740..339915) 1 NC_011126.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 339915 6743179 HY04AAS1_0385 Hydrogenobaculum sp. Y04AAS1 tryptophanyl-tRNA synthetase YP_002121053.1 338740 R 380749 CDS YP_002121054.1 195952764 6743180 complement(339912..340574) 1 NC_011126.1 PFAM: peptidase M50; KEGG: aae:aq_1853 hypothetical protein; peptidase M50 340574 6743180 HY04AAS1_0386 Hydrogenobaculum sp. Y04AAS1 peptidase M50 YP_002121054.1 339912 R 380749 CDS YP_002121055.1 195952765 6743181 complement(340574..341287) 1 NC_011126.1 PFAM: protein of unknown function DUF164; KEGG: aae:aq_1223 hypothetical protein; hypothetical protein 341287 6743181 HY04AAS1_0387 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121055.1 340574 R 380749 CDS YP_002121056.1 195952766 6743182 complement(341318..342337) 1 NC_011126.1 PFAM: Radical SAM domain protein; KEGG: aae:aq_1861 [pyruvate formate-lyase] activating enzyme; Radical SAM domain-containing protein 342337 6743182 HY04AAS1_0388 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121056.1 341318 R 380749 CDS YP_002121057.1 195952767 6743183 complement(342387..342770) 1 NC_011126.1 PFAM: thioesterase superfamily protein; KEGG: sul:SYO3AOP1_1702 thioesterase superfamily protein; thioesterase superfamily protein 342770 6743183 HY04AAS1_0389 Hydrogenobaculum sp. Y04AAS1 thioesterase superfamily protein YP_002121057.1 342387 R 380749 CDS YP_002121058.1 195952768 6743184 complement(342767..343615) 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: ppr:PBPRB1868 hypothetical chemotaxis transducer; methyl-accepting chemotaxis sensory transducer 343615 6743184 HY04AAS1_0390 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002121058.1 342767 R 380749 CDS YP_002121059.1 195952769 6743185 complement(343627..344406) 1 NC_011126.1 PFAM: beta-lactamase domain protein; KEGG: fno:Fnod_0356 beta-lactamase domain protein; beta-lactamase domain-containing protein 344406 6743185 HY04AAS1_0391 Hydrogenobaculum sp. Y04AAS1 beta-lactamase domain-containing protein YP_002121059.1 343627 R 380749 CDS YP_002121060.1 195952770 6743186 complement(344481..345179) 1 NC_011126.1 KEGG: cbk:CLL_A3034 hypothetical protein; hypothetical protein 345179 6743186 HY04AAS1_0392 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121060.1 344481 R 380749 CDS YP_002121061.1 195952771 6743187 complement(345173..346366) 1 NC_011126.1 PFAM: Radical SAM domain protein; KEGG: abu:Abu_0826 hypothetical protein; Radical SAM domain-containing protein 346366 6743187 HY04AAS1_0393 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121061.1 345173 R 380749 CDS YP_002121062.1 195952772 6743188 complement(346405..347463) 1 NC_011126.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: pho:PH0483 chemotaxis-specific methylesterase; response regulator receiver modulated CheB methylesterase 347463 6743188 HY04AAS1_0394 Hydrogenobaculum sp. Y04AAS1 response regulator receiver modulated CheB methylesterase YP_002121062.1 346405 R 380749 CDS YP_002121063.1 195952773 6743189 complement(347469..348239) 1 NC_011126.1 KEGG: aae:aq_2195 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 348239 6743189 HY04AAS1_0395 Hydrogenobaculum sp. Y04AAS1 undecaprenol kinase YP_002121063.1 347469 R 380749 CDS YP_002121064.1 195952774 6743190 complement(348236..348748) 1 NC_011126.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: sul:SYO3AOP1_0206 lipopolysaccharide transport periplasmic protein LptA; lipopolysaccharide transport periplasmic protein LptA 348748 6743190 HY04AAS1_0396 Hydrogenobaculum sp. Y04AAS1 lipopolysaccharide transport periplasmic protein LptA YP_002121064.1 348236 R 380749 CDS YP_002121065.1 195952775 6743191 complement(348738..349241) 1 NC_011126.1 PFAM: protein of unknown function DUF1239; KEGG: aae:aq_2172 protein; hypothetical protein 349241 6743191 HY04AAS1_0397 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121065.1 348738 R 380749 CDS YP_002121066.1 195952776 6743192 complement(349261..349503) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0809 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 349503 6743192 HY04AAS1_0398 Hydrogenobaculum sp. Y04AAS1 iron-sulfur cluster-binding protein YP_002121066.1 349261 R 380749 CDS YP_002121067.1 195952777 6743193 349551..350006 1 NC_011126.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_1370 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 350006 6743193 HY04AAS1_0399 Hydrogenobaculum sp. Y04AAS1 MotA/TolQ/ExbB proton channel YP_002121067.1 349551 D 380749 CDS YP_002121068.1 195952778 6743194 349993..350388 1 NC_011126.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sul:SYO3AOP1_1369 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 350388 6743194 HY04AAS1_0400 Hydrogenobaculum sp. Y04AAS1 Biopolymer transport protein ExbD/TolR YP_002121068.1 349993 D 380749 CDS YP_002121069.1 195952779 6743195 350385..351209 1 NC_011126.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sul:SYO3AOP1_1368 TonB family protein; TonB family protein 351209 6743195 HY04AAS1_0401 Hydrogenobaculum sp. Y04AAS1 TonB family protein YP_002121069.1 350385 D 380749 CDS YP_002121070.1 195952780 6743196 complement(351206..351457) 1 NC_011126.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: sul:SYO3AOP1_1302 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 351457 6743196 HY04AAS1_0402 Hydrogenobaculum sp. Y04AAS1 nitrogen-fixing NifU domain-containing protein YP_002121070.1 351206 R 380749 CDS YP_002121071.1 195952781 6743197 complement(351470..351697) 1 NC_011126.1 KEGG: aae:aq_900 protein; hypothetical protein 351697 6743197 HY04AAS1_0403 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121071.1 351470 R 380749 CDS YP_002121072.1 195952782 6743198 complement(351707..351952) 1 NC_011126.1 PFAM: SirA family protein; KEGG: sul:SYO3AOP1_1300 SirA family protein; SirA family protein 351952 6743198 HY04AAS1_0404 Hydrogenobaculum sp. Y04AAS1 SirA family protein YP_002121072.1 351707 R 380749 CDS YP_002121073.1 195952783 6743199 complement(351942..352979) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1299 thiamine biosynthesis protein; thiamine biosynthesis protein 352979 6743199 HY04AAS1_0405 Hydrogenobaculum sp. Y04AAS1 thiamine biosynthesis protein YP_002121073.1 351942 R 380749 CDS YP_002121074.1 195952784 6743200 complement(352981..353445) 1 NC_011126.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: aae:aq_896 NifU protein; nitrogen-fixing NifU domain-containing protein 353445 6743200 HY04AAS1_0406 Hydrogenobaculum sp. Y04AAS1 nitrogen-fixing NifU domain-containing protein YP_002121074.1 352981 R 380749 CDS YP_002121075.1 195952785 6743201 complement(353528..354538) 1 NC_011126.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 354538 6743201 HY04AAS1_0407 Hydrogenobaculum sp. Y04AAS1 phosphoribosylaminoimidazole synthetase YP_002121075.1 353528 R 380749 CDS YP_002121076.1 195952786 6743202 complement(354535..355104) 1 NC_011126.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: aae:aq_768 hypothetical protein; 2'-5' RNA ligase 355104 6743202 HY04AAS1_0408 Hydrogenobaculum sp. Y04AAS1 2'-5' RNA ligase YP_002121076.1 354535 R 380749 CDS YP_002121077.1 195952787 6743203 complement(355101..355313) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1219 hypothetical protein; hypothetical protein 355313 6743203 HY04AAS1_0409 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121077.1 355101 R 380749 CDS YP_002121078.1 195952788 6743204 355375..356382 1 NC_011126.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: aae:aq_1866 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 356382 6743204 HY04AAS1_0410 Hydrogenobaculum sp. Y04AAS1 aspartate-semialdehyde dehydrogenase YP_002121078.1 355375 D 380749 CDS YP_002121079.1 195952789 6743205 356369..356719 1 NC_011126.1 KEGG: sul:SYO3AOP1_0749 hypothetical protein; hypothetical protein 356719 6743205 HY04AAS1_0411 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121079.1 356369 D 380749 CDS YP_002121080.1 195952790 6743206 356697..357623 1 NC_011126.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: bce:BC2482 hypothetical cytosolic protein; hypothetical protein 357623 6743206 HY04AAS1_0412 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121080.1 356697 D 380749 CDS YP_002121081.1 195952791 6743207 357620..358036 1 NC_011126.1 KEGG: sul:SYO3AOP1_0714 hypothetical protein; hypothetical protein 358036 6743207 HY04AAS1_0413 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121081.1 357620 D 380749 CDS YP_002121082.1 195952792 6743208 358046..359665 1 NC_011126.1 KEGG: aae:aq_923 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 359665 6743208 HY04AAS1_0414 Hydrogenobaculum sp. Y04AAS1 arginyl-tRNA synthetase YP_002121082.1 358046 D 380749 CDS YP_002121083.1 195952793 6743209 359738..360469 1 NC_011126.1 KEGG: afw:Anae109_3615 hypothetical protein; hypothetical protein 360469 6743209 HY04AAS1_0415 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121083.1 359738 D 380749 CDS YP_002121084.1 195952794 6743210 360924..361532 1 NC_011126.1 KEGG: aae:aq_629 chromosome assembly protein homolog; hypothetical protein 361532 6743210 HY04AAS1_0416 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121084.1 360924 D 380749 CDS YP_002121085.1 195952795 6743211 complement(361552..362142) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1438 DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 362142 6743211 HY04AAS1_0417 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunit epsilon YP_002121085.1 361552 R 380749 CDS YP_002121086.1 195952796 6743212 complement(362156..363106) 1 NC_011126.1 PFAM: SurA domain; KEGG: aae:aq_1694 hypothetical peptidylprolyl isomerase; SurA domain 363106 6743212 HY04AAS1_0418 Hydrogenobaculum sp. Y04AAS1 SurA domain YP_002121086.1 362156 R 380749 CDS YP_002121087.1 195952797 6743213 complement(363142..364404) 1 NC_011126.1 PFAM: CBS domain containing protein; KEGG: aae:aq_040 hypothetical protein; CBS domain containing protein 364404 6743213 HY04AAS1_0419 Hydrogenobaculum sp. Y04AAS1 CBS domain containing protein YP_002121087.1 363142 R 380749 CDS YP_002121088.1 195952798 6743214 complement(364391..364960) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1161 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 364960 6743214 HY04AAS1_0420 Hydrogenobaculum sp. Y04AAS1 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_002121088.1 364391 R 380749 CDS YP_002121089.1 195952799 6743215 complement(364951..365754) 1 NC_011126.1 PFAM: protein of unknown function DUF72; KEGG: aae:aq_1408 hypothetical protein; hypothetical protein 365754 6743215 HY04AAS1_0421 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121089.1 364951 R 380749 CDS YP_002121090.1 195952800 6743216 complement(365751..366950) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1394 hypothetical protein; hypothetical protein 366950 6743216 HY04AAS1_0422 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121090.1 365751 R 380749 CDS YP_002121091.1 195952801 6743217 complement(366931..367908) 1 NC_011126.1 KEGG: aae:aq_288 hypothetical gluconokinase; glucokinase 367908 6743217 HY04AAS1_0423 Hydrogenobaculum sp. Y04AAS1 glucokinase YP_002121091.1 366931 R 380749 CDS YP_002121092.1 195952802 6743218 complement(367901..369769) 1 NC_011126.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_437 NADH dehydrogenase I chain G; ferredoxin 369769 6743218 HY04AAS1_0424 Hydrogenobaculum sp. Y04AAS1 ferredoxin YP_002121092.1 367901 R 380749 CDS YP_002121093.1 195952803 6743219 complement(369756..370433) 1 NC_011126.1 KEGG: aae:aq_1580 orotidine-5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 370433 6743219 HY04AAS1_0425 Hydrogenobaculum sp. Y04AAS1 orotidine 5'-phosphate decarboxylase YP_002121093.1 369756 R 380749 CDS YP_002121094.1 195952804 6743220 complement(370426..371277) 1 NC_011126.1 PFAM: protein of unknown function DUF86; KEGG: aae:aq_1668 hypothetical protein; hypothetical protein 371277 6743220 HY04AAS1_0426 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121094.1 370426 R 380749 CDS YP_002121095.1 195952805 6743221 complement(371322..373154) 1 NC_011126.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 373154 6743221 HY04AAS1_0427 Hydrogenobaculum sp. Y04AAS1 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002121095.1 371322 R 380749 CDS YP_002121096.1 195952806 6743222 complement(373160..373687) 1 NC_011126.1 KEGG: aae:aq_1343 hypothetical protein; hypothetical protein 373687 6743222 HY04AAS1_0428 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121096.1 373160 R 380749 CDS YP_002121097.1 195952807 6743223 complement(373684..374856) 1 NC_011126.1 PFAM: aminotransferase class I and II; KEGG: aae:aq_1969 aspartate aminotransferase; class I and II aminotransferase 374856 6743223 HY04AAS1_0429 Hydrogenobaculum sp. Y04AAS1 class I and II aminotransferase YP_002121097.1 373684 R 380749 CDS YP_002121098.1 195952808 6743224 complement(374871..375536) 1 NC_011126.1 PFAM: sugar fermentation stimulation protein; KEGG: aae:aq_057 sugar fermentation stimulation protein; sugar fermentation stimulation protein 375536 6743224 HY04AAS1_0430 Hydrogenobaculum sp. Y04AAS1 sugar fermentation stimulation protein YP_002121098.1 374871 R 380749 CDS YP_002121099.1 195952809 6743225 complement(375526..377571) 1 NC_011126.1 KEGG: tva:TVAG_355490 viral A-type inclusion protein, Pfam: ASD2 Myosin_tail_1 TBPIP BRE1 OmpH DMPK_coil HR1 DUF904 Rad50_zn_hook Exonuc_VII_S Prefoldin_2 Snf7 CDC37_N ATG16 BAR Rab5-bind bZIP_1 EzrA DUF593 TPR_MLP1_2 FlaC_arch Laminin_I Prefoldin GBP_C PspA_IM30 KNOX2 Tropomyosin Macscav_rec DUF1978 Spectrin Cob_adeno_trans Prp19 SMC_Nse1 Apolipoprotein Filament CHASE3 Baculo_PEP_C DREPP HALZ Vicilin_N GRIP PROSITE: ASN_RICH GLU_RICH; hypothetical protein 377571 6743225 HY04AAS1_0431 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121099.1 375526 R 380749 CDS YP_002121100.1 195952810 6743226 377624..378676 1 NC_011126.1 PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1199 glycosyl transferase group 1; group 1 glycosyl transferase 378676 6743226 HY04AAS1_0432 Hydrogenobaculum sp. Y04AAS1 group 1 glycosyl transferase YP_002121100.1 377624 D 380749 CDS YP_002121101.1 195952811 6743227 378686..379327 1 NC_011126.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: aae:aq_2058 2-acylglycerophosphoethanolamine acyltransferase; phospholipid/glycerol acyltransferase 379327 6743227 HY04AAS1_0433 Hydrogenobaculum sp. Y04AAS1 phospholipid/glycerol acyltransferase YP_002121101.1 378686 D 380749 CDS YP_002121102.1 195952812 6743228 complement(379320..379934) 1 NC_011126.1 PFAM: protein of unknown function UPF0126; KEGG: sul:SYO3AOP1_0167 protein of unknown function UPF0126; hypothetical protein 379934 6743228 HY04AAS1_0434 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121102.1 379320 R 380749 CDS YP_002121103.1 195952813 6743229 complement(379927..381300) 1 NC_011126.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 381300 6743229 HY04AAS1_0435 Hydrogenobaculum sp. Y04AAS1 tRNA (uracil-5-)-methyltransferase Gid YP_002121103.1 379927 R 380749 CDS YP_002121104.1 195952814 6743230 381329..382177 1 NC_011126.1 KEGG: aae:aq_1155 ATP phosphoribosyltransferase regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 382177 6743230 HY04AAS1_0436 Hydrogenobaculum sp. Y04AAS1 ATP phosphoribosyltransferase regulatory subunit YP_002121104.1 381329 D 380749 CDS YP_002121105.1 195952815 6743231 complement(382178..384220) 1 NC_011126.1 PFAM: Organic solvent tolerance protein; KEGG: aae:aq_967 organic solvent tolerance protein; Organic solvent tolerance protein 384220 6743231 HY04AAS1_0437 Hydrogenobaculum sp. Y04AAS1 Organic solvent tolerance protein YP_002121105.1 382178 R 380749 CDS YP_002121106.1 195952816 6743232 complement(384226..385002) 1 NC_011126.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; KEGG: aae:aq_966 4-nitrophenylphosphatase; HAD-superfamily hydrolase 385002 6743232 HY04AAS1_0438 Hydrogenobaculum sp. Y04AAS1 HAD-superfamily hydrolase YP_002121106.1 384226 R 380749 CDS YP_002121107.1 195952817 6743233 385026..385448 1 NC_011126.1 KEGG: ehi:EHI_049640 phospholipid-transporting P-type ATPase; hypothetical protein 385448 6743233 HY04AAS1_0439 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121107.1 385026 D 380749 CDS YP_002121108.1 195952818 6743234 385471..385704 1 NC_011126.1 KEGG: tdn:Tmden_0906 protein of unknown function DUF465; hypothetical protein 385704 6743234 HY04AAS1_0440 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121108.1 385471 D 380749 CDS YP_002121109.1 195952819 6743235 385701..386198 1 NC_011126.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: aae:aq_1398 3-isopropylmalate dehydratase small subunit; 3-isopropylmalate dehydratase, small subunit 386198 6743235 HY04AAS1_0441 Hydrogenobaculum sp. Y04AAS1 3-isopropylmalate dehydratase, small subunit YP_002121109.1 385701 D 380749 CDS YP_002121110.1 195952820 6743236 386173..386727 1 NC_011126.1 KEGG: aae:aq_1907 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 386727 6743236 HY04AAS1_0442 Hydrogenobaculum sp. Y04AAS1 orotate phosphoribosyltransferase YP_002121110.1 386173 D 380749 CDS YP_002121111.1 195952821 6743237 386724..387464 1 NC_011126.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: aae:aq_773 hemolysin; hemolysin A 387464 6743237 HY04AAS1_0443 Hydrogenobaculum sp. Y04AAS1 hemolysin A YP_002121111.1 386724 D 380749 CDS YP_002121112.1 195952822 6743238 387461..390007 1 NC_011126.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: aae:aq_624 penicillin binding protein 1A; penicillin-binding protein, 1A family 390007 6743238 HY04AAS1_0444 Hydrogenobaculum sp. Y04AAS1 penicillin-binding protein, 1A family YP_002121112.1 387461 D 380749 CDS YP_002121113.1 195952823 6743239 389997..390755 1 NC_011126.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: aae:aq_181 imidazoleglycerol-phosphate synthase cyclase; imidazoleglycerol phosphate synthase, cyclase subunit 390755 6743239 HY04AAS1_0445 Hydrogenobaculum sp. Y04AAS1 imidazoleglycerol phosphate synthase, cyclase subunit YP_002121113.1 389997 D 380749 CDS YP_002121114.1 195952824 6743240 complement(390809..391393) 1 NC_011126.1 PFAM: membrane-flanked domain; KEGG: cau:Caur_2925 membrane-flanked domain; membrane-flanked domain-containing protein 391393 6743240 HY04AAS1_0446 Hydrogenobaculum sp. Y04AAS1 membrane-flanked domain-containing protein YP_002121114.1 390809 R 380749 CDS YP_002121115.1 195952825 6743241 complement(391406..391855) 1 NC_011126.1 PFAM: protein of unknown function DUF474; KEGG: sul:SYO3AOP1_1279 protein of unknown function DUF474; hypothetical protein 391855 6743241 HY04AAS1_0447 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121115.1 391406 R 380749 CDS YP_002121116.1 195952826 6743242 complement(391941..392387) 1 NC_011126.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 392387 rplI 6743242 rplI Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L9 YP_002121116.1 391941 R 380749 CDS YP_002121117.1 195952827 6743243 complement(392398..392619) 1 NC_011126.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 392619 rpsR 6743243 rpsR Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S18 YP_002121117.1 392398 R 380749 CDS YP_002121118.1 195952828 6743244 complement(392645..393103) 1 NC_011126.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sul:SYO3AOP1_1690 single-strand binding protein; single-strand binding protein 393103 6743244 HY04AAS1_0450 Hydrogenobaculum sp. Y04AAS1 single-strand binding protein YP_002121118.1 392645 R 380749 CDS YP_002121119.1 195952829 6743245 complement(393116..393454) 1 NC_011126.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 393454 rpsF 6743245 rpsF Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S6 YP_002121119.1 393116 R 380749 CDS YP_002121120.1 195952830 6743246 393777..394001 1 NC_011126.1 KEGG: afu:AF0301 hypothetical protein; hypothetical protein 394001 6743246 HY04AAS1_0452 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121120.1 393777 D 380749 CDS YP_002121121.1 195952831 6743247 394008..394418 1 NC_011126.1 PFAM: PilT protein domain protein; KEGG: pab:PAB0786 hypothetical protein; PilT protein domain-containing protein 394418 6743247 HY04AAS1_0453 Hydrogenobaculum sp. Y04AAS1 PilT protein domain-containing protein YP_002121121.1 394008 D 380749 CDS YP_002121122.1 195952832 6743248 394499..395701 1 NC_011126.1 PFAM: protein of unknown function DUF214; KEGG: aae:aq_1585 ABC transporter, permease protein; hypothetical protein 395701 6743248 HY04AAS1_0454 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121122.1 394499 D 380749 CDS YP_002121123.1 195952833 6743249 395694..396326 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_417 ABC transporter; ABC transporter 396326 6743249 HY04AAS1_0455 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002121123.1 395694 D 380749 CDS YP_002121124.1 195952834 6743250 complement(396361..397749) 1 NC_011126.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sul:SYO3AOP1_0747 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 397749 6743250 HY04AAS1_0456 Hydrogenobaculum sp. Y04AAS1 aromatic hydrocarbon degradation membrane protein YP_002121124.1 396361 R 380749 CDS YP_002121125.1 195952835 6743251 397954..398334 1 NC_011126.1 SMART: Rhodanese domain protein; KEGG: sul:SYO3AOP1_1272 rhodanese domain protein; Rhodanese domain-containing protein 398334 6743251 HY04AAS1_0457 Hydrogenobaculum sp. Y04AAS1 Rhodanese domain-containing protein YP_002121125.1 397954 D 380749 CDS YP_002121126.1 195952836 6743252 complement(398379..399638) 1 NC_011126.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sul:SYO3AOP1_0932 arsenical pump membrane protein; Arsenical pump membrane protein 399638 6743252 HY04AAS1_0458 Hydrogenobaculum sp. Y04AAS1 Arsenical pump membrane protein YP_002121126.1 398379 R 380749 CDS YP_002121127.1 195952837 6743253 complement(399681..399974) 1 NC_011126.1 KEGG: tdn:Tmden_1057 hypothetical protein; hypothetical protein 399974 6743253 HY04AAS1_0459 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121127.1 399681 R 380749 CDS YP_002121128.1 195952838 6743254 complement(400021..401052) 1 NC_011126.1 KEGG: aae:aq_1134 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; glutamate 5-kinase 401052 6743254 HY04AAS1_0460 Hydrogenobaculum sp. Y04AAS1 glutamate 5-kinase YP_002121128.1 400021 R 380749 CDS YP_002121129.1 195952839 6743255 complement(401061..401264) 1 NC_011126.1 PFAM: ribosomal protein L35; KEGG: aae:aq_792a 50S ribosomal protein L35; 50S ribosomal protein L35 401264 6743255 HY04AAS1_0461 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L35 YP_002121129.1 401061 R 380749 CDS YP_002121130.1 195952840 6743256 complement(401303..401818) 1 NC_011126.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 401818 6743256 HY04AAS1_0462 Hydrogenobaculum sp. Y04AAS1 translation initiation factor IF-3 YP_002121130.1 401303 R 380749 CDS YP_002121131.1 195952841 6743257 complement(401848..404040) 1 NC_011126.1 SMART: helicase c2; DEAD-like helicases; KEGG: aae:aq_358 ATP-dependent helicase (DinG family); helicase c2 404040 6743257 HY04AAS1_0463 Hydrogenobaculum sp. Y04AAS1 helicase c2 YP_002121131.1 401848 R 380749 CDS YP_002121132.1 195952842 6743258 complement(404040..405824) 1 NC_011126.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aae:aq_1677 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 405824 6743258 HY04AAS1_0464 Hydrogenobaculum sp. Y04AAS1 aspartyl-tRNA synthetase YP_002121132.1 404040 R 380749 CDS YP_002121133.1 195952843 6743259 405891..406331 1 NC_011126.1 hypothetical protein 406331 6743259 HY04AAS1_0465 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121133.1 405891 D 380749 CDS YP_002121134.1 195952844 6743260 406582..407133 1 NC_011126.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aae:aq_045 Rieske-I iron sulfur protein; Rieske (2Fe-2S) domain-containing protein 407133 6743260 HY04AAS1_0466 Hydrogenobaculum sp. Y04AAS1 Rieske (2Fe-2S) domain-containing protein YP_002121134.1 406582 D 380749 CDS YP_002121135.1 195952845 6743261 407164..408708 1 NC_011126.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sul:SYO3AOP1_1077 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 408708 6743261 HY04AAS1_0467 Hydrogenobaculum sp. Y04AAS1 cytochrome bd ubiquinol oxidase subunit I YP_002121135.1 407164 D 380749 CDS YP_002121136.1 195952846 6743262 408722..409762 1 NC_011126.1 KEGG: sul:SYO3AOP1_1076 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 409762 6743262 HY04AAS1_0468 Hydrogenobaculum sp. Y04AAS1 cytochrome d ubiquinol oxidase, subunit II YP_002121136.1 408722 D 380749 CDS YP_002121137.1 195952847 6743263 complement(409925..410908) 1 NC_011126.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: aae:aq_2069 GTP-binding protein; GTP-binding protein Obg/CgtA 410908 6743263 HY04AAS1_0469 Hydrogenobaculum sp. Y04AAS1 GTP-binding protein Obg/CgtA YP_002121137.1 409925 R 380749 CDS YP_002121138.1 195952848 6743264 complement(410916..411920) 1 NC_011126.1 KEGG: aae:aq_1065 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 411920 6743264 HY04AAS1_0470 Hydrogenobaculum sp. Y04AAS1 glyceraldehyde-3-phosphate dehydrogenase, type I YP_002121138.1 410916 R 380749 CDS YP_002121139.1 195952849 6743265 complement(411955..412635) 1 NC_011126.1 KEGG: pmo:Pmob_1140 protein of unknown function DUF554; hypothetical protein 412635 6743265 HY04AAS1_0471 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121139.1 411955 R 380749 CDS YP_002121140.1 195952850 6743266 complement(412635..412973) 1 NC_011126.1 PFAM: histidine triad (HIT) protein; KEGG: aae:aq_141 protein kinase C inhibitor (HIT family); histidine triad (HIT) protein 412973 6743266 HY04AAS1_0472 Hydrogenobaculum sp. Y04AAS1 histidine triad (HIT) protein YP_002121140.1 412635 R 380749 CDS YP_002121141.1 195952851 6743269 416267..416563 1 NC_011126.1 hypothetical protein 416563 6743269 HY04AAS1_0475 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121141.1 416267 D 380749 CDS YP_002121142.1 195952852 6743270 complement(416542..417432) 1 NC_011126.1 PFAM: protein of unknown function DUF752; KEGG: aae:aq_1980 hypothetical protein; hypothetical protein 417432 6743270 HY04AAS1_0476 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121142.1 416542 R 380749 CDS YP_002121143.1 195952853 6743271 complement(417383..418303) 1 NC_011126.1 TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; KEGG: aae:aq_2119 thiamine monophosphate kinase; thiamine-monophosphate kinase 418303 6743271 HY04AAS1_0477 Hydrogenobaculum sp. Y04AAS1 thiamine-monophosphate kinase YP_002121143.1 417383 R 380749 CDS YP_002121144.1 195952854 6743272 complement(418300..418689) 1 NC_011126.1 KEGG: gur:Gura_3306 hypothetical protein; hypothetical protein 418689 6743272 HY04AAS1_0478 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121144.1 418300 R 380749 CDS YP_002121145.1 195952855 6743273 complement(418683..419321) 1 NC_011126.1 PFAM: beta-lactamase domain protein; KEGG: aae:aq_2135 hypothetical protein; beta-lactamase domain-containing protein 419321 6743273 HY04AAS1_0479 Hydrogenobaculum sp. Y04AAS1 beta-lactamase domain-containing protein YP_002121145.1 418683 R 380749 CDS YP_002121146.1 195952856 6743274 complement(419278..419517) 1 NC_011126.1 hypothetical protein 419517 6743274 HY04AAS1_0480 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121146.1 419278 R 380749 CDS YP_002121147.1 195952857 6743275 complement(419548..420447) 1 NC_011126.1 PFAM: protein of unknown function DUF58; KEGG: aae:aq_1508 hypothetical protein; hypothetical protein 420447 6743275 HY04AAS1_0481 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121147.1 419548 R 380749 CDS YP_002121148.1 195952858 6743276 complement(420444..421397) 1 NC_011126.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aae:aq_1509 oligopeptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 421397 6743276 HY04AAS1_0482 Hydrogenobaculum sp. Y04AAS1 binding-protein-dependent transport systems inner membrane component YP_002121148.1 420444 R 380749 CDS YP_002121149.1 195952859 6743277 complement(421384..422064) 1 NC_011126.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mja:MJ1656 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HpcE); 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 422064 6743277 HY04AAS1_0483 Hydrogenobaculum sp. Y04AAS1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase YP_002121149.1 421384 R 380749 CDS YP_002121150.1 195952860 6743278 complement(422088..425534) 1 NC_011126.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: aae:aq_629 chromosome assembly protein homolog; chromosome segregation protein SMC 425534 6743278 HY04AAS1_0484 Hydrogenobaculum sp. Y04AAS1 chromosome segregation protein SMC YP_002121150.1 422088 R 380749 CDS YP_002121151.1 195952861 6743279 complement(425536..426744) 1 NC_011126.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 426744 6743279 HY04AAS1_0485 Hydrogenobaculum sp. Y04AAS1 argininosuccinate synthase YP_002121151.1 425536 R 380749 CDS YP_002121152.1 195952862 6743281 428522..429685 1 NC_011126.1 catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase 429685 6743281 HY04AAS1_0487 Hydrogenobaculum sp. Y04AAS1 LL-diaminopimelate aminotransferase YP_002121152.1 428522 D 380749 CDS YP_002121153.1 195952863 6743282 429682..429867 1 NC_011126.1 PFAM: protein of unknown function DUF343; Transcription factor AL2, zinc ribbon domain protein; KEGG: sfu:Sfum_3635 protein of unknown function DUF343; hypothetical protein 429867 6743282 HY04AAS1_0488 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121153.1 429682 D 380749 CDS YP_002121154.1 195952864 6743283 429845..431122 1 NC_011126.1 PFAM: FAD linked oxidase domain protein; KEGG: cte:CT0170 hypothetical protein; FAD linked oxidase domain-containing protein 431122 6743283 HY04AAS1_0489 Hydrogenobaculum sp. Y04AAS1 FAD linked oxidase domain-containing protein YP_002121154.1 429845 D 380749 CDS YP_002121155.1 195952865 6743284 431135..432424 1 NC_011126.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: aae:aq_1919 GTP binding protein Era; small GTP-binding protein 432424 6743284 HY04AAS1_0490 Hydrogenobaculum sp. Y04AAS1 small GTP-binding protein YP_002121155.1 431135 D 380749 CDS YP_002121156.1 195952866 6743285 432428..433558 1 NC_011126.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 433558 argJ 6743285 argJ Hydrogenobaculum sp. Y04AAS1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_002121156.1 432428 D 380749 CDS YP_002121157.1 195952867 6743286 complement(433555..434049) 1 NC_011126.1 KEGG: pca:Pcar_2534 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 434049 6743286 HY04AAS1_0492 Hydrogenobaculum sp. Y04AAS1 peptide deformylase YP_002121157.1 433555 R 380749 CDS YP_002121158.1 195952868 6743287 complement(434046..434543) 1 NC_011126.1 PFAM: amino acid-binding ACT domain protein; KEGG: sul:SYO3AOP1_0896 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 434543 6743287 HY04AAS1_0493 Hydrogenobaculum sp. Y04AAS1 amino acid-binding ACT domain-containing protein YP_002121158.1 434046 R 380749 CDS YP_002121159.1 195952869 6743289 434748..436142 1 NC_011126.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: lpc:LPC_3244 fumarate hydratase; fumarate hydratase, class II 436142 6743289 HY04AAS1_0494 Hydrogenobaculum sp. Y04AAS1 fumarate hydratase, class II YP_002121159.1 434748 D 380749 CDS YP_002121160.1 195952870 6743290 436132..437466 1 NC_011126.1 PFAM: aminotransferase class-III; KEGG: aae:aq_170 DapA aminotransferase; class III aminotransferase 437466 6743290 HY04AAS1_0495 Hydrogenobaculum sp. Y04AAS1 class III aminotransferase YP_002121160.1 436132 D 380749 CDS YP_002121161.1 195952871 6743291 437463..437861 1 NC_011126.1 PFAM: protein of unknown function DUF55; KEGG: sul:SYO3AOP1_0170 protein of unknown function DUF55; hypothetical protein 437861 6743291 HY04AAS1_0496 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121161.1 437463 D 380749 CDS YP_002121162.1 195952872 6743292 437858..438424 1 NC_011126.1 KEGG: mja:MJ1644 hypothetical protein; hypothetical protein 438424 6743292 HY04AAS1_0497 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121162.1 437858 D 380749 CDS YP_002121163.1 195952873 6743293 complement(438412..438762) 1 NC_011126.1 KEGG: csc:Csac_1648 hypothetical protein; hypothetical protein 438762 6743293 HY04AAS1_0498 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121163.1 438412 R 380749 CDS YP_002121164.1 195952874 6743294 complement(438746..439999) 1 NC_011126.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 439999 glyA 6743294 glyA Hydrogenobaculum sp. Y04AAS1 serine hydroxymethyltransferase YP_002121164.1 438746 R 380749 CDS YP_002121165.1 195952875 6743295 complement(440011..441333) 1 NC_011126.1 KEGG: nis:NIS_0741 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 441333 6743295 HY04AAS1_0500 Hydrogenobaculum sp. Y04AAS1 nucleotide sugar dehydrogenase YP_002121165.1 440011 R 380749 CDS YP_002121166.1 195952876 6743296 complement(441349..442098) 1 NC_011126.1 PFAM: protein of unknown function DUF28; KEGG: aae:aq_1575 hypothetical protein; hypothetical protein 442098 6743296 HY04AAS1_0501 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121166.1 441349 R 380749 CDS YP_002121167.1 195952877 6743297 complement(442110..442694) 1 NC_011126.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: aae:aq_2049 hypothetical protein; DeoR family transcriptional regulator 442694 6743297 HY04AAS1_0502 Hydrogenobaculum sp. Y04AAS1 DeoR family transcriptional regulator YP_002121167.1 442110 R 380749 CDS YP_002121168.1 195952878 6743298 complement(442741..443331) 1 NC_011126.1 PFAM: ExsB family protein; KEGG: dsy:DSY0668 hypothetical protein; ExsB family protein 443331 6743298 HY04AAS1_0503 Hydrogenobaculum sp. Y04AAS1 ExsB family protein YP_002121168.1 442741 R 380749 CDS YP_002121169.1 195952879 6743300 443462..443896 1 NC_011126.1 KEGG: aae:aq_252 protein; hypothetical protein 443896 6743300 HY04AAS1_0504 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121169.1 443462 D 380749 CDS YP_002121170.1 195952880 6743301 443893..444966 1 NC_011126.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: aae:aq_138 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; riboflavin biosynthesis protein RibD 444966 6743301 HY04AAS1_0505 Hydrogenobaculum sp. Y04AAS1 riboflavin biosynthesis protein RibD YP_002121170.1 443893 D 380749 CDS YP_002121171.1 195952881 6743302 444947..445978 1 NC_011126.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 445978 queA 6743302 queA Hydrogenobaculum sp. Y04AAS1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002121171.1 444947 D 380749 CDS YP_002121172.1 195952882 6743303 complement(446032..446658) 1 NC_011126.1 KEGG: rno:684795 hypothetical protein; hypothetical protein 446658 6743303 HY04AAS1_0507 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121172.1 446032 R 380749 CDS YP_002121173.1 195952883 6743304 complement(446724..447593) 1 NC_011126.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: sul:SYO3AOP1_0919 thymidylate synthase complementing protein ThyX; thymidylate synthase complementing protein ThyX 447593 6743304 HY04AAS1_0508 Hydrogenobaculum sp. Y04AAS1 thymidylate synthase complementing protein ThyX YP_002121173.1 446724 R 380749 CDS YP_002121174.1 195952884 6743305 447664..448401 1 NC_011126.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sul:SYO3AOP1_1671 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 448401 6743305 HY04AAS1_0509 Hydrogenobaculum sp. Y04AAS1 3-oxoacyl-(acyl-carrier-protein) reductase YP_002121174.1 447664 D 380749 CDS YP_002121175.1 195952885 6743306 448432..448665 1 NC_011126.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 448665 acpP 6743306 acpP Hydrogenobaculum sp. Y04AAS1 acyl carrier protein YP_002121175.1 448432 D 380749 CDS YP_002121176.1 195952886 6743307 448662..449903 1 NC_011126.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: aae:aq_1717 3-oxoacyl-[acyl-carrier-protein] synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 449903 6743307 HY04AAS1_0511 Hydrogenobaculum sp. Y04AAS1 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002121176.1 448662 D 380749 CDS YP_002121177.1 195952887 6743308 449916..450614 1 NC_011126.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: aae:aq_946 RNase III; Ribonuclease III 450614 6743308 HY04AAS1_0512 Hydrogenobaculum sp. Y04AAS1 Ribonuclease III YP_002121177.1 449916 D 380749 CDS YP_002121178.1 195952888 6743309 450595..451365 1 NC_011126.1 KEGG: mae:Maeo_0859 N-glycosylase/DNA lyase; hypothetical protein 451365 6743309 HY04AAS1_0513 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121178.1 450595 D 380749 CDS YP_002121179.1 195952889 6743310 451419..451691 1 NC_011126.1 KEGG: sul:SYO3AOP1_1345 conserved hypothetical lipoprotein; hypothetical protein 451691 6743310 HY04AAS1_0514 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121179.1 451419 D 380749 CDS YP_002121180.1 195952890 6743311 451692..452798 1 NC_011126.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 452798 6743311 HY04AAS1_0515 Hydrogenobaculum sp. Y04AAS1 GTP-dependent nucleic acid-binding protein EngD YP_002121180.1 451692 D 380749 CDS YP_002121181.1 195952891 6743312 452811..454724 1 NC_011126.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 454724 thrS 6743312 thrS Hydrogenobaculum sp. Y04AAS1 threonyl-tRNA synthetase YP_002121181.1 452811 D 380749 CDS YP_002121182.1 195952892 6743313 454721..455386 1 NC_011126.1 TIGRFAM: dethiobiotin synthase; KEGG: sul:SYO3AOP1_1157 dethiobiotin synthase; dethiobiotin synthase 455386 6743313 HY04AAS1_0517 Hydrogenobaculum sp. Y04AAS1 dethiobiotin synthase YP_002121182.1 454721 D 380749 CDS YP_002121183.1 195952893 6743314 455434..457344 1 NC_011126.1 KEGG: aae:aq_936 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 457344 6743314 HY04AAS1_0518 Hydrogenobaculum sp. Y04AAS1 ATP-dependent metalloprotease FtsH YP_002121183.1 455434 D 380749 CDS YP_002121184.1 195952894 6743315 457413..458687 1 NC_011126.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 458687 6743315 HY04AAS1_0519 Hydrogenobaculum sp. Y04AAS1 3-isopropylmalate dehydratase large subunit YP_002121184.1 457413 D 380749 CDS YP_002121185.1 195952895 6743316 458699..458920 1 NC_011126.1 KEGG: aeh:Mlg_2741 hypothetical protein; hypothetical protein 458920 6743316 HY04AAS1_0520 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121185.1 458699 D 380749 CDS YP_002121186.1 195952896 6743317 458914..459288 1 NC_011126.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: aae:aq_813 holo-[acyl-carrier protein] synthase; holo-acyl-carrier-protein synthase 459288 6743317 HY04AAS1_0521 Hydrogenobaculum sp. Y04AAS1 holo-acyl-carrier-protein synthase YP_002121186.1 458914 D 380749 CDS YP_002121187.1 195952897 6743318 459282..460544 1 NC_011126.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aae:aq_1208 diaminopimelate decarboxylase; diaminopimelate decarboxylase 460544 6743318 HY04AAS1_0522 Hydrogenobaculum sp. Y04AAS1 diaminopimelate decarboxylase YP_002121187.1 459282 D 380749 CDS YP_002121188.1 195952898 6743319 460572..461060 1 NC_011126.1 PFAM: 4-vinyl reductase 4VR; KEGG: aae:aq_1655 hypothetical protein; 4-vinyl reductase 4VR 461060 6743319 HY04AAS1_0523 Hydrogenobaculum sp. Y04AAS1 4-vinyl reductase 4VR YP_002121188.1 460572 D 380749 CDS YP_002121189.1 195952899 6743320 461062..462327 1 NC_011126.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 462327 6743320 HY04AAS1_0524 Hydrogenobaculum sp. Y04AAS1 S-adenosyl-L-homocysteine hydrolase YP_002121189.1 461062 D 380749 CDS YP_002121190.1 195952900 6743321 462382..463752 1 NC_011126.1 PFAM: FAD linked oxidase domain protein; KEGG: aae:aq_1769 D-lactate dehydrogenase; FAD linked oxidase domain-containing protein 463752 6743321 HY04AAS1_0525 Hydrogenobaculum sp. Y04AAS1 FAD linked oxidase domain-containing protein YP_002121190.1 462382 D 380749 CDS YP_002121191.1 195952901 6743322 complement(463745..464272) 1 NC_011126.1 KEGG: mag:amb1922 hypothetical protein; hypothetical protein 464272 6743322 HY04AAS1_0526 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121191.1 463745 R 380749 CDS YP_002121192.1 195952902 6743323 complement(464315..465523) 1 NC_011126.1 PFAM: type II secretion system protein; KEGG: aae:aq_747 fimbrial assembly protein PilC; type II secretion system protein 465523 6743323 HY04AAS1_0527 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein YP_002121192.1 464315 R 380749 CDS YP_002121193.1 195952903 6743324 complement(465523..466341) 1 NC_011126.1 KEGG: sah:SaurJH1_1113 bacteriocin-associated integral membrane protein; hypothetical protein 466341 6743324 HY04AAS1_0528 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121193.1 465523 R 380749 CDS YP_002121194.1 195952904 6743325 complement(466338..468299) 1 NC_011126.1 PFAM: type II and III secretion system protein; KEGG: aae:aq_585 type IV pilus assembly protein PilQ; type II and III secretion system protein 468299 6743325 HY04AAS1_0529 Hydrogenobaculum sp. Y04AAS1 type II and III secretion system protein YP_002121194.1 466338 R 380749 CDS YP_002121195.1 195952905 6743326 complement(468289..468600) 1 NC_011126.1 hypothetical protein 468600 6743326 HY04AAS1_0530 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121195.1 468289 R 380749 CDS YP_002121196.1 195952906 6743327 complement(468584..469345) 1 NC_011126.1 KEGG: pfa:PFB0375w hypothetical protein; hypothetical protein 469345 6743327 HY04AAS1_0531 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121196.1 468584 R 380749 CDS YP_002121197.1 195952907 6743328 complement(469335..470138) 1 NC_011126.1 hypothetical protein 470138 6743328 HY04AAS1_0532 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121197.1 469335 R 380749 CDS YP_002121198.1 195952908 6743329 complement(470225..470383) 1 NC_011126.1 KEGG: tde:TDE2498 metallo-beta-lactamase family protein; metallo-beta-lactamase family protein 470383 6743329 HY04AAS1_0533 Hydrogenobaculum sp. Y04AAS1 metallo-beta-lactamase family protein YP_002121198.1 470225 R 380749 CDS YP_002121199.1 195952909 6743330 complement(470411..470647) 1 NC_011126.1 hypothetical protein 470647 6743330 HY04AAS1_0534 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121199.1 470411 R 380749 CDS YP_002121200.1 195952910 6743331 complement(470657..471199) 1 NC_011126.1 KEGG: abu:Abu_1707 site-specific recombinase, phage integrase family; hypothetical protein 471199 6743331 HY04AAS1_0535 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121200.1 470657 R 380749 CDS YP_002121201.1 195952911 6743332 complement(471201..471293) 1 NC_011126.1 hypothetical protein 471293 6743332 HY04AAS1_0536 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121201.1 471201 R 380749 CDS YP_002121202.1 195952912 6743333 complement(471277..472065) 1 NC_011126.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpe:Tpen_1455 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 472065 6743333 HY04AAS1_0537 Hydrogenobaculum sp. Y04AAS1 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_002121202.1 471277 R 380749 CDS YP_002121203.1 195952913 6743334 472112..473230 1 NC_011126.1 PFAM: aminotransferase class I and II; KEGG: aae:aq_626 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 473230 6743334 HY04AAS1_0538 Hydrogenobaculum sp. Y04AAS1 8-amino-7-oxononanoate synthase YP_002121203.1 472112 D 380749 CDS YP_002121204.1 195952914 6743335 473319..473606 1 NC_011126.1 hypothetical protein 473606 6743335 HY04AAS1_0539 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121204.1 473319 D 380749 CDS YP_002121205.1 195952915 6743336 473772..475037 1 NC_011126.1 KEGG: mbn:Mboo_1434 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 475037 6743336 HY04AAS1_0540 Hydrogenobaculum sp. Y04AAS1 natural resistance-associated macrophage protein YP_002121205.1 473772 D 380749 CDS YP_002121206.1 195952916 6743337 complement(475150..476085) 1 NC_011126.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aae:aq_481 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 476085 6743337 HY04AAS1_0541 Hydrogenobaculum sp. Y04AAS1 binding-protein-dependent transport systems inner membrane component YP_002121206.1 475150 R 380749 CDS YP_002121207.1 195952917 6743338 complement(476085..477842) 1 NC_011126.1 PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; KEGG: aae:aq_1967 DNA polymerase I (PolI); DNA-directed DNA polymerase 477842 6743338 HY04AAS1_0542 Hydrogenobaculum sp. Y04AAS1 DNA-directed DNA polymerase YP_002121207.1 476085 R 380749 CDS YP_002121208.1 195952918 6743339 complement(477839..479209) 1 NC_011126.1 PFAM: amino acid permease-associated region; KEGG: sul:SYO3AOP1_1274 amino acid permease-associated region; amino acid permease-associated protein 479209 6743339 HY04AAS1_0543 Hydrogenobaculum sp. Y04AAS1 amino acid permease-associated protein YP_002121208.1 477839 R 380749 CDS YP_002121209.1 195952919 6743340 479276..480709 1 NC_011126.1 PFAM: acyl-CoA reductase; Aldehyde Dehydrogenase_; KEGG: aae:aq_186 aldehyde dehydrogenase; adehyde dehydrogenase 480709 6743340 HY04AAS1_0544 Hydrogenobaculum sp. Y04AAS1 adehyde dehydrogenase YP_002121209.1 479276 D 380749 CDS YP_002121210.1 195952920 6743341 complement(480701..481669) 1 NC_011126.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 481669 6743341 HY04AAS1_0545 Hydrogenobaculum sp. Y04AAS1 delta-aminolevulinic acid dehydratase YP_002121210.1 480701 R 380749 CDS YP_002121211.1 195952921 6743342 481740..482471 1 NC_011126.1 KEGG: tte:TTE1701 hydrogenase 4 subunit D; hypothetical protein 482471 6743342 HY04AAS1_0546 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121211.1 481740 D 380749 CDS YP_002121212.1 195952922 6743343 482465..485350 1 NC_011126.1 KEGG: aae:aq_863 hypothetical protein; hypothetical protein 485350 6743343 HY04AAS1_0547 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121212.1 482465 D 380749 CDS YP_002121213.1 195952923 6743344 complement(485352..485837) 1 NC_011126.1 KEGG: aae:aq_162 folate biosynthesis 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 485837 6743344 HY04AAS1_0548 Hydrogenobaculum sp. Y04AAS1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002121213.1 485352 R 380749 CDS YP_002121214.1 195952924 6743345 complement(485834..487111) 1 NC_011126.1 PFAM: amidohydrolase; KEGG: aae:aq_587 N-ethylammeline chlorohydrolase; amidohydrolase 487111 6743345 HY04AAS1_0549 Hydrogenobaculum sp. Y04AAS1 amidohydrolase YP_002121214.1 485834 R 380749 CDS YP_002121215.1 195952925 6743346 complement(487114..487569) 1 NC_011126.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 487569 ribH 6743346 ribH Hydrogenobaculum sp. Y04AAS1 6,7-dimethyl-8-ribityllumazine synthase YP_002121215.1 487114 R 380749 CDS YP_002121216.1 195952926 6743347 complement(487593..487994) 1 NC_011126.1 KEGG: aae:aq_1466 protein; hypothetical protein 487994 6743347 HY04AAS1_0551 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121216.1 487593 R 380749 CDS YP_002121217.1 195952927 6743348 complement(487996..488931) 1 NC_011126.1 KEGG: aae:aq_910 DNA replication protein DnaC; DNA replication protein DnaC 488931 6743348 HY04AAS1_0552 Hydrogenobaculum sp. Y04AAS1 DNA replication protein DnaC YP_002121217.1 487996 R 380749 CDS YP_002121218.1 195952928 6743349 complement(488964..490448) 1 NC_011126.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 490448 6743349 HY04AAS1_0553 Hydrogenobaculum sp. Y04AAS1 EmrB/QacA subfamily drug resistance transporter YP_002121218.1 488964 R 380749 CDS YP_002121219.1 195952929 6743350 complement(490445..492031) 1 NC_011126.1 PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: aae:aq_1172 carbamoyl-phosphate synthase large chain; Carbamoyl-phosphate synthase L chain ATP-binding 492031 6743350 HY04AAS1_0554 Hydrogenobaculum sp. Y04AAS1 Carbamoyl-phosphate synthase L chain ATP-binding YP_002121219.1 490445 R 380749 CDS YP_002121220.1 195952930 6743351 492076..493566 1 NC_011126.1 PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: aae:aq_582 anthranilate synthase component I; Anthranilate synthase 493566 6743351 HY04AAS1_0555 Hydrogenobaculum sp. Y04AAS1 Anthranilate synthase YP_002121220.1 492076 D 380749 CDS YP_002121221.1 195952931 6743352 493556..494155 1 NC_011126.1 KEGG: aae:aq_578 serine/threonine protein kinase; serine/threonine protein kinase 494155 6743352 HY04AAS1_0556 Hydrogenobaculum sp. Y04AAS1 serine/threonine protein kinase YP_002121221.1 493556 D 380749 CDS YP_002121222.1 195952932 6743353 complement(494160..494651) 1 NC_011126.1 PFAM: Sterol-binding domain protein; KEGG: aae:aq_026 hypothetical protein; Sterol-binding domain-containing protein 494651 6743353 HY04AAS1_0557 Hydrogenobaculum sp. Y04AAS1 Sterol-binding domain-containing protein YP_002121222.1 494160 R 380749 CDS YP_002121223.1 195952933 6743354 494805..495017 1 NC_011126.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: aae:aq_932a phosphoribosylformylglycinamidine (FGAM) synthase, PurS component; phosphoribosylformylglycinamidine synthase PurS 495017 6743354 HY04AAS1_0558 Hydrogenobaculum sp. Y04AAS1 phosphoribosylformylglycinamidine synthase PurS YP_002121223.1 494805 D 380749 CDS YP_002121224.1 195952934 6743355 495014..495673 1 NC_011126.1 KEGG: aae:aq_1105 phosphoribosyl formylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; phosphoribosylformylglycinamidine synthase I 495673 6743355 HY04AAS1_0559 Hydrogenobaculum sp. Y04AAS1 phosphoribosylformylglycinamidine synthase I YP_002121224.1 495014 D 380749 CDS YP_002121225.1 195952935 6743356 495689..498112 1 NC_011126.1 KEGG: aae:aq_242 Lon protease; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 498112 6743356 HY04AAS1_0560 Hydrogenobaculum sp. Y04AAS1 ATP-dependent protease La YP_002121225.1 495689 D 380749 CDS YP_002121226.1 195952936 6743357 498109..498642 1 NC_011126.1 TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: aae:aq_1607 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 498642 6743357 HY04AAS1_0561 Hydrogenobaculum sp. Y04AAS1 deoxycytidine triphosphate deaminase YP_002121226.1 498109 D 380749 CDS YP_002121227.1 195952937 6743358 complement(498620..499162) 1 NC_011126.1 PFAM: Lytic transglycosylase catalytic; KEGG: sul:SYO3AOP1_0253 lytic transglycosylase catalytic; Lytic transglycosylase 499162 6743358 HY04AAS1_0562 Hydrogenobaculum sp. Y04AAS1 Lytic transglycosylase YP_002121227.1 498620 R 380749 CDS YP_002121228.1 195952938 6743359 complement(499171..501711) 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator; diguanylate cyclase/phosphodiesterase 501711 6743359 HY04AAS1_0563 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase/phosphodiesterase YP_002121228.1 499171 R 380749 CDS YP_002121229.1 195952939 6743360 complement(501808..503028) 1 NC_011126.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 503028 hisS 6743360 hisS Hydrogenobaculum sp. Y04AAS1 histidyl-tRNA synthetase YP_002121229.1 501808 R 380749 CDS YP_002121230.1 195952940 6743361 complement(503030..504376) 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_835 NADH oxidase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 504376 6743361 HY04AAS1_0565 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121230.1 503030 R 380749 CDS YP_002121231.1 195952941 6743362 complement(504373..505809) 1 NC_011126.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 505809 6743362 HY04AAS1_0566 Hydrogenobaculum sp. Y04AAS1 leucyl aminopeptidase YP_002121231.1 504373 R 380749 CDS YP_002121232.1 195952942 6743363 complement(505922..507133) 1 NC_011126.1 PFAM: aminotransferase class I and II; KEGG: aae:aq_2094 aminotransferase; class I and II aminotransferase 507133 6743363 HY04AAS1_0567 Hydrogenobaculum sp. Y04AAS1 class I and II aminotransferase YP_002121232.1 505922 R 380749 CDS YP_002121233.1 195952943 6743364 complement(507126..507482) 1 NC_011126.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: aae:aq_2095 DnaK suppressor protein; TraR/DksA family transcriptional regulator 507482 6743364 HY04AAS1_0568 Hydrogenobaculum sp. Y04AAS1 TraR/DksA family transcriptional regulator YP_002121233.1 507126 R 380749 CDS YP_002121234.1 195952944 6743365 complement(507519..508970) 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: sul:SYO3AOP1_0921 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 508970 6743365 HY04AAS1_0569 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002121234.1 507519 R 380749 CDS YP_002121235.1 195952945 6743366 complement(508995..509648) 1 NC_011126.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: aae:aq_540 multiple antibiotic resistance protein; multiple antibiotic resistance (MarC)-like protein 509648 6743366 HY04AAS1_0570 Hydrogenobaculum sp. Y04AAS1 multiple antibiotic resistance (MarC)-like protein YP_002121235.1 508995 R 380749 CDS YP_002121236.1 195952946 6743367 complement(509621..510193) 1 NC_011126.1 hypothetical protein 510193 6743367 HY04AAS1_0571 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121236.1 509621 R 380749 CDS YP_002121237.1 195952947 6743368 complement(510183..513284) 1 NC_011126.1 PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_1132 acriflavin resistance protein; acriflavin resistance protein 513284 6743368 HY04AAS1_0572 Hydrogenobaculum sp. Y04AAS1 acriflavin resistance protein YP_002121237.1 510183 R 380749 CDS YP_002121238.1 195952948 6743369 complement(513281..514450) 1 NC_011126.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1133 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 514450 6743369 HY04AAS1_0573 Hydrogenobaculum sp. Y04AAS1 RND family efflux transporter MFP subunit YP_002121238.1 513281 R 380749 CDS YP_002121239.1 195952949 6743370 complement(514447..515730) 1 NC_011126.1 PFAM: outer membrane efflux protein; KEGG: gme:Gmet_3465 outer membrane efflux protein; outer membrane efflux protein 515730 6743370 HY04AAS1_0574 Hydrogenobaculum sp. Y04AAS1 outer membrane efflux protein YP_002121239.1 514447 R 380749 CDS YP_002121240.1 195952950 6743371 complement(515714..516115) 1 NC_011126.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sul:SYO3AOP1_0933 protein tyrosine phosphatase; protein tyrosine phosphatase 516115 6743371 HY04AAS1_0575 Hydrogenobaculum sp. Y04AAS1 protein tyrosine phosphatase YP_002121240.1 515714 R 380749 CDS YP_002121241.1 195952951 6743372 complement(516112..516438) 1 NC_011126.1 PFAM: regulatory protein ArsR; KEGG: aae:aq_1387 transcriptional regulator (ArsR family); ArsR family transcriptional regulator 516438 6743372 HY04AAS1_0576 Hydrogenobaculum sp. Y04AAS1 ArsR family transcriptional regulator YP_002121241.1 516112 R 380749 CDS YP_002121242.1 195952952 6743373 complement(516435..516713) 1 NC_011126.1 KEGG: tdn:Tmden_1057 hypothetical protein; hypothetical protein 516713 6743373 HY04AAS1_0577 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121242.1 516435 R 380749 CDS YP_002121243.1 195952953 6743374 516905..517060 1 NC_011126.1 hypothetical protein 517060 6743374 HY04AAS1_0578 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121243.1 516905 D 380749 CDS YP_002121244.1 195952954 6743375 517063..517794 1 NC_011126.1 KEGG: pho:PH1420 hypothetical protein; hypothetical protein 517794 6743375 HY04AAS1_0579 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121244.1 517063 D 380749 CDS YP_002121245.1 195952955 6743376 517921..519132 1 NC_011126.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; KEGG: aae:aq_1737 cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane-fatty-acyl-phospholipid synthase 519132 6743376 HY04AAS1_0580 Hydrogenobaculum sp. Y04AAS1 Cyclopropane-fatty-acyl-phospholipid synthase YP_002121245.1 517921 D 380749 CDS YP_002121246.1 195952956 6743377 519157..519528 1 NC_011126.1 KEGG: sul:SYO3AOP1_1141 hypothetical protein; hypothetical protein 519528 6743377 HY04AAS1_0581 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121246.1 519157 D 380749 CDS YP_002121247.1 195952957 6743378 complement(519525..520958) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0383 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 520958 6743378 HY04AAS1_0582 Hydrogenobaculum sp. Y04AAS1 pyruvate kinase YP_002121247.1 519525 R 380749 CDS YP_002121248.1 195952958 6743379 complement(520981..522369) 1 NC_011126.1 PFAM: Chloride channel core; KEGG: cma:Cmaq_0176 chloride channel core; chloride channel core protein 522369 6743379 HY04AAS1_0583 Hydrogenobaculum sp. Y04AAS1 chloride channel core protein YP_002121248.1 520981 R 380749 CDS YP_002121249.1 195952959 6743380 complement(522362..522661) 1 NC_011126.1 PFAM: protein of unknown function DUF190; KEGG: mae:Maeo_0017 protein of unknown function DUF190; hypothetical protein 522661 6743380 HY04AAS1_0584 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121249.1 522362 R 380749 CDS YP_002121250.1 195952960 6743381 complement(522658..522969) 1 NC_011126.1 PFAM: protein of unknown function DUF190; KEGG: mac:MA3935 hypothetical protein; hypothetical protein 522969 6743381 HY04AAS1_0585 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121250.1 522658 R 380749 CDS YP_002121251.1 195952961 6743382 complement(522966..523334) 1 NC_011126.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: aae:aq_449 integral membrane protein possibly involved in chromosome condensation; CrcB protein 523334 6743382 HY04AAS1_0586 Hydrogenobaculum sp. Y04AAS1 CrcB protein YP_002121251.1 522966 R 380749 CDS YP_002121252.1 195952962 6743383 523551..524900 1 NC_011126.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_1360 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate/alanine ligase 524900 6743383 HY04AAS1_0587 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylmuramate/alanine ligase YP_002121252.1 523551 D 380749 CDS YP_002121253.1 195952963 6743384 524887..525654 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: sul:SYO3AOP1_0681 glycosyl transferase family 2; family 2 glycosyl transferase 525654 6743384 HY04AAS1_0588 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002121253.1 524887 D 380749 CDS YP_002121254.1 195952964 6743385 complement(525657..526700) 1 NC_011126.1 PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: aae:aq_1735 chaperone DnaJ; heat shock protein DnaJ domain-containing protein 526700 6743385 HY04AAS1_0589 Hydrogenobaculum sp. Y04AAS1 heat shock protein DnaJ domain-containing protein YP_002121254.1 525657 R 380749 CDS YP_002121255.1 195952965 6743386 complement(526687..527049) 1 NC_011126.1 KEGG: csc:Csac_0596 hypothetical protein; hypothetical protein 527049 6743386 HY04AAS1_0590 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121255.1 526687 R 380749 CDS YP_002121256.1 195952966 6743387 complement(527062..528090) 1 NC_011126.1 PFAM: flagellar P-ring protein; KEGG: aae:aq_1713 flagellar P-ring protein FlgI; flagellar P-ring protein 528090 6743387 HY04AAS1_0591 Hydrogenobaculum sp. Y04AAS1 flagellar P-ring protein YP_002121256.1 527062 R 380749 CDS YP_002121257.1 195952967 6743388 complement(528148..529263) 1 NC_011126.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_1958 hypothetical protein; Radical SAM domain-containing protein 529263 6743388 HY04AAS1_0592 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121257.1 528148 R 380749 CDS YP_002121258.1 195952968 6743389 complement(529354..530889) 1 NC_011126.1 KEGG: aae:aq_777 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase 530889 6743389 HY04AAS1_0593 Hydrogenobaculum sp. Y04AAS1 L-aspartate oxidase YP_002121258.1 529354 R 380749 CDS YP_002121259.1 195952969 6743390 complement(530876..531850) 1 NC_011126.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: aae:aq_778 hypothetical protein; hypothetical protein 531850 6743390 HY04AAS1_0594 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121259.1 530876 R 380749 CDS YP_002121260.1 195952970 6743391 complement(531853..532839) 1 NC_011126.1 KEGG: aae:aq_2114 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 532839 6743391 HY04AAS1_0595 Hydrogenobaculum sp. Y04AAS1 translation initiation factor, aIF-2BI family YP_002121260.1 531853 R 380749 CDS YP_002121261.1 195952971 6743392 complement(532833..533714) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1064 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; homoserine kinase 533714 6743392 HY04AAS1_0596 Hydrogenobaculum sp. Y04AAS1 homoserine kinase YP_002121261.1 532833 R 380749 CDS YP_002121262.1 195952972 6743393 533886..534281 1 NC_011126.1 KEGG: afu:AF0555 hypothetical protein; hypothetical protein 534281 6743393 HY04AAS1_0597 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121262.1 533886 D 380749 CDS YP_002121263.1 195952973 6743394 534292..534519 1 NC_011126.1 PFAM: SirA family protein; KEGG: afu:AF0556 hypothetical protein; SirA family protein 534519 6743394 HY04AAS1_0598 Hydrogenobaculum sp. Y04AAS1 SirA family protein YP_002121263.1 534292 D 380749 CDS YP_002121264.1 195952974 6743395 534541..535686 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb1817 uncharacterized NAD(FAD)-dependent dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 535686 6743395 HY04AAS1_0599 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121264.1 534541 D 380749 CDS YP_002121265.1 195952975 6743396 535698..536558 1 NC_011126.1 KEGG: sai:Saci_0333 hypothetical protein; hypothetical protein 536558 6743396 HY04AAS1_0600 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121265.1 535698 D 380749 CDS YP_002121266.1 195952976 6743397 complement(536610..537212) 1 NC_011126.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sul:SYO3AOP1_0432 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 537212 6743397 HY04AAS1_0601 Hydrogenobaculum sp. Y04AAS1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_002121266.1 536610 R 380749 CDS YP_002121267.1 195952977 6743398 complement(537279..537422) 1 NC_011126.1 hypothetical protein 537422 6743398 HY04AAS1_0602 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121267.1 537279 R 380749 CDS YP_002121268.1 195952978 6743399 complement(537419..538492) 1 NC_011126.1 KEGG: aae:aq_2151 twitching mobility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 538492 6743399 HY04AAS1_0603 Hydrogenobaculum sp. Y04AAS1 twitching motility protein YP_002121268.1 537419 R 380749 CDS YP_002121269.1 195952979 6743400 complement(538513..539391) 1 NC_011126.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aae:aq_1137 hypothetical protein; integrase family protein 539391 6743400 HY04AAS1_0604 Hydrogenobaculum sp. Y04AAS1 integrase family protein YP_002121269.1 538513 R 380749 CDS YP_002121270.1 195952980 6743401 complement(539388..540386) 1 NC_011126.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 540386 6743401 HY04AAS1_0605 Hydrogenobaculum sp. Y04AAS1 malate dehydrogenase YP_002121270.1 539388 R 380749 CDS YP_002121271.1 195952981 6743402 complement(540389..542356) 1 NC_011126.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 542356 6743402 HY04AAS1_0606 Hydrogenobaculum sp. Y04AAS1 aconitate hydratase YP_002121271.1 540389 R 380749 CDS YP_002121272.1 195952982 6743403 complement(542375..543520) 1 NC_011126.1 PFAM: protein of unknown function DUF100; KEGG: aae:aq_1790 hypothetical protein; hypothetical protein 543520 6743403 HY04AAS1_0607 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121272.1 542375 R 380749 CDS YP_002121273.1 195952983 6743404 543603..544130 1 NC_011126.1 KEGG: sul:SYO3AOP1_1489 hypothetical protein; hypothetical protein 544130 6743404 HY04AAS1_0608 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121273.1 543603 D 380749 CDS YP_002121274.1 195952984 6743405 complement(544135..544482) 1 NC_011126.1 hypothetical protein 544482 6743405 HY04AAS1_0609 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121274.1 544135 R 380749 CDS YP_002121275.1 195952985 6743406 complement(544479..545702) 1 NC_011126.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: aae:aq_1229 transporter (major facilitator family); major facilitator superfamily protein 545702 6743406 HY04AAS1_0610 Hydrogenobaculum sp. Y04AAS1 major facilitator superfamily protein YP_002121275.1 544479 R 380749 CDS YP_002121276.1 195952986 6743408 545913..546791 1 NC_011126.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: aae:aq_1705 UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase 546791 6743408 HY04AAS1_0611 Hydrogenobaculum sp. Y04AAS1 UTP-glucose-1-phosphate uridylyltransferase YP_002121276.1 545913 D 380749 CDS YP_002121277.1 195952987 6743409 546778..548673 1 NC_011126.1 KEGG: cau:Caur_1161 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching enzyme 548673 6743409 HY04AAS1_0612 Hydrogenobaculum sp. Y04AAS1 1,4-alpha-glucan branching enzyme YP_002121277.1 546778 D 380749 CDS YP_002121278.1 195952988 6743410 548716..548847 1 NC_011126.1 hypothetical protein 548847 6743410 HY04AAS1_0613 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121278.1 548716 D 380749 CDS YP_002121279.1 195952989 6743411 complement(548844..550235) 1 NC_011126.1 KEGG: aae:aq_920 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; Tetratricopeptide domain protein; signal recognition particle-docking protein FtsY 550235 6743411 HY04AAS1_0614 Hydrogenobaculum sp. Y04AAS1 signal recognition particle-docking protein FtsY YP_002121279.1 548844 R 380749 CDS YP_002121280.1 195952990 6743412 complement(550271..550690) 1 NC_011126.1 PFAM: ferric-uptake regulator; KEGG: pth:PTH_0045 Fe2+/Zn2+ uptake regulation proteins; Fur family ferric uptake regulator 550690 6743412 HY04AAS1_0615 Hydrogenobaculum sp. Y04AAS1 Fur family ferric uptake regulator YP_002121280.1 550271 R 380749 CDS YP_002121281.1 195952991 6743413 550856..551218 1 NC_011126.1 hypothetical protein 551218 6743413 HY04AAS1_0616 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121281.1 550856 D 380749 CDS YP_002121282.1 195952992 6743414 551215..551325 1 NC_011126.1 hypothetical protein 551325 6743414 HY04AAS1_0617 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121282.1 551215 D 380749 CDS YP_002121283.1 195952993 6743415 551347..552366 1 NC_011126.1 KEGG: ehi:EHI_173410 mucin-2 precursor; hypothetical protein 552366 6743415 HY04AAS1_0618 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121283.1 551347 D 380749 CDS YP_002121284.1 195952994 6743417 552746..554767 1 NC_011126.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aae:aq_529 outer membrane protein c; TonB-dependent receptor 554767 6743417 HY04AAS1_0619 Hydrogenobaculum sp. Y04AAS1 TonB-dependent receptor YP_002121284.1 552746 D 380749 CDS YP_002121285.1 195952995 6743418 554868..555179 1 NC_011126.1 PFAM: regulatory protein ArsR; KEGG: sul:SYO3AOP1_0374 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 555179 6743418 HY04AAS1_0620 Hydrogenobaculum sp. Y04AAS1 ArsR family transcriptional regulator YP_002121285.1 554868 D 380749 CDS YP_002121286.1 195952996 6743419 555160..555486 1 NC_011126.1 TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: aae:aq_1916 thioredoxin; thioredoxin 555486 6743419 HY04AAS1_0621 Hydrogenobaculum sp. Y04AAS1 thioredoxin YP_002121286.1 555160 D 380749 CDS YP_002121287.1 195952997 6743420 555483..556421 1 NC_011126.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tte:TTE1881 thioredoxin reductase; thioredoxin reductase 556421 6743420 HY04AAS1_0622 Hydrogenobaculum sp. Y04AAS1 thioredoxin reductase YP_002121287.1 555483 D 380749 CDS YP_002121288.1 195952998 6743421 556428..557486 1 NC_011126.1 PFAM: type IV pilus assembly PilZ; KEGG: aae:aq_1917 protein; type IV pilus assembly PilZ 557486 6743421 HY04AAS1_0623 Hydrogenobaculum sp. Y04AAS1 type IV pilus assembly PilZ YP_002121288.1 556428 D 380749 CDS YP_002121289.1 195952999 6743422 557483..558304 1 NC_011126.1 PFAM: oxidoreductase domain protein; KEGG: aae:aq_440 hypothetical protein; oxidoreductase domain-containing protein 558304 6743422 HY04AAS1_0624 Hydrogenobaculum sp. Y04AAS1 oxidoreductase domain-containing protein YP_002121289.1 557483 D 380749 CDS YP_002121290.1 195953000 6743423 558285..559439 1 NC_011126.1 PFAM: RNA binding S1 domain protein; KEGG: aae:aq_1275 cytoplasmic axial filament protein; RNA binding S1 domain-containing protein 559439 6743423 HY04AAS1_0625 Hydrogenobaculum sp. Y04AAS1 RNA binding S1 domain-containing protein YP_002121290.1 558285 D 380749 CDS YP_002121291.1 195953001 6743424 559485..560723 1 NC_011126.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 560723 6743424 HY04AAS1_0626 Hydrogenobaculum sp. Y04AAS1 threonine synthase YP_002121291.1 559485 D 380749 CDS YP_002121292.1 195953002 6743425 560725..560823 1 NC_011126.1 hypothetical protein 560823 6743425 HY04AAS1_0627 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121292.1 560725 D 380749 CDS YP_002121293.1 195953003 6743426 560828..561604 1 NC_011126.1 PFAM: ribonuclease BN; KEGG: aae:aq_453 protein; ribonuclease BN 561604 6743426 HY04AAS1_0628 Hydrogenobaculum sp. Y04AAS1 ribonuclease BN YP_002121293.1 560828 D 380749 CDS YP_002121294.1 195953004 6743427 561646..561945 1 NC_011126.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: aae:aq_357a anti sigma factor; anti-sigma-28 factor FlgM 561945 6743427 HY04AAS1_0629 Hydrogenobaculum sp. Y04AAS1 anti-sigma-28 factor FlgM YP_002121294.1 561646 D 380749 CDS YP_002121295.1 195953005 6743429 complement(562031..563458) 1 NC_011126.1 PFAM: Chloride channel core; KEGG: pla:Plav_2437 chloride channel core; chloride channel core protein 563458 6743429 HY04AAS1_0630 Hydrogenobaculum sp. Y04AAS1 chloride channel core protein YP_002121295.1 562031 R 380749 CDS YP_002121296.1 195953006 6743430 563496..565355 1 NC_011126.1 catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 565355 6743430 HY04AAS1_0631 Hydrogenobaculum sp. Y04AAS1 pyruvate carboxylase subunit B YP_002121296.1 563496 D 380749 CDS YP_002121297.1 195953007 6743431 565348..565962 1 NC_011126.1 KEGG: aae:aq_1613 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 565962 6743431 HY04AAS1_0632 Hydrogenobaculum sp. Y04AAS1 ATP phosphoribosyltransferase YP_002121297.1 565348 D 380749 CDS YP_002121298.1 195953008 6743432 565972..566706 1 NC_011126.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_0834 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 566706 6743432 HY04AAS1_0633 Hydrogenobaculum sp. Y04AAS1 MotA/TolQ/ExbB proton channel YP_002121298.1 565972 D 380749 CDS YP_002121299.1 195953009 6743433 566712..567527 1 NC_011126.1 PFAM: OmpA/MotB domain protein; KEGG: sul:SYO3AOP1_0835 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 567527 6743433 HY04AAS1_0634 Hydrogenobaculum sp. Y04AAS1 OmpA/MotB domain-containing protein YP_002121299.1 566712 D 380749 CDS YP_002121300.1 195953010 6743434 567557..569257 1 NC_011126.1 KEGG: aae:aq_594 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 569257 6743434 HY04AAS1_0635 Hydrogenobaculum sp. Y04AAS1 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_002121300.1 567557 D 380749 CDS YP_002121301.1 195953011 6743435 569257..571584 1 NC_011126.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aae:aq_1300 outer membrane protein; outer membrane protein assembly complex, YaeT protein 571584 6743435 HY04AAS1_0636 Hydrogenobaculum sp. Y04AAS1 outer membrane protein assembly complex, YaeT protein YP_002121301.1 569257 D 380749 CDS YP_002121302.1 195953012 6743437 571720..572898 1 NC_011126.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 572898 6743437 HY04AAS1_0637 Hydrogenobaculum sp. Y04AAS1 tyrosyl-tRNA synthetase YP_002121302.1 571720 D 380749 CDS YP_002121303.1 195953013 6743438 572895..574205 1 NC_011126.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sul:SYO3AOP1_1757 nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 574205 6743438 HY04AAS1_0638 Hydrogenobaculum sp. Y04AAS1 nucleotide sugar dehydrogenase YP_002121303.1 572895 D 380749 CDS YP_002121304.1 195953014 6743439 574205..574624 1 NC_011126.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: aae:aq_133 transcription termination NusB; NusB antitermination factor 574624 6743439 HY04AAS1_0639 Hydrogenobaculum sp. Y04AAS1 NusB antitermination factor YP_002121304.1 574205 D 380749 CDS YP_002121305.1 195953015 6743440 574617..575303 1 NC_011126.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: aae:aq_1771 uroporphyrinogen-III synthase; Uroporphyrinogen III synthase HEM4 575303 6743440 HY04AAS1_0640 Hydrogenobaculum sp. Y04AAS1 Uroporphyrinogen III synthase HEM4 YP_002121305.1 574617 D 380749 CDS YP_002121306.1 195953016 6743441 575323..576198 1 NC_011126.1 PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: aae:aq_1772 UDP-3-0-acyl N-acetylglcosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 576198 6743441 HY04AAS1_0641 Hydrogenobaculum sp. Y04AAS1 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_002121306.1 575323 D 380749 CDS YP_002121307.1 195953017 6743442 576262..577089 1 NC_011126.1 KEGG: aae:aq_2093 thiol:disulfide interchange protein; thiol:disulfide interchange protein 577089 6743442 HY04AAS1_0642 Hydrogenobaculum sp. Y04AAS1 thiol:disulfide interchange protein YP_002121307.1 576262 D 380749 CDS YP_002121308.1 195953018 6743443 577118..578257 1 NC_011126.1 PFAM: histone deacetylase superfamily; KEGG: aae:aq_1023 acetoin utilization protein; histone deacetylase superfamily 578257 6743443 HY04AAS1_0643 Hydrogenobaculum sp. Y04AAS1 histone deacetylase superfamily YP_002121308.1 577118 D 380749 CDS YP_002121309.1 195953019 6743444 578310..579041 1 NC_011126.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: aae:aq_490 transcriptional regulator (Crp/Fnr family); Crp/Fnr family transcriptional regulator 579041 6743444 HY04AAS1_0644 Hydrogenobaculum sp. Y04AAS1 Crp/Fnr family transcriptional regulator YP_002121309.1 578310 D 380749 CDS YP_002121310.1 195953020 6743445 579066..580589 1 NC_011126.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: aae:aq_236 GMP synthase; GMP synthase, large subunit 580589 6743445 HY04AAS1_0645 Hydrogenobaculum sp. Y04AAS1 GMP synthase, large subunit YP_002121310.1 579066 D 380749 CDS YP_002121311.1 195953021 6743446 580594..581316 1 NC_011126.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 581316 6743446 HY04AAS1_0646 Hydrogenobaculum sp. Y04AAS1 pyridoxine 5'-phosphate synthase YP_002121311.1 580594 D 380749 CDS YP_002121312.1 195953022 6743447 581313..581753 1 NC_011126.1 TIGRFAM: DNA ligase D, 3'-phosphoesterase domain protein; KEGG: mma:MM_0209 hypothetical protein; DNA ligase D, 3'-phosphoesterase domain-containing protein 581753 6743447 HY04AAS1_0647 Hydrogenobaculum sp. Y04AAS1 DNA ligase D, 3'-phosphoesterase domain-containing protein YP_002121312.1 581313 D 380749 CDS YP_002121313.1 195953023 6743448 581794..582792 1 NC_011126.1 PFAM: flagellar motor switch protein FliG; KEGG: aae:aq_653 flagellar switch protein FliG; flagellar motor switch protein FliG 582792 6743448 HY04AAS1_0648 Hydrogenobaculum sp. Y04AAS1 flagellar motor switch protein FliG YP_002121313.1 581794 D 380749 CDS YP_002121314.1 195953024 6743449 582785..583534 1 NC_011126.1 KEGG: mja:MJ1643 chromosome segretation protein (smc1); hypothetical protein 583534 6743449 HY04AAS1_0649 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121314.1 582785 D 380749 CDS YP_002121315.1 195953025 6743450 583500..584777 1 NC_011126.1 KEGG: aae:aq_1595 flagellar export protein; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; FliI/YscN family ATPase 584777 6743450 HY04AAS1_0650 Hydrogenobaculum sp. Y04AAS1 FliI/YscN family ATPase YP_002121315.1 583500 D 380749 CDS YP_002121316.1 195953026 6743451 584788..585510 1 NC_011126.1 KEGG: aae:aq_1858 flagellar hook assembly protein; flagellar hook assembly protein 585510 6743451 HY04AAS1_0651 Hydrogenobaculum sp. Y04AAS1 flagellar hook assembly protein YP_002121316.1 584788 D 380749 CDS YP_002121317.1 195953027 6743452 585522..587273 1 NC_011126.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: nis:NIS_0628 flagellar basal body and hook protein FlgE; hypothetical protein 587273 6743452 HY04AAS1_0652 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121317.1 585522 D 380749 CDS YP_002121318.1 195953028 6743453 587285..587770 1 NC_011126.1 PFAM: flagellar basal body-associated protein FliL; KEGG: aae:aq_1860 flagellar biosynthesis FliL; flagellar basal body-associated protein FliL 587770 6743453 HY04AAS1_0653 Hydrogenobaculum sp. Y04AAS1 flagellar basal body-associated protein FliL YP_002121318.1 587285 D 380749 CDS YP_002121319.1 195953029 6743454 587775..588047 1 NC_011126.1 hypothetical protein 588047 6743454 HY04AAS1_0654 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121319.1 587775 D 380749 CDS YP_002121320.1 195953030 6743455 588025..588783 1 NC_011126.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 588783 fliP 6743455 fliP Hydrogenobaculum sp. Y04AAS1 flagellar biosynthesis protein FliP YP_002121320.1 588025 D 380749 CDS YP_002121321.1 195953031 6743456 588780..589049 1 NC_011126.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: aae:aq_1962 flagellar biosynthesis protein FliQ; flagellar biosynthetic protein FliQ 589049 6743456 HY04AAS1_0656 Hydrogenobaculum sp. Y04AAS1 flagellar biosynthetic protein FliQ YP_002121321.1 588780 D 380749 CDS YP_002121322.1 195953032 6743457 589051..589827 1 NC_011126.1 PFAM: type III secretion system inner membrane R protein; KEGG: aae:aq_1961 flagellar biosynthetic protein FliR; type III secretion system inner membrane R protein 589827 6743457 HY04AAS1_0657 Hydrogenobaculum sp. Y04AAS1 type III secretion system inner membrane R protein YP_002121322.1 589051 D 380749 CDS YP_002121323.1 195953033 6743458 589811..590872 1 NC_011126.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: aae:aq_2014 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 590872 6743458 HY04AAS1_0658 Hydrogenobaculum sp. Y04AAS1 flagellar biosynthetic protein FlhB YP_002121323.1 589811 D 380749 CDS YP_002121324.1 195953034 6743459 590869..591507 1 NC_011126.1 PFAM: Radical SAM domain protein; KEGG: aae:aq_2035 hypothetical protein; Radical SAM domain-containing protein 591507 6743459 HY04AAS1_0659 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121324.1 590869 D 380749 CDS YP_002121325.1 195953035 6743460 591507..591968 1 NC_011126.1 PFAM: ribonuclease H; KEGG: nis:NIS_0214 ribonuclease HI; Ribonuclease H 591968 6743460 HY04AAS1_0660 Hydrogenobaculum sp. Y04AAS1 Ribonuclease H YP_002121325.1 591507 D 380749 CDS YP_002121326.1 195953036 6743461 complement(591940..592287) 1 NC_011126.1 hypothetical protein 592287 6743461 HY04AAS1_0661 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121326.1 591940 R 380749 CDS YP_002121327.1 195953037 6743462 complement(592294..592440) 1 NC_011126.1 hypothetical protein 592440 6743462 HY04AAS1_0662 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121327.1 592294 R 380749 CDS YP_002121328.1 195953038 6743463 complement(592442..592582) 1 NC_011126.1 hypothetical protein 592582 6743463 HY04AAS1_0663 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121328.1 592442 R 380749 CDS YP_002121329.1 195953039 6743464 complement(592575..592736) 1 NC_011126.1 hypothetical protein 592736 6743464 HY04AAS1_0664 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121329.1 592575 R 380749 CDS YP_002121330.1 195953040 6743465 complement(592902..594260) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_26720 tetratricopeptide protein; hypothetical protein 594260 6743465 HY04AAS1_0665 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121330.1 592902 R 380749 CDS YP_002121331.1 195953041 6743466 complement(594280..595110) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0642 polyferredoxin-like protein; polyferredoxin-like protein 595110 6743466 HY04AAS1_0666 Hydrogenobaculum sp. Y04AAS1 polyferredoxin-like protein YP_002121331.1 594280 R 380749 CDS YP_002121332.1 195953042 6743467 complement(595205..595603) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1110 hypothetical protein; hypothetical protein 595603 6743467 HY04AAS1_0667 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121332.1 595205 R 380749 CDS YP_002121333.1 195953043 6743468 complement(595652..596566) 1 NC_011126.1 PFAM: glycosyl transferase family 9; KEGG: aae:aq_1543 ADP-heptose:LPS heptosyltransferase; glycosyl transferase family 9 596566 6743468 HY04AAS1_0668 Hydrogenobaculum sp. Y04AAS1 glycosyl transferase family 9 YP_002121333.1 595652 R 380749 CDS YP_002121334.1 195953044 6743469 complement(596559..596780) 1 NC_011126.1 KEGG: aae:aq_1106a molybdopterin converting factor, small subunit; molybdopterin converting factor, small subunit 596780 6743469 HY04AAS1_0669 Hydrogenobaculum sp. Y04AAS1 molybdopterin converting factor, small subunit YP_002121334.1 596559 R 380749 CDS YP_002121335.1 195953045 6743470 complement(596777..598171) 1 NC_011126.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 598171 gltX 6743470 gltX Hydrogenobaculum sp. Y04AAS1 glutamyl-tRNA synthetase YP_002121335.1 596777 R 380749 CDS YP_002121336.1 195953046 6743471 598220..598999 1 NC_011126.1 KEGG: dps:DP0721 hypothetical protein; hypothetical protein 598999 6743471 HY04AAS1_0671 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121336.1 598220 D 380749 CDS YP_002121337.1 195953047 6743472 599080..602028 1 NC_011126.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aae:aq_1672 ATPase subunit of ATP-dependent protease; ATPase AAA-2 domain-containing protein 602028 6743472 HY04AAS1_0672 Hydrogenobaculum sp. Y04AAS1 ATPase AAA-2 domain-containing protein YP_002121337.1 599080 D 380749 CDS YP_002121338.1 195953048 6743473 602086..603276 1 NC_011126.1 PFAM: peptidase U32; KEGG: sul:SYO3AOP1_1234 peptidase U32; peptidase U32 603276 6743473 HY04AAS1_0673 Hydrogenobaculum sp. Y04AAS1 peptidase U32 YP_002121338.1 602086 D 380749 CDS YP_002121339.1 195953049 6743474 603290..604615 1 NC_011126.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 604615 proA 6743474 proA Hydrogenobaculum sp. Y04AAS1 gamma-glutamyl phosphate reductase YP_002121339.1 603290 D 380749 CDS YP_002121340.1 195953050 6743475 complement(604617..605684) 1 NC_011126.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: aae:aq_326 3-deoxy-D-manno-2-octulosonic acid transferase (KDO transferase); Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 605684 6743475 HY04AAS1_0675 Hydrogenobaculum sp. Y04AAS1 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_002121340.1 604617 R 380749 CDS YP_002121341.1 195953051 6743476 complement(605685..606782) 1 NC_011126.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: aae:aq_1763 myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase 606782 6743476 HY04AAS1_0676 Hydrogenobaculum sp. Y04AAS1 Myo-inositol-1-phosphate synthase YP_002121341.1 605685 R 380749 CDS YP_002121342.1 195953052 6743477 complement(606785..607678) 1 NC_011126.1 KEGG: aae:aq_1985 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 607678 6743477 HY04AAS1_0677 Hydrogenobaculum sp. Y04AAS1 dephospho-CoA kinase YP_002121342.1 606785 R 380749 CDS YP_002121343.1 195953053 6743478 complement(607675..609459) 1 NC_011126.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sul:SYO3AOP1_0213 GTP-binding protein TypA; GTP-binding protein TypA 609459 6743478 HY04AAS1_0678 Hydrogenobaculum sp. Y04AAS1 GTP-binding protein TypA YP_002121343.1 607675 R 380749 CDS YP_002121344.1 195953054 6743479 complement(609470..610789) 1 NC_011126.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 610789 rho 6743479 rho Hydrogenobaculum sp. Y04AAS1 transcription termination factor Rho YP_002121344.1 609470 R 380749 CDS YP_002121345.1 195953055 6743480 complement(610872..612188) 1 NC_011126.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: aae:aq_871 thiophene and furan oxidation protein; tRNA modification GTPase TrmE 612188 6743480 HY04AAS1_0680 Hydrogenobaculum sp. Y04AAS1 tRNA modification GTPase TrmE YP_002121345.1 610872 R 380749 CDS YP_002121346.1 195953056 6743483 complement(612409..612753) 1 NC_011126.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aae:aq_1857 hypothetical protein; iron-sulfur cluster assembly accessory protein 612753 6743483 HY04AAS1_0681 Hydrogenobaculum sp. Y04AAS1 iron-sulfur cluster assembly accessory protein YP_002121346.1 612409 R 380749 CDS YP_002121347.1 195953057 6743484 complement(612864..613691) 1 NC_011126.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: aae:aq_1952 hypothetical protein; biotin/lipoate A/B protein ligase 613691 6743484 HY04AAS1_0682 Hydrogenobaculum sp. Y04AAS1 biotin/lipoate A/B protein ligase YP_002121347.1 612864 R 380749 CDS YP_002121348.1 195953058 6743485 complement(613664..614122) 1 NC_011126.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1482 hypothetical protein; GCN5-like N-acetyltransferase 614122 6743485 HY04AAS1_0683 Hydrogenobaculum sp. Y04AAS1 GCN5-like N-acetyltransferase YP_002121348.1 613664 R 380749 CDS YP_002121349.1 195953059 6743486 complement(614129..614383) 1 NC_011126.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sul:SYO3AOP1_1584 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 614383 6743486 HY04AAS1_0684 Hydrogenobaculum sp. Y04AAS1 AsnC family transcriptional regulator YP_002121349.1 614129 R 380749 CDS YP_002121350.1 195953060 6743487 complement(614412..615608) 1 NC_011126.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 615608 hemA 6743487 hemA Hydrogenobaculum sp. Y04AAS1 glutamyl-tRNA reductase YP_002121350.1 614412 R 380749 CDS YP_002121351.1 195953061 6743488 complement(615598..617295) 1 NC_011126.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 617295 6743488 HY04AAS1_0686 Hydrogenobaculum sp. Y04AAS1 prolyl-tRNA synthetase YP_002121351.1 615598 R 380749 CDS YP_002121352.1 195953062 6743490 complement(617457..620435) 1 NC_011126.1 KEGG: gme:Gmet_0456 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like; hypothetical protein 620435 6743490 HY04AAS1_0687 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121352.1 617457 R 380749 CDS YP_002121353.1 195953063 6743491 complement(620540..620722) 1 NC_011126.1 hypothetical protein 620722 6743491 HY04AAS1_0688 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121353.1 620540 R 380749 CDS YP_002121354.1 195953064 6743492 complement(620712..622466) 1 NC_011126.1 KEGG: mar:MAE_46380 hypothetical protein; hypothetical protein 622466 6743492 HY04AAS1_0689 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121354.1 620712 R 380749 CDS YP_002121355.1 195953065 6743493 complement(622750..623715) 1 NC_011126.1 PFAM: Integrase catalytic region; KEGG: sul:SYO3AOP1_1393 integrase catalytic region; integrase catalytic subunit 623715 6743493 HY04AAS1_0690 Hydrogenobaculum sp. Y04AAS1 integrase catalytic subunit YP_002121355.1 622750 R 380749 CDS YP_002121356.1 195953066 6743494 complement(624089..625120) 1 NC_011126.1 KEGG: aae:aq_801 sialoglycoprotease; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; metalloendopeptidase, glycoprotease family 625120 6743494 HY04AAS1_0691 Hydrogenobaculum sp. Y04AAS1 metalloendopeptidase, glycoprotease family YP_002121356.1 624089 R 380749 CDS YP_002121357.1 195953067 6743495 complement(625124..626380) 1 NC_011126.1 KEGG: aae:aq_797 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 626380 6743495 HY04AAS1_0692 Hydrogenobaculum sp. Y04AAS1 carboxyl-terminal protease YP_002121357.1 625124 R 380749 CDS YP_002121358.1 195953068 6743496 complement(626395..626811) 1 NC_011126.1 KEGG: aae:aq_796 protein; hypothetical protein 626811 6743496 HY04AAS1_0693 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121358.1 626395 R 380749 CDS YP_002121359.1 195953069 6743498 627302..628681 1 NC_011126.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_3608 general substrate transporter; General substrate transporter 628681 6743498 HY04AAS1_0694 Hydrogenobaculum sp. Y04AAS1 General substrate transporter YP_002121359.1 627302 D 380749 CDS YP_002121360.1 195953070 6743499 628754..629542 1 NC_011126.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sul:SYO3AOP1_1139 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 629542 6743499 HY04AAS1_0695 Hydrogenobaculum sp. Y04AAS1 phospholipid/glycerol acyltransferase YP_002121360.1 628754 D 380749 CDS YP_002121361.1 195953071 6743500 629512..630246 1 NC_011126.1 KEGG: sul:SYO3AOP1_1140 deacetylase-like protein; deacetylase-like protein 630246 6743500 HY04AAS1_0696 Hydrogenobaculum sp. Y04AAS1 deacetylase-like protein YP_002121361.1 629512 D 380749 CDS YP_002121362.1 195953072 6743501 630288..632606 1 NC_011126.1 PFAM: glycosyl transferase group 1; KEGG: glo:Glov_0604 glycosyl transferase group 1; group 1 glycosyl transferase 632606 6743501 HY04AAS1_0697 Hydrogenobaculum sp. Y04AAS1 group 1 glycosyl transferase YP_002121362.1 630288 D 380749 CDS YP_002121363.1 195953073 6743502 632603..633739 1 NC_011126.1 PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1145 glycosyl transferase group 1; group 1 glycosyl transferase 633739 6743502 HY04AAS1_0698 Hydrogenobaculum sp. Y04AAS1 group 1 glycosyl transferase YP_002121363.1 632603 D 380749 CDS YP_002121364.1 195953074 6743503 complement(633707..635608) 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aoe:Clos_0999 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 635608 6743503 HY04AAS1_0699 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase/phosphodiesterase YP_002121364.1 633707 R 380749 CDS YP_002121365.1 195953075 6743504 complement(635605..636825) 1 NC_011126.1 KEGG: tte:TTE1908 hypothetical protein; hypothetical protein 636825 6743504 HY04AAS1_0700 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121365.1 635605 R 380749 CDS YP_002121366.1 195953076 6743505 complement(636815..637102) 1 NC_011126.1 hypothetical protein 637102 6743505 HY04AAS1_0701 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121366.1 636815 R 380749 CDS YP_002121367.1 195953077 6743506 637314..639503 1 NC_011126.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sul:SYO3AOP1_0734 TonB-dependent receptor; TonB-dependent receptor 639503 6743506 HY04AAS1_0702 Hydrogenobaculum sp. Y04AAS1 TonB-dependent receptor YP_002121367.1 637314 D 380749 CDS YP_002121368.1 195953078 6743507 639604..639933 1 NC_011126.1 PFAM: DNA polymerase subunit beta; KEGG: glo:Glov_3039 DNA polymerase subunit beta; DNA polymerase subunit beta 639933 6743507 HY04AAS1_0703 Hydrogenobaculum sp. Y04AAS1 DNA polymerase subunit beta YP_002121368.1 639604 D 380749 CDS YP_002121369.1 195953079 6743508 639923..640210 1 NC_011126.1 PFAM: protein of unknown function DUF86; KEGG: gur:Gura_4166 protein of unknown function DUF86; hypothetical protein 640210 6743508 HY04AAS1_0704 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121369.1 639923 D 380749 CDS YP_002121370.1 195953080 6743509 640329..642728 1 NC_011126.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_0295 TonB-dependent receptor; TonB-dependent receptor 642728 6743509 HY04AAS1_0705 Hydrogenobaculum sp. Y04AAS1 TonB-dependent receptor YP_002121370.1 640329 D 380749 CDS YP_002121371.1 195953081 6743510 642826..643263 1 NC_011126.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sul:SYO3AOP1_0735 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 643263 6743510 HY04AAS1_0706 Hydrogenobaculum sp. Y04AAS1 MotA/TolQ/ExbB proton channel YP_002121371.1 642826 D 380749 CDS YP_002121372.1 195953082 6743511 643265..643690 1 NC_011126.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sul:SYO3AOP1_0736 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR 643690 6743511 HY04AAS1_0707 Hydrogenobaculum sp. Y04AAS1 Biopolymer transport protein ExbD/TolR YP_002121372.1 643265 D 380749 CDS YP_002121373.1 195953083 6743512 643687..644457 1 NC_011126.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sul:SYO3AOP1_0737 TonB family protein; TonB family protein 644457 6743512 HY04AAS1_0708 Hydrogenobaculum sp. Y04AAS1 TonB family protein YP_002121373.1 643687 D 380749 CDS YP_002121374.1 195953084 6743513 644460..647081 1 NC_011126.1 PFAM: phosphoesterase; KEGG: sus:Acid_4558 40-residue YVTN family beta-propeller repeat protein; phosphoesterase 647081 6743513 HY04AAS1_0709 Hydrogenobaculum sp. Y04AAS1 phosphoesterase YP_002121374.1 644460 D 380749 CDS YP_002121375.1 195953085 6743514 647148..647513 1 NC_011126.1 hypothetical protein 647513 6743514 HY04AAS1_0710 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121375.1 647148 D 380749 CDS YP_002121376.1 195953086 6743515 647510..647893 1 NC_011126.1 hypothetical protein 647893 6743515 HY04AAS1_0711 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121376.1 647510 D 380749 CDS YP_002121377.1 195953087 6743516 647903..648202 1 NC_011126.1 KEGG: sul:SYO3AOP1_1342 hypothetical protein; hypothetical protein 648202 6743516 HY04AAS1_0712 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121377.1 647903 D 380749 CDS YP_002121378.1 195953088 6743517 648215..648412 1 NC_011126.1 hypothetical protein 648412 6743517 HY04AAS1_0713 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121378.1 648215 D 380749 CDS YP_002121379.1 195953089 6743518 648409..650505 1 NC_011126.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_1344 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 650505 6743518 HY04AAS1_0714 Hydrogenobaculum sp. Y04AAS1 heavy metal translocating P-type ATPase YP_002121379.1 648409 D 380749 CDS YP_002121380.1 195953090 6743519 650498..651358 1 NC_011126.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_7268 cation efflux system protein CzcD; cation diffusion facilitator family transporter 651358 6743519 HY04AAS1_0715 Hydrogenobaculum sp. Y04AAS1 cation diffusion facilitator family transporter YP_002121380.1 650498 D 380749 CDS YP_002121381.1 195953091 6743520 651379..652179 1 NC_011126.1 KEGG: sul:SYO3AOP1_1138 hypothetical protein; hypothetical protein 652179 6743520 HY04AAS1_0716 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121381.1 651379 D 380749 CDS YP_002121382.1 195953092 6743521 652228..653958 1 NC_011126.1 KEGG: gur:Gura_1227 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 653958 6743521 HY04AAS1_0717 Hydrogenobaculum sp. Y04AAS1 potassium-transporting ATPase subunit A YP_002121382.1 652228 D 380749 CDS YP_002121383.1 195953093 6743522 653955..656009 1 NC_011126.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gur:Gura_1226 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 656009 6743522 HY04AAS1_0718 Hydrogenobaculum sp. Y04AAS1 K+-transporting ATPase subunit B YP_002121383.1 653955 D 380749 CDS YP_002121384.1 195953094 6743523 656006..656602 1 NC_011126.1 PFAM: K transporting ATPase KdpC subunit; KEGG: mca:MCA2215 K+-transporting ATPase, C subunit; Potassium-transporting ATPase 656602 6743523 HY04AAS1_0719 Hydrogenobaculum sp. Y04AAS1 Potassium-transporting ATPase YP_002121384.1 656006 D 380749 CDS YP_002121385.1 195953095 6743524 656566..658497 1 NC_011126.1 PFAM: Osmosensitive K channel His kinase sensor; KEGG: gme:Gmet_2436 osmosensitive K+ channel signal transduction histidine kinase; Osmosensitive K channel His kinase sensor 658497 6743524 HY04AAS1_0720 Hydrogenobaculum sp. Y04AAS1 Osmosensitive K channel His kinase sensor YP_002121385.1 656566 D 380749 CDS YP_002121386.1 195953096 6743525 complement(658500..659240) 1 NC_011126.1 hypothetical protein 659240 6743525 HY04AAS1_0721 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121386.1 658500 R 380749 CDS YP_002121387.1 195953097 6743526 659295..659978 1 NC_011126.1 hypothetical protein 659978 6743526 HY04AAS1_0722 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121387.1 659295 D 380749 CDS YP_002121388.1 195953098 6743527 659966..660313 1 NC_011126.1 hypothetical protein 660313 6743527 HY04AAS1_0723 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121388.1 659966 D 380749 CDS YP_002121389.1 195953099 6743528 660301..660927 1 NC_011126.1 KEGG: pho:PH1798 chromosome assembly protein; hypothetical protein 660927 6743528 HY04AAS1_0724 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121389.1 660301 D 380749 CDS YP_002121390.1 195953100 6743529 660924..662390 1 NC_011126.1 KEGG: bcm:Bcenmc03_5909 type IVB pilus formation outer membrane protein, R64 PilN family; Type II secretory pathway component PulD-like 662390 6743529 HY04AAS1_0725 Hydrogenobaculum sp. Y04AAS1 Type II secretory pathway component PulD-like YP_002121390.1 660924 D 380749 CDS YP_002121391.1 195953101 6743530 662387..663106 1 NC_011126.1 hypothetical protein 663106 6743530 HY04AAS1_0726 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121391.1 662387 D 380749 CDS YP_002121392.1 195953102 6743531 663113..664213 1 NC_011126.1 hypothetical protein 664213 6743531 HY04AAS1_0727 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121392.1 663113 D 380749 CDS YP_002121393.1 195953103 6743532 664215..665195 1 NC_011126.1 KEGG: cbf:CLI_1972 bacterial type II secretion system protein F; hypothetical protein 665195 6743532 HY04AAS1_0728 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121393.1 664215 D 380749 CDS YP_002121394.1 195953104 6743533 665249..666082 1 NC_011126.1 KEGG: mmu:100040282 similar to GPI-anchored cell surface glycoprotein required for diploid pseudohyphal formation and haploid invasive growth, transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); hypothetical protein 666082 6743533 HY04AAS1_0729 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121394.1 665249 D 380749 CDS YP_002121395.1 195953105 6743534 666098..667360 1 NC_011126.1 KEGG: xla:779335 E2F transcription factor 7 Pfam: E2F_TDP; hypothetical protein 667360 6743534 HY04AAS1_0730 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121395.1 666098 D 380749 CDS YP_002121396.1 195953106 6743535 667547..668158 1 NC_011126.1 KEGG: pfh:PFHG_01528 conserved hypothetical protein; hypothetical protein 668158 6743535 HY04AAS1_0731 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121396.1 667547 D 380749 CDS YP_002121397.1 195953107 6743536 668315..669379 1 NC_011126.1 PFAM: type II secretion system protein E; KEGG: aae:aq_745 twitching motility protein PilT; type II secretion system protein E 669379 6743536 HY04AAS1_0732 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein E YP_002121397.1 668315 D 380749 CDS YP_002121398.1 195953108 6743537 669384..669629 1 NC_011126.1 hypothetical protein 669629 6743537 HY04AAS1_0733 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121398.1 669384 D 380749 CDS YP_002121399.1 195953109 6743538 complement(669626..670081) 1 NC_011126.1 PFAM: SNARE associated Golgi protein; KEGG: aae:aq_2066 hypothetical protein; hypothetical protein 670081 6743538 HY04AAS1_0734 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121399.1 669626 R 380749 CDS YP_002121400.1 195953110 6743539 670248..670685 1 NC_011126.1 PFAM: heat shock protein Hsp20; KEGG: aae:aq_1283 small heat shock protein (class I); heat shock protein Hsp20 670685 6743539 HY04AAS1_0735 Hydrogenobaculum sp. Y04AAS1 heat shock protein Hsp20 YP_002121400.1 670248 D 380749 CDS YP_002121401.1 195953111 6743541 670889..671524 1 NC_011126.1 PFAM: nitroreductase; KEGG: nis:NIS_1849 NAD(P)H-flavin oxidoreductase; nitroreductase 671524 6743541 HY04AAS1_0736 Hydrogenobaculum sp. Y04AAS1 nitroreductase YP_002121401.1 670889 D 380749 CDS YP_002121402.1 195953112 6743542 671521..672000 1 NC_011126.1 KEGG: aae:aq_1631 protein; hypothetical protein 672000 6743542 HY04AAS1_0737 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121402.1 671521 D 380749 CDS YP_002121403.1 195953113 6743543 complement(671954..673462) 1 NC_011126.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: aae:aq_1365 hypothetical protein; carbohydrate kinase 673462 6743543 HY04AAS1_0738 Hydrogenobaculum sp. Y04AAS1 carbohydrate kinase YP_002121403.1 671954 R 380749 CDS YP_002121404.1 195953114 6743544 complement(673459..674646) 1 NC_011126.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 674646 pgk 6743544 pgk Hydrogenobaculum sp. Y04AAS1 phosphoglycerate kinase YP_002121404.1 673459 R 380749 CDS YP_002121405.1 195953115 6743545 674728..675651 1 NC_011126.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: aae:aq_892 malonyl-CoA:acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 675651 6743545 HY04AAS1_0740 Hydrogenobaculum sp. Y04AAS1 malonyl CoA-acyl carrier protein transacylase YP_002121405.1 674728 D 380749 CDS YP_002121406.1 195953116 6743546 675648..676322 1 NC_011126.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: aae:aq_655 fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 676322 6743546 HY04AAS1_0741 Hydrogenobaculum sp. Y04AAS1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_002121406.1 675648 D 380749 CDS YP_002121407.1 195953117 6743547 676337..676669 1 NC_011126.1 KEGG: aae:aq_419 hypothetical protein; hypothetical protein 676669 6743547 HY04AAS1_0742 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121407.1 676337 D 380749 CDS YP_002121408.1 195953118 6743548 676669..677175 1 NC_011126.1 PFAM: histidine triad (HIT) protein; KEGG: aae:aq_2159 hypothetical protein; histidine triad (HIT) protein 677175 6743548 HY04AAS1_0743 Hydrogenobaculum sp. Y04AAS1 histidine triad (HIT) protein YP_002121408.1 676669 D 380749 CDS YP_002121409.1 195953119 6743549 677218..677421 1 NC_011126.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 677421 rpsU 6743549 rpsU Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S21 YP_002121409.1 677218 D 380749 CDS YP_002121410.1 195953120 6743550 677421..678620 1 NC_011126.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase 678620 6743550 HY04AAS1_0745 Hydrogenobaculum sp. Y04AAS1 S-adenosylmethionine synthetase YP_002121410.1 677421 D 380749 CDS YP_002121411.1 195953121 6743551 678640..678987 1 NC_011126.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aae:aq_1310 NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 678987 6743551 HY04AAS1_0746 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002121411.1 678640 D 380749 CDS YP_002121412.1 195953122 6743552 679013..679546 1 NC_011126.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 679546 6743552 HY04AAS1_0747 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase subunit B YP_002121412.1 679013 D 380749 CDS YP_002121413.1 195953123 6743553 679548..681308 1 NC_011126.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: aae:aq_1314 NADH dehydrogenase I chain C; chain D; NADH-ubiquinone oxidoreductase chain 49kDa 681308 6743553 HY04AAS1_0748 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone oxidoreductase chain 49kDa YP_002121413.1 679548 D 380749 CDS YP_002121414.1 195953124 6743554 681305..682318 1 NC_011126.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: aae:aq_1315 NADH dehydrogenase I chain H; NADH dehydrogenase (quinone) 682318 6743554 HY04AAS1_0749 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002121414.1 681305 D 380749 CDS YP_002121415.1 195953125 6743555 682329..682937 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_1317 NADH dehydrogenase I chain I; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 682937 6743555 HY04AAS1_0750 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002121415.1 682329 D 380749 CDS YP_002121416.1 195953126 6743556 682925..683422 1 NC_011126.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: aae:aq_1318 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 683422 6743556 HY04AAS1_0751 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002121416.1 682925 D 380749 CDS YP_002121417.1 195953127 6743557 683415..683711 1 NC_011126.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aae:aq_1319 NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase chain 4L 683711 6743557 HY04AAS1_0752 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone oxidoreductase chain 4L YP_002121417.1 683415 D 380749 CDS YP_002121418.1 195953128 6743558 683711..685612 1 NC_011126.1 KEGG: aae:aq_1379 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase subunit 5 domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 685612 6743558 HY04AAS1_0753 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit L YP_002121418.1 683711 D 380749 CDS YP_002121419.1 195953129 6743559 685613..687118 1 NC_011126.1 KEGG: aae:aq_1382 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 687118 6743559 HY04AAS1_0754 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit M YP_002121419.1 685613 D 380749 CDS YP_002121420.1 195953130 6743560 687122..688603 1 NC_011126.1 KEGG: aae:aq_1383 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 688603 6743560 HY04AAS1_0755 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit N YP_002121420.1 687122 D 380749 CDS YP_002121421.1 195953131 6743561 688609..688980 1 NC_011126.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: aae:aq_1385 NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 688980 6743561 HY04AAS1_0756 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002121421.1 688609 D 380749 CDS YP_002121422.1 195953132 6743562 688980..690695 1 NC_011126.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: aae:aq_551 NADH dehydrogenase I chain C ; chain D; NADH-ubiquinone oxidoreductase chain 49kDa 690695 6743562 HY04AAS1_0757 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone oxidoreductase chain 49kDa YP_002121422.1 688980 D 380749 CDS YP_002121423.1 195953133 6743563 690692..691738 1 NC_011126.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sul:SYO3AOP1_0881 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 691738 6743563 HY04AAS1_0758 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002121423.1 690692 D 380749 CDS YP_002121424.1 195953134 6743564 691743..692369 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_1375 NADH dehydrogenase I chain I; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 692369 6743564 HY04AAS1_0759 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002121424.1 691743 D 380749 CDS YP_002121425.1 195953135 6743565 692362..692883 1 NC_011126.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: aae:aq_1377 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 692883 6743565 HY04AAS1_0760 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002121425.1 692362 D 380749 CDS YP_002121426.1 195953136 6743566 692876..693208 1 NC_011126.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aae:aq_1378 NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase chain 4L 693208 6743566 HY04AAS1_0761 Hydrogenobaculum sp. Y04AAS1 NADH-ubiquinone oxidoreductase chain 4L YP_002121426.1 692876 D 380749 CDS YP_002121427.1 195953137 6743567 693211..695049 1 NC_011126.1 KEGG: aae:aq_1320 NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase subunit 5 domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 695049 6743567 HY04AAS1_0762 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit L YP_002121427.1 693211 D 380749 CDS YP_002121428.1 195953138 6743568 695042..696520 1 NC_011126.1 KEGG: aae:aq_1321 NADH dehydrogenase I chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 696520 6743568 HY04AAS1_0763 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit M YP_002121428.1 695042 D 380749 CDS YP_002121429.1 195953139 6743569 696520..697914 1 NC_011126.1 KEGG: aae:aq_1322 NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 697914 6743569 HY04AAS1_0764 Hydrogenobaculum sp. Y04AAS1 proton-translocating NADH-quinone oxidoreductase subunit N YP_002121429.1 696520 D 380749 CDS YP_002121430.1 195953140 6743570 697907..698557 1 NC_011126.1 KEGG: sul:SYO3AOP1_0874 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; Guanylate kinase 698557 6743570 HY04AAS1_0765 Hydrogenobaculum sp. Y04AAS1 Guanylate kinase YP_002121430.1 697907 D 380749 CDS YP_002121431.1 195953141 6743571 698532..698759 1 NC_011126.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: aae:aq_183a RNA polymerase omega chain; DNA-directed RNA polymerase subunit omega 698759 6743571 HY04AAS1_0766 Hydrogenobaculum sp. Y04AAS1 DNA-directed RNA polymerase subunit omega YP_002121431.1 698532 D 380749 CDS YP_002121432.1 195953142 6743572 698740..699987 1 NC_011126.1 PFAM: peptidase M16 domain protein; KEGG: aae:aq_1271 processing protease; peptidase M16 domain-containing protein 699987 6743572 HY04AAS1_0767 Hydrogenobaculum sp. Y04AAS1 peptidase M16 domain-containing protein YP_002121432.1 698740 D 380749 CDS YP_002121433.1 195953143 6743573 699984..701339 1 NC_011126.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: sul:SYO3AOP1_0851 beta-lactamase domain protein; beta-lactamase domain-containing protein 701339 6743573 HY04AAS1_0768 Hydrogenobaculum sp. Y04AAS1 beta-lactamase domain-containing protein YP_002121433.1 699984 D 380749 CDS YP_002121434.1 195953144 6743574 701332..701424 1 NC_011126.1 hypothetical protein 701424 6743574 HY04AAS1_0769 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121434.1 701332 D 380749 CDS YP_002121435.1 195953145 6743575 701425..702564 1 NC_011126.1 KEGG: mar:MAE_45070 hypothetical protein; hypothetical protein 702564 6743575 HY04AAS1_0770 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121435.1 701425 D 380749 CDS YP_002121436.1 195953146 6743576 complement(702549..702824) 1 NC_011126.1 hypothetical protein 702824 6743576 HY04AAS1_0771 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121436.1 702549 R 380749 CDS YP_002121437.1 195953147 6743577 complement(702866..705751) 1 NC_011126.1 PFAM: SMC domain protein; KEGG: aae:aq_1006 exonuclease SbcC; SMC domain-containing protein 705751 6743577 HY04AAS1_0772 Hydrogenobaculum sp. Y04AAS1 SMC domain-containing protein YP_002121437.1 702866 R 380749 CDS YP_002121438.1 195953148 6743578 complement(705748..706101) 1 NC_011126.1 PFAM: Rhodanese domain protein; KEGG: aae:aq_477 hypothetical protein; Rhodanese domain-containing protein 706101 6743578 HY04AAS1_0773 Hydrogenobaculum sp. Y04AAS1 Rhodanese domain-containing protein YP_002121438.1 705748 R 380749 CDS YP_002121439.1 195953149 6743579 complement(706085..706462) 1 NC_011126.1 KEGG: aae:aq_476 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 706462 6743579 HY04AAS1_0774 Hydrogenobaculum sp. Y04AAS1 aspartate 1-decarboxylase YP_002121439.1 706085 R 380749 CDS YP_002121440.1 195953150 6743580 complement(706529..709342) 1 NC_011126.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: aae:aq_305 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 709342 6743580 HY04AAS1_0775 Hydrogenobaculum sp. Y04AAS1 isoleucyl-tRNA synthetase YP_002121440.1 706529 R 380749 CDS YP_002121441.1 195953151 6743581 709680..710897 1 NC_011126.1 KEGG: aae:aq_271 protein; hypothetical protein 710897 6743581 HY04AAS1_0776 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121441.1 709680 D 380749 CDS YP_002121442.1 195953152 6743582 710923..711870 1 NC_011126.1 KEGG: aae:aq_1656 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 711870 6743582 HY04AAS1_0777 Hydrogenobaculum sp. Y04AAS1 tetraacyldisaccharide 4'-kinase YP_002121442.1 710923 D 380749 CDS YP_002121443.1 195953153 6743583 711857..712606 1 NC_011126.1 KEGG: dre:100003536 hypothetical protein LOC100003536; hypothetical protein 712606 6743583 HY04AAS1_0778 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121443.1 711857 D 380749 CDS YP_002121444.1 195953154 6743584 712627..714054 1 NC_011126.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1470 biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 714054 6743584 HY04AAS1_0779 Hydrogenobaculum sp. Y04AAS1 acetyl-CoA carboxylase, biotin carboxylase YP_002121444.1 712627 D 380749 CDS YP_002121445.1 195953155 6743585 714051..714794 1 NC_011126.1 KEGG: aae:aq_166 pyrroline carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 714794 6743585 HY04AAS1_0780 Hydrogenobaculum sp. Y04AAS1 pyrroline-5-carboxylate reductase YP_002121445.1 714051 D 380749 CDS YP_002121446.1 195953156 6743586 714791..716335 1 NC_011126.1 PFAM: SMC domain protein; KEGG: aae:aq_561 recombination protein RecN; SMC domain-containing protein 716335 6743586 HY04AAS1_0781 Hydrogenobaculum sp. Y04AAS1 SMC domain-containing protein YP_002121446.1 714791 D 380749 CDS YP_002121447.1 195953157 6743587 716369..717373 1 NC_011126.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aae:aq_1331 cation efflux system (CzcB-like); RND family efflux transporter MFP subunit 717373 6743587 HY04AAS1_0782 Hydrogenobaculum sp. Y04AAS1 RND family efflux transporter MFP subunit YP_002121447.1 716369 D 380749 CDS YP_002121448.1 195953158 6743588 717370..720417 1 NC_011126.1 PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_0349 acriflavin resistance protein; acriflavin resistance protein 720417 6743588 HY04AAS1_0783 Hydrogenobaculum sp. Y04AAS1 acriflavin resistance protein YP_002121448.1 717370 D 380749 CDS YP_002121449.1 195953159 6743589 720468..721331 1 NC_011126.1 PFAM: ribosomal L11 methyltransferase; KEGG: aae:aq_2102 50S ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase 721331 6743589 HY04AAS1_0784 Hydrogenobaculum sp. Y04AAS1 ribosomal L11 methyltransferase YP_002121449.1 720468 D 380749 CDS YP_002121450.1 195953160 6743590 721332..723806 1 NC_011126.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine-binding; KEGG: aae:aq_999 long-chain-fatty-acid CoA ligase; AMP-dependent synthetase and ligase 723806 6743590 HY04AAS1_0785 Hydrogenobaculum sp. Y04AAS1 AMP-dependent synthetase and ligase YP_002121450.1 721332 D 380749 CDS YP_002121451.1 195953161 6743591 723890..725473 1 NC_011126.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 725473 6743591 HY04AAS1_0786 Hydrogenobaculum sp. Y04AAS1 D-3-phosphoglycerate dehydrogenase YP_002121451.1 723890 D 380749 CDS YP_002121452.1 195953162 6743592 725470..726684 1 NC_011126.1 KEGG: aae:aq_1152 aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 726684 6743592 HY04AAS1_0787 Hydrogenobaculum sp. Y04AAS1 aspartate kinase YP_002121452.1 725470 D 380749 CDS YP_002121453.1 195953163 6743593 726674..727600 1 NC_011126.1 PFAM: PfkB domain protein; KEGG: aae:aq_565 ADP-heptose synthase; PfkB domain-containing protein 727600 6743593 HY04AAS1_0788 Hydrogenobaculum sp. Y04AAS1 PfkB domain-containing protein YP_002121453.1 726674 D 380749 CDS YP_002121454.1 195953164 6743594 complement(727597..727902) 1 NC_011126.1 hypothetical protein 727902 6743594 HY04AAS1_0789 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121454.1 727597 R 380749 CDS YP_002121455.1 195953165 6743595 728007..729278 1 NC_011126.1 PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_1614 outer membrane efflux protein; outer membrane efflux protein 729278 6743595 HY04AAS1_0790 Hydrogenobaculum sp. Y04AAS1 outer membrane efflux protein YP_002121455.1 728007 D 380749 CDS YP_002121456.1 195953166 6743596 729275..730396 1 NC_011126.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sul:SYO3AOP1_1613 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 730396 6743596 HY04AAS1_0791 Hydrogenobaculum sp. Y04AAS1 RND family efflux transporter MFP subunit YP_002121456.1 729275 D 380749 CDS YP_002121457.1 195953167 6743597 730401..733484 1 NC_011126.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sul:SYO3AOP1_1612 acriflavin resistance protein; heavy metal efflux pump, CzcA family 733484 6743597 HY04AAS1_0792 Hydrogenobaculum sp. Y04AAS1 heavy metal efflux pump, CzcA family YP_002121457.1 730401 D 380749 CDS YP_002121458.1 195953168 6743598 complement(733635..734900) 1 NC_011126.1 KEGG: mbn:Mboo_1434 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 734900 6743598 HY04AAS1_0793 Hydrogenobaculum sp. Y04AAS1 natural resistance-associated macrophage protein YP_002121458.1 733635 R 380749 CDS YP_002121459.1 195953169 6743599 complement(734922..736343) 1 NC_011126.1 PFAM: Carbohydrate-selective porin OprB; KEGG: sus:Acid_2724 carbohydrate-selective porin OprB; Carbohydrate-selective porin OprB 736343 6743599 HY04AAS1_0794 Hydrogenobaculum sp. Y04AAS1 Carbohydrate-selective porin OprB YP_002121459.1 734922 R 380749 CDS YP_002121460.1 195953170 6743600 complement(736560..738059) 1 NC_011126.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 738059 6743600 HY04AAS1_0795 Hydrogenobaculum sp. Y04AAS1 EmrB/QacA subfamily drug resistance transporter YP_002121460.1 736560 R 380749 CDS YP_002121461.1 195953171 6743601 738124..738390 1 NC_011126.1 KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 738390 6743601 HY04AAS1_0796 Hydrogenobaculum sp. Y04AAS1 transcriptional coactivator/pterin dehydratase YP_002121461.1 738124 D 380749 CDS YP_002121462.1 195953172 6743602 738395..739666 1 NC_011126.1 PFAM: glycosyl transferase family 39; KEGG: aae:aq_1695a hypothetical protein; glycosyl transferase family 39 739666 6743602 HY04AAS1_0797 Hydrogenobaculum sp. Y04AAS1 glycosyl transferase family 39 YP_002121462.1 738395 D 380749 CDS YP_002121463.1 195953173 6743603 739728..740498 1 NC_011126.1 PFAM: 17 kDa surface antigen; TraT complement resistance family protein; KEGG: eba:p1B335 TraT complement resistance protein precursor; TraT complement resistance family protein 740498 6743603 HY04AAS1_0798 Hydrogenobaculum sp. Y04AAS1 TraT complement resistance family protein YP_002121463.1 739728 D 380749 CDS YP_002121464.1 195953174 6743605 complement(740589..741293) 1 NC_011126.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: aae:aq_1303 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 741293 6743605 HY04AAS1_0799 Hydrogenobaculum sp. Y04AAS1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_002121464.1 740589 R 380749 CDS YP_002121465.1 195953175 6743606 complement(741290..742567) 1 NC_011126.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: aae:aq_816 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde-2,1-aminomutase 742567 6743606 HY04AAS1_0800 Hydrogenobaculum sp. Y04AAS1 glutamate-1-semialdehyde-2,1-aminomutase YP_002121465.1 741290 R 380749 CDS YP_002121466.1 195953176 6743607 complement(742592..743362) 1 NC_011126.1 hypothetical protein 743362 6743607 HY04AAS1_0801 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121466.1 742592 R 380749 CDS YP_002121467.1 195953177 6743608 743535..745301 1 NC_011126.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; KEGG: tko:TK1809 4-alpha-glucanotransferase, GH57 family; 4-alpha-glucanotransferase 745301 6743608 HY04AAS1_0802 Hydrogenobaculum sp. Y04AAS1 4-alpha-glucanotransferase YP_002121467.1 743535 D 380749 CDS YP_002121468.1 195953178 6743609 745295..746083 1 NC_011126.1 KEGG: aae:aq_1501 hypothetical protein; hypothetical protein 746083 6743609 HY04AAS1_0803 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121468.1 745295 D 380749 CDS YP_002121469.1 195953179 6743610 complement(746072..747040) 1 NC_011126.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sul:SYO3AOP1_0746 histidine kinase; histidine kinase 747040 6743610 HY04AAS1_0804 Hydrogenobaculum sp. Y04AAS1 histidine kinase YP_002121469.1 746072 R 380749 CDS YP_002121470.1 195953180 6743611 complement(747037..748350) 1 NC_011126.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 748350 hslU 6743611 hslU Hydrogenobaculum sp. Y04AAS1 ATP-dependent protease ATP-binding subunit HslU YP_002121470.1 747037 R 380749 CDS YP_002121471.1 195953181 6743612 complement(748340..748651) 1 NC_011126.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: aae:aq_1254 preprotein translocase YajC subunit; preprotein translocase subunit YajC 748651 6743612 HY04AAS1_0806 Hydrogenobaculum sp. Y04AAS1 preprotein translocase subunit YajC YP_002121471.1 748340 R 380749 CDS YP_002121472.1 195953182 6743613 complement(748664..749710) 1 NC_011126.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aae:aq_121 hypothetical protein; geranylgeranyl reductase 749710 6743613 HY04AAS1_0807 Hydrogenobaculum sp. Y04AAS1 geranylgeranyl reductase YP_002121472.1 748664 R 380749 CDS YP_002121473.1 195953183 6743614 complement(749694..749993) 1 NC_011126.1 PFAM: histone family protein DNA-binding protein; KEGG: aae:aq_2174 integration host factor beta subunit; histone family protein DNA-binding protein 749993 6743614 HY04AAS1_0808 Hydrogenobaculum sp. Y04AAS1 histone family protein DNA-binding protein YP_002121473.1 749694 R 380749 CDS YP_002121474.1 195953184 6743615 complement(750015..751820) 1 NC_011126.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 751820 6743615 HY04AAS1_0809 Hydrogenobaculum sp. Y04AAS1 glucosamine--fructose-6-phosphate aminotransferase YP_002121474.1 750015 R 380749 CDS YP_002121475.1 195953185 6743616 complement(751822..752916) 1 NC_011126.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_648 hypothetical protein; Radical SAM domain-containing protein 752916 6743616 HY04AAS1_0810 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121475.1 751822 R 380749 CDS YP_002121476.1 195953186 6743617 complement(752981..753757) 1 NC_011126.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: tpd:Teth39_2110 modification methylase, HemK family; cyclic nucleotide-binding protein 753757 6743617 HY04AAS1_0811 Hydrogenobaculum sp. Y04AAS1 cyclic nucleotide-binding protein YP_002121476.1 752981 R 380749 CDS YP_002121477.1 195953187 6743618 complement(753714..754016) 1 NC_011126.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: aae:aq_098 protein export membrane protein SecG; preprotein translocase subunit SecG 754016 6743618 HY04AAS1_0812 Hydrogenobaculum sp. Y04AAS1 preprotein translocase subunit SecG YP_002121477.1 753714 R 380749 CDS YP_002121478.1 195953188 6743619 complement(754043..754765) 1 NC_011126.1 catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase 754765 6743619 HY04AAS1_0813 Hydrogenobaculum sp. Y04AAS1 6-carboxyhexanoate--CoA ligase YP_002121478.1 754043 R 380749 CDS YP_002121479.1 195953189 6743620 complement(754768..756825) 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: cbk:CLL_A0061 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 756825 6743620 HY04AAS1_0814 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002121479.1 754768 R 380749 CDS YP_002121480.1 195953190 6743621 complement(756893..757546) 1 NC_011126.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 757546 6743621 HY04AAS1_0815 Hydrogenobaculum sp. Y04AAS1 translaldolase YP_002121480.1 756893 R 380749 CDS YP_002121481.1 195953191 6743622 757608..758882 1 NC_011126.1 KEGG: aae:aq_806 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 758882 6743622 HY04AAS1_0816 Hydrogenobaculum sp. Y04AAS1 dihydroorotase, multifunctional complex type YP_002121481.1 757608 D 380749 CDS YP_002121482.1 195953192 6743623 complement(758879..759496) 1 NC_011126.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: ecv:APECO1_2045 regulatory protein; phage repressor 759496 6743623 HY04AAS1_0817 Hydrogenobaculum sp. Y04AAS1 phage repressor YP_002121482.1 758879 R 380749 CDS YP_002121483.1 195953193 6743624 complement(759493..760320) 1 NC_011126.1 KEGG: aae:aq_1770 leucyl-tRNA synthetase beta subunit; tRNA synthetase valyl/leucyl anticodon-binding 760320 6743624 HY04AAS1_0818 Hydrogenobaculum sp. Y04AAS1 tRNA synthetase valyl/leucyl anticodon-binding YP_002121483.1 759493 R 380749 CDS YP_002121484.1 195953194 6743625 complement(760336..762717) 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator; diguanylate cyclase/phosphodiesterase 762717 6743625 HY04AAS1_0819 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase/phosphodiesterase YP_002121484.1 760336 R 380749 CDS YP_002121485.1 195953195 6743626 complement(762833..763072) 1 NC_011126.1 hypothetical protein 763072 6743626 HY04AAS1_0820 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121485.1 762833 R 380749 CDS YP_002121486.1 195953196 6743627 complement(763075..763371) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0611 hypothetical protein; hypothetical protein 763371 6743627 HY04AAS1_0821 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121486.1 763075 R 380749 CDS YP_002121487.1 195953197 6743628 complement(763368..764297) 1 NC_011126.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sul:SYO3AOP1_0159 cytochrome c oxidase mono-heme subunit/FixO; cytochrome C oxidase mono-heme subunit/FixO 764297 6743628 HY04AAS1_0822 Hydrogenobaculum sp. Y04AAS1 cytochrome C oxidase mono-heme subunit/FixO YP_002121487.1 763368 R 380749 CDS YP_002121488.1 195953198 6743629 complement(764311..765729) 1 NC_011126.1 PFAM: cytochrome c oxidase subunit I; KEGG: sul:SYO3AOP1_0160 cytochrome-c oxidase; cytochrome-c oxidase 765729 6743629 HY04AAS1_0823 Hydrogenobaculum sp. Y04AAS1 cytochrome-c oxidase YP_002121488.1 764311 R 380749 CDS YP_002121489.1 195953199 6743630 complement(765742..766632) 1 NC_011126.1 PFAM: cytochrome c class I; KEGG: sul:SYO3AOP1_0161 cytochrome c class I; cytochrome c class I 766632 6743630 HY04AAS1_0824 Hydrogenobaculum sp. Y04AAS1 cytochrome c class I YP_002121489.1 765742 R 380749 CDS YP_002121490.1 195953200 6743631 complement(766807..768600) 1 NC_011126.1 KEGG: aae:aq_1663 flagellar hook associated protein FlgL; hypothetical protein 768600 6743631 HY04AAS1_0825 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121490.1 766807 R 380749 CDS YP_002121491.1 195953201 6743632 complement(768605..771100) 1 NC_011126.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: aae:aq_1662 flagellar hook associated protein FlgK; hypothetical protein 771100 6743632 HY04AAS1_0826 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121491.1 768605 R 380749 CDS YP_002121492.1 195953202 6743633 complement(771102..771374) 1 NC_011126.1 hypothetical protein 771374 6743633 HY04AAS1_0827 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121492.1 771102 R 380749 CDS YP_002121493.1 195953203 6743634 complement(771371..772342) 1 NC_011126.1 PFAM: DNA polymerase III delta; KEGG: sul:SYO3AOP1_0179 DNA polymerase III delta subunit; DNA polymerase III subunit delta 772342 6743634 HY04AAS1_0828 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunit delta YP_002121493.1 771371 R 380749 CDS YP_002121494.1 195953204 6743635 complement(772335..773159) 1 NC_011126.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: aae:aq_445 acetyl-CoA carboxylase carboxyl transferase subunit beta; acetyl-CoA carboxylase, carboxyl transferase subunit beta 773159 6743635 HY04AAS1_0829 Hydrogenobaculum sp. Y04AAS1 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_002121494.1 772335 R 380749 CDS YP_002121495.1 195953205 6743636 complement(773161..774000) 1 NC_011126.1 KEGG: aae:aq_2132 pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase 774000 6743636 HY04AAS1_0830 Hydrogenobaculum sp. Y04AAS1 pantoate/beta-alanine ligase YP_002121495.1 773161 R 380749 CDS YP_002121496.1 195953206 6743637 complement(774013..775437) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1395 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 775437 6743637 HY04AAS1_0831 Hydrogenobaculum sp. Y04AAS1 undecaprenyl-phosphate galactose phosphotransferase YP_002121496.1 774013 R 380749 CDS YP_002121497.1 195953207 6743638 complement(775437..776951) 1 NC_011126.1 KEGG: aae:aq_291 magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 776951 6743638 HY04AAS1_0832 Hydrogenobaculum sp. Y04AAS1 Mg chelatase subunit ChlI YP_002121497.1 775437 R 380749 CDS YP_002121498.1 195953208 6743639 complement(776941..778290) 1 NC_011126.1 KEGG: aae:aq_589 mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 778290 6743639 HY04AAS1_0833 Hydrogenobaculum sp. Y04AAS1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002121498.1 776941 R 380749 CDS YP_002121499.1 195953209 6743640 complement(778300..779376) 1 NC_011126.1 PFAM: protein of unknown function DUF43; KEGG: aae:aq_1754 hypothetical protein; hypothetical protein 779376 6743640 HY04AAS1_0834 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121499.1 778300 R 380749 CDS YP_002121500.1 195953210 6743641 779708..781693 1 NC_011126.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 781693 6743641 HY04AAS1_0835 Hydrogenobaculum sp. Y04AAS1 excinuclease ABC subunit B YP_002121500.1 779708 D 380749 CDS YP_002121501.1 195953211 6743642 781700..782200 1 NC_011126.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: aae:aq_2171 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 782200 6743642 HY04AAS1_0836 Hydrogenobaculum sp. Y04AAS1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002121501.1 781700 D 380749 CDS YP_002121502.1 195953212 6743643 782261..783259 1 NC_011126.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sul:SYO3AOP1_0314 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 783259 6743643 HY04AAS1_0837 Hydrogenobaculum sp. Y04AAS1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_002121502.1 782261 D 380749 CDS YP_002121503.1 195953213 6743644 783311..784882 1 NC_011126.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sul:SYO3AOP1_0393 mammalian cell entry related domain protein; virulence factor Mce 784882 6743644 HY04AAS1_0838 Hydrogenobaculum sp. Y04AAS1 virulence factor Mce YP_002121503.1 783311 D 380749 CDS YP_002121504.1 195953214 6743645 complement(784879..786258) 1 NC_011126.1 KEGG: zmo:ZMO0352 hypothetical protein; hypothetical protein 786258 6743645 HY04AAS1_0839 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121504.1 784879 R 380749 CDS YP_002121505.1 195953215 6743651 complement(791427..794117) 1 NC_011126.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: aae:aq_1774 glutamate ammonia ligase adenylyl-transferase; (glutamate--ammonia-ligase) adenylyltransferase 794117 6743651 HY04AAS1_0840 Hydrogenobaculum sp. Y04AAS1 (glutamate--ammonia-ligase) adenylyltransferase YP_002121505.1 791427 R 380749 CDS YP_002121506.1 195953216 6743652 complement(794110..794505) 1 NC_011126.1 PFAM: thioesterase superfamily protein; KEGG: aae:aq_1494 hypothetical protein; thioesterase 794505 6743652 HY04AAS1_0841 Hydrogenobaculum sp. Y04AAS1 thioesterase YP_002121506.1 794110 R 380749 CDS YP_002121507.1 195953217 6743653 complement(794469..794927) 1 NC_011126.1 PFAM: ferric-uptake regulator; KEGG: aae:aq_1418 transcriptional regulator (FurR family); Fur family ferric uptake regulator 794927 6743653 HY04AAS1_0842 Hydrogenobaculum sp. Y04AAS1 Fur family ferric uptake regulator YP_002121507.1 794469 R 380749 CDS YP_002121508.1 195953218 6743654 794995..795630 1 NC_011126.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: aae:aq_202 HAM1 protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 795630 6743654 HY04AAS1_0843 Hydrogenobaculum sp. Y04AAS1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_002121508.1 794995 D 380749 CDS YP_002121509.1 195953219 6743655 795632..795811 1 NC_011126.1 hypothetical protein 795811 6743655 HY04AAS1_0844 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121509.1 795632 D 380749 CDS YP_002121510.1 195953220 6743656 795804..796742 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: acl:ACL_1204 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 796742 6743656 HY04AAS1_0845 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121510.1 795804 D 380749 CDS YP_002121511.1 195953221 6743657 796739..798019 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nis:NIS_0196 signal transduction response regulator; diguanylate cyclase/phosphodiesterase 798019 6743657 HY04AAS1_0846 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase/phosphodiesterase YP_002121511.1 796739 D 380749 CDS YP_002121512.1 195953222 6743658 798019..798639 1 NC_011126.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 798639 6743658 HY04AAS1_0847 Hydrogenobaculum sp. Y04AAS1 riboflavin synthase subunit alpha YP_002121512.1 798019 D 380749 CDS YP_002121513.1 195953223 6743659 798647..799261 1 NC_011126.1 PFAM: regulatory protein TetR; KEGG: sfu:Sfum_1401 transcriptional regulator, TetR family; TetR family transcriptional regulator 799261 6743659 HY04AAS1_0848 Hydrogenobaculum sp. Y04AAS1 TetR family transcriptional regulator YP_002121513.1 798647 D 380749 CDS YP_002121514.1 195953224 6743660 799258..800511 1 NC_011126.1 PFAM: outer membrane efflux protein; KEGG: sul:SYO3AOP1_1380 outer membrane efflux protein; outer membrane efflux protein 800511 6743660 HY04AAS1_0849 Hydrogenobaculum sp. Y04AAS1 outer membrane efflux protein YP_002121514.1 799258 D 380749 CDS YP_002121515.1 195953225 6743661 800498..801637 1 NC_011126.1 PFAM: secretion protein HlyD family protein; KEGG: sul:SYO3AOP1_1379 secretion protein HlyD family protein; hemolysin D 801637 6743661 HY04AAS1_0850 Hydrogenobaculum sp. Y04AAS1 hemolysin D YP_002121515.1 800498 D 380749 CDS YP_002121516.1 195953226 6743662 801685..802992 1 NC_011126.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 802992 6743662 HY04AAS1_0851 Hydrogenobaculum sp. Y04AAS1 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002121516.1 801685 D 380749 CDS YP_002121517.1 195953227 6743663 complement(802963..803790) 1 NC_011126.1 PFAM: CinA domain protein; KEGG: aae:aq_1996 competence/damage-inducible protein CinA C-terminal domain; CinA domain-containing protein 803790 6743663 HY04AAS1_0852 Hydrogenobaculum sp. Y04AAS1 CinA domain-containing protein YP_002121517.1 802963 R 380749 CDS YP_002121518.1 195953228 6743664 complement(803787..805523) 1 NC_011126.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: aae:aq_556 penicillin binding protein 2; peptidoglycan glycosyltransferase 805523 6743664 HY04AAS1_0853 Hydrogenobaculum sp. Y04AAS1 peptidoglycan glycosyltransferase YP_002121518.1 803787 R 380749 CDS YP_002121519.1 195953229 6743665 complement(805520..805762) 1 NC_011126.1 hypothetical protein 805762 6743665 HY04AAS1_0854 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121519.1 805520 R 380749 CDS YP_002121520.1 195953230 6743666 complement(805743..806633) 1 NC_011126.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aae:aq_1875 S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW 806633 6743666 HY04AAS1_0855 Hydrogenobaculum sp. Y04AAS1 S-adenosyl-methyltransferase MraW YP_002121520.1 805743 R 380749 CDS YP_002121521.1 195953231 6743667 complement(806626..807555) 1 NC_011126.1 PFAM: histone deacetylase superfamily; KEGG: aae:aq_2110 acetoin utilization protein; histone deacetylase 807555 6743667 HY04AAS1_0856 Hydrogenobaculum sp. Y04AAS1 histone deacetylase YP_002121521.1 806626 R 380749 CDS YP_002121522.1 195953232 6743668 complement(807552..808319) 1 NC_011126.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 808319 rph 6743668 rph Hydrogenobaculum sp. Y04AAS1 ribonuclease PH YP_002121522.1 807552 R 380749 CDS YP_002121523.1 195953233 6743669 complement(808328..808939) 1 NC_011126.1 KEGG: aae:aq_2138 biotin biosynthesis protein; biotin biosynthesis protein 808939 6743669 HY04AAS1_0858 Hydrogenobaculum sp. Y04AAS1 biotin biosynthesis protein YP_002121523.1 808328 R 380749 CDS YP_002121524.1 195953234 6743670 809112..809402 1 NC_011126.1 PFAM: chaperonin Cpn10; KEGG: aae:aq_2199 GroES; chaperonin Cpn10 809402 6743670 HY04AAS1_0859 Hydrogenobaculum sp. Y04AAS1 chaperonin Cpn10 YP_002121524.1 809112 D 380749 CDS YP_002121525.1 195953235 6743671 809435..811066 1 NC_011126.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 811066 groEL 6743671 groEL Hydrogenobaculum sp. Y04AAS1 chaperonin GroEL YP_002121525.1 809435 D 380749 CDS YP_002121526.1 195953236 6743672 complement(811074..812474) 1 NC_011126.1 PFAM: glycosyl transferase family 39; KEGG: aae:aq_1220 protein; glycosyl transferase family 39 812474 6743672 HY04AAS1_0861 Hydrogenobaculum sp. Y04AAS1 glycosyl transferase family 39 YP_002121526.1 811074 R 380749 CDS YP_002121527.1 195953237 6743673 complement(812452..813726) 1 NC_011126.1 KEGG: blo:BL1148 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 813726 6743673 HY04AAS1_0862 Hydrogenobaculum sp. Y04AAS1 deoxyguanosinetriphosphate triphosphohydrolase YP_002121527.1 812452 R 380749 CDS YP_002121528.1 195953238 6743674 813761..814384 1 NC_011126.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 814384 6743674 HY04AAS1_0863 Hydrogenobaculum sp. Y04AAS1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_002121528.1 813761 D 380749 CDS YP_002121529.1 195953239 6743675 814438..814791 1 NC_011126.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aae:aq_1857 hypothetical protein; iron-sulfur cluster assembly accessory protein 814791 6743675 HY04AAS1_0864 Hydrogenobaculum sp. Y04AAS1 iron-sulfur cluster assembly accessory protein YP_002121529.1 814438 D 380749 CDS YP_002121530.1 195953240 6743676 814932..815789 1 NC_011126.1 hypothetical protein 815789 6743676 HY04AAS1_0865 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121530.1 814932 D 380749 CDS YP_002121531.1 195953241 6743677 complement(815798..816706) 1 NC_011126.1 PFAM: protein of unknown function DUF185; KEGG: aae:aq_622 hypothetical protein; hypothetical protein 816706 6743677 HY04AAS1_0866 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121531.1 815798 R 380749 CDS YP_002121532.1 195953242 6743678 816723..817157 1 NC_011126.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_567 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 817157 6743678 HY04AAS1_0867 Hydrogenobaculum sp. Y04AAS1 ribosomal-protein-alanine acetyltransferase YP_002121532.1 816723 D 380749 CDS YP_002121533.1 195953243 6743679 complement(817171..817422) 1 NC_011126.1 KEGG: aae:aq_1570 protein; hypothetical protein 817422 6743679 HY04AAS1_0868 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121533.1 817171 R 380749 CDS YP_002121534.1 195953244 6743680 complement(817376..817807) 1 NC_011126.1 PFAM: flagellar protein FliS; KEGG: aae:aq_2002 flagellar protein FliS; flagellar protein FliS 817807 6743680 HY04AAS1_0869 Hydrogenobaculum sp. Y04AAS1 flagellar protein FliS YP_002121534.1 817376 R 380749 CDS YP_002121535.1 195953245 6743681 complement(817820..819205) 1 NC_011126.1 KEGG: aae:aq_2001 flagellar hook associated protein FliD; Flagellar capping protein-like 819205 6743681 HY04AAS1_0870 Hydrogenobaculum sp. Y04AAS1 Flagellar capping protein-like YP_002121535.1 817820 R 380749 CDS YP_002121536.1 195953246 6743682 complement(819209..819622) 1 NC_011126.1 PFAM: flagellar protein FlaG protein; KEGG: sul:SYO3AOP1_0993 flagellar protein FlaG protein; flagellar protein FlaG 819622 6743682 HY04AAS1_0871 Hydrogenobaculum sp. Y04AAS1 flagellar protein FlaG YP_002121536.1 819209 R 380749 CDS YP_002121537.1 195953247 6743683 complement(819667..820119) 1 NC_011126.1 PFAM: endodeoxyribonuclease RusA; KEGG: aae:aq_1953 crossover junction endodeoxyribonuclease rus; endodeoxyribonuclease RusA 820119 6743683 HY04AAS1_0872 Hydrogenobaculum sp. Y04AAS1 endodeoxyribonuclease RusA YP_002121537.1 819667 R 380749 CDS YP_002121538.1 195953248 6743684 820136..822403 1 NC_011126.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 822403 pheT 6743684 pheT Hydrogenobaculum sp. Y04AAS1 phenylalanyl-tRNA synthetase subunit beta YP_002121538.1 820136 D 380749 CDS YP_002121539.1 195953249 6743686 822622..823179 1 NC_011126.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: fnu:FN0902 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 823179 6743686 HY04AAS1_0874 Hydrogenobaculum sp. Y04AAS1 5-formyltetrahydrofolate cyclo-ligase YP_002121539.1 822622 D 380749 CDS YP_002121540.1 195953250 6743687 823161..824888 1 NC_011126.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 824888 6743687 HY04AAS1_0875 Hydrogenobaculum sp. Y04AAS1 phosphodiesterase YP_002121540.1 823161 D 380749 CDS YP_002121541.1 195953251 6743688 824946..826319 1 NC_011126.1 KEGG: sul:SYO3AOP1_1464 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 826319 6743688 HY04AAS1_0876 Hydrogenobaculum sp. Y04AAS1 oxygen-independent coproporphyrinogen III oxidase YP_002121541.1 824946 D 380749 CDS YP_002121542.1 195953252 6743689 826374..827027 1 NC_011126.1 TIGRFAM: ATP synthase F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; KEGG: aae:aq_179 ATP synthase F0 subunit a; ATP synthase F0 subunit A 827027 6743689 HY04AAS1_0877 Hydrogenobaculum sp. Y04AAS1 ATP synthase F0 subunit A YP_002121542.1 826374 D 380749 CDS YP_002121543.1 195953253 6743690 827029..827436 1 NC_011126.1 KEGG: aae:aq_178 protein; hypothetical protein 827436 6743690 HY04AAS1_0878 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121543.1 827029 D 380749 CDS YP_002121544.1 195953254 6743691 827447..827794 1 NC_011126.1 TIGRFAM: ATP synthase F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; KEGG: sul:SYO3AOP1_0972 ATP synthase F0 subunit C; ATP synthase F0 subunit C 827794 6743691 HY04AAS1_0879 Hydrogenobaculum sp. Y04AAS1 ATP synthase F0 subunit C YP_002121544.1 827447 D 380749 CDS YP_002121545.1 195953255 6743692 827996..828202 1 NC_011126.1 PFAM: protein of unknown function DUF37; KEGG: aae:aq_175a hypothetical protein; hypothetical protein 828202 6743692 HY04AAS1_0880 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121545.1 827996 D 380749 CDS YP_002121546.1 195953256 6743693 828202..829746 1 NC_011126.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: aae:aq_175 60kDa inner-membrane protein; hypothetical protein 829746 6743693 HY04AAS1_0881 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121546.1 828202 D 380749 CDS YP_002121547.1 195953257 6743694 829765..831075 1 NC_011126.1 KEGG: aae:aq_592 hypothetical protein; hypothetical protein 831075 6743694 HY04AAS1_0882 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121547.1 829765 D 380749 CDS YP_002121548.1 195953258 6743695 831093..832061 1 NC_011126.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate; 3-dehydroquinate synthase 832061 6743695 HY04AAS1_0883 Hydrogenobaculum sp. Y04AAS1 3-dehydroquinate synthase YP_002121548.1 831093 D 380749 CDS YP_002121549.1 195953259 6743696 832058..832717 1 NC_011126.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: aae:aq_968 ribulose-5-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 832717 6743696 HY04AAS1_0884 Hydrogenobaculum sp. Y04AAS1 Ribulose-phosphate 3-epimerase YP_002121549.1 832058 D 380749 CDS YP_002121550.1 195953260 6743697 832710..833807 1 NC_011126.1 PFAM: aminotransferase class I and II; KEGG: aae:aq_421 aminotransferase (AspC family); class I and II aminotransferase 833807 6743697 HY04AAS1_0885 Hydrogenobaculum sp. Y04AAS1 class I and II aminotransferase YP_002121550.1 832710 D 380749 CDS YP_002121551.1 195953261 6743698 833843..834685 1 NC_011126.1 TIGRFAM: spermidine synthase; PFAM: Spermine synthase; Methyltransferase type 12; KEGG: aae:aq_062 spermidine synthase; spermidine synthase 834685 6743698 HY04AAS1_0886 Hydrogenobaculum sp. Y04AAS1 spermidine synthase YP_002121551.1 833843 D 380749 CDS YP_002121552.1 195953262 6743699 834697..836217 1 NC_011126.1 hypothetical protein 836217 6743699 HY04AAS1_0887 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121552.1 834697 D 380749 CDS YP_002121553.1 195953263 6743700 836222..836899 1 NC_011126.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: aae:aq_282 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 836899 6743700 HY04AAS1_0888 Hydrogenobaculum sp. Y04AAS1 DNA-(apurinic or apyrimidinic site) lyase YP_002121553.1 836222 D 380749 CDS YP_002121554.1 195953264 6743701 complement(836832..838310) 1 NC_011126.1 PFAM: Na+/solute symporter; KEGG: tvo:TVN1300 Na+/panthothenate symporter permease; Na+/solute symporter 838310 6743701 HY04AAS1_0889 Hydrogenobaculum sp. Y04AAS1 Na+/solute symporter YP_002121554.1 836832 R 380749 CDS YP_002121555.1 195953265 6743702 complement(838303..838479) 1 NC_011126.1 KEGG: sto:STS092 hypothetical protein; hypothetical protein 838479 6743702 HY04AAS1_0890 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121555.1 838303 R 380749 CDS YP_002121556.1 195953266 6743703 838538..839818 1 NC_011126.1 PFAM: histidinol dehydrogenase; KEGG: aae:aq_782 histidinol dehydrogenase; histidinol dehydrogenase 839818 6743703 HY04AAS1_0891 Hydrogenobaculum sp. Y04AAS1 histidinol dehydrogenase YP_002121556.1 838538 D 380749 CDS YP_002121557.1 195953267 6743704 839815..840357 1 NC_011126.1 KEGG: aae:aq_780 protein; hypothetical protein 840357 6743704 HY04AAS1_0892 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121557.1 839815 D 380749 CDS YP_002121558.1 195953268 6743705 840354..841190 1 NC_011126.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: aae:aq_1898 methylenetetrahydrofolate dehydrogenase/ methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 841190 6743705 HY04AAS1_0893 Hydrogenobaculum sp. Y04AAS1 methenyltetrahydrofolate cyclohydrolase YP_002121558.1 840354 D 380749 CDS YP_002121559.1 195953269 6743706 841187..843289 1 NC_011126.1 KEGG: aae:aq_633 DNA ligase (NAD dependent); TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 843289 6743706 HY04AAS1_0894 Hydrogenobaculum sp. Y04AAS1 NAD-dependent DNA ligase YP_002121559.1 841187 D 380749 CDS YP_002121560.1 195953270 6743707 843301..843963 1 NC_011126.1 KEGG: tva:TVAG_139760 viral A-type inclusion protein, Pfam: Myosin_tail_1 Pox_A_type_inc TBPIP bZIP_Maf Filament ATG16 Rab5-bind Laminin_I DUF904 Microtub_assoc CDC37_N Syntaxin HalX Spectrin BRE1 Prefoldin_2 PROSITE: GLU_RICH; hypothetical protein 843963 6743707 HY04AAS1_0895 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121560.1 843301 D 380749 CDS YP_002121561.1 195953271 6743708 complement(843960..844451) 1 NC_011126.1 PFAM: Domain of unknown function DUF1791; KEGG: cpf:CPF_0093 hypothetical protein; hypothetical protein 844451 6743708 HY04AAS1_0896 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121561.1 843960 R 380749 CDS YP_002121562.1 195953272 6743709 complement(844460..845044) 1 NC_011126.1 KEGG: sto:ST2368 hypothetical protein; hypothetical protein 845044 6743709 HY04AAS1_0897 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121562.1 844460 R 380749 CDS YP_002121563.1 195953273 6743710 complement(845041..846330) 1 NC_011126.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pol:Bpro_3715 ferredoxin; hypothetical protein 846330 6743710 HY04AAS1_0898 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121563.1 845041 R 380749 CDS YP_002121564.1 195953274 6743711 complement(846414..846848) 1 NC_011126.1 PFAM: Rubrerythrin; KEGG: sto:ST2370 hypothetical rubrerythrin; rubrerythrin 846848 6743711 HY04AAS1_0899 Hydrogenobaculum sp. Y04AAS1 rubrerythrin YP_002121564.1 846414 R 380749 CDS YP_002121565.1 195953275 6743712 846960..847394 1 NC_011126.1 KEGG: bca:BCE_A0224 lumazine binding domain protein; hypothetical protein 847394 6743712 HY04AAS1_0900 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121565.1 846960 D 380749 CDS YP_002121566.1 195953276 6743713 847394..848182 1 NC_011126.1 KEGG: nis:NIS_1089 hypothetical protein; hypothetical protein 848182 6743713 HY04AAS1_0901 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121566.1 847394 D 380749 CDS YP_002121567.1 195953277 6743714 848187..848621 1 NC_011126.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aae:aq_418 general secretion pathway protein G; general secretion pathway protein G 848621 6743714 HY04AAS1_0902 Hydrogenobaculum sp. Y04AAS1 general secretion pathway protein G YP_002121567.1 848187 D 380749 CDS YP_002121568.1 195953278 6743715 848593..848877 1 NC_011126.1 KEGG: cbk:CLL_A3296 prokaryotic N-methylation motif domain protein; hypothetical protein 848877 6743715 HY04AAS1_0903 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121568.1 848593 D 380749 CDS YP_002121569.1 195953279 6743716 848874..849359 1 NC_011126.1 KEGG: aae:aq_2118 hypothetical protein; hypothetical protein 849359 6743716 HY04AAS1_0904 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121569.1 848874 D 380749 CDS YP_002121570.1 195953280 6743717 849365..850012 1 NC_011126.1 KEGG: ddi:DDB_0231216 IRE family protein kinase; hypothetical protein 850012 6743717 HY04AAS1_0905 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121570.1 849365 D 380749 CDS YP_002121571.1 195953281 6743718 complement(850009..851226) 1 NC_011126.1 PFAM: cell wall hydrolase/autolysin; KEGG: aae:aq_1681 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 851226 6743718 HY04AAS1_0906 Hydrogenobaculum sp. Y04AAS1 N-acetylmuramoyl-L-alanine amidase YP_002121571.1 850009 R 380749 CDS YP_002121572.1 195953282 6743719 complement(851177..852892) 1 NC_011126.1 KEGG: aae:aq_1682 hypothetical protein; hypothetical protein 852892 6743719 HY04AAS1_0907 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121572.1 851177 R 380749 CDS YP_002121573.1 195953283 6743720 852916..854622 1 NC_011126.1 PFAM: type II secretion system protein E; KEGG: ttj:TTHA0364 type IV pilus assembly protein PilF; type II secretion system protein E 854622 6743720 HY04AAS1_0908 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein E YP_002121573.1 852916 D 380749 CDS YP_002121574.1 195953284 6743721 854632..857673 1 NC_011126.1 KEGG: fnu:FN0992 ADP-heptose:LPS heptosyltransferase II; ADP-heptose:LPS heptosyltransferase-like protein 857673 6743721 HY04AAS1_0909 Hydrogenobaculum sp. Y04AAS1 ADP-heptose:LPS heptosyltransferase-like protein YP_002121574.1 854632 D 380749 CDS YP_002121575.1 195953285 6743722 857729..858784 1 NC_011126.1 KEGG: rno:502541 loricrin; loricrin 858784 6743722 HY04AAS1_0910 Hydrogenobaculum sp. Y04AAS1 loricrin YP_002121575.1 857729 D 380749 CDS YP_002121576.1 195953286 6743723 858851..859642 1 NC_011126.1 KEGG: mar:MAE_57710 hypothetical protein; hypothetical protein 859642 6743723 HY04AAS1_0911 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121576.1 858851 D 380749 CDS YP_002121577.1 195953287 6743724 859714..860652 1 NC_011126.1 PFAM: Polyprenyl synthetase; KEGG: aae:aq_895 octoprenyl-diphosphate synthase; Polyprenyl synthetase 860652 6743724 HY04AAS1_0912 Hydrogenobaculum sp. Y04AAS1 Polyprenyl synthetase YP_002121577.1 859714 D 380749 CDS YP_002121578.1 195953288 6743725 860652..861878 1 NC_011126.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aae:aq_101 hemolysin; hypothetical protein 861878 6743725 HY04AAS1_0913 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121578.1 860652 D 380749 CDS YP_002121579.1 195953289 6743726 861939..862133 1 NC_011126.1 KEGG: cph:Cpha266_2705 hypothetical protein; hypothetical protein 862133 6743726 HY04AAS1_0914 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121579.1 861939 D 380749 CDS YP_002121580.1 195953290 6743727 862357..863196 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0936 TtrB; 4Fe-4S ferredoxin 863196 6743727 HY04AAS1_0915 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin YP_002121580.1 862357 D 380749 CDS YP_002121581.1 195953291 6743728 863186..864370 1 NC_011126.1 PFAM: Polysulphide reductase NrfD; KEGG: wsu:WS0937 hypothetical protein; polysulfide reductase 864370 6743728 HY04AAS1_0916 Hydrogenobaculum sp. Y04AAS1 polysulfide reductase YP_002121581.1 863186 D 380749 CDS YP_002121582.1 195953292 6743729 864367..867435 1 NC_011126.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: wsu:WS0938 TtrA; molybdopterin oxidoreductase 867435 6743729 HY04AAS1_0917 Hydrogenobaculum sp. Y04AAS1 molybdopterin oxidoreductase YP_002121582.1 864367 D 380749 CDS YP_002121583.1 195953293 6743730 complement(867467..868171) 1 NC_011126.1 PFAM: polysaccharide deacetylase; KEGG: sul:SYO3AOP1_1196 polysaccharide deacetylase; polysaccharide deacetylase 868171 6743730 HY04AAS1_0918 Hydrogenobaculum sp. Y04AAS1 polysaccharide deacetylase YP_002121583.1 867467 R 380749 CDS YP_002121584.1 195953294 6743731 complement(868168..868908) 1 NC_011126.1 PFAM: protein of unknown function DUF81; KEGG: tpd:Teth39_0912 protein of unknown function DUF81; hypothetical protein 868908 6743731 HY04AAS1_0919 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121584.1 868168 R 380749 CDS YP_002121585.1 195953295 6743732 complement(868905..870764) 1 NC_011126.1 KEGG: tex:Teth514_1974 amino acid transporter-like protein; amino acid transporter 870764 6743732 HY04AAS1_0920 Hydrogenobaculum sp. Y04AAS1 amino acid transporter YP_002121585.1 868905 R 380749 CDS YP_002121586.1 195953296 6743733 complement(870776..870952) 1 NC_011126.1 hypothetical protein 870952 6743733 HY04AAS1_0921 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121586.1 870776 R 380749 CDS YP_002121587.1 195953297 6743734 complement(870949..871725) 1 NC_011126.1 KEGG: aae:aq_1625 hypothetical protein; hypothetical protein 871725 6743734 HY04AAS1_0922 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121587.1 870949 R 380749 CDS YP_002121588.1 195953298 6743735 complement(871727..871939) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0138 hypothetical protein; hypothetical protein 871939 6743735 HY04AAS1_0923 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121588.1 871727 R 380749 CDS YP_002121589.1 195953299 6743736 complement(872009..872884) 1 NC_011126.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: aae:aq_1622 succinyl-CoA synthetase alpha chain; succinyl-CoA synthetase subunit alpha 872884 6743736 HY04AAS1_0924 Hydrogenobaculum sp. Y04AAS1 succinyl-CoA synthetase subunit alpha YP_002121589.1 872009 R 380749 CDS YP_002121590.1 195953300 6743737 complement(872897..874045) 1 NC_011126.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 874045 sucC 6743737 sucC Hydrogenobaculum sp. Y04AAS1 succinyl-CoA synthetase subunit beta YP_002121590.1 872897 R 380749 CDS YP_002121591.1 195953301 6743738 complement(874243..874458) 1 NC_011126.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sul:SYO3AOP1_0368 cold-shock DNA-binding domain protein; cold-shock DNA-binding protein 874458 6743738 HY04AAS1_0926 Hydrogenobaculum sp. Y04AAS1 cold-shock DNA-binding protein YP_002121591.1 874243 R 380749 CDS YP_002121592.1 195953302 6743739 complement(874553..875404) 1 NC_011126.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: sul:SYO3AOP1_1511 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 875404 6743739 HY04AAS1_0927 Hydrogenobaculum sp. Y04AAS1 tRNA pseudouridine synthase B YP_002121592.1 874553 R 380749 CDS YP_002121593.1 195953303 6743740 complement(875405..876340) 1 NC_011126.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; Sigma-70 region 4 type 2; KEGG: aae:aq_1452 RNA polymerase sigma factor; RNA polymerase, sigma 70 family subunit 876340 6743740 HY04AAS1_0928 Hydrogenobaculum sp. Y04AAS1 RNA polymerase, sigma 70 family subunit YP_002121593.1 875405 R 380749 CDS YP_002121594.1 195953304 6743741 complement(876362..877783) 1 NC_011126.1 KEGG: aae:aq_1450 periplasmic serine protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 877783 6743741 HY04AAS1_0929 Hydrogenobaculum sp. Y04AAS1 protease Do YP_002121594.1 876362 R 380749 CDS YP_002121595.1 195953305 6743742 complement(877788..878399) 1 NC_011126.1 PFAM: Methyltransferase type 11; KEGG: aae:aq_2139 hypothetical protein; type 11 methyltransferase 878399 6743742 HY04AAS1_0930 Hydrogenobaculum sp. Y04AAS1 type 11 methyltransferase YP_002121595.1 877788 R 380749 CDS YP_002121596.1 195953306 6743743 complement(878392..879423) 1 NC_011126.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: aae:aq_1638 lipoate-protein ligase A; biotin/lipoate A/B protein ligase 879423 6743743 HY04AAS1_0931 Hydrogenobaculum sp. Y04AAS1 biotin/lipoate A/B protein ligase YP_002121596.1 878392 R 380749 CDS YP_002121597.1 195953307 6743744 complement(879420..879866) 1 NC_011126.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 879866 fabZ 6743744 fabZ Hydrogenobaculum sp. Y04AAS1 (3R)-hydroxymyristoyl-ACP dehydratase YP_002121597.1 879420 R 380749 CDS YP_002121598.1 195953308 6743745 879912..880700 1 NC_011126.1 PFAM: protein of unknown function DUF52; KEGG: aae:aq_890 hypothetical protein; hypothetical protein 880700 6743745 HY04AAS1_0933 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121598.1 879912 D 380749 CDS YP_002121599.1 195953309 6743746 880697..881176 1 NC_011126.1 KEGG: aae:aq_1484 hypothetical gluconokinase; glucokinase 881176 6743746 HY04AAS1_0934 Hydrogenobaculum sp. Y04AAS1 glucokinase YP_002121599.1 880697 D 380749 CDS YP_002121600.1 195953310 6743747 881361..881699 1 NC_011126.1 PFAM: nitrogen regulatory protein P-II; KEGG: aae:aq_109 nitrogen regulatory PII protein; nitrogen regulatory protein P-II 881699 6743747 HY04AAS1_0935 Hydrogenobaculum sp. Y04AAS1 nitrogen regulatory protein P-II YP_002121600.1 881361 D 380749 CDS YP_002121601.1 195953311 6743748 881696..882997 1 NC_011126.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mth:MTH663 ammonium transporter; ammonium transporter 882997 6743748 HY04AAS1_0936 Hydrogenobaculum sp. Y04AAS1 ammonium transporter YP_002121601.1 881696 D 380749 CDS YP_002121602.1 195953312 6743749 883019..884164 1 NC_011126.1 KEGG: met:M446_4547 hypothetical protein; hypothetical protein 884164 6743749 HY04AAS1_0937 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121602.1 883019 D 380749 CDS YP_002121603.1 195953313 6743750 884197..884328 1 NC_011126.1 KEGG: maq:Maqu_2792 diguanylate phosphodiesterase; diguanylate phosphodiesterase 884328 6743750 HY04AAS1_0938 Hydrogenobaculum sp. Y04AAS1 diguanylate phosphodiesterase YP_002121603.1 884197 D 380749 CDS YP_002121604.1 195953314 6743751 884469..885818 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 885818 6743751 HY04AAS1_0939 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121604.1 884469 D 380749 CDS YP_002121605.1 195953315 6743752 885833..886624 1 NC_011126.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: wsu:WS1811 molybdenum-pterin-binding protein; ModE family transcriptional regulator 886624 6743752 HY04AAS1_0940 Hydrogenobaculum sp. Y04AAS1 ModE family transcriptional regulator YP_002121605.1 885833 D 380749 CDS YP_002121606.1 195953316 6743753 886636..887370 1 NC_011126.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sul:SYO3AOP1_0252 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein 887370 6743753 HY04AAS1_0941 Hydrogenobaculum sp. Y04AAS1 molybdenum ABC transporter substrate-binding protein YP_002121606.1 886636 D 380749 CDS YP_002121607.1 195953317 6743754 887371..888027 1 NC_011126.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hpy:HP0474 molybdenum ABC transporter, permease protein (ModB); molybdate ABC transporter inner membrane protein 888027 6743754 HY04AAS1_0942 Hydrogenobaculum sp. Y04AAS1 molybdate ABC transporter inner membrane protein YP_002121607.1 887371 D 380749 CDS YP_002121608.1 195953318 6743755 888024..888653 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cjj:CJJ81176_0322 molybdenum ABC transporter, ATP-binding protein; ABC transporter 888653 6743755 HY04AAS1_0943 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002121608.1 888024 D 380749 CDS YP_002121609.1 195953319 6743756 888806..890215 1 NC_011126.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 890215 6743756 HY04AAS1_0944 Hydrogenobaculum sp. Y04AAS1 nitrogenase cofactor biosynthesis protein NifB YP_002121609.1 888806 D 380749 CDS YP_002121610.1 195953320 6743757 890219..890431 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mca:MCA0205 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin 890431 6743757 HY04AAS1_0945 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin YP_002121610.1 890219 D 380749 CDS YP_002121611.1 195953321 6743758 890428..890745 1 NC_011126.1 PFAM: nitrogen fixation protein NifW; KEGG: zmo:ZMO1836 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW 890745 6743758 HY04AAS1_0946 Hydrogenobaculum sp. Y04AAS1 nitrogen fixation protein NifW YP_002121611.1 890428 D 380749 CDS YP_002121612.1 195953322 6743759 890726..890974 1 NC_011126.1 PFAM: NifZ family protein; KEGG: hha:Hhal_0277 NifZ family protein; NifZ family protein 890974 6743759 HY04AAS1_0947 Hydrogenobaculum sp. Y04AAS1 NifZ family protein YP_002121612.1 890726 D 380749 CDS YP_002121613.1 195953323 6743760 890937..891164 1 NC_011126.1 hypothetical protein 891164 6743760 HY04AAS1_0948 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121613.1 890937 D 380749 CDS YP_002121614.1 195953324 6743761 complement(891215..892054) 1 NC_011126.1 TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: ckl:CKL_3642 predicted nicotinate-nucleotide diphosphorylase; modD protein 892054 6743761 HY04AAS1_0949 Hydrogenobaculum sp. Y04AAS1 modD protein YP_002121614.1 891215 R 380749 CDS YP_002121615.1 195953325 6743762 complement(892112..892807) 1 NC_011126.1 KEGG: hmo:HM1_1325 hypothetical protein; hypothetical protein 892807 6743762 HY04AAS1_0950 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121615.1 892112 R 380749 CDS YP_002121616.1 195953326 6743763 892983..894041 1 NC_011126.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: aae:aq_410 carbamoyl-phosphate synthase small chain; carbamoyl-phosphate synthase small subunit 894041 6743763 HY04AAS1_0951 Hydrogenobaculum sp. Y04AAS1 carbamoyl-phosphate synthase small subunit YP_002121616.1 892983 D 380749 CDS YP_002121617.1 195953327 6743764 894042..895187 1 NC_011126.1 PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1863 multidrug-efflux transporter; major facilitator superfamily protein 895187 6743764 HY04AAS1_0952 Hydrogenobaculum sp. Y04AAS1 major facilitator superfamily protein YP_002121617.1 894042 D 380749 CDS YP_002121618.1 195953328 6743765 complement(895188..895760) 1 NC_011126.1 KEGG: csa:Csal_2511 hypothetical protein; hypothetical protein 895760 6743765 HY04AAS1_0953 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121618.1 895188 R 380749 CDS YP_002121619.1 195953329 6743766 complement(895739..896305) 1 NC_011126.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 896305 6743766 HY04AAS1_0954 Hydrogenobaculum sp. Y04AAS1 peptidyl-tRNA hydrolase YP_002121619.1 895739 R 380749 CDS YP_002121620.1 195953330 6743767 complement(896305..896898) 1 NC_011126.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 896898 6743767 HY04AAS1_0955 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L25/general stress protein Ctc YP_002121620.1 896305 R 380749 CDS YP_002121621.1 195953331 6743768 896963..897493 1 NC_011126.1 PFAM: glucose inhibited division protein; KEGG: aae:aq_1582 glucose inhibited division protein B; glucose inhibited division protein 897493 6743768 HY04AAS1_0956 Hydrogenobaculum sp. Y04AAS1 glucose inhibited division protein YP_002121621.1 896963 D 380749 CDS YP_002121622.1 195953332 6743769 897513..899039 1 NC_011126.1 PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 899039 6743769 HY04AAS1_0957 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121622.1 897513 D 380749 CDS YP_002121623.1 195953333 6743770 complement(899140..899748) 1 NC_011126.1 PFAM: NLP/P60 protein; KEGG: sul:SYO3AOP1_0828 NLP/P60 protein; NLP/P60 protein 899748 6743770 HY04AAS1_0958 Hydrogenobaculum sp. Y04AAS1 NLP/P60 protein YP_002121623.1 899140 R 380749 CDS YP_002121624.1 195953334 6743771 complement(899759..900091) 1 NC_011126.1 KEGG: rpt:Rpal_4871 TonB-dependent receptor; TonB-dependent receptor 900091 6743771 HY04AAS1_0959 Hydrogenobaculum sp. Y04AAS1 TonB-dependent receptor YP_002121624.1 899759 R 380749 CDS YP_002121625.1 195953335 6743772 900156..901493 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 901493 6743772 HY04AAS1_0960 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121625.1 900156 D 380749 CDS YP_002121626.1 195953336 6743773 901544..901903 1 NC_011126.1 hypothetical protein 901903 6743773 HY04AAS1_0961 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121626.1 901544 D 380749 CDS YP_002121627.1 195953337 6743774 901936..902172 1 NC_011126.1 KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 902172 6743774 HY04AAS1_0962 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121627.1 901936 D 380749 CDS YP_002121628.1 195953338 6743775 complement(902270..903610) 1 NC_011126.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 903610 6743775 HY04AAS1_0963 Hydrogenobaculum sp. Y04AAS1 DNA repair protein RadA YP_002121628.1 902270 R 380749 CDS YP_002121629.1 195953339 6743776 complement(903610..904344) 1 NC_011126.1 PFAM: protein of unknown function DUF218; KEGG: sul:SYO3AOP1_1020 protein of unknown function DUF218; hypothetical protein 904344 6743776 HY04AAS1_0964 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121629.1 903610 R 380749 CDS YP_002121630.1 195953340 6743777 complement(904341..904763) 1 NC_011126.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aae:aq_1987 hypothetical protein; biopolymer transport protein ExbD/TolR 904763 6743777 HY04AAS1_0965 Hydrogenobaculum sp. Y04AAS1 biopolymer transport protein ExbD/TolR YP_002121630.1 904341 R 380749 CDS YP_002121631.1 195953341 6743778 complement(904765..905385) 1 NC_011126.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aae:aq_1988 TolQ homolog; MotA/TolQ/ExbB proton channel 905385 6743778 HY04AAS1_0966 Hydrogenobaculum sp. Y04AAS1 MotA/TolQ/ExbB proton channel YP_002121631.1 904765 R 380749 CDS YP_002121632.1 195953342 6743779 complement(905389..908061) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_1989 hypothetical protein; hypothetical protein 908061 6743779 HY04AAS1_0967 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121632.1 905389 R 380749 CDS YP_002121633.1 195953343 6743780 complement(908036..908674) 1 NC_011126.1 PFAM: Phosphoglycerate mutase; KEGG: aae:aq_1990 phosphoglycerate mutase; phosphoglycerate mutase 908674 6743780 HY04AAS1_0968 Hydrogenobaculum sp. Y04AAS1 phosphoglycerate mutase YP_002121633.1 908036 R 380749 CDS YP_002121634.1 195953344 6743781 complement(908662..909786) 1 NC_011126.1 PFAM: aminotransferase class V; KEGG: sul:SYO3AOP1_1504 aminotransferase class V; class V aminotransferase 909786 6743781 HY04AAS1_0969 Hydrogenobaculum sp. Y04AAS1 class V aminotransferase YP_002121634.1 908662 R 380749 CDS YP_002121635.1 195953345 6743782 complement(909783..910208) 1 NC_011126.1 PFAM: nucleoside diphosphate kinase; KEGG: aae:aq_1590 nucleoside diphosphate kinase; nucleoside-diphosphate kinase 910208 6743782 HY04AAS1_0970 Hydrogenobaculum sp. Y04AAS1 nucleoside-diphosphate kinase YP_002121635.1 909783 R 380749 CDS YP_002121636.1 195953346 6743783 complement(910299..910940) 1 NC_011126.1 PFAM: HhH-GPD family protein; KEGG: aae:aq_172 endonuclease III; HhH-GPD family protein 910940 6743783 HY04AAS1_0971 Hydrogenobaculum sp. Y04AAS1 HhH-GPD family protein YP_002121636.1 910299 R 380749 CDS YP_002121637.1 195953347 6743784 complement(910937..911200) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0793 FlhB domain protein; FlhB domain-containing protein 911200 6743784 HY04AAS1_0972 Hydrogenobaculum sp. Y04AAS1 FlhB domain-containing protein YP_002121637.1 910937 R 380749 CDS YP_002121638.1 195953348 6743785 complement(911202..912800) 1 NC_011126.1 KEGG: aae:aq_388 protein; hypothetical protein 912800 6743785 HY04AAS1_0973 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121638.1 911202 R 380749 CDS YP_002121639.1 195953349 6743786 complement(912790..913722) 1 NC_011126.1 KEGG: aae:aq_852 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 913722 6743786 HY04AAS1_0974 Hydrogenobaculum sp. Y04AAS1 4-hydroxythreonine-4-phosphate dehydrogenase YP_002121639.1 912790 R 380749 CDS YP_002121640.1 195953350 6743787 complement(913719..914393) 1 NC_011126.1 KEGG: aae:aq_2203 protein; hypothetical protein 914393 6743787 HY04AAS1_0975 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121640.1 913719 R 380749 CDS YP_002121641.1 195953351 6743788 complement(914394..915128) 1 NC_011126.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tdn:Tmden_1219 short chain dehydrogenase; short-chain dehydrogenase/reductase 915128 6743788 HY04AAS1_0976 Hydrogenobaculum sp. Y04AAS1 short-chain dehydrogenase/reductase YP_002121641.1 914394 R 380749 CDS YP_002121642.1 195953352 6743790 916534..917988 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aae:aq_206 nitrite reductase (NAD(P)H) large subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 917988 6743790 HY04AAS1_0978 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121642.1 916534 D 380749 CDS YP_002121643.1 195953353 6743791 918077..918262 1 NC_011126.1 PFAM: ribosomal protein L31; KEGG: aae:aq_873a ribosomal protein L31; 50S ribosomal protein L31 918262 6743791 HY04AAS1_0979 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L31 YP_002121643.1 918077 D 380749 CDS YP_002121644.1 195953354 6743792 918278..919348 1 NC_011126.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 919348 prfA 6743792 prfA Hydrogenobaculum sp. Y04AAS1 peptide chain release factor 1 YP_002121644.1 918278 D 380749 CDS YP_002121645.1 195953355 6743793 919345..919437 1 NC_011126.1 hypothetical protein 919437 6743793 HY04AAS1_0981 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121645.1 919345 D 380749 CDS YP_002121646.1 195953356 6743794 919434..920087 1 NC_011126.1 PFAM: protein of unknown function DUF202; KEGG: aae:aq_913 hypothetical protein; hypothetical protein 920087 6743794 HY04AAS1_0982 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121646.1 919434 D 380749 CDS YP_002121647.1 195953357 6743795 920084..921367 1 NC_011126.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 921367 6743795 HY04AAS1_0983 Hydrogenobaculum sp. Y04AAS1 3-phosphoshikimate 1-carboxyvinyltransferase YP_002121647.1 920084 D 380749 CDS YP_002121648.1 195953358 6743796 921448..922185 1 NC_011126.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aae:aq_1218 RNA polymerase sigma factor; RNA polymerase, sigma 28 subunit, FliA/WhiG 922185 6743796 HY04AAS1_0984 Hydrogenobaculum sp. Y04AAS1 RNA polymerase, sigma 28 subunit, FliA/WhiG YP_002121648.1 921448 D 380749 CDS YP_002121649.1 195953359 6743797 922182..923687 1 NC_011126.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sul:SYO3AOP1_1378 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 923687 6743797 HY04AAS1_0985 Hydrogenobaculum sp. Y04AAS1 EmrB/QacA subfamily drug resistance transporter YP_002121649.1 922182 D 380749 CDS YP_002121650.1 195953360 6743798 923684..923995 1 NC_011126.1 hypothetical protein 923995 6743798 HY04AAS1_0986 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121650.1 923684 D 380749 CDS YP_002121651.1 195953361 6743799 923992..924732 1 NC_011126.1 hypothetical protein 924732 6743799 HY04AAS1_0987 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121651.1 923992 D 380749 CDS YP_002121652.1 195953362 6743800 924729..925595 1 NC_011126.1 KEGG: aae:aq_1286 hypothetical protein; hypothetical protein 925595 6743800 HY04AAS1_0988 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121652.1 924729 D 380749 CDS YP_002121653.1 195953363 6743801 925644..926066 1 NC_011126.1 PFAM: CoA-binding domain protein; KEGG: aae:aq_1869 hypothetical protein; CoA-binding domain-containing protein 926066 6743801 HY04AAS1_0989 Hydrogenobaculum sp. Y04AAS1 CoA-binding domain-containing protein YP_002121653.1 925644 D 380749 CDS YP_002121654.1 195953364 6743802 926063..928897 1 NC_011126.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 928897 6743802 HY04AAS1_0990 Hydrogenobaculum sp. Y04AAS1 preprotein translocase subunit SecA YP_002121654.1 926063 D 380749 CDS YP_002121655.1 195953365 6743803 928894..930270 1 NC_011126.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: aae:aq_501 phosphomannomutase; Phosphomannomutase 930270 6743803 HY04AAS1_0991 Hydrogenobaculum sp. Y04AAS1 Phosphomannomutase YP_002121655.1 928894 D 380749 CDS YP_002121656.1 195953366 6743804 930279..930866 1 NC_011126.1 PFAM: protein of unknown function DUF88; KEGG: aae:aq_200 hypothetical protein; hypothetical protein 930866 6743804 HY04AAS1_0992 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121656.1 930279 D 380749 CDS YP_002121657.1 195953367 6743805 930930..931271 1 NC_011126.1 KEGG: ptr:460193 similar to TPRXL protein; TPRXL protein-like 931271 6743805 HY04AAS1_0993 Hydrogenobaculum sp. Y04AAS1 TPRXL protein-like YP_002121657.1 930930 D 380749 CDS YP_002121658.1 195953368 6743806 931336..931896 1 NC_011126.1 KEGG: aae:aq_880 hypothetical protein; hypothetical protein 931896 6743806 HY04AAS1_0994 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121658.1 931336 D 380749 CDS YP_002121659.1 195953369 6743807 931928..932305 1 NC_011126.1 KEGG: sul:SYO3AOP1_0959 hypothetical protein; hypothetical protein 932305 6743807 HY04AAS1_0995 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121659.1 931928 D 380749 CDS YP_002121660.1 195953370 6743808 932437..932805 1 NC_011126.1 KEGG: sul:SYO3AOP1_0958 peptidase C39 bacteriocin processing; peptidase C39 bacteriocin processing 932805 6743808 HY04AAS1_0996 Hydrogenobaculum sp. Y04AAS1 peptidase C39 bacteriocin processing YP_002121660.1 932437 D 380749 CDS YP_002121661.1 195953371 6743809 932830..934539 1 NC_011126.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 934539 lysS 6743809 lysS Hydrogenobaculum sp. Y04AAS1 lysyl-tRNA synthetase YP_002121661.1 932830 D 380749 CDS YP_002121662.1 195953372 6743810 934606..935601 1 NC_011126.1 KEGG: aae:aq_975 biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 935601 6743810 HY04AAS1_0998 Hydrogenobaculum sp. Y04AAS1 biotin synthase YP_002121662.1 934606 D 380749 CDS YP_002121663.1 195953373 6743811 935592..936035 1 NC_011126.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aae:aq_903 hypothetical protein; zinc-binding CMP/dCMP deaminase 936035 6743811 HY04AAS1_0999 Hydrogenobaculum sp. Y04AAS1 zinc-binding CMP/dCMP deaminase YP_002121663.1 935592 D 380749 CDS YP_002121664.1 195953374 6743812 936040..936441 1 NC_011126.1 PFAM: protein of unknown function UPF0047; KEGG: aae:aq_1965 hypothetical protein; hypothetical protein 936441 6743812 HY04AAS1_1000 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121664.1 936040 D 380749 CDS YP_002121665.1 195953375 6743813 936438..937754 1 NC_011126.1 KEGG: aae:aq_1964 hypothetical zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; zinc metalloprotease 937754 6743813 HY04AAS1_1001 Hydrogenobaculum sp. Y04AAS1 zinc metalloprotease YP_002121665.1 936438 D 380749 CDS YP_002121666.1 195953376 6743814 937772..938710 1 NC_011126.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 938710 6743814 HY04AAS1_1002 Hydrogenobaculum sp. Y04AAS1 ornithine carbamoyltransferase YP_002121666.1 937772 D 380749 CDS YP_002121667.1 195953377 6743815 938682..940379 1 NC_011126.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_1563 multidrug resistance protein; ABC transporter 940379 6743815 HY04AAS1_1003 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002121667.1 938682 D 380749 CDS YP_002121668.1 195953378 6743816 complement(940372..940872) 1 NC_011126.1 KEGG: aae:aq_408 hypothetical protein; hypothetical protein 940872 6743816 HY04AAS1_1004 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121668.1 940372 R 380749 CDS YP_002121669.1 195953379 6743817 complement(940869..941873) 1 NC_011126.1 KEGG: aae:aq_1879 N-acetyl-gamma-glutamylphosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 941873 6743817 HY04AAS1_1005 Hydrogenobaculum sp. Y04AAS1 N-acetyl-gamma-glutamyl-phosphate reductase YP_002121669.1 940869 R 380749 CDS YP_002121670.1 195953380 6743818 complement(941858..942298) 1 NC_011126.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 942298 rpsI 6743818 rpsI Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S9 YP_002121670.1 941858 R 380749 CDS YP_002121671.1 195953381 6743819 complement(942311..942745) 1 NC_011126.1 PFAM: ribosomal protein L13; KEGG: aae:aq_1877 50S ribosomal protein L13; 50S ribosomal protein L13 942745 6743819 HY04AAS1_1007 Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L13 YP_002121671.1 942311 R 380749 CDS YP_002121672.1 195953382 6743820 complement(942822..943853) 1 NC_011126.1 KEGG: aae:aq_1827 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 943853 6743820 HY04AAS1_1008 Hydrogenobaculum sp. Y04AAS1 alanine racemase YP_002121672.1 942822 R 380749 CDS YP_002121673.1 195953383 6743821 complement(943850..944155) 1 NC_011126.1 hypothetical protein 944155 6743821 HY04AAS1_1009 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121673.1 943850 R 380749 CDS YP_002121674.1 195953384 6743822 complement(944148..944933) 1 NC_011126.1 PFAM: protein of unknown function DUF1009; KEGG: aae:aq_1276 hypothetical protein; hypothetical protein 944933 6743822 HY04AAS1_1010 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121674.1 944148 R 380749 CDS YP_002121675.1 195953385 6743823 complement(944948..946270) 1 NC_011126.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE1017 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 946270 6743823 HY04AAS1_1011 Hydrogenobaculum sp. Y04AAS1 integral membrane sensor signal transduction histidine kinase YP_002121675.1 944948 R 380749 CDS YP_002121676.1 195953386 6743824 complement(946277..948841) 1 NC_011126.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 948841 infB 6743824 infB Hydrogenobaculum sp. Y04AAS1 translation initiation factor IF-2 YP_002121676.1 946277 R 380749 CDS YP_002121677.1 195953387 6743826 complement(948988..949164) 1 NC_011126.1 hypothetical protein 949164 6743826 HY04AAS1_1013 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121677.1 948988 R 380749 CDS YP_002121678.1 195953388 6743827 complement(949312..950820) 1 NC_011126.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 950820 6743827 HY04AAS1_1014 Hydrogenobaculum sp. Y04AAS1 F0F1 ATP synthase subunit alpha YP_002121678.1 949312 R 380749 CDS YP_002121679.1 195953389 6743828 complement(950927..951475) 1 NC_011126.1 TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: aae:aq_1588 ATP synthase F1 delta chain; ATP synthase F1 subunit delta 951475 6743828 HY04AAS1_1015 Hydrogenobaculum sp. Y04AAS1 ATP synthase F1 subunit delta YP_002121679.1 950927 R 380749 CDS YP_002121680.1 195953390 6743829 complement(951472..951954) 1 NC_011126.1 KEGG: aae:aq_1587 ATP synthase F0 subunit B; ATP synthase F0 subunit B 951954 6743829 HY04AAS1_1016 Hydrogenobaculum sp. Y04AAS1 ATP synthase F0 subunit B YP_002121680.1 951472 R 380749 CDS YP_002121681.1 195953391 6743830 complement(951958..952386) 1 NC_011126.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: aae:aq_1586 ATP synthase F0 subunit B; H+transporting two-sector ATPase B/B' subunit 952386 6743830 HY04AAS1_1017 Hydrogenobaculum sp. Y04AAS1 H+transporting two-sector ATPase B/B' subunit YP_002121681.1 951958 R 380749 CDS YP_002121682.1 195953392 6743831 952481..952957 1 NC_011126.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 952957 smpB 6743831 smpB Hydrogenobaculum sp. Y04AAS1 SsrA-binding protein YP_002121682.1 952481 D 380749 CDS YP_002121683.1 195953393 6743832 952957..955041 1 NC_011126.1 KEGG: aae:aq_2046 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 955041 6743832 HY04AAS1_1019 Hydrogenobaculum sp. Y04AAS1 ribonuclease R YP_002121683.1 952957 D 380749 CDS YP_002121684.1 195953394 6743834 complement(955129..955386) 1 NC_011126.1 hypothetical protein 955386 6743834 HY04AAS1_1020 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121684.1 955129 R 380749 CDS YP_002121685.1 195953395 6743835 complement(955401..956813) 1 NC_011126.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 956813 6743835 HY04AAS1_1021 Hydrogenobaculum sp. Y04AAS1 F0F1 ATP synthase subunit beta YP_002121685.1 955401 R 380749 CDS YP_002121686.1 195953396 6743837 complement(956953..957735) 1 NC_011126.1 KEGG: vfi:VF1884 hypothetical protein; hypothetical protein 957735 6743837 HY04AAS1_1022 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121686.1 956953 R 380749 CDS YP_002121687.1 195953397 6743838 957940..959046 1 NC_011126.1 PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: aae:aq_245 phosphoribosylaminoimidazole carboxylase ATPase subunit; Phosphoribosylaminoimidazole carboxylase 959046 6743838 HY04AAS1_1023 Hydrogenobaculum sp. Y04AAS1 Phosphoribosylaminoimidazole carboxylase YP_002121687.1 957940 D 380749 CDS YP_002121688.1 195953398 6743839 959059..959832 1 NC_011126.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 959832 6743839 HY04AAS1_1024 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylglucosamine acyltransferase YP_002121688.1 959059 D 380749 CDS YP_002121689.1 195953399 6743840 959855..960328 1 NC_011126.1 KEGG: sul:SYO3AOP1_0631 hypothetical protein; hypothetical protein 960328 6743840 HY04AAS1_1025 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121689.1 959855 D 380749 CDS YP_002121690.1 195953400 6743841 complement(960332..961273) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1151 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 961273 6743841 HY04AAS1_1026 Hydrogenobaculum sp. Y04AAS1 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_002121690.1 960332 R 380749 CDS YP_002121691.1 195953401 6743842 complement(961270..963597) 1 NC_011126.1 PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; KEGG: mse:Msed_0839 DNA topoisomerase, type IA, central domain protein; DNA topoisomerase type IA central domain-containing protein 963597 6743842 HY04AAS1_1027 Hydrogenobaculum sp. Y04AAS1 DNA topoisomerase type IA central domain-containing protein YP_002121691.1 961270 R 380749 CDS YP_002121692.1 195953402 6743843 complement(963604..964764) 1 NC_011126.1 KEGG: aae:aq_1873 protein; hypothetical protein 964764 6743843 HY04AAS1_1028 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121692.1 963604 R 380749 CDS YP_002121693.1 195953403 6743844 complement(964761..965354) 1 NC_011126.1 hypothetical protein 965354 6743844 HY04AAS1_1029 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121693.1 964761 R 380749 CDS YP_002121694.1 195953404 6743845 complement(965356..966684) 1 NC_011126.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: aae:aq_1871 peptide maturation; peptidase U62 modulator of DNA gyrase 966684 6743845 HY04AAS1_1030 Hydrogenobaculum sp. Y04AAS1 peptidase U62 modulator of DNA gyrase YP_002121694.1 965356 R 380749 CDS YP_002121695.1 195953405 6743846 966817..967092 1 NC_011126.1 KEGG: afu:AF1464 hypothetical protein; hypothetical protein 967092 6743846 HY04AAS1_1031 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121695.1 966817 D 380749 CDS YP_002121696.1 195953406 6743847 967239..967667 1 NC_011126.1 KEGG: aae:aq_615 protein; hypothetical protein 967667 6743847 HY04AAS1_1032 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121696.1 967239 D 380749 CDS YP_002121697.1 195953407 6743848 complement(967714..968427) 1 NC_011126.1 PFAM: Lytic transglycosylase catalytic; KEGG: aae:aq_1579 invasion protein IagB; Lytic transglycosylase 968427 6743848 HY04AAS1_1033 Hydrogenobaculum sp. Y04AAS1 Lytic transglycosylase YP_002121697.1 967714 R 380749 CDS YP_002121698.1 195953408 6743849 complement(968432..970078) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_854 hypothetical protein; hypothetical protein 970078 6743849 HY04AAS1_1034 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121698.1 968432 R 380749 CDS YP_002121699.1 195953409 6743850 complement(970080..970961) 1 NC_011126.1 PFAM: UspA domain protein; KEGG: aae:aq_855 hypothetical protein; UspA domain-containing protein 970961 6743850 HY04AAS1_1035 Hydrogenobaculum sp. Y04AAS1 UspA domain-containing protein YP_002121699.1 970080 R 380749 CDS YP_002121700.1 195953410 6743851 complement(970939..971748) 1 NC_011126.1 PFAM: inositol monophosphatase; KEGG: aae:aq_1983 myo-inositol-1(or 4)-monophosphatase; Inositol-phosphate phosphatase 971748 6743851 HY04AAS1_1036 Hydrogenobaculum sp. Y04AAS1 Inositol-phosphate phosphatase YP_002121700.1 970939 R 380749 CDS YP_002121701.1 195953411 6743852 complement(971755..972312) 1 NC_011126.1 PFAM: class II aldolase/adducin family protein; KEGG: aae:aq_1658 fuculose-1-phosphate aldolase; class II aldolase/adducin family protein 972312 6743852 HY04AAS1_1037 Hydrogenobaculum sp. Y04AAS1 class II aldolase/adducin family protein YP_002121701.1 971755 R 380749 CDS YP_002121702.1 195953412 6743853 complement(972300..973151) 1 NC_011126.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: aae:aq_052 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 973151 6743853 HY04AAS1_1038 Hydrogenobaculum sp. Y04AAS1 4-hydroxybenzoate polyprenyltransferase YP_002121702.1 972300 R 380749 CDS YP_002121703.1 195953413 6743854 complement(973117..973605) 1 NC_011126.1 PFAM: shikimate kinase; KEGG: aae:aq_2177 shikimate kinase; Shikimate kinase 973605 6743854 HY04AAS1_1039 Hydrogenobaculum sp. Y04AAS1 Shikimate kinase YP_002121703.1 973117 R 380749 CDS YP_002121704.1 195953414 6743855 complement(973636..973974) 1 NC_011126.1 KEGG: aae:aq_420 protein; hypothetical protein 973974 6743855 HY04AAS1_1040 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121704.1 973636 R 380749 CDS YP_002121705.1 195953415 6743856 complement(974042..974767) 1 NC_011126.1 PFAM: protein of unknown function DUF81; KEGG: aae:aq_127 hypothetical protein; hypothetical protein 974767 6743856 HY04AAS1_1041 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121705.1 974042 R 380749 CDS YP_002121706.1 195953416 6743857 complement(974791..975405) 1 NC_011126.1 PFAM: Sporulation domain protein; KEGG: cyt:cce_0608 hypothetical protein; Sporulation domain-containing protein 975405 6743857 HY04AAS1_1042 Hydrogenobaculum sp. Y04AAS1 Sporulation domain-containing protein YP_002121706.1 974791 R 380749 CDS YP_002121707.1 195953417 6743858 complement(975455..976477) 1 NC_011126.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 976477 pheS 6743858 pheS Hydrogenobaculum sp. Y04AAS1 phenylalanyl-tRNA synthetase subunit alpha YP_002121707.1 975455 R 380749 CDS YP_002121708.1 195953418 6743859 complement(976467..976817) 1 NC_011126.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 976817 rplT 6743859 rplT Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L20 YP_002121708.1 976467 R 380749 CDS YP_002121709.1 195953419 6743860 complement(976833..977474) 1 NC_011126.1 PFAM: ribonuclease HII/HIII; KEGG: sul:SYO3AOP1_0189 ribonuclease H; Ribonuclease H 977474 6743860 HY04AAS1_1045 Hydrogenobaculum sp. Y04AAS1 Ribonuclease H YP_002121709.1 976833 R 380749 CDS YP_002121710.1 195953420 6743861 complement(977417..977821) 1 NC_011126.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 977821 rplS 6743861 rplS Hydrogenobaculum sp. Y04AAS1 50S ribosomal protein L19 YP_002121710.1 977417 R 380749 CDS YP_002121711.1 195953421 6743862 complement(977869..979032) 1 NC_011126.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:PflO1_1664 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 979032 6743862 HY04AAS1_1047 Hydrogenobaculum sp. Y04AAS1 C4-dicarboxylate transporter/malic acid transport protein YP_002121711.1 977869 R 380749 CDS YP_002121712.1 195953422 6743863 979189..980049 1 NC_011126.1 KEGG: aae:aq_1739 LytB protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 980049 6743863 HY04AAS1_1048 Hydrogenobaculum sp. Y04AAS1 hydroxymethylbutenyl pyrophosphate reductase YP_002121712.1 979189 D 380749 CDS YP_002121713.1 195953423 6743864 980081..981013 1 NC_011126.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aae:aq_2043 cytochrome c biogenesis protein; cytochrome c-type biogenesis protein CcsB 981013 6743864 HY04AAS1_1049 Hydrogenobaculum sp. Y04AAS1 cytochrome c-type biogenesis protein CcsB YP_002121713.1 980081 D 380749 CDS YP_002121714.1 195953424 6743865 981023..981856 1 NC_011126.1 KEGG: aae:aq_869 quinolinate phosphoribosyl transferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 981856 6743865 HY04AAS1_1050 Hydrogenobaculum sp. Y04AAS1 nicotinate-nucleotide pyrophosphorylase YP_002121714.1 981023 D 380749 CDS YP_002121715.1 195953425 6743866 981959..982228 1 NC_011126.1 PFAM: histone family protein DNA-binding protein; KEGG: gme:Gmet_0355 histone-like DNA-binding protein; histone family protein DNA-binding protein 982228 6743866 HY04AAS1_1051 Hydrogenobaculum sp. Y04AAS1 histone family protein DNA-binding protein YP_002121715.1 981959 D 380749 CDS YP_002121716.1 195953426 6743867 982287..982739 1 NC_011126.1 KEGG: aae:aq_272 protein; hypothetical protein 982739 6743867 HY04AAS1_1052 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121716.1 982287 D 380749 CDS YP_002121717.1 195953427 6743868 982726..983484 1 NC_011126.1 PFAM: ribosomal RNA adenine methylase transferase; KEGG: aae:aq_1816 dimethyladenosine transferase; ribosomal RNA adenine methylase transferase 983484 6743868 HY04AAS1_1053 Hydrogenobaculum sp. Y04AAS1 ribosomal RNA adenine methylase transferase YP_002121717.1 982726 D 380749 CDS YP_002121718.1 195953428 6743869 complement(983427..983870) 1 NC_011126.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: aae:aq_1495 O-6-methylguanine-DNA-alkyltransferase; methylated-DNA/protein-cysteine methyltransferase 983870 6743869 HY04AAS1_1054 Hydrogenobaculum sp. Y04AAS1 methylated-DNA/protein-cysteine methyltransferase YP_002121718.1 983427 R 380749 CDS YP_002121719.1 195953429 6743870 complement(983969..985366) 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 985366 6743870 HY04AAS1_1055 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121719.1 983969 R 380749 CDS YP_002121720.1 195953430 6743871 complement(985463..987262) 1 NC_011126.1 TIGRFAM: leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase class I (M); KEGG: aae:aq_351 leucyl-tRNA synthetase alpha subunit; leucyl-tRNA synthetase 987262 6743871 HY04AAS1_1056 Hydrogenobaculum sp. Y04AAS1 leucyl-tRNA synthetase YP_002121720.1 985463 R 380749 CDS YP_002121721.1 195953431 6743872 complement(987264..987815) 1 NC_011126.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: sul:SYO3AOP1_1101 DJ-1 family protein; DJ-1 family protein 987815 6743872 HY04AAS1_1057 Hydrogenobaculum sp. Y04AAS1 DJ-1 family protein YP_002121721.1 987264 R 380749 CDS YP_002121722.1 195953432 6743873 complement(987815..988135) 1 NC_011126.1 hypothetical protein 988135 6743873 HY04AAS1_1058 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121722.1 987815 R 380749 CDS YP_002121723.1 195953433 6743874 complement(988146..988379) 1 NC_011126.1 KEGG: aae:aq_1192a ferredoxin; ferredoxin 988379 6743874 HY04AAS1_1059 Hydrogenobaculum sp. Y04AAS1 ferredoxin YP_002121723.1 988146 R 380749 CDS YP_002121724.1 195953434 6743875 988550..988954 1 NC_011126.1 hypothetical protein 988954 6743875 HY04AAS1_1060 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121724.1 988550 D 380749 CDS YP_002121725.1 195953435 6743876 988968..990851 1 NC_011126.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 990851 6743876 HY04AAS1_1061 Hydrogenobaculum sp. Y04AAS1 1-deoxy-D-xylulose-5-phosphate synthase YP_002121725.1 988968 D 380749 CDS YP_002121726.1 195953436 6743877 complement(990837..991454) 1 NC_011126.1 SMART: protein phosphatase 2C domain protein; KEGG: aae:aq_575 hypothetical protein; protein serine/threonine phosphatase 991454 6743877 HY04AAS1_1062 Hydrogenobaculum sp. Y04AAS1 protein serine/threonine phosphatase YP_002121726.1 990837 R 380749 CDS YP_002121727.1 195953437 6743878 complement(991451..992254) 1 NC_011126.1 PFAM: Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aae:aq_576 ser/thr protein kinase; serine/threonine protein kinase 992254 6743878 HY04AAS1_1063 Hydrogenobaculum sp. Y04AAS1 serine/threonine protein kinase YP_002121727.1 991451 R 380749 CDS YP_002121728.1 195953438 6743879 complement(992254..992997) 1 NC_011126.1 KEGG: aae:aq_749 pseudouridine synthase I; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 992997 6743879 HY04AAS1_1064 Hydrogenobaculum sp. Y04AAS1 tRNA pseudouridine synthase A YP_002121728.1 992254 R 380749 CDS YP_002121729.1 195953439 6743880 complement(992994..994673) 1 NC_011126.1 KEGG: mma:MM_3109 glycogen phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase 994673 6743880 HY04AAS1_1065 Hydrogenobaculum sp. Y04AAS1 alpha-glucan phosphorylase YP_002121729.1 992994 R 380749 CDS YP_002121730.1 195953440 6743881 complement(994679..995464) 1 NC_011126.1 KEGG: aae:aq_2093 thiol:disulfide interchange protein; thiol:disulfide interchange protein 995464 6743881 HY04AAS1_1066 Hydrogenobaculum sp. Y04AAS1 thiol:disulfide interchange protein YP_002121730.1 994679 R 380749 CDS YP_002121731.1 195953441 6743882 complement(995503..996453) 1 NC_011126.1 PFAM: glycosyl transferase family 9; KEGG: aae:aq_145 ADP-heptose:LPS heptosyltransferase; glycosyl transferase family 9 996453 6743882 HY04AAS1_1067 Hydrogenobaculum sp. Y04AAS1 glycosyl transferase family 9 YP_002121731.1 995503 R 380749 CDS YP_002121732.1 195953442 6743883 complement(996464..996892) 1 NC_011126.1 KEGG: aae:aq_142 protein; hypothetical protein 996892 6743883 HY04AAS1_1068 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121732.1 996464 R 380749 CDS YP_002121733.1 195953443 6743884 complement(996894..998291) 1 NC_011126.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_2064 glutamate synthase (NADPH) small chain; glutamate synthase (NADPH), homotetrameric 998291 6743884 HY04AAS1_1069 Hydrogenobaculum sp. Y04AAS1 glutamate synthase (NADPH), homotetrameric YP_002121733.1 996894 R 380749 CDS YP_002121734.1 195953444 6743885 complement(998295..999062) 1 NC_011126.1 KEGG: aae:aq_2098 hypothetical protein; 2-polyprenylphenol hydroxylase-like protein 999062 6743885 HY04AAS1_1070 Hydrogenobaculum sp. Y04AAS1 2-polyprenylphenol hydroxylase-like protein YP_002121734.1 998295 R 380749 CDS YP_002121735.1 195953445 6743886 complement(999055..1000053) 1 NC_011126.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_403 hypothetical protein; Radical SAM domain-containing protein 1000053 6743886 HY04AAS1_1071 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002121735.1 999055 R 380749 CDS YP_002121736.1 195953446 6743887 complement(1000064..1000411) 1 NC_011126.1 PFAM: protein of unknown function DUF1291; KEGG: sai:Saci_1075 hypothetical protein; hypothetical protein 1000411 6743887 HY04AAS1_1072 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121736.1 1000064 R 380749 CDS YP_002121737.1 195953447 6743888 complement(1000482..1000928) 1 NC_011126.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1000928 6743888 HY04AAS1_1073 Hydrogenobaculum sp. Y04AAS1 glycine cleavage system protein H YP_002121737.1 1000482 R 380749 CDS YP_002121738.1 195953448 6743889 complement(1000980..1001381) 1 NC_011126.1 PFAM: DsrE family protein; KEGG: aae:aq_401 hypothetical protein; DsrE family protein 1001381 6743889 HY04AAS1_1074 Hydrogenobaculum sp. Y04AAS1 DsrE family protein YP_002121738.1 1000980 R 380749 CDS YP_002121739.1 195953449 6743890 complement(1001378..1001638) 1 NC_011126.1 KEGG: mbu:Mbur_0102 hypothetical protein; hypothetical protein 1001638 6743890 HY04AAS1_1075 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121739.1 1001378 R 380749 CDS YP_002121740.1 195953450 6743891 complement(1001635..1002111) 1 NC_011126.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1002111 6743891 HY04AAS1_1076 Hydrogenobaculum sp. Y04AAS1 glycine cleavage system protein H YP_002121740.1 1001635 R 380749 CDS YP_002121741.1 195953451 6743892 complement(1002172..1003134) 1 NC_011126.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aae:aq_400 heterodisulfide reductase subunit B; CoB--CoM heterodisulfide reductase 1003134 6743892 HY04AAS1_1077 Hydrogenobaculum sp. Y04AAS1 CoB--CoM heterodisulfide reductase YP_002121741.1 1002172 R 380749 CDS YP_002121742.1 195953452 6743893 complement(1003147..1003908) 1 NC_011126.1 KEGG: aae:aq_398 heterodisulfide reductase subunit C; heterodisulfide reductase subunit C 1003908 6743893 HY04AAS1_1078 Hydrogenobaculum sp. Y04AAS1 heterodisulfide reductase subunit C YP_002121742.1 1003147 R 380749 CDS YP_002121743.1 195953453 6743894 complement(1003921..1004694) 1 NC_011126.1 KEGG: aae:aq_397 hypothetical protein; hypothetical protein 1004694 6743894 HY04AAS1_1079 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121743.1 1003921 R 380749 CDS YP_002121744.1 195953454 6743895 complement(1004694..1005752) 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_395 heterodisulfide reductase subunit A; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1005752 6743895 HY04AAS1_1080 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121744.1 1004694 R 380749 CDS YP_002121745.1 195953455 6743896 complement(1005773..1007089) 1 NC_011126.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sso:SSO1129 Heterodisulfite reductase, subunit B (HdrB-1); hypothetical protein 1007089 6743896 HY04AAS1_1081 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121745.1 1005773 R 380749 CDS YP_002121746.1 195953456 6743897 complement(1007140..1007862) 1 NC_011126.1 KEGG: aae:aq_391 hypothetical protein; hypothetical protein 1007862 6743897 HY04AAS1_1082 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121746.1 1007140 R 380749 CDS YP_002121747.1 195953457 6743898 complement(1007876..1008304) 1 NC_011126.1 KEGG: aae:aq_390 hypothetical protein; hypothetical protein 1008304 6743898 HY04AAS1_1083 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121747.1 1007876 R 380749 CDS YP_002121748.1 195953458 6743899 complement(1008434..1008967) 1 NC_011126.1 KEGG: aae:aq_389 hypothetical protein; hypothetical protein 1008967 6743899 HY04AAS1_1084 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121748.1 1008434 R 380749 CDS YP_002121749.1 195953459 6743900 complement(1008978..1009211) 1 NC_011126.1 PFAM: SirA family protein; KEGG: rma:Rmag_0225 SirA family protein; SirA family protein 1009211 6743900 HY04AAS1_1085 Hydrogenobaculum sp. Y04AAS1 SirA family protein YP_002121749.1 1008978 R 380749 CDS YP_002121750.1 195953460 6743901 complement(1009316..1009864) 1 NC_011126.1 PFAM: protein of unknown function DUF507; KEGG: aae:aq_1752 hypothetical protein; hypothetical protein 1009864 6743901 HY04AAS1_1086 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121750.1 1009316 R 380749 CDS YP_002121751.1 195953461 6743902 complement(1009876..1010286) 1 NC_011126.1 TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: aae:aq_673 ATP synthase F1 epsilon subunit; ATP synthase F1 subunit epsilon 1010286 6743902 HY04AAS1_1087 Hydrogenobaculum sp. Y04AAS1 ATP synthase F1 subunit epsilon YP_002121751.1 1009876 R 380749 CDS YP_002121752.1 195953462 6743903 1010362..1011558 1 NC_011126.1 KEGG: aae:aq_1882 DNA polymerase III beta chain; TIGRFAM: DNA polymerase III beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1011558 6743903 HY04AAS1_1088 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunit beta YP_002121752.1 1010362 D 380749 CDS YP_002121753.1 195953463 6743904 1011583..1012326 1 NC_011126.1 PFAM: conserved hypothetical protein; KEGG: aae:aq_1884 hypothetical protein; hypothetical protein 1012326 6743904 HY04AAS1_1089 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121753.1 1011583 D 380749 CDS YP_002121754.1 195953464 6743905 1012323..1013465 1 NC_011126.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: aae:aq_1886 ATP-dependent dsDNA exonuclease; nuclease SbcCD, D subunit 1013465 6743905 HY04AAS1_1090 Hydrogenobaculum sp. Y04AAS1 nuclease SbcCD, D subunit YP_002121754.1 1012323 D 380749 CDS YP_002121755.1 195953465 6743906 1013533..1014381 1 NC_011126.1 PFAM: band 7 protein; KEGG: dra:DR_2143 hypothetical protein; hypothetical protein 1014381 6743906 HY04AAS1_1091 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121755.1 1013533 D 380749 CDS YP_002121756.1 195953466 6743907 1014378..1014851 1 NC_011126.1 PFAM: protein of unknown function DUF107; KEGG: abc:ACICU_03009 membrane protein; hypothetical protein 1014851 6743907 HY04AAS1_1092 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121756.1 1014378 D 380749 CDS YP_002121757.1 195953467 6743908 1015120..1015833 1 NC_011126.1 PFAM: dienelactone hydrolase; KEGG: rba:RB5825 probable dienelactone hydrolase; dienelactone hydrolase 1015833 6743908 HY04AAS1_1093 Hydrogenobaculum sp. Y04AAS1 dienelactone hydrolase YP_002121757.1 1015120 D 380749 CDS YP_002121758.1 195953468 6743909 1015830..1016171 1 NC_011126.1 PFAM: protein of unknown function DUF488; KEGG: sso:SSO1867 hypothetical protein; hypothetical protein 1016171 6743909 HY04AAS1_1094 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121758.1 1015830 D 380749 CDS YP_002121759.1 195953469 6743910 1016147..1016605 1 NC_011126.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1359 hypothetical protein; GCN5-like N-acetyltransferase 1016605 6743910 HY04AAS1_1095 Hydrogenobaculum sp. Y04AAS1 GCN5-like N-acetyltransferase YP_002121759.1 1016147 D 380749 CDS YP_002121760.1 195953470 6743911 1016627..1017040 1 NC_011126.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: aae:aq_635 hypothetical protein; protein tyrosine phosphatase 1017040 6743911 HY04AAS1_1096 Hydrogenobaculum sp. Y04AAS1 protein tyrosine phosphatase YP_002121760.1 1016627 D 380749 CDS YP_002121761.1 195953471 6743912 1017021..1018070 1 NC_011126.1 PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1197 glycosyl transferase group 1; group 1 glycosyl transferase 1018070 6743912 HY04AAS1_1097 Hydrogenobaculum sp. Y04AAS1 group 1 glycosyl transferase YP_002121761.1 1017021 D 380749 CDS YP_002121762.1 195953472 6743913 1018078..1019403 1 NC_011126.1 KEGG: pfh:PFHG_04642 conserved hypothetical protein; hypothetical protein 1019403 6743913 HY04AAS1_1098 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121762.1 1018078 D 380749 CDS YP_002121763.1 195953473 6743914 1019476..1019778 1 NC_011126.1 PFAM: protein of unknown function DUF77; KEGG: aae:aq_2067 hypothetical protein; hypothetical protein 1019778 6743914 HY04AAS1_1099 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121763.1 1019476 D 380749 CDS YP_002121764.1 195953474 6743915 complement(1019779..1020120) 1 NC_011126.1 KEGG: aae:aq_853 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 1020120 6743915 HY04AAS1_1100 Hydrogenobaculum sp. Y04AAS1 6-pyruvoyl tetrahydrobiopterin synthase YP_002121764.1 1019779 R 380749 CDS YP_002121765.1 195953475 6743916 complement(1020120..1020356) 1 NC_011126.1 hypothetical protein 1020356 6743916 HY04AAS1_1101 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121765.1 1020120 R 380749 CDS YP_002121766.1 195953476 6743917 complement(1020367..1021260) 1 NC_011126.1 PFAM: YicC domain protein; KEGG: sul:SYO3AOP1_1469 domain of unknown function DUF1732; YicC domain-containing protein 1021260 6743917 HY04AAS1_1102 Hydrogenobaculum sp. Y04AAS1 YicC domain-containing protein YP_002121766.1 1020367 R 380749 CDS YP_002121767.1 195953477 6743918 complement(1021245..1022606) 1 NC_011126.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1022606 6743918 HY04AAS1_1103 Hydrogenobaculum sp. Y04AAS1 thiamine biosynthesis protein ThiC YP_002121767.1 1021245 R 380749 CDS YP_002121768.1 195953478 6743920 complement(1022871..1023182) 1 NC_011126.1 KEGG: nis:NIS_0600 hypothetical protein; hypothetical protein 1023182 6743920 HY04AAS1_1104 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121768.1 1022871 R 380749 CDS YP_002121769.1 195953479 6743921 complement(1023151..1023387) 1 NC_011126.1 hypothetical protein 1023387 6743921 HY04AAS1_1105 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121769.1 1023151 R 380749 CDS YP_002121770.1 195953480 6743922 complement(1023510..1024625) 1 NC_011126.1 PFAM: cell cycle protein; KEGG: aae:aq_025 rod shape determining protein RodA; cell cycle protein 1024625 6743922 HY04AAS1_1106 Hydrogenobaculum sp. Y04AAS1 cell cycle protein YP_002121770.1 1023510 R 380749 CDS YP_002121771.1 195953481 6743923 complement(1024612..1025322) 1 NC_011126.1 PFAM: phosphatidate cytidylyltransferase; KEGG: aae:aq_1249 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1025322 6743923 HY04AAS1_1107 Hydrogenobaculum sp. Y04AAS1 phosphatidate cytidylyltransferase YP_002121771.1 1024612 R 380749 CDS YP_002121772.1 195953482 6743924 complement(1025319..1026137) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sul:SYO3AOP1_0641 tol-pal system protein YbgF; hypothetical protein 1026137 6743924 HY04AAS1_1108 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121772.1 1025319 R 380749 CDS YP_002121773.1 195953483 6743925 1026188..1027654 1 NC_011126.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1027654 cysS 6743925 cysS Hydrogenobaculum sp. Y04AAS1 cysteinyl-tRNA synthetase YP_002121773.1 1026188 D 380749 CDS YP_002121774.1 195953484 6743926 1027654..1028454 1 NC_011126.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aae:aq_270 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1028454 6743926 HY04AAS1_1110 Hydrogenobaculum sp. Y04AAS1 prolipoprotein diacylglyceryl transferase YP_002121774.1 1027654 D 380749 CDS YP_002121775.1 195953485 6743927 1028476..1029699 1 NC_011126.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: sgr:SGR_4259 D-alanyl-D-alanine carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 1029699 6743927 HY04AAS1_1111 Hydrogenobaculum sp. Y04AAS1 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_002121775.1 1028476 D 380749 CDS YP_002121776.1 195953486 6743928 1029696..1030115 1 NC_011126.1 hypothetical protein 1030115 6743928 HY04AAS1_1112 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121776.1 1029696 D 380749 CDS YP_002121777.1 195953487 6743929 1030117..1030890 1 NC_011126.1 KEGG: ath:AT4G11980 ATNUDT14 (Arabidopsis thaliana Nudix hydrolase homolog 14); hydrolase; hypothetical protein 1030890 6743929 HY04AAS1_1113 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121777.1 1030117 D 380749 CDS YP_002121778.1 195953488 6743930 1030926..1031681 1 NC_011126.1 TIGRFAM: TonB family protein; KEGG: aae:aq_1982 protein; TonB family protein 1031681 6743930 HY04AAS1_1114 Hydrogenobaculum sp. Y04AAS1 TonB family protein YP_002121778.1 1030926 D 380749 CDS YP_002121779.1 195953489 6743931 1031685..1032287 1 NC_011126.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: aae:aq_1603 hypothetical protein; sigma 54 modulation protein/30S ribosomal protein S30EA 1032287 6743931 HY04AAS1_1115 Hydrogenobaculum sp. Y04AAS1 sigma 54 modulation protein/30S ribosomal protein S30EA YP_002121779.1 1031685 D 380749 CDS YP_002121780.1 195953490 6743932 1032290..1033792 1 NC_011126.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aae:aq_973 protein export membrane protein SecD; protein-export membrane protein SecD 1033792 6743932 HY04AAS1_1116 Hydrogenobaculum sp. Y04AAS1 protein-export membrane protein SecD YP_002121780.1 1032290 D 380749 CDS YP_002121781.1 195953491 6743933 1033789..1034625 1 NC_011126.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: aae:aq_1601 leader peptidase (prepilin peptidase) / N-methyltransferase; peptidase A24A domain-containing protein 1034625 6743933 HY04AAS1_1117 Hydrogenobaculum sp. Y04AAS1 peptidase A24A domain-containing protein YP_002121781.1 1033789 D 380749 CDS YP_002121782.1 195953492 6743934 1034616..1034894 1 NC_011126.1 KEGG: tcx:Tcr_1973 twin-arginine translocation protein TatB; twin-arginine translocation protein TatB 1034894 6743934 HY04AAS1_1118 Hydrogenobaculum sp. Y04AAS1 twin-arginine translocation protein TatB YP_002121782.1 1034616 D 380749 CDS YP_002121783.1 195953493 6743935 1034857..1035582 1 NC_011126.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: aae:aq_1267 sec-independant protein translocase; Sec-independent protein translocase, TatC subunit 1035582 6743935 HY04AAS1_1119 Hydrogenobaculum sp. Y04AAS1 Sec-independent protein translocase, TatC subunit YP_002121783.1 1034857 D 380749 CDS YP_002121784.1 195953494 6743936 1035653..1037317 1 NC_011126.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: aae:aq_2101 carbamoyl-phosphate synthase large chain; Carbamoyl-phosphate synthase L chain ATP-binding 1037317 6743936 HY04AAS1_1120 Hydrogenobaculum sp. Y04AAS1 Carbamoyl-phosphate synthase L chain ATP-binding YP_002121784.1 1035653 D 380749 CDS YP_002121785.1 195953495 6743937 1039776..1040720 1 NC_011126.1 KEGG: sul:SYO3AOP1_1000 hypothetical protein; hypothetical protein 1040720 6743937 HY04AAS1_1121 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121785.1 1039776 D 380749 CDS YP_002121786.1 195953496 6743938 complement(1040771..1040935) 1 NC_011126.1 hypothetical protein 1040935 6743938 HY04AAS1_1122 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121786.1 1040771 R 380749 CDS YP_002121787.1 195953497 6743939 1041346..1042014 1 NC_011126.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: cps:CPS_2411 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 1042014 6743939 HY04AAS1_1123 Hydrogenobaculum sp. Y04AAS1 Sel1 domain-containing protein repeat-containing protein YP_002121787.1 1041346 D 380749 CDS YP_002121788.1 195953498 6743940 1042030..1042146 1 NC_011126.1 hypothetical protein 1042146 6743940 HY04AAS1_1124 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121788.1 1042030 D 380749 CDS YP_002121789.1 195953499 6743941 1042163..1042639 1 NC_011126.1 KEGG: amr:AM1_2734 hypothetical protein; hypothetical protein 1042639 6743941 HY04AAS1_1125 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121789.1 1042163 D 380749 CDS YP_002121790.1 195953500 6743942 1042686..1043717 1 NC_011126.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: zmo:ZMO0137 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 1043717 6743942 HY04AAS1_1126 Hydrogenobaculum sp. Y04AAS1 Sel1 domain-containing protein repeat-containing protein YP_002121790.1 1042686 D 380749 CDS YP_002121791.1 195953501 6743943 1043830..1044417 1 NC_011126.1 hypothetical protein 1044417 6743943 HY04AAS1_1127 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121791.1 1043830 D 380749 CDS YP_002121792.1 195953502 6743944 complement(1044691..1045677) 1 NC_011126.1 KEGG: cch:Cag_0368 hypothetical protein; hypothetical protein 1045677 6743944 HY04AAS1_1128 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121792.1 1044691 R 380749 CDS YP_002121793.1 195953503 6743945 1045937..1046218 1 NC_011126.1 PFAM: ribosomal protein S20; KEGG: aae:aq_1767 30S ribosomal protein S20; 30S ribosomal protein S20 1046218 6743945 HY04AAS1_1129 Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S20 YP_002121793.1 1045937 D 380749 CDS YP_002121794.1 195953504 6743946 1046205..1046786 1 NC_011126.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: aae:aq_711 protein; hypothetical protein 1046786 6743946 HY04AAS1_1130 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121794.1 1046205 D 380749 CDS YP_002121795.1 195953505 6743947 1046783..1047484 1 NC_011126.1 KEGG: sul:SYO3AOP1_0856 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1047484 6743947 HY04AAS1_1131 Hydrogenobaculum sp. Y04AAS1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002121795.1 1046783 D 380749 CDS YP_002121796.1 195953506 6743948 1047832..1049421 1 NC_011126.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: aae:aq_866 NADH dehydrogenase I chain L; NADH dehydrogenase (quinone) 1049421 6743948 HY04AAS1_1132 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002121796.1 1047832 D 380749 CDS YP_002121797.1 195953507 6743949 complement(1049651..1049851) 1 NC_011126.1 KEGG: cvi:CV_3609 hypothetical protein; hypothetical protein 1049851 6743949 HY04AAS1_1133 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121797.1 1049651 R 380749 CDS YP_002121798.1 195953508 6743950 complement(1049939..1051183) 1 NC_011126.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1051183 6743950 HY04AAS1_1134 Hydrogenobaculum sp. Y04AAS1 adenylosuccinate synthetase YP_002121798.1 1049939 R 380749 CDS YP_002121799.1 195953509 6743952 complement(1051444..1051779) 1 NC_011126.1 PFAM: helix-turn-helix HxlR type; KEGG: npu:Npun_R3268 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1051779 6743952 HY04AAS1_1135 Hydrogenobaculum sp. Y04AAS1 HxlR family transcriptional regulator YP_002121799.1 1051444 R 380749 CDS YP_002121800.1 195953510 6743953 complement(1051776..1052825) 1 NC_011126.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Allinase-like; KEGG: sul:SYO3AOP1_1771 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1052825 6743953 HY04AAS1_1136 Hydrogenobaculum sp. Y04AAS1 histidinol-phosphate aminotransferase YP_002121800.1 1051776 R 380749 CDS YP_002121801.1 195953511 6743954 1052871..1053320 1 NC_011126.1 KEGG: aae:aq_1178 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 1053320 6743954 HY04AAS1_1137 Hydrogenobaculum sp. Y04AAS1 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_002121801.1 1052871 D 380749 CDS YP_002121802.1 195953512 6743955 1053605..1053976 1 NC_011126.1 hypothetical protein 1053976 6743955 HY04AAS1_1138 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121802.1 1053605 D 380749 CDS YP_002121803.1 195953513 6743956 complement(1054081..1054815) 1 NC_011126.1 KEGG: saz:Sama_3121 hypothetical protein; hypothetical protein 1054815 6743956 HY04AAS1_1139 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121803.1 1054081 R 380749 CDS YP_002121804.1 195953514 6743957 complement(1054818..1055498) 1 NC_011126.1 KEGG: dps:DP0107 similar to signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1055498 6743957 HY04AAS1_1140 Hydrogenobaculum sp. Y04AAS1 signal peptidase I YP_002121804.1 1054818 R 380749 CDS YP_002121805.1 195953515 6743958 1055566..1056783 1 NC_011126.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sul:SYO3AOP1_0582 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 1056783 6743958 HY04AAS1_1141 Hydrogenobaculum sp. Y04AAS1 molybdenum cofactor synthesis domain-containing protein YP_002121805.1 1055566 D 380749 CDS YP_002121806.1 195953516 6743959 1056806..1057012 1 NC_011126.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: pla:Plav_3289 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 1057012 6743959 HY04AAS1_1142 Hydrogenobaculum sp. Y04AAS1 thiamine biosynthesis protein ThiS YP_002121806.1 1056806 D 380749 CDS YP_002121807.1 195953517 6743960 1057013..1057804 1 NC_011126.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1057804 thiG 6743960 thiG Hydrogenobaculum sp. Y04AAS1 thiazole synthase YP_002121807.1 1057013 D 380749 CDS YP_002121808.1 195953518 6743961 1057801..1059126 1 NC_011126.1 KEGG: aae:aq_2015 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; protoporphyrinogen oxidase 1059126 6743961 HY04AAS1_1144 Hydrogenobaculum sp. Y04AAS1 protoporphyrinogen oxidase YP_002121808.1 1057801 D 380749 CDS YP_002121809.1 195953519 6743962 1059113..1059739 1 NC_011126.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aae:aq_1457 ubiquinone/menaquinone biosynthesis methlytransferase ubiE; type 11 methyltransferase 1059739 6743962 HY04AAS1_1145 Hydrogenobaculum sp. Y04AAS1 type 11 methyltransferase YP_002121809.1 1059113 D 380749 CDS YP_002121810.1 195953520 6743963 1059748..1060470 1 NC_011126.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: cbe:Cbei_2840 extradiol ring-cleavage dioxygenase, class III protein, subunit B; Extradiol ring-cleavage dioxygenase class III protein subunit B 1060470 6743963 HY04AAS1_1146 Hydrogenobaculum sp. Y04AAS1 Extradiol ring-cleavage dioxygenase class III protein subunit B YP_002121810.1 1059748 D 380749 CDS YP_002121811.1 195953521 6743964 1060503..1060817 1 NC_011126.1 PFAM: DNA polymerase subunit beta; KEGG: nis:NIS_1265 hypothetical protein; DNA polymerase subunit beta 1060817 6743964 HY04AAS1_1147 Hydrogenobaculum sp. Y04AAS1 DNA polymerase subunit beta YP_002121811.1 1060503 D 380749 CDS YP_002121812.1 195953522 6743965 1060855..1061781 1 NC_011126.1 KEGG: aae:aq_1273 lipoprotein; lipoprotein 1061781 6743965 HY04AAS1_1148 Hydrogenobaculum sp. Y04AAS1 lipoprotein YP_002121812.1 1060855 D 380749 CDS YP_002121813.1 195953523 6743966 1061774..1062106 1 NC_011126.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aae:aq_1272 hypothetical protein; iojap-like protein 1062106 6743966 HY04AAS1_1149 Hydrogenobaculum sp. Y04AAS1 iojap-like protein YP_002121813.1 1061774 D 380749 CDS YP_002121814.1 195953524 6743967 1062103..1063206 1 NC_011126.1 KEGG: aae:aq_1558 hypothetical protein; hypothetical protein 1063206 6743967 HY04AAS1_1150 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121814.1 1062103 D 380749 CDS YP_002121815.1 195953525 6743968 1063203..1063880 1 NC_011126.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lsp:Bsph_2783 response regulator ArlR; winged helix family two component transcriptional regulator 1063880 6743968 HY04AAS1_1151 Hydrogenobaculum sp. Y04AAS1 winged helix family two component transcriptional regulator YP_002121815.1 1063203 D 380749 CDS YP_002121816.1 195953526 6743969 1063897..1066170 1 NC_011126.1 KEGG: aae:aq_1242 DNA mismatch repair protein MutS; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein 1066170 6743969 HY04AAS1_1152 Hydrogenobaculum sp. Y04AAS1 MutS2 family protein YP_002121816.1 1063897 D 380749 CDS YP_002121817.1 195953527 6743970 1066172..1067230 1 NC_011126.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ana:alr1196 hypothetical protein; MscS Mechanosensitive ion channel 1067230 6743970 HY04AAS1_1153 Hydrogenobaculum sp. Y04AAS1 MscS Mechanosensitive ion channel YP_002121817.1 1066172 D 380749 CDS YP_002121818.1 195953528 6743971 1067243..1068181 1 NC_011126.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3788 transmembrane oxidoreductase protein; NAD-dependent epimerase/dehydratase 1068181 6743971 HY04AAS1_1154 Hydrogenobaculum sp. Y04AAS1 NAD-dependent epimerase/dehydratase YP_002121818.1 1067243 D 380749 CDS YP_002121819.1 195953529 6743972 1068181..1069452 1 NC_011126.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pnu:Pnuc_0325 hypothetical protein; hypothetical protein 1069452 6743972 HY04AAS1_1155 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121819.1 1068181 D 380749 CDS YP_002121820.1 195953530 6743973 complement(1069449..1070801) 1 NC_011126.1 KEGG: aae:aq_1236 hypothetical protein; hypothetical protein 1070801 6743973 HY04AAS1_1156 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121820.1 1069449 R 380749 CDS YP_002121821.1 195953531 6743974 complement(1070803..1072311) 1 NC_011126.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: aae:aq_1792 transcriptional regulator (NtrC family); NifA subfamily transcriptional regulator 1072311 6743974 HY04AAS1_1157 Hydrogenobaculum sp. Y04AAS1 NifA subfamily transcriptional regulator YP_002121821.1 1070803 R 380749 CDS YP_002121822.1 195953532 6743975 complement(1072304..1073239) 1 NC_011126.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sul:SYO3AOP1_1528 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 1073239 6743975 HY04AAS1_1158 Hydrogenobaculum sp. Y04AAS1 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_002121822.1 1072304 R 380749 CDS YP_002121823.1 195953533 6743976 1073339..1073971 1 NC_011126.1 PFAM: NLP/P60 protein; KEGG: gme:Gmet_1169 NLP/P60:peptidoglycan-binding LysM; NLP/P60 protein 1073971 6743976 HY04AAS1_1159 Hydrogenobaculum sp. Y04AAS1 NLP/P60 protein YP_002121823.1 1073339 D 380749 CDS YP_002121824.1 195953534 6743977 1074010..1075062 1 NC_011126.1 KEGG: ava:Ava_2455 ErfK/YbiS/YcfS/YnhG; hypothetical protein 1075062 6743977 HY04AAS1_1160 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121824.1 1074010 D 380749 CDS YP_002121825.1 195953535 6743978 1075163..1075633 1 NC_011126.1 KEGG: aae:aq_957 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1075633 6743978 HY04AAS1_1161 Hydrogenobaculum sp. Y04AAS1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002121825.1 1075163 D 380749 CDS YP_002121826.1 195953536 6743979 1075603..1076367 1 NC_011126.1 PFAM: Patatin; KEGG: aae:aq_1386 hypothetical protein; Patatin 1076367 6743979 HY04AAS1_1162 Hydrogenobaculum sp. Y04AAS1 Patatin YP_002121826.1 1075603 D 380749 CDS YP_002121827.1 195953537 6743980 1076480..1077073 1 NC_011126.1 PFAM: cytochrome c class I; KEGG: rfr:Rfer_2468 cytochrome c, class I; cytochrome c class I 1077073 6743980 HY04AAS1_1163 Hydrogenobaculum sp. Y04AAS1 cytochrome c class I YP_002121827.1 1076480 D 380749 CDS YP_002121828.1 195953538 6743981 1077140..1078534 1 NC_011126.1 KEGG: aae:aq_1450 periplasmic serine protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1078534 6743981 HY04AAS1_1164 Hydrogenobaculum sp. Y04AAS1 protease Do YP_002121828.1 1077140 D 380749 CDS YP_002121829.1 195953539 6743982 1078536..1079369 1 NC_011126.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1079369 dapF 6743982 dapF Hydrogenobaculum sp. Y04AAS1 diaminopimelate epimerase YP_002121829.1 1078536 D 380749 CDS YP_002121830.1 195953540 6743983 1079369..1079785 1 NC_011126.1 KEGG: aae:aq_194 protein; hypothetical protein 1079785 6743983 HY04AAS1_1166 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121830.1 1079369 D 380749 CDS YP_002121831.1 195953541 6743984 1079852..1081066 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aae:aq_1639 oxido/reductase iron sulfur protein; hypothetical protein 1081066 6743984 HY04AAS1_1167 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121831.1 1079852 D 380749 CDS YP_002121832.1 195953542 6743985 1081151..1081993 1 NC_011126.1 PFAM: protein of unknown function DUF191; KEGG: aae:aq_313 hypothetical protein; hypothetical protein 1081993 6743985 HY04AAS1_1168 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121832.1 1081151 D 380749 CDS YP_002121833.1 195953543 6743986 1082005..1082649 1 NC_011126.1 KEGG: aae:aq_1369 protein; hypothetical protein 1082649 6743986 HY04AAS1_1169 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121833.1 1082005 D 380749 CDS YP_002121834.1 195953544 6743987 1082646..1083095 1 NC_011126.1 PFAM: phosphatidylglycerophosphatase A; KEGG: aae:aq_314 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 1083095 6743987 HY04AAS1_1170 Hydrogenobaculum sp. Y04AAS1 phosphatidylglycerophosphatase A YP_002121834.1 1082646 D 380749 CDS YP_002121835.1 195953545 6743988 1083092..1085842 1 NC_011126.1 KEGG: sul:SYO3AOP1_0767 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1085842 6743988 HY04AAS1_1171 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase YP_002121835.1 1083092 D 380749 CDS YP_002121836.1 195953546 6743989 1085860..1086144 1 NC_011126.1 hypothetical protein 1086144 6743989 HY04AAS1_1172 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121836.1 1085860 D 380749 CDS YP_002121837.1 195953547 6743990 1086147..1086704 1 NC_011126.1 PFAM: thiamine monophosphate synthase; KEGG: aae:aq_1366 thiamine phosphate synthase; Thiamine-phosphate diphosphorylase 1086704 6743990 HY04AAS1_1173 Hydrogenobaculum sp. Y04AAS1 Thiamine-phosphate diphosphorylase YP_002121837.1 1086147 D 380749 CDS YP_002121838.1 195953548 6743991 1086803..1088488 1 NC_011126.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: sul:SYO3AOP1_0092 transposase; transposase 1088488 6743991 HY04AAS1_1174 Hydrogenobaculum sp. Y04AAS1 transposase YP_002121838.1 1086803 D 380749 CDS YP_002121839.1 195953549 6743992 1088500..1088706 1 NC_011126.1 KEGG: aae:aq_374 hypothetical protein; hypothetical protein 1088706 6743992 HY04AAS1_1175 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121839.1 1088500 D 380749 CDS YP_002121840.1 195953550 6743993 1088966..1089175 1 NC_011126.1 PFAM: protein of unknown function UPF0150; KEGG: ana:asl2437 hypothetical protein; hypothetical protein 1089175 6743993 HY04AAS1_1176 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121840.1 1088966 D 380749 CDS YP_002121841.1 195953551 6743995 complement(1089450..1090235) 1 NC_011126.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: aae:aq_1473 protein; PDZ/DHR/GLGF domain-containing protein 1090235 6743995 HY04AAS1_1178 Hydrogenobaculum sp. Y04AAS1 PDZ/DHR/GLGF domain-containing protein YP_002121841.1 1089450 R 380749 CDS YP_002121842.1 195953552 6743996 complement(1090232..1090660) 1 NC_011126.1 KEGG: aae:aq_1465 protein; hypothetical protein 1090660 6743996 HY04AAS1_1179 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121842.1 1090232 R 380749 CDS YP_002121843.1 195953553 6743997 complement(1090642..1091610) 1 NC_011126.1 KEGG: aae:aq_1843 hypothetical protein; hypothetical protein 1091610 6743997 HY04AAS1_1180 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121843.1 1090642 R 380749 CDS YP_002121844.1 195953554 6743998 complement(1091611..1091997) 1 NC_011126.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1091997 6743998 HY04AAS1_1181 Hydrogenobaculum sp. Y04AAS1 7-cyano-7-deazaguanine reductase YP_002121844.1 1091611 R 380749 CDS YP_002121845.1 195953555 6743999 1092060..1093805 1 NC_011126.1 PFAM: extracellular solute-binding protein family 5; KEGG: aae:aq_1441 peptide transport system substrate-binding protein; family 5 extracellular solute-binding protein 1093805 6743999 HY04AAS1_1182 Hydrogenobaculum sp. Y04AAS1 family 5 extracellular solute-binding protein YP_002121845.1 1092060 D 380749 CDS YP_002121846.1 195953556 6744000 1093905..1095452 1 NC_011126.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: aae:aq_2090 2-isopropylmalate synthase; 2-isopropylmalate synthase 1095452 6744000 HY04AAS1_1183 Hydrogenobaculum sp. Y04AAS1 2-isopropylmalate synthase YP_002121846.1 1093905 D 380749 CDS YP_002121847.1 195953557 6744001 complement(1095449..1096270) 1 NC_011126.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: aae:aq_901 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1096270 6744001 HY04AAS1_1184 Hydrogenobaculum sp. Y04AAS1 shikimate 5-dehydrogenase YP_002121847.1 1095449 R 380749 CDS YP_002121848.1 195953558 6744002 complement(1096267..1097346) 1 NC_011126.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1097346 mraY 6744002 mraY Hydrogenobaculum sp. Y04AAS1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002121848.1 1096267 R 380749 CDS YP_002121849.1 195953559 6744003 complement(1097347..1097910) 1 NC_011126.1 KEGG: aae:aq_054 protein; hypothetical protein 1097910 6744003 HY04AAS1_1186 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121849.1 1097347 R 380749 CDS YP_002121850.1 195953560 6744004 complement(1097907..1098497) 1 NC_011126.1 PFAM: protein of unknown function DUF205; KEGG: aae:aq_676 hypothetical protein; hypothetical protein 1098497 6744004 HY04AAS1_1187 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121850.1 1097907 R 380749 CDS YP_002121851.1 195953561 6744005 complement(1098499..1099089) 1 NC_011126.1 SMART: phospholipase D/Transphosphatidylase; KEGG: kcr:Kcr_0268 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase 1099089 6744005 HY04AAS1_1188 Hydrogenobaculum sp. Y04AAS1 phospholipase D/Transphosphatidylase YP_002121851.1 1098499 R 380749 CDS YP_002121852.1 195953562 6744006 complement(1099086..1100339) 1 NC_011126.1 KEGG: aae:aq_742 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylamine/glycine ligase 1100339 6744006 HY04AAS1_1189 Hydrogenobaculum sp. Y04AAS1 phosphoribosylamine/glycine ligase YP_002121852.1 1099086 R 380749 CDS YP_002121853.1 195953563 6744007 complement(1100336..1100596) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1058 hypothetical protein; hypothetical protein 1100596 6744007 HY04AAS1_1190 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121853.1 1100336 R 380749 CDS YP_002121854.1 195953564 6744008 complement(1100658..1101275) 1 NC_011126.1 PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_407 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1101275 6744008 HY04AAS1_1191 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002121854.1 1100658 R 380749 CDS YP_002121855.1 195953565 6744009 complement(1101335..1102000) 1 NC_011126.1 PFAM: type IV pilus assembly PilZ; KEGG: gme:Gmet_0191 hypothetical protein; type IV pilus assembly PilZ 1102000 6744009 HY04AAS1_1192 Hydrogenobaculum sp. Y04AAS1 type IV pilus assembly PilZ YP_002121855.1 1101335 R 380749 CDS YP_002121856.1 195953566 6744010 complement(1102018..1102686) 1 NC_011126.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 1102686 6744010 HY04AAS1_1193 Hydrogenobaculum sp. Y04AAS1 type IV pilus assembly PilZ YP_002121856.1 1102018 R 380749 CDS YP_002121857.1 195953567 6744011 complement(1102687..1105485) 1 NC_011126.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1105485 uvrA 6744011 uvrA Hydrogenobaculum sp. Y04AAS1 excinuclease ABC subunit A YP_002121857.1 1102687 R 380749 CDS YP_002121858.1 195953568 6744012 complement(1105463..1105993) 1 NC_011126.1 PFAM: protein of unknown function DUF88; KEGG: aae:aq_430 hypothetical protein; hypothetical protein 1105993 6744012 HY04AAS1_1195 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121858.1 1105463 R 380749 CDS YP_002121859.1 195953569 6744013 complement(1105990..1106580) 1 NC_011126.1 PFAM: GrpE protein; KEGG: aae:aq_433 heat shock protein GrpE; GrpE protein 1106580 6744013 HY04AAS1_1196 Hydrogenobaculum sp. Y04AAS1 GrpE protein YP_002121859.1 1105990 R 380749 CDS YP_002121860.1 195953570 6744014 complement(1106614..1107462) 1 NC_011126.1 KEGG: aae:aq_2080 proteinase IV; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 1107462 6744014 HY04AAS1_1197 Hydrogenobaculum sp. Y04AAS1 signal peptide peptidase SppA, 36K type YP_002121860.1 1106614 R 380749 CDS YP_002121861.1 195953571 6744015 complement(1107456..1108223) 1 NC_011126.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: aae:aq_1787 indole-3-glycerol phosphate synthase; Indole-3-glycerol-phosphate synthase 1108223 6744015 HY04AAS1_1198 Hydrogenobaculum sp. Y04AAS1 Indole-3-glycerol-phosphate synthase YP_002121861.1 1107456 R 380749 CDS YP_002121862.1 195953572 6744016 complement(1108223..1108867) 1 NC_011126.1 PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aae:aq_1997 hypothetical carboxymethylenebutenolidase; Carboxymethylenebutenolidase 1108867 6744016 HY04AAS1_1199 Hydrogenobaculum sp. Y04AAS1 Carboxymethylenebutenolidase YP_002121862.1 1108223 R 380749 CDS YP_002121863.1 195953573 6744017 complement(1108836..1109879) 1 NC_011126.1 KEGG: aae:aq_334 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1109879 6744017 HY04AAS1_1200 Hydrogenobaculum sp. Y04AAS1 uroporphyrinogen decarboxylase YP_002121863.1 1108836 R 380749 CDS YP_002121864.1 195953574 6744018 complement(1109879..1111099) 1 NC_011126.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sul:SYO3AOP1_1476 signal transduction protein; signal transduction protein 1111099 6744018 HY04AAS1_1201 Hydrogenobaculum sp. Y04AAS1 signal transduction protein YP_002121864.1 1109879 R 380749 CDS YP_002121865.1 195953575 6744019 complement(1111116..1111667) 1 NC_011126.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: aae:aq_1851 acetolactate synthase small subunit; acetolactate synthase, small subunit 1111667 6744019 HY04AAS1_1202 Hydrogenobaculum sp. Y04AAS1 acetolactate synthase, small subunit YP_002121865.1 1111116 R 380749 CDS YP_002121866.1 195953576 6744020 complement(1111678..1113432) 1 NC_011126.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: aae:aq_451 acetolactate synthase large subunit; acetolactate synthase, large subunit, biosynthetic type 1113432 6744020 HY04AAS1_1203 Hydrogenobaculum sp. Y04AAS1 acetolactate synthase, large subunit, biosynthetic type YP_002121866.1 1111678 R 380749 CDS YP_002121867.1 195953577 6744021 complement(1113485..1115059) 1 NC_011126.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: aae:aq_356 2-isopropylmalate synthase; alpha-isopropylmalate/homocitrate synthase family transferase 1115059 6744021 HY04AAS1_1204 Hydrogenobaculum sp. Y04AAS1 alpha-isopropylmalate/homocitrate synthase family transferase YP_002121867.1 1113485 R 380749 CDS YP_002121868.1 195953578 6744022 complement(1115104..1116159) 1 NC_011126.1 PFAM: creatinase; peptidase M24; KEGG: aae:aq_1535 Xaa-Pro dipeptidase; peptidase M24 1116159 6744022 HY04AAS1_1205 Hydrogenobaculum sp. Y04AAS1 peptidase M24 YP_002121868.1 1115104 R 380749 CDS YP_002121869.1 195953579 6744023 complement(1116156..1117343) 1 NC_011126.1 PFAM: regulatory protein LacI; sigma-54 DNA-binding domain protein; KEGG: aae:aq_599 RNA polymerase sigma factor; sigma-54 DNA-binding domain-containing protein 1117343 6744023 HY04AAS1_1206 Hydrogenobaculum sp. Y04AAS1 sigma-54 DNA-binding domain-containing protein YP_002121869.1 1116156 R 380749 CDS YP_002121870.1 195953580 6744024 complement(1117325..1121734) 1 NC_011126.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: aae:aq_1565 glutamate synthase (NADPH) large chain; glutamate synthase (ferredoxin) 1121734 6744024 HY04AAS1_1207 Hydrogenobaculum sp. Y04AAS1 glutamate synthase (ferredoxin) YP_002121870.1 1117325 R 380749 CDS YP_002121871.1 195953581 6744025 1121863..1122441 1 NC_011126.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; KEGG: aae:aq_651 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 1122441 6744025 HY04AAS1_1208 Hydrogenobaculum sp. Y04AAS1 Sua5/YciO/YrdC/YwlC family protein YP_002121871.1 1121863 D 380749 CDS YP_002121872.1 195953582 6744026 complement(1122448..1122825) 1 NC_011126.1 hypothetical protein 1122825 6744026 HY04AAS1_1209 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121872.1 1122448 R 380749 CDS YP_002121873.1 195953583 6744027 1122921..1123214 1 NC_011126.1 PFAM: protein of unknown function DUF156; KEGG: amt:Amet_0044 protein of unknown function DUF156; hypothetical protein 1123214 6744027 HY04AAS1_1210 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121873.1 1122921 D 380749 CDS YP_002121874.1 195953584 6744028 1123216..1123551 1 NC_011126.1 KEGG: gfo:GFO_1324 membrane protein containing heavy metal transport/detoxification domain; membrane protein containing heavy metal transport/detoxification domain 1123551 6744028 HY04AAS1_1211 Hydrogenobaculum sp. Y04AAS1 membrane protein containing heavy metal transport/detoxification domain YP_002121874.1 1123216 D 380749 CDS YP_002121875.1 195953585 6744029 1123565..1123801 1 NC_011126.1 PFAM: Heavy metal transport/detoxification protein; KEGG: ttj:TTHA1718 heavy metal binding protein; Heavy metal transport/detoxification protein 1123801 6744029 HY04AAS1_1212 Hydrogenobaculum sp. Y04AAS1 Heavy metal transport/detoxification protein YP_002121875.1 1123565 D 380749 CDS YP_002121876.1 195953586 6744030 1123794..1125188 1 NC_011126.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sag:SAG2023 mercuric reductase; mercuric reductase 1125188 6744030 HY04AAS1_1213 Hydrogenobaculum sp. Y04AAS1 mercuric reductase YP_002121876.1 1123794 D 380749 CDS YP_002121877.1 195953587 6744031 1125451..1128423 1 NC_011126.1 TIGRFAM: valyl-tRNA synthetase; KEGG: sul:SYO3AOP1_1334 valyl-tRNA synthetase; valyl-tRNA synthetase 1128423 6744031 HY04AAS1_1214 Hydrogenobaculum sp. Y04AAS1 valyl-tRNA synthetase YP_002121877.1 1125451 D 380749 CDS YP_002121878.1 195953588 6744032 1128420..1128926 1 NC_011126.1 PFAM: Peptidase M23; KEGG: aae:aq_652 lipoprotein; Peptidase M23 1128926 6744032 HY04AAS1_1215 Hydrogenobaculum sp. Y04AAS1 Peptidase M23 YP_002121878.1 1128420 D 380749 CDS YP_002121879.1 195953589 6744033 1128970..1129344 1 NC_011126.1 hypothetical protein 1129344 6744033 HY04AAS1_1216 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121879.1 1128970 D 380749 CDS YP_002121880.1 195953590 6744034 1129378..1129596 1 NC_011126.1 hypothetical protein 1129596 6744034 HY04AAS1_1217 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121880.1 1129378 D 380749 CDS YP_002121881.1 195953591 6744035 1129652..1130329 1 NC_011126.1 KEGG: mbr:MONBRDRAFT_13061 hypothetical protein PROSITE: SER_RICH THR_RICH; hypothetical protein 1130329 6744035 HY04AAS1_1218 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121881.1 1129652 D 380749 CDS YP_002121882.1 195953592 6744036 1130392..1131225 1 NC_011126.1 hypothetical protein 1131225 6744036 HY04AAS1_1219 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121882.1 1130392 D 380749 CDS YP_002121883.1 195953593 6744037 1131258..1131947 1 NC_011126.1 KEGG: gme:Gmet_0839 lipoprotein; hypothetical protein 1131947 6744037 HY04AAS1_1220 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121883.1 1131258 D 380749 CDS YP_002121884.1 195953594 6744038 1131944..1133266 1 NC_011126.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: dol:Dole_2900 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1133266 6744038 HY04AAS1_1221 Hydrogenobaculum sp. Y04AAS1 peptidase C14 caspase catalytic subunit p20 YP_002121884.1 1131944 D 380749 CDS YP_002121885.1 195953595 6744039 1133275..1134129 1 NC_011126.1 hypothetical protein 1134129 6744039 HY04AAS1_1222 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121885.1 1133275 D 380749 CDS YP_002121886.1 195953596 6744040 1134144..1134965 1 NC_011126.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: cbf:CLI_1224 tetratricopeptide repeat family protein; hypothetical protein 1134965 6744040 HY04AAS1_1223 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121886.1 1134144 D 380749 CDS YP_002121887.1 195953597 6744041 complement(1135004..1135669) 1 NC_011126.1 PFAM: protein of unknown function UPF0005; KEGG: cff:CFF8240_1784 hypothetical protein; hypothetical protein 1135669 6744041 HY04AAS1_1224 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121887.1 1135004 R 380749 CDS YP_002121888.1 195953598 6744042 1135766..1136866 1 NC_011126.1 Dimethylates a single guanine residue of a number of tRNAs using S-adenosyl-L-methionine as a methyl group donor; N(2),N(2)-dimethylguanosine tRNA methyltransferase 1136866 6744042 HY04AAS1_1225 Hydrogenobaculum sp. Y04AAS1 N(2),N(2)-dimethylguanosine tRNA methyltransferase YP_002121888.1 1135766 D 380749 CDS YP_002121889.1 195953599 6744043 1136857..1137870 1 NC_011126.1 PFAM: polysaccharide deacetylase; KEGG: sul:SYO3AOP1_1756 polysaccharide deacetylase; polysaccharide deacetylase 1137870 6744043 HY04AAS1_1226 Hydrogenobaculum sp. Y04AAS1 polysaccharide deacetylase YP_002121889.1 1136857 D 380749 CDS YP_002121890.1 195953600 6744044 1137956..1138915 1 NC_011126.1 PFAM: ribonucleotide reductase; KEGG: hsl:OE4345R ribonucleoside-diphosphate reductase beta subunit; Ribonucleoside-diphosphate reductase 1138915 6744044 HY04AAS1_1227 Hydrogenobaculum sp. Y04AAS1 Ribonucleoside-diphosphate reductase YP_002121890.1 1137956 D 380749 CDS YP_002121891.1 195953601 6744045 1138919..1139791 1 NC_011126.1 KEGG: aae:aq_1842 protein; hypothetical protein 1139791 6744045 HY04AAS1_1228 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121891.1 1138919 D 380749 CDS YP_002121892.1 195953602 6744046 1139801..1140865 1 NC_011126.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1140865 ispG 6744046 ispG Hydrogenobaculum sp. Y04AAS1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002121892.1 1139801 D 380749 CDS YP_002121893.1 195953603 6744047 1140868..1141077 1 NC_011126.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: sul:SYO3AOP1_1308 RNA chaperone Hfq; RNA chaperone Hfq 1141077 6744047 HY04AAS1_1230 Hydrogenobaculum sp. Y04AAS1 RNA chaperone Hfq YP_002121893.1 1140868 D 380749 CDS YP_002121894.1 195953604 6744048 1141074..1142186 1 NC_011126.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: aae:aq_1908 GTP-binding protein HflX; GTP-binding proten HflX 1142186 6744048 HY04AAS1_1231 Hydrogenobaculum sp. Y04AAS1 GTP-binding proten HflX YP_002121894.1 1141074 D 380749 CDS YP_002121895.1 195953605 6744049 1142179..1142994 1 NC_011126.1 KEGG: aae:aq_1909 protein; hypothetical protein 1142994 6744049 HY04AAS1_1232 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121895.1 1142179 D 380749 CDS YP_002121896.1 195953606 6744050 1143002..1144027 1 NC_011126.1 PFAM: aldo/keto reductase; KEGG: aae:aq_323 hypothetical protein; aldo/keto reductase 1144027 6744050 HY04AAS1_1233 Hydrogenobaculum sp. Y04AAS1 aldo/keto reductase YP_002121896.1 1143002 D 380749 CDS YP_002121897.1 195953607 6744051 1144020..1145099 1 NC_011126.1 PFAM: type II secretion system protein; KEGG: aae:aq_1285 fimbrial assembly protein PilC2; type II secretion system protein 1145099 6744051 HY04AAS1_1234 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein YP_002121897.1 1144020 D 380749 CDS YP_002121898.1 195953608 6744052 1145145..1145954 1 NC_011126.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aae:aq_270 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1145954 6744052 HY04AAS1_1235 Hydrogenobaculum sp. Y04AAS1 prolipoprotein diacylglyceryl transferase YP_002121898.1 1145145 D 380749 CDS YP_002121899.1 195953609 6744053 1145947..1146363 1 NC_011126.1 SMART: Mov34/MPN/PAD-1 family protein; KEGG: aae:aq_1691 hypothetical protein; Mov34/MPN/PAD-1 family protein 1146363 6744053 HY04AAS1_1236 Hydrogenobaculum sp. Y04AAS1 Mov34/MPN/PAD-1 family protein YP_002121899.1 1145947 D 380749 CDS YP_002121900.1 195953610 6744054 1146353..1147210 1 NC_011126.1 KEGG: aae:aq_263 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 1147210 6744054 HY04AAS1_1237 Hydrogenobaculum sp. Y04AAS1 porphobilinogen deaminase YP_002121900.1 1146353 D 380749 CDS YP_002121901.1 195953611 6744055 1147226..1148269 1 NC_011126.1 KEGG: aae:aq_993 hypothetical protein; hypothetical protein 1148269 6744055 HY04AAS1_1238 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121901.1 1147226 D 380749 CDS YP_002121902.1 195953612 6744056 complement(1148261..1149625) 1 NC_011126.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; KEGG: aae:aq_2060 Mg-dependent DNase; hydrolase, TatD family 1149625 6744056 HY04AAS1_1239 Hydrogenobaculum sp. Y04AAS1 hydrolase, TatD family YP_002121902.1 1148261 R 380749 CDS YP_002121903.1 195953613 6744057 complement(1149678..1151036) 1 NC_011126.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1151036 6744057 HY04AAS1_1240 Hydrogenobaculum sp. Y04AAS1 dihydrolipoamide dehydrogenase YP_002121903.1 1149678 R 380749 CDS YP_002121904.1 195953614 6744058 complement(1151076..1151420) 1 NC_011126.1 hypothetical protein 1151420 6744058 HY04AAS1_1241 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121904.1 1151076 R 380749 CDS YP_002121905.1 195953615 6744059 complement(1151437..1152585) 1 NC_011126.1 KEGG: mmi:MMAR_2272 PE-PGRS family protein; hypothetical protein 1152585 6744059 HY04AAS1_1242 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121905.1 1151437 R 380749 CDS YP_002121906.1 195953616 6744060 complement(1152606..1153382) 1 NC_011126.1 PFAM: Polyprenyl synthetase; KEGG: aae:aq_748 geranylgeranyl pyrophosphate synthase; Polyprenyl synthetase 1153382 6744060 HY04AAS1_1243 Hydrogenobaculum sp. Y04AAS1 Polyprenyl synthetase YP_002121906.1 1152606 R 380749 CDS YP_002121907.1 195953617 6744061 complement(1153379..1154311) 1 NC_011126.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1154311 6744061 HY04AAS1_1244 Hydrogenobaculum sp. Y04AAS1 dihydroorotate dehydrogenase 1B YP_002121907.1 1153379 R 380749 CDS YP_002121908.1 195953618 6744062 complement(1154304..1154426) 1 NC_011126.1 hypothetical protein 1154426 6744062 HY04AAS1_1245 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121908.1 1154304 R 380749 CDS YP_002121909.1 195953619 6744063 complement(1154499..1156196) 1 NC_011126.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1156196 uvrC 6744063 uvrC Hydrogenobaculum sp. Y04AAS1 excinuclease ABC subunit C YP_002121909.1 1154499 R 380749 CDS YP_002121910.1 195953620 6744064 complement(1156223..1157284) 1 NC_011126.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sul:SYO3AOP1_1478 histidine kinase; integral membrane sensor signal transduction histidine kinase 1157284 6744064 HY04AAS1_1247 Hydrogenobaculum sp. Y04AAS1 integral membrane sensor signal transduction histidine kinase YP_002121910.1 1156223 R 380749 CDS YP_002121911.1 195953621 6744065 complement(1157277..1157945) 1 NC_011126.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sul:SYO3AOP1_1480 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1157945 6744065 HY04AAS1_1248 Hydrogenobaculum sp. Y04AAS1 winged helix family two component transcriptional regulator YP_002121911.1 1157277 R 380749 CDS YP_002121912.1 195953622 6744066 complement(1157942..1158730) 1 NC_011126.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1158730 trpA 6744066 trpA Hydrogenobaculum sp. Y04AAS1 tryptophan synthase subunit alpha YP_002121912.1 1157942 R 380749 CDS YP_002121913.1 195953623 6744067 complement(1158727..1159275) 1 NC_011126.1 PFAM: ribosome recycling factor; KEGG: aae:aq_712 ribosome recycling factor; ribosome recycling factor 1159275 6744067 HY04AAS1_1250 Hydrogenobaculum sp. Y04AAS1 ribosome recycling factor YP_002121913.1 1158727 R 380749 CDS YP_002121914.1 195953624 6744068 1159358..1159621 1 NC_011126.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: aae:aq_108b host factor I; RNA chaperone Hfq 1159621 6744068 HY04AAS1_1251 Hydrogenobaculum sp. Y04AAS1 RNA chaperone Hfq YP_002121914.1 1159358 D 380749 CDS YP_002121915.1 195953625 6744069 1159662..1160363 1 NC_011126.1 KEGG: aae:aq_1248 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1160363 6744069 HY04AAS1_1252 Hydrogenobaculum sp. Y04AAS1 undecaprenyl diphosphate synthase YP_002121915.1 1159662 D 380749 CDS YP_002121916.1 195953626 6744071 1160470..1161747 1 NC_011126.1 PFAM: enolase; KEGG: aae:aq_484 enolase; Phosphopyruvate hydratase 1161747 6744071 HY04AAS1_1253 Hydrogenobaculum sp. Y04AAS1 Phosphopyruvate hydratase YP_002121916.1 1160470 D 380749 CDS YP_002121917.1 195953627 6744072 1161710..1162069 1 NC_011126.1 hypothetical protein 1162069 6744072 HY04AAS1_1254 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121917.1 1161710 D 380749 CDS YP_002121918.1 195953628 6744073 1162053..1162334 1 NC_011126.1 hypothetical protein 1162334 6744073 HY04AAS1_1255 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121918.1 1162053 D 380749 CDS YP_002121919.1 195953629 6744074 1162356..1164548 1 NC_011126.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: aae:aq_1836 phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase II 1164548 6744074 HY04AAS1_1256 Hydrogenobaculum sp. Y04AAS1 phosphoribosylformylglycinamidine synthase II YP_002121919.1 1162356 D 380749 CDS YP_002121920.1 195953630 6744075 1164518..1165000 1 NC_011126.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: aae:aq_1837 lipoprotein signal peptidase; lipoprotein signal peptidase 1165000 6744075 HY04AAS1_1257 Hydrogenobaculum sp. Y04AAS1 lipoprotein signal peptidase YP_002121920.1 1164518 D 380749 CDS YP_002121921.1 195953631 6744076 1165002..1165580 1 NC_011126.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: aae:aq_2076 phosphoribosyl anthranilate isomerase; Phosphoribosylanthranilate isomerase 1165580 6744076 HY04AAS1_1258 Hydrogenobaculum sp. Y04AAS1 Phosphoribosylanthranilate isomerase YP_002121921.1 1165002 D 380749 CDS YP_002121922.1 195953632 6744077 1165577..1166215 1 NC_011126.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: aae:aq_857 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1166215 6744077 HY04AAS1_1259 Hydrogenobaculum sp. Y04AAS1 phosphoribosylglycinamide formyltransferase YP_002121922.1 1165577 D 380749 CDS YP_002121923.1 195953633 6744078 1166271..1167344 1 NC_011126.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1167344 6744078 HY04AAS1_1260 Hydrogenobaculum sp. Y04AAS1 3-isopropylmalate dehydrogenase YP_002121923.1 1166271 D 380749 CDS YP_002121924.1 195953634 6744079 1167353..1168873 1 NC_011126.1 KEGG: aae:aq_243 protein; hypothetical protein 1168873 6744079 HY04AAS1_1261 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121924.1 1167353 D 380749 CDS YP_002121925.1 195953635 6744080 1168873..1169259 1 NC_011126.1 PFAM: Thioredoxin domain; KEGG: pmi:PMT9312_0244 thioredoxin-like protein TxlA; Thioredoxin domain 1169259 6744080 HY04AAS1_1262 Hydrogenobaculum sp. Y04AAS1 Thioredoxin domain YP_002121925.1 1168873 D 380749 CDS YP_002121926.1 195953636 6744081 complement(1169246..1171642) 1 NC_011126.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1171642 6744081 HY04AAS1_1263 Hydrogenobaculum sp. Y04AAS1 ATP-dependent DNA helicase RecG YP_002121926.1 1169246 R 380749 CDS YP_002121927.1 195953637 6744082 complement(1171639..1175136) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1462 hypothetical protein; hypothetical protein 1175136 6744082 HY04AAS1_1264 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121927.1 1171639 R 380749 CDS YP_002121928.1 195953638 6744083 complement(1175147..1175461) 1 NC_011126.1 PFAM: small multidrug resistance protein; KEGG: tle:Tlet_1278 small multidrug resistance protein; small multidrug resistance protein 1175461 6744083 HY04AAS1_1265 Hydrogenobaculum sp. Y04AAS1 small multidrug resistance protein YP_002121928.1 1175147 R 380749 CDS YP_002121929.1 195953639 6744084 complement(1175495..1176484) 1 NC_011126.1 PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: aae:aq_1888 succinyl-CoA synthetase alpha chain; CoA-binding domain-containing protein 1176484 6744084 HY04AAS1_1266 Hydrogenobaculum sp. Y04AAS1 CoA-binding domain-containing protein YP_002121929.1 1175495 R 380749 CDS YP_002121930.1 195953640 6744085 complement(1176495..1177766) 1 NC_011126.1 PFAM: ATP-grasp domain protein; KEGG: aae:aq_1306 succinyl-CoA synthetase beta chain; Succinate--CoA ligase 1177766 6744085 HY04AAS1_1267 Hydrogenobaculum sp. Y04AAS1 Succinate--CoA ligase YP_002121930.1 1176495 R 380749 CDS YP_002121931.1 195953641 6744086 1177858..1178547 1 NC_011126.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aae:aq_319 transcriptional regulator (PhoB-like); winged helix family two component transcriptional regulator 1178547 6744086 HY04AAS1_1268 Hydrogenobaculum sp. Y04AAS1 winged helix family two component transcriptional regulator YP_002121931.1 1177858 D 380749 CDS YP_002121932.1 195953642 6744087 1178540..1179049 1 NC_011126.1 TIGRFAM: 16S rRNA processing protein RimM; KEGG: trq:TRQ2_1231 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 1179049 6744087 HY04AAS1_1269 Hydrogenobaculum sp. Y04AAS1 16S rRNA processing protein RimM YP_002121932.1 1178540 D 380749 CDS YP_002121933.1 195953643 6744088 1179072..1180520 1 NC_011126.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: aae:aq_1612 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 1180520 6744088 HY04AAS1_1270 Hydrogenobaculum sp. Y04AAS1 UbiD family decarboxylase YP_002121933.1 1179072 D 380749 CDS YP_002121934.1 195953644 6744089 1180581..1182398 1 NC_011126.1 PFAM: flagellin domain protein; KEGG: nis:NIS_0640 flagellin; flagellin domain-containing protein 1182398 6744089 HY04AAS1_1271 Hydrogenobaculum sp. Y04AAS1 flagellin domain-containing protein YP_002121934.1 1180581 D 380749 CDS YP_002121935.1 195953645 6744090 1182524..1183654 1 NC_011126.1 KEGG: sul:SYO3AOP1_1316 hypothetical protein; hypothetical protein 1183654 6744090 HY04AAS1_1272 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121935.1 1182524 D 380749 CDS YP_002121936.1 195953646 6744091 complement(1183631..1184521) 1 NC_011126.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: cytidylyltransferase; FAD synthetase; Riboflavin kinase; KEGG: aae:aq_139 riboflavin kinase / FMN adenylyltransferase; riboflavin biosynthesis protein RibF 1184521 6744091 HY04AAS1_1273 Hydrogenobaculum sp. Y04AAS1 riboflavin biosynthesis protein RibF YP_002121936.1 1183631 R 380749 CDS YP_002121937.1 195953647 6744092 complement(1184514..1185233) 1 NC_011126.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1185233 pyrH 6744092 pyrH Hydrogenobaculum sp. Y04AAS1 uridylate kinase YP_002121937.1 1184514 R 380749 CDS YP_002121938.1 195953648 6744093 complement(1185230..1186051) 1 NC_011126.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1186051 tsf 6744093 tsf Hydrogenobaculum sp. Y04AAS1 elongation factor Ts YP_002121938.1 1185230 R 380749 CDS YP_002121939.1 195953649 6744094 complement(1186066..1186881) 1 NC_011126.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1186881 rpsB 6744094 rpsB Hydrogenobaculum sp. Y04AAS1 30S ribosomal protein S2 YP_002121939.1 1186066 R 380749 CDS YP_002121940.1 195953650 6744096 1187523..1187996 1 NC_011126.1 KEGG: sul:SYO3AOP1_1012 fimbrial protein; hypothetical protein 1187996 6744096 HY04AAS1_1277 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121940.1 1187523 D 380749 CDS YP_002121941.1 195953651 6744097 1188045..1191164 1 NC_011126.1 KEGG: pfa:PFL2540w hypothetical protein; hypothetical protein 1191164 6744097 HY04AAS1_1278 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121941.1 1188045 D 380749 CDS YP_002121942.1 195953652 6744098 complement(1191215..1192711) 1 NC_011126.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: sul:SYO3AOP1_0342 transposase; transposase, IS605 OrfB family 1192711 6744098 HY04AAS1_1279 Hydrogenobaculum sp. Y04AAS1 transposase, IS605 OrfB family YP_002121942.1 1191215 R 380749 CDS YP_002121943.1 195953653 6744099 1192826..1193167 1 NC_011126.1 KEGG: sul:SYO3AOP1_0522 hypothetical protein; hypothetical protein 1193167 6744099 HY04AAS1_1280 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121943.1 1192826 D 380749 CDS YP_002121944.1 195953654 6744100 1193196..1194098 1 NC_011126.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase-like protein 1194098 6744100 HY04AAS1_1281 Hydrogenobaculum sp. Y04AAS1 6-phosphogluconate dehydrogenase-like protein YP_002121944.1 1193196 D 380749 CDS YP_002121945.1 195953655 6744101 1194091..1195434 1 NC_011126.1 KEGG: tpt:Tpet_1595 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1195434 6744101 HY04AAS1_1282 Hydrogenobaculum sp. Y04AAS1 glucose-6-phosphate 1-dehydrogenase YP_002121945.1 1194091 D 380749 CDS YP_002121946.1 195953656 6744102 1195419..1196066 1 NC_011126.1 KEGG: trq:TRQ2_1662 6-phosphogluconolactonase; 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase-like 1196066 6744102 HY04AAS1_1283 Hydrogenobaculum sp. Y04AAS1 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase-like YP_002121946.1 1195419 D 380749 CDS YP_002121947.1 195953657 6744103 complement(1196079..1197206) 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_1896 hypothetical protein; hypothetical protein 1197206 6744103 HY04AAS1_1284 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121947.1 1196079 R 380749 CDS YP_002121948.1 195953658 6744104 complement(1197234..1199072) 1 NC_011126.1 KEGG: nis:NIS_1167 hypothetical protein; signal transduction protein 1199072 6744104 HY04AAS1_1285 Hydrogenobaculum sp. Y04AAS1 signal transduction protein YP_002121948.1 1197234 R 380749 CDS YP_002121949.1 195953659 6744105 complement(1199100..1199474) 1 NC_011126.1 KEGG: aae:aq_401 hypothetical protein; hypothetical protein 1199474 6744105 HY04AAS1_1286 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121949.1 1199100 R 380749 CDS YP_002121950.1 195953660 6744106 complement(1199557..1200195) 1 NC_011126.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1200195 ispD 6744106 ispD Hydrogenobaculum sp. Y04AAS1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002121950.1 1199557 R 380749 CDS YP_002121951.1 195953661 6744107 complement(1200196..1200543) 1 NC_011126.1 KEGG: aae:aq_2063 protein; hypothetical protein 1200543 6744107 HY04AAS1_1288 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121951.1 1200196 R 380749 CDS YP_002121952.1 195953662 6744108 complement(1200540..1201028) 1 NC_011126.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: aae:aq_269 6-pyruvoyl tetrahydrobiopterin synthase; hypothetical protein 1201028 6744108 HY04AAS1_1289 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121952.1 1200540 R 380749 CDS YP_002121953.1 195953663 6744109 complement(1201029..1201274) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0947 hypothetical protein; hypothetical protein 1201274 6744109 HY04AAS1_1290 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121953.1 1201029 R 380749 CDS YP_002121954.1 195953664 6744110 complement(1201268..1201606) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0948 hypothetical protein; hypothetical protein 1201606 6744110 HY04AAS1_1291 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121954.1 1201268 R 380749 CDS YP_002121955.1 195953665 6744111 complement(1201608..1201916) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0949 hypothetical protein; hypothetical protein 1201916 6744111 HY04AAS1_1292 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121955.1 1201608 R 380749 CDS YP_002121956.1 195953666 6744112 complement(1201913..1202155) 1 NC_011126.1 PFAM: SirA family protein; KEGG: sul:SYO3AOP1_0950 SirA family protein; SirA family protein 1202155 6744112 HY04AAS1_1293 Hydrogenobaculum sp. Y04AAS1 SirA family protein YP_002121956.1 1201913 R 380749 CDS YP_002121957.1 195953667 6744113 1202267..1203562 1 NC_011126.1 KEGG: ppd:Ppro_0262 ATPase; ATPase 1203562 6744113 HY04AAS1_1294 Hydrogenobaculum sp. Y04AAS1 ATPase YP_002121957.1 1202267 D 380749 CDS YP_002121958.1 195953668 6744114 1203570..1204274 1 NC_011126.1 KEGG: aae:aq_1010 dehydrogenase; dehydrogenase 1204274 6744114 HY04AAS1_1295 Hydrogenobaculum sp. Y04AAS1 dehydrogenase YP_002121958.1 1203570 D 380749 CDS YP_002121959.1 195953669 6744115 complement(1204264..1205043) 1 NC_011126.1 KEGG: aae:aq_325 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 1205043 6744115 HY04AAS1_1296 Hydrogenobaculum sp. Y04AAS1 glutamate racemase YP_002121959.1 1204264 R 380749 CDS YP_002121960.1 195953670 6744116 complement(1205052..1205180) 1 NC_011126.1 hypothetical protein 1205180 6744116 HY04AAS1_1297 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121960.1 1205052 R 380749 CDS YP_002121961.1 195953671 6744117 complement(1205203..1205463) 1 NC_011126.1 PFAM: helix-turn-helix domain protein; KEGG: pfo:PflO1_0204 transcriptional regulator, XRE family; XRE family transcriptional regulator 1205463 6744117 HY04AAS1_1298 Hydrogenobaculum sp. Y04AAS1 XRE family transcriptional regulator YP_002121961.1 1205203 R 380749 CDS YP_002121962.1 195953672 6744118 complement(1205474..1206661) 1 NC_011126.1 PFAM: HipA domain protein; KEGG: cch:Cag_1275 hypothetical protein; HipA domain-containing protein 1206661 6744118 HY04AAS1_1299 Hydrogenobaculum sp. Y04AAS1 HipA domain-containing protein YP_002121962.1 1205474 R 380749 CDS YP_002121963.1 195953673 6744119 1206837..1207193 1 NC_011126.1 hypothetical protein 1207193 6744119 HY04AAS1_1300 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121963.1 1206837 D 380749 CDS YP_002121964.1 195953674 6744120 1207241..1208017 1 NC_011126.1 KEGG: mxa:MXAN_1841 hypothetical protein; hypothetical protein 1208017 6744120 HY04AAS1_1301 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121964.1 1207241 D 380749 CDS YP_002121965.1 195953675 6744121 complement(1208029..1208526) 1 NC_011126.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: sul:SYO3AOP1_0698 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1208526 6744121 HY04AAS1_1302 Hydrogenobaculum sp. Y04AAS1 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002121965.1 1208029 R 380749 CDS YP_002121966.1 195953676 6744122 complement(1208536..1209972) 1 NC_011126.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: sul:SYO3AOP1_0699 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 1209972 6744122 HY04AAS1_1303 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002121966.1 1208536 R 380749 CDS YP_002121967.1 195953677 6744123 complement(1209969..1211411) 1 NC_011126.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sul:SYO3AOP1_0700 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1211411 6744123 HY04AAS1_1304 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002121967.1 1209969 R 380749 CDS YP_002121968.1 195953678 6744124 complement(1211408..1212076) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0701 hydrogenase 4 membrane component (E); hydrogenase 4 membrane component (E) 1212076 6744124 HY04AAS1_1305 Hydrogenobaculum sp. Y04AAS1 hydrogenase 4 membrane component (E) YP_002121968.1 1211408 R 380749 CDS YP_002121969.1 195953679 6744125 complement(1212086..1213003) 1 NC_011126.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sul:SYO3AOP1_0702 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1213003 6744125 HY04AAS1_1306 Hydrogenobaculum sp. Y04AAS1 respiratory-chain NADH dehydrogenase subunit 1 YP_002121969.1 1212086 R 380749 CDS YP_002121970.1 195953680 6744126 complement(1212996..1214897) 1 NC_011126.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sul:SYO3AOP1_0703 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1214897 6744126 HY04AAS1_1307 Hydrogenobaculum sp. Y04AAS1 NADH dehydrogenase (quinone) YP_002121970.1 1212996 R 380749 CDS YP_002121971.1 195953681 6744127 complement(1215033..1218050) 1 NC_011126.1 KEGG: cmi:CMM_2429 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 1218050 6744127 HY04AAS1_1308 Hydrogenobaculum sp. Y04AAS1 ribonucleoside-diphosphate reductase subunit alpha YP_002121971.1 1215033 R 380749 CDS YP_002121972.1 195953682 6744128 complement(1218121..1218939) 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: sul:SYO3AOP1_0309 glycosyl transferase family 2; family 2 glycosyl transferase 1218939 6744128 HY04AAS1_1309 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002121972.1 1218121 R 380749 CDS YP_002121973.1 195953683 6744129 complement(1218936..1219481) 1 NC_011126.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1219481 6744129 HY04AAS1_1310 Hydrogenobaculum sp. Y04AAS1 ATP-dependent protease peptidase subunit YP_002121973.1 1218936 R 380749 CDS YP_002121974.1 195953684 6744130 complement(1219472..1221436) 1 NC_011126.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: aae:aq_1765 transketolase; transketolase 1221436 6744130 HY04AAS1_1311 Hydrogenobaculum sp. Y04AAS1 transketolase YP_002121974.1 1219472 R 380749 CDS YP_002121975.1 195953685 6744131 1221614..1221820 1 NC_011126.1 hypothetical protein 1221820 6744131 HY04AAS1_1312 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121975.1 1221614 D 380749 CDS YP_002121976.1 195953686 6744132 1222092..1222190 1 NC_011126.1 hypothetical protein 1222190 6744132 HY04AAS1_1313 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121976.1 1222092 D 380749 CDS YP_002121977.1 195953687 6744133 1222233..1222559 1 NC_011126.1 SMART: Rhodanese domain protein; KEGG: tac:Ta0643 hypothetical protein; Rhodanese domain-containing protein 1222559 6744133 HY04AAS1_1314 Hydrogenobaculum sp. Y04AAS1 Rhodanese domain-containing protein YP_002121977.1 1222233 D 380749 CDS YP_002121978.1 195953688 6744134 complement(1222546..1223469) 1 NC_011126.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: sul:SYO3AOP1_1134 rubrerythrin; Rubrerythrin 1223469 6744134 HY04AAS1_1315 Hydrogenobaculum sp. Y04AAS1 Rubrerythrin YP_002121978.1 1222546 R 380749 CDS YP_002121979.1 195953689 6744135 complement(1223481..1224317) 1 NC_011126.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: sul:SYO3AOP1_0119 Linocin_M18 bacteriocin protein; Linocin_M18 bacteriocin protein 1224317 6744135 HY04AAS1_1316 Hydrogenobaculum sp. Y04AAS1 Linocin_M18 bacteriocin protein YP_002121979.1 1223481 R 380749 CDS YP_002121980.1 195953690 6744136 complement(1224372..1225916) 1 NC_011126.1 PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 1225916 6744136 HY04AAS1_1317 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121980.1 1224372 R 380749 CDS YP_002121981.1 195953691 6744137 1226061..1226507 1 NC_011126.1 hypothetical protein 1226507 6744137 HY04AAS1_1318 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121981.1 1226061 D 380749 CDS YP_002121982.1 195953692 6744138 1226461..1228293 1 NC_011126.1 KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1228293 6744138 HY04AAS1_1319 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase YP_002121982.1 1226461 D 380749 CDS YP_002121983.1 195953693 6744139 1228303..1229607 1 NC_011126.1 KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1229607 6744139 HY04AAS1_1320 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_002121983.1 1228303 D 380749 CDS YP_002121984.1 195953694 6744140 1229797..1231209 1 NC_011126.1 KEGG: aae:aq_1545 protein; hypothetical protein 1231209 6744140 HY04AAS1_1321 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121984.1 1229797 D 380749 CDS YP_002121985.1 195953695 6744141 1231211..1231843 1 NC_011126.1 PFAM: nitroreductase; KEGG: tpd:Teth39_0911 nitroreductase; nitroreductase 1231843 6744141 HY04AAS1_1322 Hydrogenobaculum sp. Y04AAS1 nitroreductase YP_002121985.1 1231211 D 380749 CDS YP_002121986.1 195953696 6744142 complement(1231859..1233184) 1 NC_011126.1 KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1233184 6744142 HY04AAS1_1323 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase YP_002121986.1 1231859 R 380749 CDS YP_002121987.1 195953697 6744143 complement(1233268..1234329) 1 NC_011126.1 PFAM: TQO small subunit DoxD; KEGG: bth:BT_0515 terminal quinol oxidase, subunit, (DoxD-like); TQO small subunit DoxD 1234329 6744143 HY04AAS1_1324 Hydrogenobaculum sp. Y04AAS1 TQO small subunit DoxD YP_002121987.1 1233268 R 380749 CDS YP_002121988.1 195953698 6744144 1234479..1235015 1 NC_011126.1 hypothetical protein 1235015 6744144 HY04AAS1_1325 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121988.1 1234479 D 380749 CDS YP_002121989.1 195953699 6744145 1235019..1236545 1 NC_011126.1 PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_2 repeat protein; KEGG: aae:aq_1796 hypothetical protein; Lytic transglycosylase 1236545 6744145 HY04AAS1_1326 Hydrogenobaculum sp. Y04AAS1 Lytic transglycosylase YP_002121989.1 1235019 D 380749 CDS YP_002121990.1 195953700 6744146 complement(1236551..1238353) 1 NC_011126.1 PFAM: von Willebrand factor type A; KEGG: aae:aq_345 hypothetical protein; von Willebrand factor type A 1238353 6744146 HY04AAS1_1327 Hydrogenobaculum sp. Y04AAS1 von Willebrand factor type A YP_002121990.1 1236551 R 380749 CDS YP_002121991.1 195953701 6744147 complement(1238350..1238727) 1 NC_011126.1 hypothetical protein 1238727 6744147 HY04AAS1_1328 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121991.1 1238350 R 380749 CDS YP_002121992.1 195953702 6744148 complement(1238798..1240219) 1 NC_011126.1 PFAM: chemotaxis sensory transducer; KEGG: nis:NIS_0600 hypothetical protein; methyl-accepting chemotaxis sensory transducer 1240219 6744148 HY04AAS1_1329 Hydrogenobaculum sp. Y04AAS1 methyl-accepting chemotaxis sensory transducer YP_002121992.1 1238798 R 380749 CDS YP_002121993.1 195953703 6744149 complement(1240241..1241371) 1 NC_011126.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aae:aq_104 hypothetical protein; geranylgeranyl reductase 1241371 6744149 HY04AAS1_1330 Hydrogenobaculum sp. Y04AAS1 geranylgeranyl reductase YP_002121993.1 1240241 R 380749 CDS YP_002121994.1 195953704 6744150 complement(1241371..1241658) 1 NC_011126.1 PFAM: ribosome-binding factor A; KEGG: lin:lin1364 ribosome-binding factor A; ribosome-binding factor A 1241658 6744150 HY04AAS1_1331 Hydrogenobaculum sp. Y04AAS1 ribosome-binding factor A YP_002121994.1 1241371 R 380749 CDS YP_002121995.1 195953705 6744151 complement(1241655..1242974) 1 NC_011126.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: aae:aq_164 transcriptional regulator (NtrC family); Fis family two component sigma-54 specific transcriptional regulator 1242974 6744151 HY04AAS1_1332 Hydrogenobaculum sp. Y04AAS1 Fis family two component sigma-54 specific transcriptional regulator YP_002121995.1 1241655 R 380749 CDS YP_002121996.1 195953706 6744152 complement(1242971..1243204) 1 NC_011126.1 hypothetical protein 1243204 6744152 HY04AAS1_1333 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002121996.1 1242971 R 380749 CDS YP_002121997.1 195953707 6744153 complement(1243191..1244456) 1 NC_011126.1 KEGG: aae:aq_1855 DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 1244456 6744153 HY04AAS1_1334 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunits gamma and tau YP_002121997.1 1243191 R 380749 CDS YP_002121998.1 195953708 6744154 1244516..1245367 1 NC_011126.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: aae:aq_038 3-hydroxyisobutyrate dehydrogenase; NAD-binding 6-phosphogluconate dehydrogenase 1245367 6744154 HY04AAS1_1335 Hydrogenobaculum sp. Y04AAS1 NAD-binding 6-phosphogluconate dehydrogenase YP_002121998.1 1244516 D 380749 CDS YP_002121999.1 195953709 6744155 1245364..1247037 1 NC_011126.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: aae:aq_2155 single-strand-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1247037 6744155 HY04AAS1_1336 Hydrogenobaculum sp. Y04AAS1 single-stranded-DNA-specific exonuclease RecJ YP_002121999.1 1245364 D 380749 CDS YP_002122000.1 195953710 6744156 1247044..1247535 1 NC_011126.1 KEGG: aae:aq_2157 protein; hypothetical protein 1247535 6744156 HY04AAS1_1337 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122000.1 1247044 D 380749 CDS YP_002122001.1 195953711 6744157 complement(1247537..1248532) 1 NC_011126.1 PFAM: Chorismate binding-like; KEGG: aae:aq_1144 para-aminobenzoate synthetase component I; chorismate binding-like protein 1248532 6744157 HY04AAS1_1338 Hydrogenobaculum sp. Y04AAS1 chorismate binding-like protein YP_002122001.1 1247537 R 380749 CDS YP_002122002.1 195953712 6744158 complement(1248508..1249233) 1 NC_011126.1 PFAM: aminotransferase class IV; KEGG: aae:aq_1606 aminodeoxychorismate lyase; class IV aminotransferase 1249233 6744158 HY04AAS1_1339 Hydrogenobaculum sp. Y04AAS1 class IV aminotransferase YP_002122002.1 1248508 R 380749 CDS YP_002122003.1 195953713 6744164 1254425..1255630 1 NC_011126.1 KEGG: aae:aq_350 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase); TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1255630 6744164 HY04AAS1_1340 Hydrogenobaculum sp. Y04AAS1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002122003.1 1254425 D 380749 CDS YP_002122004.1 195953714 6744165 1255627..1256580 1 NC_011126.1 PFAM: conserved hypothetical protein; KEGG: aae:aq_818 hypothetical protein; hypothetical protein 1256580 6744165 HY04AAS1_1341 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122004.1 1255627 D 380749 CDS YP_002122005.1 195953715 6744166 1256564..1257940 1 NC_011126.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aae:aq_819 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1257940 6744166 HY04AAS1_1342 Hydrogenobaculum sp. Y04AAS1 apolipoprotein N-acyltransferase YP_002122005.1 1256564 D 380749 CDS YP_002122006.1 195953716 6744167 1258032..1259075 1 NC_011126.1 KEGG: aae:aq_737 Mrp protein; Mrp protein 1259075 6744167 HY04AAS1_1343 Hydrogenobaculum sp. Y04AAS1 Mrp protein YP_002122006.1 1258032 D 380749 CDS YP_002122007.1 195953717 6744168 1259077..1260297 1 NC_011126.1 PFAM: aminotransferase class V; KEGG: aae:aq_739 FeS cluster formation protein NifS; class V aminotransferase 1260297 6744168 HY04AAS1_1344 Hydrogenobaculum sp. Y04AAS1 class V aminotransferase YP_002122007.1 1259077 D 380749 CDS YP_002122008.1 195953718 6744169 1260427..1261350 1 NC_011126.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aae:aq_638 transcriptional regulator (LysR family); LysR family transcriptional regulator 1261350 6744169 HY04AAS1_1345 Hydrogenobaculum sp. Y04AAS1 LysR family transcriptional regulator YP_002122008.1 1260427 D 380749 CDS YP_002122009.1 195953719 6744170 1261334..1262101 1 NC_011126.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sul:SYO3AOP1_1352 HAD-superfamily hydrolase, subfamily IA, variant 1; Haloacid dehalogenase domain-containing protein hydrolase 1262101 6744170 HY04AAS1_1346 Hydrogenobaculum sp. Y04AAS1 Haloacid dehalogenase domain-containing protein hydrolase YP_002122009.1 1261334 D 380749 CDS YP_002122010.1 195953720 6744171 complement(1262096..1262572) 1 NC_011126.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sul:SYO3AOP1_0928 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1262572 6744171 HY04AAS1_1347 Hydrogenobaculum sp. Y04AAS1 heat shock protein DnaJ domain-containing protein YP_002122010.1 1262096 R 380749 CDS YP_002122011.1 195953721 6744172 complement(1262559..1263062) 1 NC_011126.1 PFAM: CheW domain protein; KEGG: sul:SYO3AOP1_0927 chemotaxis protein CheW; chemotaxis protein CheW 1263062 6744172 HY04AAS1_1348 Hydrogenobaculum sp. Y04AAS1 chemotaxis protein CheW YP_002122011.1 1262559 R 380749 CDS YP_002122012.1 195953722 6744173 complement(1263118..1263864) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2137 ABC transport system ATP-binding protein; ABC transporter 1263864 6744173 HY04AAS1_1349 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122012.1 1263118 R 380749 CDS YP_002122013.1 195953723 6744174 complement(1263865..1264329) 1 NC_011126.1 KEGG: aae:aq_904 hypothetical protein; hypothetical protein 1264329 6744174 HY04AAS1_1350 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122013.1 1263865 R 380749 CDS YP_002122014.1 195953724 6744175 complement(1264334..1264900) 1 NC_011126.1 KEGG: aae:aq_1324 protein; hypothetical protein 1264900 6744175 HY04AAS1_1351 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122014.1 1264334 R 380749 CDS YP_002122015.1 195953725 6744176 complement(1264938..1265177) 1 NC_011126.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: sul:SYO3AOP1_0551 cell division topological specificity factor MinE; cell division topological specificity factor MinE 1265177 6744176 HY04AAS1_1352 Hydrogenobaculum sp. Y04AAS1 cell division topological specificity factor MinE YP_002122015.1 1264938 R 380749 CDS YP_002122016.1 195953726 6744177 complement(1265180..1265974) 1 NC_011126.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aae:aq_877 septum site-determining protein MinD; septum site-determining protein MinD 1265974 6744177 HY04AAS1_1353 Hydrogenobaculum sp. Y04AAS1 septum site-determining protein MinD YP_002122016.1 1265180 R 380749 CDS YP_002122017.1 195953727 6744178 complement(1265974..1266567) 1 NC_011126.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: aae:aq_878 septum site-determining protein MinC; septum site-determining protein MinC 1266567 6744178 HY04AAS1_1354 Hydrogenobaculum sp. Y04AAS1 septum site-determining protein MinC YP_002122017.1 1265974 R 380749 CDS YP_002122018.1 195953728 6744179 1266590..1267252 1 NC_011126.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aae:aq_338 ubiquinone/menaquinone biosynthesis methyltransferase; type 11 methyltransferase 1267252 6744179 HY04AAS1_1355 Hydrogenobaculum sp. Y04AAS1 type 11 methyltransferase YP_002122018.1 1266590 D 380749 CDS YP_002122019.1 195953729 6744180 complement(1267265..1268005) 1 NC_011126.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1268005 tpiA 6744180 tpiA Hydrogenobaculum sp. Y04AAS1 triosephosphate isomerase YP_002122019.1 1267265 R 380749 CDS YP_002122020.1 195953730 6744181 complement(1268243..1270948) 1 NC_011126.1 KEGG: pin:Ping_0273 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 1270948 6744181 HY04AAS1_1357 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase YP_002122020.1 1268243 R 380749 CDS YP_002122021.1 195953731 6744182 complement(1271016..1272182) 1 NC_011126.1 PFAM: ATPase; KEGG: cbd:CBUD_0184 archaeal ATPase family protein; ATPase 1272182 6744182 HY04AAS1_1358 Hydrogenobaculum sp. Y04AAS1 ATPase YP_002122021.1 1271016 R 380749 CDS YP_002122022.1 195953732 6744183 1272330..1273739 1 NC_011126.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sul:SYO3AOP1_0009 peptidase U62 modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 1273739 6744183 HY04AAS1_1359 Hydrogenobaculum sp. Y04AAS1 peptidase U62 modulator of DNA gyrase YP_002122022.1 1272330 D 380749 CDS YP_002122023.1 195953733 6744184 1273732..1274703 1 NC_011126.1 KEGG: aae:aq_1680 protein; hypothetical protein 1274703 6744184 HY04AAS1_1360 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122023.1 1273732 D 380749 CDS YP_002122024.1 195953734 6744185 1274707..1276818 1 NC_011126.1 KEGG: aae:aq_844 (p)ppGpp 3-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 1276818 6744185 HY04AAS1_1361 Hydrogenobaculum sp. Y04AAS1 (p)ppGpp synthetase I SpoT/RelA YP_002122024.1 1274707 D 380749 CDS YP_002122025.1 195953735 6744186 1276815..1278155 1 NC_011126.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_821 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1278155 6744186 HY04AAS1_1362 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_002122025.1 1276815 D 380749 CDS YP_002122026.1 195953736 6744187 1278217..1278750 1 NC_011126.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_1108 glycine cleavage system protein H; glycine cleavage H-protein 1278750 6744187 HY04AAS1_1363 Hydrogenobaculum sp. Y04AAS1 glycine cleavage H-protein YP_002122026.1 1278217 D 380749 CDS YP_002122027.1 195953737 6744188 complement(1278752..1279330) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1534 outer membrane lipoprotein carrier protein LolA; hypothetical protein 1279330 6744188 HY04AAS1_1364 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122027.1 1278752 R 380749 CDS YP_002122028.1 195953738 6744189 complement(1279320..1280420) 1 NC_011126.1 KEGG: aae:aq_1891 hypothetical protein; hypothetical protein 1280420 6744189 HY04AAS1_1365 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122028.1 1279320 R 380749 CDS YP_002122029.1 195953739 6744190 complement(1280410..1281327) 1 NC_011126.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1281327 6744190 HY04AAS1_1366 Hydrogenobaculum sp. Y04AAS1 branched-chain amino acid aminotransferase YP_002122029.1 1280410 R 380749 CDS YP_002122030.1 195953740 6744192 complement(1281487..1282116) 1 NC_011126.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aae:aq_1342 phosphoglycolate phosphatase; HAD-superfamily hydrolase 1282116 6744192 HY04AAS1_1367 Hydrogenobaculum sp. Y04AAS1 HAD-superfamily hydrolase YP_002122030.1 1281487 R 380749 CDS YP_002122031.1 195953741 6744193 complement(1282116..1282544) 1 NC_011126.1 PFAM: Protein of unknown function methylase KEGG: sul:SYO3AOP1_0182 protein of unknown function methylase; hypothetical protein 1282544 6744193 HY04AAS1_1368 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122031.1 1282116 R 380749 CDS YP_002122032.1 195953742 6744194 1282607..1283200 1 NC_011126.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1283200 6744194 HY04AAS1_1369 Hydrogenobaculum sp. Y04AAS1 phosphoheptose isomerase YP_002122032.1 1282607 D 380749 CDS YP_002122033.1 195953743 6744195 1283178..1284407 1 NC_011126.1 KEGG: aae:aq_1618 protein; hypothetical protein 1284407 6744195 HY04AAS1_1370 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122033.1 1283178 D 380749 CDS YP_002122034.1 195953744 6744196 complement(1284412..1285551) 1 NC_011126.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1285551 6744196 HY04AAS1_1371 Hydrogenobaculum sp. Y04AAS1 acetylornithine aminotransferase YP_002122034.1 1284412 R 380749 CDS YP_002122035.1 195953745 6744197 complement(1285556..1286614) 1 NC_011126.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1286614 recA 6744197 recA Hydrogenobaculum sp. Y04AAS1 recombinase A YP_002122035.1 1285556 R 380749 CDS YP_002122036.1 195953746 6744198 complement(1286622..1286906) 1 NC_011126.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: aae:aq_2147a glutamyl-tRNA (Gln) amidotransferase subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 1286906 6744198 HY04AAS1_1373 Hydrogenobaculum sp. Y04AAS1 glutamyl-tRNA(Gln) amidotransferase subunit C YP_002122036.1 1286622 R 380749 CDS YP_002122037.1 195953747 6744199 complement(1286914..1289196) 1 NC_011126.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_0133 ATPase, P-type (transporting), HAD superfamily, subfamily IC; P-type HAD superfamily ATPase 1289196 6744199 HY04AAS1_1374 Hydrogenobaculum sp. Y04AAS1 P-type HAD superfamily ATPase YP_002122037.1 1286914 R 380749 CDS YP_002122038.1 195953748 6744200 complement(1289223..1289357) 1 NC_011126.1 hypothetical protein 1289357 6744200 HY04AAS1_1375 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122038.1 1289223 R 380749 CDS YP_002122039.1 195953749 6744201 complement(1289426..1290100) 1 NC_011126.1 PFAM: flagellar L-ring protein; KEGG: aae:aq_1714 flagellar L-ring protein FlgH; flagellar L-ring protein 1290100 6744201 HY04AAS1_1376 Hydrogenobaculum sp. Y04AAS1 flagellar L-ring protein YP_002122039.1 1289426 R 380749 CDS YP_002122040.1 195953750 6744202 complement(1290109..1291434) 1 NC_011126.1 PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1664 biotin carboxylase; Carbamoyl-phosphate synthase L chain ATP-binding 1291434 6744202 HY04AAS1_1377 Hydrogenobaculum sp. Y04AAS1 Carbamoyl-phosphate synthase L chain ATP-binding YP_002122040.1 1290109 R 380749 CDS YP_002122041.1 195953751 6744203 complement(1291427..1291648) 1 NC_011126.1 PFAM: protein of unknown function DUF167; KEGG: ana:asl3196 hypothetical protein; hypothetical protein 1291648 6744203 HY04AAS1_1378 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122041.1 1291427 R 380749 CDS YP_002122042.1 195953752 6744204 complement(1291648..1292421) 1 NC_011126.1 KEGG: aae:aq_150 citrate synthase; citrate synthase 1292421 6744204 HY04AAS1_1379 Hydrogenobaculum sp. Y04AAS1 citrate synthase YP_002122042.1 1291648 R 380749 CDS YP_002122043.1 195953753 6744205 complement(1292431..1293246) 1 NC_011126.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: aae:aq_1329 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD binding protein 1293246 6744205 HY04AAS1_1380 Hydrogenobaculum sp. Y04AAS1 UBA/THIF-type NAD/FAD binding protein YP_002122043.1 1292431 R 380749 CDS YP_002122044.1 195953754 6744206 complement(1293260..1294708) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1630 YD repeat protein; hypothetical protein 1294708 6744206 HY04AAS1_1381 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122044.1 1293260 R 380749 CDS YP_002122045.1 195953755 6744207 1294792..1295826 1 NC_011126.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aae:aq_1724 transcriptional regulator (DegT/DnrJ/EryC1 family); DegT/DnrJ/EryC1/StrS aminotransferase 1295826 6744207 HY04AAS1_1382 Hydrogenobaculum sp. Y04AAS1 DegT/DnrJ/EryC1/StrS aminotransferase YP_002122045.1 1294792 D 380749 CDS YP_002122046.1 195953756 6744208 1295823..1296431 1 NC_011126.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1296431 hisH 6744208 hisH Hydrogenobaculum sp. Y04AAS1 imidazole glycerol phosphate synthase subunit HisH YP_002122046.1 1295823 D 380749 CDS YP_002122047.1 195953757 6744209 1296444..1297118 1 NC_011126.1 KEGG: aae:aq_644 protein; hypothetical protein 1297118 6744209 HY04AAS1_1384 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122047.1 1296444 D 380749 CDS YP_002122048.1 195953758 6744210 1297115..1298074 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase; family 2 glycosyl transferase 1298074 6744210 HY04AAS1_1385 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002122048.1 1297115 D 380749 CDS YP_002122049.1 195953759 6744211 1298064..1298933 1 NC_011126.1 KEGG: aae:aq_406 hypothetical protein; hypothetical protein 1298933 6744211 HY04AAS1_1386 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122049.1 1298064 D 380749 CDS YP_002122050.1 195953760 6744212 complement(1298915..1299505) 1 NC_011126.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: cch:Cag_0607 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1299505 6744212 HY04AAS1_1387 Hydrogenobaculum sp. Y04AAS1 PA-phosphatase-like phosphoesterase YP_002122050.1 1298915 R 380749 CDS YP_002122051.1 195953761 6744213 complement(1299573..1302809) 1 NC_011126.1 PFAM: acriflavin resistance protein; KEGG: aae:aq_695 cation efflux system (AcrB/AcrD/AcrF family); acriflavin resistance protein 1302809 6744213 HY04AAS1_1388 Hydrogenobaculum sp. Y04AAS1 acriflavin resistance protein YP_002122051.1 1299573 R 380749 CDS YP_002122052.1 195953762 6744214 complement(1302811..1303935) 1 NC_011126.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aae:aq_698 acriflavin resistance protein AcrE; RND family efflux transporter MFP subunit 1303935 6744214 HY04AAS1_1389 Hydrogenobaculum sp. Y04AAS1 RND family efflux transporter MFP subunit YP_002122052.1 1302811 R 380749 CDS YP_002122053.1 195953763 6744215 complement(1303937..1305328) 1 NC_011126.1 PFAM: outer membrane efflux protein; KEGG: aae:aq_699 hypothetical protein; outer membrane efflux protein 1305328 6744215 HY04AAS1_1390 Hydrogenobaculum sp. Y04AAS1 outer membrane efflux protein YP_002122053.1 1303937 R 380749 CDS YP_002122054.1 195953764 6744216 complement(1305461..1306234) 1 NC_011126.1 PFAM: ATP-NAD/AcoX kinase; KEGG: aae:aq_909 probable inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 1306234 6744216 HY04AAS1_1391 Hydrogenobaculum sp. Y04AAS1 ATP-NAD/AcoX kinase YP_002122054.1 1305461 R 380749 CDS YP_002122055.1 195953765 6744217 complement(1306231..1307253) 1 NC_011126.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: aae:aq_416 hypothetical protein; radical SAM enzyme, Cfr family 1307253 6744217 HY04AAS1_1392 Hydrogenobaculum sp. Y04AAS1 radical SAM enzyme, Cfr family YP_002122055.1 1306231 R 380749 CDS YP_002122056.1 195953766 6744218 complement(1307250..1307912) 1 NC_011126.1 PFAM: glutamine amidotransferase class-I; KEGG: sul:SYO3AOP1_1249 glutamine amidotransferase class-I; glutamine amidotransferase class-I 1307912 6744218 HY04AAS1_1393 Hydrogenobaculum sp. Y04AAS1 glutamine amidotransferase class-I YP_002122056.1 1307250 R 380749 CDS YP_002122057.1 195953767 6744219 complement(1307912..1308241) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0566 ferredoxin 2Fe-2S protein; ferredoxin 2Fe-2S protein 1308241 6744219 HY04AAS1_1394 Hydrogenobaculum sp. Y04AAS1 ferredoxin 2Fe-2S protein YP_002122057.1 1307912 R 380749 CDS YP_002122058.1 195953768 6744220 complement(1308308..1309723) 1 NC_011126.1 PFAM: Carbohydrate-selective porin OprB; KEGG: sus:Acid_2724 carbohydrate-selective porin OprB; Carbohydrate-selective porin OprB 1309723 6744220 HY04AAS1_1395 Hydrogenobaculum sp. Y04AAS1 Carbohydrate-selective porin OprB YP_002122058.1 1308308 R 380749 CDS YP_002122059.1 195953769 6744221 complement(1309768..1310790) 1 NC_011126.1 PFAM: high-affinity nickel-transporter; KEGG: yen:YE0959 nickel transport protein; high-affinity nickel-transporter 1310790 6744221 HY04AAS1_1396 Hydrogenobaculum sp. Y04AAS1 high-affinity nickel-transporter YP_002122059.1 1309768 R 380749 CDS YP_002122060.1 195953770 6744222 complement(1310857..1311276) 1 NC_011126.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: ccv:CCV52592_1897 NikR C nickel binding domain family; CopG family transcriptional regulator 1311276 6744222 HY04AAS1_1397 Hydrogenobaculum sp. Y04AAS1 CopG family transcriptional regulator YP_002122060.1 1310857 R 380749 CDS YP_002122061.1 195953771 6744223 1311291..1311878 1 NC_011126.1 PFAM: regulatory protein TetR; KEGG: aae:aq_321 hypothetical protein; TetR family transcriptional regulator 1311878 6744223 HY04AAS1_1398 Hydrogenobaculum sp. Y04AAS1 TetR family transcriptional regulator YP_002122061.1 1311291 D 380749 CDS YP_002122062.1 195953772 6744224 1311875..1312759 1 NC_011126.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: aae:aq_802 hydrogenase small chain; NADH ubiquinone oxidoreductase 20 kDa subunit 1312759 6744224 HY04AAS1_1399 Hydrogenobaculum sp. Y04AAS1 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002122062.1 1311875 D 380749 CDS YP_002122063.1 195953773 6744225 1312756..1314075 1 NC_011126.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: aae:aq_804 hydrogenase large chain; nickel-dependent hydrogenase large subunit 1314075 6744225 HY04AAS1_1400 Hydrogenobaculum sp. Y04AAS1 nickel-dependent hydrogenase large subunit YP_002122063.1 1312756 D 380749 CDS YP_002122064.1 195953774 6744226 1314186..1316318 1 NC_011126.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1316318 6744226 HY04AAS1_1401 Hydrogenobaculum sp. Y04AAS1 anaerobic ribonucleoside triphosphate reductase YP_002122064.1 1314186 D 380749 CDS YP_002122065.1 195953775 6744227 1316403..1317107 1 NC_011126.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: pmo:Pmob_0979 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1317107 6744227 HY04AAS1_1402 Hydrogenobaculum sp. Y04AAS1 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002122065.1 1316403 D 380749 CDS YP_002122066.1 195953776 6744228 complement(1317147..1319024) 1 NC_011126.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1319024 dnaK 6744228 dnaK Hydrogenobaculum sp. Y04AAS1 molecular chaperone DnaK YP_002122066.1 1317147 R 380749 CDS YP_002122067.1 195953777 6744229 1319199..1319297 1 NC_011126.1 hypothetical protein 1319297 6744229 HY04AAS1_1404 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122067.1 1319199 D 380749 CDS YP_002122068.1 195953778 6744230 1319290..1322658 1 NC_011126.1 KEGG: sul:SYO3AOP1_0011 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1322658 6744230 HY04AAS1_1405 Hydrogenobaculum sp. Y04AAS1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_002122068.1 1319290 D 380749 CDS YP_002122069.1 195953779 6744231 complement(1322655..1323122) 1 NC_011126.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aae:aq_495 bacterioferritin comigratory protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1323122 6744231 HY04AAS1_1406 Hydrogenobaculum sp. Y04AAS1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_002122069.1 1322655 R 380749 CDS YP_002122070.1 195953780 6744232 complement(1323133..1324191) 1 NC_011126.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_789 hypothetical protein; Radical SAM domain-containing protein 1324191 6744232 HY04AAS1_1407 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002122070.1 1323133 R 380749 CDS YP_002122071.1 195953781 6744233 1324301..1324642 1 NC_011126.1 hypothetical protein 1324642 6744233 HY04AAS1_1408 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122071.1 1324301 D 380749 CDS YP_002122072.1 195953782 6744234 complement(1324639..1326324) 1 NC_011126.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1326324 6744234 HY04AAS1_1409 Hydrogenobaculum sp. Y04AAS1 NAD synthetase YP_002122072.1 1324639 R 380749 CDS YP_002122073.1 195953783 6744235 complement(1326305..1327798) 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; diguanylate cyclase 1327798 6744235 HY04AAS1_1410 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase YP_002122073.1 1326305 R 380749 CDS YP_002122074.1 195953784 6744236 complement(1327785..1328327) 1 NC_011126.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: aae:aq_152 thiol disulfide interchange protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1328327 6744236 HY04AAS1_1411 Hydrogenobaculum sp. Y04AAS1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_002122074.1 1327785 R 380749 CDS YP_002122075.1 195953785 6744237 complement(1328324..1329568) 1 NC_011126.1 PFAM: cell division protein FtsA; KEGG: aae:aq_523 cell division protein FtsA; cell division protein FtsA 1329568 6744237 HY04AAS1_1412 Hydrogenobaculum sp. Y04AAS1 cell division protein FtsA YP_002122075.1 1328324 R 380749 CDS YP_002122076.1 195953786 6744238 complement(1329645..1330928) 1 NC_011126.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: aae:aq_1812 homoserine dehydrogenase; Homoserine dehydrogenase 1330928 6744238 HY04AAS1_1413 Hydrogenobaculum sp. Y04AAS1 Homoserine dehydrogenase YP_002122076.1 1329645 R 380749 CDS YP_002122077.1 195953787 6744239 1330982..1331836 1 NC_011126.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1331836 6744239 HY04AAS1_1414 Hydrogenobaculum sp. Y04AAS1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002122077.1 1330982 D 380749 CDS YP_002122078.1 195953788 6744240 1331821..1332819 1 NC_011126.1 PFAM: PhoH family protein; KEGG: aae:aq_1351 phosphate starvation-inducible protein; PhoH family protein 1332819 6744240 HY04AAS1_1415 Hydrogenobaculum sp. Y04AAS1 PhoH family protein YP_002122078.1 1331821 D 380749 CDS YP_002122079.1 195953789 6744241 1332782..1333216 1 NC_011126.1 PFAM: protein of unknown function UPF0054; KEGG: aae:aq_1354 hypothetical protein; hypothetical protein 1333216 6744241 HY04AAS1_1416 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122079.1 1332782 D 380749 CDS YP_002122080.1 195953790 6744242 complement(1333256..1334410) 1 NC_011126.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aae:aq_2073 hypothetical protein; cation diffusion facilitator family transporter 1334410 6744242 HY04AAS1_1417 Hydrogenobaculum sp. Y04AAS1 cation diffusion facilitator family transporter YP_002122080.1 1333256 R 380749 CDS YP_002122081.1 195953791 6744243 complement(1334445..1335383) 1 NC_011126.1 KEGG: aae:aq_632 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 1335383 6744243 HY04AAS1_1418 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122081.1 1334445 R 380749 CDS YP_002122082.1 195953792 6744244 complement(1335434..1335712) 1 NC_011126.1 SMART: Cystinosin/ERS1p repeat; KEGG: sul:SYO3AOP1_0862 hypothetical protein; Cystinosin/ERS1p repeat 1335712 6744244 HY04AAS1_1419 Hydrogenobaculum sp. Y04AAS1 Cystinosin/ERS1p repeat YP_002122082.1 1335434 R 380749 CDS YP_002122083.1 195953793 6744245 complement(1335709..1336614) 1 NC_011126.1 KEGG: aae:aq_362 hypothetical protein; ADP-heptose:LPS heptosyltransferase-like protein 1336614 6744245 HY04AAS1_1420 Hydrogenobaculum sp. Y04AAS1 ADP-heptose:LPS heptosyltransferase-like protein YP_002122083.1 1335709 R 380749 CDS YP_002122084.1 195953794 6744246 complement(1336611..1337474) 1 NC_011126.1 PFAM: ROK family protein; KEGG: sfu:Sfum_1953 ROK family protein; ROK family protein 1337474 6744246 HY04AAS1_1421 Hydrogenobaculum sp. Y04AAS1 ROK family protein YP_002122084.1 1336611 R 380749 CDS YP_002122085.1 195953795 6744247 1337552..1338037 1 NC_011126.1 KEGG: sul:SYO3AOP1_1572 hypothetical protein; hypothetical protein 1338037 6744247 HY04AAS1_1422 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122085.1 1337552 D 380749 CDS YP_002122086.1 195953796 6744248 complement(1338042..1341575) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0491 hypothetical protein; hypothetical protein 1341575 6744248 HY04AAS1_1423 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122086.1 1338042 R 380749 CDS YP_002122087.1 195953797 6744249 complement(1341609..1341809) 1 NC_011126.1 hypothetical protein 1341809 6744249 HY04AAS1_1424 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122087.1 1341609 R 380749 CDS YP_002122088.1 195953798 6744250 complement(1341806..1344961) 1 NC_011126.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: sul:SYO3AOP1_0490 helicase domain protein; helicase domain-containing protein 1344961 6744250 HY04AAS1_1425 Hydrogenobaculum sp. Y04AAS1 helicase domain-containing protein YP_002122088.1 1341806 R 380749 CDS YP_002122089.1 195953799 6744251 complement(1344987..1345949) 1 NC_011126.1 KEGG: aae:aq_660 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 1345949 6744251 HY04AAS1_1426 Hydrogenobaculum sp. Y04AAS1 hydrogenase (NiFe) small subunit HydA YP_002122089.1 1344987 R 380749 CDS YP_002122090.1 195953800 6744252 complement(1345984..1346256) 1 NC_011126.1 hypothetical protein 1346256 6744252 HY04AAS1_1427 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122090.1 1345984 R 380749 CDS YP_002122091.1 195953801 6744253 1346352..1346579 1 NC_011126.1 PFAM: FeoA family protein; FeoA family protein 1346579 6744253 HY04AAS1_1428 Hydrogenobaculum sp. Y04AAS1 FeoA family protein YP_002122091.1 1346352 D 380749 CDS YP_002122092.1 195953802 6744254 1346603..1348696 1 NC_011126.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: aae:aq_1255 ferrous iron transport protein B; ferrous iron transport protein B 1348696 6744254 HY04AAS1_1429 Hydrogenobaculum sp. Y04AAS1 ferrous iron transport protein B YP_002122092.1 1346603 D 380749 CDS YP_002122093.1 195953803 6744256 1349091..1349366 1 NC_011126.1 hypothetical protein 1349366 6744256 HY04AAS1_1430 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122093.1 1349091 D 380749 CDS YP_002122094.1 195953804 6744257 1349370..1350062 1 NC_011126.1 PFAM: Haem oxygenase-like; KEGG: cyt:cce_2324 heme oxygenase; Heme oxygenase 1350062 6744257 HY04AAS1_1431 Hydrogenobaculum sp. Y04AAS1 Heme oxygenase YP_002122094.1 1349370 D 380749 CDS YP_002122095.1 195953805 6744258 1350125..1351390 1 NC_011126.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: aae:aq_1512 isocitrate dehydrogenase; isocitrate/isopropylmalate dehydrogenase 1351390 6744258 HY04AAS1_1432 Hydrogenobaculum sp. Y04AAS1 isocitrate/isopropylmalate dehydrogenase YP_002122095.1 1350125 D 380749 CDS YP_002122096.1 195953806 6744259 1351406..1351822 1 NC_011126.1 PFAM: OsmC family protein; KEGG: aae:aq_1515 hypothetical protein; OsmC family protein 1351822 6744259 HY04AAS1_1433 Hydrogenobaculum sp. Y04AAS1 OsmC family protein YP_002122096.1 1351406 D 380749 CDS YP_002122097.1 195953807 6744260 1351827..1353245 1 NC_011126.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: aae:aq_1517 pyruvate carboxylase subunit A; acetyl-CoA carboxylase, biotin carboxylase 1353245 6744260 HY04AAS1_1434 Hydrogenobaculum sp. Y04AAS1 acetyl-CoA carboxylase, biotin carboxylase YP_002122097.1 1351827 D 380749 CDS YP_002122098.1 195953808 6744261 1353258..1355174 1 NC_011126.1 catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 1355174 6744261 HY04AAS1_1435 Hydrogenobaculum sp. Y04AAS1 pyruvate carboxylase subunit B YP_002122098.1 1353258 D 380749 CDS YP_002122099.1 195953809 6744262 1355308..1357131 1 NC_011126.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sul:SYO3AOP1_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1357131 6744262 HY04AAS1_1436 Hydrogenobaculum sp. Y04AAS1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002122099.1 1355308 D 380749 CDS YP_002122100.1 195953810 6744263 1357142..1358041 1 NC_011126.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sul:SYO3AOP1_0617 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 1358041 6744263 HY04AAS1_1437 Hydrogenobaculum sp. Y04AAS1 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_002122100.1 1357142 D 380749 CDS YP_002122101.1 195953811 6744264 1358038..1358646 1 NC_011126.1 PFAM: pentapeptide repeat protein; KEGG: sul:SYO3AOP1_0707 pentapeptide repeat protein; pentapeptide repeat-containing protein 1358646 6744264 HY04AAS1_1438 Hydrogenobaculum sp. Y04AAS1 pentapeptide repeat-containing protein YP_002122101.1 1358038 D 380749 CDS YP_002122102.1 195953812 6744265 1358646..1359209 1 NC_011126.1 KEGG: bid:Bind_2816 hypothetical protein; hypothetical protein 1359209 6744265 HY04AAS1_1439 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122102.1 1358646 D 380749 CDS YP_002122103.1 195953813 6744266 1359234..1360964 1 NC_011126.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; KEGG: aae:aq_1422 hypothetical DNA polymerase / histidinol phosphatase; PHP domain-containing protein 1360964 6744266 HY04AAS1_1440 Hydrogenobaculum sp. Y04AAS1 PHP domain-containing protein YP_002122103.1 1359234 D 380749 CDS YP_002122104.1 195953814 6744267 1360945..1363410 1 NC_011126.1 PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: aae:aq_411 tRNA nucleotidyltransferase (CCA-adding enzyme); Polynucleotide adenylyltransferase region 1363410 6744267 HY04AAS1_1441 Hydrogenobaculum sp. Y04AAS1 Polynucleotide adenylyltransferase region YP_002122104.1 1360945 D 380749 CDS YP_002122105.1 195953815 6744270 1363686..1364759 1 NC_011126.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sus:Acid_0685 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 1364759 6744270 HY04AAS1_1442 Hydrogenobaculum sp. Y04AAS1 NADH:flavin oxidoreductase/NADH oxidase YP_002122105.1 1363686 D 380749 CDS YP_002122106.1 195953816 6744271 1364891..1366021 1 NC_011126.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sul:SYO3AOP1_1602 diguanylate cyclase/phosphodiesterase; diguanylate cyclase 1366021 6744271 HY04AAS1_1443 Hydrogenobaculum sp. Y04AAS1 diguanylate cyclase YP_002122106.1 1364891 D 380749 CDS YP_002122107.1 195953817 6744272 1365993..1367921 1 NC_011126.1 KEGG: sul:SYO3AOP1_1604 hypothetical protein; hypothetical protein 1367921 6744272 HY04AAS1_1444 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122107.1 1365993 D 380749 CDS YP_002122108.1 195953818 6744273 1367921..1368352 1 NC_011126.1 KEGG: sul:SYO3AOP1_1603 hypothetical protein; hypothetical protein 1368352 6744273 HY04AAS1_1445 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122108.1 1367921 D 380749 CDS YP_002122109.1 195953819 6744274 1368388..1369689 1 NC_011126.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: aae:aq_597 adenylosuccinate lyase; adenylosuccinate lyase 1369689 6744274 HY04AAS1_1446 Hydrogenobaculum sp. Y04AAS1 adenylosuccinate lyase YP_002122109.1 1368388 D 380749 CDS YP_002122110.1 195953820 6744275 1369686..1370267 1 NC_011126.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_1480 CDPdiacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1370267 6744275 HY04AAS1_1447 Hydrogenobaculum sp. Y04AAS1 CDP-alcohol phosphatidyltransferase YP_002122110.1 1369686 D 380749 CDS YP_002122111.1 195953821 6744277 complement(1371206..1371871) 1 NC_011126.1 TIGRFAM: glutaredoxin-like domain protein; KEGG: aae:aq_443 glutaredoxin-like protein; glutaredoxin-like domain-containing protein 1371871 6744277 HY04AAS1_1449 Hydrogenobaculum sp. Y04AAS1 glutaredoxin-like domain-containing protein YP_002122111.1 1371206 R 380749 CDS YP_002122112.1 195953822 6744278 complement(1371934..1372338) 1 NC_011126.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: sul:SYO3AOP1_1768 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 1372338 6744278 HY04AAS1_1450 Hydrogenobaculum sp. Y04AAS1 hemerythrin-like metal-binding protein YP_002122112.1 1371934 R 380749 CDS YP_002122113.1 195953823 6744279 1372521..1373489 1 NC_011126.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: aae:aq_500 thioredoxin reductase; thioredoxin reductase 1373489 6744279 HY04AAS1_1451 Hydrogenobaculum sp. Y04AAS1 thioredoxin reductase YP_002122113.1 1372521 D 380749 CDS YP_002122114.1 195953824 6744280 1373503..1373946 1 NC_011126.1 KEGG: aae:aq_250 hypothetical protein; TraR/DksA family transcriptional regulator 1373946 6744280 HY04AAS1_1452 Hydrogenobaculum sp. Y04AAS1 TraR/DksA family transcriptional regulator YP_002122114.1 1373503 D 380749 CDS YP_002122115.1 195953825 6744281 1373949..1375382 1 NC_011126.1 KEGG: aae:aq_247 glutamyl-tRNA (Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1375382 6744281 HY04AAS1_1453 Hydrogenobaculum sp. Y04AAS1 glutamyl-tRNA(Gln) amidotransferase subunit A YP_002122115.1 1373949 D 380749 CDS YP_002122116.1 195953826 6744282 1375376..1375921 1 NC_011126.1 KEGG: aae:aq_082 hypothetical protein; hypothetical protein 1375921 6744282 HY04AAS1_1454 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122116.1 1375376 D 380749 CDS YP_002122117.1 195953827 6744283 1375921..1378068 1 NC_011126.1 PFAM: UvrD/REP helicase; KEGG: aae:aq_793 ATP-dependent DNA helicase REP; UvrD/REP helicase 1378068 6744283 HY04AAS1_1455 Hydrogenobaculum sp. Y04AAS1 UvrD/REP helicase YP_002122117.1 1375921 D 380749 CDS YP_002122118.1 195953828 6744284 1378065..1379282 1 NC_011126.1 PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein; KEGG: aae:aq_1863 potassium channel protein; Ion transport 2 domain-containing protein 1379282 6744284 HY04AAS1_1456 Hydrogenobaculum sp. Y04AAS1 Ion transport 2 domain-containing protein YP_002122118.1 1378065 D 380749 CDS YP_002122119.1 195953829 6744285 1379295..1380263 1 NC_011126.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_0164 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1380263 6744285 HY04AAS1_1457 Hydrogenobaculum sp. Y04AAS1 NAD-dependent epimerase/dehydratase YP_002122119.1 1379295 D 380749 CDS YP_002122120.1 195953830 6744286 complement(1380264..1380680) 1 NC_011126.1 PFAM: protein of unknown function DUF461; KEGG: rpa:RPA2931 DUF461; hypothetical protein 1380680 6744286 HY04AAS1_1458 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122120.1 1380264 R 380749 CDS YP_002122121.1 195953831 6744287 1380779..1381012 1 NC_011126.1 hypothetical protein 1381012 6744287 HY04AAS1_1459 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122121.1 1380779 D 380749 CDS YP_002122122.1 195953832 6744288 1381009..1382229 1 NC_011126.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_1684 major facilitator superfamily MFS_1; major facilitator superfamily protein 1382229 6744288 HY04AAS1_1460 Hydrogenobaculum sp. Y04AAS1 major facilitator superfamily protein YP_002122122.1 1381009 D 380749 CDS YP_002122123.1 195953833 6744289 1382226..1383314 1 NC_011126.1 PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_1755 glycosyl transferase group 1; group 1 glycosyl transferase 1383314 6744289 HY04AAS1_1461 Hydrogenobaculum sp. Y04AAS1 group 1 glycosyl transferase YP_002122123.1 1382226 D 380749 CDS YP_002122124.1 195953834 6744291 1383444..1384235 1 NC_011126.1 KEGG: aae:aq_1794 hypothetical protein; hypothetical protein 1384235 6744291 HY04AAS1_1462 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122124.1 1383444 D 380749 CDS YP_002122125.1 195953835 6744292 1384243..1384974 1 NC_011126.1 KEGG: aae:aq_1583 protein; hypothetical protein 1384974 6744292 HY04AAS1_1463 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122125.1 1384243 D 380749 CDS YP_002122126.1 195953836 6744293 1384971..1385861 1 NC_011126.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_F1823 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1385861 6744293 HY04AAS1_1464 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122126.1 1384971 D 380749 CDS YP_002122127.1 195953837 6744294 1385848..1386714 1 NC_011126.1 PFAM: UbiA prenyltransferase; KEGG: cdf:CD0982 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; UbiA prenyltransferase 1386714 6744294 HY04AAS1_1465 Hydrogenobaculum sp. Y04AAS1 UbiA prenyltransferase YP_002122127.1 1385848 D 380749 CDS YP_002122128.1 195953838 6744295 complement(1386711..1387502) 1 NC_011126.1 KEGG: aae:aq_1800 protein; hypothetical protein 1387502 6744295 HY04AAS1_1466 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122128.1 1386711 R 380749 CDS YP_002122129.1 195953839 6744296 complement(1387511..1389250) 1 NC_011126.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: aae:aq_1803 sulfur oxidation protein SoxB; 5'-Nucleotidase domain-containing protein 1389250 6744296 HY04AAS1_1467 Hydrogenobaculum sp. Y04AAS1 5'-Nucleotidase domain-containing protein YP_002122129.1 1387511 R 380749 CDS YP_002122130.1 195953840 6744297 complement(1389261..1389590) 1 NC_011126.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: aae:aq_1809 hypothetical protein; sulfur oxidation protein SoxZ 1389590 6744297 HY04AAS1_1468 Hydrogenobaculum sp. Y04AAS1 sulfur oxidation protein SoxZ YP_002122130.1 1389261 R 380749 CDS YP_002122131.1 195953841 6744298 complement(1389607..1389912) 1 NC_011126.1 KEGG: acr:Acry_2479 hypothetical protein; hypothetical protein 1389912 6744298 HY04AAS1_1469 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122131.1 1389607 R 380749 CDS YP_002122132.1 195953842 6744299 complement(1389905..1390393) 1 NC_011126.1 KEGG: aae:aq_1810 hypothetical protein; hypothetical protein 1390393 6744299 HY04AAS1_1470 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122132.1 1389905 R 380749 CDS YP_002122133.1 195953843 6744300 complement(1390387..1390800) 1 NC_011126.1 KEGG: aae:aq_1811 thioredoxin; thioredoxin 1390800 6744300 HY04AAS1_1471 Hydrogenobaculum sp. Y04AAS1 thioredoxin YP_002122133.1 1390387 R 380749 CDS YP_002122134.1 195953844 6744301 complement(1390797..1391252) 1 NC_011126.1 PFAM: Domain of unknown function DUF1791; KEGG: sul:SYO3AOP1_0504 domain of unknown function DUF1791; hypothetical protein 1391252 6744301 HY04AAS1_1472 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122134.1 1390797 R 380749 CDS YP_002122135.1 195953845 6744302 complement(1391305..1392789) 1 NC_011126.1 KEGG: aae:aq_1862 hypothetical protein; hypothetical protein 1392789 6744302 HY04AAS1_1473 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122135.1 1391305 R 380749 CDS YP_002122136.1 195953846 6744303 1392963..1393523 1 NC_011126.1 KEGG: sfu:Sfum_1840 hypothetical protein; hypothetical protein 1393523 6744303 HY04AAS1_1474 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122136.1 1392963 D 380749 CDS YP_002122137.1 195953847 6744304 1393560..1394150 1 NC_011126.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: aae:aq_549 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase 1394150 6744304 HY04AAS1_1475 Hydrogenobaculum sp. Y04AAS1 glutamine amidotransferase of anthranilate synthase YP_002122137.1 1393560 D 380749 CDS YP_002122138.1 195953848 6744305 1394171..1394353 1 NC_011126.1 hypothetical protein 1394353 6744305 HY04AAS1_1476 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122138.1 1394171 D 380749 CDS YP_002122139.1 195953849 6744306 1394359..1395147 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aoe:Clos_2585 ABC transporter; ABC transporter 1395147 6744306 HY04AAS1_1477 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122139.1 1394359 D 380749 CDS YP_002122140.1 195953850 6744307 1395148..1395912 1 NC_011126.1 PFAM: ABC transporter; KEGG: cte:CT0183 ABC-type drug export system, membrane protein; ABC transporter 1395912 6744307 HY04AAS1_1478 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122140.1 1395148 D 380749 CDS YP_002122141.1 195953851 6744309 complement(1396053..1396355) 1 NC_011126.1 hypothetical protein 1396355 6744309 HY04AAS1_1479 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122141.1 1396053 R 380749 CDS YP_002122142.1 195953852 6744310 1396465..1396962 1 NC_011126.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aae:aq_067 dimethylsulfoxide reductase chain B; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1396962 6744310 HY04AAS1_1480 Hydrogenobaculum sp. Y04AAS1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002122142.1 1396465 D 380749 CDS YP_002122143.1 195953853 6744311 1396928..1398319 1 NC_011126.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_1747 UDP-MurNac-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase 1398319 6744311 HY04AAS1_1481 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylmuramyl-tripeptide synthetase YP_002122143.1 1396928 D 380749 CDS YP_002122144.1 195953854 6744312 1398346..1398981 1 NC_011126.1 KEGG: aae:aq_496 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 1398981 6744312 HY04AAS1_1482 Hydrogenobaculum sp. Y04AAS1 endonuclease III YP_002122144.1 1398346 D 380749 CDS YP_002122145.1 195953855 6744313 1398978..1399280 1 NC_011126.1 hypothetical protein 1399280 6744313 HY04AAS1_1483 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122145.1 1398978 D 380749 CDS YP_002122146.1 195953856 6744314 1399280..1401328 1 NC_011126.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: aae:aq_1212 flagellar export protein; flagellar biosynthesis protein FlhA 1401328 6744314 HY04AAS1_1484 Hydrogenobaculum sp. Y04AAS1 flagellar biosynthesis protein FlhA YP_002122146.1 1399280 D 380749 CDS YP_002122147.1 195953857 6744315 1401318..1402439 1 NC_011126.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: aae:aq_1214 flagellar biosynthesis FlhF; GTP-binding signal recognition particle SRP54 G- domain 1402439 6744315 HY04AAS1_1485 Hydrogenobaculum sp. Y04AAS1 GTP-binding signal recognition particle SRP54 G- domain YP_002122147.1 1401318 D 380749 CDS YP_002122148.1 195953858 6744316 1402436..1403272 1 NC_011126.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aae:aq_1217 septum site-determining protein MinD; Cobyrinic acid ac-diamide synthase 1403272 6744316 HY04AAS1_1486 Hydrogenobaculum sp. Y04AAS1 Cobyrinic acid ac-diamide synthase YP_002122148.1 1402436 D 380749 CDS YP_002122149.1 195953859 6744317 1403269..1404006 1 NC_011126.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: aae:aq_1693 N-terminus of phage SPO1 DNA polymerase; phage SPO1 DNA polymerase-like protein 1404006 6744317 HY04AAS1_1487 Hydrogenobaculum sp. Y04AAS1 phage SPO1 DNA polymerase-like protein YP_002122149.1 1403269 D 380749 CDS YP_002122150.1 195953860 6744318 complement(1404009..1404518) 1 NC_011126.1 PFAM: PEBP family protein; KEGG: aae:aq_1250 hypothetical protein; PEBP family protein 1404518 6744318 HY04AAS1_1488 Hydrogenobaculum sp. Y04AAS1 PEBP family protein YP_002122150.1 1404009 R 380749 CDS YP_002122151.1 195953861 6744319 complement(1404522..1406963) 1 NC_011126.1 PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: aae:aq_1296 ATP-dependent Clp protease; ATPase AAA-2 domain-containing protein 1406963 6744319 HY04AAS1_1489 Hydrogenobaculum sp. Y04AAS1 ATPase AAA-2 domain-containing protein YP_002122151.1 1404522 R 380749 CDS YP_002122152.1 195953862 6744320 complement(1407051..1408964) 1 NC_011126.1 PFAM: transglutaminase domain protein; KEGG: sul:SYO3AOP1_1521 transglutaminase domain protein; transglutaminase domain-containing protein 1408964 6744320 HY04AAS1_1490 Hydrogenobaculum sp. Y04AAS1 transglutaminase domain-containing protein YP_002122152.1 1407051 R 380749 CDS YP_002122153.1 195953863 6744322 complement(1409053..1410660) 1 NC_011126.1 PFAM: ResB family protein; KEGG: aae:aq_2082 cytochrome c biogenesis protein; ResB family protein 1410660 6744322 HY04AAS1_1491 Hydrogenobaculum sp. Y04AAS1 ResB family protein YP_002122153.1 1409053 R 380749 CDS YP_002122154.1 195953864 6744323 complement(1410657..1410917) 1 NC_011126.1 hypothetical protein 1410917 6744323 HY04AAS1_1492 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122154.1 1410657 R 380749 CDS YP_002122155.1 195953865 6744324 complement(1410914..1411429) 1 NC_011126.1 KEGG: aae:aq_579 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 1411429 6744324 HY04AAS1_1493 Hydrogenobaculum sp. Y04AAS1 peptide deformylase YP_002122155.1 1410914 R 380749 CDS YP_002122156.1 195953866 6744325 complement(1411508..1412359) 1 NC_011126.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: aae:aq_731 cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane region 1412359 6744325 HY04AAS1_1494 Hydrogenobaculum sp. Y04AAS1 cytochrome c biogenesis protein transmembrane region YP_002122156.1 1411508 R 380749 CDS YP_002122157.1 195953867 6744326 complement(1412372..1413865) 1 NC_011126.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: sul:SYO3AOP1_0967 integral membrane protein MviN; integral membrane protein MviN 1413865 6744326 HY04AAS1_1495 Hydrogenobaculum sp. Y04AAS1 integral membrane protein MviN YP_002122157.1 1412372 R 380749 CDS YP_002122158.1 195953868 6744327 complement(1413862..1414491) 1 NC_011126.1 PFAM: Endonuclease V; KEGG: aae:aq_548 hypothetical endonuclease V (deoxyinosine 3'endonuclease); Deoxyribonuclease V 1414491 6744327 HY04AAS1_1496 Hydrogenobaculum sp. Y04AAS1 Deoxyribonuclease V YP_002122158.1 1413862 R 380749 CDS YP_002122159.1 195953869 6744328 complement(1414551..1415147) 1 NC_011126.1 PFAM: AMMECR1 domain protein; KEGG: aae:aq_1444 hypothetical protein; AMMECR1 domain-containing protein 1415147 6744328 HY04AAS1_1497 Hydrogenobaculum sp. Y04AAS1 AMMECR1 domain-containing protein YP_002122159.1 1414551 R 380749 CDS YP_002122160.1 195953870 6744330 1415341..1416465 1 NC_011126.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: dar:Daro_3955 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 1416465 6744330 HY04AAS1_1499 Hydrogenobaculum sp. Y04AAS1 filamentation induced by cAMP protein Fic YP_002122160.1 1415341 D 380749 CDS YP_002122161.1 195953871 6744331 1416462..1416647 1 NC_011126.1 hypothetical protein 1416647 6744331 HY04AAS1_1500 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122161.1 1416462 D 380749 CDS YP_002122162.1 195953872 6744332 1416899..1417084 1 NC_011126.1 KEGG: cbf:CLI_1132 hypothetical protein; hypothetical protein 1417084 6744332 HY04AAS1_1501 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122162.1 1416899 D 380749 CDS YP_002122163.1 195953873 6744333 1417123..1419390 1 NC_011126.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 1419390 6744333 HY04AAS1_1502 Hydrogenobaculum sp. Y04AAS1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_002122163.1 1417123 D 380749 CDS YP_002122164.1 195953874 6744334 1419401..1420339 1 NC_011126.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1420339 hemH 6744334 hemH Hydrogenobaculum sp. Y04AAS1 ferrochelatase YP_002122164.1 1419401 D 380749 CDS YP_002122165.1 195953875 6744335 complement(1420291..1420815) 1 NC_011126.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: aae:aq_1706 hypothetical protein; PA-phosphatase-like phosphoesterase 1420815 6744335 HY04AAS1_1504 Hydrogenobaculum sp. Y04AAS1 PA-phosphatase-like phosphoesterase YP_002122165.1 1420291 R 380749 CDS YP_002122166.1 195953876 6744336 complement(1420818..1421726) 1 NC_011126.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: aae:aq_2131 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1421726 6744336 HY04AAS1_1505 Hydrogenobaculum sp. Y04AAS1 methionyl-tRNA formyltransferase YP_002122166.1 1420818 R 380749 CDS YP_002122167.1 195953877 6744337 complement(1421723..1422286) 1 NC_011126.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: aae:aq_528 phenylacrylic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1422286 6744337 HY04AAS1_1506 Hydrogenobaculum sp. Y04AAS1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002122167.1 1421723 R 380749 CDS YP_002122168.1 195953878 6744338 complement(1422283..1422912) 1 NC_011126.1 KEGG: csc:Csac_1889 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1422912 6744338 HY04AAS1_1507 Hydrogenobaculum sp. Y04AAS1 cytidylate kinase YP_002122168.1 1422283 R 380749 CDS YP_002122169.1 195953879 6744339 complement(1422974..1423195) 1 NC_011126.1 hypothetical protein 1423195 6744339 HY04AAS1_1508 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122169.1 1422974 R 380749 CDS YP_002122170.1 195953880 6744340 complement(1423206..1423394) 1 NC_011126.1 SMART: zinc finger CDGSH-type domain protein; KEGG: mse:Msed_0266 zinc finger, CDGSH-type domain protein; zinc finger CDGSH-type domain-containing protein 1423394 6744340 HY04AAS1_1509 Hydrogenobaculum sp. Y04AAS1 zinc finger CDGSH-type domain-containing protein YP_002122170.1 1423206 R 380749 CDS YP_002122171.1 195953881 6744341 complement(1423510..1424712) 1 NC_011126.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aae:aq_728 ornithine decarboxylase; Ornithine decarboxylase 1424712 6744341 HY04AAS1_1510 Hydrogenobaculum sp. Y04AAS1 Ornithine decarboxylase YP_002122171.1 1423510 R 380749 CDS YP_002122172.1 195953882 6744342 complement(1424743..1425936) 1 NC_011126.1 KEGG: aae:aq_682 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 1425936 6744342 HY04AAS1_1511 Hydrogenobaculum sp. Y04AAS1 arsenite-activated ATPase ArsA YP_002122172.1 1424743 R 380749 CDS YP_002122173.1 195953883 6744343 complement(1425975..1426640) 1 NC_011126.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aae:aq_1977 enolase-phosphatase E-1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1426640 6744343 HY04AAS1_1512 Hydrogenobaculum sp. Y04AAS1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_002122173.1 1425975 R 380749 CDS YP_002122174.1 195953884 6744344 complement(1426637..1427188) 1 NC_011126.1 PFAM: Acireductone dioxygenase ARD; KEGG: aae:aq_1975 hypothetical protein; Acireductone dioxygenase ARD 1427188 6744344 HY04AAS1_1513 Hydrogenobaculum sp. Y04AAS1 Acireductone dioxygenase ARD YP_002122174.1 1426637 R 380749 CDS YP_002122175.1 195953885 6744345 complement(1427185..1427796) 1 NC_011126.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: aae:aq_1979 hypothetical protein; methylthioribulose-1-phosphate dehydratase 1427796 6744345 HY04AAS1_1514 Hydrogenobaculum sp. Y04AAS1 methylthioribulose-1-phosphate dehydratase YP_002122175.1 1427185 R 380749 CDS YP_002122176.1 195953886 6744346 1427905..1428144 1 NC_011126.1 KEGG: tet:TTHERM_00163900 Bifunctional endo-1,4-beta-xylanase xylA precursor, PROSITE: ASN_RICH GLN_RICH; bifunctional endo-1,4-beta-xylanase xylA 1428144 6744346 HY04AAS1_1515 Hydrogenobaculum sp. Y04AAS1 bifunctional endo-1,4-beta-xylanase xylA YP_002122176.1 1427905 D 380749 CDS YP_002122177.1 195953887 6744347 1428151..1429386 1 NC_011126.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_2075 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoylalanine/D-glutamate ligase 1429386 6744347 HY04AAS1_1516 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylmuramoylalanine/D-glutamate ligase YP_002122177.1 1428151 D 380749 CDS YP_002122178.1 195953888 6744348 complement(1429390..1430571) 1 NC_011126.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sul:SYO3AOP1_1529 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1430571 6744348 HY04AAS1_1517 Hydrogenobaculum sp. Y04AAS1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002122178.1 1429390 R 380749 CDS YP_002122179.1 195953889 6744349 1430608..1432128 1 NC_011126.1 PFAM: glycosyl transferase family 39; KEGG: aae:aq_765 hypothetical protein; glycosyl transferase family 39 1432128 6744349 HY04AAS1_1518 Hydrogenobaculum sp. Y04AAS1 glycosyl transferase family 39 YP_002122179.1 1430608 D 380749 CDS YP_002122180.1 195953890 6744350 complement(1432130..1434778) 1 NC_011126.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aae:aq_050 hypothetical protein; surface antigen (D15) 1434778 6744350 HY04AAS1_1519 Hydrogenobaculum sp. Y04AAS1 surface antigen (D15) YP_002122180.1 1432130 R 380749 CDS YP_002122181.1 195953891 6744351 complement(1434800..1435726) 1 NC_011126.1 KEGG: aae:aq_1758 hypothetical protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1435726 6744351 HY04AAS1_1520 Hydrogenobaculum sp. Y04AAS1 RluA family pseudouridine synthase YP_002122181.1 1434800 R 380749 CDS YP_002122182.1 195953892 6744352 complement(1435701..1435868) 1 NC_011126.1 hypothetical protein 1435868 6744352 HY04AAS1_1521 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122182.1 1435701 R 380749 CDS YP_002122183.1 195953893 6744353 complement(1435865..1436116) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1735 hypothetical protein; hypothetical protein 1436116 6744353 HY04AAS1_1522 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122183.1 1435865 R 380749 CDS YP_002122184.1 195953894 6744354 complement(1436113..1436856) 1 NC_011126.1 KEGG: tte:TTE2487 phosphoglycerate mutase 1; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1 family 1436856 6744354 HY04AAS1_1523 Hydrogenobaculum sp. Y04AAS1 phosphoglycerate mutase 1 family YP_002122184.1 1436113 R 380749 CDS YP_002122185.1 195953895 6744355 complement(1436876..1437445) 1 NC_011126.1 PFAM: SirA family protein; KEGG: sul:SYO3AOP1_1311 SirA family protein; SirA family protein 1437445 6744355 HY04AAS1_1524 Hydrogenobaculum sp. Y04AAS1 SirA family protein YP_002122185.1 1436876 R 380749 CDS YP_002122186.1 195953896 6744356 complement(1437508..1438629) 1 NC_011126.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: aae:aq_815 pantothenate metabolism flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1438629 6744356 HY04AAS1_1525 Hydrogenobaculum sp. Y04AAS1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_002122186.1 1437508 R 380749 CDS YP_002122187.1 195953897 6744357 complement(1438651..1440324) 1 NC_011126.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: sul:SYO3AOP1_1718 transposase, IS605 OrfB family; transposase, IS605 OrfB family 1440324 6744357 HY04AAS1_1526 Hydrogenobaculum sp. Y04AAS1 transposase, IS605 OrfB family YP_002122187.1 1438651 R 380749 CDS YP_002122188.1 195953898 6744358 complement(1440455..1441903) 1 NC_011126.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: aae:aq_1474 general secretion pathway protein E; type II secretion system protein E 1441903 6744358 HY04AAS1_1527 Hydrogenobaculum sp. Y04AAS1 type II secretion system protein E YP_002122188.1 1440455 R 380749 CDS YP_002122189.1 195953899 6744359 complement(1441905..1442195) 1 NC_011126.1 PFAM: ferredoxin; KEGG: aae:aq_919a ferredoxin; ferredoxin 1442195 6744359 HY04AAS1_1528 Hydrogenobaculum sp. Y04AAS1 ferredoxin YP_002122189.1 1441905 R 380749 CDS YP_002122190.1 195953900 6744360 complement(1442210..1443055) 1 NC_011126.1 PFAM: peptidase M48 Ste24p; KEGG: aae:aq_1991 probable protease htpX homolog; peptidase M48 Ste24p 1443055 6744360 HY04AAS1_1529 Hydrogenobaculum sp. Y04AAS1 peptidase M48 Ste24p YP_002122190.1 1442210 R 380749 CDS YP_002122191.1 195953901 6744361 complement(1443052..1444788) 1 NC_011126.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: aae:aq_1490 RNA polymerase sigma factor; RpoD family RNA polymerase sigma-70 subunit 1444788 6744361 HY04AAS1_1530 Hydrogenobaculum sp. Y04AAS1 RpoD family RNA polymerase sigma-70 subunit YP_002122191.1 1443052 R 380749 CDS YP_002122192.1 195953902 6744362 complement(1444832..1446439) 1 NC_011126.1 KEGG: aae:aq_1493 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 1446439 6744362 HY04AAS1_1531 Hydrogenobaculum sp. Y04AAS1 DNA primase YP_002122192.1 1444832 R 380749 CDS YP_002122193.1 195953903 6744363 complement(1446485..1449253) 1 NC_011126.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: aae:aq_2011 hypothetical protein; ATPase 1449253 6744363 HY04AAS1_1532 Hydrogenobaculum sp. Y04AAS1 ATPase YP_002122193.1 1446485 R 380749 CDS YP_002122194.1 195953904 6744364 1449410..1449961 1 NC_011126.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: aae:aq_045 Rieske-I iron sulfur protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1449961 6744364 HY04AAS1_1533 Hydrogenobaculum sp. Y04AAS1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_002122194.1 1449410 D 380749 CDS YP_002122195.1 195953905 6744365 1449980..1451182 1 NC_011126.1 PFAM: cytochrome b/b6 domain; KEGG: aae:aq_044 ubiquinol-cytochrome c reductase cytochrome b subunit; cytochrome b/b6 domain 1451182 6744365 HY04AAS1_1534 Hydrogenobaculum sp. Y04AAS1 cytochrome b/b6 domain YP_002122195.1 1449980 D 380749 CDS YP_002122196.1 195953906 6744366 1451179..1451889 1 NC_011126.1 KEGG: aae:aq_042 ubiquinol-cytochrome c reductase cytochrome c1 subunit; ubiquinol-cytochrome c reductase cytochrome c1 subunit 1451889 6744366 HY04AAS1_1535 Hydrogenobaculum sp. Y04AAS1 ubiquinol-cytochrome c reductase cytochrome c1 subunit YP_002122196.1 1451179 D 380749 CDS YP_002122197.1 195953907 6744367 complement(1451996..1454566) 1 NC_011126.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1454566 alaS 6744367 alaS Hydrogenobaculum sp. Y04AAS1 alanyl-tRNA synthetase YP_002122197.1 1451996 R 380749 CDS YP_002122198.1 195953908 6744368 complement(1454598..1455425) 1 NC_011126.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: sul:SYO3AOP1_1531 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1455425 6744368 HY04AAS1_1537 Hydrogenobaculum sp. Y04AAS1 dTDP-4-dehydrorhamnose reductase YP_002122198.1 1454598 R 380749 CDS YP_002122199.1 195953909 6744369 complement(1455422..1456432) 1 NC_011126.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_1390 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1456432 6744369 HY04AAS1_1538 Hydrogenobaculum sp. Y04AAS1 dTDP-glucose 4,6-dehydratase YP_002122199.1 1455422 R 380749 CDS YP_002122200.1 195953910 6744370 complement(1456436..1457008) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1389 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1457008 6744370 HY04AAS1_1539 Hydrogenobaculum sp. Y04AAS1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002122200.1 1456436 R 380749 CDS YP_002122201.1 195953911 6744371 complement(1456998..1457882) 1 NC_011126.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sul:SYO3AOP1_1388 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1457882 6744371 HY04AAS1_1540 Hydrogenobaculum sp. Y04AAS1 glucose-1-phosphate thymidylyltransferase YP_002122201.1 1456998 R 380749 CDS YP_002122202.1 195953912 6744372 1457914..1458591 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2160 peptide transport system ATP-binding protein; ABC transporter 1458591 6744372 HY04AAS1_1541 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122202.1 1457914 D 380749 CDS YP_002122203.1 195953913 6744374 1459436..1460407 1 NC_011126.1 KEGG: sul:SYO3AOP1_1000 hypothetical protein; hypothetical protein 1460407 6744374 HY04AAS1_1543 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122203.1 1459436 D 380749 CDS YP_002122204.1 195953914 6744375 1460494..1461354 1 NC_011126.1 KEGG: cch:Cag_0368 hypothetical protein; hypothetical protein 1461354 6744375 HY04AAS1_1544 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122204.1 1460494 D 380749 CDS YP_002122205.1 195953915 6744376 1461877..1462077 1 NC_011126.1 KEGG: cyt:cce_4067 hypothetical protein; hypothetical protein 1462077 6744376 HY04AAS1_1545 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122205.1 1461877 D 380749 CDS YP_002122206.1 195953916 6744377 1462109..1462360 1 NC_011126.1 TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: syp:SYNPCC7002_A0836 addiction module toxin, Txe/YoeB family; Txe/YoeB family addiction module toxin 1462360 6744377 HY04AAS1_1546 Hydrogenobaculum sp. Y04AAS1 Txe/YoeB family addiction module toxin YP_002122206.1 1462109 D 380749 CDS YP_002122207.1 195953917 6744378 1462531..1462806 1 NC_011126.1 KEGG: sul:SYO3AOP1_1000 hypothetical protein; hypothetical protein 1462806 6744378 HY04AAS1_1547 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122207.1 1462531 D 380749 CDS YP_002122208.1 195953918 6744379 complement(1462910..1464445) 1 NC_011126.1 PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 1464445 6744379 HY04AAS1_1548 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122208.1 1462910 R 380749 CDS YP_002122209.1 195953919 6744380 1464543..1466546 1 NC_011126.1 PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1638 lipoate-protein ligase A; CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit 1466546 6744380 HY04AAS1_1549 Hydrogenobaculum sp. Y04AAS1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit YP_002122209.1 1464543 D 380749 CDS YP_002122210.1 195953920 6744381 complement(1466547..1467275) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cac:CAC2328 polysaccharide ABC transporter, ATPase component; ABC transporter 1467275 6744381 HY04AAS1_1550 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122210.1 1466547 R 380749 CDS YP_002122211.1 195953921 6744382 complement(1467272..1468069) 1 NC_011126.1 PFAM: ABC transporter; KEGG: mxa:MXAN_4623 O-antigen ABC exporter, permease protein; ABC transporter 1468069 6744382 HY04AAS1_1551 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122211.1 1467272 R 380749 CDS YP_002122212.1 195953922 6744383 complement(1468139..1469314) 1 NC_011126.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: aae:aq_1145 1,3 propanediol dehydrogenase; iron-containing alcohol dehydrogenase 1469314 6744383 HY04AAS1_1552 Hydrogenobaculum sp. Y04AAS1 iron-containing alcohol dehydrogenase YP_002122212.1 1468139 R 380749 CDS YP_002122213.1 195953923 6744384 complement(1469325..1470074) 1 NC_011126.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sul:SYO3AOP1_1239 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1470074 6744384 HY04AAS1_1553 Hydrogenobaculum sp. Y04AAS1 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002122213.1 1469325 R 380749 CDS YP_002122214.1 195953924 6744385 1470134..1470586 1 NC_011126.1 KEGG: sul:SYO3AOP1_0242 hypothetical protein; hypothetical protein 1470586 6744385 HY04AAS1_1554 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122214.1 1470134 D 380749 CDS YP_002122215.1 195953925 6744386 1470588..1471262 1 NC_011126.1 PFAM: alanine racemase domain protein; KEGG: aae:aq_274 hypothetical protein; alanine racemase domain-containing protein 1471262 6744386 HY04AAS1_1555 Hydrogenobaculum sp. Y04AAS1 alanine racemase domain-containing protein YP_002122215.1 1470588 D 380749 CDS YP_002122216.1 195953926 6744387 1471262..1472182 1 NC_011126.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: aae:aq_1887 cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase 1472182 6744387 HY04AAS1_1556 Hydrogenobaculum sp. Y04AAS1 tRNA(Ile)-lysidine synthetase YP_002122216.1 1471262 D 380749 CDS YP_002122217.1 195953927 6744388 1472213..1473091 1 NC_011126.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1473091 6744388 HY04AAS1_1557 Hydrogenobaculum sp. Y04AAS1 F0F1 ATP synthase subunit gamma YP_002122217.1 1472213 D 380749 CDS YP_002122218.1 195953928 6744389 1473142..1473561 1 NC_011126.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: aae:aq_2181 molybdopterin converting factor subunit 2; molybdopterin biosynthesis MoaE protein 1473561 6744389 HY04AAS1_1558 Hydrogenobaculum sp. Y04AAS1 molybdopterin biosynthesis MoaE protein YP_002122218.1 1473142 D 380749 CDS YP_002122219.1 195953929 6744390 1473530..1474513 1 NC_011126.1 PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sul:SYO3AOP1_0369 molybdenum cofactor biosynthesis protein A; Radical SAM domain-containing protein 1474513 6744390 HY04AAS1_1559 Hydrogenobaculum sp. Y04AAS1 Radical SAM domain-containing protein YP_002122219.1 1473530 D 380749 CDS YP_002122220.1 195953930 6744391 1474526..1475761 1 NC_011126.1 KEGG: aae:aq_474 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 1475761 6744391 HY04AAS1_1560 Hydrogenobaculum sp. Y04AAS1 MiaB-like tRNA modifying protein YP_002122220.1 1474526 D 380749 CDS YP_002122221.1 195953931 6744392 1475758..1476045 1 NC_011126.1 hypothetical protein 1476045 6744392 HY04AAS1_1561 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122221.1 1475758 D 380749 CDS YP_002122222.1 195953932 6744393 complement(1476047..1476685) 1 NC_011126.1 KEGG: sul:SYO3AOP1_0813 hypothetical protein; hypothetical protein 1476685 6744393 HY04AAS1_1562 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122222.1 1476047 R 380749 CDS YP_002122223.1 195953933 6744394 1476735..1478339 1 NC_011126.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1478339 pyrG 6744394 pyrG Hydrogenobaculum sp. Y04AAS1 CTP synthetase YP_002122223.1 1476735 D 380749 CDS YP_002122224.1 195953934 6744395 1478343..1479104 1 NC_011126.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aae:aq_2051 flagellar hook basal-body protein FlgG; flagellar basal body rod protein 1479104 6744395 HY04AAS1_1564 Hydrogenobaculum sp. Y04AAS1 flagellar basal body rod protein YP_002122224.1 1478343 D 380749 CDS YP_002122225.1 195953935 6744396 complement(1479108..1479977) 1 NC_011126.1 KEGG: aae:aq_539 protein; hypothetical protein 1479977 6744396 HY04AAS1_1565 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122225.1 1479108 R 380749 CDS YP_002122226.1 195953936 6744397 1480038..1480682 1 NC_011126.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 1480682 thiE 6744397 thiE Hydrogenobaculum sp. Y04AAS1 thiamine-phosphate pyrophosphorylase YP_002122226.1 1480038 D 380749 CDS YP_002122227.1 195953937 6744398 1480679..1481542 1 NC_011126.1 KEGG: sul:SYO3AOP1_0477 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1481542 6744398 HY04AAS1_1567 Hydrogenobaculum sp. Y04AAS1 5,10-methylenetetrahydrofolate reductase YP_002122227.1 1480679 D 380749 CDS YP_002122228.1 195953938 6744399 complement(1481544..1483820) 1 NC_011126.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aae:aq_1445 cation transporting ATPase (E1-E2 family); heavy metal translocating P-type ATPase 1483820 6744399 HY04AAS1_1568 Hydrogenobaculum sp. Y04AAS1 heavy metal translocating P-type ATPase YP_002122228.1 1481544 R 380749 CDS YP_002122229.1 195953939 6744400 complement(1483879..1484556) 1 NC_011126.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aae:aq_2160 peptide transport system ATP-binding protein; ABC transporter 1484556 6744400 HY04AAS1_1569 Hydrogenobaculum sp. Y04AAS1 ABC transporter YP_002122229.1 1483879 R 380749 CDS YP_002122230.1 195953940 6744401 1484588..1485472 1 NC_011126.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sul:SYO3AOP1_1388 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1485472 6744401 HY04AAS1_1570 Hydrogenobaculum sp. Y04AAS1 glucose-1-phosphate thymidylyltransferase YP_002122230.1 1484588 D 380749 CDS YP_002122231.1 195953941 6744402 1485462..1486034 1 NC_011126.1 KEGG: sul:SYO3AOP1_1389 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1486034 6744402 HY04AAS1_1571 Hydrogenobaculum sp. Y04AAS1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002122231.1 1485462 D 380749 CDS YP_002122232.1 195953942 6744403 1486038..1487030 1 NC_011126.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sul:SYO3AOP1_1390 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1487030 6744403 HY04AAS1_1572 Hydrogenobaculum sp. Y04AAS1 dTDP-glucose 4,6-dehydratase YP_002122232.1 1486038 D 380749 CDS YP_002122233.1 195953943 6744404 1487052..1488800 1 NC_011126.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1488800 6744404 HY04AAS1_1573 Hydrogenobaculum sp. Y04AAS1 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein YP_002122233.1 1487052 D 380749 CDS YP_002122234.1 195953944 6744406 1489061..1491301 1 NC_011126.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: glo:Glov_1528 hypothetical protein; type 12 methyltransferase 1491301 6744406 HY04AAS1_1575 Hydrogenobaculum sp. Y04AAS1 type 12 methyltransferase YP_002122234.1 1489061 D 380749 CDS YP_002122235.1 195953945 6744407 1491306..1493546 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: cbk:CLL_A3246 WsaE; family 2 glycosyl transferase 1493546 6744407 HY04AAS1_1576 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002122235.1 1491306 D 380749 CDS YP_002122236.1 195953946 6744408 1493550..1494497 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: pcu:pc0904 probable rhamnosyltransferase; family 2 glycosyl transferase 1494497 6744408 HY04AAS1_1577 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002122236.1 1493550 D 380749 CDS YP_002122237.1 195953947 6744409 1494494..1495411 1 NC_011126.1 PFAM: glycosyl transferase family 2; KEGG: apa:APP7_1479 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 1495411 6744409 HY04AAS1_1578 Hydrogenobaculum sp. Y04AAS1 family 2 glycosyl transferase YP_002122237.1 1494494 D 380749 CDS YP_002122238.1 195953948 6744411 complement(1495504..1495980) 1 NC_011126.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: aae:aq_185 glycerol-3-phosphate cytidyltransferase; rfaE bifunctional protein 1495980 6744411 HY04AAS1_1579 Hydrogenobaculum sp. Y04AAS1 rfaE bifunctional protein YP_002122238.1 1495504 R 380749 CDS YP_002122239.1 195953949 6744412 1496096..1497625 1 NC_011126.1 PFAM: protein of unknown function DUF1703; KEGG: sul:SYO3AOP1_0027 protein of unknown function DUF1703; hypothetical protein 1497625 6744412 HY04AAS1_1580 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122239.1 1496096 D 380749 CDS YP_002122240.1 195953950 6744413 1498104..1499183 1 NC_011126.1 KEGG: bpl:BURPS1106A_A1951 membrane-anchored cell surface protein; hypothetical protein 1499183 6744413 HY04AAS1_1581 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122240.1 1498104 D 380749 CDS YP_002122241.1 195953951 6744414 complement(1499253..1500272) 1 NC_011126.1 PFAM: phosphoesterase RecJ domain protein; KEGG: aae:aq_1630 hypothetical protein; phosphoesterase RecJ domain-containing protein 1500272 6744414 HY04AAS1_1582 Hydrogenobaculum sp. Y04AAS1 phosphoesterase RecJ domain-containing protein YP_002122241.1 1499253 R 380749 CDS YP_002122242.1 195953952 6744415 complement(1500292..1502709) 1 NC_011126.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1502709 6744415 HY04AAS1_1583 Hydrogenobaculum sp. Y04AAS1 phosphoenolpyruvate synthase YP_002122242.1 1500292 R 380749 CDS YP_002122243.1 195953953 6744416 complement(1502726..1504159) 1 NC_011126.1 PFAM: molydopterin dinucleotide-binding region; KEGG: aae:aq_116 hypothetical protein; molydopterin dinucleotide-binding region 1504159 6744416 HY04AAS1_1584 Hydrogenobaculum sp. Y04AAS1 molydopterin dinucleotide-binding region YP_002122243.1 1502726 R 380749 CDS YP_002122244.1 195953954 6744417 complement(1504168..1504950) 1 NC_011126.1 KEGG: aae:aq_1552 enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-(acyl-carrier-protein) reductase (NADH) 1504950 6744417 HY04AAS1_1585 Hydrogenobaculum sp. Y04AAS1 enoyl-(acyl-carrier-protein) reductase (NADH) YP_002122244.1 1504168 R 380749 CDS YP_002122245.1 195953955 6744418 complement(1504968..1505771) 1 NC_011126.1 catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate; fructose-bisphosphate aldolase 1505771 6744418 HY04AAS1_1586 Hydrogenobaculum sp. Y04AAS1 fructose-bisphosphate aldolase YP_002122245.1 1504968 R 380749 CDS YP_002122246.1 195953956 6744419 complement(1505773..1507773) 1 NC_011126.1 KEGG: aae:aq_2141 glycyl-tRNA synthetase beta chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit; glycyl-tRNA synthetase subunit beta 1507773 6744419 HY04AAS1_1587 Hydrogenobaculum sp. Y04AAS1 glycyl-tRNA synthetase subunit beta YP_002122246.1 1505773 R 380749 CDS YP_002122247.1 195953957 6744420 complement(1507770..1508618) 1 NC_011126.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1508618 glyQ 6744420 glyQ Hydrogenobaculum sp. Y04AAS1 glycyl-tRNA synthetase subunit alpha YP_002122247.1 1507770 R 380749 CDS YP_002122248.1 195953958 6744421 1508676..1508966 1 NC_011126.1 PFAM: DNA polymerase subunit beta; KEGG: aae:aq_507 hypothetical protein; DNA polymerase subunit beta 1508966 6744421 HY04AAS1_1589 Hydrogenobaculum sp. Y04AAS1 DNA polymerase subunit beta YP_002122248.1 1508676 D 380749 CDS YP_002122249.1 195953959 6744422 1508957..1509364 1 NC_011126.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: sul:SYO3AOP1_1773 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate binding protein 1509364 6744422 HY04AAS1_1590 Hydrogenobaculum sp. Y04AAS1 nucleotidyltransferase substrate binding protein YP_002122249.1 1508957 D 380749 CDS YP_002122250.1 195953960 6744423 complement(1509366..1510604) 1 NC_011126.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_2045 folylpolyglutamate synthase / dihydrofolate synthase; FolC bifunctional protein 1510604 6744423 HY04AAS1_1591 Hydrogenobaculum sp. Y04AAS1 FolC bifunctional protein YP_002122250.1 1509366 R 380749 CDS YP_002122251.1 195953961 6744424 complement(1510601..1512190) 1 NC_011126.1 KEGG: aae:aq_2158 poly A polymerase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 1512190 6744424 HY04AAS1_1592 Hydrogenobaculum sp. Y04AAS1 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_002122251.1 1510601 R 380749 CDS YP_002122252.1 195953962 6744425 complement(1512183..1512668) 1 NC_011126.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aae:aq_958 phosphotidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 1512668 6744425 HY04AAS1_1593 Hydrogenobaculum sp. Y04AAS1 CDP-alcohol phosphatidyltransferase YP_002122252.1 1512183 R 380749 CDS YP_002122253.1 195953963 6744426 1512703..1514097 1 NC_011126.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: aae:aq_1175 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1514097 6744426 HY04AAS1_1594 Hydrogenobaculum sp. Y04AAS1 amidophosphoribosyltransferase YP_002122253.1 1512703 D 380749 CDS YP_002122254.1 195953964 6744427 1514094..1514312 1 NC_011126.1 KEGG: mta:Moth_1699 hypothetical protein; hypothetical protein 1514312 6744427 HY04AAS1_1595 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122254.1 1514094 D 380749 CDS YP_002122255.1 195953965 6744428 1514338..1515414 1 NC_011126.1 PFAM: protein of unknown function DUF354; KEGG: cff:CFF8240_1618 hypothetical protein; hypothetical protein 1515414 6744428 HY04AAS1_1596 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122255.1 1514338 D 380749 CDS YP_002122256.1 195953966 6744429 1515416..1517338 1 NC_011126.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tdn:Tmden_0186 asparagine synthase, glutamine-hydrolyzing; asparagine synthase 1517338 6744429 HY04AAS1_1597 Hydrogenobaculum sp. Y04AAS1 asparagine synthase YP_002122256.1 1515416 D 380749 CDS YP_002122257.1 195953967 6744430 complement(1517327..1517644) 1 NC_011126.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: aae:aq_1005 periplasmic divalent cation tolerance protein; CutA1 divalent ion tolerance protein 1517644 6744430 HY04AAS1_1598 Hydrogenobaculum sp. Y04AAS1 CutA1 divalent ion tolerance protein YP_002122257.1 1517327 R 380749 CDS YP_002122258.1 195953968 6744431 1517677..1517970 1 NC_011126.1 hypothetical protein 1517970 6744431 HY04AAS1_1599 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122258.1 1517677 D 380749 CDS YP_002122259.1 195953969 6744432 1517971..1518117 1 NC_011126.1 hypothetical protein 1518117 6744432 HY04AAS1_1600 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122259.1 1517971 D 380749 CDS YP_002122260.1 195953970 6744433 1518265..1518711 1 NC_011126.1 KEGG: aae:aq_805 protein; hypothetical protein 1518711 6744433 HY04AAS1_1601 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122260.1 1518265 D 380749 CDS YP_002122261.1 195953971 6744434 1518708..1519925 1 NC_011126.1 PFAM: protein of unknown function DUF208; KEGG: aae:aq_701 hypothetical protein; hypothetical protein 1519925 6744434 HY04AAS1_1602 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122261.1 1518708 D 380749 CDS YP_002122262.1 195953972 6744435 1519873..1520670 1 NC_011126.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1520670 6744435 HY04AAS1_1603 Hydrogenobaculum sp. Y04AAS1 2-dehydro-3-deoxyphosphooctonate aldolase YP_002122262.1 1519873 D 380749 CDS YP_002122263.1 195953973 6744436 1520673..1521308 1 NC_011126.1 KEGG: aae:aq_581 protein; hypothetical protein 1521308 6744436 HY04AAS1_1604 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122263.1 1520673 D 380749 CDS YP_002122264.1 195953974 6744437 1521385..1522329 1 NC_011126.1 KEGG: sai:Saci_2119 hypothetical protein; hypothetical protein 1522329 6744437 HY04AAS1_1605 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122264.1 1521385 D 380749 CDS YP_002122265.1 195953975 6744438 complement(1522477..1523400) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1000 hypothetical protein; hypothetical protein 1523400 6744438 HY04AAS1_1606 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122265.1 1522477 R 380749 CDS YP_002122266.1 195953976 6744439 1523619..1524839 1 NC_011126.1 KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain; hypothetical protein 1524839 6744439 HY04AAS1_1607 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122266.1 1523619 D 380749 CDS YP_002122267.1 195953977 6744440 1524836..1525933 1 NC_011126.1 TIGRFAM: methyltransferase FkbM family; KEGG: cbk:CLL_A2331 methyltransferase; methyltransferase FkbM family 1525933 6744440 HY04AAS1_1608 Hydrogenobaculum sp. Y04AAS1 methyltransferase FkbM family YP_002122267.1 1524836 D 380749 CDS YP_002122268.1 195953978 6744441 complement(1525938..1527188) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain; hypothetical protein 1527188 6744441 HY04AAS1_1609 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122268.1 1525938 R 380749 CDS YP_002122269.1 195953979 6744442 complement(1527185..1528417) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1398 protein containing nucleotide-diphospho-sugar transferase domain; hypothetical protein 1528417 6744442 HY04AAS1_1610 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122269.1 1527185 R 380749 CDS YP_002122270.1 195953980 6744443 complement(1528434..1529375) 1 NC_011126.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pvi:Cvib_0628 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1529375 6744443 HY04AAS1_1611 Hydrogenobaculum sp. Y04AAS1 NAD-dependent epimerase/dehydratase YP_002122270.1 1528434 R 380749 CDS YP_002122271.1 195953981 6744444 1529552..1533157 1 NC_011126.1 KEGG: aae:aq_1008 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1533157 6744444 HY04AAS1_1612 Hydrogenobaculum sp. Y04AAS1 DNA polymerase III subunit alpha YP_002122271.1 1529552 D 380749 CDS YP_002122272.1 195953982 6744445 1533214..1534224 1 NC_011126.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sul:SYO3AOP1_0741 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter, periplasmic phosphate-binding protein 1534224 6744445 HY04AAS1_1613 Hydrogenobaculum sp. Y04AAS1 phosphate ABC transporter, periplasmic phosphate-binding protein YP_002122272.1 1533214 D 380749 CDS YP_002122273.1 195953983 6744446 1534243..1535238 1 NC_011126.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sul:SYO3AOP1_0742 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstC 1535238 6744446 HY04AAS1_1614 Hydrogenobaculum sp. Y04AAS1 phosphate ABC transporter, inner membrane subunit PstC YP_002122273.1 1534243 D 380749 CDS YP_002122274.1 195953984 6744447 1535226..1536122 1 NC_011126.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sul:SYO3AOP1_0743 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstA 1536122 6744447 HY04AAS1_1615 Hydrogenobaculum sp. Y04AAS1 phosphate ABC transporter, inner membrane subunit PstA YP_002122274.1 1535226 D 380749 CDS YP_002122275.1 195953985 6744448 1536139..1536921 1 NC_011126.1 KEGG: sul:SYO3AOP1_0744 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase; phosphate ABC transporter ATPase 1536921 6744448 HY04AAS1_1616 Hydrogenobaculum sp. Y04AAS1 phosphate ABC transporter ATPase YP_002122275.1 1536139 D 380749 CDS YP_002122276.1 195953986 6744449 1536952..1537551 1 NC_011126.1 PFAM: Phosphoglycerate mutase; KEGG: aae:aq_1744 phosphoglycerate mutase; Phosphoglycerate mutase 1537551 6744449 HY04AAS1_1617 Hydrogenobaculum sp. Y04AAS1 Phosphoglycerate mutase YP_002122276.1 1536952 D 380749 CDS YP_002122277.1 195953987 6744450 1537548..1537835 1 NC_011126.1 KEGG: pho:PH1355.1n hypothetical protein; hypothetical protein 1537835 6744450 HY04AAS1_1618 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122277.1 1537548 D 380749 CDS YP_002122278.1 195953988 6744451 1537839..1538270 1 NC_011126.1 PFAM: SNARE associated Golgi protein; KEGG: aae:aq_2066 hypothetical protein; hypothetical protein 1538270 6744451 HY04AAS1_1619 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122278.1 1537839 D 380749 CDS YP_002122279.1 195953989 6744452 complement(1538265..1539077) 1 NC_011126.1 PFAM: Prephenate dehydrogenase; KEGG: sul:SYO3AOP1_1358 prephenate dehydrogenase; Prephenate dehydrogenase 1539077 6744452 HY04AAS1_1620 Hydrogenobaculum sp. Y04AAS1 Prephenate dehydrogenase YP_002122279.1 1538265 R 380749 CDS YP_002122280.1 195953990 6744453 complement(1539078..1539896) 1 NC_011126.1 PFAM: UspA domain protein; KEGG: aae:aq_1024 hypothetical protein; UspA domain-containing protein 1539896 6744453 HY04AAS1_1621 Hydrogenobaculum sp. Y04AAS1 UspA domain-containing protein YP_002122280.1 1539078 R 380749 CDS YP_002122281.1 195953991 6744454 complement(1539889..1542249) 1 NC_011126.1 KEGG: aae:aq_1026 gyrase B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 1542249 6744454 HY04AAS1_1622 Hydrogenobaculum sp. Y04AAS1 DNA gyrase subunit B YP_002122281.1 1539889 R 380749 CDS YP_002122282.1 195953992 6744455 1542347..1544377 1 NC_011126.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sul:SYO3AOP1_0711 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1544377 6744455 HY04AAS1_1623 Hydrogenobaculum sp. Y04AAS1 heavy metal translocating P-type ATPase YP_002122282.1 1542347 D 380749 CDS YP_002122283.1 195953993 6744456 1544402..1544911 1 NC_011126.1 PFAM: protein of unknown function DUF996; KEGG: mja:MJ1644 hypothetical protein; hypothetical protein 1544911 6744456 HY04AAS1_1624 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122283.1 1544402 D 380749 CDS YP_002122284.1 195953994 6744457 complement(1544914..1545606) 1 NC_011126.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aae:aq_1111 hypothetical protein; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 1545606 6744457 HY04AAS1_1625 Hydrogenobaculum sp. Y04AAS1 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002122284.1 1544914 R 380749 CDS YP_002122285.1 195953995 6744458 1545655..1546119 1 NC_011126.1 PFAM: protein of unknown function DUF150; KEGG: aae:aq_260 hypothetical protein; hypothetical protein 1546119 6744458 HY04AAS1_1626 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122285.1 1545655 D 380749 CDS YP_002122286.1 195953996 6744459 1546113..1547081 1 NC_011126.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1547081 nusA 6744459 nusA Hydrogenobaculum sp. Y04AAS1 transcription elongation factor NusA YP_002122286.1 1546113 D 380749 CDS YP_002122287.1 195953997 6744460 1547081..1548328 1 NC_011126.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; KEGG: aae:aq_257 RNA methyltransferase; TrmA family RNA methyltransferase 1548328 6744460 HY04AAS1_1628 Hydrogenobaculum sp. Y04AAS1 TrmA family RNA methyltransferase YP_002122287.1 1547081 D 380749 CDS YP_002122288.1 195953998 6744461 1548325..1549590 1 NC_011126.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1549590 6744461 HY04AAS1_1629 Hydrogenobaculum sp. Y04AAS1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002122288.1 1548325 D 380749 CDS YP_002122289.1 195953999 6744462 complement(1549626..1550447) 1 NC_011126.1 KEGG: dol:Dole_0027 hypothetical protein; hypothetical protein 1550447 6744462 HY04AAS1_1630 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122289.1 1549626 R 380749 CDS YP_002122290.1 195954000 6744463 1550560..1551567 1 NC_011126.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pha:PSHAb0511 alcohol dehydrogenase, propanol-preferring; Alcohol dehydrogenase GroES domain-containing protein 1551567 6744463 HY04AAS1_1631 Hydrogenobaculum sp. Y04AAS1 Alcohol dehydrogenase GroES domain-containing protein YP_002122290.1 1550560 D 380749 CDS YP_002122291.1 195954001 6744464 1551578..1552012 1 NC_011126.1 KEGG: sul:SYO3AOP1_0325 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1552012 6744464 HY04AAS1_1632 Hydrogenobaculum sp. Y04AAS1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_002122291.1 1551578 D 380749 CDS YP_002122292.1 195954002 6744465 1552009..1553850 1 NC_011126.1 KEGG: aae:aq_1761 hypothetical protein; Primosomal protein N' 1553850 6744465 HY04AAS1_1633 Hydrogenobaculum sp. Y04AAS1 Primosomal protein N' YP_002122292.1 1552009 D 380749 CDS YP_002122293.1 195954003 6744466 1553918..1554487 1 NC_011126.1 PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: aae:aq_1192 hypothetical protein; CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit 1554487 6744466 HY04AAS1_1634 Hydrogenobaculum sp. Y04AAS1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit YP_002122293.1 1553918 D 380749 CDS YP_002122294.1 195954004 6744467 1554502..1555707 1 NC_011126.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: aae:aq_1195 pyruvate ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1555707 6744467 HY04AAS1_1635 Hydrogenobaculum sp. Y04AAS1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002122294.1 1554502 D 380749 CDS YP_002122295.1 195954005 6744468 1555697..1556557 1 NC_011126.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: aae:aq_1196 pyruvate ferredoxin oxidoreductase, beta subunit; thiamine pyrophosphate TPP binding domain-containing protein 1556557 6744468 HY04AAS1_1636 Hydrogenobaculum sp. Y04AAS1 thiamine pyrophosphate TPP binding domain-containing protein YP_002122295.1 1555697 D 380749 CDS YP_002122296.1 195954006 6744469 1556554..1557294 1 NC_011126.1 TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: aae:aq_1200 pyruvate ferredoxin oxidoreductase, gamma subunit; pyruvate/ketoisovalerate oxidoreductase subunit gamma 1557294 6744469 HY04AAS1_1637 Hydrogenobaculum sp. Y04AAS1 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_002122296.1 1556554 D 380749 CDS YP_002122297.1 195954007 6744470 complement(1557330..1558379) 1 NC_011126.1 KEGG: sul:SYO3AOP1_1442 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1558379 6744470 HY04AAS1_1638 Hydrogenobaculum sp. Y04AAS1 oxygen-independent coproporphyrinogen III oxidase YP_002122297.1 1557330 R 380749 CDS YP_002122298.1 195954008 6744471 complement(1558367..1558699) 1 NC_011126.1 PFAM: protein of unknown function UPF0102; KEGG: sul:SYO3AOP1_0546 protein of unknown function UPF0102; hypothetical protein 1558699 6744471 HY04AAS1_1639 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122298.1 1558367 R 380749 CDS YP_002122299.1 195954009 6744472 complement(1558696..1559430) 1 NC_011126.1 PFAM: protein of unknown function DUF62; KEGG: aae:aq_2196 hypothetical protein; hypothetical protein 1559430 6744472 HY04AAS1_1640 Hydrogenobaculum sp. Y04AAS1 hypothetical protein YP_002122299.1 1558696 R 380749 CDS