-- dump date 20140619_114258 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1055530000001 SEQ_END SEQ_END NC_017376.1 1607577 1607577 DR NC_017376.1; contig end 1607577..1607577 Helicobacter pylori SNT49 1055530000002 SEQ_END SEQ_END NC_017380.1 3253 3253 DR NC_017380.1; contig end 3253..3253 Helicobacter pylori SNT49 YP_005786177.1 CDS nusB NC_017376.1 11 427 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(11..427) Helicobacter pylori SNT49 12367612 YP_005786178.1 CDS ribH NC_017376.1 429 899 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(429..899) Helicobacter pylori SNT49 12367614 YP_005786179.1 CDS HPSNT_00015 NC_017376.1 909 1739 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(909..1739) Helicobacter pylori SNT49 12367616 YP_005786180.1 CDS HPSNT_00020 NC_017376.1 1726 2391 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(1726..2391) Helicobacter pylori SNT49 12367618 YP_005786181.1 CDS HPSNT_00025 NC_017376.1 2514 3197 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2514..3197 Helicobacter pylori SNT49 12367625 YP_005786182.1 CDS panC NC_017376.1 3198 4028 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 3198..4028 Helicobacter pylori SNT49 12367627 YP_005786183.1 CDS HPSNT_00035 NC_017376.1 5234 7237 R outer membrane protein HopZ complement(5234..7237) Helicobacter pylori SNT49 12366442 YP_005786184.1 CDS groEL NC_017376.1 7654 9294 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(7654..9294) Helicobacter pylori SNT49 12366443 YP_005786185.1 CDS groES NC_017376.1 9321 9677 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(9321..9677) Helicobacter pylori SNT49 12366444 YP_005786186.1 CDS dnaG NC_017376.1 9951 11630 D COG0358 DNA primase (bacterial type); DNA primase 9951..11630 Helicobacter pylori SNT49 12366445 YP_005786187.1 CDS HPSNT_00055 NC_017376.1 11627 12679 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; hypothetical protein 11627..12679 Helicobacter pylori SNT49 12366446 YP_005786188.1 CDS HPSNT_00060 NC_017376.1 12771 13598 D hypothetical protein 12771..13598 Helicobacter pylori SNT49 12366447 YP_005786189.1 CDS HPSNT_00065 NC_017376.1 13744 14025 D ComB2 competence protein 13744..14025 Helicobacter pylori SNT49 12366448 YP_005786190.1 CDS HPSNT_00070 NC_017376.1 14025 14288 D ComB3 competence protein 14025..14288 Helicobacter pylori SNT49 12366449 YP_005786191.1 CDS HPSNT_00075 NC_017376.1 14290 16653 D COG3451 Type IV secretory pathway, VirB4 components; type IV secretion system protein VirB4 14290..16653 Helicobacter pylori SNT49 12366450 YP_005786192.1 CDS HPSNT_00080 NC_017376.1 16974 18314 D COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 16974..18314 Helicobacter pylori SNT49 12366451 YP_005786193.1 CDS HPSNT_00085 NC_017376.1 18414 19379 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein (cheV) 18414..19379 Helicobacter pylori SNT49 12366452 YP_005786194.1 CDS HPSNT_00090 NC_017376.1 19376 20593 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 19376..20593 Helicobacter pylori SNT49 12366453 YP_005786195.1 CDS HPSNT_00095 NC_017376.1 20603 21175 R COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase complement(20603..21175) Helicobacter pylori SNT49 12366454 YP_005786196.1 CDS HPSNT_00100 NC_017376.1 21186 22751 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase complement(21186..22751) Helicobacter pylori SNT49 12366455 YP_005786197.1 CDS HPSNT_00105 NC_017376.1 22840 22983 R hypothetical protein complement(22840..22983) Helicobacter pylori SNT49 12366456 YP_005786198.1 CDS HPSNT_00110 NC_017376.1 23140 25209 R outer membrane protein HopD complement(23140..25209) Helicobacter pylori SNT49 12366457 YP_005786199.1 CDS gltA NC_017376.1 25730 27010 R COG0372 Citrate synthase; type II citrate synthase complement(25730..27010) Helicobacter pylori SNT49 12366458 YP_005786200.1 CDS HPSNT_00120 NC_017376.1 27210 28487 D COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 27210..28487 Helicobacter pylori SNT49 12366459 YP_005786201.1 CDS HPSNT_00125 NC_017376.1 28559 29086 D hypothetical protein 28559..29086 Helicobacter pylori SNT49 12366460 YP_005786202.1 CDS HPSNT_00130 NC_017376.1 29063 29719 R COG0132 Dethiobiotin synthetase; dethiobiotin synthetase complement(29063..29719) Helicobacter pylori SNT49 12366461 YP_005786203.1 CDS HPSNT_00145 NC_017376.1 31470 31883 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 31470..31883 Helicobacter pylori SNT49 12366462 YP_005786204.1 CDS HPSNT_00150 NC_017376.1 31906 32181 D COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein ClpS 31906..32181 Helicobacter pylori SNT49 12366463 YP_005786205.1 CDS HPSNT_00155 NC_017376.1 32181 34406 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease 32181..34406 Helicobacter pylori SNT49 12366464 YP_005786206.1 CDS HPSNT_00160 NC_017376.1 34396 34749 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 34396..34749 Helicobacter pylori SNT49 12366465 YP_005786207.1 CDS HPSNT_00165 NC_017376.1 34752 35045 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 34752..35045 Helicobacter pylori SNT49 12366466 YP_005786208.1 CDS HPSNT_00170 NC_017376.1 35045 36049 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; hypothetical protein 35045..36049 Helicobacter pylori SNT49 12366467 YP_005786209.1 CDS HPSNT_00175 NC_017376.1 36057 37112 D NADH-ubiquinone oxidoreductase subunit 36057..37112 Helicobacter pylori SNT49 12366468 YP_005786210.1 CDS HPSNT_00180 NC_017376.1 37128 37241 D Comb7 competence protein 37128..37241 Helicobacter pylori SNT49 12366469 YP_005786211.1 CDS HPSNT_00185 NC_017376.1 37238 37981 D COG3736 Type IV secretory pathway, component VirB8; comB8 competence protein 37238..37981 Helicobacter pylori SNT49 12366470 YP_005786212.1 CDS HPSNT_00190 NC_017376.1 37981 38952 D COG3504 Type IV secretory pathway, VirB9 components; comB9 competence protein 37981..38952 Helicobacter pylori SNT49 12366471 YP_005786213.1 CDS HPSNT_00195 NC_017376.1 38945 40075 D COG2948 Type IV secretory pathway, VirB10 components; comB10 competence protein 38945..40075 Helicobacter pylori SNT49 12366472 YP_005786214.1 CDS HPSNT_00200 NC_017376.1 40145 41557 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 40145..41557 Helicobacter pylori SNT49 12366473 YP_005786215.1 CDS HPSNT_00205 NC_017376.1 41587 42732 D COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 41587..42732 Helicobacter pylori SNT49 12366474 YP_005786216.1 CDS HPSNT_00210 NC_017376.1 42725 43657 D COG0451 Nucleoside-diphosphate-sugar epimerases; nodulation protein (nolK) 42725..43657 Helicobacter pylori SNT49 12366475 YP_005786217.1 CDS HPSNT_00215 NC_017376.1 44221 45219 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(44221..45219) Helicobacter pylori SNT49 12366476 YP_005786218.1 CDS HPSNT_00220 NC_017376.1 45231 47483 R COG0068 Hydrogenase maturation factor; transcriptional regulator (hypF) complement(45231..47483) Helicobacter pylori SNT49 12366477 YP_005786219.1 CDS HPSNT_00225 NC_017376.1 47480 48472 R COG2957 Peptidylarginine deiminase and related enzymes; hypothetical protein complement(47480..48472) Helicobacter pylori SNT49 12366478 YP_005786220.1 CDS HPSNT_00230 NC_017376.1 48524 49222 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase (putative type II) complement(48524..49222) Helicobacter pylori SNT49 12366479 YP_005786221.1 CDS HPSNT_00235 NC_017376.1 49219 49734 R COG0270 Site-specific DNA methylase; cytosine specific DNA methyltransferase complement(49219..49734) Helicobacter pylori SNT49 12366480 YP_005786222.1 CDS HPSNT_00240 NC_017376.1 49824 51314 R COG0591 Na+/proline symporter; sodium/proline symporter complement(49824..51314) Helicobacter pylori SNT49 12366481 YP_005786223.1 CDS HPSNT_00245 NC_017376.1 51341 54898 R COG0506 Proline dehydrogenase; Proline/pyrroline-5-carboxylate dehydrogenase complement(51341..54898) Helicobacter pylori SNT49 12366482 YP_005786224.1 CDS HPSNT_00250 NC_017376.1 55228 55437 D hypothetical protein 55228..55437 Helicobacter pylori SNT49 12366483 YP_005786225.1 CDS HPSNT_00255 NC_017376.1 55550 55648 D hypothetical protein 55550..55648 Helicobacter pylori SNT49 12366484 YP_005786226.1 CDS HPSNT_00260 NC_017376.1 55814 55933 D hypothetical protein 55814..55933 Helicobacter pylori SNT49 12366485 YP_005786227.1 CDS HPSNT_00265 NC_017376.1 56001 56234 R hypothetical protein complement(56001..56234) Helicobacter pylori SNT49 12366486 YP_005786228.1 CDS HPSNT_00290 NC_017376.1 58783 58890 D hypothetical protein 58783..58890 Helicobacter pylori SNT49 12366487 YP_005786229.1 CDS HPSNT_00295 NC_017376.1 58912 59298 D hypothetical protein 58912..59298 Helicobacter pylori SNT49 12366488 YP_005786230.1 CDS HPSNT_00300 NC_017376.1 59314 59574 D hypothetical protein 59314..59574 Helicobacter pylori SNT49 12366489 YP_005786231.1 CDS HPSNT_00305 NC_017376.1 59656 60987 D hypothetical protein 59656..60987 Helicobacter pylori SNT49 12366490 YP_005786232.1 CDS HPSNT_00310 NC_017376.1 61056 61271 D hypothetical protein 61056..61271 Helicobacter pylori SNT49 12366491 YP_005786233.1 CDS HPSNT_00325 NC_017376.1 62221 62580 D COG0582 Integrase; integrase-recombinase protein 62221..62580 Helicobacter pylori SNT49 12366492 YP_005786234.1 CDS HPSNT_00330 NC_017376.1 62643 63848 R hypothetical protein complement(62643..63848) Helicobacter pylori SNT49 12366493 YP_005786235.1 CDS HPSNT_00335 NC_017376.1 63848 65233 R hypothetical protein complement(63848..65233) Helicobacter pylori SNT49 12366494 YP_005786236.1 CDS HPSNT_00350 NC_017376.1 67475 68869 R hypothetical protein complement(67475..68869) Helicobacter pylori SNT49 12366495 YP_005786237.1 CDS HPSNT_00355 NC_017376.1 68870 69907 R hypothetical protein complement(68870..69907) Helicobacter pylori SNT49 12366496 YP_005786238.1 CDS HPSNT_00360 NC_017376.1 70062 78488 D COG0827 Adenine-specific DNA methylase; DNA methylase 70062..78488 Helicobacter pylori SNT49 12366497 YP_005786239.1 CDS HPSNT_00365 NC_017376.1 78755 79411 D COG1192 ATPases involved in chromosome partitioning; putative chromosome partitioning protein 78755..79411 Helicobacter pylori SNT49 12366498 YP_005786240.1 CDS HPSNT_00370 NC_017376.1 79493 79777 D hypothetical protein 79493..79777 Helicobacter pylori SNT49 12366499 YP_005786241.1 CDS HPSNT_00375 NC_017376.1 79809 80996 D hypothetical protein 79809..80996 Helicobacter pylori SNT49 12366500 YP_005786242.1 CDS HPSNT_00380 NC_017376.1 81021 82931 R COG3843 Type IV secretory pathway, VirD2 components (relaxase); relaxase complement(81021..82931) Helicobacter pylori SNT49 12366501 YP_005786243.1 CDS HPSNT_00385 NC_017376.1 83227 83541 D hypothetical protein 83227..83541 Helicobacter pylori SNT49 12366502 YP_005786244.1 CDS HPSNT_00390 NC_017376.1 83534 83815 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 83534..83815 Helicobacter pylori SNT49 12366503 YP_005786245.1 CDS HPSNT_00395 NC_017376.1 84137 85864 R COG3505 Type IV secretory pathway, VirD4 components; conjugal transfer protein (traG) complement(84137..85864) Helicobacter pylori SNT49 12366504 YP_005786246.1 CDS HPSNT_00400 NC_017376.1 85865 86422 R hypothetical protein complement(85865..86422) Helicobacter pylori SNT49 12366505 YP_005786247.1 CDS HPSNT_00405 NC_017376.1 86423 86713 R hypothetical protein complement(86423..86713) Helicobacter pylori SNT49 12366506 YP_005786248.1 CDS HPSNT_00410 NC_017376.1 86710 87165 R hypothetical protein complement(86710..87165) Helicobacter pylori SNT49 12366507 YP_005786249.1 CDS HPSNT_00415 NC_017376.1 87162 88103 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 type IV secretion ATPase complement(87162..88103) Helicobacter pylori SNT49 12366508 YP_005786250.1 CDS HPSNT_00420 NC_017376.1 88093 88398 R hypothetical protein complement(88093..88398) Helicobacter pylori SNT49 12366509 YP_005786251.1 CDS HPSNT_00425 NC_017376.1 88395 88658 R hypothetical protein complement(88395..88658) Helicobacter pylori SNT49 12366510 YP_005786252.1 CDS HPSNT_00430 NC_017376.1 88651 88944 R hypothetical protein complement(88651..88944) Helicobacter pylori SNT49 12366511 YP_005786253.1 CDS HPSNT_00435 NC_017376.1 89014 90249 R COG2948 Type IV secretory pathway, VirB10 components; competence protein complement(89014..90249) Helicobacter pylori SNT49 12366512 YP_005786254.1 CDS HPSNT_00440 NC_017376.1 90246 91787 R COG3504 Type IV secretory pathway, VirB9 components; conjugal plasmid transfer system protein complement(90246..91787) Helicobacter pylori SNT49 12366513 YP_005786255.1 CDS HPSNT_00445 NC_017376.1 91787 92773 R COG3736 Type IV secretory pathway, component VirB8; hypothetical protein complement(91787..92773) Helicobacter pylori SNT49 12366514 YP_005786256.1 CDS HPSNT_00450 NC_017376.1 92775 92903 R hypothetical protein complement(92775..92903) Helicobacter pylori SNT49 12366515 YP_005786257.1 CDS HPSNT_00465 NC_017376.1 94832 97330 R COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein complement(94832..97330) Helicobacter pylori SNT49 12366516 YP_005786258.1 CDS HPSNT_00470 NC_017376.1 97343 97603 R hypothetical protein complement(97343..97603) Helicobacter pylori SNT49 12366517 YP_005786259.1 CDS HPSNT_00475 NC_017376.1 97604 97906 R hypothetical protein complement(97604..97906) Helicobacter pylori SNT49 12366518 YP_005786260.1 CDS HPSNT_00480 NC_017376.1 97896 99812 R hypothetical protein complement(97896..99812) Helicobacter pylori SNT49 12366519 YP_005786261.1 CDS HPSNT_00485 NC_017376.1 99823 100587 R hypothetical protein complement(99823..100587) Helicobacter pylori SNT49 12366520 YP_005786262.1 CDS HPSNT_00490 NC_017376.1 100814 101161 D hypothetical protein 100814..101161 Helicobacter pylori SNT49 12366521 YP_005786263.1 CDS HPSNT_00510 NC_017376.1 103412 104209 R COG0829 Urease accessory protein UreH; urease accessory protein complement(103412..104209) Helicobacter pylori SNT49 12366522 YP_005786264.1 CDS HPSNT_00515 NC_017376.1 104209 104808 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein UreG complement(104209..104808) Helicobacter pylori SNT49 12366523 YP_005786265.1 CDS HPSNT_00520 NC_017376.1 104837 105601 R COG0830 Urease accessory protein UreF; urease accessory protein UreF complement(104837..105601) Helicobacter pylori SNT49 12366524 YP_005786266.1 CDS ureE NC_017376.1 105613 106125 R COG2371 Urease accessory protein UreE; urease accessory protein UreE complement(105613..106125) Helicobacter pylori SNT49 12366525 YP_005786267.1 CDS HPSNT_00530 NC_017376.1 106127 106714 R COG1138 Cytochrome c biogenesis factor; urease accessory protein / pH-dependent urea-transporter complement(106127..106714) Helicobacter pylori SNT49 12366526 YP_005786268.1 CDS ureB NC_017376.1 106908 108617 R COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta complement(106908..108617) Helicobacter pylori SNT49 12366527 YP_005786269.1 CDS HPSNT_00540 NC_017376.1 108621 109337 R COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha complement(108621..109337) Helicobacter pylori SNT49 12366528 YP_005786270.1 CDS lspA NC_017376.1 109682 110155 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(109682..110155) Helicobacter pylori SNT49 12366530 YP_005786271.1 CDS glmM NC_017376.1 110149 111486 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(110149..111486) Helicobacter pylori SNT49 12366531 YP_005786272.1 CDS rpsT NC_017376.1 111576 111845 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 111576..111845 Helicobacter pylori SNT49 12366532 YP_005786273.1 CDS prfA NC_017376.1 111971 113029 D COG0216 Protein chain release factor A; peptide chain release factor 1 111971..113029 Helicobacter pylori SNT49 12366533 YP_005786274.1 CDS HPSNT_00565 NC_017376.1 113454 113711 D hypothetical protein 113454..113711 Helicobacter pylori SNT49 12366534 YP_005786275.1 CDS HPSNT_00570 NC_017376.1 113722 115104 D outer membrane protein HorA 113722..115104 Helicobacter pylori SNT49 12366535 YP_005786276.1 CDS HPSNT_00575 NC_017376.1 115352 117130 D hypothetical protein 115352..117130 Helicobacter pylori SNT49 12366536 YP_005786277.1 CDS HPSNT_00580 NC_017376.1 117406 119427 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(117406..119427) Helicobacter pylori SNT49 12366537 YP_005786278.1 CDS rpsI NC_017376.1 119678 120067 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(119678..120067) Helicobacter pylori SNT49 12366538 YP_005786279.1 CDS rplM NC_017376.1 120064 120489 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(120064..120489) Helicobacter pylori SNT49 12366539 YP_005786280.1 CDS HPSNT_00595 NC_017376.1 120685 120873 R hypothetical protein complement(120685..120873) Helicobacter pylori SNT49 12366540 YP_005786281.1 CDS HPSNT_00600 NC_017376.1 120880 122232 R COG0579 Predicted dehydrogenase; hypothetical protein complement(120880..122232) Helicobacter pylori SNT49 12366541 YP_005786282.1 CDS HPSNT_00605 NC_017376.1 122286 123659 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(122286..123659) Helicobacter pylori SNT49 12366542 YP_005786283.1 CDS HPSNT_00610 NC_017376.1 123680 125692 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(123680..125692) Helicobacter pylori SNT49 12366543 YP_005786284.1 CDS HPSNT_00615 NC_017376.1 125888 126583 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(125888..126583) Helicobacter pylori SNT49 12366544 YP_005786285.1 CDS HPSNT_00620 NC_017376.1 126594 127523 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(126594..127523) Helicobacter pylori SNT49 12366545 YP_005786286.1 CDS HPSNT_00630 NC_017376.1 127962 128984 D COG2958 Uncharacterized protein conserved in bacteria; HrgA protein 127962..128984 Helicobacter pylori SNT49 12366547 YP_005786287.1 CDS HPSNT_00635 NC_017376.1 128988 129821 D COG0863 DNA modification methylase; type II restriction enzyme M protein (hsdM) 128988..129821 Helicobacter pylori SNT49 12366548 YP_005786288.1 CDS HPSNT_00650 NC_017376.1 130845 131375 R hypothetical protein complement(130845..131375) Helicobacter pylori SNT49 12366549 YP_005786289.1 CDS HPSNT_00655 NC_017376.1 131448 132392 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 131448..132392 Helicobacter pylori SNT49 12366550 YP_005786290.1 CDS HPSNT_00660 NC_017376.1 132542 133255 R hypothetical protein complement(132542..133255) Helicobacter pylori SNT49 12366551 YP_005786291.1 CDS HPSNT_00665 NC_017376.1 133362 134822 R COG0498 Threonine synthase; threonine synthase complement(133362..134822) Helicobacter pylori SNT49 12366552 YP_005786292.1 CDS HPSNT_00670 NC_017376.1 135029 137056 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 135029..137056 Helicobacter pylori SNT49 12366553 YP_005786293.1 CDS HPSNT_00675 NC_017376.1 137056 138162 D COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 137056..138162 Helicobacter pylori SNT49 12366554 YP_005786294.1 CDS HPSNT_00680 NC_017376.1 138281 139042 D hypothetical protein 138281..139042 Helicobacter pylori SNT49 12366555 YP_005786295.1 CDS HPSNT_00685 NC_017376.1 139025 139807 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase complement(139025..139807) Helicobacter pylori SNT49 12366556 YP_005786296.1 CDS HPSNT_00690 NC_017376.1 139839 141536 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (tlpB) complement(139839..141536) Helicobacter pylori SNT49 12366557 YP_005786297.1 CDS HPSNT_00695 NC_017376.1 141751 143496 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(141751..143496) Helicobacter pylori SNT49 12366558 YP_005786298.1 CDS HPSNT_00700 NC_017376.1 143638 144105 R COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase complement(143638..144105) Helicobacter pylori SNT49 12366559 YP_005786299.1 CDS HPSNT_00705 NC_017376.1 144140 145282 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(144140..145282) Helicobacter pylori SNT49 12366560 YP_005786300.1 CDS HPSNT_00710 NC_017376.1 145303 146220 R COG0031 Cysteine synthase; cysteine synthase B complement(145303..146220) Helicobacter pylori SNT49 12366561 YP_005786301.1 CDS HPSNT_00715 NC_017376.1 146383 146913 D hypothetical protein 146383..146913 Helicobacter pylori SNT49 12366562 YP_005786302.1 CDS dnaK NC_017376.1 147051 148913 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(147051..148913) Helicobacter pylori SNT49 12366563 YP_005786303.1 CDS HPSNT_00725 NC_017376.1 148945 149520 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(148945..149520) Helicobacter pylori SNT49 12366564 YP_005786304.1 CDS HPSNT_00730 NC_017376.1 149520 150350 R COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor complement(149520..150350) Helicobacter pylori SNT49 12366565 YP_005786305.1 CDS HPSNT_00735 NC_017376.1 150561 151199 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 150561..151199 Helicobacter pylori SNT49 12366566 YP_005786306.1 CDS HPSNT_00740 NC_017376.1 151220 151516 D hypothetical protein 151220..151516 Helicobacter pylori SNT49 12366567 YP_005786307.1 CDS HPSNT_00745 NC_017376.1 151525 153408 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(151525..153408) Helicobacter pylori SNT49 12366568 YP_005786308.1 CDS HPSNT_00750 NC_017376.1 153471 155015 R COG1344 Flagellin and related hook-associated proteins; flagellin B complement(153471..155015) Helicobacter pylori SNT49 12366569 YP_005786309.1 CDS HPSNT_00755 NC_017376.1 155182 157392 D COG0550 Topoisomerase IA; DNA topoisomerase I 155182..157392 Helicobacter pylori SNT49 12366570 YP_005786310.1 CDS HPSNT_00760 NC_017376.1 157385 158311 D COG0731 Fe-S oxidoreductases; hypothetical protein 157385..158311 Helicobacter pylori SNT49 12366571 YP_005786311.1 CDS HPSNT_00765 NC_017376.1 158386 159657 R hypothetical protein complement(158386..159657) Helicobacter pylori SNT49 12366572 YP_005786312.1 CDS HPSNT_00770 NC_017376.1 159757 162195 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(159757..162195) Helicobacter pylori SNT49 12366573 YP_005786313.1 CDS thrS NC_017376.1 162551 164389 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 162551..164389 Helicobacter pylori SNT49 12366574 YP_005786314.1 CDS infC NC_017376.1 164386 164997 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 164386..164997 Helicobacter pylori SNT49 12366575 YP_005786315.1 CDS rpmI NC_017376.1 164978 165172 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 164978..165172 Helicobacter pylori SNT49 12366576 YP_005786316.1 CDS rplT NC_017376.1 165268 165618 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 165268..165618 Helicobacter pylori SNT49 12366577 YP_005786317.1 CDS HPSNT_00795 NC_017376.1 165818 166678 D outer membrane protein HorB 165818..166678 Helicobacter pylori SNT49 12366578 YP_005786318.1 CDS HPSNT_00800 NC_017376.1 167031 167456 D hypothetical protein 167031..167456 Helicobacter pylori SNT49 12366579 YP_005786319.1 CDS HPSNT_00805 NC_017376.1 167874 168734 D hypothetical protein 167874..168734 Helicobacter pylori SNT49 12366580 YP_005786320.1 CDS HPSNT_00810 NC_017376.1 168802 168969 R hypothetical protein complement(168802..168969) Helicobacter pylori SNT49 12366581 YP_005786321.1 CDS HPSNT_00815 NC_017376.1 169357 170724 R COG1760 L-serine deaminase; L-serine deaminase complement(169357..170724) Helicobacter pylori SNT49 12366582 YP_005786322.1 CDS HPSNT_00820 NC_017376.1 170724 171965 R COG0814 Amino acid permeases; hypothetical protein complement(170724..171965) Helicobacter pylori SNT49 12366583 YP_005786323.1 CDS HPSNT_00825 NC_017376.1 172146 173495 D COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 172146..173495 Helicobacter pylori SNT49 12366584 YP_005786324.1 CDS HPSNT_00830 NC_017376.1 173574 173708 D hypothetical protein 173574..173708 Helicobacter pylori SNT49 12366585 YP_005786325.1 CDS HPSNT_00835 NC_017376.1 173767 173928 D hypothetical protein 173767..173928 Helicobacter pylori SNT49 12366586 YP_005786326.1 CDS HPSNT_00840 NC_017376.1 173937 174395 R COG1225 Peroxiredoxin; bacterioferritin comigratory protein complement(173937..174395) Helicobacter pylori SNT49 12366587 YP_005786327.1 CDS HPSNT_00845 NC_017376.1 174405 175040 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(174405..175040) Helicobacter pylori SNT49 12366588 YP_005786328.1 CDS HPSNT_00850 NC_017376.1 175033 176478 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein complement(175033..176478) Helicobacter pylori SNT49 12366589 YP_005786329.1 CDS HPSNT_00855 NC_017376.1 176507 177235 R COG0247 Fe-S oxidoreductase; Fe-S oxidoreductase complement(176507..177235) Helicobacter pylori SNT49 12366590 YP_005786330.1 CDS HPSNT_00860 NC_017376.1 177471 179120 D COG1620 L-lactate permease; L-lactate permease 177471..179120 Helicobacter pylori SNT49 12366591 YP_005786331.1 CDS HPSNT_00865 NC_017376.1 179169 180824 D COG1620 L-lactate permease; L-lactate permease, LctP family; membrane protein 179169..180824 Helicobacter pylori SNT49 12366592 YP_005786332.1 CDS HPSNT_00870 NC_017376.1 180848 181717 R COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY complement(180848..181717) Helicobacter pylori SNT49 12366593 YP_005786333.1 CDS HPSNT_00875 NC_017376.1 181835 183283 R COG0471 Di- and tricarboxylate transporters; hypothetical protein complement(181835..183283) Helicobacter pylori SNT49 12366594 YP_005786334.1 CDS HPSNT_00880 NC_017376.1 183453 184919 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 183453..184919 Helicobacter pylori SNT49 12366595 YP_005786335.1 CDS HPSNT_00885 NC_017376.1 184932 185630 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 184932..185630 Helicobacter pylori SNT49 12366596 YP_005786336.1 CDS HPSNT_00890 NC_017376.1 185641 185859 D cytochrome c oxidase, cbb3-type, CcoQ subunit 185641..185859 Helicobacter pylori SNT49 12366597 YP_005786337.1 CDS HPSNT_00895 NC_017376.1 185861 186739 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 185861..186739 Helicobacter pylori SNT49 12366598 YP_005786338.1 CDS HPSNT_00900 NC_017376.1 186750 186956 D hypothetical protein 186750..186956 Helicobacter pylori SNT49 12366599 YP_005786339.1 CDS HPSNT_00905 NC_017376.1 186953 187060 D hypothetical protein 186953..187060 Helicobacter pylori SNT49 12366600 YP_005786340.1 CDS HPSNT_00910 NC_017376.1 187096 187641 D COG0443 Molecular chaperone; hypothetical protein 187096..187641 Helicobacter pylori SNT49 12366601 YP_005786341.1 CDS HPSNT_00915 NC_017376.1 187653 188234 D COG2812 DNA polymerase III, gamma/tau subunits; hypothetical protein 187653..188234 Helicobacter pylori SNT49 12366602 YP_005786342.1 CDS HPSNT_00920 NC_017376.1 188323 189090 D hypothetical protein 188323..189090 Helicobacter pylori SNT49 12366603 YP_005786343.1 CDS HPSNT_00925 NC_017376.1 189087 189950 R COG2107 Predicted periplasmic solute-binding protein; hypothetical protein complement(189087..189950) Helicobacter pylori SNT49 12366604 YP_005786344.1 CDS recA NC_017376.1 190049 191092 D COG0468 RecA/RadA recombinase; recombinase A 190049..191092 Helicobacter pylori SNT49 12366605 YP_005786345.1 CDS eno NC_017376.1 191104 192384 D COG0148 Enolase; enolase 191104..192384 Helicobacter pylori SNT49 12366606 YP_005786346.1 CDS HPSNT_00940 NC_017376.1 192377 192652 D hypothetical protein 192377..192652 Helicobacter pylori SNT49 12366607 YP_005786347.1 CDS HPSNT_00945 NC_017376.1 192668 193264 D hypothetical protein 192668..193264 Helicobacter pylori SNT49 12366608 YP_005786348.1 CDS aroK NC_017376.1 193269 193757 D COG0703 Shikimate kinase; shikimate kinase 193269..193757 Helicobacter pylori SNT49 12366609 YP_005786349.1 CDS HPSNT_00955 NC_017376.1 193779 194735 D hypothetical protein 193779..194735 Helicobacter pylori SNT49 12366610 YP_005786350.1 CDS HPSNT_00960 NC_017376.1 194732 195850 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase RfaJ complement(194732..195850) Helicobacter pylori SNT49 12366611 YP_005786351.1 CDS HPSNT_00965 NC_017376.1 196002 196925 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 196002..196925 Helicobacter pylori SNT49 12366612 YP_005786352.1 CDS HPSNT_00970 NC_017376.1 197444 198166 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(197444..198166) Helicobacter pylori SNT49 12366613 YP_005786353.1 CDS HPSNT_00975 NC_017376.1 198167 199138 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(198167..199138) Helicobacter pylori SNT49 12366614 YP_005786354.1 CDS HPSNT_00980 NC_017376.1 199161 200489 R COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein complement(199161..200489) Helicobacter pylori SNT49 12366615 YP_005786355.1 CDS HPSNT_00985 NC_017376.1 200515 201192 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator (ompR) complement(200515..201192) Helicobacter pylori SNT49 12366616 YP_005786356.1 CDS HPSNT_00990 NC_017376.1 201447 201911 R hypothetical protein complement(201447..201911) Helicobacter pylori SNT49 12366617 YP_005786357.1 CDS HPSNT_00995 NC_017376.1 201902 202165 R COG0457 FOG: TPR repeat; hypothetical protein complement(201902..202165) Helicobacter pylori SNT49 12366618 YP_005786358.1 CDS HPSNT_01000 NC_017376.1 202213 203481 R COG0826 Collagenase and related proteases; collagenase (prtC) complement(202213..203481) Helicobacter pylori SNT49 12366619 YP_005786359.1 CDS HPSNT_01005 NC_017376.1 203484 204191 R hypothetical protein complement(203484..204191) Helicobacter pylori SNT49 12366620 YP_005786360.1 CDS prfB NC_017376.1 204261 205352 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(204261..205352) Helicobacter pylori SNT49 12366621 YP_005786361.1 CDS HPSNT_01015 NC_017376.1 205413 206588 R COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein complement(205413..206588) Helicobacter pylori SNT49 12366622 YP_005786362.1 CDS fliR NC_017376.1 206599 207366 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(206599..207366) Helicobacter pylori SNT49 12366623 YP_005786363.1 CDS HPSNT_01025 NC_017376.1 207360 208088 R hypothetical protein complement(207360..208088) Helicobacter pylori SNT49 12366624 YP_005786364.1 CDS HPSNT_01030 NC_017376.1 208310 208420 R hypothetical protein complement(208310..208420) Helicobacter pylori SNT49 12366625 YP_005786365.1 CDS HPSNT_01035 NC_017376.1 208567 209466 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 208567..209466 Helicobacter pylori SNT49 12366626 YP_005786366.1 CDS HPSNT_01040 NC_017376.1 209483 210406 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 209483..210406 Helicobacter pylori SNT49 12366627 YP_005786367.1 CDS HPSNT_01045 NC_017376.1 210428 210991 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 210428..210991 Helicobacter pylori SNT49 12366628 YP_005786368.1 CDS HPSNT_01050 NC_017376.1 211437 211574 R hypothetical protein complement(211437..211574) Helicobacter pylori SNT49 12366629 YP_005786369.1 CDS HPSNT_01055 NC_017376.1 211615 211878 R hypothetical protein complement(211615..211878) Helicobacter pylori SNT49 12366630 YP_005786370.1 CDS HPSNT_01060 NC_017376.1 212044 212325 D hypothetical protein 212044..212325 Helicobacter pylori SNT49 12366631 YP_005786371.1 CDS HPSNT_01065 NC_017376.1 212334 212591 D COG3041 Uncharacterized protein conserved in bacteria; ORF13 212334..212591 Helicobacter pylori SNT49 12366632 YP_005786372.1 CDS HPSNT_01070 NC_017376.1 212639 212731 D hypothetical protein 212639..212731 Helicobacter pylori SNT49 12366633 YP_005786373.1 CDS HPSNT_01075 NC_017376.1 212812 213834 R COG2089 Sialic acid synthase; sialic acid synthase complement(212812..213834) Helicobacter pylori SNT49 12366634 YP_005786374.1 CDS HPSNT_01080 NC_017376.1 213836 214477 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(213836..214477) Helicobacter pylori SNT49 12366635 YP_005786375.1 CDS HPSNT_01085 NC_017376.1 214474 215751 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(214474..215751) Helicobacter pylori SNT49 12366636 YP_005786376.1 CDS HPSNT_01090 NC_017376.1 215970 216671 D COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 215970..216671 Helicobacter pylori SNT49 12366637 YP_005786377.1 CDS lysS NC_017376.1 216681 218186 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 216681..218186 Helicobacter pylori SNT49 12366638 YP_005786378.1 CDS HPSNT_01100 NC_017376.1 218186 219436 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 218186..219436 Helicobacter pylori SNT49 12366639 YP_005786379.1 CDS HPSNT_01105 NC_017376.1 219447 219989 D hypothetical protein 219447..219989 Helicobacter pylori SNT49 12366640 YP_005786380.1 CDS HPSNT_01110 NC_017376.1 220011 220814 D hypothetical protein 220011..220814 Helicobacter pylori SNT49 12366641 YP_005786381.1 CDS HPSNT_01125 NC_017376.1 223086 223619 D COG2862 Predicted membrane protein; hypothetical protein 223086..223619 Helicobacter pylori SNT49 12366642 YP_005786382.1 CDS HPSNT_01130 NC_017376.1 223625 225133 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; hypothetical protein complement(223625..225133) Helicobacter pylori SNT49 12366643 YP_005786383.1 CDS frdB NC_017376.1 225154 225891 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(225154..225891) Helicobacter pylori SNT49 12366644 YP_005786384.1 CDS HPSNT_01140 NC_017376.1 225884 228028 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(225884..228028) Helicobacter pylori SNT49 12366645 YP_005786385.1 CDS HPSNT_01145 NC_017376.1 228038 228805 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit complement(228038..228805) Helicobacter pylori SNT49 12366646 YP_005786386.1 CDS tpiA NC_017376.1 229021 229725 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 229021..229725 Helicobacter pylori SNT49 12366647 YP_005786387.1 CDS HPSNT_01155 NC_017376.1 229735 230562 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 229735..230562 Helicobacter pylori SNT49 12366648 YP_005786388.1 CDS lpxD NC_017376.1 230572 231582 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 230572..231582 Helicobacter pylori SNT49 12366649 YP_005786389.1 CDS HPSNT_01165 NC_017376.1 231647 232804 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 231647..232804 Helicobacter pylori SNT49 12366650 YP_005786390.1 CDS ndk NC_017376.1 232871 233284 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 232871..233284 Helicobacter pylori SNT49 12366651 YP_005786391.1 CDS HPSNT_01175 NC_017376.1 233309 233665 D hypothetical protein 233309..233665 Helicobacter pylori SNT49 12366652 YP_005786392.1 CDS rpmF NC_017376.1 233681 233827 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 233681..233827 Helicobacter pylori SNT49 12366653 YP_005786393.1 CDS HPSNT_01185 NC_017376.1 233905 234924 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 233905..234924 Helicobacter pylori SNT49 12366654 YP_005786394.1 CDS HPSNT_01190 NC_017376.1 234949 235941 D COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 234949..235941 Helicobacter pylori SNT49 12366655 YP_005786395.1 CDS HPSNT_01195 NC_017376.1 235962 236264 D hypothetical protein 235962..236264 Helicobacter pylori SNT49 12366656 YP_005786396.1 CDS HPSNT_01200 NC_017376.1 236772 237155 R hypothetical protein complement(236772..237155) Helicobacter pylori SNT49 12366657 YP_005786397.1 CDS HPSNT_01215 NC_017376.1 240413 241519 D COG0489 ATPases involved in chromosome partitioning; ATP-binding protein 240413..241519 Helicobacter pylori SNT49 12366658 YP_005786398.1 CDS HPSNT_01220 NC_017376.1 241534 242556 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; LPS 1,2-glycosyltransferase complement(241534..242556) Helicobacter pylori SNT49 12366659 YP_005786399.1 CDS HPSNT_01225 NC_017376.1 242580 242693 R LPS 1,2-glycosyltransferase complement(242580..242693) Helicobacter pylori SNT49 12366660 YP_005786400.1 CDS HPSNT_01230 NC_017376.1 242852 244204 D hypothetical protein 242852..244204 Helicobacter pylori SNT49 12366661 YP_005786401.1 CDS HPSNT_01235 NC_017376.1 244307 246172 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 244307..246172 Helicobacter pylori SNT49 12366662 YP_005786402.1 CDS HPSNT_01240 NC_017376.1 246360 247112 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(246360..247112) Helicobacter pylori SNT49 12366663 YP_005786403.1 CDS HPSNT_01245 NC_017376.1 247192 248358 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(247192..248358) Helicobacter pylori SNT49 12366664 YP_005786404.1 CDS HPSNT_01250 NC_017376.1 248369 250234 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(248369..250234) Helicobacter pylori SNT49 12366665 YP_005786405.1 CDS HPSNT_01255 NC_017376.1 250330 251988 D COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 250330..251988 Helicobacter pylori SNT49 12366666 YP_005786406.1 CDS HPSNT_01260 NC_017376.1 252001 252801 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 252001..252801 Helicobacter pylori SNT49 12366667 YP_005786407.1 CDS HPSNT_01265 NC_017376.1 252802 253908 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 252802..253908 Helicobacter pylori SNT49 12366668 YP_005786408.1 CDS HPSNT_01270 NC_017376.1 253959 255134 D hypothetical protein 253959..255134 Helicobacter pylori SNT49 12366669 YP_005786409.1 CDS HPSNT_01275 NC_017376.1 255150 255701 R COG1881 Phospholipid-binding protein; hypothetical protein complement(255150..255701) Helicobacter pylori SNT49 12366670 YP_005786410.1 CDS HPSNT_01280 NC_017376.1 255842 256303 D hypothetical protein 255842..256303 Helicobacter pylori SNT49 12366671 YP_005786411.1 CDS HPSNT_01285 NC_017376.1 256484 257647 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 256484..257647 Helicobacter pylori SNT49 12366672 YP_005786412.1 CDS HPSNT_01290 NC_017376.1 257669 258649 D COG0822 NifU homolog involved in Fe-S cluster formation; nifU-like protein 257669..258649 Helicobacter pylori SNT49 12366673 YP_005786413.1 CDS HPSNT_01295 NC_017376.1 258816 259049 D hypothetical protein 258816..259049 Helicobacter pylori SNT49 12366674 YP_005786414.1 CDS HPSNT_01300 NC_017376.1 259160 260506 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 259160..260506 Helicobacter pylori SNT49 12366675 YP_005786415.1 CDS HPSNT_01305 NC_017376.1 260630 261709 D COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 260630..261709 Helicobacter pylori SNT49 12366676 YP_005786416.1 CDS HPSNT_01310 NC_017376.1 261989 262822 R COG0730 Predicted permeases; hypothetical protein complement(261989..262822) Helicobacter pylori SNT49 12366677 YP_005786417.1 CDS HPSNT_01315 NC_017376.1 262856 262963 R hypothetical protein complement(262856..262963) Helicobacter pylori SNT49 12366678 YP_005786418.1 CDS HPSNT_01320 NC_017376.1 263034 265115 R outer membrane protein complement(263034..265115) Helicobacter pylori SNT49 12366679 YP_005786419.1 CDS HPSNT_01325 NC_017376.1 265370 266527 D COG0659 Sulfate permease and related transporters (MFS superfamily); hypothetical protein 265370..266527 Helicobacter pylori SNT49 12366680 YP_005786420.1 CDS HPSNT_01340 NC_017376.1 268415 269146 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(268415..269146) Helicobacter pylori SNT49 12366682 YP_005786421.1 CDS HPSNT_01345 NC_017376.1 269260 270057 D COG1651 Protein-disulfide isomerase; hypothetical protein 269260..270057 Helicobacter pylori SNT49 12366683 YP_005786422.1 CDS HPSNT_01350 NC_017376.1 270073 270729 D hypothetical protein 270073..270729 Helicobacter pylori SNT49 12366684 YP_005786423.1 CDS HPSNT_01355 NC_017376.1 270753 271925 D COG0754 Glutathionylspermidine synthase; hypothetical protein 270753..271925 Helicobacter pylori SNT49 12366685 YP_005786424.1 CDS HPSNT_01360 NC_017376.1 271925 272455 D hypothetical protein 271925..272455 Helicobacter pylori SNT49 12366686 YP_005786425.1 CDS HPSNT_01365 NC_017376.1 272729 272872 R hypothetical protein complement(272729..272872) Helicobacter pylori SNT49 12366687 YP_005786426.1 CDS HPSNT_01370 NC_017376.1 273168 274235 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(273168..274235) Helicobacter pylori SNT49 12366688 YP_005786427.1 CDS HPSNT_01375 NC_017376.1 274329 274700 R hypothetical protein complement(274329..274700) Helicobacter pylori SNT49 12366689 YP_005786428.1 CDS hemC NC_017376.1 274700 275620 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(274700..275620) Helicobacter pylori SNT49 12366690 YP_005786429.1 CDS HPSNT_01385 NC_017376.1 275631 277364 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(275631..277364) Helicobacter pylori SNT49 12366691 YP_005786430.1 CDS hemA NC_017376.1 277368 278711 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(277368..278711) Helicobacter pylori SNT49 12366692 YP_005786431.1 CDS HPSNT_01395 NC_017376.1 278711 279634 R COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl-diphosphate synthase (ispB) complement(278711..279634) Helicobacter pylori SNT49 12366693 YP_005786432.1 CDS HPSNT_01400 NC_017376.1 279644 280039 R hypothetical protein complement(279644..280039) Helicobacter pylori SNT49 12366694 YP_005786433.1 CDS HPSNT_01405 NC_017376.1 280032 280316 R hypothetical protein complement(280032..280316) Helicobacter pylori SNT49 12366695 YP_005786434.1 CDS HPSNT_01410 NC_017376.1 280337 280771 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Neutrophil activating protein NapA (bacterioferritin) complement(280337..280771) Helicobacter pylori SNT49 12366696 YP_005786435.1 CDS HPSNT_01415 NC_017376.1 280977 282122 R COG0642 Signal transduction histidine kinase; histidine kinase sensor protein complement(280977..282122) Helicobacter pylori SNT49 12366697 YP_005786436.1 CDS HPSNT_01420 NC_017376.1 282119 282436 R hypothetical protein complement(282119..282436) Helicobacter pylori SNT49 12366698 YP_005786437.1 CDS flgI NC_017376.1 282433 283461 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(282433..283461) Helicobacter pylori SNT49 12366699 YP_005786438.1 CDS HPSNT_01430 NC_017376.1 283650 285128 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase 283650..285128 Helicobacter pylori SNT49 12366700 YP_005786439.1 CDS HPSNT_01435 NC_017376.1 285149 286237 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 285149..286237 Helicobacter pylori SNT49 12366701 YP_005786440.1 CDS HPSNT_01440 NC_017376.1 286244 286783 D hypothetical protein 286244..286783 Helicobacter pylori SNT49 12366702 YP_005786441.1 CDS HPSNT_01445 NC_017376.1 286832 288382 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; oligopeptide permease ATPase protein complement(286832..288382) Helicobacter pylori SNT49 12366703 YP_005786442.1 CDS HPSNT_01450 NC_017376.1 288392 289414 R COG4239 ABC-type uncharacterized transport system, permease component; oligopeptide permease integral membrane protein complement(288392..289414) Helicobacter pylori SNT49 12366704 YP_005786443.1 CDS HPSNT_01455 NC_017376.1 289750 291186 D Outer membrane protein HopF 289750..291186 Helicobacter pylori SNT49 12366706 YP_005786444.1 CDS HPSNT_01460 NC_017376.1 291199 292629 D COG1066 Predicted ATP-dependent serine protease; Outer membrane protein HopG 291199..292629 Helicobacter pylori SNT49 12366707 YP_005786445.1 CDS HPSNT_01465 NC_017376.1 292728 293963 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 292728..293963 Helicobacter pylori SNT49 12366708 YP_005786446.1 CDS HPSNT_01470 NC_017376.1 293960 294388 D hypothetical protein 293960..294388 Helicobacter pylori SNT49 12366709 YP_005786447.1 CDS HPSNT_01475 NC_017376.1 294381 295052 D COG3334 Uncharacterized conserved protein; hypothetical protein 294381..295052 Helicobacter pylori SNT49 12366710 YP_005786448.1 CDS HPSNT_01480 NC_017376.1 295052 296101 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 295052..296101 Helicobacter pylori SNT49 12366711 YP_005786449.1 CDS xseA NC_017376.1 296114 297376 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 296114..297376 Helicobacter pylori SNT49 12366712 YP_005786450.1 CDS HPSNT_01490 NC_017376.1 297395 298369 R COG2189 Adenine specific DNA methylase Mod; type III adenine methyltransferase complement(297395..298369) Helicobacter pylori SNT49 12366713 YP_005786451.1 CDS HPSNT_01495 NC_017376.1 298449 299138 D Endonuclease MjaVIP 298449..299138 Helicobacter pylori SNT49 12366714 YP_005786452.1 CDS HPSNT_01500 NC_017376.1 299135 299893 D COG0863 DNA modification methylase; putative adenine-specific DNA-methyltransferase 299135..299893 Helicobacter pylori SNT49 12366715 YP_005786453.1 CDS HPSNT_01505 NC_017376.1 299966 302536 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease binding subunit / heatshock protein 299966..302536 Helicobacter pylori SNT49 12366716 YP_005786454.1 CDS HPSNT_01510 NC_017376.1 302593 303312 D COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 302593..303312 Helicobacter pylori SNT49 12366717 YP_005786455.1 CDS HPSNT_01515 NC_017376.1 303322 304458 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 303322..304458 Helicobacter pylori SNT49 12366718 YP_005786456.1 CDS HPSNT_01520 NC_017376.1 304443 305672 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 304443..305672 Helicobacter pylori SNT49 12366719 YP_005786457.1 CDS HPSNT_01525 NC_017376.1 305733 305975 D hypothetical protein 305733..305975 Helicobacter pylori SNT49 12366720 YP_005786458.1 CDS HPSNT_01530 NC_017376.1 305985 307298 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 305985..307298 Helicobacter pylori SNT49 12366721 YP_005786459.1 CDS HPSNT_01535 NC_017376.1 307337 307990 D COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 307337..307990 Helicobacter pylori SNT49 12366722 YP_005786460.1 CDS HPSNT_01540 NC_017376.1 307983 308966 D hypothetical protein 307983..308966 Helicobacter pylori SNT49 12366723 YP_005786461.1 CDS HPSNT_01545 NC_017376.1 308956 309489 D hypothetical protein 308956..309489 Helicobacter pylori SNT49 12366724 YP_005786462.1 CDS HPSNT_01550 NC_017376.1 309486 310025 D hypothetical protein 309486..310025 Helicobacter pylori SNT49 12366725 YP_005786463.1 CDS HPSNT_01555 NC_017376.1 310042 310440 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 310042..310440 Helicobacter pylori SNT49 12366726 YP_005786464.1 CDS HPSNT_01560 NC_017376.1 310477 311769 D COG0457 FOG: TPR repeat; ATP-dependent nuclease 310477..311769 Helicobacter pylori SNT49 12366727 YP_005786465.1 CDS HPSNT_01565 NC_017376.1 311757 312314 D hypothetical protein 311757..312314 Helicobacter pylori SNT49 12366728 YP_005786466.1 CDS HPSNT_01570 NC_017376.1 312371 312622 D COG1145 Ferredoxin; ferrodoxin 312371..312622 Helicobacter pylori SNT49 12366729 YP_005786467.1 CDS HPSNT_01575 NC_017376.1 312632 314086 D COG0248 Exopolyphosphatase; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 312632..314086 Helicobacter pylori SNT49 12366730 YP_005786468.1 CDS HPSNT_01580 NC_017376.1 314083 315099 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 314083..315099 Helicobacter pylori SNT49 12366731 YP_005786469.1 CDS HPSNT_01585 NC_017376.1 315089 316075 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 315089..316075 Helicobacter pylori SNT49 12366732 YP_005786470.1 CDS tgt NC_017376.1 316174 317289 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(316174..317289) Helicobacter pylori SNT49 12366733 YP_005786471.1 CDS HPSNT_01595 NC_017376.1 317346 318782 D COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 317346..318782 Helicobacter pylori SNT49 12366734 YP_005786472.1 CDS aroB NC_017376.1 318787 319818 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 318787..319818 Helicobacter pylori SNT49 12366735 YP_005786473.1 CDS HPSNT_01605 NC_017376.1 319809 321380 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein 319809..321380 Helicobacter pylori SNT49 12366736 YP_005786474.1 CDS HPSNT_01610 NC_017376.1 321377 322633 D COG0621 2-methylthioadenine synthetase; hypothetical protein 321377..322633 Helicobacter pylori SNT49 12366737 YP_005786475.1 CDS HPSNT_01615 NC_017376.1 322620 324272 D COG0465 ATP-dependent Zn proteases; cell division protein 322620..324272 Helicobacter pylori SNT49 12366738 YP_005786476.1 CDS HPSNT_01620 NC_017376.1 324275 324793 D hypothetical protein 324275..324793 Helicobacter pylori SNT49 12366739 YP_005786477.1 CDS HPSNT_01625 NC_017376.1 324806 325279 D hypothetical protein 324806..325279 Helicobacter pylori SNT49 12366740 YP_005786478.1 CDS HPSNT_01630 NC_017376.1 325346 334042 D toxin-like outer membrane protein 325346..334042 Helicobacter pylori SNT49 12366741 YP_005786479.1 CDS HPSNT_01635 NC_017376.1 334090 335307 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 334090..335307 Helicobacter pylori SNT49 12366742 YP_005786480.1 CDS HPSNT_01640 NC_017376.1 335312 335602 D COG1605 Chorismate mutase; putative chorismate mutase PheA 335312..335602 Helicobacter pylori SNT49 12366743 YP_005786481.1 CDS HPSNT_01645 NC_017376.1 335615 336487 D COG4866 Uncharacterized conserved protein; hypothetical protein 335615..336487 Helicobacter pylori SNT49 12366744 YP_005786482.1 CDS HPSNT_01650 NC_017376.1 336488 338167 D COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthetase 336488..338167 Helicobacter pylori SNT49 12366745 YP_005786483.1 CDS amiE NC_017376.1 338364 339383 D COG0388 Predicted amidohydrolase; acylamide amidohydrolase 338364..339383 Helicobacter pylori SNT49 12366746 YP_005786484.1 CDS flgL NC_017376.1 339464 341950 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(339464..341950) Helicobacter pylori SNT49 12366747 YP_005786485.1 CDS rplU NC_017376.1 342195 342509 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 342195..342509 Helicobacter pylori SNT49 12366748 YP_005786486.1 CDS rpmA NC_017376.1 342524 342790 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 342524..342790 Helicobacter pylori SNT49 12366749 YP_005786487.1 CDS HPSNT_01675 NC_017376.1 342907 344556 D COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter periplasmic dipeptide-binding protein DppA 342907..344556 Helicobacter pylori SNT49 12366750 YP_005786488.1 CDS HPSNT_01680 NC_017376.1 344567 345571 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transport system permease 344567..345571 Helicobacter pylori SNT49 12366751 YP_005786489.1 CDS HPSNT_01685 NC_017376.1 345571 346428 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide ABC transporter permease protein (dppC) 345571..346428 Helicobacter pylori SNT49 12366752 YP_005786490.1 CDS HPSNT_01690 NC_017376.1 346440 347303 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; dipeptide ABC transporter ATP-binding protein (dppD) 346440..347303 Helicobacter pylori SNT49 12366753 YP_005786491.1 CDS HPSNT_01695 NC_017376.1 347300 348106 D COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide ABC transporter 347300..348106 Helicobacter pylori SNT49 12366754 YP_005786492.1 CDS obgE NC_017376.1 348126 349208 D COG0536 Predicted GTPase; GTPase CgtA 348126..349208 Helicobacter pylori SNT49 12366755 YP_005786493.1 CDS HPSNT_01705 NC_017376.1 349250 350245 D hypothetical protein 349250..350245 Helicobacter pylori SNT49 12366756 YP_005786494.1 CDS HPSNT_01710 NC_017376.1 350485 351039 D hypothetical protein 350485..351039 Helicobacter pylori SNT49 12366757 YP_005786495.1 CDS HPSNT_01715 NC_017376.1 351049 352341 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 351049..352341 Helicobacter pylori SNT49 12366758 YP_005786496.1 CDS HPSNT_01720 NC_017376.1 352347 352610 D hypothetical protein 352347..352610 Helicobacter pylori SNT49 12366759 YP_005786497.1 CDS HPSNT_01725 NC_017376.1 352626 353027 D hypothetical protein 352626..353027 Helicobacter pylori SNT49 12366760 YP_005786498.1 CDS HPSNT_01730 NC_017376.1 353111 353995 D COG0388 Predicted amidohydrolase; hypothetical protein 353111..353995 Helicobacter pylori SNT49 12366761 YP_005786499.1 CDS HPSNT_01735 NC_017376.1 354008 354889 D COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein 354008..354889 Helicobacter pylori SNT49 12366762 YP_005786500.1 CDS HPSNT_01740 NC_017376.1 354943 355596 R type II restriction enzyme complement(354943..355596) Helicobacter pylori SNT49 12366763 YP_005786501.1 CDS HPSNT_01745 NC_017376.1 355646 356755 R COG0863 DNA modification methylase; DNA methylase complement(355646..356755) Helicobacter pylori SNT49 12366764 YP_005786502.1 CDS HPSNT_01750 NC_017376.1 356851 357216 D hypothetical protein 356851..357216 Helicobacter pylori SNT49 12366765 YP_005786503.1 CDS HPSNT_01755 NC_017376.1 357216 358178 D COG0523 Putative GTPases (G3E family); cobalamin syntheis protein, P47K family; ATP/GTP binding protein 357216..358178 Helicobacter pylori SNT49 12366766 YP_005786504.1 CDS HPSNT_01760 NC_017376.1 358184 359329 R COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein (narK) complement(358184..359329) Helicobacter pylori SNT49 12366767 YP_005786505.1 CDS HPSNT_01765 NC_017376.1 359720 360475 R COG0748 Putative heme iron utilization protein; putative heme iron utilization protein complement(359720..360475) Helicobacter pylori SNT49 12366768 YP_005786506.1 CDS argS NC_017376.1 360536 362161 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(360536..362161) Helicobacter pylori SNT49 12366769 YP_005786507.1 CDS HPSNT_01775 NC_017376.1 362164 362403 R COG1826 Sec-independent protein secretion pathway components; Sec-independent protein translocase protein tatA/E-like protein complement(362164..362403) Helicobacter pylori SNT49 12366770 YP_005786508.1 CDS gmk NC_017376.1 362474 363094 R COG0194 Guanylate kinase; guanylate kinase complement(362474..363094) Helicobacter pylori SNT49 12366771 YP_005786509.1 CDS HPSNT_01785 NC_017376.1 363087 364712 R poly E-rich protein complement(363087..364712) Helicobacter pylori SNT49 12366772 YP_005786510.1 CDS HPSNT_01790 NC_017376.1 364856 365398 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 364856..365398 Helicobacter pylori SNT49 12366773 YP_005786511.1 CDS HPSNT_01795 NC_017376.1 365405 366142 R outer membrane protein (omp10) complement(365405..366142) Helicobacter pylori SNT49 12366774 YP_005786512.1 CDS flgH NC_017376.1 366272 366985 D COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 366272..366985 Helicobacter pylori SNT49 12366775 YP_005786513.1 CDS HPSNT_01805 NC_017376.1 367003 367686 D COG1083 CMP-N-acetylneuraminic acid synthetase; CMP-N-acetylneuraminic acid synthetase 367003..367686 Helicobacter pylori SNT49 12366776 YP_005786514.1 CDS HPSNT_01810 NC_017376.1 367677 368549 D COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; CMP-N-acetylneuraminic acid synthetase (neuA) 367677..368549 Helicobacter pylori SNT49 12366777 YP_005786515.1 CDS HPSNT_01815 NC_017376.1 368546 369088 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 368546..369088 Helicobacter pylori SNT49 12366778 YP_005786516.1 CDS lpxK NC_017376.1 369021 369959 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(369021..369959) Helicobacter pylori SNT49 12366779 YP_005786517.1 CDS HPSNT_01825 NC_017376.1 369956 370738 R COG0171 NAD synthase; NAD synthetase complement(369956..370738) Helicobacter pylori SNT49 12366780 YP_005786518.1 CDS HPSNT_01830 NC_017376.1 370996 371988 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 370996..371988 Helicobacter pylori SNT49 12366782 YP_005786519.1 CDS HPSNT_01835 NC_017376.1 372012 372818 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor 372012..372818 Helicobacter pylori SNT49 12366783 YP_005786520.1 CDS minE NC_017376.1 372815 373048 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 372815..373048 Helicobacter pylori SNT49 12366784 YP_005786521.1 CDS HPSNT_01845 NC_017376.1 373055 373855 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing protein DprA 373055..373855 Helicobacter pylori SNT49 12366785 YP_005786522.1 CDS HPSNT_01850 NC_017376.1 373852 374256 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 373852..374256 Helicobacter pylori SNT49 12366786 YP_005786523.1 CDS HPSNT_01855 NC_017376.1 374389 374541 D COG0790 FOG: TPR repeat, SEL1 subfamily; Hcp beta-lactamase-like protein 374389..374541 Helicobacter pylori SNT49 12366787 YP_005786524.1 CDS HPSNT_01860 NC_017376.1 374664 374969 D hypothetical protein 374664..374969 Helicobacter pylori SNT49 12366788 YP_005786525.1 CDS HPSNT_01865 NC_017376.1 374953 375519 D hypothetical protein 374953..375519 Helicobacter pylori SNT49 12366789 YP_005786526.1 CDS HPSNT_01870 NC_017376.1 375603 376484 R COG0564 Pseudouridylate synthases, 23S RNA-specific; Pseudouridine synthase (RNA-uridine isomerase) (RNA pseudouridylate synthase) complement(375603..376484) Helicobacter pylori SNT49 12366790 YP_005786527.1 CDS HPSNT_01875 NC_017376.1 376484 378034 R COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease complement(376484..378034) Helicobacter pylori SNT49 12366791 YP_005786528.1 CDS pyrG NC_017376.1 378043 379659 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(378043..379659) Helicobacter pylori SNT49 12366792 YP_005786529.1 CDS HPSNT_01885 NC_017376.1 379917 380585 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 379917..380585 Helicobacter pylori SNT49 12366793 YP_005786530.1 CDS fliF NC_017376.1 380629 382332 D COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 380629..382332 Helicobacter pylori SNT49 12366794 YP_005786531.1 CDS fliG NC_017376.1 382350 383381 D COG1536 Flagellar motor switch protein; flagellar motor switch protein G 382350..383381 Helicobacter pylori SNT49 12366795 YP_005786532.1 CDS fliH NC_017376.1 383368 384144 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 383368..384144 Helicobacter pylori SNT49 12366796 YP_005786533.1 CDS HPSNT_01905 NC_017376.1 384147 385997 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 384147..385997 Helicobacter pylori SNT49 12366797 YP_005786534.1 CDS HPSNT_01910 NC_017376.1 386012 387802 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 386012..387802 Helicobacter pylori SNT49 12366798 YP_005786535.1 CDS HPSNT_01915 NC_017376.1 387817 388572 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein 387817..388572 Helicobacter pylori SNT49 12366799 YP_005786536.1 CDS HPSNT_01920 NC_017376.1 388846 389655 R COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein complement(388846..389655) Helicobacter pylori SNT49 12366800 YP_005786537.1 CDS HPSNT_01925 NC_017376.1 389711 390991 R COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease (kgtP) complement(389711..390991) Helicobacter pylori SNT49 12366801 YP_005786538.1 CDS HPSNT_01930 NC_017376.1 391159 393693 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA segregation ATPase FtsK/SpoIIIE complement(391159..393693) Helicobacter pylori SNT49 12366802 YP_005786539.1 CDS HPSNT_01935 NC_017376.1 393690 396026 R COG3893 Inactivated superfamily I helicase; hypothetical protein complement(393690..396026) Helicobacter pylori SNT49 12366803 YP_005786540.1 CDS HPSNT_01940 NC_017376.1 396023 397948 R COG0021 Transketolase; transketolase complement(396023..397948) Helicobacter pylori SNT49 12366804 YP_005786541.1 CDS HPSNT_01945 NC_017376.1 397995 398837 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(397995..398837) Helicobacter pylori SNT49 12366805 YP_005786542.1 CDS HPSNT_01950 NC_017376.1 398803 399510 R COG1189 Predicted rRNA methylase; hemolysin complement(398803..399510) Helicobacter pylori SNT49 12366806 YP_005786543.1 CDS HPSNT_01955 NC_017376.1 399510 400025 R hypothetical protein complement(399510..400025) Helicobacter pylori SNT49 12366807 YP_005786544.1 CDS pyrB NC_017376.1 400092 401015 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 400092..401015 Helicobacter pylori SNT49 12366808 YP_005786545.1 CDS HPSNT_01975 NC_017376.1 402834 404489 D COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid A and glycerophospholipid transporter; membrane protein; ABC transporter ATP-binding protein 402834..404489 Helicobacter pylori SNT49 12366809 YP_005786546.1 CDS HPSNT_01980 NC_017376.1 404483 405106 D hypothetical protein 404483..405106 Helicobacter pylori SNT49 12366810 YP_005786547.1 CDS HPSNT_01985 NC_017376.1 405110 405688 D Mrr protein; COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; Holliday junction resolvase-like protein 405110..405688 Helicobacter pylori SNT49 12366811 YP_005786548.1 CDS HPSNT_01990 NC_017376.1 405812 406963 D COG1106 Predicted ATPases; hypothetical protein 405812..406963 Helicobacter pylori SNT49 12366812 YP_005786549.1 CDS HPSNT_01995 NC_017376.1 406986 407669 D hypothetical protein 406986..407669 Helicobacter pylori SNT49 12366813 YP_005786550.1 CDS HPSNT_02000 NC_017376.1 407725 408720 D COG3376 High-affinity nickel permease; high-affinity nickel-transport protein 407725..408720 Helicobacter pylori SNT49 12366814 YP_005786551.1 CDS HPSNT_02005 NC_017376.1 408724 409239 R hypothetical protein complement(408724..409239) Helicobacter pylori SNT49 12366815 YP_005786552.1 CDS HPSNT_02010 NC_017376.1 409374 410690 D hypothetical protein 409374..410690 Helicobacter pylori SNT49 12366816 YP_005786553.1 CDS HPSNT_02015 NC_017376.1 411051 411149 R hypothetical protein complement(411051..411149) Helicobacter pylori SNT49 12366817 YP_005786554.1 CDS HPSNT_02020 NC_017376.1 411203 411403 R COG2608 Copper chaperone; copper ion binding protein complement(411203..411403) Helicobacter pylori SNT49 12366818 YP_005786555.1 CDS HPSNT_02025 NC_017376.1 411404 413641 R COG2217 Cation transport ATPase; copper-transporting ATPase complement(411404..413641) Helicobacter pylori SNT49 12366819 YP_005786556.1 CDS HPSNT_02030 NC_017376.1 413638 414351 R COG1183 Phosphatidylserine synthase; phosphatidylserine synthase complement(413638..414351) Helicobacter pylori SNT49 12366820 YP_005786557.1 CDS HPSNT_02035 NC_017376.1 414341 414595 R hypothetical protein complement(414341..414595) Helicobacter pylori SNT49 12366821 YP_005786558.1 CDS HPSNT_02040 NC_017376.1 414598 416496 R COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) complement(414598..416496) Helicobacter pylori SNT49 12366822 YP_005786559.1 CDS prmA NC_017376.1 416505 417494 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(416505..417494) Helicobacter pylori SNT49 12366823 YP_005786560.1 CDS HPSNT_02050 NC_017376.1 417495 417869 R COG0784 FOG: CheY-like receiver; Chemotactic response regulator, two-component system complement(417495..417869) Helicobacter pylori SNT49 12366824 YP_005786561.1 CDS HPSNT_02055 NC_017376.1 418160 418762 D outer membrane protein HorD 418160..418762 Helicobacter pylori SNT49 12366825 YP_005786562.1 CDS HPSNT_02060 NC_017376.1 418894 419301 R hypothetical protein complement(418894..419301) Helicobacter pylori SNT49 12366827 YP_005786563.1 CDS HPSNT_02065 NC_017376.1 419304 419534 R hypothetical protein complement(419304..419534) Helicobacter pylori SNT49 12366828 YP_005786564.1 CDS gidB NC_017376.1 419528 420064 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(419528..420064) Helicobacter pylori SNT49 12366829 YP_005786565.1 CDS queA NC_017376.1 420061 421098 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(420061..421098) Helicobacter pylori SNT49 12366830 YP_005786566.1 CDS HPSNT_02080 NC_017376.1 421099 421848 R COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein tatC-like protein complement(421099..421848) Helicobacter pylori SNT49 12366831 YP_005786567.1 CDS HPSNT_02085 NC_017376.1 421841 422323 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(421841..422323) Helicobacter pylori SNT49 12366832 YP_005786568.1 CDS ruvB NC_017376.1 422391 423401 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(422391..423401) Helicobacter pylori SNT49 12366833 YP_005786569.1 CDS panB NC_017376.1 423402 424214 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(423402..424214) Helicobacter pylori SNT49 12366834 YP_005786570.1 CDS HPSNT_02100 NC_017376.1 424363 425085 D hypothetical protein 424363..425085 Helicobacter pylori SNT49 12366835 YP_005786571.1 CDS HPSNT_02105 NC_017376.1 425075 425899 D hypothetical protein 425075..425899 Helicobacter pylori SNT49 12366836 YP_005786572.1 CDS HPSNT_02110 NC_017376.1 425911 426852 D hypothetical protein 425911..426852 Helicobacter pylori SNT49 12366837 YP_005786573.1 CDS HPSNT_02115 NC_017376.1 426862 428184 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 426862..428184 Helicobacter pylori SNT49 12366838 YP_005786574.1 CDS minC NC_017376.1 428187 428774 D COG0850 Septum formation inhibitor; septum formation inhibitor 428187..428774 Helicobacter pylori SNT49 12366839 YP_005786575.1 CDS lpxC NC_017376.1 428771 429658 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 428771..429658 Helicobacter pylori SNT49 12366840 YP_005786576.1 CDS HPSNT_02130 NC_017376.1 429680 430153 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 429680..430153 Helicobacter pylori SNT49 12366841 YP_005786577.1 CDS HPSNT_02135 NC_017376.1 430207 431088 D COG0083 Homoserine kinase; homoserine kinase 430207..431088 Helicobacter pylori SNT49 12366842 YP_005786578.1 CDS HPSNT_02140 NC_017376.1 431075 431329 D COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 431075..431329 Helicobacter pylori SNT49 12366843 YP_005786579.1 CDS infB NC_017376.1 431326 434181 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 431326..434181 Helicobacter pylori SNT49 12366844 YP_005786580.1 CDS rbfA NC_017376.1 434181 434516 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 434181..434516 Helicobacter pylori SNT49 12366845 YP_005786581.1 CDS HPSNT_02155 NC_017376.1 434509 434949 D COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 434509..434949 Helicobacter pylori SNT49 12366846 YP_005786582.1 CDS HPSNT_02160 NC_017376.1 435057 437045 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase complement(435057..437045) Helicobacter pylori SNT49 12366847 YP_005786583.1 CDS HPSNT_02165 NC_017376.1 437248 438360 D COG1408 Predicted phosphohydrolases; hypothetical protein 437248..438360 Helicobacter pylori SNT49 12366848 YP_005786584.1 CDS HPSNT_02170 NC_017376.1 438446 438595 D hypothetical protein 438446..438595 Helicobacter pylori SNT49 12366849 YP_005786585.1 CDS HPSNT_02175 NC_017376.1 438740 439411 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 438740..439411 Helicobacter pylori SNT49 12366850 YP_005786586.1 CDS HPSNT_02180 NC_017376.1 439551 439664 D hypothetical protein 439551..439664 Helicobacter pylori SNT49 12366851 YP_005786587.1 CDS HPSNT_02185 NC_017376.1 440131 441174 R COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein complement(440131..441174) Helicobacter pylori SNT49 12366852 YP_005786588.1 CDS flhA NC_017376.1 441205 443406 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(441205..443406) Helicobacter pylori SNT49 12366853 YP_005786589.1 CDS rpsO NC_017376.1 443546 443818 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 443546..443818 Helicobacter pylori SNT49 12366854 YP_005786590.1 CDS HPSNT_02200 NC_017376.1 443849 445138 D COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 443849..445138 Helicobacter pylori SNT49 12366855 YP_005786591.1 CDS HPSNT_02205 NC_017376.1 445269 445772 D COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 445269..445772 Helicobacter pylori SNT49 12366856 YP_005786592.1 CDS HPSNT_02210 NC_017376.1 445786 446859 D COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 445786..446859 Helicobacter pylori SNT49 12366857 YP_005786593.1 CDS HPSNT_02215 NC_017376.1 446856 447347 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 446856..447347 Helicobacter pylori SNT49 12366858 YP_005786594.1 CDS flhF NC_017376.1 447344 448720 D COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 447344..448720 Helicobacter pylori SNT49 12366859 YP_005786595.1 CDS HPSNT_02225 NC_017376.1 448717 449601 D COG0455 ATPases involved in chromosome partitioning; flagellar biosynthesis protein FlhG 448717..449601 Helicobacter pylori SNT49 12366860 YP_005786596.1 CDS HPSNT_02230 NC_017376.1 449606 449920 D hypothetical protein 449606..449920 Helicobacter pylori SNT49 12366861 YP_005786597.1 CDS fliA NC_017376.1 449898 450674 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 449898..450674 Helicobacter pylori SNT49 12366862 YP_005786598.1 CDS fliM NC_017376.1 450667 451731 D COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 450667..451731 Helicobacter pylori SNT49 12366863 YP_005786599.1 CDS HPSNT_02245 NC_017376.1 451735 452598 D COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 451735..452598 Helicobacter pylori SNT49 12366864 YP_005786600.1 CDS HPSNT_02250 NC_017376.1 452627 453163 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 452627..453163 Helicobacter pylori SNT49 12366865 YP_005786601.1 CDS HPSNT_02255 NC_017376.1 453160 453657 D COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 453160..453657 Helicobacter pylori SNT49 12366866 YP_005786602.1 CDS HPSNT_02260 NC_017376.1 453677 454129 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(453677..454129) Helicobacter pylori SNT49 12366867 YP_005786603.1 CDS HPSNT_02265 NC_017376.1 454289 455464 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(454289..455464) Helicobacter pylori SNT49 12366868 YP_005786604.1 CDS HPSNT_02270 NC_017376.1 455461 455832 R COG0789 Predicted transcriptional regulators; putative heat shock protein (hspR) complement(455461..455832) Helicobacter pylori SNT49 12366869 YP_005786605.1 CDS HPSNT_02275 NC_017376.1 455842 456708 R COG2214 DnaJ-class molecular chaperone; co-chaperone-curved DNA binding protein A complement(455842..456708) Helicobacter pylori SNT49 12366870 YP_005786606.1 CDS HPSNT_02280 NC_017376.1 456876 458126 D hypothetical protein 456876..458126 Helicobacter pylori SNT49 12366871 YP_005786607.1 CDS HPSNT_02295 NC_017376.1 459311 460207 R COG0784 FOG: CheY-like receiver; response regulator complement(459311..460207) Helicobacter pylori SNT49 12366872 YP_005786608.1 CDS ispDF NC_017376.1 460229 461449 R COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(460229..461449) Helicobacter pylori SNT49 12366873 YP_005786609.1 CDS HPSNT_02305 NC_017376.1 461471 462901 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine protease Do complement(461471..462901) Helicobacter pylori SNT49 12366874 YP_005786610.1 CDS HPSNT_02310 NC_017376.1 462946 464388 R COG0833 Amino acid transporters; transporter; amino-acid transporter, AAT family; membrane protein complement(462946..464388) Helicobacter pylori SNT49 12366875 YP_005786611.1 CDS HPSNT_02315 NC_017376.1 464585 465124 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(464585..465124) Helicobacter pylori SNT49 12366876 YP_005786612.1 CDS HPSNT_02320 NC_017376.1 465121 465729 R hypothetical protein complement(465121..465729) Helicobacter pylori SNT49 12366877 YP_005786613.1 CDS HPSNT_02325 NC_017376.1 465706 465813 D hypothetical protein 465706..465813 Helicobacter pylori SNT49 12366878 YP_005786614.1 CDS HPSNT_02330 NC_017376.1 465739 466527 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase complement(465739..466527) Helicobacter pylori SNT49 12366879 YP_005786615.1 CDS HPSNT_02335 NC_017376.1 466524 467426 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(466524..467426) Helicobacter pylori SNT49 12366880 YP_005786616.1 CDS HPSNT_02340 NC_017376.1 467441 468775 R COG0612 Predicted Zn-dependent peptidases; putative zinc protease complement(467441..468775) Helicobacter pylori SNT49 12366881 YP_005786617.1 CDS HPSNT_02345 NC_017376.1 468772 469827 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(468772..469827) Helicobacter pylori SNT49 12366882 YP_005786618.1 CDS HPSNT_02350 NC_017376.1 469864 471891 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(469864..471891) Helicobacter pylori SNT49 12366883 YP_005786619.1 CDS HPSNT_02355 NC_017376.1 472043 472153 R hypothetical protein complement(472043..472153) Helicobacter pylori SNT49 12366885 YP_005786620.1 CDS HPSNT_02360 NC_017376.1 472381 473610 R COG0732 Restriction endonuclease S subunits; type I restriction enzyme specificity subunit complement(472381..473610) Helicobacter pylori SNT49 12366886 YP_005786621.1 CDS HPSNT_02365 NC_017376.1 473603 475234 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(473603..475234) Helicobacter pylori SNT49 12366887 YP_005786622.1 CDS HPSNT_02370 NC_017376.1 475224 478382 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(475224..478382) Helicobacter pylori SNT49 12366888 YP_005786623.1 CDS HPSNT_02375 NC_017376.1 478430 480325 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(478430..480325) Helicobacter pylori SNT49 12366889 YP_005786624.1 CDS HPSNT_02380 NC_017376.1 480351 481118 R hypothetical protein complement(480351..481118) Helicobacter pylori SNT49 12366890 YP_005786625.1 CDS HPSNT_02385 NC_017376.1 481128 481442 R hypothetical protein complement(481128..481442) Helicobacter pylori SNT49 12366891 YP_005786626.1 CDS HPSNT_02390 NC_017376.1 481444 482931 R COG2048 Heterodisulfide reductase, subunit B; hypothetical protein complement(481444..482931) Helicobacter pylori SNT49 12366892 YP_005786627.1 CDS HPSNT_02395 NC_017376.1 482943 483431 R hypothetical protein complement(482943..483431) Helicobacter pylori SNT49 12366893 YP_005786628.1 CDS HPSNT_02400 NC_017376.1 483416 485152 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(483416..485152) Helicobacter pylori SNT49 12366894 YP_005786629.1 CDS HPSNT_02415 NC_017376.1 486821 487381 R hypothetical protein complement(486821..487381) Helicobacter pylori SNT49 12366895 YP_005786630.1 CDS HPSNT_02420 NC_017376.1 487425 487586 R hypothetical protein complement(487425..487586) Helicobacter pylori SNT49 12366896 YP_005786631.1 CDS HPSNT_02425 NC_017376.1 487609 488349 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdenum ABC transporter ModA 487609..488349 Helicobacter pylori SNT49 12366897 YP_005786632.1 CDS HPSNT_02430 NC_017376.1 488372 489046 D COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 488372..489046 Helicobacter pylori SNT49 12366898 YP_005786633.1 CDS HPSNT_02435 NC_017376.1 489043 489840 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 489043..489840 Helicobacter pylori SNT49 12366899 YP_005786634.1 CDS gltX NC_017376.1 489939 491330 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(489939..491330) Helicobacter pylori SNT49 12366900 YP_005786635.1 CDS HPSNT_02445 NC_017376.1 491341 491448 R hypothetical protein complement(491341..491448) Helicobacter pylori SNT49 12366901 YP_005786636.1 CDS HPSNT_02450 NC_017376.1 491447 492556 D outer membrane protein HopK 491447..492556 Helicobacter pylori SNT49 12366902 YP_005786637.1 CDS HPSNT_02455 NC_017376.1 492565 494202 D COG0286 Type I restriction-modification system methyltransferase subunit; type II adenine specific methyltransferase 492565..494202 Helicobacter pylori SNT49 12366903 YP_005786638.1 CDS HPSNT_02460 NC_017376.1 494168 495016 D COG0859 ADP-heptose:LPS heptosyltransferase; type II adenine specific methyltransferase 494168..495016 Helicobacter pylori SNT49 12366904 YP_005786639.1 CDS HPSNT_02465 NC_017376.1 495062 496861 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA 495062..496861 Helicobacter pylori SNT49 12366905 YP_005786640.1 CDS HPSNT_02470 NC_017376.1 496877 497806 D COG0338 Site-specific DNA methylase; type II adenine specific DNA methyltransferase 496877..497806 Helicobacter pylori SNT49 12366906 YP_005786641.1 CDS HPSNT_02475 NC_017376.1 497809 498432 D type II restriction endonuclease 497809..498432 Helicobacter pylori SNT49 12366907 YP_005786642.1 CDS HPSNT_02480 NC_017376.1 498523 499578 D COG0270 Site-specific DNA methylase; DNA (cytosine-5-)-methyltransferase 498523..499578 Helicobacter pylori SNT49 12366908 YP_005786643.1 CDS HPSNT_02485 NC_017376.1 499886 500320 D hypothetical protein 499886..500320 Helicobacter pylori SNT49 12366909 YP_005786644.1 CDS HPSNT_02490 NC_017376.1 500320 500412 D hypothetical protein 500320..500412 Helicobacter pylori SNT49 12366910 YP_005786645.1 CDS HPSNT_02495 NC_017376.1 500418 501362 R COG0753 Catalase; catalase-like protein complement(500418..501362) Helicobacter pylori SNT49 12366911 YP_005786646.1 CDS HPSNT_02500 NC_017376.1 501671 503257 D outer membrane protein HofC 501671..503257 Helicobacter pylori SNT49 12366912 YP_005786647.1 CDS HPSNT_02505 NC_017376.1 503331 504728 D outer membrane protein HofD 503331..504728 Helicobacter pylori SNT49 12366913 YP_005786648.1 CDS HPSNT_02510 NC_017376.1 505125 507926 D hypothetical protein 505125..507926 Helicobacter pylori SNT49 12366914 YP_005786649.1 CDS HPSNT_02515 NC_017376.1 508130 508450 D hypothetical protein 508130..508450 Helicobacter pylori SNT49 12366915 YP_005786650.1 CDS HPSNT_02520 NC_017376.1 508712 509848 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein complement(508712..509848) Helicobacter pylori SNT49 12366916 YP_005786651.1 CDS HPSNT_02525 NC_017376.1 509863 509988 R hypothetical protein complement(509863..509988) Helicobacter pylori SNT49 12366917 YP_005786652.1 CDS rpmB NC_017376.1 510031 510219 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(510031..510219) Helicobacter pylori SNT49 12366918 YP_005786653.1 CDS HPSNT_02535 NC_017376.1 510317 511159 R hypothetical protein complement(510317..511159) Helicobacter pylori SNT49 12366919 YP_005786654.1 CDS mraY NC_017376.1 511284 512345 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 511284..512345 Helicobacter pylori SNT49 12366920 YP_005786655.1 CDS murD NC_017376.1 512347 513615 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 512347..513615 Helicobacter pylori SNT49 12366921 YP_005786656.1 CDS HPSNT_02550 NC_017376.1 513612 513872 R hypothetical protein complement(513612..513872) Helicobacter pylori SNT49 12366922 YP_005786657.1 CDS HPSNT_02555 NC_017376.1 513862 514263 R COG0824 Predicted thioesterase; thioesterase complement(513862..514263) Helicobacter pylori SNT49 12366923 YP_005786658.1 CDS HPSNT_02560 NC_017376.1 514494 515822 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 514494..515822 Helicobacter pylori SNT49 12366924 YP_005786659.1 CDS HPSNT_02565 NC_017376.1 515833 517161 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 515833..517161 Helicobacter pylori SNT49 12366925 YP_005786660.1 CDS HPSNT_02570 NC_017376.1 517176 518243 D COG2829 Outer membrane phospholipase A; phospholipase A1 517176..518243 Helicobacter pylori SNT49 12366926 YP_005786661.1 CDS HPSNT_02575 NC_017376.1 518299 519423 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 518299..519423 Helicobacter pylori SNT49 12366927 YP_005786662.1 CDS gyrB NC_017376.1 519436 521757 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 519436..521757 Helicobacter pylori SNT49 12366928 YP_005786663.1 CDS HPSNT_02585 NC_017376.1 521803 522795 D COG1002 Type II restriction enzyme, methylase subunits; hypothetical protein 521803..522795 Helicobacter pylori SNT49 12366929 YP_005786664.1 CDS HPSNT_02600 NC_017376.1 523750 524961 D COG0739 Membrane proteins related to metalloendopeptidases; putative outer membrane protein 523750..524961 Helicobacter pylori SNT49 12366930 YP_005786665.1 CDS HPSNT_02605 NC_017376.1 524961 525599 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 524961..525599 Helicobacter pylori SNT49 12366931 YP_005786666.1 CDS HPSNT_02610 NC_017376.1 525610 526959 D plasminogen binding protein 525610..526959 Helicobacter pylori SNT49 12366932 YP_005786667.1 CDS HPSNT_02615 NC_017376.1 526961 528340 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit 526961..528340 Helicobacter pylori SNT49 12366933 YP_005786668.1 CDS HPSNT_02620 NC_017376.1 528363 529127 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 528363..529127 Helicobacter pylori SNT49 12366934 YP_005786669.1 CDS HPSNT_02625 NC_017376.1 529463 529579 D urease-enhancing factor 529463..529579 Helicobacter pylori SNT49 12366935 YP_005786670.1 CDS HPSNT_02630 NC_017376.1 529885 531330 R COG0174 Glutamine synthetase; glutamine synthetase complement(529885..531330) Helicobacter pylori SNT49 12366936 YP_005786671.1 CDS rplI NC_017376.1 533621 534070 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 533621..534070 Helicobacter pylori SNT49 12366937 YP_005786672.1 CDS HPSNT_02650 NC_017376.1 534074 534616 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 534074..534616 Helicobacter pylori SNT49 12366938 YP_005786673.1 CDS hslU NC_017376.1 534625 535947 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 534625..535947 Helicobacter pylori SNT49 12366939 YP_005786674.1 CDS era NC_017376.1 535947 536852 D COG1159 GTPase; GTPase Era 535947..536852 Helicobacter pylori SNT49 12366940 YP_005786675.1 CDS HPSNT_02665 NC_017376.1 536849 537841 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 536849..537841 Helicobacter pylori SNT49 12366941 YP_005786676.1 CDS HPSNT_02680 NC_017376.1 538913 539260 D cag pathogenicity island protein (cag1) 538913..539260 Helicobacter pylori SNT49 12366942 YP_005786677.1 CDS HPSNT_02685 NC_017376.1 539368 539730 D COG0551 Zn-finger domain associated with topoisomerase type I; cag pathogenicity island protein Epsilon 539368..539730 Helicobacter pylori SNT49 12366943 YP_005786678.1 CDS HPSNT_02690 NC_017376.1 539723 541168 D cag pathogenicity island protein (cag3) 539723..541168 Helicobacter pylori SNT49 12366944 YP_005786679.1 CDS HPSNT_02695 NC_017376.1 541178 541687 D cag pathogenicity island protein Gamma 541178..541687 Helicobacter pylori SNT49 12366945 YP_005786680.1 CDS HPSNT_02700 NC_017376.1 541825 544071 R COG3505 Type IV secretory pathway, VirD4 components; CAG pathogenicity island protein 5 complement(541825..544071) Helicobacter pylori SNT49 12366946 YP_005786681.1 CDS HPSNT_02705 NC_017376.1 544080 545072 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag pathogenicity island protein alpha complement(544080..545072) Helicobacter pylori SNT49 12366947 YP_005786682.1 CDS HPSNT_02710 NC_017376.1 545077 545676 R cag pathogenicity island protein Z complement(545077..545676) Helicobacter pylori SNT49 12366948 YP_005786683.1 CDS HPSNT_02715 NC_017376.1 545813 551206 R COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein (cag7) complement(545813..551206) Helicobacter pylori SNT49 12366949 YP_005786684.1 CDS HPSNT_02720 NC_017376.1 551221 552786 R COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein X complement(551221..552786) Helicobacter pylori SNT49 12366950 YP_005786685.1 CDS HPSNT_02725 NC_017376.1 552839 554446 R cag pathogenicity island protein W complement(552839..554446) Helicobacter pylori SNT49 12366951 YP_005786686.1 CDS HPSNT_02730 NC_017376.1 554451 555209 R COG3736 Type IV secretory pathway, component VirB8; cag island protein complement(554451..555209) Helicobacter pylori SNT49 12366952 YP_005786687.1 CDS HPSNT_02735 NC_017376.1 555590 556240 D cag pathogenicity island protein U 555590..556240 Helicobacter pylori SNT49 12366953 YP_005786688.1 CDS HPSNT_02740 NC_017376.1 556253 557095 D CAG pathogenicity island protein T 556253..557095 Helicobacter pylori SNT49 12366954 YP_005786689.1 CDS HPSNT_02745 NC_017376.1 557296 557895 R CAG pathogenicity island protein S complement(557296..557895) Helicobacter pylori SNT49 12366955 YP_005786690.1 CDS HPSNT_02750 NC_017376.1 558238 558441 D hypothetical protein 558238..558441 Helicobacter pylori SNT49 12366956 YP_005786691.1 CDS HPSNT_02755 NC_017376.1 559181 559276 R hypothetical protein complement(559181..559276) Helicobacter pylori SNT49 12366957 YP_005786692.1 CDS HPSNT_02760 NC_017376.1 559451 559573 R hypothetical protein complement(559451..559573) Helicobacter pylori SNT49 12366958 YP_005786693.1 CDS HPSNT_02765 NC_017376.1 560656 561786 D cag pathogenicity island protein M 560656..561786 Helicobacter pylori SNT49 12366959 YP_005786694.1 CDS HPSNT_02770 NC_017376.1 561801 562721 D cag pathogenicity island protein (cagN, cag17) 561801..562721 Helicobacter pylori SNT49 12366960 YP_005786695.1 CDS HPSNT_02775 NC_017376.1 562803 563516 R cag pathogenicity island protein (cag18) complement(562803..563516) Helicobacter pylori SNT49 12366961 YP_005786696.1 CDS HPSNT_02780 NC_017376.1 563513 564658 R cag pathogenicity island protein I complement(563513..564658) Helicobacter pylori SNT49 12366962 YP_005786697.1 CDS HPSNT_02785 NC_017376.1 564669 565781 R COG0249 Mismatch repair ATPase (MutS family); cag pathogenicity island protein H complement(564669..565781) Helicobacter pylori SNT49 12366963 YP_005786698.1 CDS HPSNT_02790 NC_017376.1 565798 566226 R cag pathogenicity island protein G complement(565798..566226) Helicobacter pylori SNT49 12366964 YP_005786699.1 CDS HPSNT_02795 NC_017376.1 566282 567088 R cag pathogenicity island protein (cagF, cag22) complement(566282..567088) Helicobacter pylori SNT49 12366965 YP_005786700.1 CDS HPSNT_02800 NC_017376.1 567090 570041 R COG3451 Type IV secretory pathway, VirB4 components; cag pathogenicity island protein E complement(567090..570041) Helicobacter pylori SNT49 12366966 YP_005786701.1 CDS HPSNT_02805 NC_017376.1 570050 570673 R cag pathogenicity island protein (cagD, cag24) complement(570050..570673) Helicobacter pylori SNT49 12366967 YP_005786702.1 CDS HPSNT_02810 NC_017376.1 570675 571022 R cag pathogenicity island protein C complement(570675..571022) Helicobacter pylori SNT49 12366968 YP_005786703.1 CDS HPSNT_02815 NC_017376.1 571189 571416 R cag pathogenicity island protein B complement(571189..571416) Helicobacter pylori SNT49 12366969 YP_005786704.1 CDS HPSNT_02820 NC_017376.1 571829 575386 D cytotoxin-associated protein A 571829..575386 Helicobacter pylori SNT49 12366970 YP_005786705.1 CDS HPSNT_02825 NC_017376.1 576138 576905 R COG0796 Glutamate racemase; glutamate racemase complement(576138..576905) Helicobacter pylori SNT49 12366971 YP_005786706.1 CDS rho NC_017376.1 576945 578261 R COG1158 Transcription termination factor; transcription termination factor Rho complement(576945..578261) Helicobacter pylori SNT49 12366972 YP_005786707.1 CDS rpmE NC_017376.1 578538 578741 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 578538..578741 Helicobacter pylori SNT49 12366973 YP_005786708.1 CDS HPSNT_02840 NC_017376.1 578766 579629 D COG0313 Predicted methyltransferases; putative methylase 578766..579629 Helicobacter pylori SNT49 12366974 YP_005786709.1 CDS HPSNT_02845 NC_017376.1 579642 580325 D COG0566 rRNA methylases; RNA methyltransferase 579642..580325 Helicobacter pylori SNT49 12366975 YP_005786710.1 CDS HPSNT_02850 NC_017376.1 580338 581300 D hypothetical protein 580338..581300 Helicobacter pylori SNT49 12366976 YP_005786711.1 CDS HPSNT_02855 NC_017376.1 581297 582118 D COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 581297..582118 Helicobacter pylori SNT49 12366977 YP_005786712.1 CDS HPSNT_02860 NC_017376.1 582186 582623 R hypothetical protein complement(582186..582623) Helicobacter pylori SNT49 12366978 YP_005786713.1 CDS HPSNT_02865 NC_017376.1 582832 583026 D hypothetical protein 582832..583026 Helicobacter pylori SNT49 12366979 YP_005786714.1 CDS HPSNT_02870 NC_017376.1 583093 584031 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(583093..584031) Helicobacter pylori SNT49 12366980 YP_005786715.1 CDS HPSNT_02875 NC_017376.1 584054 585292 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(584054..585292) Helicobacter pylori SNT49 12366981 YP_005786716.1 CDS acpP NC_017376.1 585395 585631 R COG0236 Acyl carrier protein; acyl carrier protein complement(585395..585631) Helicobacter pylori SNT49 12366982 YP_005786717.1 CDS fabG NC_017376.1 585862 586605 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(585862..586605) Helicobacter pylori SNT49 12366983 YP_005786718.1 CDS rpsU NC_017376.1 586644 586856 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(586644..586856) Helicobacter pylori SNT49 12366984 YP_005786719.1 CDS HPSNT_02895 NC_017376.1 586957 588207 R hypothetical protein complement(586957..588207) Helicobacter pylori SNT49 12366985 YP_005786720.1 CDS HPSNT_02900 NC_017376.1 588379 588624 D hypothetical protein 588379..588624 Helicobacter pylori SNT49 12366986 YP_005786721.1 CDS HPSNT_02905 NC_017376.1 588648 589295 R COG3059 Predicted membrane protein; hypothetical protein complement(588648..589295) Helicobacter pylori SNT49 12366987 YP_005786722.1 CDS dapF NC_017376.1 589402 590223 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(589402..590223) Helicobacter pylori SNT49 12366988 YP_005786723.1 CDS HPSNT_02915 NC_017376.1 590338 591384 D COG0628 Predicted permease; outer membrane protein 590338..591384 Helicobacter pylori SNT49 12366989 YP_005786724.1 CDS HPSNT_02920 NC_017376.1 591528 592295 R hypothetical protein complement(591528..592295) Helicobacter pylori SNT49 12366990 YP_005786725.1 CDS HPSNT_02925 NC_017376.1 592439 593539 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(592439..593539) Helicobacter pylori SNT49 12366991 YP_005786726.1 CDS HPSNT_02930 NC_017376.1 593541 595031 R COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A complement(593541..595031) Helicobacter pylori SNT49 12366992 YP_005786727.1 CDS HPSNT_02935 NC_017376.1 595079 595657 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(595079..595657) Helicobacter pylori SNT49 12366993 YP_005786728.1 CDS HPSNT_02940 NC_017376.1 595672 596211 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(595672..596211) Helicobacter pylori SNT49 12366994 YP_005786729.1 CDS HPSNT_02945 NC_017376.1 596269 596601 R hypothetical protein complement(596269..596601) Helicobacter pylori SNT49 12366995 YP_005786730.1 CDS HPSNT_02950 NC_017376.1 596647 597108 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(596647..597108) Helicobacter pylori SNT49 12366996 YP_005786731.1 CDS HPSNT_02955 NC_017376.1 597129 597827 R COG1994 Zn-dependent proteases; membrane protein complement(597129..597827) Helicobacter pylori SNT49 12366997 YP_005786732.1 CDS HPSNT_02960 NC_017376.1 597836 598708 R COG0681 Signal peptidase I; signal peptidase I (lepB) complement(597836..598708) Helicobacter pylori SNT49 12366998 YP_005786733.1 CDS HPSNT_02965 NC_017376.1 598709 599581 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(598709..599581) Helicobacter pylori SNT49 12366999 YP_005786734.1 CDS HPSNT_02970 NC_017376.1 599660 601705 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein complement(599660..601705) Helicobacter pylori SNT49 12367000 YP_005786735.1 CDS HPSNT_02975 NC_017376.1 601711 602265 R hypothetical protein complement(601711..602265) Helicobacter pylori SNT49 12367001 YP_005786736.1 CDS HPSNT_02980 NC_017376.1 602272 603390 R COG4692 Predicted neuraminidase (sialidase); hypothetical protein complement(602272..603390) Helicobacter pylori SNT49 12367002 YP_005786737.1 CDS HPSNT_02985 NC_017376.1 603366 604385 R COG0418 Dihydroorotase; dihydroorotase complement(603366..604385) Helicobacter pylori SNT49 12367003 YP_005786738.1 CDS HPSNT_02990 NC_017376.1 604389 605360 R COG0810 Periplasmic protein TonB, links inner and outer membranes; hypothetical protein complement(604389..605360) Helicobacter pylori SNT49 12367004 YP_005786739.1 CDS HPSNT_02995 NC_017376.1 605344 606210 R hypothetical protein complement(605344..606210) Helicobacter pylori SNT49 12367005 YP_005786740.1 CDS HPSNT_03000 NC_017376.1 606222 606593 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(606222..606593) Helicobacter pylori SNT49 12367006 YP_005786741.1 CDS HPSNT_03005 NC_017376.1 606675 607325 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(606675..607325) Helicobacter pylori SNT49 12367007 YP_005786742.1 CDS HPSNT_03010 NC_017376.1 607322 607558 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(607322..607558) Helicobacter pylori SNT49 12367008 YP_005786743.1 CDS HPSNT_03015 NC_017376.1 607560 610493 R hypothetical protein complement(607560..610493) Helicobacter pylori SNT49 12367009 YP_005786744.1 CDS HPSNT_03020 NC_017376.1 610411 611400 D COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase (pabC) 610411..611400 Helicobacter pylori SNT49 12367010 YP_005786745.1 CDS oorD NC_017376.1 611585 611926 D COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 611585..611926 Helicobacter pylori SNT49 12367011 YP_005786746.1 CDS oorA NC_017376.1 611926 613053 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 611926..613053 Helicobacter pylori SNT49 12367012 YP_005786747.1 CDS oorB NC_017376.1 613055 613876 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 613055..613876 Helicobacter pylori SNT49 12367013 YP_005786748.1 CDS oorC NC_017376.1 613876 614436 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 613876..614436 Helicobacter pylori SNT49 12367014 YP_005786749.1 CDS HPSNT_03045 NC_017376.1 614598 617543 D COG3587 Restriction endonuclease; type IIIR-M system restriction enzyme 614598..617543 Helicobacter pylori SNT49 12367015 YP_005786750.1 CDS HPSNT_03050 NC_017376.1 617540 619489 D COG2189 Adenine specific DNA methylase Mod; adenine specific DNA methyltransferase 617540..619489 Helicobacter pylori SNT49 12367016 YP_005786751.1 CDS HPSNT_03055 NC_017376.1 619596 619760 D hypothetical protein 619596..619760 Helicobacter pylori SNT49 12367017 YP_005786752.1 CDS HPSNT_03060 NC_017376.1 619769 621241 D COG1495 Disulfide bond formation protein DsbB; DsbB-like protein 619769..621241 Helicobacter pylori SNT49 12367018 YP_005786753.1 CDS HPSNT_03065 NC_017376.1 621716 622294 D tumor necrosis factor alpha-inducing protein 621716..622294 Helicobacter pylori SNT49 12367019 YP_005786754.1 CDS HPSNT_03070 NC_017376.1 622297 624276 R PBP-1A; COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1A complement(622297..624276) Helicobacter pylori SNT49 12367020 YP_005786755.1 CDS HPSNT_03075 NC_017376.1 624277 625398 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(624277..625398) Helicobacter pylori SNT49 12367021 YP_005786756.1 CDS HPSNT_03080 NC_017376.1 625421 626722 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transmembrane sensory protein (MCP-like protein) complement(625421..626722) Helicobacter pylori SNT49 12367022 YP_005786757.1 CDS HPSNT_03085 NC_017376.1 626794 627387 R COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance protein complement(626794..627387) Helicobacter pylori SNT49 12367023 YP_005786758.1 CDS HPSNT_03090 NC_017376.1 627590 627829 R hypothetical protein complement(627590..627829) Helicobacter pylori SNT49 12367024 YP_005786759.1 CDS HPSNT_03095 NC_017376.1 627814 627915 R hypothetical protein complement(627814..627915) Helicobacter pylori SNT49 12367025 YP_005786760.1 CDS HPSNT_03100 NC_017376.1 628036 629568 D COG1344 Flagellin and related hook-associated proteins; flagellin A 628036..629568 Helicobacter pylori SNT49 12367026 YP_005786761.1 CDS HPSNT_03105 NC_017376.1 629685 630341 D COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 629685..630341 Helicobacter pylori SNT49 12367027 YP_005786762.1 CDS HPSNT_03110 NC_017376.1 630323 630955 D hypothetical protein 630323..630955 Helicobacter pylori SNT49 12367028 YP_005786763.1 CDS hemE NC_017376.1 631024 632043 D COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 631024..632043 Helicobacter pylori SNT49 12367029 YP_005786764.1 CDS HPSNT_03120 NC_017376.1 632052 633485 D COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system 632052..633485 Helicobacter pylori SNT49 12367030 YP_005786765.1 CDS HPSNT_03125 NC_017376.1 633496 634200 D COG0845 Membrane-fusion protein; membrane fusion protein of the hefABC efflux system HefB 633496..634200 Helicobacter pylori SNT49 12367031 YP_005786766.1 CDS HPSNT_03130 NC_017376.1 634213 637293 D COG0841 Cation/multidrug efflux pump; cytoplasmic pump protein of the HefABC efflux system HefC 634213..637293 Helicobacter pylori SNT49 12367032 YP_005786767.1 CDS HPSNT_03135 NC_017376.1 637290 637859 D COG0015 Adenylosuccinate lyase; hypothetical protein 637290..637859 Helicobacter pylori SNT49 12367033 YP_005786768.1 CDS HPSNT_03140 NC_017376.1 638026 647601 D vacuolating cytotoxin VacA-like protein 638026..647601 Helicobacter pylori SNT49 12367034 YP_005786769.1 CDS HPSNT_03145 NC_017376.1 647661 648416 R COG0842 ABC-type multidrug transport system, permease component; putative ABC transporter permease complement(647661..648416) Helicobacter pylori SNT49 12367035 YP_005786770.1 CDS HPSNT_03150 NC_017376.1 648416 649117 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(648416..649117) Helicobacter pylori SNT49 12367036 YP_005786771.1 CDS HPSNT_03155 NC_017376.1 649114 649314 R hypothetical protein complement(649114..649314) Helicobacter pylori SNT49 12367037 YP_005786772.1 CDS HPSNT_03160 NC_017376.1 649428 649760 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; hypothetical protein complement(649428..649760) Helicobacter pylori SNT49 12367038 YP_005786773.1 CDS ligA NC_017376.1 649886 651856 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(649886..651856) Helicobacter pylori SNT49 12367039 YP_005786774.1 CDS HPSNT_03170 NC_017376.1 651934 652875 D COG0835 Chemotaxis signal transduction protein; putative chemotaxis protein 651934..652875 Helicobacter pylori SNT49 12367040 YP_005786775.1 CDS aspS NC_017376.1 652910 654643 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 652910..654643 Helicobacter pylori SNT49 12367041 YP_005786776.1 CDS adk NC_017376.1 654660 655235 D COG0563 Adenylate kinase and related kinases; adenylate kinase 654660..655235 Helicobacter pylori SNT49 12367042 YP_005786777.1 CDS HPSNT_03185 NC_017376.1 655261 656274 D COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase 655261..656274 Helicobacter pylori SNT49 12367043 YP_005786778.1 CDS HPSNT_03190 NC_017376.1 656330 656851 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 656330..656851 Helicobacter pylori SNT49 12367044 YP_005786779.1 CDS HPSNT_03195 NC_017376.1 657002 659254 R COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein complement(657002..659254) Helicobacter pylori SNT49 12367045 YP_005786780.1 CDS HPSNT_03200 NC_017376.1 659251 659628 R hypothetical protein complement(659251..659628) Helicobacter pylori SNT49 12367046 YP_005786781.1 CDS murC NC_017376.1 659628 660977 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(659628..660977) Helicobacter pylori SNT49 12367047 YP_005786782.1 CDS HPSNT_03210 NC_017376.1 660970 662097 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(660970..662097) Helicobacter pylori SNT49 12367048 YP_005786783.1 CDS ispG NC_017376.1 662251 663330 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 662251..663330 Helicobacter pylori SNT49 12367049 YP_005786784.1 CDS HPSNT_03220 NC_017376.1 663333 664538 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 663333..664538 Helicobacter pylori SNT49 12367050 YP_005786785.1 CDS HPSNT_03225 NC_017376.1 664550 665608 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 664550..665608 Helicobacter pylori SNT49 12367051 YP_005786786.1 CDS HPSNT_03230 NC_017376.1 665889 667781 D COG1479 Uncharacterized conserved protein; hypothetical protein 665889..667781 Helicobacter pylori SNT49 12367052 YP_005786787.1 CDS HPSNT_03235 NC_017376.1 667839 668423 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); modulator of drug activity B complement(667839..668423) Helicobacter pylori SNT49 12367053 YP_005786788.1 CDS HPSNT_03240 NC_017376.1 668401 668613 R hypothetical protein complement(668401..668613) Helicobacter pylori SNT49 12367054 YP_005786789.1 CDS HPSNT_03245 NC_017376.1 668584 669738 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase (NiFe) small subunit HydA 668584..669738 Helicobacter pylori SNT49 12367055 YP_005786790.1 CDS HPSNT_03250 NC_017376.1 669748 671484 D COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 669748..671484 Helicobacter pylori SNT49 12367056 YP_005786791.1 CDS HPSNT_03255 NC_017376.1 671497 672171 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 671497..672171 Helicobacter pylori SNT49 12367057 YP_005786792.1 CDS HPSNT_03260 NC_017376.1 672168 672704 D COG0680 Ni,Fe-hydrogenase maturation factor; Hydrogenase expression/formation protein 672168..672704 Helicobacter pylori SNT49 12367058 YP_005786793.1 CDS HPSNT_03265 NC_017376.1 672706 674247 D hypothetical protein 672706..674247 Helicobacter pylori SNT49 12367059 YP_005786794.1 CDS HPSNT_03270 NC_017376.1 674252 674608 R hypothetical protein complement(674252..674608) Helicobacter pylori SNT49 12367060 YP_005786795.1 CDS HPSNT_03275 NC_017376.1 674683 675135 R hypothetical protein complement(674683..675135) Helicobacter pylori SNT49 12367061 YP_005786796.1 CDS HPSNT_03280 NC_017376.1 675319 676242 D outer membrane protein HopH 675319..676242 Helicobacter pylori SNT49 12367062 YP_005786797.1 CDS HPSNT_03285 NC_017376.1 676286 676966 R COG0603 Predicted PP-loop superfamily ATPase; ExsB trans-regulatory protein complement(676286..676966) Helicobacter pylori SNT49 12367063 YP_005786798.1 CDS HPSNT_03290 NC_017376.1 677029 678282 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase 677029..678282 Helicobacter pylori SNT49 12367064 YP_005786799.1 CDS HPSNT_03295 NC_017376.1 678260 678754 D hypothetical protein 678260..678754 Helicobacter pylori SNT49 12367065 YP_005786800.1 CDS HPSNT_03300 NC_017376.1 678769 679626 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyacid dehydrogenase 678769..679626 Helicobacter pylori SNT49 12367066 YP_005786801.1 CDS HPSNT_03305 NC_017376.1 679628 679744 D NAD(P)H-flavin oxidoreductase 679628..679744 Helicobacter pylori SNT49 12367067 YP_005786802.1 CDS HPSNT_03310 NC_017376.1 679723 680280 D COG0778 Nitroreductase; NAD(P)H-flavin oxidoreductase 679723..680280 Helicobacter pylori SNT49 12367068 YP_005786803.1 CDS HPSNT_03315 NC_017376.1 680445 681764 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase 680445..681764 Helicobacter pylori SNT49 12367069 YP_005786804.1 CDS HPSNT_03320 NC_017376.1 681761 682054 D COG0762 Predicted integral membrane protein; hypothetical protein 681761..682054 Helicobacter pylori SNT49 12367070 YP_005786805.1 CDS HPSNT_03325 NC_017376.1 682063 683745 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); soluble lytic murein transglycosylase 682063..683745 Helicobacter pylori SNT49 12367071 YP_005786806.1 CDS HPSNT_03330 NC_017376.1 683742 684563 D COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 683742..684563 Helicobacter pylori SNT49 12367072 YP_005786807.1 CDS HPSNT_03335 NC_017376.1 684575 684982 D hypothetical protein 684575..684982 Helicobacter pylori SNT49 12367073 YP_005786808.1 CDS HPSNT_03340 NC_017376.1 684985 686253 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 684985..686253 Helicobacter pylori SNT49 12367074 YP_005786809.1 CDS aspA NC_017376.1 686311 687717 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 686311..687717 Helicobacter pylori SNT49 12367075 YP_005786810.1 CDS HPSNT_03350 NC_017376.1 687774 688352 D COG1573 Uracil-DNA glycosylase; hypothetical protein 687774..688352 Helicobacter pylori SNT49 12367076 YP_005786811.1 CDS HPSNT_03355 NC_017376.1 688361 689740 R alpha1,3-fucosyl transferase complement(688361..689740) Helicobacter pylori SNT49 12367077 YP_005786812.1 CDS HPSNT_03360 NC_017376.1 689780 690403 R COG0560 Phosphoserine phosphatase; phosphoserine phosphatase complement(689780..690403) Helicobacter pylori SNT49 12367078 YP_005786813.1 CDS HPSNT_03365 NC_017376.1 690419 690922 R COG1528 Ferritin-like protein; ferritin complement(690419..690922) Helicobacter pylori SNT49 12367079 YP_005786814.1 CDS HPSNT_03370 NC_017376.1 691234 692316 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 691234..692316 Helicobacter pylori SNT49 12367080 YP_005786815.1 CDS HPSNT_03375 NC_017376.1 692489 695134 D COG4775 Outer membrane protein/protective antigen OMA87; protective surface antigen D15 692489..695134 Helicobacter pylori SNT49 12367081 YP_005786816.1 CDS HPSNT_03380 NC_017376.1 695136 696197 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 695136..696197 Helicobacter pylori SNT49 12367082 YP_005786817.1 CDS HPSNT_03385 NC_017376.1 696203 697501 D COG0612 Predicted Zn-dependent peptidases; processing protease (ymxG) 696203..697501 Helicobacter pylori SNT49 12367083 YP_005786818.1 CDS gatB NC_017376.1 697501 698925 D COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 697501..698925 Helicobacter pylori SNT49 12367084 YP_005786819.1 CDS HPSNT_03395 NC_017376.1 698925 700169 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 698925..700169 Helicobacter pylori SNT49 12367085 YP_005786820.1 CDS HPSNT_03400 NC_017376.1 700181 701197 D hypothetical protein 700181..701197 Helicobacter pylori SNT49 12367086 YP_005786821.1 CDS rnhA NC_017376.1 701184 701615 D COG0328 Ribonuclease HI; ribonuclease H 701184..701615 Helicobacter pylori SNT49 12367087 YP_005786822.1 CDS rnc NC_017376.1 701627 702346 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 701627..702346 Helicobacter pylori SNT49 12367088 YP_005786823.1 CDS HPSNT_03415 NC_017376.1 702343 703440 D COG0082 Chorismate synthase; chorismate synthase 702343..703440 Helicobacter pylori SNT49 12367089 YP_005786824.1 CDS HPSNT_03420 NC_017376.1 703477 703992 D hypothetical protein 703477..703992 Helicobacter pylori SNT49 12367090 YP_005786825.1 CDS HPSNT_03425 NC_017376.1 703992 705365 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 703992..705365 Helicobacter pylori SNT49 12367091 YP_005786826.1 CDS HPSNT_03430 NC_017376.1 705362 706654 D COG0247 Fe-S oxidoreductase; anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) 705362..706654 Helicobacter pylori SNT49 12367092 YP_005786827.1 CDS HPSNT_03450 NC_017376.1 711382 712608 D COG0846 NAD-dependent protein deacetylases, SIR2 family; hypothetical protein 711382..712608 Helicobacter pylori SNT49 12367093 YP_005786828.1 CDS HPSNT_03455 NC_017376.1 712811 713863 D hypothetical protein 712811..713863 Helicobacter pylori SNT49 12367094 YP_005786829.1 CDS HPSNT_03460 NC_017376.1 713820 714029 D hypothetical protein 713820..714029 Helicobacter pylori SNT49 12367095 YP_005786830.1 CDS HPSNT_03465 NC_017376.1 714083 714895 D outer membrane protein HorF 714083..714895 Helicobacter pylori SNT49 12367096 YP_005786831.1 CDS HPSNT_03470 NC_017376.1 715054 716226 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase 715054..716226 Helicobacter pylori SNT49 12367097 YP_005786832.1 CDS HPSNT_03475 NC_017376.1 716210 716401 R hypothetical protein complement(716210..716401) Helicobacter pylori SNT49 12367098 YP_005786833.1 CDS HPSNT_03490 NC_017376.1 718146 719213 D COG0582 Integrase; phage integrase family site specific recombinase 718146..719213 Helicobacter pylori SNT49 12367099 YP_005786834.1 CDS HPSNT_03495 NC_017376.1 719275 719781 R COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(719275..719781) Helicobacter pylori SNT49 12367100 YP_005786835.1 CDS HPSNT_03500 NC_017376.1 719785 720552 R COG0730 Predicted permeases; hypothetical protein complement(719785..720552) Helicobacter pylori SNT49 12367101 YP_005786836.1 CDS HPSNT_03505 NC_017376.1 720666 721613 R COG0673 Predicted dehydrogenases and related proteins; putative lipopolysaccharide biosynthesis protein complement(720666..721613) Helicobacter pylori SNT49 12367102 YP_005786837.1 CDS HPSNT_03510 NC_017376.1 721675 724041 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(721675..724041) Helicobacter pylori SNT49 12367103 YP_005786838.1 CDS HPSNT_03515 NC_017376.1 724212 724694 R hypothetical protein complement(724212..724694) Helicobacter pylori SNT49 12367104 YP_005786839.1 CDS HPSNT_03520 NC_017376.1 724718 725023 R hypothetical protein complement(724718..725023) Helicobacter pylori SNT49 12367105 YP_005786840.1 CDS glmU NC_017376.1 725286 726587 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(725286..726587) Helicobacter pylori SNT49 12367106 YP_005786841.1 CDS fliP NC_017376.1 726670 727416 D COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 726670..727416 Helicobacter pylori SNT49 12367107 YP_005786842.1 CDS HPSNT_03545 NC_017376.1 729949 731877 R COG0370 Fe2+ transport system protein B; ferrous iron transport protein B complement(729949..731877) Helicobacter pylori SNT49 12367108 YP_005786843.1 CDS HPSNT_03550 NC_017376.1 732020 732832 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 732020..732832 Helicobacter pylori SNT49 12367109 YP_005786844.1 CDS HPSNT_03555 NC_017376.1 733115 734290 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 733115..734290 Helicobacter pylori SNT49 12367110 YP_005786845.1 CDS HPSNT_03560 NC_017376.1 734303 735001 D COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A 734303..735001 Helicobacter pylori SNT49 12367111 YP_005786846.1 CDS HPSNT_03565 NC_017376.1 734998 735621 D COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B 734998..735621 Helicobacter pylori SNT49 12367112 YP_005786847.1 CDS HPSNT_03570 NC_017376.1 735640 737004 D COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter 735640..737004 Helicobacter pylori SNT49 12367113 YP_005786848.1 CDS HPSNT_03575 NC_017376.1 737128 738129 D COG3528 Uncharacterized protein conserved in bacteria; outer membrane protein 737128..738129 Helicobacter pylori SNT49 12367114 YP_005786849.1 CDS HPSNT_03580 NC_017376.1 738352 740493 D COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A (hyuA) 738352..740493 Helicobacter pylori SNT49 12367115 YP_005786850.1 CDS HPSNT_03585 NC_017376.1 740505 742802 D COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; N-methyl hydantoinase 740505..742802 Helicobacter pylori SNT49 12367116 YP_005786851.1 CDS HPSNT_03590 NC_017376.1 742819 743319 D COG4647 Acetone carboxylase, gamma subunit; acetone carboxylase subunit gamma 742819..743319 Helicobacter pylori SNT49 12367117 YP_005786852.1 CDS HPSNT_03595 NC_017376.1 743499 743690 D COG1479 Uncharacterized conserved protein; hypothetical protein 743499..743690 Helicobacter pylori SNT49 12367118 YP_005786853.1 CDS HPSNT_03600 NC_017376.1 743701 744729 D hypothetical protein 743701..744729 Helicobacter pylori SNT49 12367119 YP_005786854.1 CDS HPSNT_03605 NC_017376.1 744722 745108 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 744722..745108 Helicobacter pylori SNT49 12367120 YP_005786855.1 CDS HPSNT_03610 NC_017376.1 745128 747605 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 745128..747605 Helicobacter pylori SNT49 12367121 YP_005786856.1 CDS HPSNT_03615 NC_017376.1 747605 748078 D hypothetical protein 747605..748078 Helicobacter pylori SNT49 12367122 YP_005786857.1 CDS HPSNT_03620 NC_017376.1 748075 749220 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; transcriptional activator of flagella proteins 748075..749220 Helicobacter pylori SNT49 12367123 YP_005786858.1 CDS HPSNT_03625 NC_017376.1 749392 749682 D hypothetical protein 749392..749682 Helicobacter pylori SNT49 12367124 YP_005786859.1 CDS HPSNT_03640 NC_017376.1 750233 750358 R hypothetical protein complement(750233..750358) Helicobacter pylori SNT49 12367125 YP_005786860.1 CDS uvrA NC_017376.1 750423 753248 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(750423..753248) Helicobacter pylori SNT49 12367126 YP_005786861.1 CDS HPSNT_03650 NC_017376.1 753413 754234 D outer membrane protein HopE 753413..754234 Helicobacter pylori SNT49 12367127 YP_005786862.1 CDS HPSNT_03655 NC_017376.1 754265 754453 R hypothetical protein complement(754265..754453) Helicobacter pylori SNT49 12367128 YP_005786863.1 CDS HPSNT_03660 NC_017376.1 754412 755338 D COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltranserfase 754412..755338 Helicobacter pylori SNT49 12367129 YP_005786864.1 CDS HPSNT_03665 NC_017376.1 755360 755704 D hypothetical protein 755360..755704 Helicobacter pylori SNT49 12367130 YP_005786865.1 CDS HPSNT_03670 NC_017376.1 755910 756812 D COG1912 Uncharacterized conserved protein; hypothetical protein 755910..756812 Helicobacter pylori SNT49 12367131 YP_005786866.1 CDS HPSNT_03675 NC_017376.1 757038 759113 D outer membrane protein HomA 757038..759113 Helicobacter pylori SNT49 12367132 YP_005786867.1 CDS HPSNT_03680 NC_017376.1 759225 759317 R hypothetical protein complement(759225..759317) Helicobacter pylori SNT49 12367133 YP_005786868.1 CDS HPSNT_03685 NC_017376.1 759303 760523 D COG1896 Predicted hydrolases of HD superfamily; hypothetical protein 759303..760523 Helicobacter pylori SNT49 12367134 YP_005786869.1 CDS HPSNT_03690 NC_017376.1 760533 760637 R hypothetical protein complement(760533..760637) Helicobacter pylori SNT49 12367135 YP_005786870.1 CDS HPSNT_03695 NC_017376.1 760634 761878 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(760634..761878) Helicobacter pylori SNT49 12367136 YP_005786871.1 CDS HPSNT_03700 NC_017376.1 761881 762603 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(761881..762603) Helicobacter pylori SNT49 12367137 YP_005786872.1 CDS HPSNT_03705 NC_017376.1 762616 763017 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(762616..763017) Helicobacter pylori SNT49 12367138 YP_005786873.1 CDS HPSNT_03710 NC_017376.1 763014 764711 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(763014..764711) Helicobacter pylori SNT49 12367139 YP_005786874.1 CDS HPSNT_03715 NC_017376.1 764781 765413 R COG1279 Lysine efflux permease; L-lysine exporter; membrane protein complement(764781..765413) Helicobacter pylori SNT49 12367140 YP_005786875.1 CDS HPSNT_03720 NC_017376.1 765677 766099 D hypothetical protein 765677..766099 Helicobacter pylori SNT49 12367141 YP_005786876.1 CDS HPSNT_03725 NC_017376.1 766128 766598 D hypothetical protein 766128..766598 Helicobacter pylori SNT49 12367142 YP_005786877.1 CDS HPSNT_03730 NC_017376.1 766991 768838 D outer membrane protein 766991..768838 Helicobacter pylori SNT49 12367143 YP_005786878.1 CDS HPSNT_03735 NC_017376.1 768914 770242 R COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter complement(768914..770242) Helicobacter pylori SNT49 12367144 YP_005786879.1 CDS HPSNT_03740 NC_017376.1 770374 771372 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 770374..771372 Helicobacter pylori SNT49 12367145 YP_005786880.1 CDS HPSNT_03745 NC_017376.1 771512 773422 R outer membrane protein HopP complement(771512..773422) Helicobacter pylori SNT49 12367146 YP_005786881.1 CDS HPSNT_03750 NC_017376.1 773690 774607 R outer membrane protein complement(773690..774607) Helicobacter pylori SNT49 12367147 YP_005786882.1 CDS HPSNT_03755 NC_017376.1 774577 775563 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(774577..775563) Helicobacter pylori SNT49 12367148 YP_005786883.1 CDS HPSNT_03760 NC_017376.1 775639 776682 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(775639..776682) Helicobacter pylori SNT49 12367149 YP_005786884.1 CDS HPSNT_03765 NC_017376.1 776705 777772 R hypothetical protein complement(776705..777772) Helicobacter pylori SNT49 12367150 YP_005786885.1 CDS HPSNT_03770 NC_017376.1 777781 778086 R hypothetical protein complement(777781..778086) Helicobacter pylori SNT49 12367151 YP_005786886.1 CDS HPSNT_03775 NC_017376.1 778007 778159 D hypothetical protein 778007..778159 Helicobacter pylori SNT49 12367152 YP_005786887.1 CDS HPSNT_03780 NC_017376.1 778167 779879 R COG0218 Predicted GTPase; hypothetical protein complement(778167..779879) Helicobacter pylori SNT49 12367153 YP_005786888.1 CDS HPSNT_03785 NC_017376.1 779879 780712 R COG0127 Xanthosine triphosphate pyrophosphatase; hypothetical protein complement(779879..780712) Helicobacter pylori SNT49 12367154 YP_005786889.1 CDS HPSNT_03790 NC_017376.1 780739 781281 R hypothetical protein complement(780739..781281) Helicobacter pylori SNT49 12367155 YP_005786890.1 CDS HPSNT_03795 NC_017376.1 781324 782643 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(781324..782643) Helicobacter pylori SNT49 12367156 YP_005786891.1 CDS HPSNT_03800 NC_017376.1 782645 783106 R COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase complement(782645..783106) Helicobacter pylori SNT49 12367157 YP_005786892.1 CDS HPSNT_03805 NC_017376.1 783115 784224 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase complement(783115..784224) Helicobacter pylori SNT49 12367158 YP_005786893.1 CDS HPSNT_03810 NC_017376.1 784373 784849 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidyl glycerophosphatase A 784373..784849 Helicobacter pylori SNT49 12367159 YP_005786894.1 CDS ddl NC_017376.1 784926 785969 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 784926..785969 Helicobacter pylori SNT49 12367160 YP_005786895.1 CDS HPSNT_03820 NC_017376.1 785969 786694 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 785969..786694 Helicobacter pylori SNT49 12367161 YP_005786896.1 CDS HPSNT_03825 NC_017376.1 786681 788162 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-murnac-pentapeptide presynthetase 786681..788162 Helicobacter pylori SNT49 12367162 YP_005786897.1 CDS HPSNT_03830 NC_017376.1 788172 788657 D COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; HIT family protein 788172..788657 Helicobacter pylori SNT49 12367163 YP_005786898.1 CDS HPSNT_03835 NC_017376.1 788749 789678 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 788749..789678 Helicobacter pylori SNT49 12367164 YP_005786899.1 CDS HPSNT_03840 NC_017376.1 789758 790903 R COG0772 Bacterial cell division membrane protein; Rod shape-determining protein RodA; putative membrane protein complement(789758..790903) Helicobacter pylori SNT49 12367166 YP_005786900.1 CDS HPSNT_03845 NC_017376.1 790927 791700 R COG3597 Uncharacterized protein/domain associated with GTPases; hypothetical protein complement(790927..791700) Helicobacter pylori SNT49 12367167 YP_005786901.1 CDS HPSNT_03850 NC_017376.1 791703 791822 R hypothetical protein complement(791703..791822) Helicobacter pylori SNT49 12367168 YP_005786902.1 CDS HPSNT_03855 NC_017376.1 791960 792943 D COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase D 791960..792943 Helicobacter pylori SNT49 12367169 YP_005786903.1 CDS HPSNT_03860 NC_017376.1 792894 794153 D COG3401 Fibronectin type 3 domain-containing protein; hypothetical protein 792894..794153 Helicobacter pylori SNT49 12367170 YP_005786904.1 CDS HPSNT_03865 NC_017376.1 794164 795345 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 794164..795345 Helicobacter pylori SNT49 12367171 YP_005786905.1 CDS HPSNT_03870 NC_017376.1 795342 796013 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; cell division protein FtsE 795342..796013 Helicobacter pylori SNT49 12367172 YP_005786906.1 CDS HPSNT_03875 NC_017376.1 796000 796806 D COG2177 Cell division protein; cell division protein FtsX 796000..796806 Helicobacter pylori SNT49 12367173 YP_005786907.1 CDS HPSNT_03880 NC_017376.1 796799 798001 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 796799..798001 Helicobacter pylori SNT49 12367174 YP_005786908.1 CDS HPSNT_03885 NC_017376.1 798100 798459 D COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 798100..798459 Helicobacter pylori SNT49 12367175 YP_005786909.1 CDS fliD NC_017376.1 798476 800533 D COG1345 Flagellar capping protein; flagellar capping protein 798476..800533 Helicobacter pylori SNT49 12367176 YP_005786910.1 CDS fliS NC_017376.1 800575 800955 D COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 800575..800955 Helicobacter pylori SNT49 12367177 YP_005786911.1 CDS HPSNT_03900 NC_017376.1 800942 801181 D hypothetical protein 800942..801181 Helicobacter pylori SNT49 12367178 YP_005786912.1 CDS HPSNT_03905 NC_017376.1 801235 801894 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; molybdenum biosynthesis cofactor, MoeB/ThiF family protein 801235..801894 Helicobacter pylori SNT49 12367179 YP_005786913.1 CDS HPSNT_03910 NC_017376.1 801923 802072 D hypothetical protein 801923..802072 Helicobacter pylori SNT49 12367180 YP_005786914.1 CDS HPSNT_03915 NC_017376.1 802076 802954 D COG0388 Predicted amidohydrolase; beta-alanine synthetase-like protein 802076..802954 Helicobacter pylori SNT49 12367181 YP_005786915.1 CDS HPSNT_03920 NC_017376.1 803010 803093 D hypothetical protein 803010..803093 Helicobacter pylori SNT49 12367182 YP_005786916.1 CDS HPSNT_03925 NC_017376.1 803087 804400 D COG2056 Predicted permease; hypothetical protein 803087..804400 Helicobacter pylori SNT49 12367183 YP_005786917.1 CDS HPSNT_03930 NC_017376.1 804463 805716 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 804463..805716 Helicobacter pylori SNT49 12367184 YP_005786918.1 CDS HPSNT_03935 NC_017376.1 805717 807306 R COG1418 Predicted HD superfamily hydrolase; phosphodiesterase complement(805717..807306) Helicobacter pylori SNT49 12367185 YP_005786919.1 CDS HPSNT_03940 NC_017376.1 807206 807853 R COG0212 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(807206..807853) Helicobacter pylori SNT49 12367186 YP_005786920.1 CDS HPSNT_03945 NC_017376.1 807978 808535 D hypothetical protein 807978..808535 Helicobacter pylori SNT49 12367187 YP_005786921.1 CDS HPSNT_03950 NC_017376.1 808542 809435 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 808542..809435 Helicobacter pylori SNT49 12367188 YP_005786922.1 CDS HPSNT_03955 NC_017376.1 809612 809752 R hypothetical protein complement(809612..809752) Helicobacter pylori SNT49 12367189 YP_005786923.1 CDS HPSNT_03960 NC_017376.1 809845 811092 R COG3941 Mu-like prophage protein; hypothetical protein complement(809845..811092) Helicobacter pylori SNT49 12367190 YP_005786924.1 CDS moaA NC_017376.1 811395 812360 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(811395..812360) Helicobacter pylori SNT49 12367191 YP_005786925.1 CDS HPSNT_03970 NC_017376.1 812446 813051 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 812446..813051 Helicobacter pylori SNT49 12367192 YP_005786926.1 CDS flhB NC_017376.1 813044 814120 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 813044..814120 Helicobacter pylori SNT49 12367193 YP_005786927.1 CDS HPSNT_03980 NC_017376.1 814208 814945 R hypothetical protein complement(814208..814945) Helicobacter pylori SNT49 12367194 YP_005786928.1 CDS HPSNT_03985 NC_017376.1 814964 816295 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(814964..816295) Helicobacter pylori SNT49 12367195 YP_005786929.1 CDS HPSNT_03990 NC_017376.1 816302 817393 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; hypothetical protein complement(816302..817393) Helicobacter pylori SNT49 12367196 YP_005786930.1 CDS HPSNT_03995 NC_017376.1 817410 818618 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(817410..818618) Helicobacter pylori SNT49 12367197 YP_005786931.1 CDS HPSNT_04000 NC_017376.1 818642 820969 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) complement(818642..820969) Helicobacter pylori SNT49 12367198 YP_005786932.1 CDS rpoZ NC_017376.1 820956 821180 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(820956..821180) Helicobacter pylori SNT49 12367199 YP_005786933.1 CDS pyrH NC_017376.1 821222 821944 R COG0528 Uridylate kinase; uridylate kinase complement(821222..821944) Helicobacter pylori SNT49 12367200 YP_005786934.1 CDS HPSNT_04015 NC_017376.1 822050 822733 R COG1427 Predicted periplasmic solute-binding protein; hypothetical protein complement(822050..822733) Helicobacter pylori SNT49 12367201 YP_005786935.1 CDS HPSNT_04020 NC_017376.1 822858 825416 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 822858..825416 Helicobacter pylori SNT49 12367202 YP_005786936.1 CDS HPSNT_04025 NC_017376.1 825497 825763 D hypothetical protein 825497..825763 Helicobacter pylori SNT49 12367203 YP_005786937.1 CDS HPSNT_04030 NC_017376.1 825886 826020 R hypothetical protein complement(825886..826020) Helicobacter pylori SNT49 12367204 YP_005786938.1 CDS HPSNT_04035 NC_017376.1 826014 827303 D hypothetical protein 826014..827303 Helicobacter pylori SNT49 12367205 YP_005786939.1 CDS HPSNT_04040 NC_017376.1 827398 828765 D outermembrane protein HofE 827398..828765 Helicobacter pylori SNT49 12367206 YP_005786940.1 CDS HPSNT_04045 NC_017376.1 828772 829299 R hypothetical protein complement(828772..829299) Helicobacter pylori SNT49 12367207 YP_005786941.1 CDS lolA NC_017376.1 829792 830346 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(829792..830346) Helicobacter pylori SNT49 12367208 YP_005786942.1 CDS HPSNT_04055 NC_017376.1 830494 833091 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 830494..833091 Helicobacter pylori SNT49 12367209 YP_005786943.1 CDS HPSNT_04060 NC_017376.1 833081 834313 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein release system transmembrane protein 833081..834313 Helicobacter pylori SNT49 12367210 YP_005786944.1 CDS HPSNT_04065 NC_017376.1 834592 836091 D outer membrane protein HofF 834592..836091 Helicobacter pylori SNT49 12367211 YP_005786945.1 CDS HPSNT_04070 NC_017376.1 836122 836280 D hypothetical protein 836122..836280 Helicobacter pylori SNT49 12367212 YP_005786946.1 CDS HPSNT_04075 NC_017376.1 836281 836415 D hypothetical protein 836281..836415 Helicobacter pylori SNT49 12367213 YP_005786947.1 CDS HPSNT_04080 NC_017376.1 836467 837816 R COG0732 Restriction endonuclease S subunits; type I restriction enzyme subunit S complement(836467..837816) Helicobacter pylori SNT49 12367214 YP_005786948.1 CDS HPSNT_04085 NC_017376.1 837865 839925 R COG2217 Cation transport ATPase; Cadmium, zinc and cobalt-transporting ATPase complement(837865..839925) Helicobacter pylori SNT49 12367215 YP_005786949.1 CDS HPSNT_04090 NC_017376.1 839950 841470 R COG0606 Predicted ATPase with chaperone activity; Mg chelatase-related protein; ComM protein complement(839950..841470) Helicobacter pylori SNT49 12367216 YP_005786950.1 CDS def NC_017376.1 841476 842000 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(841476..842000) Helicobacter pylori SNT49 12367217 YP_005786951.1 CDS clpP NC_017376.1 842005 842592 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(842005..842592) Helicobacter pylori SNT49 12367218 YP_005786952.1 CDS tig NC_017376.1 842613 843968 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(842613..843968) Helicobacter pylori SNT49 12367219 YP_005786953.1 CDS HPSNT_04110 NC_017376.1 844080 844916 R outer membrane protein HorG complement(844080..844916) Helicobacter pylori SNT49 12367220 YP_005786954.1 CDS HPSNT_04115 NC_017376.1 844945 845727 R flagellar sheath adhesin HpaA complement(844945..845727) Helicobacter pylori SNT49 12367221 YP_005786955.1 CDS moaC NC_017376.1 845835 846323 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(845835..846323) Helicobacter pylori SNT49 12367222 YP_005786956.1 CDS mogA NC_017376.1 846332 846862 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(846332..846862) Helicobacter pylori SNT49 12367223 YP_005786957.1 CDS HPSNT_04130 NC_017376.1 846875 847312 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 complement(846875..847312) Helicobacter pylori SNT49 12367224 YP_005786958.1 CDS HPSNT_04135 NC_017376.1 847313 847534 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin converting factor subunit 1 complement(847313..847534) Helicobacter pylori SNT49 12367225 YP_005786959.1 CDS ribA NC_017376.1 847609 848187 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(847609..848187) Helicobacter pylori SNT49 12367226 YP_005786960.1 CDS HPSNT_04145 NC_017376.1 849145 849282 R hypothetical protein complement(849145..849282) Helicobacter pylori SNT49 12367227 YP_005786961.1 CDS HPSNT_04150 NC_017376.1 849360 850394 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(849360..850394) Helicobacter pylori SNT49 12367228 YP_005786962.1 CDS HPSNT_04155 NC_017376.1 850587 851438 R COG3306 Glycosyltransferase involved in LPS biosynthesis; lipooligosaccharide 5G8 epitope biosynthesis-associated protein complement(850587..851438) Helicobacter pylori SNT49 12367229 YP_005786963.1 CDS HPSNT_04160 NC_017376.1 851520 852140 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 851520..852140 Helicobacter pylori SNT49 12367230 YP_005786964.1 CDS HPSNT_04165 NC_017376.1 852143 854521 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron complex outermembrane recepter protein complement(852143..854521) Helicobacter pylori SNT49 12367231 YP_005786965.1 CDS acpS NC_017376.1 854720 855076 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(854720..855076) Helicobacter pylori SNT49 12367232 YP_005786966.1 CDS fliL NC_017376.1 855083 855634 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(855083..855634) Helicobacter pylori SNT49 12367233 YP_005786967.1 CDS HPSNT_04180 NC_017376.1 855643 856245 R COG0742 N6-adenine-specific methylase; hypothetical protein complement(855643..856245) Helicobacter pylori SNT49 12367234 YP_005786968.1 CDS HPSNT_04185 NC_017376.1 856224 856550 R hypothetical protein complement(856224..856550) Helicobacter pylori SNT49 12367235 YP_005786969.1 CDS HPSNT_04190 NC_017376.1 856996 858006 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(856996..858006) Helicobacter pylori SNT49 12367236 YP_005786970.1 CDS HPSNT_04195 NC_017376.1 858138 858755 D COG0491 Zn-dependent hydrolases, including glyoxylases; hypothetical protein 858138..858755 Helicobacter pylori SNT49 12367237 YP_005786971.1 CDS HPSNT_04200 NC_017376.1 858756 859523 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein (thiF) 858756..859523 Helicobacter pylori SNT49 12367238 YP_005786972.1 CDS HPSNT_04205 NC_017376.1 859539 860312 D COG1291 Flagellar motor component; flagellar motor protein MotA 859539..860312 Helicobacter pylori SNT49 12367239 YP_005786973.1 CDS motB NC_017376.1 860315 861088 D COG1360 Flagellar motor protein; flagellar motor protein MotB 860315..861088 Helicobacter pylori SNT49 12367240 YP_005786974.1 CDS HPSNT_04215 NC_017376.1 861094 861531 D hypothetical protein 861094..861531 Helicobacter pylori SNT49 12367241 YP_005786975.1 CDS HPSNT_04220 NC_017376.1 861600 861992 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; osmoprotection protein 861600..861992 Helicobacter pylori SNT49 12367242 YP_005786976.1 CDS HPSNT_04225 NC_017376.1 861961 862533 R hypothetical protein complement(861961..862533) Helicobacter pylori SNT49 12367243 YP_005786977.1 CDS HPSNT_04230 NC_017376.1 862527 863345 R COG0863 DNA modification methylase; DNA methylase complement(862527..863345) Helicobacter pylori SNT49 12367244 YP_005786978.1 CDS HPSNT_04235 NC_017376.1 863425 863526 D hypothetical protein 863425..863526 Helicobacter pylori SNT49 12367245 YP_005786979.1 CDS HPSNT_04240 NC_017376.1 863595 865256 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; osmoprotection protein (proWX) 863595..865256 Helicobacter pylori SNT49 12367246 YP_005786980.1 CDS HPSNT_04245 NC_017376.1 865260 865901 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection protein (proV) 865260..865901 Helicobacter pylori SNT49 12367247 YP_005786981.1 CDS HPSNT_04250 NC_017376.1 866084 866545 D hypothetical protein 866084..866545 Helicobacter pylori SNT49 12367248 YP_005786982.1 CDS uvrC NC_017376.1 866546 868330 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 866546..868330 Helicobacter pylori SNT49 12367249 YP_005786983.1 CDS HPSNT_04260 NC_017376.1 868341 869606 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 868341..869606 Helicobacter pylori SNT49 12367250 YP_005786984.1 CDS HPSNT_04265 NC_017376.1 869607 869951 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 869607..869951 Helicobacter pylori SNT49 12367251 YP_005786985.1 CDS HPSNT_04270 NC_017376.1 870040 870360 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 870040..870360 Helicobacter pylori SNT49 12367252 YP_005786986.1 CDS HPSNT_04275 NC_017376.1 870366 871301 D COG0492 Thioredoxin reductase; thioredoxin reductase 870366..871301 Helicobacter pylori SNT49 12367253 YP_005786987.1 CDS HPSNT_04280 NC_017376.1 871521 872342 D COG3306 Glycosyltransferase involved in LPS biosynthesis; lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) 871521..872342 Helicobacter pylori SNT49 12367254 YP_005786988.1 CDS HPSNT_04285 NC_017376.1 872542 872790 R COG0724 RNA-binding proteins (RRM domain); Nucleotide binding protein complement(872542..872790) Helicobacter pylori SNT49 12367255 YP_005786989.1 CDS HPSNT_04290 NC_017376.1 873017 873121 D hypothetical protein 873017..873121 Helicobacter pylori SNT49 12367256 YP_005786990.1 CDS HPSNT_04295 NC_017376.1 873118 873798 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(873118..873798) Helicobacter pylori SNT49 12367257 YP_005786991.1 CDS HPSNT_04300 NC_017376.1 873920 875365 R COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase complement(873920..875365) Helicobacter pylori SNT49 12367258 YP_005786992.1 CDS gatA NC_017376.1 875375 876736 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(875375..876736) Helicobacter pylori SNT49 12367259 YP_005786993.1 CDS coaE NC_017376.1 876796 877386 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(876796..877386) Helicobacter pylori SNT49 12367260 YP_005786994.1 CDS speE NC_017376.1 877388 878176 R COG0421 Spermidine synthase; spermidine synthase complement(877388..878176) Helicobacter pylori SNT49 12367261 YP_005786995.1 CDS HPSNT_04320 NC_017376.1 878262 879140 R hypothetical protein complement(878262..879140) Helicobacter pylori SNT49 12367262 YP_005786996.1 CDS HPSNT_04325 NC_017376.1 879217 880605 D COG1160 Predicted GTPases; GTP-binding protein Der 879217..880605 Helicobacter pylori SNT49 12367263 YP_005786997.1 CDS HPSNT_04330 NC_017376.1 880747 881031 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 880747..881031 Helicobacter pylori SNT49 12367264 YP_005786998.1 CDS HPSNT_04335 NC_017376.1 881255 881347 R hypothetical protein complement(881255..881347) Helicobacter pylori SNT49 12367266 YP_005786999.1 CDS HPSNT_04340 NC_017376.1 881623 882228 D COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 881623..882228 Helicobacter pylori SNT49 12367267 YP_005787000.1 CDS HPSNT_04345 NC_017376.1 882248 882865 D hypothetical protein 882248..882865 Helicobacter pylori SNT49 12367268 YP_005787001.1 CDS HPSNT_04350 NC_017376.1 882862 884625 D COG2067 Long-chain fatty acid transport protein; outer membrane protein P1 882862..884625 Helicobacter pylori SNT49 12367269 YP_005787002.1 CDS HPSNT_04355 NC_017376.1 884629 885612 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; UDP-GlcNAc C6 dehydratase 884629..885612 Helicobacter pylori SNT49 12367270 YP_005787003.1 CDS HPSNT_04360 NC_017376.1 885609 886886 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 885609..886886 Helicobacter pylori SNT49 12367271 YP_005787004.1 CDS HPSNT_04365 NC_017376.1 886886 887623 D hypothetical protein 886886..887623 Helicobacter pylori SNT49 12367272 YP_005787005.1 CDS thiE NC_017376.1 887654 888316 R COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(887654..888316) Helicobacter pylori SNT49 12367273 YP_005787006.1 CDS HPSNT_04375 NC_017376.1 888309 889118 R COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; thiamine biosynthesis protein (thi) complement(888309..889118) Helicobacter pylori SNT49 12367274 YP_005787007.1 CDS HPSNT_04380 NC_017376.1 889115 889894 R COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase complement(889115..889894) Helicobacter pylori SNT49 12367275 YP_005787008.1 CDS HPSNT_04385 NC_017376.1 889983 892949 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme subunit R complement(889983..892949) Helicobacter pylori SNT49 12367276 YP_005787009.1 CDS HPSNT_04390 NC_017376.1 892946 893620 R COG0732 Restriction endonuclease S subunits; putative type I restriction-modification enzyme specificity subunit S complement(892946..893620) Helicobacter pylori SNT49 12367277 YP_005787010.1 CDS HPSNT_04395 NC_017376.1 893613 895199 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(893613..895199) Helicobacter pylori SNT49 12367278 YP_005787011.1 CDS HPSNT_04400 NC_017376.1 895381 896364 D COG0270 Site-specific DNA methylase; site-specific DNA methyltransferase 895381..896364 Helicobacter pylori SNT49 12367279 YP_005787012.1 CDS HPSNT_04405 NC_017376.1 896361 897314 D type II restriction endonuclease 896361..897314 Helicobacter pylori SNT49 12367280 YP_005787013.1 CDS HPSNT_04410 NC_017376.1 897455 898141 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 897455..898141 Helicobacter pylori SNT49 12367281 YP_005787014.1 CDS HPSNT_04415 NC_017376.1 898150 899094 R COG2958 Uncharacterized protein conserved in bacteria; hypothetical protein complement(898150..899094) Helicobacter pylori SNT49 12367282 YP_005787015.1 CDS HPSNT_04420 NC_017376.1 899091 900692 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(899091..900692) Helicobacter pylori SNT49 12367283 YP_005787016.1 CDS HPSNT_04425 NC_017376.1 900889 901866 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 900889..901866 Helicobacter pylori SNT49 12367284 YP_005787017.1 CDS HPSNT_04430 NC_017376.1 901840 901983 R hypothetical protein complement(901840..901983) Helicobacter pylori SNT49 12367285 YP_005787018.1 CDS HPSNT_04435 NC_017376.1 901955 902533 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(901955..902533) Helicobacter pylori SNT49 12367286 YP_005787019.1 CDS HPSNT_04440 NC_017376.1 902526 903917 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; bifunctional protein HldE complement(902526..903917) Helicobacter pylori SNT49 12367287 YP_005787020.1 CDS HPSNT_04445 NC_017376.1 903914 904906 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase complement(903914..904906) Helicobacter pylori SNT49 12367288 YP_005787021.1 CDS HPSNT_04450 NC_017376.1 904915 905436 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(904915..905436) Helicobacter pylori SNT49 12367289 YP_005787022.1 CDS HPSNT_04455 NC_017376.1 905426 906166 R COG2836 Uncharacterized conserved protein; hypothetical protein complement(905426..906166) Helicobacter pylori SNT49 12367290 YP_005787023.1 CDS HPSNT_04460 NC_017376.1 906157 906828 R COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase complement(906157..906828) Helicobacter pylori SNT49 12367291 YP_005787024.1 CDS HPSNT_04465 NC_017376.1 906833 908455 R hypothetical protein complement(906833..908455) Helicobacter pylori SNT49 12367292 YP_005787025.1 CDS HPSNT_04470 NC_017376.1 908460 909116 R hypothetical protein complement(908460..909116) Helicobacter pylori SNT49 12367293 YP_005787026.1 CDS dut NC_017376.1 909113 909550 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(909113..909550) Helicobacter pylori SNT49 12367294 YP_005787027.1 CDS greA NC_017376.1 909540 910034 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(909540..910034) Helicobacter pylori SNT49 12367295 YP_005787028.1 CDS HPSNT_04485 NC_017376.1 910075 911157 R COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase complement(910075..911157) Helicobacter pylori SNT49 12367296 YP_005787029.1 CDS HPSNT_04490 NC_017376.1 911157 911618 R hypothetical protein complement(911157..911618) Helicobacter pylori SNT49 12367297 YP_005787030.1 CDS hypA NC_017376.1 911625 911978 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(911625..911978) Helicobacter pylori SNT49 12367298 YP_005787031.1 CDS flgE NC_017376.1 912037 914193 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(912037..914193) Helicobacter pylori SNT49 12367299 YP_005787032.1 CDS HPSNT_04505 NC_017376.1 914456 915190 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(914456..915190) Helicobacter pylori SNT49 12367300 YP_005787033.1 CDS HPSNT_04510 NC_017376.1 915623 915865 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 915623..915865 Helicobacter pylori SNT49 12367301 YP_005787034.1 CDS HPSNT_04515 NC_017376.1 915922 916137 R hypothetical protein complement(915922..916137) Helicobacter pylori SNT49 12367302 YP_005787035.1 CDS HPSNT_04520 NC_017376.1 916224 917099 R hypothetical protein complement(916224..917099) Helicobacter pylori SNT49 12367303 YP_005787036.1 CDS HPSNT_04525 NC_017376.1 917250 918767 R COG0753 Catalase; catalase complement(917250..918767) Helicobacter pylori SNT49 12367304 YP_005787037.1 CDS HPSNT_04530 NC_017376.1 919087 921462 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 919087..921462 Helicobacter pylori SNT49 12367305 YP_005787038.1 CDS ruvC NC_017376.1 921463 921936 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(921463..921936) Helicobacter pylori SNT49 12367306 YP_005787039.1 CDS HPSNT_04540 NC_017376.1 922067 922798 D COG1432 Uncharacterized conserved protein; hypothetical protein 922067..922798 Helicobacter pylori SNT49 12367307 YP_005787040.1 CDS HPSNT_04545 NC_017376.1 922890 923057 R hypothetical protein complement(922890..923057) Helicobacter pylori SNT49 12367308 YP_005787041.1 CDS HPSNT_04550 NC_017376.1 923166 923996 R mosaic CUP0956/HP1116/jhp1044-like protein; hypothetical protein complement(923166..923996) Helicobacter pylori SNT49 12367309 YP_005787042.1 CDS HPSNT_04555 NC_017376.1 924026 924493 R hypothetical protein complement(924026..924493) Helicobacter pylori SNT49 12367310 YP_005787043.1 CDS ruvA NC_017376.1 924670 925221 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(924670..925221) Helicobacter pylori SNT49 12367311 YP_005787044.1 CDS HPSNT_04565 NC_017376.1 925246 927090 R hypothetical protein complement(925246..927090) Helicobacter pylori SNT49 12367312 YP_005787045.1 CDS HPSNT_04570 NC_017376.1 927189 928649 D COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 927189..928649 Helicobacter pylori SNT49 12367313 YP_005787046.1 CDS cysS NC_017376.1 928650 930047 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 928650..930047 Helicobacter pylori SNT49 12367314 YP_005787047.1 CDS HPSNT_04580 NC_017376.1 930277 934263 D vacuolating cytotoxin 930277..934263 Helicobacter pylori SNT49 12367315 YP_005787048.1 CDS HPSNT_04585 NC_017376.1 934345 934446 R hypothetical protein complement(934345..934446) Helicobacter pylori SNT49 12367316 YP_005787049.1 CDS HPSNT_04590 NC_017376.1 934434 935564 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(934434..935564) Helicobacter pylori SNT49 12367317 YP_005787050.1 CDS HPSNT_04595 NC_017376.1 935628 936395 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron compounds ABC transporter ATP-binding protein complement(935628..936395) Helicobacter pylori SNT49 12367318 YP_005787051.1 CDS HPSNT_04600 NC_017376.1 936395 937375 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter permease protein (fecD) complement(936395..937375) Helicobacter pylori SNT49 12367319 YP_005787052.1 CDS HPSNT_04605 NC_017376.1 937368 938216 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); hypothetical protein complement(937368..938216) Helicobacter pylori SNT49 12367320 YP_005787053.1 CDS HPSNT_04610 NC_017376.1 938356 938880 D COG1607 Acyl-CoA hydrolase; hypothetical protein 938356..938880 Helicobacter pylori SNT49 12367321 YP_005787054.1 CDS HPSNT_04615 NC_017376.1 939157 939258 R hypothetical protein complement(939157..939258) Helicobacter pylori SNT49 12367322 YP_005787055.1 CDS HPSNT_04620 NC_017376.1 939245 939556 R hypothetical protein complement(939245..939556) Helicobacter pylori SNT49 12367323 YP_005787056.1 CDS HPSNT_04625 NC_017376.1 939725 940009 R COG3309 Uncharacterized virulence-associated protein D; virulence associated protein D (vapD) complement(939725..940009) Helicobacter pylori SNT49 12367324 YP_005787057.1 CDS HPSNT_04630 NC_017376.1 939990 940106 R hypothetical protein complement(939990..940106) Helicobacter pylori SNT49 12367325 YP_005787058.1 CDS HPSNT_04635 NC_017376.1 940103 940267 R hypothetical protein complement(940103..940267) Helicobacter pylori SNT49 12367326 YP_005787059.1 CDS HPSNT_04640 NC_017376.1 940630 942849 R outer membrane protein BabA complement(940630..942849) Helicobacter pylori SNT49 12367327 YP_005787060.1 CDS HPSNT_04645 NC_017376.1 942961 943053 R hypothetical protein complement(942961..943053) Helicobacter pylori SNT49 12367328 YP_005787061.1 CDS HPSNT_04650 NC_017376.1 943300 943917 D hypothetical protein 943300..943917 Helicobacter pylori SNT49 12367331 YP_005787062.1 CDS HPSNT_04655 NC_017376.1 943868 944980 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(943868..944980) Helicobacter pylori SNT49 12367332 YP_005787063.1 CDS HPSNT_04660 NC_017376.1 944983 945219 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(944983..945219) Helicobacter pylori SNT49 12367333 YP_005787064.1 CDS HPSNT_04665 NC_017376.1 945219 945947 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB complement(945219..945947) Helicobacter pylori SNT49 12367334 YP_005787065.1 CDS HPSNT_04670 NC_017376.1 946063 946185 R hypothetical protein complement(946063..946185) Helicobacter pylori SNT49 12367335 YP_005787066.1 CDS HPSNT_04675 NC_017376.1 946196 946495 R COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein complement(946196..946495) Helicobacter pylori SNT49 12367336 YP_005787067.1 CDS HPSNT_04710 NC_017376.1 949196 950737 D hypothetical protein 949196..950737 Helicobacter pylori SNT49 12367337 YP_005787068.1 CDS flgD NC_017376.1 950788 951732 D COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 950788..951732 Helicobacter pylori SNT49 12367338 YP_005787069.1 CDS flgE NC_017376.1 951729 953546 D COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 951729..953546 Helicobacter pylori SNT49 12367339 YP_005787070.1 CDS HPSNT_04725 NC_017376.1 953598 954221 D restriction endonuclease Hpy8I 953598..954221 Helicobacter pylori SNT49 12367340 YP_005787071.1 CDS HPSNT_04730 NC_017376.1 954202 955362 D COG0827 Adenine-specific DNA methylase; adenine specific DNA methyltransferase 954202..955362 Helicobacter pylori SNT49 12367341 YP_005787072.1 CDS HPSNT_04735 NC_017376.1 955356 957383 D COG0210 Superfamily I DNA and RNA helicases; rep helicase, single-stranded DNA-dependent ATPase 955356..957383 Helicobacter pylori SNT49 12367342 YP_005787073.1 CDS HPSNT_04740 NC_017376.1 957623 957733 R hypothetical protein complement(957623..957733) Helicobacter pylori SNT49 12367343 YP_005787074.1 CDS HPSNT_04745 NC_017376.1 957931 959490 D outer membrane protein HopC 957931..959490 Helicobacter pylori SNT49 12367344 YP_005787075.1 CDS HPSNT_04750 NC_017376.1 959512 961101 D outer membrane protein HopB 959512..961101 Helicobacter pylori SNT49 12367345 YP_005787076.1 CDS HPSNT_04755 NC_017376.1 961918 963462 R COG1190 Lysyl-tRNA synthetase (class II); outer membrane protein HopG complement(961918..963462) Helicobacter pylori SNT49 12367346 YP_005787077.1 CDS HPSNT_04760 NC_017376.1 963709 966150 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein complement(963709..966150) Helicobacter pylori SNT49 12367347 YP_005787078.1 CDS HPSNT_04765 NC_017376.1 966321 966752 R hypothetical protein complement(966321..966752) Helicobacter pylori SNT49 12367348 YP_005787079.1 CDS carB NC_017376.1 966757 970014 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(966757..970014) Helicobacter pylori SNT49 12367349 YP_005787080.1 CDS HPSNT_04775 NC_017376.1 970102 970794 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(970102..970794) Helicobacter pylori SNT49 12367350 YP_005787081.1 CDS HPSNT_04780 NC_017376.1 970938 971936 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 970938..971936 Helicobacter pylori SNT49 12367351 YP_005787082.1 CDS HPSNT_04785 NC_017376.1 972016 979191 D hypothetical protein 972016..979191 Helicobacter pylori SNT49 12367352 YP_005787083.1 CDS HPSNT_04790 NC_017376.1 979243 980352 D outer membrane protein HopK 979243..980352 Helicobacter pylori SNT49 12367353 YP_005787084.1 CDS HPSNT_04795 NC_017376.1 980418 980624 R COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase complement(980418..980624) Helicobacter pylori SNT49 12367354 YP_005787085.1 CDS recR NC_017376.1 980772 981353 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 980772..981353 Helicobacter pylori SNT49 12367355 YP_005787086.1 CDS truD NC_017376.1 981350 982495 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 981350..982495 Helicobacter pylori SNT49 12367356 YP_005787087.1 CDS HPSNT_04810 NC_017376.1 982482 983414 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 982482..983414 Helicobacter pylori SNT49 12367357 YP_005787088.1 CDS folE NC_017376.1 983415 983957 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 983415..983957 Helicobacter pylori SNT49 12367358 YP_005787089.1 CDS HPSNT_04820 NC_017376.1 983973 984884 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 983973..984884 Helicobacter pylori SNT49 12367359 YP_005787090.1 CDS surE NC_017376.1 984881 985684 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 984881..985684 Helicobacter pylori SNT49 12367360 YP_005787091.1 CDS HPSNT_04830 NC_017376.1 985681 986340 D hypothetical protein 985681..986340 Helicobacter pylori SNT49 12367361 YP_005787092.1 CDS HPSNT_04835 NC_017376.1 986342 986944 D COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase 986342..986944 Helicobacter pylori SNT49 12367362 YP_005787093.1 CDS HPSNT_04840 NC_017376.1 986941 987696 D COG0602 Organic radical activating enzymes; radical SAM domain-containing protein 986941..987696 Helicobacter pylori SNT49 12367363 YP_005787094.1 CDS HPSNT_04845 NC_017376.1 987707 988192 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 987707..988192 Helicobacter pylori SNT49 12367364 YP_005787095.1 CDS HPSNT_04850 NC_017376.1 988465 988914 D putative Outer membrane protein 988465..988914 Helicobacter pylori SNT49 12367365 YP_005787096.1 CDS HPSNT_04855 NC_017376.1 988945 990078 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter (proP) complement(988945..990078) Helicobacter pylori SNT49 12367366 YP_005787097.1 CDS HPSNT_04860 NC_017376.1 990589 992298 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(990589..992298) Helicobacter pylori SNT49 12367367 YP_005787098.1 CDS HPSNT_04865 NC_017376.1 992350 993063 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(992350..993063) Helicobacter pylori SNT49 12367368 YP_005787099.1 CDS HPSNT_04870 NC_017376.1 993047 993823 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative polar amino acid transport system substrate-binding protein complement(993047..993823) Helicobacter pylori SNT49 12367369 YP_005787100.1 CDS HPSNT_04875 NC_017376.1 993894 995027 R COG0787 Alanine racemase; alanine racemase complement(993894..995027) Helicobacter pylori SNT49 12367370 YP_005787101.1 CDS HPSNT_04880 NC_017376.1 995034 996386 R COG1115 Na+/alanine symporter; AGCS family alanine/glycine:cation symporter complement(995034..996386) Helicobacter pylori SNT49 12367371 YP_005787102.1 CDS HPSNT_04885 NC_017376.1 996427 997659 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase complement(996427..997659) Helicobacter pylori SNT49 12367372 YP_005787103.1 CDS HPSNT_04890 NC_017376.1 997681 998058 R COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein complement(997681..998058) Helicobacter pylori SNT49 12367373 YP_005787104.1 CDS HPSNT_04895 NC_017376.1 999077 1000567 D COG1757 Na+/H+ antiporter; hypothetical protein 999077..1000567 Helicobacter pylori SNT49 12367378 YP_005787105.1 CDS HPSNT_04900 NC_017376.1 1000883 1001245 D hypothetical protein 1000883..1001245 Helicobacter pylori SNT49 12367379 YP_005787106.1 CDS HPSNT_04905 NC_017376.1 1001632 1002645 R hypothetical protein complement(1001632..1002645) Helicobacter pylori SNT49 12367380 YP_005787107.1 CDS HPSNT_04910 NC_017376.1 1002655 1003107 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(1002655..1003107) Helicobacter pylori SNT49 12367381 YP_005787108.1 CDS HPSNT_04915 NC_017376.1 1003121 1003990 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(1003121..1003990) Helicobacter pylori SNT49 12367382 YP_005787109.1 CDS HPSNT_04920 NC_017376.1 1004071 1004685 D COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 1004071..1004685 Helicobacter pylori SNT49 12367383 YP_005787110.1 CDS HPSNT_04925 NC_017376.1 1004696 1005352 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); competence/damage-inducible protein CinA 1004696..1005352 Helicobacter pylori SNT49 12367384 YP_005787111.1 CDS HPSNT_04930 NC_017376.1 1005355 1005921 R hypothetical protein complement(1005355..1005921) Helicobacter pylori SNT49 12367385 YP_005787112.1 CDS HPSNT_04935 NC_017376.1 1005986 1006582 R COG0778 Nitroreductase; oxygen-insensitive NADPH nitroreductase complement(1005986..1006582) Helicobacter pylori SNT49 12367386 YP_005787113.1 CDS HPSNT_04940 NC_017376.1 1006615 1007469 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(1006615..1007469) Helicobacter pylori SNT49 12367387 YP_005787114.1 CDS HPSNT_04945 NC_017376.1 1007479 1008207 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(1007479..1008207) Helicobacter pylori SNT49 12367388 YP_005787115.1 CDS HPSNT_04950 NC_017376.1 1008226 1009407 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(1008226..1009407) Helicobacter pylori SNT49 12367389 YP_005787116.1 CDS HPSNT_04955 NC_017376.1 1009408 1010172 R COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein complement(1009408..1010172) Helicobacter pylori SNT49 12367390 YP_005787117.1 CDS HPSNT_04960 NC_017376.1 1010182 1010913 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(1010182..1010913) Helicobacter pylori SNT49 12367391 YP_005787118.1 CDS glyQ NC_017376.1 1010915 1011811 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(1010915..1011811) Helicobacter pylori SNT49 12367392 YP_005787119.1 CDS gpsA NC_017376.1 1011825 1012763 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1011825..1012763) Helicobacter pylori SNT49 12367393 YP_005787120.1 CDS HPSNT_04975 NC_017376.1 1012904 1015051 R COG0699 Predicted GTPases (dynamin-related); ATPase complement(1012904..1015051) Helicobacter pylori SNT49 12367394 YP_005787121.1 CDS HPSNT_04980 NC_017376.1 1015051 1015455 R ATP/GTP-binding protein complement(1015051..1015455) Helicobacter pylori SNT49 12367395 YP_005787122.1 CDS HPSNT_04985 NC_017376.1 1015443 1015994 R COG0699 Predicted GTPases (dynamin-related); hypothetical protein complement(1015443..1015994) Helicobacter pylori SNT49 12367396 YP_005787123.1 CDS HPSNT_04990 NC_017376.1 1016216 1016503 R COG3309 Uncharacterized virulence-associated protein D; virulence associated protein D complement(1016216..1016503) Helicobacter pylori SNT49 12367397 YP_005787124.1 CDS HPSNT_04995 NC_017376.1 1016569 1016850 R hypothetical protein complement(1016569..1016850) Helicobacter pylori SNT49 12367398 YP_005787125.1 CDS HPSNT_05000 NC_017376.1 1016861 1019920 R COG3696 Putative silver efflux pump; cobalt-zinc-cadmium resistance protein complement(1016861..1019920) Helicobacter pylori SNT49 12367399 YP_005787126.1 CDS HPSNT_05005 NC_017376.1 1019920 1021014 R COG0845 Membrane-fusion protein; cobalt-zinc-cadmium resistance protein complement(1019920..1021014) Helicobacter pylori SNT49 12367400 YP_005787127.1 CDS HPSNT_05010 NC_017376.1 1021011 1022306 R nickel cobalt outer membrane efflux protein complement(1021011..1022306) Helicobacter pylori SNT49 12367401 YP_005787128.1 CDS glyS NC_017376.1 1022296 1024401 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1022296..1024401) Helicobacter pylori SNT49 12367402 YP_005787129.1 CDS HPSNT_05020 NC_017376.1 1024537 1024680 R hypothetical protein complement(1024537..1024680) Helicobacter pylori SNT49 12367403 YP_005787130.1 CDS HPSNT_05025 NC_017376.1 1025594 1027069 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 1025594..1027069 Helicobacter pylori SNT49 12367404 YP_005787131.1 CDS gatC NC_017376.1 1027084 1027365 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1027084..1027365 Helicobacter pylori SNT49 12367405 YP_005787132.1 CDS HPSNT_05035 NC_017376.1 1027481 1028791 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1027481..1028791) Helicobacter pylori SNT49 12367406 YP_005787133.1 CDS HPSNT_05040 NC_017376.1 1028921 1030384 D PPIase D; rotamase D; COG0760 Parvulin-like peptidyl-prolyl isomerase; pedidyl-prolyl cis-trans ismerase D 1028921..1030384 Helicobacter pylori SNT49 12367407 YP_005787134.1 CDS HPSNT_05045 NC_017376.1 1030399 1031877 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 1030399..1031877 Helicobacter pylori SNT49 12367408 YP_005787135.1 CDS HPSNT_05050 NC_017376.1 1032009 1033166 D COG0206 Cell division GTPase; cell division protein FtsZ 1032009..1033166 Helicobacter pylori SNT49 12367409 YP_005787136.1 CDS HPSNT_05055 NC_017376.1 1033748 1034572 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1033748..1034572) Helicobacter pylori SNT49 12367410 YP_005787137.1 CDS HPSNT_05060 NC_017376.1 1034688 1034831 R hypothetical protein complement(1034688..1034831) Helicobacter pylori SNT49 12367411 YP_005787138.1 CDS HPSNT_05065 NC_017376.1 1034797 1035084 R COG0750 Predicted membrane-associated Zn-dependent proteases 1; regulator of sigma E protease complement(1034797..1035084) Helicobacter pylori SNT49 12367412 YP_005787139.1 CDS HPSNT_05070 NC_017376.1 1035253 1036140 R hypothetical protein complement(1035253..1036140) Helicobacter pylori SNT49 12367413 YP_005787140.1 CDS HPSNT_05075 NC_017376.1 1036152 1036766 R hypothetical protein complement(1036152..1036766) Helicobacter pylori SNT49 12367414 YP_005787141.1 CDS HPSNT_05080 NC_017376.1 1040775 1040870 D hypothetical protein 1040775..1040870 Helicobacter pylori SNT49 12367417 YP_005787142.1 CDS HPSNT_05095 NC_017376.1 1043314 1044567 D COG0608 Single-stranded DNA-specific exonuclease; hypothetical protein 1043314..1044567 Helicobacter pylori SNT49 12367418 YP_005787143.1 CDS HPSNT_05110 NC_017376.1 1046573 1047472 D hypothetical protein 1046573..1047472 Helicobacter pylori SNT49 12367419 YP_005787144.1 CDS HPSNT_05115 NC_017376.1 1047577 1049424 R COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase complement(1047577..1049424) Helicobacter pylori SNT49 12367420 YP_005787145.1 CDS HPSNT_05120 NC_017376.1 1049439 1050608 R COG0438 Glycosyltransferase; putative polysaccharide biosynthesis protein complement(1049439..1050608) Helicobacter pylori SNT49 12367421 YP_005787146.1 CDS HPSNT_05125 NC_017376.1 1050613 1051041 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(1050613..1051041) Helicobacter pylori SNT49 12367422 YP_005787147.1 CDS HPSNT_05130 NC_017376.1 1051057 1051842 R COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase complement(1051057..1051842) Helicobacter pylori SNT49 12367423 YP_005787148.1 CDS HPSNT_05135 NC_017376.1 1051846 1052853 R hypothetical protein complement(1051846..1052853) Helicobacter pylori SNT49 12367424 YP_005787149.1 CDS HPSNT_05140 NC_017376.1 1052854 1054806 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1052854..1054806) Helicobacter pylori SNT49 12367425 YP_005787150.1 CDS HPSNT_05145 NC_017376.1 1054975 1056144 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1054975..1056144 Helicobacter pylori SNT49 12367426 YP_005787151.1 CDS HPSNT_05150 NC_017376.1 1056147 1058018 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1056147..1058018) Helicobacter pylori SNT49 12367427 YP_005787152.1 CDS HPSNT_05155 NC_017376.1 1058497 1058595 R hypothetical protein complement(1058497..1058595) Helicobacter pylori SNT49 12367428 YP_005787153.1 CDS HPSNT_05165 NC_017376.1 1059256 1060008 R flagellar sheath adhesin complement(1059256..1060008) Helicobacter pylori SNT49 12367433 YP_005787154.1 CDS HPSNT_05170 NC_017376.1 1059995 1060102 R hypothetical protein complement(1059995..1060102) Helicobacter pylori SNT49 12367434 YP_005787155.1 CDS guaA NC_017376.1 1060093 1061619 R COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase complement(1060093..1061619) Helicobacter pylori SNT49 12367435 YP_005787156.1 CDS HPSNT_05180 NC_017376.1 1061630 1062118 R hypothetical protein complement(1061630..1062118) Helicobacter pylori SNT49 12367436 YP_005787157.1 CDS HPSNT_05195 NC_017376.1 1064782 1065372 R hypothetical protein complement(1064782..1065372) Helicobacter pylori SNT49 12367437 YP_005787158.1 CDS HPSNT_05200 NC_017376.1 1065398 1066720 R COG0520 Selenocysteine lyase; putative cysteine desulfurase complement(1065398..1066720) Helicobacter pylori SNT49 12367438 YP_005787159.1 CDS HPSNT_05205 NC_017376.1 1066739 1067053 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; ADP hydrolase complement(1066739..1067053) Helicobacter pylori SNT49 12367439 YP_005787160.1 CDS pheS NC_017376.1 1067134 1068120 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1067134..1068120 Helicobacter pylori SNT49 12367440 YP_005787161.1 CDS pheT NC_017376.1 1068120 1070414 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1068120..1070414 Helicobacter pylori SNT49 12367441 YP_005787162.1 CDS HPSNT_05220 NC_017376.1 1070430 1071719 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1070430..1071719 Helicobacter pylori SNT49 12367442 YP_005787163.1 CDS ispH NC_017376.1 1071709 1072533 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1071709..1072533 Helicobacter pylori SNT49 12367443 YP_005787164.1 CDS rpsA NC_017376.1 1072655 1074325 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1072655..1074325 Helicobacter pylori SNT49 12367444 YP_005787165.1 CDS HPSNT_05235 NC_017376.1 1074354 1074872 D hypothetical protein 1074354..1074872 Helicobacter pylori SNT49 12367445 YP_005787166.1 CDS HPSNT_05240 NC_017376.1 1074888 1076462 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1074888..1076462 Helicobacter pylori SNT49 12367446 YP_005787167.1 CDS HPSNT_05245 NC_017376.1 1076472 1078334 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1076472..1078334 Helicobacter pylori SNT49 12367447 YP_005787168.1 CDS HPSNT_05250 NC_017376.1 1078331 1078999 D COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1078331..1078999 Helicobacter pylori SNT49 12367448 YP_005787169.1 CDS HPSNT_05255 NC_017376.1 1079001 1079759 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1079001..1079759 Helicobacter pylori SNT49 12367449 YP_005787170.1 CDS HPSNT_05260 NC_017376.1 1079763 1080698 D COG0835 Chemotaxis signal transduction protein; CheA-MCP interaction modulator 1079763..1080698 Helicobacter pylori SNT49 12367450 YP_005787171.1 CDS HPSNT_05265 NC_017376.1 1080755 1083190 D COG0643 Chemotaxis protein histidine kinase and related kinases; auto phosphorylating histidine kinase 1080755..1083190 Helicobacter pylori SNT49 12367451 YP_005787172.1 CDS HPSNT_05270 NC_017376.1 1083187 1083684 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein/Chea-MCP coupling protein 1083187..1083684 Helicobacter pylori SNT49 12367452 YP_005787173.1 CDS HPSNT_05275 NC_017376.1 1083939 1084439 R COG2077 Peroxiredoxin; thiol peroxidase complement(1083939..1084439) Helicobacter pylori SNT49 12367453 YP_005787174.1 CDS HPSNT_05280 NC_017376.1 1084662 1085303 D COG0605 Superoxide dismutase; superoxide dismutase 1084662..1085303 Helicobacter pylori SNT49 12367454 YP_005787175.1 CDS HPSNT_05285 NC_017376.1 1085355 1086074 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1085355..1086074 Helicobacter pylori SNT49 12367455 YP_005787176.1 CDS HPSNT_05290 NC_017376.1 1086107 1087966 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(1086107..1087966) Helicobacter pylori SNT49 12367456 YP_005787177.1 CDS HPSNT_05295 NC_017376.1 1087951 1088187 R hypothetical protein complement(1087951..1088187) Helicobacter pylori SNT49 12367457 YP_005787178.1 CDS HPSNT_05300 NC_017376.1 1088200 1088427 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1088200..1088427) Helicobacter pylori SNT49 12367458 YP_005787179.1 CDS HPSNT_05305 NC_017376.1 1088603 1089349 D hypothetical protein 1088603..1089349 Helicobacter pylori SNT49 12367459 YP_005787180.1 CDS HPSNT_05310 NC_017376.1 1089357 1089887 R hypothetical protein complement(1089357..1089887) Helicobacter pylori SNT49 12367460 YP_005787181.1 CDS HPSNT_05315 NC_017376.1 1090066 1091289 D COG0501 Zn-dependent protease with chaperone function; metalloprotease; membrane protein 1090066..1091289 Helicobacter pylori SNT49 12367461 YP_005787182.1 CDS HPSNT_05320 NC_017376.1 1091286 1092110 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1091286..1092110 Helicobacter pylori SNT49 12367462 YP_005787183.1 CDS HPSNT_05325 NC_017376.1 1092183 1093529 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1092183..1093529 Helicobacter pylori SNT49 12367463 YP_005787184.1 CDS HPSNT_05330 NC_017376.1 1093704 1096514 R COG1333 ResB protein required for cytochrome c biosynthesis; cytochrome c-type biogenesis protein complement(1093704..1096514) Helicobacter pylori SNT49 12367464 YP_005787185.1 CDS HPSNT_05335 NC_017376.1 1096524 1097195 R COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein complement(1096524..1097195) Helicobacter pylori SNT49 12367465 YP_005787186.1 CDS hemH NC_017376.1 1097269 1098276 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1097269..1098276) Helicobacter pylori SNT49 12367466 YP_005787187.1 CDS HPSNT_05345 NC_017376.1 1098332 1098763 D hypothetical protein 1098332..1098763 Helicobacter pylori SNT49 12367467 YP_005787188.1 CDS HPSNT_05350 NC_017376.1 1098764 1099444 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1098764..1099444 Helicobacter pylori SNT49 12367468 YP_005787189.1 CDS HPSNT_05355 NC_017376.1 1099467 1101557 R hypothetical protein complement(1099467..1101557) Helicobacter pylori SNT49 12367469 YP_005787190.1 CDS dcd NC_017376.1 1101716 1102282 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(1101716..1102282) Helicobacter pylori SNT49 12367470 YP_005787191.1 CDS HPSNT_05365 NC_017376.1 1102411 1102881 D COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein (fabE) 1102411..1102881 Helicobacter pylori SNT49 12367471 YP_005787192.1 CDS HPSNT_05370 NC_017376.1 1102887 1104272 D COG0439 Biotin carboxylase; biotin carboxylase 1102887..1104272 Helicobacter pylori SNT49 12367472 YP_005787193.1 CDS HPSNT_05385 NC_017376.1 1105413 1106375 D COG1015 Phosphopentomutase; putative type II DNA modification enzyme (methyltransferase) 1105413..1106375 Helicobacter pylori SNT49 12367473 YP_005787194.1 CDS HPSNT_05390 NC_017376.1 1106375 1106923 D type II R-M system restriction endonuclease 1106375..1106923 Helicobacter pylori SNT49 12367474 YP_005787195.1 CDS HPSNT_05395 NC_017376.1 1107012 1107611 D hypothetical protein 1107012..1107611 Helicobacter pylori SNT49 12367475 YP_005787196.1 CDS HPSNT_05400 NC_017376.1 1107608 1108735 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; spore coat polysaccharide biosynthesis protein C 1107608..1108735 Helicobacter pylori SNT49 12367476 YP_005787197.1 CDS nrdF NC_017376.1 1109056 1110081 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1109056..1110081 Helicobacter pylori SNT49 12367478 YP_005787198.1 CDS pcm NC_017376.1 1110091 1110720 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1110091..1110720 Helicobacter pylori SNT49 12367479 YP_005787199.1 CDS HPSNT_05415 NC_017376.1 1110731 1111768 D COG0795 Predicted permeases; hypothetical protein 1110731..1111768 Helicobacter pylori SNT49 12367480 YP_005787200.1 CDS truA NC_017376.1 1111769 1112497 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1111769..1112497 Helicobacter pylori SNT49 12367481 YP_005787201.1 CDS HPSNT_05425 NC_017376.1 1112491 1113525 R COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1112491..1113525) Helicobacter pylori SNT49 12367482 YP_005787202.1 CDS HPSNT_05430 NC_017376.1 1113944 1114078 R hypothetical protein complement(1113944..1114078) Helicobacter pylori SNT49 12367485 YP_005787203.1 CDS HPSNT_05435 NC_017376.1 1114091 1115626 D putative outer membrane protein 1114091..1115626 Helicobacter pylori SNT49 12367486 YP_005787204.1 CDS HPSNT_05440 NC_017376.1 1115648 1116400 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1115648..1116400 Helicobacter pylori SNT49 12367487 YP_005787205.1 CDS HPSNT_05445 NC_017376.1 1116590 1117462 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1116590..1117462) Helicobacter pylori SNT49 12367488 YP_005787206.1 CDS HPSNT_05450 NC_017376.1 1117532 1118158 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase complement(1117532..1118158) Helicobacter pylori SNT49 12367489 YP_005787207.1 CDS HPSNT_05455 NC_017376.1 1118177 1120003 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase complement(1118177..1120003) Helicobacter pylori SNT49 12367490 YP_005787208.1 CDS HPSNT_05460 NC_017376.1 1120069 1121346 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1120069..1121346 Helicobacter pylori SNT49 12367491 YP_005787209.1 CDS HPSNT_05465 NC_017376.1 1121356 1122039 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1121356..1122039 Helicobacter pylori SNT49 12367492 YP_005787210.1 CDS glk NC_017376.1 1122026 1123036 D COG0837 Glucokinase; glucokinase 1122026..1123036 Helicobacter pylori SNT49 12367493 YP_005787211.1 CDS HPSNT_05475 NC_017376.1 1123206 1124252 D COG1064 Zn-dependent alcohol dehydrogenases; mannitol dehydrogenase 1123206..1124252 Helicobacter pylori SNT49 12367494 YP_005787212.1 CDS HPSNT_05480 NC_017376.1 1124262 1125458 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1124262..1125458) Helicobacter pylori SNT49 12367495 YP_005787213.1 CDS HPSNT_05485 NC_017376.1 1125535 1125627 D hypothetical protein 1125535..1125627 Helicobacter pylori SNT49 12367496 YP_005787214.1 CDS HPSNT_05490 NC_017376.1 1125649 1126956 D hypothetical protein 1125649..1126956 Helicobacter pylori SNT49 12367497 YP_005787215.1 CDS HPSNT_05495 NC_017376.1 1126963 1127625 R outer membrane protein (omp23) complement(1126963..1127625) Helicobacter pylori SNT49 12367498 YP_005787216.1 CDS HPSNT_05500 NC_017376.1 1127916 1128476 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1127916..1128476 Helicobacter pylori SNT49 12367499 YP_005787217.1 CDS porD NC_017376.1 1128493 1128885 D COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1128493..1128885 Helicobacter pylori SNT49 12367500 YP_005787218.1 CDS porA NC_017376.1 1128895 1130118 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1128895..1130118 Helicobacter pylori SNT49 12367501 YP_005787219.1 CDS HPSNT_05515 NC_017376.1 1130131 1131075 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1130131..1131075 Helicobacter pylori SNT49 12367502 YP_005787220.1 CDS HPSNT_05520 NC_017376.1 1131186 1132508 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1131186..1132508 Helicobacter pylori SNT49 12367503 YP_005787221.1 CDS HPSNT_05525 NC_017376.1 1132574 1133407 D putative outer membrane protein 1132574..1133407 Helicobacter pylori SNT49 12367504 YP_005787222.1 CDS HPSNT_05530 NC_017376.1 1133418 1135394 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1133418..1135394) Helicobacter pylori SNT49 12367505 YP_005787223.1 CDS HPSNT_05535 NC_017376.1 1135435 1136313 R hypothetical protein complement(1135435..1136313) Helicobacter pylori SNT49 12367506 YP_005787224.1 CDS HPSNT_05540 NC_017376.1 1136397 1138121 R hypothetical protein complement(1136397..1138121) Helicobacter pylori SNT49 12367507 YP_005787225.1 CDS HPSNT_05545 NC_017376.1 1138181 1139179 R hypothetical protein complement(1138181..1139179) Helicobacter pylori SNT49 12367508 YP_005787226.1 CDS HPSNT_05550 NC_017376.1 1139187 1139348 D hypothetical protein 1139187..1139348 Helicobacter pylori SNT49 12367509 YP_005787227.1 CDS HPSNT_05555 NC_017376.1 1139585 1140355 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1139585..1140355) Helicobacter pylori SNT49 12367510 YP_005787228.1 CDS HPSNT_05560 NC_017376.1 1140621 1142324 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(1140621..1142324) Helicobacter pylori SNT49 12367511 YP_005787229.1 CDS flgK NC_017376.1 1142512 1144332 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1142512..1144332) Helicobacter pylori SNT49 12367512 YP_005787230.1 CDS HPSNT_05570 NC_017376.1 1144334 1144768 R hypothetical protein complement(1144334..1144768) Helicobacter pylori SNT49 12367513 YP_005787231.1 CDS HPSNT_05575 NC_017376.1 1144891 1145829 R COG0270 Site-specific DNA methylase; type II DNA modification enzyme complement(1144891..1145829) Helicobacter pylori SNT49 12367514 YP_005787232.1 CDS HPSNT_05580 NC_017376.1 1145981 1146184 R hypothetical protein complement(1145981..1146184) Helicobacter pylori SNT49 12367515 YP_005787233.1 CDS HPSNT_05585 NC_017376.1 1146248 1146454 R hypothetical protein complement(1146248..1146454) Helicobacter pylori SNT49 12367516 YP_005787234.1 CDS HPSNT_05590 NC_017376.1 1146486 1147043 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD complement(1146486..1147043) Helicobacter pylori SNT49 12367517 YP_005787235.1 CDS HPSNT_05595 NC_017376.1 1147030 1148025 R COG0457 FOG: TPR repeat; hypothetical protein complement(1147030..1148025) Helicobacter pylori SNT49 12367518 YP_005787236.1 CDS HPSNT_05600 NC_017376.1 1148033 1148584 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1148033..1148584) Helicobacter pylori SNT49 12367519 YP_005787237.1 CDS tolB NC_017376.1 1148650 1149903 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1148650..1149903) Helicobacter pylori SNT49 12367520 YP_005787238.1 CDS HPSNT_05610 NC_017376.1 1149900 1150724 R hypothetical protein complement(1149900..1150724) Helicobacter pylori SNT49 12367521 YP_005787239.1 CDS HPSNT_05615 NC_017376.1 1150743 1151144 R COG0848 Biopolymer transport protein; biopolymer transport protein complement(1150743..1151144) Helicobacter pylori SNT49 12367522 YP_005787240.1 CDS HPSNT_05620 NC_017376.1 1151197 1151766 R COG0811 Biopolymer transport proteins; biopolymer transport protein complement(1151197..1151766) Helicobacter pylori SNT49 12367523 YP_005787241.1 CDS atpC NC_017376.1 1151777 1152148 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1151777..1152148) Helicobacter pylori SNT49 12367524 YP_005787242.1 CDS HPSNT_05630 NC_017376.1 1152159 1153559 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1152159..1153559) Helicobacter pylori SNT49 12367525 YP_005787243.1 CDS HPSNT_05635 NC_017376.1 1153592 1154497 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1153592..1154497) Helicobacter pylori SNT49 12367526 YP_005787244.1 CDS HPSNT_05640 NC_017376.1 1154512 1156023 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1154512..1156023) Helicobacter pylori SNT49 12367527 YP_005787245.1 CDS HPSNT_05645 NC_017376.1 1156046 1156588 R COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta complement(1156046..1156588) Helicobacter pylori SNT49 12367528 YP_005787246.1 CDS HPSNT_05650 NC_017376.1 1156589 1157104 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(1156589..1157104) Helicobacter pylori SNT49 12367529 YP_005787247.1 CDS HPSNT_05655 NC_017376.1 1157108 1157542 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' complement(1157108..1157542) Helicobacter pylori SNT49 12367530 YP_005787248.1 CDS HPSNT_05660 NC_017376.1 1157657 1158529 R COG1475 Predicted transcriptional regulators; plasmid replication-partition related protein complement(1157657..1158529) Helicobacter pylori SNT49 12367531 YP_005787249.1 CDS HPSNT_05665 NC_017376.1 1158533 1159324 R COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein complement(1158533..1159324) Helicobacter pylori SNT49 12367532 YP_005787250.1 CDS HPSNT_05670 NC_017376.1 1159330 1159968 R COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase complement(1159330..1159968) Helicobacter pylori SNT49 12367533 YP_005787251.1 CDS fmt NC_017376.1 1159965 1160876 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1159965..1160876) Helicobacter pylori SNT49 12367534 YP_005787252.1 CDS HPSNT_05690 NC_017376.1 1163407 1164705 R COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1163407..1164705) Helicobacter pylori SNT49 12367535 YP_005787253.1 CDS HPSNT_05695 NC_017376.1 1164922 1165146 D hypothetical protein 1164922..1165146 Helicobacter pylori SNT49 12367536 YP_005787254.1 CDS HPSNT_05700 NC_017376.1 1165358 1165552 R hypothetical protein complement(1165358..1165552) Helicobacter pylori SNT49 12367537 YP_005787255.1 CDS HPSNT_05705 NC_017376.1 1165647 1165751 R hypothetical protein complement(1165647..1165751) Helicobacter pylori SNT49 12367538 YP_005787256.1 CDS HPSNT_05710 NC_017376.1 1167844 1167978 R hypothetical protein complement(1167844..1167978) Helicobacter pylori SNT49 12367540 YP_005787257.1 CDS HPSNT_05715 NC_017376.1 1168073 1168819 R COG1432 Uncharacterized conserved protein; hypothetical protein complement(1168073..1168819) Helicobacter pylori SNT49 12367541 YP_005787258.1 CDS rplS NC_017376.1 1169188 1169544 R COG0335 Ribosomal protein L19; 50S ribosomal protein L19 complement(1169188..1169544) Helicobacter pylori SNT49 12367542 YP_005787259.1 CDS trmD NC_017376.1 1169566 1170255 R COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(1169566..1170255) Helicobacter pylori SNT49 12367543 YP_005787260.1 CDS rimM NC_017376.1 1170256 1170810 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(1170256..1170810) Helicobacter pylori SNT49 12367544 YP_005787261.1 CDS HPSNT_05735 NC_017376.1 1170811 1171158 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(1170811..1171158) Helicobacter pylori SNT49 12367545 YP_005787262.1 CDS rpsP NC_017376.1 1171175 1171405 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1171175..1171405) Helicobacter pylori SNT49 12367546 YP_005787263.1 CDS HPSNT_05745 NC_017376.1 1171479 1172825 R COG0541 Signal recognition particle GTPase; signal recognition particle protein complement(1171479..1172825) Helicobacter pylori SNT49 12367547 YP_005787264.1 CDS valS NC_017376.1 1172840 1175458 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(1172840..1175458) Helicobacter pylori SNT49 12367548 YP_005787265.1 CDS HPSNT_05755 NC_017376.1 1175594 1176001 D COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1175594..1176001 Helicobacter pylori SNT49 12367549 YP_005787266.1 CDS murG NC_017376.1 1176013 1177074 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1176013..1177074 Helicobacter pylori SNT49 12367550 YP_005787267.1 CDS HPSNT_05765 NC_017376.1 1177183 1179273 D outer membrane protein HopI 1177183..1179273 Helicobacter pylori SNT49 12367551 YP_005787268.1 CDS HPSNT_05770 NC_017376.1 1179296 1182964 D outer membrane protein (omp26) 1179296..1182964 Helicobacter pylori SNT49 12367552 YP_005787269.1 CDS HPSNT_05775 NC_017376.1 1182977 1183750 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1182977..1183750 Helicobacter pylori SNT49 12367553 YP_005787270.1 CDS HPSNT_05780 NC_017376.1 1183777 1184310 D COG2184 Protein involved in cell division; cell filamentation protein 1183777..1184310 Helicobacter pylori SNT49 12367554 YP_005787271.1 CDS HPSNT_05785 NC_017376.1 1184554 1184976 R COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein complement(1184554..1184976) Helicobacter pylori SNT49 12367555 YP_005787272.1 CDS HPSNT_05790 NC_017376.1 1185030 1185524 R COG0716 Flavodoxins; flavodoxin FldA complement(1185030..1185524) Helicobacter pylori SNT49 12367556 YP_005787273.1 CDS HPSNT_05795 NC_017376.1 1185615 1186196 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1185615..1186196) Helicobacter pylori SNT49 12367557 YP_005787274.1 CDS HPSNT_05800 NC_017376.1 1186320 1186511 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit for cbb3-type oxidase 1186320..1186511 Helicobacter pylori SNT49 12367558 YP_005787275.1 CDS HPSNT_05805 NC_017376.1 1186538 1187506 D COG0492 Thioredoxin reductase; thioredoxin reductase family protein 1186538..1187506 Helicobacter pylori SNT49 12367559 YP_005787276.1 CDS pgi NC_017376.1 1188946 1190583 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1188946..1190583 Helicobacter pylori SNT49 12367560 YP_005787277.1 CDS HPSNT_05825 NC_017376.1 1190889 1192304 D outer membrane protein HofH 1190889..1192304 Helicobacter pylori SNT49 12367561 YP_005787278.1 CDS HPSNT_05830 NC_017376.1 1192682 1194745 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(1192682..1194745) Helicobacter pylori SNT49 12367562 YP_005787279.1 CDS HPSNT_05835 NC_017376.1 1194955 1195608 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1194955..1195608 Helicobacter pylori SNT49 12367563 YP_005787280.1 CDS HPSNT_05840 NC_017376.1 1195611 1196282 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1195611..1196282 Helicobacter pylori SNT49 12367564 YP_005787281.1 CDS HPSNT_05845 NC_017376.1 1196284 1197030 D COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1196284..1197030 Helicobacter pylori SNT49 12367565 YP_005787282.1 CDS HPSNT_05850 NC_017376.1 1197079 1197912 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter, periplasmic glutamine-binding protein 1197079..1197912 Helicobacter pylori SNT49 12367566 YP_005787283.1 CDS HPSNT_05855 NC_017376.1 1198030 1198581 D hypothetical protein 1198030..1198581 Helicobacter pylori SNT49 12367567 YP_005787284.1 CDS HPSNT_05860 NC_017376.1 1198834 1200057 R COG0738 Fucose permease; glucose/galactose transporter complement(1198834..1200057) Helicobacter pylori SNT49 12367568 YP_005787285.1 CDS HPSNT_05865 NC_017376.1 1200186 1201493 R COG2252 Permeases; hypothetical protein complement(1200186..1201493) Helicobacter pylori SNT49 12367569 YP_005787286.1 CDS HPSNT_05870 NC_017376.1 1201830 1201922 D hypothetical protein 1201830..1201922 Helicobacter pylori SNT49 12367570 YP_005787287.1 CDS HPSNT_05875 NC_017376.1 1201952 1203874 R outer membrane protein (omp27) complement(1201952..1203874) Helicobacter pylori SNT49 12367571 YP_005787288.1 CDS HPSNT_05880 NC_017376.1 1204312 1205013 R COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase complement(1204312..1205013) Helicobacter pylori SNT49 12367572 YP_005787289.1 CDS HPSNT_05885 NC_017376.1 1205010 1206251 R COG1015 Phosphopentomutase; phosphopentomutase complement(1205010..1206251) Helicobacter pylori SNT49 12367573 YP_005787290.1 CDS HPSNT_05890 NC_017376.1 1206263 1207519 R COG1972 Nucleoside permease; pyrimidine nucleoside transport protein (nupC) complement(1206263..1207519) Helicobacter pylori SNT49 12367574 YP_005787291.1 CDS HPSNT_05895 NC_017376.1 1207819 1207923 R hypothetical protein complement(1207819..1207923) Helicobacter pylori SNT49 12367576 YP_005787292.1 CDS HPSNT_05900 NC_017376.1 1207847 1209178 D COG0477 Permeases of the major facilitator superfamily; multidrug-efflux transporter 1207847..1209178 Helicobacter pylori SNT49 12367577 YP_005787293.1 CDS HPSNT_05905 NC_017376.1 1209197 1209958 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1209197..1209958 Helicobacter pylori SNT49 12367578 YP_005787294.1 CDS HPSNT_05910 NC_017376.1 1209967 1211118 R COG0475 Kef-type K+ transport systems, membrane components; Na+/H+ antiporter complement(1209967..1211118) Helicobacter pylori SNT49 12367579 YP_005787295.1 CDS HPSNT_05915 NC_017376.1 1211144 1212523 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1211144..1212523) Helicobacter pylori SNT49 12367580 YP_005787296.1 CDS HPSNT_05920 NC_017376.1 1212693 1213868 R COG2814 Arabinose efflux permease; putative arabinose transporter complement(1212693..1213868) Helicobacter pylori SNT49 12367581 YP_005787297.1 CDS HPSNT_05925 NC_017376.1 1214144 1214887 D COG3338 Carbonic anhydrase; Alpha-carbonic anhydrase 1214144..1214887 Helicobacter pylori SNT49 12367582 YP_005787298.1 CDS HPSNT_05930 NC_017376.1 1215123 1216373 R hypothetical protein complement(1215123..1216373) Helicobacter pylori SNT49 12367583 YP_005787299.1 CDS HPSNT_05935 NC_017376.1 1216805 1217845 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(1216805..1217845) Helicobacter pylori SNT49 12367584 YP_005787300.1 CDS hisS NC_017376.1 1217832 1219160 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1217832..1219160) Helicobacter pylori SNT49 12367585 YP_005787301.1 CDS HPSNT_05945 NC_017376.1 1219222 1220271 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1219222..1220271 Helicobacter pylori SNT49 12367586 YP_005787302.1 CDS HPSNT_05950 NC_017376.1 1220351 1220449 D hypothetical protein 1220351..1220449 Helicobacter pylori SNT49 12367587 YP_005787303.1 CDS HPSNT_05955 NC_017376.1 1220461 1220787 R hypothetical protein complement(1220461..1220787) Helicobacter pylori SNT49 12367588 YP_005787304.1 CDS HPSNT_05970 NC_017376.1 1222535 1224613 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(1222535..1224613) Helicobacter pylori SNT49 12367589 YP_005787305.1 CDS HPSNT_05975 NC_017376.1 1224625 1225092 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(1224625..1225092) Helicobacter pylori SNT49 12367590 YP_005787306.1 CDS rpsL NC_017376.1 1225108 1225515 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(1225108..1225515) Helicobacter pylori SNT49 12367591 YP_005787307.1 CDS HPSNT_05985 NC_017376.1 1225603 1234275 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; bifunctional DNA-directed RNA polymerase subunit beta/beta' complement(1225603..1234275) Helicobacter pylori SNT49 12367592 YP_005787308.1 CDS HPSNT_05990 NC_017376.1 1234269 1234460 D hypothetical protein 1234269..1234460 Helicobacter pylori SNT49 12367593 YP_005787309.1 CDS rplL NC_017376.1 1234498 1234875 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1234498..1234875) Helicobacter pylori SNT49 12367594 YP_005787310.1 CDS rplJ NC_017376.1 1234920 1235414 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(1234920..1235414) Helicobacter pylori SNT49 12367595 YP_005787311.1 CDS rplA NC_017376.1 1235523 1236227 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(1235523..1236227) Helicobacter pylori SNT49 12367596 YP_005787312.1 CDS rplK NC_017376.1 1236272 1236697 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(1236272..1236697) Helicobacter pylori SNT49 12367597 YP_005787313.1 CDS nusG NC_017376.1 1236715 1237242 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(1236715..1237242) Helicobacter pylori SNT49 12367598 YP_005787314.1 CDS secE NC_017376.1 1237272 1237451 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(1237272..1237451) Helicobacter pylori SNT49 12367599 YP_005787315.1 CDS rpmG NC_017376.1 1237709 1237867 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1237709..1237867) Helicobacter pylori SNT49 12367601 YP_005787316.1 CDS HPSNT_06030 NC_017376.1 1237901 1239100 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(1237901..1239100) Helicobacter pylori SNT49 12367602 YP_005787317.1 CDS HPSNT_06035 NC_017376.1 1239803 1241539 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC-transporter, ATP-binding domain 1239803..1241539 Helicobacter pylori SNT49 12367607 YP_005787318.1 CDS HPSNT_06040 NC_017376.1 1241548 1242216 R COG0546 Predicted phosphatases; hypothetical protein complement(1241548..1242216) Helicobacter pylori SNT49 12367608 YP_005787319.1 CDS HPSNT_06045 NC_017376.1 1242319 1243308 R COG3392 Adenine-specific DNA methylase; Site-specific DNA-methyltransferase complement(1242319..1243308) Helicobacter pylori SNT49 12367609 YP_005787320.1 CDS HPSNT_06050 NC_017376.1 1243668 1243814 R hypothetical protein complement(1243668..1243814) Helicobacter pylori SNT49 12367610 YP_005787321.1 CDS HPSNT_06055 NC_017376.1 1244035 1244550 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(1244035..1244550) Helicobacter pylori SNT49 12367611 YP_005787322.1 CDS HPSNT_06060 NC_017376.1 1245099 1245416 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(1245099..1245416) Helicobacter pylori SNT49 12367617 YP_005787323.1 CDS HPSNT_06065 NC_017376.1 1245549 1247615 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(1245549..1247615) Helicobacter pylori SNT49 12367619 YP_005787324.1 CDS HPSNT_06070 NC_017376.1 1247618 1248322 R COG1926 Predicted phosphoribosyltransferases; hypothetical protein complement(1247618..1248322) Helicobacter pylori SNT49 12367620 YP_005787325.1 CDS HPSNT_06075 NC_017376.1 1248337 1250598 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1248337..1250598) Helicobacter pylori SNT49 12367621 YP_005787326.1 CDS HPSNT_06080 NC_017376.1 1250601 1251080 R hypothetical protein complement(1250601..1251080) Helicobacter pylori SNT49 12367622 YP_005787327.1 CDS HPSNT_06085 NC_017376.1 1251129 1252400 R COG0151 Phosphoribosylamine-glycine ligase; glycinamide ribonucleotide synthetase complement(1251129..1252400) Helicobacter pylori SNT49 12367623 YP_005787328.1 CDS HPSNT_06090 NC_017376.1 1252802 1253125 R hypothetical protein complement(1252802..1253125) Helicobacter pylori SNT49 12367624 YP_005787329.1 CDS HPSNT_06095 NC_017376.1 1253127 1253597 R hypothetical protein complement(1253127..1253597) Helicobacter pylori SNT49 12367626 YP_005787330.1 CDS HPSNT_06100 NC_017376.1 1253685 1253801 R hypothetical protein complement(1253685..1253801) Helicobacter pylori SNT49 12367628 YP_005787331.1 CDS HPSNT_06105 NC_017376.1 1253850 1254005 D hypothetical protein 1253850..1254005 Helicobacter pylori SNT49 12367629 YP_005787332.1 CDS HPSNT_06110 NC_017376.1 1254040 1254726 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1254040..1254726) Helicobacter pylori SNT49 12367630 YP_005787333.1 CDS HPSNT_06115 NC_017376.1 1254720 1255424 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase complement(1254720..1255424) Helicobacter pylori SNT49 12367631 YP_005787334.1 CDS HPSNT_06120 NC_017376.1 1255465 1258305 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1255465..1258305) Helicobacter pylori SNT49 12367632 YP_005787335.1 CDS HPSNT_06125 NC_017376.1 1258377 1258709 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1258377..1258709 Helicobacter pylori SNT49 12367633 YP_005787336.1 CDS hemD NC_017376.1 1258712 1259392 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1258712..1259392 Helicobacter pylori SNT49 12367634 YP_005787337.1 CDS HPSNT_06135 NC_017376.1 1259440 1259832 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1259440..1259832 Helicobacter pylori SNT49 12367635 YP_005787338.1 CDS HPSNT_06140 NC_017376.1 1259883 1260920 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(1259883..1260920) Helicobacter pylori SNT49 12367636 YP_005787339.1 CDS HPSNT_06145 NC_017376.1 1261015 1261305 D COG2863 Cytochrome c553; cytochrome c-553 1261015..1261305 Helicobacter pylori SNT49 12367637 YP_005787340.1 CDS HPSNT_06150 NC_017376.1 1261298 1261390 R hypothetical protein complement(1261298..1261390) Helicobacter pylori SNT49 12367638 YP_005787341.1 CDS HPSNT_06155 NC_017376.1 1261466 1261933 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1261466..1261933 Helicobacter pylori SNT49 12367639 YP_005787342.1 CDS HPSNT_06160 NC_017376.1 1261935 1263152 D COG0527 Aspartokinases; aspartate kinase 1261935..1263152 Helicobacter pylori SNT49 12367640 YP_005787343.1 CDS HPSNT_06165 NC_017376.1 1263149 1263691 D hypothetical protein 1263149..1263691 Helicobacter pylori SNT49 12367641 YP_005787344.1 CDS HPSNT_06170 NC_017376.1 1263688 1264344 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1263688..1264344 Helicobacter pylori SNT49 12367642 YP_005787345.1 CDS HPSNT_06175 NC_017376.1 1264341 1265483 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1264341..1265483 Helicobacter pylori SNT49 12367643 YP_005787346.1 CDS HPSNT_06180 NC_017376.1 1265509 1265970 R hypothetical protein complement(1265509..1265970) Helicobacter pylori SNT49 12367644 YP_005787347.1 CDS HPSNT_06185 NC_017376.1 1266364 1267260 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; membrane transport protein 1266364..1267260 Helicobacter pylori SNT49 12367645 YP_005787348.1 CDS HPSNT_06190 NC_017376.1 1267264 1268511 D hypothetical protein 1267264..1268511 Helicobacter pylori SNT49 12367646 YP_005787349.1 CDS HPSNT_06195 NC_017376.1 1268508 1268591 R hypothetical protein complement(1268508..1268591) Helicobacter pylori SNT49 12367647 YP_005787350.1 CDS HPSNT_06200 NC_017376.1 1268590 1269141 D COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1268590..1269141 Helicobacter pylori SNT49 12367648 YP_005787351.1 CDS HPSNT_06205 NC_017376.1 1269141 1270268 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1269141..1270268 Helicobacter pylori SNT49 12367649 YP_005787352.1 CDS amiF NC_017376.1 1270435 1271439 D COG0388 Predicted amidohydrolase; formamidase 1270435..1271439 Helicobacter pylori SNT49 12367650 YP_005787353.1 CDS HPSNT_06215 NC_017376.1 1271921 1272397 R hypothetical protein complement(1271921..1272397) Helicobacter pylori SNT49 12367651 YP_005787354.1 CDS HPSNT_06220 NC_017376.1 1272516 1273088 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1272516..1273088) Helicobacter pylori SNT49 12367652 YP_005787355.1 CDS alaS NC_017376.1 1273090 1275633 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(1273090..1275633) Helicobacter pylori SNT49 12367653 YP_005787356.1 CDS HPSNT_06230 NC_017376.1 1275753 1275983 D COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1275753..1275983 Helicobacter pylori SNT49 12367654 YP_005787357.1 CDS HPSNT_06235 NC_017376.1 1276282 1276392 R hypothetical protein complement(1276282..1276392) Helicobacter pylori SNT49 12367655 YP_005787358.1 CDS HPSNT_06240 NC_017376.1 1276597 1278717 R outer membrane protein HopT/BabB complement(1276597..1278717) Helicobacter pylori SNT49 12367656 YP_005787359.1 CDS HPSNT_06245 NC_017376.1 1278765 1278887 D hypothetical protein 1278765..1278887 Helicobacter pylori SNT49 12367657 YP_005787360.1 CDS rpsR NC_017376.1 1279027 1279284 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(1279027..1279284) Helicobacter pylori SNT49 12367658 YP_005787361.1 CDS HPSNT_06255 NC_017376.1 1279307 1279852 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1279307..1279852) Helicobacter pylori SNT49 12367659 YP_005787362.1 CDS rpsF NC_017376.1 1279862 1280290 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(1279862..1280290) Helicobacter pylori SNT49 12367660 YP_005787363.1 CDS HPSNT_06265 NC_017376.1 1280444 1281466 R DNA polymerase III subunit delta complement(1280444..1281466) Helicobacter pylori SNT49 12367661 YP_005787364.1 CDS HPSNT_06270 NC_017376.1 1281456 1283390 R COG0557 Exoribonuclease R; ribonuclease R complement(1281456..1283390) Helicobacter pylori SNT49 12367662 YP_005787365.1 CDS aroE NC_017376.1 1283390 1284181 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1283390..1284181) Helicobacter pylori SNT49 12367663 YP_005787366.1 CDS HPSNT_06280 NC_017376.1 1284189 1284767 R hypothetical protein complement(1284189..1284767) Helicobacter pylori SNT49 12367664 YP_005787367.1 CDS HPSNT_06285 NC_017376.1 1284788 1285834 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease complement(1284788..1285834) Helicobacter pylori SNT49 12367665 YP_005787368.1 CDS HPSNT_06290 NC_017376.1 1285831 1287612 R COG4166 ABC-type oligopeptide transport system, periplasmic component; hypothetical protein complement(1285831..1287612) Helicobacter pylori SNT49 12367666 YP_005787369.1 CDS HPSNT_06295 NC_017376.1 1287613 1288593 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1287613..1288593) Helicobacter pylori SNT49 12367667 YP_005787370.1 CDS HPSNT_06300 NC_017376.1 1288665 1289387 R COG0500 SAM-dependent methyltransferases; biotin synthase complement(1288665..1289387) Helicobacter pylori SNT49 12367668 YP_005787371.1 CDS secG NC_017376.1 1289509 1290114 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1289509..1290114 Helicobacter pylori SNT49 12367669 YP_005787372.1 CDS frr NC_017376.1 1290114 1290671 D COG0233 Ribosome recycling factor; ribosome recycling factor 1290114..1290671 Helicobacter pylori SNT49 12367670 YP_005787373.1 CDS pyrE NC_017376.1 1290675 1291280 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1290675..1291280 Helicobacter pylori SNT49 12367671 YP_005787374.1 CDS HPSNT_06320 NC_017376.1 1291270 1291734 D COG1714 Predicted membrane protein/domain; hypothetical protein 1291270..1291734 Helicobacter pylori SNT49 12367672 YP_005787375.1 CDS HPSNT_06325 NC_017376.1 1291731 1292420 D COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1291731..1292420 Helicobacter pylori SNT49 12367673 YP_005787376.1 CDS HPSNT_06330 NC_017376.1 1292522 1292923 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1292522..1292923 Helicobacter pylori SNT49 12367674 YP_005787377.1 CDS HPSNT_06335 NC_017376.1 1292923 1293402 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1292923..1293402 Helicobacter pylori SNT49 12367675 YP_005787378.1 CDS HPSNT_06340 NC_017376.1 1293402 1294199 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1293402..1294199 Helicobacter pylori SNT49 12367676 YP_005787379.1 CDS HPSNT_06345 NC_017376.1 1294201 1295430 D COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1294201..1295430 Helicobacter pylori SNT49 12367677 YP_005787380.1 CDS HPSNT_06350 NC_017376.1 1295427 1295657 D NADH dehydrogenase I subunit E 1295427..1295657 Helicobacter pylori SNT49 12367678 YP_005787381.1 CDS HPSNT_06355 NC_017376.1 1295660 1296646 D NADH dehydrogenase I subunit F 1295660..1296646 Helicobacter pylori SNT49 12367679 YP_005787382.1 CDS HPSNT_06360 NC_017376.1 1296643 1299177 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1296643..1299177 Helicobacter pylori SNT49 12367680 YP_005787383.1 CDS HPSNT_06365 NC_017376.1 1299174 1300163 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 1299174..1300163 Helicobacter pylori SNT49 12367681 YP_005787384.1 CDS HPSNT_06370 NC_017376.1 1300174 1300836 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1300174..1300836 Helicobacter pylori SNT49 12367682 YP_005787385.1 CDS HPSNT_06375 NC_017376.1 1300829 1301377 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1300829..1301377 Helicobacter pylori SNT49 12367683 YP_005787386.1 CDS HPSNT_06380 NC_017376.1 1301374 1301676 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1301374..1301676 Helicobacter pylori SNT49 12367684 YP_005787387.1 CDS HPSNT_06385 NC_017376.1 1301679 1303517 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1301679..1303517 Helicobacter pylori SNT49 12367685 YP_005787388.1 CDS HPSNT_06390 NC_017376.1 1303521 1305059 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1303521..1305059 Helicobacter pylori SNT49 12367686 YP_005787389.1 CDS HPSNT_06395 NC_017376.1 1305046 1306518 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 1305046..1306518 Helicobacter pylori SNT49 12367687 YP_005787390.1 CDS HPSNT_06400 NC_017376.1 1306508 1308913 D COG0457 FOG: TPR repeat; paralysed flagella protein PflA 1306508..1308913 Helicobacter pylori SNT49 12367688 YP_005787391.1 CDS HPSNT_06405 NC_017376.1 1308915 1310318 D COG1109 Phosphomannomutase; phosphomannomutase 1308915..1310318 Helicobacter pylori SNT49 12367689 YP_005787392.1 CDS HPSNT_06410 NC_017376.1 1310494 1310682 D hypothetical protein 1310494..1310682 Helicobacter pylori SNT49 12367690 YP_005787393.1 CDS HPSNT_06415 NC_017376.1 1310660 1310761 D hypothetical protein 1310660..1310761 Helicobacter pylori SNT49 12367691 YP_005787394.1 CDS trpA NC_017376.1 1311050 1311838 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1311050..1311838) Helicobacter pylori SNT49 12367692 YP_005787395.1 CDS HPSNT_06425 NC_017376.1 1311835 1313016 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1311835..1313016) Helicobacter pylori SNT49 12367693 YP_005787396.1 CDS HPSNT_06430 NC_017376.1 1313018 1314376 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1313018..1314376) Helicobacter pylori SNT49 12367694 YP_005787397.1 CDS trpD NC_017376.1 1314369 1315376 R COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1314369..1315376) Helicobacter pylori SNT49 12367695 YP_005787398.1 CDS HPSNT_06440 NC_017376.1 1315373 1315957 R COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II complement(1315373..1315957) Helicobacter pylori SNT49 12367696 YP_005787399.1 CDS HPSNT_06445 NC_017376.1 1315954 1317456 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1315954..1317456) Helicobacter pylori SNT49 12367697 YP_005787400.1 CDS HPSNT_06450 NC_017376.1 1317608 1318666 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1317608..1318666) Helicobacter pylori SNT49 12367698 YP_005787401.1 CDS HPSNT_06455 NC_017376.1 1318734 1319426 R COG2503 Predicted secreted acid phosphatase; hypothetical protein complement(1318734..1319426) Helicobacter pylori SNT49 12367699 YP_005787402.1 CDS HPSNT_06460 NC_017376.1 1319595 1320143 D COG2353 Uncharacterized conserved protein; hypothetical protein 1319595..1320143 Helicobacter pylori SNT49 12367700 YP_005787403.1 CDS HPSNT_06465 NC_017376.1 1320207 1320860 R COG0819 Putative transcription activator; transcriptional regulator complement(1320207..1320860) Helicobacter pylori SNT49 12367701 YP_005787404.1 CDS HPSNT_06470 NC_017376.1 1321587 1321922 D hypothetical protein 1321587..1321922 Helicobacter pylori SNT49 12367702 YP_005787405.1 CDS HPSNT_06475 NC_017376.1 1321946 1322410 D hypothetical protein 1321946..1322410 Helicobacter pylori SNT49 12367703 YP_005787406.1 CDS HPSNT_06480 NC_017376.1 1322597 1323259 D COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1322597..1323259 Helicobacter pylori SNT49 12367704 YP_005787407.1 CDS HPSNT_06485 NC_017376.1 1323247 1323861 D COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1323247..1323861 Helicobacter pylori SNT49 12367705 YP_005787408.1 CDS rplQ NC_017376.1 1324483 1324833 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(1324483..1324833) Helicobacter pylori SNT49 12367706 YP_005787409.1 CDS HPSNT_06495 NC_017376.1 1324833 1325867 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1324833..1325867) Helicobacter pylori SNT49 12367707 YP_005787410.1 CDS rpsD NC_017376.1 1325879 1326505 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(1325879..1326505) Helicobacter pylori SNT49 12367708 YP_005787411.1 CDS HPSNT_06505 NC_017376.1 1326515 1326910 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(1326515..1326910) Helicobacter pylori SNT49 12367709 YP_005787412.1 CDS rpsM NC_017376.1 1326933 1327295 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(1326933..1327295) Helicobacter pylori SNT49 12367710 YP_005787413.1 CDS HPSNT_06515 NC_017376.1 1327299 1327412 R COG0257 Ribosomal protein L36; hypothetical protein complement(1327299..1327412) Helicobacter pylori SNT49 12367711 YP_005787414.1 CDS infA NC_017376.1 1327491 1327709 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1327491..1327709) Helicobacter pylori SNT49 12367712 YP_005787415.1 CDS HPSNT_06525 NC_017376.1 1327709 1328470 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1327709..1328470) Helicobacter pylori SNT49 12367713 YP_005787416.1 CDS secY NC_017376.1 1328470 1329732 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(1328470..1329732) Helicobacter pylori SNT49 12367714 YP_005787417.1 CDS rplO NC_017376.1 1329775 1330176 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(1329775..1330176) Helicobacter pylori SNT49 12367715 YP_005787418.1 CDS rpsE NC_017376.1 1330196 1330639 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(1330196..1330639) Helicobacter pylori SNT49 12367716 YP_005787419.1 CDS rplR NC_017376.1 1330654 1331010 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(1330654..1331010) Helicobacter pylori SNT49 12367717 YP_005787420.1 CDS rplF NC_017376.1 1331024 1331560 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1331024..1331560) Helicobacter pylori SNT49 12367718 YP_005787421.1 CDS rpsH NC_017376.1 1331571 1331966 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(1331571..1331966) Helicobacter pylori SNT49 12367719 YP_005787422.1 CDS rpsN NC_017376.1 1331976 1332161 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(1331976..1332161) Helicobacter pylori SNT49 12367720 YP_005787423.1 CDS rplE NC_017376.1 1332171 1332716 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(1332171..1332716) Helicobacter pylori SNT49 12367721 YP_005787424.1 CDS rplX NC_017376.1 1332729 1332950 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(1332729..1332950) Helicobacter pylori SNT49 12367722 YP_005787425.1 CDS rplN NC_017376.1 1332950 1333318 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(1332950..1333318) Helicobacter pylori SNT49 12367723 YP_005787426.1 CDS rpsQ NC_017376.1 1333321 1333581 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(1333321..1333581) Helicobacter pylori SNT49 12367724 YP_005787427.1 CDS HPSNT_06585 NC_017376.1 1333595 1333795 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(1333595..1333795) Helicobacter pylori SNT49 12367725 YP_005787428.1 CDS rplP NC_017376.1 1333782 1334207 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1333782..1334207) Helicobacter pylori SNT49 12367726 YP_005787429.1 CDS rpsC NC_017376.1 1334210 1334914 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(1334210..1334914) Helicobacter pylori SNT49 12367727 YP_005787430.1 CDS rplV NC_017376.1 1334918 1335286 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(1334918..1335286) Helicobacter pylori SNT49 12367728 YP_005787431.1 CDS rpsS NC_017376.1 1335296 1335577 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(1335296..1335577) Helicobacter pylori SNT49 12367729 YP_005787432.1 CDS rplB NC_017376.1 1335588 1336418 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(1335588..1336418) Helicobacter pylori SNT49 12367730 YP_005787433.1 CDS rplW NC_017376.1 1336434 1336715 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(1336434..1336715) Helicobacter pylori SNT49 12367731 YP_005787434.1 CDS rplD NC_017376.1 1336719 1337366 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(1336719..1337366) Helicobacter pylori SNT49 12367732 YP_005787435.1 CDS rplC NC_017376.1 1337402 1337977 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(1337402..1337977) Helicobacter pylori SNT49 12367733 YP_005787436.1 CDS rpsJ NC_017376.1 1338014 1338328 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(1338014..1338328) Helicobacter pylori SNT49 12367734 YP_005787437.1 CDS HPSNT_06635 NC_017376.1 1338538 1339626 D COG1373 Predicted ATPase (AAA+ superfamily); hypothetical protein 1338538..1339626 Helicobacter pylori SNT49 12367735 YP_005787438.1 CDS HPSNT_06640 NC_017376.1 1339840 1340418 D hypothetical protein 1339840..1340418 Helicobacter pylori SNT49 12367736 YP_005787439.1 CDS rnhB NC_017376.1 1340392 1341006 R COG0164 Ribonuclease HII; ribonuclease HII complement(1340392..1341006) Helicobacter pylori SNT49 12367737 YP_005787440.1 CDS fumC NC_017376.1 1341063 1342454 R COG0114 Fumarase; fumarate hydratase complement(1341063..1342454) Helicobacter pylori SNT49 12367738 YP_005787441.1 CDS HPSNT_06655 NC_017376.1 1342628 1343005 D hypothetical protein 1342628..1343005 Helicobacter pylori SNT49 12367739 YP_005787442.1 CDS HPSNT_06660 NC_017376.1 1343049 1344248 D hypothetical protein 1343049..1344248 Helicobacter pylori SNT49 12367740 YP_005787443.1 CDS HPSNT_06665 NC_017376.1 1344245 1345252 D COG0845 Membrane-fusion protein; cation efflux system protein 1344245..1345252 Helicobacter pylori SNT49 12367741 YP_005787444.1 CDS HPSNT_06670 NC_017376.1 1345253 1348366 D COG3696 Putative silver efflux pump; copper efflux system membrane protein CusA 1345253..1348366 Helicobacter pylori SNT49 12367742 YP_005787445.1 CDS HPSNT_06675 NC_017376.1 1348363 1348710 R COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein complement(1348363..1348710) Helicobacter pylori SNT49 12367743 YP_005787446.1 CDS HPSNT_06680 NC_017376.1 1348704 1349390 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); branched-chain amino acid transport protein AzlC; membrane protein complement(1348704..1349390) Helicobacter pylori SNT49 12367744 YP_005787447.1 CDS HPSNT_06685 NC_017376.1 1349401 1350510 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(1349401..1350510) Helicobacter pylori SNT49 12367745 YP_005787448.1 CDS HPSNT_06690 NC_017376.1 1350635 1351765 D hypothetical protein 1350635..1351765 Helicobacter pylori SNT49 12367746 YP_005787449.1 CDS mnmA NC_017376.1 1351809 1352837 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(1351809..1352837) Helicobacter pylori SNT49 12367747 YP_005787450.1 CDS HPSNT_06700 NC_017376.1 1352978 1353739 D COG2214 DnaJ-class molecular chaperone; hypothetical protein 1352978..1353739 Helicobacter pylori SNT49 12367748 YP_005787451.1 CDS HPSNT_06705 NC_017376.1 1353736 1354251 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase complement(1353736..1354251) Helicobacter pylori SNT49 12367749 YP_005787452.1 CDS HPSNT_06710 NC_017376.1 1354244 1354690 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(1354244..1354690) Helicobacter pylori SNT49 12367750 YP_005787453.1 CDS HPSNT_06715 NC_017376.1 1355014 1355451 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1355014..1355451 Helicobacter pylori SNT49 12367751 YP_005787454.1 CDS HPSNT_06720 NC_017376.1 1355448 1355837 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1355448..1355837 Helicobacter pylori SNT49 12367752 YP_005787455.1 CDS HPSNT_06725 NC_017376.1 1355803 1356669 D COG0810 Periplasmic protein TonB, links inner and outer membranes; siderophore-mediated iron transport protein 1355803..1356669 Helicobacter pylori SNT49 12367753 YP_005787456.1 CDS HPSNT_06730 NC_017376.1 1356860 1358752 D outer membrane protein HopQ 1356860..1358752 Helicobacter pylori SNT49 12367754 YP_005787457.1 CDS HPSNT_06735 NC_017376.1 1358793 1359521 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1358793..1359521) Helicobacter pylori SNT49 12367755 YP_005787458.1 CDS HPSNT_06740 NC_017376.1 1359528 1360484 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein complement(1359528..1360484) Helicobacter pylori SNT49 12367756 YP_005787459.1 CDS pgk NC_017376.1 1360500 1361708 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(1360500..1361708) Helicobacter pylori SNT49 12367757 YP_005787460.1 CDS HPSNT_06750 NC_017376.1 1361724 1362716 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1361724..1362716) Helicobacter pylori SNT49 12367758 YP_005787461.1 CDS HPSNT_06755 NC_017376.1 1362805 1363506 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(1362805..1363506) Helicobacter pylori SNT49 12367759 YP_005787462.1 CDS HPSNT_06760 NC_017376.1 1363503 1364225 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1363503..1364225) Helicobacter pylori SNT49 12367760 YP_005787463.1 CDS HPSNT_06765 NC_017376.1 1364212 1365327 R hypothetical protein complement(1364212..1365327) Helicobacter pylori SNT49 12367761 YP_005787464.1 CDS HPSNT_06770 NC_017376.1 1365390 1366754 R COG0793 Periplasmic protease; carboxyl-terminal protease complement(1365390..1366754) Helicobacter pylori SNT49 12367762 YP_005787465.1 CDS HPSNT_06775 NC_017376.1 1367001 1367933 R COG4889 Predicted helicase; adenine specific DNA methyltransferase complement(1367001..1367933) Helicobacter pylori SNT49 12367763 YP_005787466.1 CDS HPSNT_06780 NC_017376.1 1367896 1370454 R COG0286 Type I restriction-modification system methyltransferase subunit; adenine specific DNA methyltransferase complement(1367896..1370454) Helicobacter pylori SNT49 12367764 YP_005787467.1 CDS HPSNT_06785 NC_017376.1 1370479 1371300 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1370479..1371300) Helicobacter pylori SNT49 12367765 YP_005787468.1 CDS HPSNT_06790 NC_017376.1 1371300 1372304 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1371300..1372304) Helicobacter pylori SNT49 12367766 YP_005787469.1 CDS HPSNT_06795 NC_017376.1 1372294 1373097 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(1372294..1373097) Helicobacter pylori SNT49 12367767 YP_005787470.1 CDS HPSNT_06800 NC_017376.1 1373091 1373597 R hypothetical protein complement(1373091..1373597) Helicobacter pylori SNT49 12367768 YP_005787471.1 CDS HPSNT_06805 NC_017376.1 1373610 1374104 R hypothetical protein complement(1373610..1374104) Helicobacter pylori SNT49 12367769 YP_005787472.1 CDS ubiA NC_017376.1 1374097 1374981 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase complement(1374097..1374981) Helicobacter pylori SNT49 12367770 YP_005787473.1 CDS HPSNT_06815 NC_017376.1 1375010 1376323 R COG0658 Predicted membrane metal-binding protein; competence locus E complement(1375010..1376323) Helicobacter pylori SNT49 12367771 YP_005787474.1 CDS HPSNT_06820 NC_017376.1 1376320 1377786 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1376320..1377786) Helicobacter pylori SNT49 12367772 YP_005787475.1 CDS HPSNT_06825 NC_017376.1 1377797 1379191 R COG0062 Uncharacterized conserved protein; hypothetical protein complement(1377797..1379191) Helicobacter pylori SNT49 12367773 YP_005787476.1 CDS HPSNT_06830 NC_017376.1 1379194 1380312 R COG0642 Signal transduction histidine kinase; signal-transducing protein, histidine kinase complement(1379194..1380312) Helicobacter pylori SNT49 12367774 YP_005787477.1 CDS HPSNT_06835 NC_017376.1 1380362 1381003 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator complement(1380362..1381003) Helicobacter pylori SNT49 12367775 YP_005787478.1 CDS HPSNT_06840 NC_017376.1 1381074 1383326 D COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1381074..1383326 Helicobacter pylori SNT49 12367776 YP_005787479.1 CDS HPSNT_06845 NC_017376.1 1383336 1386212 D COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type III restriction enzyme R protein 1383336..1386212 Helicobacter pylori SNT49 12367777 YP_005787480.1 CDS HPSNT_06850 NC_017376.1 1386245 1386991 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1386245..1386991) Helicobacter pylori SNT49 12367778 YP_005787481.1 CDS HPSNT_06855 NC_017376.1 1386995 1388038 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1386995..1388038) Helicobacter pylori SNT49 12367779 YP_005787482.1 CDS clpX NC_017376.1 1388081 1389427 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1388081..1389427) Helicobacter pylori SNT49 12367780 YP_005787483.1 CDS HPSNT_06865 NC_017376.1 1389429 1390241 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1389429..1390241) Helicobacter pylori SNT49 12367781 YP_005787484.1 CDS fabZ NC_017376.1 1390245 1390724 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1390245..1390724) Helicobacter pylori SNT49 12367782 YP_005787485.1 CDS HPSNT_06875 NC_017376.1 1390906 1391295 R COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW complement(1390906..1391295) Helicobacter pylori SNT49 12367783 YP_005787486.1 CDS HPSNT_06880 NC_017376.1 1391513 1391623 D hypothetical protein 1391513..1391623 Helicobacter pylori SNT49 12367784 YP_005787487.1 CDS HPSNT_06885 NC_017376.1 1391703 1392365 D COG4105 DNA uptake lipoprotein; putative lipoprotein 1391703..1392365 Helicobacter pylori SNT49 12367785 YP_005787488.1 CDS HPSNT_06890 NC_017376.1 1392408 1394897 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1392408..1394897 Helicobacter pylori SNT49 12367786 YP_005787489.1 CDS HPSNT_06895 NC_017376.1 1394922 1395749 D COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1394922..1395749 Helicobacter pylori SNT49 12367787 YP_005787490.1 CDS HPSNT_06900 NC_017376.1 1396074 1396193 R hypothetical protein complement(1396074..1396193) Helicobacter pylori SNT49 12367788 YP_005787491.1 CDS HPSNT_06905 NC_017376.1 1396207 1397055 R COG1864 DNA/RNA endonuclease G, NUC1; putative endonuclease complement(1396207..1397055) Helicobacter pylori SNT49 12367789 YP_005787492.1 CDS HPSNT_06910 NC_017376.1 1397181 1399085 R COG2189 Adenine specific DNA methylase Mod; putative type III restriction enzyme M protein complement(1397181..1399085) Helicobacter pylori SNT49 12367790 YP_005787493.1 CDS HPSNT_06915 NC_017376.1 1399088 1401406 R COG3421 Uncharacterized protein conserved in bacteria; putative type III restriction enzyme R protein complement(1399088..1401406) Helicobacter pylori SNT49 12367791 YP_005787494.1 CDS HPSNT_06920 NC_017376.1 1401823 1402671 D COG0502 Biotin synthase and related enzymes; biotin synthase 1401823..1402671 Helicobacter pylori SNT49 12367792 YP_005787495.1 CDS HPSNT_06925 NC_017376.1 1402671 1403549 D COG1295 Predicted membrane protein; putative ribonuclease N 1402671..1403549 Helicobacter pylori SNT49 12367793 YP_005787496.1 CDS HPSNT_06930 NC_017376.1 1407986 1408081 D hypothetical protein 1407986..1408081 Helicobacter pylori SNT49 12367796 YP_005787497.1 CDS HPSNT_06935 NC_017376.1 1408897 1409385 D COG0223 Methionyl-tRNA formyltransferase; hypothetical protein 1408897..1409385 Helicobacter pylori SNT49 12367797 YP_005787498.1 CDS HPSNT_06950 NC_017376.1 1411346 1412245 D hypothetical protein 1411346..1412245 Helicobacter pylori SNT49 12367798 YP_005787499.1 CDS HPSNT_06955 NC_017376.1 1412367 1412813 R COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase complement(1412367..1412813) Helicobacter pylori SNT49 12367799 YP_005787500.1 CDS HPSNT_06960 NC_017376.1 1412873 1413214 D COG0799 Uncharacterized homolog of plant Iojap protein; iojap-like protein 1412873..1413214 Helicobacter pylori SNT49 12367800 YP_005787501.1 CDS miaA NC_017376.1 1413285 1414115 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1413285..1414115 Helicobacter pylori SNT49 12367801 YP_005787502.1 CDS HPSNT_06970 NC_017376.1 1414120 1415223 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase RfaJ 1414120..1415223 Helicobacter pylori SNT49 12367802 YP_005787503.1 CDS murB NC_017376.1 1416956 1417735 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1416956..1417735) Helicobacter pylori SNT49 12367804 YP_005787504.1 CDS fliQ NC_017376.1 1417739 1418005 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1417739..1418005) Helicobacter pylori SNT49 12367806 YP_005787505.1 CDS fliI NC_017376.1 1418016 1419320 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1418016..1419320) Helicobacter pylori SNT49 12367807 YP_005787506.1 CDS HPSNT_07000 NC_017376.1 1419321 1420235 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase complement(1419321..1420235) Helicobacter pylori SNT49 12367808 YP_005787507.1 CDS ileS NC_017376.1 1420252 1423014 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1420252..1423014) Helicobacter pylori SNT49 12367809 YP_005787508.1 CDS HPSNT_07010 NC_017376.1 1423038 1423295 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); hypothetical protein complement(1423038..1423295) Helicobacter pylori SNT49 12367810 YP_005787509.1 CDS HPSNT_07015 NC_017376.1 1423397 1424017 D hypothetical protein 1423397..1424017 Helicobacter pylori SNT49 12367811 YP_005787510.1 CDS HPSNT_07020 NC_017376.1 1424392 1424649 R hypothetical protein complement(1424392..1424649) Helicobacter pylori SNT49 12367812 YP_005787511.1 CDS HPSNT_07025 NC_017376.1 1424857 1425930 R COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N complement(1424857..1425930) Helicobacter pylori SNT49 12367813 YP_005787512.1 CDS HPSNT_07030 NC_017376.1 1425927 1426916 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; polysialic acid capsule expression protein complement(1425927..1426916) Helicobacter pylori SNT49 12367814 YP_005787513.1 CDS HPSNT_07035 NC_017376.1 1426900 1428978 R COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; ribonuclease J complement(1426900..1428978) Helicobacter pylori SNT49 12367815 YP_005787514.1 CDS ksgA NC_017376.1 1429016 1429831 R COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase complement(1429016..1429831) Helicobacter pylori SNT49 12367816 YP_005787515.1 CDS HPSNT_07045 NC_017376.1 1429893 1430030 D hypothetical protein 1429893..1430030 Helicobacter pylori SNT49 12367817 YP_005787516.1 CDS HPSNT_07050 NC_017376.1 1430094 1430345 D hypothetical protein 1430094..1430345 Helicobacter pylori SNT49 12367818 YP_005787517.1 CDS HPSNT_07055 NC_017376.1 1430621 1430713 D hypothetical protein 1430621..1430713 Helicobacter pylori SNT49 12367819 YP_005787518.1 CDS HPSNT_07060 NC_017376.1 1430995 1431222 R COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme specificity protein complement(1430995..1431222) Helicobacter pylori SNT49 12367820 YP_005787519.1 CDS HPSNT_07065 NC_017376.1 1431320 1432072 R COG0732 Restriction endonuclease S subunits; type I R-M system specificity subunit complement(1431320..1432072) Helicobacter pylori SNT49 12367821 YP_005787520.1 CDS HPSNT_07070 NC_017376.1 1432195 1433076 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(1432195..1433076) Helicobacter pylori SNT49 12367822 YP_005787521.1 CDS HPSNT_07075 NC_017376.1 1433079 1433957 R COG0616 Periplasmic serine proteases (ClpP class); protease IV (PspA) complement(1433079..1433957) Helicobacter pylori SNT49 12367823 YP_005787522.1 CDS HPSNT_07080 NC_017376.1 1434028 1434276 D COG0621 2-methylthioadenine synthetase; hypothetical protein 1434028..1434276 Helicobacter pylori SNT49 12367824 YP_005787523.1 CDS HPSNT_07105 NC_017376.1 1437273 1437554 R hypothetical protein complement(1437273..1437554) Helicobacter pylori SNT49 12367825 YP_005787524.1 CDS HPSNT_07110 NC_017376.1 1437551 1437694 R hypothetical protein complement(1437551..1437694) Helicobacter pylori SNT49 12367826 YP_005787525.1 CDS HPSNT_07115 NC_017376.1 1439976 1440755 R hypothetical protein complement(1439976..1440755) Helicobacter pylori SNT49 12367828 YP_005787526.1 CDS HPSNT_07120 NC_017376.1 1440879 1441367 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase B 1440879..1441367 Helicobacter pylori SNT49 12367829 YP_005787527.1 CDS HPSNT_07125 NC_017376.1 1441385 1441615 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1441385..1441615 Helicobacter pylori SNT49 12367830 YP_005787528.1 CDS HPSNT_07130 NC_017376.1 1441615 1442418 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1441615..1442418 Helicobacter pylori SNT49 12367831 YP_005787529.1 CDS smpB NC_017376.1 1442415 1442873 D COG0691 tmRNA-binding protein; SsrA-binding protein 1442415..1442873 Helicobacter pylori SNT49 12367832 YP_005787530.1 CDS HPSNT_07140 NC_017376.1 1442876 1443328 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1442876..1443328 Helicobacter pylori SNT49 12367833 YP_005787531.1 CDS HPSNT_07145 NC_017376.1 1443339 1443740 D COG0848 Biopolymer transport protein; biopolymer transport protein 1443339..1443740 Helicobacter pylori SNT49 12367834 YP_005787532.1 CDS rpmH NC_017376.1 1443812 1443946 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1443812..1443946 Helicobacter pylori SNT49 12367835 YP_005787533.1 CDS HPSNT_07155 NC_017376.1 1443906 1444391 D COG0594 RNase P protein component; ribonuclease P protein component 1443906..1444391 Helicobacter pylori SNT49 12367837 YP_005787534.1 CDS HPSNT_07160 NC_017376.1 1444378 1444731 D COG0759 Uncharacterized conserved protein; hypothetical protein 1444378..1444731 Helicobacter pylori SNT49 12367838 YP_005787535.1 CDS HPSNT_07165 NC_017376.1 1444737 1446383 D COG0706 Preprotein translocase subunit YidC; membrane protein insertase 1444737..1446383 Helicobacter pylori SNT49 12367839 YP_005787536.1 CDS HPSNT_07170 NC_017376.1 1446383 1447177 D COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; hypothetical protein 1446383..1447177 Helicobacter pylori SNT49 12367840 YP_005787537.1 CDS trmE NC_017376.1 1447170 1448522 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1447170..1448522 Helicobacter pylori SNT49 12367841 YP_005787538.1 CDS HPSNT_07180 NC_017376.1 1448727 1450967 D outer membrane protein HomD 1448727..1450967 Helicobacter pylori SNT49 12367842 YP_005787539.1 CDS HPSNT_07185 NC_017376.1 1451033 1451149 R hypothetical protein complement(1451033..1451149) Helicobacter pylori SNT49 12367843 YP_005787540.1 CDS HPSNT_07190 NC_017376.1 1451519 1452430 R hypothetical protein complement(1451519..1452430) Helicobacter pylori SNT49 12367844 YP_005787541.1 CDS HPSNT_07195 NC_017376.1 1452440 1452781 R COG0481 Membrane GTPase LepA; hypothetical protein complement(1452440..1452781) Helicobacter pylori SNT49 12367845 YP_005787542.1 CDS HPSNT_07200 NC_017376.1 1452789 1453316 R membrane-associated lipoprotein complement(1452789..1453316) Helicobacter pylori SNT49 12367846 YP_005787543.1 CDS HPSNT_07205 NC_017376.1 1453340 1453972 R collagen-binding surface adhesin SpaP complement(1453340..1453972) Helicobacter pylori SNT49 12367847 YP_005787544.1 CDS HPSNT_07210 NC_017376.1 1454331 1454645 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(1454331..1454645) Helicobacter pylori SNT49 12367848 YP_005787545.1 CDS HPSNT_07215 NC_017376.1 1454700 1455473 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; hypothetical protein complement(1454700..1455473) Helicobacter pylori SNT49 12367849 YP_005787546.1 CDS dnaE NC_017376.1 1455470 1459105 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1455470..1459105) Helicobacter pylori SNT49 12367850 YP_005787547.1 CDS HPSNT_07225 NC_017376.1 1459253 1460305 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1459253..1460305 Helicobacter pylori SNT49 12367851 YP_005787548.1 CDS HPSNT_07230 NC_017376.1 1460302 1460412 D hypothetical protein 1460302..1460412 Helicobacter pylori SNT49 12367852 YP_005787549.1 CDS HPSNT_07235 NC_017376.1 1460482 1461069 R COG3187 Heat shock protein; putative secreted motility protein complement(1460482..1461069) Helicobacter pylori SNT49 12367853 YP_005787550.1 CDS HPSNT_07240 NC_017376.1 1461088 1461765 R hypothetical protein complement(1461088..1461765) Helicobacter pylori SNT49 12367854 YP_005787551.1 CDS HPSNT_07245 NC_017376.1 1461768 1462583 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein complement(1461768..1462583) Helicobacter pylori SNT49 12367855 YP_005787552.1 CDS HPSNT_07250 NC_017376.1 1462568 1463353 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(1462568..1463353) Helicobacter pylori SNT49 12367856 YP_005787553.1 CDS HPSNT_07255 NC_017376.1 1463353 1464486 R COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; ABC transporter permease complement(1463353..1464486) Helicobacter pylori SNT49 12367857 YP_005787554.1 CDS HPSNT_07260 NC_017376.1 1464632 1465327 D outer membrane protein 1464632..1465327 Helicobacter pylori SNT49 12367858 YP_005787555.1 CDS HPSNT_07265 NC_017376.1 1465332 1466354 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(1465332..1466354) Helicobacter pylori SNT49 12367859 YP_005787556.1 CDS HPSNT_07270 NC_017376.1 1466406 1467152 R outer membrane protein HorJ complement(1466406..1467152) Helicobacter pylori SNT49 12367860 YP_005787557.1 CDS HPSNT_07275 NC_017376.1 1467267 1469930 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(1467267..1469930) Helicobacter pylori SNT49 12367861 YP_005787558.1 CDS HPSNT_07280 NC_017376.1 1469996 1470613 R hypothetical protein complement(1469996..1470613) Helicobacter pylori SNT49 12367862 YP_005787559.1 CDS HPSNT_07285 NC_017376.1 1470585 1471223 R type II restriction modification enzyme methyltransferase complement(1470585..1471223) Helicobacter pylori SNT49 12367863 YP_005787560.1 CDS HPSNT_07290 NC_017376.1 1471220 1473259 R COG0286 Type I restriction-modification system methyltransferase subunit; restriction enzyme BcgI alpha chain-like protein complement(1471220..1473259) Helicobacter pylori SNT49 12367864 YP_005787561.1 CDS HPSNT_07295 NC_017376.1 1473292 1473867 R hypothetical protein complement(1473292..1473867) Helicobacter pylori SNT49 12367865 YP_005787562.1 CDS tmk NC_017376.1 1473855 1474430 R COG0125 Thymidylate kinase; thymidylate kinase complement(1473855..1474430) Helicobacter pylori SNT49 12367866 YP_005787563.1 CDS coaD NC_017376.1 1474432 1474905 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(1474432..1474905) Helicobacter pylori SNT49 12367867 YP_005787564.1 CDS HPSNT_07310 NC_017376.1 1474905 1475468 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1474905..1475468) Helicobacter pylori SNT49 12367868 YP_005787565.1 CDS HPSNT_07315 NC_017376.1 1475449 1475553 D hypothetical protein 1475449..1475553 Helicobacter pylori SNT49 12367869 YP_005787566.1 CDS flgA NC_017376.1 1475478 1476134 R COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA complement(1475478..1476134) Helicobacter pylori SNT49 12367870 YP_005787567.1 CDS HPSNT_07325 NC_017376.1 1476131 1478176 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase II (uvrD) complement(1476131..1478176) Helicobacter pylori SNT49 12367871 YP_005787568.1 CDS HPSNT_07330 NC_017376.1 1478176 1480716 R COG0457 FOG: TPR repeat; hypothetical protein complement(1478176..1480716) Helicobacter pylori SNT49 12367872 YP_005787569.1 CDS HPSNT_07335 NC_017376.1 1480726 1481973 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1480726..1481973) Helicobacter pylori SNT49 12367873 YP_005787570.1 CDS HPSNT_07340 NC_017376.1 1481974 1482771 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1481974..1482771) Helicobacter pylori SNT49 12367874 YP_005787571.1 CDS HPSNT_07345 NC_017376.1 1482775 1483035 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1482775..1483035) Helicobacter pylori SNT49 12367875 YP_005787572.1 CDS ubiE NC_017376.1 1483045 1483776 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(1483045..1483776) Helicobacter pylori SNT49 12367876 YP_005787573.1 CDS HPSNT_07355 NC_017376.1 1483803 1484249 R COG1981 Predicted membrane protein; hypothetical protein complement(1483803..1484249) Helicobacter pylori SNT49 12367877 YP_005787574.1 CDS HPSNT_07360 NC_017376.1 1484260 1484832 R COG1739 Uncharacterized conserved protein; X-Pro dipeptidase complement(1484260..1484832) Helicobacter pylori SNT49 12367878 YP_005787575.1 CDS HPSNT_07365 NC_017376.1 1484819 1485949 R COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease complement(1484819..1485949) Helicobacter pylori SNT49 12367879 YP_005787576.1 CDS HPSNT_07370 NC_017376.1 1485946 1487043 R COG0842 ABC-type multidrug transport system, permease component; ABC transporter permease complement(1485946..1487043) Helicobacter pylori SNT49 12367880 YP_005787577.1 CDS HPSNT_07375 NC_017376.1 1487055 1488044 R COG0845 Membrane-fusion protein; hypothetical protein complement(1487055..1488044) Helicobacter pylori SNT49 12367881 YP_005787578.1 CDS HPSNT_07380 NC_017376.1 1488056 1489588 R COG1538 Outer membrane protein; lipase-like protein complement(1488056..1489588) Helicobacter pylori SNT49 12367882 YP_005787579.1 CDS HPSNT_07385 NC_017376.1 1489585 1490934 R COG1253 Hemolysins and related proteins containing CBS domains; TlyC-like hemolysin; membrane protein complement(1489585..1490934) Helicobacter pylori SNT49 12367883 YP_005787580.1 CDS HPSNT_07390 NC_017376.1 1491042 1492643 R COG0306 Phosphate/sulphate permeases; membrane protein; phosphate transporter complement(1491042..1492643) Helicobacter pylori SNT49 12367884 YP_005787581.1 CDS HPSNT_07395 NC_017376.1 1492782 1493051 D COG0694 Thioredoxin-like proteins and domains; NifU 1492782..1493051 Helicobacter pylori SNT49 12367885 YP_005787582.1 CDS HPSNT_07400 NC_017376.1 1493063 1493674 D hypothetical protein 1493063..1493674 Helicobacter pylori SNT49 12367886 YP_005787583.1 CDS murE NC_017376.1 1493678 1495021 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1493678..1495021 Helicobacter pylori SNT49 12367887 YP_005787584.1 CDS HPSNT_07410 NC_017376.1 1495025 1495975 D COG0176 Transaldolase; transaldolase 1495025..1495975 Helicobacter pylori SNT49 12367888 YP_005787585.1 CDS HPSNT_07415 NC_017376.1 1496030 1496566 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1496030..1496566 Helicobacter pylori SNT49 12367889 YP_005787586.1 CDS HPSNT_07420 NC_017376.1 1496577 1497137 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1496577..1497137 Helicobacter pylori SNT49 12367890 YP_005787587.1 CDS HPSNT_07425 NC_017376.1 1497192 1498259 D COG0795 Predicted permeases; hypothetical protein 1497192..1498259 Helicobacter pylori SNT49 12367891 YP_005787588.1 CDS HPSNT_07430 NC_017376.1 1498315 1499316 D COG3392 Adenine-specific DNA methylase; type II methylase 1498315..1499316 Helicobacter pylori SNT49 12367892 YP_005787589.1 CDS HPSNT_07435 NC_017376.1 1499367 1500212 D COG0338 Site-specific DNA methylase; DNA adenine methylase 1499367..1500212 Helicobacter pylori SNT49 12367893 YP_005787590.1 CDS HPSNT_07440 NC_017376.1 1500219 1501835 D putative endonuclease 1500219..1501835 Helicobacter pylori SNT49 12367894 YP_005787591.1 CDS HPSNT_07445 NC_017376.1 1501883 1503049 R outer membrane protein (omp32) complement(1501883..1503049) Helicobacter pylori SNT49 12367895 YP_005787592.1 CDS HPSNT_07450 NC_017376.1 1503228 1503665 D COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1503228..1503665 Helicobacter pylori SNT49 12367896 YP_005787593.1 CDS HPSNT_07455 NC_017376.1 1503662 1506028 R COG2217 Cation transport ATPase; putative cation-transporting ATPase CopA complement(1503662..1506028) Helicobacter pylori SNT49 12367897 YP_005787594.1 CDS HPSNT_07460 NC_017376.1 1506054 1506770 R COG4123 Predicted O-methyltransferase; hypothetical protein complement(1506054..1506770) Helicobacter pylori SNT49 12367898 YP_005787595.1 CDS HPSNT_07465 NC_017376.1 1506752 1507786 R COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein (ribG) complement(1506752..1507786) Helicobacter pylori SNT49 12367899 YP_005787596.1 CDS HPSNT_07470 NC_017376.1 1507783 1509009 R COG0786 Na+/glutamate symporter; glutamate permease complement(1507783..1509009) Helicobacter pylori SNT49 12367900 YP_005787597.1 CDS HPSNT_07475 NC_017376.1 1509095 1510294 D COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 1509095..1510294 Helicobacter pylori SNT49 12367901 YP_005787598.1 CDS HPSNT_07480 NC_017376.1 1510304 1511680 R COG0348 Polyferredoxin; ferrodoxin-like protein complement(1510304..1511680) Helicobacter pylori SNT49 12367902 YP_005787599.1 CDS HPSNT_07485 NC_017376.1 1511786 1512448 D COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1511786..1512448 Helicobacter pylori SNT49 12367903 YP_005787600.1 CDS HPSNT_07490 NC_017376.1 1512445 1512798 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1512445..1512798 Helicobacter pylori SNT49 12367904 YP_005787601.1 CDS HPSNT_07495 NC_017376.1 1512782 1513108 D FrpB-like protein 1512782..1513108 Helicobacter pylori SNT49 12367905 YP_005787602.1 CDS HPSNT_07500 NC_017376.1 1513276 1515909 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1513276..1515909 Helicobacter pylori SNT49 12367906 YP_005787603.1 CDS HPSNT_07505 NC_017376.1 1516139 1517311 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1516139..1517311 Helicobacter pylori SNT49 12367907 YP_005787604.1 CDS nusA NC_017376.1 1517407 1518594 D COG0195 Transcription elongation factor; transcription elongation factor NusA 1517407..1518594 Helicobacter pylori SNT49 12367908 YP_005787605.1 CDS HPSNT_07515 NC_017376.1 1518651 1519334 D hypothetical protein 1518651..1519334 Helicobacter pylori SNT49 12367909 YP_005787606.1 CDS HPSNT_07520 NC_017376.1 1519488 1520021 R hypothetical protein complement(1519488..1520021) Helicobacter pylori SNT49 12367910 YP_005787607.1 CDS HPSNT_07525 NC_017376.1 1520022 1523819 R COG1002 Type II restriction enzyme, methylase subunits; type IIS restriction-modification protein complement(1520022..1523819) Helicobacter pylori SNT49 12367911 YP_005787608.1 CDS HPSNT_07530 NC_017376.1 1523939 1526764 R COG3587 Restriction endonuclease; type III R-M system restriction enzyme complement(1523939..1526764) Helicobacter pylori SNT49 12367912 YP_005787609.1 CDS HPSNT_07535 NC_017376.1 1526845 1527432 R COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme complement(1526845..1527432) Helicobacter pylori SNT49 12367913 YP_005787610.1 CDS HPSNT_07540 NC_017376.1 1527429 1528715 R COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme complement(1527429..1528715) Helicobacter pylori SNT49 12367914 YP_005787611.1 CDS HPSNT_07545 NC_017376.1 1528759 1530630 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(1528759..1530630) Helicobacter pylori SNT49 12367915 YP_005787612.1 CDS HPSNT_07550 NC_017376.1 1530712 1531059 D hypothetical protein 1530712..1531059 Helicobacter pylori SNT49 12367916 YP_005787613.1 CDS HPSNT_07555 NC_017376.1 1531063 1531698 D hypothetical protein 1531063..1531698 Helicobacter pylori SNT49 12367917 YP_005787614.1 CDS HPSNT_07560 NC_017376.1 1531695 1532447 R COG0708 Exonuclease III; exodeoxyribonuclease III complement(1531695..1532447) Helicobacter pylori SNT49 12367918 YP_005787615.1 CDS HPSNT_07565 NC_017376.1 1532627 1534069 R hypothetical protein complement(1532627..1534069) Helicobacter pylori SNT49 12367920 YP_005787616.1 CDS dnaA NC_017376.1 1534298 1535665 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(1534298..1535665) Helicobacter pylori SNT49 12367921 YP_005787617.1 CDS HPSNT_07575 NC_017376.1 1535817 1536359 D COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase 1535817..1536359 Helicobacter pylori SNT49 12367922 YP_005787618.1 CDS HPSNT_07580 NC_017376.1 1536395 1536634 D hypothetical protein 1536395..1536634 Helicobacter pylori SNT49 12367923 YP_005787619.1 CDS HPSNT_07585 NC_017376.1 1536635 1538428 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1536635..1538428 Helicobacter pylori SNT49 12367924 YP_005787620.1 CDS thyX NC_017376.1 1538452 1539078 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1538452..1539078 Helicobacter pylori SNT49 12367925 YP_005787621.1 CDS HPSNT_07595 NC_017376.1 1539239 1539331 D hypothetical protein 1539239..1539331 Helicobacter pylori SNT49 12367926 YP_005787622.1 CDS HPSNT_07600 NC_017376.1 1539517 1539627 R COG0732 Restriction endonuclease S subunits; type I R-M system specificity subunit complement(1539517..1539627) Helicobacter pylori SNT49 12367927 YP_005787623.1 CDS HPSNT_07605 NC_017376.1 1539663 1540133 R COG0732 Restriction endonuclease S subunits; Restriction endonuclease S subunits-like protein complement(1539663..1540133) Helicobacter pylori SNT49 12367928 YP_005787624.1 CDS HPSNT_07620 NC_017376.1 1541365 1541712 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1541365..1541712 Helicobacter pylori SNT49 12367929 YP_005787625.1 CDS HPSNT_07625 NC_017376.1 1541801 1544326 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron(III) dicitrate transport protein (fecA) complement(1541801..1544326) Helicobacter pylori SNT49 12367930 YP_005787626.1 CDS HPSNT_07630 NC_017376.1 1544523 1544696 R hypothetical protein complement(1544523..1544696) Helicobacter pylori SNT49 12367931 YP_005787627.1 CDS HPSNT_07635 NC_017376.1 1544680 1545648 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase complement(1544680..1545648) Helicobacter pylori SNT49 12367932 YP_005787628.1 CDS HPSNT_07640 NC_017376.1 1545852 1546994 D COG0686 Alanine dehydrogenase; alanine dehydrogenase 1545852..1546994 Helicobacter pylori SNT49 12367933 YP_005787629.1 CDS HPSNT_07655 NC_017376.1 1548845 1549573 R outer membrane protein HorL complement(1548845..1549573) Helicobacter pylori SNT49 12367934 YP_005787630.1 CDS HPSNT_07660 NC_017376.1 1549758 1550612 D COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1549758..1550612 Helicobacter pylori SNT49 12367935 YP_005787631.1 CDS HPSNT_07665 NC_017376.1 1550627 1552201 D COG0497 ATPase involved in DNA repair; DNA repair protein 1550627..1552201 Helicobacter pylori SNT49 12367936 YP_005787632.1 CDS HPSNT_07670 NC_017376.1 1552198 1553505 D COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; fibronectin/fibrinogen-binding protein 1552198..1553505 Helicobacter pylori SNT49 12367937 YP_005787633.1 CDS HPSNT_07675 NC_017376.1 1553523 1553819 D hypothetical protein 1553523..1553819 Helicobacter pylori SNT49 12367938 YP_005787634.1 CDS HPSNT_07680 NC_017376.1 1553972 1554139 D hypothetical protein 1553972..1554139 Helicobacter pylori SNT49 12367939 YP_005787635.1 CDS HPSNT_07685 NC_017376.1 1554226 1554318 R hypothetical protein complement(1554226..1554318) Helicobacter pylori SNT49 12367940 YP_005787636.1 CDS HPSNT_07690 NC_017376.1 1554334 1555197 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(1554334..1555197) Helicobacter pylori SNT49 12367941 YP_005787637.1 CDS HPSNT_07695 NC_017376.1 1555175 1555828 R COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(1555175..1555828) Helicobacter pylori SNT49 12367942 YP_005787638.1 CDS HPSNT_07700 NC_017376.1 1555898 1556770 D COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 1555898..1556770 Helicobacter pylori SNT49 12367943 YP_005787639.1 CDS HPSNT_07705 NC_017376.1 1556770 1556973 D hypothetical protein 1556770..1556973 Helicobacter pylori SNT49 12367944 YP_005787640.1 CDS HPSNT_07710 NC_017376.1 1556986 1557882 D COG0827 Adenine-specific DNA methylase; putative type II methylase protein 1556986..1557882 Helicobacter pylori SNT49 12367945 YP_005787641.1 CDS HPSNT_07715 NC_017376.1 1557875 1558606 D hypothetical protein 1557875..1558606 Helicobacter pylori SNT49 12367946 YP_005787642.1 CDS HPSNT_07720 NC_017376.1 1558722 1559579 R COG2857 Cytochrome c1; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit complement(1558722..1559579) Helicobacter pylori SNT49 12367947 YP_005787643.1 CDS HPSNT_07725 NC_017376.1 1559576 1560814 R COG1290 Cytochrome b subunit of the bc complex; ubiquinol-cytochrome c reductase cytochrome b subunit complement(1559576..1560814) Helicobacter pylori SNT49 12367948 YP_005787644.1 CDS HPSNT_07730 NC_017376.1 1560825 1561328 R COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(1560825..1561328) Helicobacter pylori SNT49 12367949 YP_005787645.1 CDS HPSNT_07735 NC_017376.1 1561453 1564452 R COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor complement(1561453..1564452) Helicobacter pylori SNT49 12367950 YP_005787646.1 CDS HPSNT_07740 NC_017376.1 1564456 1564866 R COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein complement(1564456..1564866) Helicobacter pylori SNT49 12367951 YP_005787647.1 CDS HPSNT_07745 NC_017376.1 1564785 1565723 R COG0739 Membrane proteins related to metalloendopeptidases; toxR-activated protein complement(1564785..1565723) Helicobacter pylori SNT49 12367952 YP_005787648.1 CDS HPSNT_07750 NC_017376.1 1565732 1566658 R COG0739 Membrane proteins related to metalloendopeptidases; membrane-bound metallopeptidase complement(1565732..1566658) Helicobacter pylori SNT49 12367953 YP_005787649.1 CDS HPSNT_07755 NC_017376.1 1566658 1567842 R COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC complement(1566658..1567842) Helicobacter pylori SNT49 12367954 YP_005787650.1 CDS HPSNT_07760 NC_017376.1 1567832 1568344 R hypothetical protein complement(1567832..1568344) Helicobacter pylori SNT49 12367955 YP_005787651.1 CDS leuS NC_017376.1 1568341 1570761 R COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(1568341..1570761) Helicobacter pylori SNT49 12367956 YP_005787652.1 CDS HPSNT_07770 NC_017376.1 1570771 1571109 R integral membrane protein complement(1570771..1571109) Helicobacter pylori SNT49 12367957 YP_005787653.1 CDS secF NC_017376.1 1571119 1572090 R COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF complement(1571119..1572090) Helicobacter pylori SNT49 12367958 YP_005787654.1 CDS secD NC_017376.1 1572099 1573676 R COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD complement(1572099..1573676) Helicobacter pylori SNT49 12367959 YP_005787655.1 CDS yajC NC_017376.1 1573673 1574056 R COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC complement(1573673..1574056) Helicobacter pylori SNT49 12367960 YP_005787656.1 CDS nhaA NC_017376.1 1574104 1575420 R COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter complement(1574104..1575420) Helicobacter pylori SNT49 12367961 YP_005787657.1 CDS HPSNT_07795 NC_017376.1 1575444 1578296 R COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB complement(1575444..1578296) Helicobacter pylori SNT49 12367962 YP_005787658.1 CDS rpsB NC_017376.1 1578546 1579340 D COG0052 Ribosomal protein S2; 30S ribosomal protein S2 1578546..1579340 Helicobacter pylori SNT49 12367963 YP_005787659.1 CDS tsf NC_017376.1 1579340 1580407 D COG0264 Translation elongation factor Ts; elongation factor Ts 1579340..1580407 Helicobacter pylori SNT49 12367964 YP_005787660.1 CDS HPSNT_07810 NC_017376.1 1580854 1582701 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; cell division protein complement(1580854..1582701) Helicobacter pylori SNT49 12367965 YP_005787661.1 CDS fliE NC_017376.1 1582857 1583186 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(1582857..1583186) Helicobacter pylori SNT49 12367966 YP_005787662.1 CDS flgC NC_017376.1 1583314 1583799 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1583314..1583799) Helicobacter pylori SNT49 12367967 YP_005787663.1 CDS flgB NC_017376.1 1583812 1584234 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1583812..1584234) Helicobacter pylori SNT49 12367968 YP_005787664.1 CDS HPSNT_07830 NC_017376.1 1584443 1585609 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 1584443..1585609 Helicobacter pylori SNT49 12367969 YP_005787665.1 CDS HPSNT_07835 NC_017376.1 1585633 1586634 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron complex transport system substrate-binding protein complement(1585633..1586634) Helicobacter pylori SNT49 12367970 YP_005787666.1 CDS HPSNT_07840 NC_017376.1 1586876 1587472 D COG0450 Peroxiredoxin; alkyl hydroperoxide reductase subunit C 1586876..1587472 Helicobacter pylori SNT49 12367971 YP_005787667.1 CDS HPSNT_07845 NC_017376.1 1587514 1587621 D hypothetical protein 1587514..1587621 Helicobacter pylori SNT49 12367972 YP_005787668.1 CDS HPSNT_07850 NC_017376.1 1587618 1588433 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1587618..1588433 Helicobacter pylori SNT49 12367973 YP_005787669.1 CDS HPSNT_07855 NC_017376.1 1588870 1590636 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(1588870..1590636) Helicobacter pylori SNT49 12367974 YP_005787670.1 CDS HPSNT_07860 NC_017376.1 1590617 1591060 R hypothetical protein complement(1590617..1591060) Helicobacter pylori SNT49 12367975 YP_005787671.1 CDS engB NC_017376.1 1591073 1591699 R COG0218 Predicted GTPase; GTP-binding protein YsxC complement(1591073..1591699) Helicobacter pylori SNT49 12367976 YP_005787672.1 CDS HPSNT_07870 NC_017376.1 1591696 1592253 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1591696..1592253) Helicobacter pylori SNT49 12367977 YP_005787673.1 CDS HPSNT_07875 NC_017376.1 1592253 1592846 R hypothetical protein complement(1592253..1592846) Helicobacter pylori SNT49 12367978 YP_005787674.1 CDS HPSNT_07880 NC_017376.1 1592821 1593315 R COG1778 Low specificity phosphatase (HAD superfamily); hypothetical protein complement(1592821..1593315) Helicobacter pylori SNT49 12367979 YP_005787675.1 CDS HPSNT_07885 NC_017376.1 1593312 1594259 R COG0797 Lipoproteins; rare lipoprotein A complement(1593312..1594259) Helicobacter pylori SNT49 12367980 YP_005787676.1 CDS HPSNT_07890 NC_017376.1 1594259 1595365 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D complement(1594259..1595365) Helicobacter pylori SNT49 12367981 YP_005787677.1 CDS HPSNT_07895 NC_017376.1 1595456 1596220 R COG0084 Mg-dependent DNase; Mg-dependent DNase complement(1595456..1596220) Helicobacter pylori SNT49 12367982 YP_005787678.1 CDS HPSNT_07900 NC_017376.1 1596295 1596915 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1596295..1596915 Helicobacter pylori SNT49 12367983 YP_005787679.1 CDS HPSNT_07905 NC_017376.1 1596916 1597188 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; hypothetical protein 1596916..1597188 Helicobacter pylori SNT49 12367984 YP_005787680.1 CDS metN NC_017376.1 1597210 1598193 D COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1597210..1598193 Helicobacter pylori SNT49 12367985 YP_005787681.1 CDS HPSNT_07915 NC_017376.1 1598195 1598842 D COG2011 ABC-type metal ion transport system, permease component; ABC transporter permease 1598195..1598842 Helicobacter pylori SNT49 12367986 YP_005787682.1 CDS HPSNT_07920 NC_017376.1 1599034 1599465 R hypothetical protein complement(1599034..1599465) Helicobacter pylori SNT49 12367987 YP_005787683.1 CDS HPSNT_07925 NC_017376.1 1599475 1600071 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1599475..1600071) Helicobacter pylori SNT49 12367988 YP_005787684.1 CDS HPSNT_07930 NC_017376.1 1600071 1601078 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase) complement(1600071..1601078) Helicobacter pylori SNT49 12367989 YP_005787685.1 CDS HPSNT_07935 NC_017376.1 1601219 1602007 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1601219..1602007 Helicobacter pylori SNT49 12367990 YP_005787686.1 CDS pdxA NC_017376.1 1602009 1602932 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1602009..1602932 Helicobacter pylori SNT49 12367991 YP_005787687.1 CDS HPSNT_07945 NC_017376.1 1602997 1604019 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 1602997..1604019 Helicobacter pylori SNT49 12367992 YP_005787688.1 CDS flgG NC_017376.1 1604198 1604986 D COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1604198..1604986 Helicobacter pylori SNT49 12367993 YP_005787689.1 CDS HPSNT_07955 NC_017376.1 1604894 1605046 R hypothetical protein complement(1604894..1605046) Helicobacter pylori SNT49 12367994 YP_005787690.1 CDS HPSNT_07970 NC_017376.1 1606292 1606432 R hypothetical protein complement(1606292..1606432) Helicobacter pylori SNT49 12367995 YP_005787691.1 CDS HPSNT_07975 NC_017376.1 1606516 1607277 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1606516..1607277) Helicobacter pylori SNT49 12367996 YP_005790805.1 CDS HPSNT_08064 NC_017380.1 185 346 R hypothetical protein complement(185..346) Helicobacter pylori SNT49 12284338 YP_005790806.1 CDS HPSNT_08069 NC_017380.1 971 1159 D hypothetical protein 971..1159 Helicobacter pylori SNT49 12284339 YP_005790807.1 CDS HPSNT_08074 NC_017380.1 1477 3021 D replication initiation protein A 1477..3021 Helicobacter pylori SNT49 12284340 YP_005790808.1 CDS HPSNT_08079 NC_017380.1 3128 >3253 R hypothetical protein complement(3128..>3253) Helicobacter pylori SNT49 12284341 HPSNT_t07982 tRNA HPSNT_t07982 NC_017376.1 4042 4117 R tRNA-Glu complement(4042..4117) Helicobacter pylori SNT49 12367803 HPSNT_t07984 tRNA HPSNT_t07984 NC_017376.1 4181 4257 R tRNA-Asp complement(4181..4257) Helicobacter pylori SNT49 12367805 HPSNT_t07986 tRNA HPSNT_t07986 NC_017376.1 4307 4382 R tRNA-Val complement(4307..4382) Helicobacter pylori SNT49 12367836 HPSNT_t07988 tRNA HPSNT_t07988 NC_017376.1 4424 4498 R tRNA-Glu complement(4424..4498) Helicobacter pylori SNT49 12366440 HPSNT_t07990 tRNA HPSNT_t07990 NC_017376.1 4509 4584 R tRNA-Lys complement(4509..4584) Helicobacter pylori SNT49 12366441 HPSNT_t07992 tRNA HPSNT_t07992 NC_017376.1 109586 109661 R tRNA-Val complement(109586..109661) Helicobacter pylori SNT49 12366529 HPSNT_t07994 tRNA HPSNT_t07994 NC_017376.1 127654 127745 D tRNA-Ser 127654..127745 Helicobacter pylori SNT49 12366546 HPSNT_t07996 tRNA HPSNT_t07996 NC_017376.1 266560 266634 R tRNA-Asn complement(266560..266634) Helicobacter pylori SNT49 12366681 HPSNT_t07998 tRNA HPSNT_t07998 NC_017376.1 289516 289591 R tRNA-Ala complement(289516..289591) Helicobacter pylori SNT49 12366705 HPSNT_t08000 tRNA HPSNT_t08000 NC_017376.1 370832 370908 D tRNA-Arg 370832..370908 Helicobacter pylori SNT49 12366781 HPSNT_t08002 tRNA HPSNT_t08002 NC_017376.1 418764 418851 R tRNA-Ser complement(418764..418851) Helicobacter pylori SNT49 12366826 HPSNT_t08004 tRNA HPSNT_t08004 NC_017376.1 471985 472062 R tRNA-Pro complement(471985..472062) Helicobacter pylori SNT49 12366884 HPSNT_t08006 tRNA HPSNT_t08006 NC_017376.1 789720 789796 R tRNA-Met complement(789720..789796) Helicobacter pylori SNT49 12367165 HPSNT_t08008 tRNA HPSNT_t08008 NC_017376.1 881089 881165 D tRNA-Arg 881089..881165 Helicobacter pylori SNT49 12367265 HPSNT_t08010 tRNA HPSNT_t08010 NC_017376.1 943147 943223 R tRNA-Met complement(943147..943223) Helicobacter pylori SNT49 12367329 HPSNT_t08012 tRNA HPSNT_t08012 NC_017376.1 943251 943325 R tRNA-Gln complement(943251..943325) Helicobacter pylori SNT49 12367330 HPSNT_t08014 tRNA HPSNT_t08014 NC_017376.1 998445 998519 D tRNA-Gly 998445..998519 Helicobacter pylori SNT49 12367374 HPSNT_t08016 tRNA HPSNT_t08016 NC_017376.1 998561 998647 D tRNA-Leu 998561..998647 Helicobacter pylori SNT49 12367375 HPSNT_t08018 tRNA HPSNT_t08018 NC_017376.1 998742 998816 D tRNA-Cys 998742..998816 Helicobacter pylori SNT49 12367376 HPSNT_t08020 tRNA HPSNT_t08020 NC_017376.1 998864 998951 D tRNA-Ser 998864..998951 Helicobacter pylori SNT49 12367377 HPSNT_t08022 tRNA HPSNT_t08022 NC_017376.1 1058622 1058698 R tRNA-Arg complement(1058622..1058698) Helicobacter pylori SNT49 12367429 HPSNT_t08024 tRNA HPSNT_t08024 NC_017376.1 1058716 1058792 R tRNA-Arg complement(1058716..1058792) Helicobacter pylori SNT49 12367430 HPSNT_t08026 tRNA HPSNT_t08026 NC_017376.1 1058852 1058928 R tRNA-His complement(1058852..1058928) Helicobacter pylori SNT49 12367431 HPSNT_t08028 tRNA HPSNT_t08028 NC_017376.1 1058996 1059073 R tRNA-Pro complement(1058996..1059073) Helicobacter pylori SNT49 12367432 HPSNT_t08030 tRNA HPSNT_t08030 NC_017376.1 1108772 1108856 R tRNA-Leu complement(1108772..1108856) Helicobacter pylori SNT49 12367477 HPSNT_t08032 tRNA HPSNT_t08032 NC_017376.1 1113640 1113716 D tRNA-Ile 1113640..1113716 Helicobacter pylori SNT49 12367483 HPSNT_t08034 tRNA HPSNT_t08034 NC_017376.1 1113732 1113807 D tRNA-Ala 1113732..1113807 Helicobacter pylori SNT49 12367484 HPSNT_t08036 tRNA HPSNT_t08036 NC_017376.1 1207624 1207701 R tRNA-Met complement(1207624..1207701) Helicobacter pylori SNT49 12367575 HPSNT_t08038 tRNA HPSNT_t08038 NC_017376.1 1237594 1237669 R tRNA-Trp complement(1237594..1237669) Helicobacter pylori SNT49 12367600 HPSNT_t08040 tRNA HPSNT_t08040 NC_017376.1 1239227 1239301 R tRNA-Thr complement(1239227..1239301) Helicobacter pylori SNT49 12367603 HPSNT_t08042 tRNA HPSNT_t08042 NC_017376.1 1239332 1239408 R tRNA-Gly complement(1239332..1239408) Helicobacter pylori SNT49 12367604 HPSNT_t08044 tRNA HPSNT_t08044 NC_017376.1 1239424 1239508 R tRNA-Tyr complement(1239424..1239508) Helicobacter pylori SNT49 12367605 HPSNT_t08046 tRNA HPSNT_t08046 NC_017376.1 1239536 1239611 R tRNA-Thr complement(1239536..1239611) Helicobacter pylori SNT49 12367606 HPSNT_t08048 tRNA HPSNT_t08048 NC_017376.1 1244801 1244887 R tRNA-Leu complement(1244801..1244887) Helicobacter pylori SNT49 12367613 HPSNT_t08050 tRNA HPSNT_t08050 NC_017376.1 1244941 1245027 R tRNA-Leu complement(1244941..1245027) Helicobacter pylori SNT49 12367615 HPSNT_t08052 tRNA HPSNT_t08052 NC_017376.1 1532549 1532624 D tRNA-Phe 1532549..1532624 Helicobacter pylori SNT49 12367919 HPSNT_r08054 rRNA HPSNT_r08054 NC_017376.1 1037255 1037372 R 5S ribosomal RNA complement(1037255..1037372) Helicobacter pylori SNT49 12367415 HPSNT_r08062 rRNA HPSNT_r08062 NC_017376.1 1037615 1040492 R 23S ribosomal RNA complement(1037615..1040492) Helicobacter pylori SNT49 12367416 HPSNT_r08058 rRNA HPSNT_r08058 NC_017376.1 1165815 1167322 R 16S ribosomal RNA complement(1165815..1167322) Helicobacter pylori SNT49 12367539 HPSNT_r08056 rRNA HPSNT_r08056 NC_017376.1 1404466 1404583 R 5S ribosomal RNA complement(1404466..1404583) Helicobacter pylori SNT49 12367794 HPSNT_r08064 rRNA HPSNT_r08064 NC_017376.1 1404826 1407703 R 23S ribosomal RNA complement(1404826..1407703) Helicobacter pylori SNT49 12367795 HPSNT_r08060 rRNA HPSNT_r08060 NC_017376.1 1437979 1439486 R 16S ribosomal RNA complement(1437979..1439486) Helicobacter pylori SNT49 12367827